BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048258
(504 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224099199|ref|XP_002311400.1| predicted protein [Populus trichocarpa]
gi|222851220|gb|EEE88767.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/504 (70%), Positives = 414/504 (82%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
ISFLGI+PSTRLYNAVIDALVKSNS+DLAYLKFQQMS D CKPDRFTYN+LIHG+C+IGV
Sbjct: 45 ISFLGITPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNMLIHGVCKIGV 104
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VDEALRLVKQMEG GY+ NVYTYT LI GFCNAKRV E FRV E MK RNV PNEAT+RS
Sbjct: 105 VDEALRLVKQMEGFGYSANVYTYTNLIYGFCNAKRVDEAFRVFETMKLRNVNPNEATIRS 164
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
LVHGVFRC+ P +AFEL+I F+E+EP+ +L C+TLL LS M EA A+LRK+G+RG
Sbjct: 165 LVHGVFRCVAPREAFELVIDFIEKEPVLGRLACDTLLCCLSEKCMPREAGALLRKLGERG 224
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
YLP+SSTF+ T+TCL+ GLD+NETCGILD FI RG K FS YL L+E LYKAGR +EGD
Sbjct: 225 YLPDSSTFNITMTCLLKGLDVNETCGILDKFIARGAKLGFSFYLALIETLYKAGRGMEGD 284
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
RYLN + KDRLVS+V SYNM+IDCFCK N+M++A + + M+DR ++PNLVTFNTLISGH
Sbjct: 285 RYLNQMVKDRLVSDVFSYNMLIDCFCKANVMNKAVMVFKVMQDRGVSPNLVTFNTLISGH 344
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CKD EVHK RELL MLLE G KPD FTF+S+IDCLCRA +F+DAL C SEMVEWG+ PN
Sbjct: 345 CKDGEVHKARELLQMLLELGLKPDIFTFSSIIDCLCRAQQFDDALGCFSEMVEWGISPNA 404
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TYNILIRSLC IGDV RS++L + M+ D ISPDI++FNALIQSFCRM K+EKAEK F S
Sbjct: 405 VTYNILIRSLCLIGDVGRSMKLLKDMRKDGISPDIFSFNALIQSFCRMGKVEKAEKMFVS 464
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M TLGL P+N++Y AL+KAL + GR DEAK+ F SME NGC PDS+T NLI E L +QG
Sbjct: 465 MSTLGLIPNNYTYGALVKALFELGRCDEAKKMFFSMEVNGCVPDSFTCNLISENLFKQGD 524
Query: 481 FEEAHDIVKTSKERGISFKSFPGL 504
FEE +I K ERGI+ KS P +
Sbjct: 525 FEELQNIAKICSERGIALKSIPAV 548
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%)
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI S+ R+ + E+ F + LG+ P Y+A+I AL+KS D A F M +
Sbjct: 25 LIGSWGRLGLAKYCEEIFGQISFLGITPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADN 84
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
C PD +T N+++ + + G +EA +VK + G S
Sbjct: 85 CKPDRFTYNMLIHGVCKIGVVDEALRLVKQMEGFGYS 121
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%)
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI S +G +F ++ I+P +NA+I + + N ++ A F M
Sbjct: 24 VLIGSWGRLGLAKYCEEIFGQISFLGITPSTRLYNAVIDALVKSNSLDLAYLKFQQMSAD 83
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+PD F+Y+ LI + K G DEA + ME G + + YT ++ R +EA
Sbjct: 84 NCKPDRFTYNMLIHGVCKIGVVDEALRLVKQMEGFGYSANVYTYTNLIYGFCNAKRVDEA 143
Query: 485 HDIVKTSKERGIS 497
+ +T K R ++
Sbjct: 144 FRVFETMKLRNVN 156
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/496 (66%), Positives = 400/496 (80%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
ISFLGISPSTRLYNAVIDALVKSNS+DLAYLKFQQMS D CKPDRFTYNILIHG+CR GV
Sbjct: 208 ISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGV 267
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VDEALRLVKQMEGLGY+PNV+TYTILIDGF NAK+V E FRVLE MK R V P+EAT+RS
Sbjct: 268 VDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRS 327
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+HGVFRC+ P+KAFEL I F+EREP+ Q+L C+TLL LS+ +MA EA A+L+K G G
Sbjct: 328 FIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIG 387
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ P+S+TF+ + CL+ G DLNE C ILD F+++G+K FSTYL L++ALY AG+ EG+
Sbjct: 388 HKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGN 447
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
Y N + KD L+ NV SYNMVIDCFCK +MMD+AT +EM+ + I PNLVTFNTLI G+
Sbjct: 448 HYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGY 507
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK E+ K+R+LLVMLLE GFKPD FTF+S+ID LCRA + EDAL C SEMV WG+ PN
Sbjct: 508 CKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNA 567
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TYNILI SLC IGDV RS++L +KMQ D I+PD+++FNALIQSFCRM K+E A+K F S
Sbjct: 568 VTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSS 627
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
ML+LGL PDN++Y A IK +SGRF+EAK+ FLSME NGC PDS+T N+IL+ LV+Q +
Sbjct: 628 MLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQ 687
Query: 481 FEEAHDIVKTSKERGI 496
FE A I KT E GI
Sbjct: 688 FEAAQKIAKTCSEWGI 703
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 140/356 (39%), Gaps = 35/356 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P + +N ++ L+K ++ + K TY LI + G V E
Sbjct: 386 IGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTE 445
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
QM G NV +Y ++ID FC + + + M+ + + PN T +L+
Sbjct: 446 GNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLID 505
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + + K+ +LL+ +E G+ P
Sbjct: 506 GYCKGGEICKSRDLLVMLLEH-----------------------------------GFKP 530
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF + L + + G + G+ P TY +L+ +L G + L
Sbjct: 531 DIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLL 590
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ D + +V S+N +I FC++ ++ A ++ M + P+ T+ I C+
Sbjct: 591 RKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQS 650
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
++ +EL + + G PD FT N ++D L + +FE A EWG+ N
Sbjct: 651 GRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWGILVN 706
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
F D+ + +CL R +++ L ++ G N ILI S +G
Sbjct: 143 FAKDQSVKGVLANCLYRKGPVVLSVELLKDIKASGYRINEELLCILIGSWGRLGLAKYCD 202
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
+F ++ ISP +NA+I + + N ++ A F M +PD F+Y+ LI +
Sbjct: 203 EIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGV 262
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+SG DEA + ME G +P+ +T ++++ + +EA +++T K R +S
Sbjct: 263 CRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVS 319
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 49/114 (42%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P +NA+I + + ++ A F M PD +TY I C+ G +EA
Sbjct: 597 GINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEA 656
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
L ME G P+ +T I++D + ++ + E + N A +
Sbjct: 657 KELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWGILVNFAAI 710
>gi|449503889|ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Cucumis sativus]
Length = 697
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 299/477 (62%), Positives = 374/477 (78%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I LG++P+TRLYNAV+DAL+KSNS+DLAYLKFQQMS C PDRFTYNILIHG+CR+GV
Sbjct: 220 IGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGV 279
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VDEALRL+KQMEGLGY PNV+TYTILIDGF NAKR E F+VL+ MKERNV PNEAT+RS
Sbjct: 280 VDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRS 339
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
LVHGVFRC+ P KAFELL+ F+ER+ +LVC+ +LY LSNNSMASEA L K G G
Sbjct: 340 LVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFLIKTGKEG 399
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
Y+P SSTF+ T+ C++ LDL TC + D ++ GVKP FSTYL L+EALYKAG+ G+
Sbjct: 400 YVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGN 459
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
RY++ + D L+SN+ SYNMVIDC CK MDRA+E+ R++ +R I+PN+VT+NTLI G
Sbjct: 460 RYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGF 519
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C++ + K +ELL MLLE F+PD FTFNS+ID LC+AH+ E+A C +EMVEW VPPN
Sbjct: 520 CRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNV 579
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITYNILI S CAIGDV+RS L ++M+ I PD ++FNALIQ + N+ +KAEK F S
Sbjct: 580 ITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDS 639
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
ML LG++PDN++Y ALIK+L KSGR D+A++ FLSM++NGC PDSYT +L +TL
Sbjct: 640 MLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSLFSDTLAH 696
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%)
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
++D L ++ E G+ IL S +G + +F ++ ++P +NA++
Sbjct: 178 SVDLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMD 237
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ + N ++ A F M + PD F+Y+ LI + + G DEA + ME G P
Sbjct: 238 ALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFP 297
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ +T ++++ R EA +++T KER +
Sbjct: 298 NVFTYTILIDGFFNAKRAGEAFKVLQTMKERNV 330
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 365 ILIRSLCAIGD---VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
+L+R+L G V S+ L Q+++ + L S+ R+ + F +
Sbjct: 161 VLVRNLHREGPDRPVLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQI 220
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
LGL P Y+A++ ALIKS D A F M + C PD +T N+++ + + G
Sbjct: 221 GLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVV 280
Query: 482 EEAHDIVKTSKERG 495
+EA ++K + G
Sbjct: 281 DEALRLMKQMEGLG 294
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 626 bits (1614), Expect = e-176, Method: Compositional matrix adjust.
Identities = 300/509 (58%), Positives = 380/509 (74%), Gaps = 5/509 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
ISFLG+SP+TRLYNA+IDALVKSNSIDLAYLKFQQM+ D C DRFTYN LIHG+C++GV
Sbjct: 170 ISFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGV 229
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VDEALRLV+QM+ G+ PNV+TYT+LI+GFC A RV E F V E MK+ V PNEATVR+
Sbjct: 230 VDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRA 289
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQK----LVCNTLLYRLSNNSMASEAAAILRK- 175
LVHGVFRC+DP KA ELL F++RE ++ L C+T+LY L+NNSMA E LR+
Sbjct: 290 LVHGVFRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRV 349
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
+G GY P +S F+ + CLV G +L ETC + + K+GVK YL L+E LYK
Sbjct: 350 LGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEW 409
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
EGDR + D L+SNV SYNM+I+CFC+ +MD A+E R+M+ R + PNLVTFNT
Sbjct: 410 REEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNT 469
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
LI+GHCKD + K R+LL LLE G KPD FTF+S++D LC+ R E+AL+C +EM+EWG
Sbjct: 470 LINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWG 529
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ PN + YNILIRSLC IGDVARS++L ++MQ + ISPD Y++NALIQ FCRMNK+EKA+
Sbjct: 530 INPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAK 589
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
K F SM GL PDN++YSA I+AL +SGR +EAK+ F SME NGC+PDSY NLI++ L
Sbjct: 590 KLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKIL 649
Query: 476 VQQGRFEEAHDIVKTSKERGISFKSFPGL 504
VQQ EEA +I++ +++GIS S P L
Sbjct: 650 VQQEYVEEAQNIIERCRQKGISLNSIPNL 678
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 3/161 (1%)
Query: 339 HRFEDAL---DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
HR AL D L E+ G L+ S +G S +F ++ +SP
Sbjct: 120 HRKGPALLSVDLLRELRNLGFRVTEDLLCALLASWGRLGLANYSAHVFCQISFLGLSPTT 179
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
+NALI + + N I+ A F M D F+Y+ LI + K G DEA +
Sbjct: 180 RLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQ 239
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M+ G P+ +T +++E R +EA + +T K+ G+
Sbjct: 240 MKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGV 280
>gi|449433429|ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g16890, mitochondrial-like
[Cucumis sativus]
Length = 688
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 294/477 (61%), Positives = 369/477 (77%), Gaps = 9/477 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I LG++P+TRLYNAV+DAL+KSNS+DLAYLKFQQMS C PDRFTYNILIHG+CR+GV
Sbjct: 220 IGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGV 279
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VDEALRL+KQMEGLGY PNV+TYTILIDGF NAKR E F+VL+ MKERNV PNEAT+RS
Sbjct: 280 VDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRS 339
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
LVHGVFRC+ P KAFELL+ F+ER+ +LVC+ +LY LSNNSMASEA
Sbjct: 340 LVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVM--------- 390
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ P SSTF+ T+ C++ LDL TC + D ++ GVKP FSTYL L+EALYKAG+ G+
Sbjct: 391 FXPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGN 450
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
RY++ + D L+SN+ SYNMVIDC CK MDRA+E+ R++ +R I+PN+VT+NTLI G
Sbjct: 451 RYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGF 510
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C++ + K +ELL MLLE F+PD FTFNS+ID LC+AH+ E+A C +EMVEW VPPN
Sbjct: 511 CRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNV 570
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITYNILI S CAIGDV+RS L ++M+ I PD ++FNALIQ + N+ +KAEK F S
Sbjct: 571 ITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDS 630
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
ML LG++PDN++Y ALIK+L KSGR D+A++ FLSM++NGC PDSYT +L +TL
Sbjct: 631 MLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSLFSDTLAH 687
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%)
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
++D L ++ E G+ IL S +G + +F ++ ++P +NA++
Sbjct: 178 SVDLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMD 237
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ + N ++ A F M + PD F+Y+ LI + + G DEA + ME G P
Sbjct: 238 ALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFP 297
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ +T ++++ R E +++T KER +
Sbjct: 298 NVFTYTILIDGFFNAKRAGETFKVLQTMKERNV 330
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 365 ILIRSLCAIGD---VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
+L+R+L G V S+ L Q+++ + L S+ R+ + F +
Sbjct: 161 VLVRNLHREGPDRPVLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQI 220
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
LGL P Y+A++ ALIKS D A F M + C PD +T N+++ + + G
Sbjct: 221 GLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVV 280
Query: 482 EEAHDIVKTSKERG 495
+EA ++K + G
Sbjct: 281 DEALRLMKQMEGLG 294
>gi|15228903|ref|NP_188314.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274022|sp|Q9LSQ2.1|PP239_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial; AltName: Full=Protein
PENTATRICOPEPTIDE REPEAT 40; Flags: Precursor
gi|7670019|dbj|BAA94973.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332642359|gb|AEE75880.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 282/473 (59%), Positives = 356/473 (75%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
ISFLG+ PSTRLYNAVIDALVKSNS+DLAYLKFQQM D CKPDRFTYNILIHG+C+ GV
Sbjct: 171 ISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGV 230
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VDEA+RLVKQME G PNV+TYTILIDGF A RV E + LE+M+ R + PNEAT+R+
Sbjct: 231 VDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRT 290
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
VHG+FRCL P KAFE+L+ FME++ Q++ + +LY LSNNSMA E LRK+G+RG
Sbjct: 291 FVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERG 350
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
Y+P+SSTF+ ++CL+ G DL ETC I D F+ RGVKP F+ YL+L++AL A R EGD
Sbjct: 351 YIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGD 410
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
RYL + D L+S+V SYN VIDC CK ++ A EM+DR I+PNLVTFNT +SG+
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+V K +L LL GFKPD TF+ +I+CLCRA +DA DC EM+EWG+ PN
Sbjct: 471 SVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNE 530
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITYNILIRS C+ GD RS++LF KM+ + +SPD+Y +NA IQSFC+M K++KAE+ +
Sbjct: 531 ITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKT 590
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
ML +GL+PDNF+YS LIKAL +SGR EA++ F S+E++GC PDSYT L+ E
Sbjct: 591 MLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEE 643
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 196/469 (41%), Gaps = 35/469 (7%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F Q+S KP YN +I + + +D A +QM G P+ +TY ILI G C
Sbjct: 168 FAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCK 227
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
V E R+++ M++ PN T L+ G +A + L R+ +
Sbjct: 228 KGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEAT 287
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
T ++ + +A +L ++ + +D + CL ET L
Sbjct: 288 IRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIG 347
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+RG P ST+ M L K VE R + D F
Sbjct: 348 ERGYIPDSSTFNAAMSCLLKGHDLVETCR-------------------IFDGFV------ 382
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
R + P + L+ + L + G +++N++I
Sbjct: 383 ----------SRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVI 432
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
DCLC+A R E+A L+EM + G+ PN +T+N + GDV + + +K+
Sbjct: 433 DCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFK 492
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PD+ TF+ +I CR +I+ A F ML G+ P+ +Y+ LI++ +G D + +
Sbjct: 493 PDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKL 552
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
F M++NG +PD Y N +++ + + ++A +++KT G+ +F
Sbjct: 553 FAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNF 601
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 70/141 (49%)
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
+++ L E+ + G + +LI S +G +F ++ + P +NA+I
Sbjct: 129 SMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVID 188
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ + N ++ A F M + G +PD F+Y+ LI + K G DEA + MEQ G P
Sbjct: 189 ALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRP 248
Query: 464 DSYTSNLILETLVQQGRFEEA 484
+ +T ++++ + GR +EA
Sbjct: 249 NVFTYTILIDGFLIAGRVDEA 269
>gi|297834586|ref|XP_002885175.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331015|gb|EFH61434.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 653
Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust.
Identities = 275/478 (57%), Positives = 355/478 (74%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
ISFLG+ PSTRLYNAVIDALVKSNS++LAY+KFQQM D CKPDRFTYNILIHG+C+ GV
Sbjct: 165 ISFLGMKPSTRLYNAVIDALVKSNSLNLAYVKFQQMRSDDCKPDRFTYNILIHGVCKKGV 224
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VDEA+RLVKQME G PNV+TYTILIDGF A R+ E + LE+M+ R + PNEAT+R+
Sbjct: 225 VDEAIRLVKQMEREGNRPNVFTYTILIDGFLIAGRIEEALKQLEMMQVRKLNPNEATIRT 284
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
LVHG+FRCL P +AFE+L+ FME+ + Q++ +T+LY LSNNSMA E A LRK G+RG
Sbjct: 285 LVHGIFRCLPPCEAFEVLLGFMEKNSILQRVAYDTVLYCLSNNSMAKETALFLRKTGERG 344
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
Y+P+SSTF+ + CL+ G L ETCGI D F+ RG KP F+ YL+L++AL A R GD
Sbjct: 345 YIPDSSTFNAAMNCLLKGHHLVETCGIFDCFVSRGAKPGFNGYLVLVQALLNAQRFSAGD 404
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
RYL + D L+S+V +YN VIDC CK + A EM+DR I+PNL+TFNT +SG+
Sbjct: 405 RYLKQMGGDGLLSSVYTYNAVIDCLCKARRTEHAAMFLTEMQDRGISPNLITFNTFLSGY 464
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+V K ++ LLE G PD TF+ +I+CLCRA +DA DC EM+EWG+ PN
Sbjct: 465 SAGGDVKKVHGVVEKLLEHGCNPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIKPNE 524
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITYNILIRS C+ GD RS++LF M+ +SP++Y +NA+IQSFC+M K++KAE+ +
Sbjct: 525 ITYNILIRSSCSTGDTGRSVKLFANMKESGLSPNLYAYNAIIQSFCKMKKVKKAEELLKT 584
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
ML +GL+PDNF+YS LIKAL +SGR EA++ F SME++GC PDSYT L+ E ++Q
Sbjct: 585 MLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSMERHGCVPDSYTKRLVEELDLRQ 642
>gi|357150350|ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Brachypodium distachyon]
Length = 684
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/496 (47%), Positives = 333/496 (67%), Gaps = 1/496 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ PST +YNA+I A V++ ++D AYL+FQQM D C+PD FTYN L+HG+C+ G++DE
Sbjct: 170 LGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCFTYNTLVHGVCQRGIIDE 229
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
ALRLV+QMEG G PNV+TYT+L+DGFCNA R + V + MKE+ V PNEA+ R+LVH
Sbjct: 230 ALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMKEKGVSPNEASYRTLVH 289
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G FRCL HKA+ +L ++ REP +LY LS N MA E + +KM RGYL
Sbjct: 290 GAFRCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKNEMAKEVVEVTKKMNSRGYLL 349
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+++ F V+C V L+L++ CG+LD F+K+G P F Y++++++L + + YL
Sbjct: 350 DNAIFGIVVSCAVKCLELSDLCGLLDDFVKKGGNPGFDVYIMVIKSLLGCKSSSKANHYL 409
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ D L+S V SYNMVIDCF K +D+A EI +EMR++ + PNLVTFNTLISG+ K
Sbjct: 410 KRMVLDGLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKGVLPNLVTFNTLISGYSKL 469
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
VH + +L ML+E G PD TF S+I+ LC H+ +DA DC +EM EWGV PN TY
Sbjct: 470 GNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDCFNEMAEWGVRPNAHTY 529
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+L+ +LC+ G V +++ L KM+ D I+PD Y+FNA I SFCRM K++KA F +ML
Sbjct: 530 NVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAPILSFCRMKKVDKARNIFNAMLR 589
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL-ILETLVQQGRFE 482
LG+ PDN++Y++LIKAL R DEAK+ L ME +G + ++ ++L I+ L + G+F
Sbjct: 590 LGVVPDNYTYNSLIKALCDERRIDEAKEILLLMESSGSSATTHHTHLPIVSALTKTGQFS 649
Query: 483 EAHDIVKTSKERGISF 498
+A ++ R +
Sbjct: 650 KAGQLMNKYNRRNVQL 665
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 74/146 (50%)
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
CG + + ++I R + A + +M G+ P+T YN LI + G V
Sbjct: 135 CGCEVSEELLRALIASWGRLGLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDT 194
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+ FQ+M AD PD +T+N L+ C+ I++A + M G+RP+ F+Y+ L+
Sbjct: 195 AYLRFQQMPADGCQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVD 254
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPD 464
+GR ++A F +M++ G +P+
Sbjct: 255 GFCNAGRPEDAVHVFDTMKEKGVSPN 280
>gi|125537003|gb|EAY83491.1| hypothetical protein OsI_38705 [Oryza sativa Indica Group]
Length = 696
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/486 (48%), Positives = 334/486 (68%), Gaps = 1/486 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ PST +YNA+I A V++ ++D AYL+FQQM D C+PDRFTYN L+HG+CR G+VDE
Sbjct: 182 LGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVCRRGIVDE 241
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+RLV+QMEG G PNV+TYT+L+DGFCNA RV E FR+L+ MKE+ V P+EAT R+LVH
Sbjct: 242 AVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVH 301
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
GVFRCL+ KA+ +L ++ E C+T+LY LS MA EA ++M RGYL
Sbjct: 302 GVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFAKRMSARGYLL 361
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+S+ F ++C + L++++ C +LD+FIK G P F Y++++++L + + YL
Sbjct: 362 DSTAFGIVMSCSLKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYL 421
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
H+ L+S+V SYNMVIDCF K +D+A EI +EM+D+ PNLVTFNTLISG+ K
Sbjct: 422 GHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKL 481
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
VH + +L ML+E GF PD TF S+ID LC H+ +DA C EM EWGV PN TY
Sbjct: 482 GNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTY 541
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+L+ +LC+ G V +++ L KM+ D ++PD Y+FNALI SFCRM K++KAE F M+
Sbjct: 542 NVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVR 601
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL-ILETLVQQGRFE 482
G+ PD+++Y++LIKAL R ++AK+ + E++GC+ + S I+ L + G+F
Sbjct: 602 FGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFS 661
Query: 483 EAHDIV 488
EA +++
Sbjct: 662 EAGELM 667
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%)
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
L+ + V + L+ + CG + + ++++ R A + +M
Sbjct: 123 ALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRL 182
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G+ P+T YN LI + G V + FQ+M AD PD +T+N+L+ CR +++A
Sbjct: 183 GLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVCRRGIVDEA 242
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ M G+RP+ F+Y+ L+ +GR +EA + M++ G P T
Sbjct: 243 VRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEAT 295
>gi|77556780|gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 696
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/486 (48%), Positives = 333/486 (68%), Gaps = 1/486 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ PST +YNA+I A V++ ++D AYL+FQQM D C+PD FTYN L+HG+CR G+VDE
Sbjct: 182 LGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDE 241
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+RLV+QMEG G PNV+TYT+L+DGFCNA RV E FR+L+ MKE+ V P+EAT R+LVH
Sbjct: 242 AVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVH 301
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
GVFRCL+ KA+ +L ++ E C+T+LY LS MA EA ++M RGYL
Sbjct: 302 GVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSARGYLL 361
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+S+ F ++C + L++++ C +LD+FIK G P F Y++++++L + + YL
Sbjct: 362 DSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYL 421
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
H+ L+S+V SYNMVIDCF K +D+A EI +EM+D+ PNLVTFNTLISG+ K
Sbjct: 422 GHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKL 481
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
VH + +L ML+E GF PD TF S+ID LC H+ +DA C EM EWGV PN TY
Sbjct: 482 GNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTY 541
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+L+ +LC+ G V +++ L KM+ D ++PD Y+FNALI SFCRM K++KAE F M+
Sbjct: 542 NVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVR 601
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL-ILETLVQQGRFE 482
G+ PD+++Y++LIKAL R ++AK+ + E++GC+ + S I+ L + G+F
Sbjct: 602 FGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFS 661
Query: 483 EAHDIV 488
EA +++
Sbjct: 662 EAGELM 667
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%)
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
L+ + V + L+ + CG + + ++++ R A + +M
Sbjct: 123 ALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRL 182
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G+ P+T YN LI + G V + FQ+M AD PD +T+N+L+ CR +++A
Sbjct: 183 GLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEA 242
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ M G+RP+ F+Y+ L+ +GR +EA + M++ G P T
Sbjct: 243 VRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEAT 295
>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 674
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/482 (48%), Positives = 319/482 (66%), Gaps = 1/482 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ PST +YNAVI A V++ ++D AYL+FQQM D C+PD FTYN L+HG+CR G+VDE
Sbjct: 174 LGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDE 233
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
ALRLVKQME G PNV TYT+L+DGFCNA RV E VLE MKE+ V EAT RSLVH
Sbjct: 234 ALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVH 293
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G FRCL+ +A+ +L ++E +P + +TLLY LS N M EA + +KM RGYL
Sbjct: 294 GAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLL 353
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
S+TF + C V L+ ++ C ++D FIK+G F Y++++++ + + ++Y
Sbjct: 354 GSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYF 413
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + D L+S+V SYN+VIDCF K ++RA E + M++ +PNLVTFNTLI+G+ K
Sbjct: 414 SQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKL 473
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
VH + L M++E G PD TF S+ID LC H+ +DA +C SEM EWGV PN TY
Sbjct: 474 GNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTY 533
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+LI LC+ G V++++ L KM+ D I+PD Y+FNA I SFCRM KIEKA+K F M
Sbjct: 534 NVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSR 593
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC-NPDSYTSNLILETLVQQGRFE 482
G+ PD+++Y+ALIKAL R DEAK+ L+ME C +T ++ L + GRF
Sbjct: 594 YGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVVGALTKMGRFS 653
Query: 483 EA 484
EA
Sbjct: 654 EA 655
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/498 (22%), Positives = 197/498 (39%), Gaps = 37/498 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S L A++++ + A+ F Q+ +P YN +I R G VD A
Sbjct: 140 GCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAA 199
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+QM G P+ +TY L+ G C V E R
Sbjct: 200 YLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALR----------------------- 236
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMGDRGYLP 183
L++ MER + +V T+L N S EA +L +M ++G
Sbjct: 237 -------------LVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSA 283
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+T+ V L+ +L +I+ Y L+ L K D E
Sbjct: 284 TEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELA 343
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ K + ++++VI C KV E+ + + + +I +
Sbjct: 344 KKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRC 403
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ K + ++ G ++N +IDC +A E AL+ + M E G PN +T+
Sbjct: 404 KDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTF 463
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI +G+V + + + + PD+ TF +LI C ++++ A F M
Sbjct: 464 NTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSE 523
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+RP+ +Y+ LI L +G +A + M+ +G PD+Y+ N + + + + E+
Sbjct: 524 WGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEK 583
Query: 484 AHDIVKTSKERGISFKSF 501
A + G+S S+
Sbjct: 584 AQKLFNDMSRYGVSPDSY 601
>gi|414868428|tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 683
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/479 (48%), Positives = 317/479 (66%), Gaps = 1/479 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ PST +YNAVI A V++ ++D AYL+FQQM D C+PD FTYN L+HG+CR G+VDE
Sbjct: 174 LGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDE 233
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
ALRLVKQME G PNV TYT+L+DGFCNA RV E VLE MKE+ V EAT RSLVH
Sbjct: 234 ALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVH 293
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G FRCL+ +A+ +L ++E +P + +TLLY LS N M EA + +KM RGYL
Sbjct: 294 GAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLL 353
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
S+TF + C V L+ ++ C ++D FIK+G F Y++++++ + + ++Y
Sbjct: 354 GSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYF 413
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + D L+S+V SYN+VIDCF K ++RA E + M++ +PNLVTFNTLI+G+ K
Sbjct: 414 SQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKL 473
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
VH + L M++E G PD TF S+ID LC H+ +DA +C SEM EWGV PN TY
Sbjct: 474 GNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTY 533
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+LI LC+ G V++++ L KM+ D I+PD Y+FNA I SFCRM KIEKA+K F M
Sbjct: 534 NVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSR 593
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC-NPDSYTSNLILETLVQQGRF 481
G+ PD+++Y+ALIKAL R DEAK+ L+ME C +T ++ L + GRF
Sbjct: 594 YGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVVGALTKMGRF 652
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 112/498 (22%), Positives = 197/498 (39%), Gaps = 37/498 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S L A++++ + A+ F Q+ +P YN +I R G VD A
Sbjct: 140 GCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAA 199
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+QM G P+ +TY L+ G C V E R
Sbjct: 200 YLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALR----------------------- 236
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMGDRGYLP 183
L++ MER + +V T+L N S EA +L +M ++G
Sbjct: 237 -------------LVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSA 283
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+T+ V L+ +L +I+ Y L+ L K D E
Sbjct: 284 TEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELA 343
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ K + ++++VI C KV E+ + + + +I +
Sbjct: 344 KKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRC 403
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ K + ++ G ++N +IDC +A E AL+ + M E G PN +T+
Sbjct: 404 KDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTF 463
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI +G+V + + + + PD+ TF +LI C ++++ A F M
Sbjct: 464 NTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSE 523
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+RP+ +Y+ LI L +G +A + M+ +G PD+Y+ N + + + + E+
Sbjct: 524 WGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEK 583
Query: 484 AHDIVKTSKERGISFKSF 501
A + G+S S+
Sbjct: 584 AQKLFNDMSRYGVSPDSY 601
>gi|115489040|ref|NP_001067007.1| Os12g0557800 [Oryza sativa Japonica Group]
gi|113649514|dbj|BAF30026.1| Os12g0557800 [Oryza sativa Japonica Group]
Length = 682
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 228/486 (46%), Positives = 322/486 (66%), Gaps = 15/486 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ PST +Y A YL+FQQM D C+PD FTYN L+HG+CR G+VDE
Sbjct: 182 LGLRPSTAVYTA--------------YLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDE 227
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+RLV+QMEG G PNV+TYT+L+DGFCNA RV E FR+L+ MKE+ V P+EAT R+LVH
Sbjct: 228 AVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVH 287
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
GVFRCL+ KA+ +L ++ E C+T+LY LS MA EA ++M RGYL
Sbjct: 288 GVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSARGYLL 347
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+S+ F ++C + L++++ C +LD+FIK G P F Y++++++L + + YL
Sbjct: 348 DSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYL 407
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
H+ L+S+V SYNMVIDCF K +D+A EI +EM+D+ PNLVTFNTLISG+ K
Sbjct: 408 GHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKL 467
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
VH + +L ML+E GF PD TF S+ID LC H+ +DA C EM EWGV PN TY
Sbjct: 468 GNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTY 527
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+L+ +LC+ G V +++ L KM+ D ++PD Y+FNALI SFCRM K++KAE F M+
Sbjct: 528 NVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVR 587
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL-ILETLVQQGRFE 482
G+ PD+++Y++LIKAL R ++AK+ + E++GC+ + S I+ L + G+F
Sbjct: 588 FGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFS 647
Query: 483 EAHDIV 488
EA +++
Sbjct: 648 EAGELM 653
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 21/153 (13%)
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L+ +L G V S RL +++ AL++S+ R+ A + F M LG
Sbjct: 124 LVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRLG 183
Query: 426 LRP---------------------DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
LRP D+F+Y++L+ + + G DEA + ME G P+
Sbjct: 184 LRPSTAVYTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPN 243
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+T ++++ GR EEA ++ KE+G++
Sbjct: 244 VFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVA 276
>gi|293332227|ref|NP_001169164.1| uncharacterized protein LOC100383014 [Zea mays]
gi|223975267|gb|ACN31821.1| unknown [Zea mays]
Length = 469
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/450 (48%), Positives = 293/450 (65%), Gaps = 1/450 (0%)
Query: 36 MSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR 95
M D C+PD FTYN L+HG+CR G+VDEALRLVKQME G PNV TYT+L+DGFCNA R
Sbjct: 1 MPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASR 60
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT 155
V E VLE MKE+ V EAT RSLVHG FRCL+ +A+ +L ++E +P + +T
Sbjct: 61 VEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHT 120
Query: 156 LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRG 215
LLY LS N M EA + +KM RGYL S+TF + C V L+ ++ C ++D FIK+G
Sbjct: 121 LLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKG 180
Query: 216 VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT 275
F Y++++++ + + ++Y + + D L+S+V SYN+VIDCF K ++RA
Sbjct: 181 GNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERAL 240
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
E + M++ +PNLVTFNTLI+G+ K VH + L M++E G PD TF S+ID L
Sbjct: 241 ETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGL 300
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
C H+ +DA +C SEM EWGV PN TYN+LI LC+ G V++++ L KM+ D I+PD
Sbjct: 301 CHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDA 360
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
Y+FNA I SFCRM KIEKA+K F M G+ PD+++Y+ALIKAL R DEAK+ L+
Sbjct: 361 YSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILA 420
Query: 456 MEQNGC-NPDSYTSNLILETLVQQGRFEEA 484
ME C +T ++ L + GRF EA
Sbjct: 421 MESISCIGTKQHTYWPVVGALTKMGRFSEA 450
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 168/390 (43%), Gaps = 2/390 (0%)
Query: 113 PNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAA 171
P+ T +LVHGV R +A L ++ MER + +V T+L N S EA
Sbjct: 8 PDCFTYNTLVHGVCRRGIVDEALRL-VKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVC 66
Query: 172 ILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY 231
+L +M ++G +T+ V L+ +L +I+ Y L+ L
Sbjct: 67 VLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLS 126
Query: 232 KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
K D E + K + ++++VI C KV E+ + +
Sbjct: 127 KNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFD 186
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
+ +I + ++ K + ++ G ++N +IDC +A E AL+ + M
Sbjct: 187 MYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVM 246
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
E G PN +T+N LI +G+V + + + + PD+ TF +LI C +++
Sbjct: 247 QESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQL 306
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
+ A F M G+RP+ +Y+ LI L +G +A + M+ +G PD+Y+ N
Sbjct: 307 DDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAP 366
Query: 472 LETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ + + + E+A + G+S S+
Sbjct: 367 ILSFCRMRKIEKAQKLFNDMSRYGVSPDSY 396
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 7/248 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ S YN VID K+ ++ A + M P+ T+N LI+G ++G V +A
Sbjct: 215 GLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDA 274
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+K + G P+V T+T LIDG C+ ++ + F M E V PN T L+HG
Sbjct: 275 KAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHG 334
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ KA ELL + M+ + +T N + +A + M G P
Sbjct: 335 LCSAGHVSKAIELLNK-MKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSP 393
Query: 184 ESSTFDYTVTCLVTGLDLNETCGI---LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+S T++ + L ++E I +++ G K TY ++ AL K GR E
Sbjct: 394 DSYTYNALIKALCDERRVDEAKEIILAMESISCIGTKQH--TYWPVVGALTKMGRFSEAG 451
Query: 241 RYLNHVFK 248
++N + +
Sbjct: 452 MFMNKLHR 459
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
+Y +I + ++ I A F QM D +YNI+I + G V+ AL +K M
Sbjct: 187 MYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVM 246
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
+ G++PN+ T+ LI+G+ V + L+++ E + P+ T SL+ G+
Sbjct: 247 QESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQL 306
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
AF E N L++ L + S+A +L KM G P++ +F+
Sbjct: 307 DDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAP 366
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
+ + + + + + GV P TY L++AL
Sbjct: 367 ILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKAL 405
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G RPD F+Y+ L+ + + G DEA + ME+ G P+ T ++++ R EEA
Sbjct: 5 GCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEA 64
Query: 485 HDIVKTSKERGIS 497
+++ KE+G+S
Sbjct: 65 VCVLERMKEKGVS 77
>gi|125579703|gb|EAZ20849.1| hypothetical protein OsJ_36487 [Oryza sativa Japonica Group]
Length = 607
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/361 (50%), Positives = 246/361 (68%), Gaps = 3/361 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ PST +YNA+I A V++ ++D AYL+FQQM D C+PD FTYN L+HG+CR G+VDE
Sbjct: 182 LGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDE 241
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+RLV+QMEG G PNV+TYT+L+DGFCNA RV E FR+L+ MKE+ V P+EAT R+LVH
Sbjct: 242 AVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVH 301
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
GVFRCL+ KA+ +L ++ E C+T+LY LS MA EA ++M RGYL
Sbjct: 302 GVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSARGYLL 361
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+S+ F ++C + L++++ C +LD+FIK G P F Y++++++L + + YL
Sbjct: 362 DSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYL 421
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
H+ L+S+V SYNMVIDCF K +D+A EI +EM+D+ PNLVTFNTLISG+ K
Sbjct: 422 GHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKL 481
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG---VPPNT 360
VH + +L ML+E GF PD TF S+ID LC H+ +DA C EM EW VP N
Sbjct: 482 GNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWDEGFVPSNA 541
Query: 361 I 361
I
Sbjct: 542 I 542
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 172/444 (38%), Gaps = 35/444 (7%)
Query: 15 AVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGL 74
A++ AL + + L+ ++ C+ L+ R+G+ A + QM L
Sbjct: 123 ALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRL 182
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
G P+ Y LI A V + + M P+ T SLVHGV R
Sbjct: 183 GLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCR------- 235
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
+ EA ++R+M G P T+ V
Sbjct: 236 ----------------------------RGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDG 267
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
+ E +LD ++GV P +TY L+ +++ + R L+ +
Sbjct: 268 FCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLH 327
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
++ + ++ C K +M A E + M R + F ++S K EV ELL
Sbjct: 328 PSACHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLD 387
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
++ G P + +I L F A L MV G+ + ++YN++I G
Sbjct: 388 SFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAG 447
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
V ++ + ++MQ P++ TFN LI + ++ + A+ ++ G PD +++
Sbjct: 448 AVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFT 507
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQ 458
+LI L + + D+A F M +
Sbjct: 508 SLIDGLCNTHQLDDAFVCFEEMAE 531
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 147/351 (41%), Gaps = 5/351 (1%)
Query: 147 LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
++++LVC L+ +A A + +M G P ++ ++ + V ++
Sbjct: 151 VSEELVC-ALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYL 209
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
G +P TY L+ + + G E R + + + + NV +Y M++D FC
Sbjct: 210 RFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFC 269
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL--ECGFKPD 324
++ A + +M+++ +AP+ T+ TL+ G + E K +L L E P
Sbjct: 270 NAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPS 329
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
++M+ CL + ++A++ M G ++ + I++ +V+ L
Sbjct: 330 --ACHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLD 387
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+ +P + +I+S KA M+ GL SY+ +I +K+G
Sbjct: 388 SFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAG 447
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
D+A++ M+ G P+ T N ++ + G A ++K E G
Sbjct: 448 AVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHG 498
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%)
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
L+ + V + L+ + CG + + ++++ R A + +M
Sbjct: 123 ALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRL 182
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G+ P+T YN LI + G V + FQ+M AD PD +T+N+L+ CR +++A
Sbjct: 183 GLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEA 242
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ M G+RP+ F+Y+ L+ +GR +EA + M++ G P T
Sbjct: 243 VRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEAT 295
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%)
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L+ S +G + +F +M + P +NALI + R ++ A F M G
Sbjct: 159 LVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADG 218
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
RPD+F+Y++L+ + + G DEA + ME G P+ +T ++++ GR EEA
Sbjct: 219 CRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAF 278
Query: 486 DIVKTSKERGIS 497
++ KE+G++
Sbjct: 279 RMLDKMKEKGVA 290
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 66/131 (50%)
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L+ +L G V S RL +++ AL++S+ R+ A + F M LG
Sbjct: 124 LVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRLG 183
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
LRP Y+ALI A +++G D A F M +GC PD +T N ++ + ++G +EA
Sbjct: 184 LRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAV 243
Query: 486 DIVKTSKERGI 496
+V+ + GI
Sbjct: 244 RLVRQMEGEGI 254
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 148/482 (30%), Positives = 251/482 (52%), Gaps = 2/482 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P + YN +I+ L KS+ +D A ++M + P+ F+YN ++HG C+ V+ AL L
Sbjct: 42 PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 101
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++QM G P+V +YT +I+G C +V E RV++ M +R PN T +LV G R
Sbjct: 102 LEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 161
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS- 186
D A EL+ + ER + N +++ L + A + ++M + G P
Sbjct: 162 VGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVF 221
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ V LV +++ C +++ + +G P TY L+ L KAG+ E L +
Sbjct: 222 TYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM 281
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ N+ +YN +ID CK+ +D A + EM D PN+VT+ L+ CK +
Sbjct: 282 TRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKA 341
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
L+ +++E G+ P+ FT+NS++D C+ E A LS M++ G PN ++YN +
Sbjct: 342 EDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTV 401
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I LC V + L ++M ++ PDI TFN +I + C+ +++ A + F + G
Sbjct: 402 IAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGC 461
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSM-EQNGCNPDSYTSNLILETLVQQGRFEEAH 485
P+ +Y++L+ L KS RFD+A+ M + GC+PD T N +++ L + R + A+
Sbjct: 462 TPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAY 521
Query: 486 DI 487
+
Sbjct: 522 KL 523
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 133/477 (27%), Positives = 235/477 (49%), Gaps = 1/477 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P Y+ ++D+LVKS +D A + M C P+ TY+ L+HG+C+ G +DEA L
Sbjct: 218 PDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATAL 277
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+++M G +PN+ TY +IDG C R+ E + +LE M + PN T L+ +
Sbjct: 278 LQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCK 337
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
C A L+ +E+ + N+LL A +L M +G +P +
Sbjct: 338 CGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVS 397
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + L ++E +L+ + P T+ +++A+ K R N +
Sbjct: 398 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 457
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM-RDRDIAPNLVTFNTLISGHCKDAEV 306
+ N+ +YN ++ CK D+A + REM R + +P+++T+NT+I G CK V
Sbjct: 458 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRV 517
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ +L + +L G PD T++ +I LC+ ++A + L M++ G P ITY L
Sbjct: 518 DRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTL 577
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I C G++ ++L + Q + + PD+ TF+ I + ++ +A + +ML GL
Sbjct: 578 IDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGL 637
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
PD +Y+ L+K + R ++A F M Q GC PD+ T ++ LV + +++
Sbjct: 638 VPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKD 694
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 142/529 (26%), Positives = 255/529 (48%), Gaps = 37/529 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y VI+ L K + +D A +M C+P+ TY L+ G CR+G +D A
Sbjct: 109 GCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGA 168
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEA-TVRSLVH 123
+ LV++M GY PN TY ++ G C+ +++ ++ + M+E CP + T ++V
Sbjct: 169 VELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVD 228
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + A L+ + + + ++LL+ L EA A+L++M G P
Sbjct: 229 SLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSP 288
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + ++E +L+ + G +P TY +L++A K G+ + +
Sbjct: 289 NIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLV 348
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + V N+ +YN ++D FCK + ++RA ++ M + PN+V++NT+I+G CK
Sbjct: 349 EVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKA 408
Query: 304 AEVHK-----------------------------------TRELLVMLLECGFKPDKFTF 328
+VH+ EL ++ E G P+ T+
Sbjct: 409 TKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTY 468
Query: 329 NSMIDCLCRAHRFEDALDCLSEMV-EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
NS++ LC++ RF+ A L EM + G P+ ITYN +I LC V R+ +LF +M
Sbjct: 469 NSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQML 528
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+D ++PD T++ +I S C+ +++A ML G P +Y LI K+G D
Sbjct: 529 SDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLD 588
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+A + + G PD T ++ ++ L ++GR +A ++++T G+
Sbjct: 589 KALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGL 637
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 243/493 (49%), Gaps = 2/493 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMS-VDQCKPDRFTYNILIHGICRIGVVDE 63
G P+ YN ++ L +D A F++M C PD FTY+ ++ + + G VD+
Sbjct: 179 GYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDD 238
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A RLV+ M G +PNV TY+ L+ G C A ++ E +L+ M PN T +++
Sbjct: 239 ACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIID 298
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + +A+ LL ++ + LL A +A ++ M ++GY+P
Sbjct: 299 GHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVP 358
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + ++ C +L + I++G P +Y ++ L KA + EG L
Sbjct: 359 NLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLL 418
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + V ++ ++N +ID CK +D A E+ +++ PNLVT+N+L+ G CK
Sbjct: 419 EQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKS 478
Query: 304 AEVHKTRELL-VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ LL M + G PD T+N++ID LC++ R + A +M+ G+ P+ +T
Sbjct: 479 RRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVT 538
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y+I+I SLC + + + + M + P T+ LI FC+ ++KA + +L
Sbjct: 539 YSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLL 598
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ G PD ++S I L K GR +A + +M + G PD+ T N +L+ R E
Sbjct: 599 SKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTE 658
Query: 483 EAHDIVKTSKERG 495
+A D+ + ++ G
Sbjct: 659 DAVDLFEVMRQCG 671
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 165/357 (46%), Gaps = 2/357 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN+++D K + ++ A M C P+ +YN +I G+C+ V E
Sbjct: 355 GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEG 414
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L++QM P++ T+ +ID C RV + + +++E PN T SLVHG
Sbjct: 415 VLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHG 474
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +A LL ++ + ++ NT++ L + A + +M G P
Sbjct: 475 LCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAP 534
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ ++ L ++E +L+ +K G P TY L++ K G + L
Sbjct: 535 DDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEIL 594
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +V ++++ ID K + +A E+ M + P+ VT+NTL+ G C
Sbjct: 595 QLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDA 654
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE-MVEWGVPPN 359
+ +L ++ +CG +PD T+ +++ L ++D L +S+ MV+ G N
Sbjct: 655 SRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLN 711
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/491 (29%), Positives = 250/491 (50%), Gaps = 3/491 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P +YN VI AL K+ + A F+ M +C+ + T+ I+I G+C+ + EA
Sbjct: 89 GPVPDAAIYNFVIHALCKARNTAKALDYFRSM---ECEKNVITWTIMIDGLCKANRLPEA 145
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+M+ G PN +TY +LI+GFC +V + +L+ MKE + PN T +++HG
Sbjct: 146 TTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHG 205
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R A++L + +E + + NTLL L N + EA +L +M +RG P+
Sbjct: 206 FCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPD 265
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++D + L ++ + + P Y L+ L KAGR E +
Sbjct: 266 KFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFE 325
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ +V ++ ++D CK + + A ++ M DR+ PN++T+++LI G CK
Sbjct: 326 KMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTG 385
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V +E+ ++ G +P+ T+NS+I C + + AL + EM G P+ ITYN
Sbjct: 386 QVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYN 445
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI LC G + RLF M+A +PD+ T++ LI FC++ +I+ A F ML
Sbjct: 446 TLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQ 505
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ PD ++S L++ +G D+A++ M + C+PD YT +++ + GR EA
Sbjct: 506 AVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEA 565
Query: 485 HDIVKTSKERG 495
++K +RG
Sbjct: 566 RRVLKRMAKRG 576
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 233/486 (47%), Gaps = 2/486 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y+ ++ L K+ ID+A F+ S C PD Y+ LI G+C+ G +DEA
Sbjct: 261 GLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEA 320
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L ++M P+V T+T L+DG C R+ E +VLE M++RN PN T SL+ G
Sbjct: 321 CKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDG 380
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A E+ R + R + N+L++ + A ++ +M G LP+
Sbjct: 381 LCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPD 440
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L E + + P TY L+ K R +
Sbjct: 441 IITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFD 500
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K ++ +V +++ +++ +C ++D A + EM D +P++ T+ +L+ G CK
Sbjct: 501 DMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVG 560
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + R +L + + G +P+ T+ ++ID CRA + A L EMV GV PN ITY
Sbjct: 561 RMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYR 620
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADR-ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI C GD+ + ++ ++++ D D++ + ++ CR ++ A + ++
Sbjct: 621 SLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQ 680
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME-QNGCNPDSYTSNLILETLVQQGRFE 482
G P + Y ALI+ L + +A + M P++ +++ L ++GR E
Sbjct: 681 SGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHE 740
Query: 483 EAHDIV 488
EA+ +
Sbjct: 741 EANALA 746
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 138/536 (25%), Positives = 246/536 (45%), Gaps = 43/536 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ Y+ VI + +D AY F+QM + C P+ TYN L+ G+CR G++DEA
Sbjct: 191 GLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEA 250
Query: 65 LRLVKQMEGLGY-----------------------------------APNVYTYTILIDG 89
L+ +M G P+V Y+ LI G
Sbjct: 251 YELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAG 310
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C A R+ E ++ E M+E + P+ T +L+ G+ + +A ++L +R
Sbjct: 311 LCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPN 370
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT--CLVTGLDLNETCGI 207
+ ++L+ L +A + ++M RG P T++ + C+ G+D +
Sbjct: 371 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVD--SALLL 428
Query: 208 LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
++ G P TY L++ L K GR E +R + +V +Y+ +I FCK
Sbjct: 429 MEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCK 488
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+ +D A + +M + + P++VTF+TL+ G+C V LL ++ PD +T
Sbjct: 489 LERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYT 548
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+ S++D C+ R +A L M + G PN +TY LI + C G + RL ++M
Sbjct: 549 YTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMV 608
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM-LTLGLRPDNFSYSALIKALIKSGRF 446
+ + P++ T+ +LI FC +E+A K + + D F+Y ++ L ++GR
Sbjct: 609 GNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRM 668
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFP 502
A + +++Q+G P ++ L Q +A +++ +E +S KS P
Sbjct: 669 SAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVL---EEMTLSRKSRP 721
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 210/436 (48%), Gaps = 39/436 (8%)
Query: 62 DEALRLVKQM-EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
D ALR + G+ NVYTY L + A+R+ E +L+ + PN T
Sbjct: 5 DAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAV 64
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ + D KA EL L +M + G
Sbjct: 65 VIQGLCKSGDLDKACEL-----------------------------------LEEMRESG 89
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P+++ +++ + L + T LD F + T+ ++++ L KA R E
Sbjct: 90 PVPDAAIYNFVIHALCKARN---TAKALDYFRSMECEKNVITWTIMIDGLCKANRLPEAT 146
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
Y + K V N +YN++I+ FCKV+ + RA + +EM++ +APN+VT++T+I G
Sbjct: 147 TYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGF 206
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ +V +L ++E G P+ T+N+++ LCR ++A + L EM E G+ P+
Sbjct: 207 CRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDK 266
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+Y+ L+ LC G + +L++F+ PD+ ++ LI C+ ++++A K F
Sbjct: 267 FSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEK 326
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M PD +++AL+ L K R EA+Q +ME C P+ T + +++ L + G+
Sbjct: 327 MRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQ 386
Query: 481 FEEAHDIVKTSKERGI 496
+A ++ K RGI
Sbjct: 387 VRDAQEVFKRMIVRGI 402
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 217/446 (48%), Gaps = 40/446 (8%)
Query: 29 AYLKFQQMSVDQCKPDR--FTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTIL 86
A L+F + Q D +TYN L + R +DE ++K G PNV+TY ++
Sbjct: 6 AALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVV 65
Query: 87 IDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREP 146
I G C + + + +LE M+E P+ A ++H + + + KA + R ME E
Sbjct: 66 IQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYF-RSMECE- 123
Query: 147 LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
+ ++ L + EA KM +G +P T++
Sbjct: 124 -KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNV---------------- 166
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+++ F K V YLLL E + ++G L NV +Y+ VI FC
Sbjct: 167 LINGFCK--VHKVHRAYLLLKE-MKESG----------------LAPNVVTYSTVIHGFC 207
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
+ +D A ++ R+M + PNLVT+NTL+SG C++ + + ELL + E G +PDKF
Sbjct: 208 RQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKF 267
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
++++++ LC+ + + AL + PP+ + Y+ LI LC G + + +LF+KM
Sbjct: 268 SYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKM 327
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ + PD+ TF AL+ C+ +++++A++ +M P+ +YS+LI L K+G+
Sbjct: 328 RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQV 387
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLIL 472
+A++ F M G P+ T N ++
Sbjct: 388 RDAQEVFKRMIVRGIEPNVVTYNSLI 413
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 121/248 (48%), Gaps = 3/248 (1%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV +YN + + + +D I + I PN+ T+ +I G CK ++ K ELL
Sbjct: 23 NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ E G PD +N +I LC+A ALD M N IT+ I+I LC
Sbjct: 83 EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---CEKNVITWTIMIDGLCKA 139
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
+ + F KM+ P+ +T+N LI FC+++K+ +A M GL P+ +Y
Sbjct: 140 NRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTY 199
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
S +I + + D A + F M +NGC P+ T N +L L + G +EA++++ +E
Sbjct: 200 STVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRE 259
Query: 494 RGISFKSF 501
RG+ F
Sbjct: 260 RGLQPDKF 267
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 3/178 (1%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
GF + +T+N + + L RA R ++ L G+ PN TY ++I+ LC GD+ ++
Sbjct: 19 GFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKA 78
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
L ++M+ PD +N +I + C+ KA F SM + +++ +I
Sbjct: 79 CELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM---ECEKNVITWTIMIDG 135
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
L K+ R EA F M++ G P+ +T N+++ + + A+ ++K KE G++
Sbjct: 136 LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLA 193
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 156/514 (30%), Positives = 255/514 (49%), Gaps = 24/514 (4%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ +N++++ L ++ +D A+ F M C D TYNIL+ G+C++ + EA R
Sbjct: 308 PNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRH 367
Query: 68 VKQMEGL-GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE-RNVCPNEATVRSLVHGV 125
V+ M G +PNV T++ LI G CNA RV + + V E M + PN T L+ G+
Sbjct: 368 VELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGL 427
Query: 126 FRCLDPHKAFELLIRFMERE-------PLTQK-------LVC-------NTLLYRLSNNS 164
+ D + + + +ERE P+ VC NTL+ LS +
Sbjct: 428 CKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSG 487
Query: 165 MASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYL 224
M +A +L M + G P+ TF+ + L + + + ++RG +P TY
Sbjct: 488 MVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYS 547
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
L++ L K + E + L + + +N +Y+ V+D KV M+ A + R+MRD
Sbjct: 548 TLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDA 607
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
P+ VT+NTLI G K + + LL +LE GF P T+ ++ LCR+ RF++A
Sbjct: 608 GCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEA 667
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR-ISPDIYTFNALIQ 403
++ L M G PN ITY+ ++ LC G V +L F+KM D ++P + ++ALI
Sbjct: 668 VEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALID 727
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
C+ +I++A + M+ G PD ++S LI L +GR D + F M + GC
Sbjct: 728 GLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKA 787
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
D Y N ++ +G F A+ +++ K GI+
Sbjct: 788 DIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIA 821
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 137/523 (26%), Positives = 248/523 (47%), Gaps = 32/523 (6%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQM---------------------SVD 39
++ GISP+ Y +++ L K+ F+QM V
Sbjct: 408 VAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQ 467
Query: 40 QCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV 99
C+P TYN L+ G+ + G+V +AL L++ M G +P+V T+ ++DG C +R+ +
Sbjct: 468 VCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDA 527
Query: 100 FRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
V + ER PN T +L+ G+ + +A +LL + +E + +T++
Sbjct: 528 HNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDG 587
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
L +A +LR+M D G LP++ T++ + L E G+L ++ G P
Sbjct: 588 LLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPS 647
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
TY L L ++GR E L+++ N +Y+ ++D CK + A
Sbjct: 648 VVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFE 707
Query: 280 EM-RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
+M RD +AP+++ ++ LI G CK + + E L ++ G PD TF+ +I+ LC A
Sbjct: 708 KMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDA 767
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
R + L+ M E G + YN +I + C G+ + + L ++M+ I+ + T
Sbjct: 768 GRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTH 827
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRP----DNFSYSALIKALIKSGRFDEAKQTFL 454
+I++ C ++I++A F S+ P D SY+ LI +L+ S R ++A +
Sbjct: 828 GIVIKALCGNDRIDEAVSYFHSI------PEDCRDEISYNTLITSLVASRRSEQALELLR 881
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+M +G +PD+ +++ L + G E A +++ + RG S
Sbjct: 882 AMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHS 924
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 222/483 (45%), Gaps = 38/483 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP +N+V+D L K I A+ F++ C+P+ TY+ LI G+ ++ +DEA
Sbjct: 503 GLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEA 562
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L+ +M LG N TY+ ++DG R+ + VL M++ P+ T +L+ G
Sbjct: 563 LQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDG 622
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ Q+L EA +LR+M + G+ P
Sbjct: 623 FFK--------------------RQRL---------------REAVGLLREMLEAGFHPS 647
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ L +E ILD RG P TY +++ L KAGR E Y
Sbjct: 648 VVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFE 707
Query: 245 HVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +D +V+ +V +Y+ +ID CK +D A E M P++VTF+ LI+G C
Sbjct: 708 KMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDA 767
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ EL + E G K D + +N+MI+ C F A L EM G+ NT+T+
Sbjct: 768 GRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTH 827
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
I+I++LC + ++ F + D D ++N LI S + E+A + +M+
Sbjct: 828 GIVIKALCGNDRIDEAVSYFHSIPED--CRDEISYNTLITSLVASRRSEQALELLRAMVA 885
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G PD +Y ++ L K+G + A + M G +PD T +++ L + +
Sbjct: 886 DGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPL 945
Query: 484 AHD 486
A D
Sbjct: 946 ACD 948
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/542 (25%), Positives = 234/542 (43%), Gaps = 64/542 (11%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ +G +P YN ++D L K+ ++ A + Q ++ P FT+ I + G+ + G
Sbjct: 167 VLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGN 226
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRV-------------AEVF------- 100
+ A M G +PN TY LIDG C A ++ A +F
Sbjct: 227 LTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLH 286
Query: 101 ---------RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL 151
++++K PN SL++G+ + +AFEL E +
Sbjct: 287 GLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVI 346
Query: 152 VCNTLLYRLSNNSMASEA---AAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
N LL L EA ++R+ G P TF + L +N+ +
Sbjct: 347 TYNILLKGLCKLRRIPEAYRHVELMRRT--EGCSPNVVTFSTLIQGLCNAGRVNQAWEVY 404
Query: 209 DTFIK-RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNS---------- 257
+ + G+ P TY L+E L KAG R L F+ L S
Sbjct: 405 ERMVAVEGISPNRFTYAFLLEGLCKAGD----SRRLEQCFEQMLEREWRSSSSWPIHSPE 460
Query: 258 ---------------YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
YN ++ K M+ A + M + ++P+++TFN+++ G CK
Sbjct: 461 VDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCK 520
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + LE G +P+ T++++ID L + + ++AL L++MVE G NT+T
Sbjct: 521 EQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVT 580
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y+ ++ L +G + ++ + ++M+ PD T+N LI F + ++ +A ML
Sbjct: 581 YSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREML 640
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G P +Y+ L L +SGRFDEA + M GC P++ T + I++ L + GR
Sbjct: 641 EAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVT 700
Query: 483 EA 484
EA
Sbjct: 701 EA 702
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/508 (24%), Positives = 236/508 (46%), Gaps = 29/508 (5%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN +I+ L K+ + A+ F++ +P TY+ +I G+CR VD+ +L+++M
Sbjct: 4 YNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMA 63
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G G APN TY L++ R E F +LE M P T ++ G+ + +
Sbjct: 64 GRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIE 123
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
AF ++ ++R + + LL+ L EA +++ G+ P++ T++ V
Sbjct: 124 AAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMV 183
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L L +L + P T+ + ++ L KAG + + + + +
Sbjct: 184 DGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVS 243
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
N +Y+ +ID CK +D A + +RD++ + F++L+ G C + H+ E
Sbjct: 244 PNTVTYDALIDGLCKAGKLDIALGL---LRDKNSQAGMFAFSSLLHGLC---QAHRLEEA 297
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+ +L P+ FNS+++ LC+A R ++A + M E G + ITYNIL++ LC
Sbjct: 298 IQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCK 357
Query: 373 IGDVARSLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL-GLRPDN 430
+ + + R + M + + SP++ TF+ LIQ C ++ +A + + M+ + G+ P+
Sbjct: 358 LRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNR 417
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNG---------------------CNPDSYTSN 469
F+Y+ L++ L K+G +Q F M + C P T N
Sbjct: 418 FTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYN 477
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGIS 497
++ L + G +A +++ E G+S
Sbjct: 478 TLVTGLSKSGMVRDALGLLEFMIESGLS 505
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/515 (25%), Positives = 235/515 (45%), Gaps = 29/515 (5%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P+ Y+ VID L + N +D ++M+ C P+ TYN L++ + G E
Sbjct: 30 FGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKE 89
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+++M G P + T+ ++I G C + FRV++ M +R P+ L+H
Sbjct: 90 AFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLH 149
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ +A+ + + + NT++ L A +L+ + + P
Sbjct: 150 ALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSP 209
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
TF V L +L D+ + GV P TY L++ L KAG+ D L
Sbjct: 210 TVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKL---DIAL 266
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + +++ ++ C+ + ++ A ++ + M PN+V FN+L++G C+
Sbjct: 267 GLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAM---PCVPNVVCFNSLMNGLCQA 323
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW-GVPPNTIT 362
V + EL ++ E G D T+N ++ LC+ R +A + M G PN +T
Sbjct: 324 RRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVT 383
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQA-DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
++ LI+ LC G V ++ ++++M A + ISP+ +T+ L++ C+ + E+ F M
Sbjct: 384 FSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQM 443
Query: 422 LTLGL---------------------RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
L RP +Y+ L+ L KSG +A M ++G
Sbjct: 444 LEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESG 503
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+PD T N +L+ L ++ R +AH++ K + ERG
Sbjct: 504 LSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG 538
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/543 (24%), Positives = 238/543 (43%), Gaps = 52/543 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P+ YN +++AL+ A+ ++M+ + C P+ T+ ++I G+C+ G ++ A
Sbjct: 66 GCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAA 125
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R+V +M G+ P+V +T+L+ C RV E + + + P+ T ++V G
Sbjct: 126 FRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDG 185
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+++ A +L E + LS + A M G P
Sbjct: 186 LYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPN 245
Query: 185 SSTFDYTVTCLVTGLDLNETCGIL-DTFIKRGV--------------------------- 216
+ T+D + L L+ G+L D + G+
Sbjct: 246 TVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMP 305
Query: 217 -KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT 275
P + LM L +A R E + + + ++V +YN+++ CK+ + A
Sbjct: 306 CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAY 365
Query: 276 EICREMRDRD-IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC-GFKPDKFTFNSMID 333
MR + +PN+VTF+TLI G C V++ E+ ++ G P++FT+ +++
Sbjct: 366 RHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLE 425
Query: 334 CLCRAHRFEDALDCLSEMVE--------WGVP-------------PNTITYNILIRSLCA 372
LC+A C +M+E W + P +TYN L+ L
Sbjct: 426 GLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSK 485
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G V +L L + M +SPD+ TFN+++ C+ +I A F L G RP+ +
Sbjct: 486 SGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVT 545
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
YS LI L K + DEA Q M + GC ++ T + +++ L++ GR E+A +++ +
Sbjct: 546 YSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMR 605
Query: 493 ERG 495
+ G
Sbjct: 606 DAG 608
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 215/461 (46%), Gaps = 13/461 (2%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
TYN+LI+G+C+ G V +A ++ G+ P V TY+ +IDG C V + ++LE M
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
R PN T +LV+ + +AF LL R + + ++ L
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
A ++ +M DRG++P+ + L ++E + G P TY +
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ LYKAGR L + + V ++ + +D K + A E M +
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
+PN VT++ LI G CK ++ L +L + + F F+S++ LC+AHR E+A+
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIA---LGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQ 299
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L M PN + +N L+ LC V + LF M+ S D+ T+N L++ C
Sbjct: 300 LLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLC 356
Query: 407 RMNKIEKAEKAFFSM-LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM-EQNGCNPD 464
++ +I +A + M T G P+ ++S LI+ L +GR ++A + + M G +P+
Sbjct: 357 KLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPN 416
Query: 465 SYTSNLILETLVQQG---RFEEAHDIVKTSKERGISFKSFP 502
+T +LE L + G R E+ + + + R S S+P
Sbjct: 417 RFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWR--SSSSWP 455
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 219/496 (44%), Gaps = 26/496 (5%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG +T Y+ V+D L+K ++ A + +QM C PD TYN LI G + + E
Sbjct: 572 LGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLRE 631
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+++M G+ P+V TYT L G C + R E +L+ M R PN T S+V
Sbjct: 632 AVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVD 691
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + +A + E + ++ + L+ L EA L +M G +
Sbjct: 692 GLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRI 751
Query: 183 PESSTFDYTVTCLV------TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
P+ TF + L TGL+L CG+ + RG K Y ++ A G
Sbjct: 752 PDVVTFSILINGLCDAGRIDTGLEL--FCGMAE----RGCKADIYAYNAMINAYCLKGEF 805
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT----EICREMRDRDIAPNLVT 292
L + + N ++ +VI C + +D A I + RD ++
Sbjct: 806 SAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDE------IS 859
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+NTLI+ + ELL ++ G PD + +++D L +A E A L EM
Sbjct: 860 YNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMR 919
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
G P+ TY I+I L + + F++M + PD +++LI +FC+ +K++
Sbjct: 920 SRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVD 979
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
A K S G+ P YS ++ +L K+ D+A + M+ C P + +
Sbjct: 980 DAWKLLRSS---GIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLA 1036
Query: 473 ETLVQQGRFEEAHDIV 488
V +GR +EA +V
Sbjct: 1037 TAYVAEGRVDEAVKLV 1052
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 177/390 (45%), Gaps = 18/390 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQC-KPDRFTYNILIHGICRIGVVDE 63
G +P+ Y++++D L K+ + A F++M+ D+ P Y+ LI G+C+ G +DE
Sbjct: 678 GCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDE 737
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +++M G P+V T++ILI+G C+A R+ + M ER + ++++
Sbjct: 738 AYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMIN 797
Query: 124 GVFRCLDPH-KAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGY 181
CL A L+ M+ + + V + ++ + L N EA +
Sbjct: 798 AY--CLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHS------ 849
Query: 182 LPESS----TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
+PE +++ +T LV + +L + G P Y+ +M+ L+KAG
Sbjct: 850 IPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPE 909
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ L + ++ +Y ++I K + A + EM +++ P+ + +++LI
Sbjct: 910 VAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLI 969
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
CK +V +LL G +P +++M+D LC+ + AL+ + EM
Sbjct: 970 DAFCKADKVDDAWKLL---RSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCE 1026
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
P + L + A G V +++L +Q
Sbjct: 1027 PGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 108/211 (51%), Gaps = 3/211 (1%)
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+VT+N LI+G CK V ++ GF+P T++++ID LCR + + L
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
EM G PN +TYN L+ +L G + L ++M A+ P++ TF +I+ C+
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
+IE A + M+ G PD ++ L+ AL + GR DEA F + G PD+ T N
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+++ L + GR E A +++ E SF S
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAE---SFSS 208
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 156/496 (31%), Positives = 250/496 (50%), Gaps = 12/496 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN++ID L K+N D A F+ M +C P TYN L+ G+ R G ++ A
Sbjct: 109 GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 168
Query: 65 LRLVKQMEGLGY-------APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
+ L ++M +PNV TY++LIDG C A RV++ +LE MK R P+ T
Sbjct: 169 MALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVIT 228
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
LV G+ + A+E+L ++ + + N+LL+ L S+A A++R M
Sbjct: 229 YTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMT 288
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
RG P T+ + L + + C +L I +G P Y +L+ L KA +
Sbjct: 289 CRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVD 348
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E L + +V +Y+ VI C+ N +D A + ++ R P+++ ++TLI
Sbjct: 349 ESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLI 408
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G CK +V + +L ++ G D T++++ID LC+A R ++A L+ MV G P
Sbjct: 409 DGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTP 468
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA--- 414
P+T+TYN LI+ LC + + ++ L ++M+ +P T+N LI CRM +++ A
Sbjct: 469 PSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVL 528
Query: 415 -EKAFFSMLTLGLRP-DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
E+A + G D +YS+LI L K+GR EA F M NG PD T +++L
Sbjct: 529 LEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILL 588
Query: 473 ETLVQQGRFEEAHDIV 488
E L + E +V
Sbjct: 589 EGLKKSKDLHELRHLV 604
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 220/463 (47%), Gaps = 44/463 (9%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
C+PD +TY L+ G CR G +D+A R +M PNV+ +ILIDG C AKR +
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
R M+ + + +L+ G+++
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWK--------------------------------- 91
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
+A AIL +M D G P T++ + L + + + + P
Sbjct: 92 --EKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSM 149
Query: 221 STYLLLMEALYKAGRDVEG--------DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
TY L++ L++ G+ DR +H DR NV +Y+++ID CK N +
Sbjct: 150 VTYNTLLDGLFRTGKLERAMALFQEMLDRR-SHDMDDRCSPNVITYSVLIDGLCKANRVS 208
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
+A E+ M+ R +P+++T+ L+ G CK+++V E+L +L+ G P+ T+NS++
Sbjct: 209 QAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLL 268
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
LCRA R DAL + +M G PN +TY LI LC +G V + + M +
Sbjct: 269 HGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGT 328
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PD+ +N LI C+ ++++++ ++ G++PD +YS++I L +S R DEA +
Sbjct: 329 PDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRL 388
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
L ++ GC PD + +++ L + G+ +EA D+ + G
Sbjct: 389 LLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDG 431
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/498 (28%), Positives = 233/498 (46%), Gaps = 9/498 (1%)
Query: 8 PSTRLYNAVIDALVKSN-SIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
P+ L + +ID L K+ SID A F+ M D Y L+ G+ + +D+AL
Sbjct: 42 PNVFLCSILIDGLCKAKRSID-ALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALA 100
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++ +M G PNV TY LIDG C + E MK P+ T +L+ G+F
Sbjct: 101 ILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLF 160
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCN-------TLLYRLSNNSMASEAAAILRKMGDR 179
R +A L ++R C+ L+ L + S+A +L M R
Sbjct: 161 RTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKAR 220
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G P+ T+ V L + +L + G P TY L+ L +A R +
Sbjct: 221 GCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDA 280
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + NV +Y +ID CKV + A + +M D+ P+L+ +N LI+G
Sbjct: 281 LALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLING 340
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK +V ++ LL + G KPD T++S+I LCR++R ++A L + G PP+
Sbjct: 341 LCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPD 400
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
I Y+ LI LC G V + L++ M D D+ T++ LI C+ ++++A
Sbjct: 401 VILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLA 460
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M+ +G P +Y++LIK L DEA + ME++ C P + T N+++ + +
Sbjct: 461 RMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRME 520
Query: 480 RFEEAHDIVKTSKERGIS 497
R + A +++ +K R ++
Sbjct: 521 RVDSAVVLLEQAKARCVA 538
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 155/326 (47%), Gaps = 10/326 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P+ Y +ID L K + A M PD YN+LI+G+C+ VDE+
Sbjct: 291 GCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDES 350
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+++ G P+V TY+ +I G C + R+ E R+L +K R P+ +L+ G
Sbjct: 351 IALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDG 410
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +AF+L M + +V +TL+ L EA +L +M G P
Sbjct: 411 LCKAGKVDEAFDLY-EVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPP 469
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + L L+E +++ + P TY +L+ + + R V+ L
Sbjct: 470 STMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMER-VDSAVVL 528
Query: 244 NHVFKDRLVS------NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
K R V+ + +Y+ +ID CK + A + +EM D + P+ +T++ L+
Sbjct: 529 LEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILL 588
Query: 298 SGHCKDAEVHKTRELLV-MLLECGFK 322
G K ++H+ R L++ +++ G++
Sbjct: 589 EGLKKSKDLHELRHLVLDQMVQLGYR 614
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G PST YN++I L N +D A ++M C P TYNILIHG+CR+ VD
Sbjct: 465 MGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDS 524
Query: 64 ALRLVKQMEGL-----GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
A+ L++Q + G A + Y+ LIDG C A RVAE + M + V P+ T
Sbjct: 525 AVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITY 584
Query: 119 RSLVHGVFRCLDPHKAFELLIRFM 142
L+ G+ + D H+ L++ M
Sbjct: 585 SILLEGLKKSKDLHELRHLVLDQM 608
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 153/499 (30%), Positives = 255/499 (51%), Gaps = 12/499 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S +T YNA+I+ L K +I+ AY ++M+ +PD TYN ++ G+CR+G V EA
Sbjct: 75 GCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEA 134
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM--KERNVCPNEATVRSLV 122
+ M GY+P+V Y L+D +VAE + + + M +R V P+ T +L+
Sbjct: 135 KQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLI 194
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G R +A +L + + + + N++L L+ S EA + +KM D G
Sbjct: 195 DGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCA 254
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEA----LYKAGRDVE 238
P +T+ ++ ++ + + ++ RFS +LL A L KA + +
Sbjct: 255 PNGATYSIVLSGHCRVGNMARCLELYEEMTEK----RFSPDVLLCNAVIDMLCKAKKVDD 310
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ L + K V +V +YN+++D CK N++D+A E+ M D AP++V+++ +++
Sbjct: 311 AHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLN 370
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G CK +VH R L ++E PD TFN ++D LC+A + ++A D L M E V P
Sbjct: 371 GLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLP 430
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ +T L+ LC ++RLFQ M D+ N ++ CR K+ +A F
Sbjct: 431 DGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFF 490
Query: 419 FSMLTLG--LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
SM+ PD +Y+ L+ ALI++GR D+A F M +GC PD N ++ L
Sbjct: 491 KSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLR 550
Query: 477 QQGRFEEAHDIVKTSKERG 495
+QGR +A + + KE+G
Sbjct: 551 KQGRHIQADRLTQAMKEKG 569
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 136/463 (29%), Positives = 226/463 (48%), Gaps = 2/463 (0%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
+PD TY+ +I G+C+ G V EAL +V++M G P+V TYTI++D C A +V E
Sbjct: 7 EPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADE 66
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
+ M ER N +L++G+ + + +A++LL + + NT+L L
Sbjct: 67 LFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLC 126
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF--IKRGVKPR 219
SEA M RGY P+ ++ + L + E G+ T R V P
Sbjct: 127 RMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPD 186
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
TY L++ + + E + V + + +YN ++ + + MD A E+ +
Sbjct: 187 LITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFK 246
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
+M D APN T++ ++SGHC+ + + EL + E F PD N++ID LC+A
Sbjct: 247 KMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAK 306
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ +DA L EM + G P+ +TYNIL+ LC V ++ LF M + +PDI +++
Sbjct: 307 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYS 366
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
++ C+ NK+ A F M+ L PD +++ L+ L K+G+ DEAK M ++
Sbjct: 367 VVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEH 426
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFP 502
PD T ++ L + R +EA + + E+G P
Sbjct: 427 NVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLP 469
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 198/431 (45%), Gaps = 4/431 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCK--PDRFTYNILIHGICRIGVVD 62
G SP YN ++DAL K + A+ F+ M + K PD TYN LI G CR+ D
Sbjct: 145 GYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTD 204
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA++L K + GY P+ TY ++ G + E + + M + PN AT ++
Sbjct: 205 EAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVL 264
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G R + + EL E+ L+CN ++ L +A +L +M G +
Sbjct: 265 SGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAV 324
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ T++ + L +++ + T + G P +Y +++ L K + +
Sbjct: 325 PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVL 384
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + + +LV +V ++N+++D CK +D A ++ M + ++ P+ VT TL+ G C+
Sbjct: 385 FDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCR 444
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV--EWGVPPNT 360
D + L ++E G D N ++ LCR + AL MV + P+
Sbjct: 445 DKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDV 504
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TY L+ +L G V +++ FQ+M +PD +N L+ + + +A++ +
Sbjct: 505 VTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQA 564
Query: 421 MLTLGLRPDNF 431
M G D F
Sbjct: 565 MKEKGFLSDCF 575
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 152/287 (52%), Gaps = 2/287 (0%)
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
++G +P TY ++ L K G+ E + + + + +V +Y +++D C+ +D
Sbjct: 3 EKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVD 62
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A E+ +M +R + N V +N LI+G CKD + + +LL + G++PD T+N+++
Sbjct: 63 EADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTIL 122
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ-ADR- 390
LCR + +A M G P+ + YN L+ +L G VA + LF+ M ADR
Sbjct: 123 SGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRK 182
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
++PD+ T+N LI FCR+ K ++A K F ++ G PD +Y++++ L + DEA+
Sbjct: 183 VAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAE 242
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ F M +GC P+ T +++L + G ++ + E+ S
Sbjct: 243 EMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFS 289
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 173/381 (45%), Gaps = 72/381 (18%)
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
M ++G+ P+ T+ ++ L + E +++ ++GV P +TY ++++ L +AG+
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
E D + + + +N +YN +I+ CK ++RA ++ EM + P+ +T+NT
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDK------------------------------ 325
++SG C+ +V + ++ + G+ PD
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 326 -------FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN-------------- 364
T+N++ID CR + ++A+ +++ G P+T+TYN
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240
Query: 365 ---------------------ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
I++ C +G++AR L L+++M R SPD+ NA+I
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
C+ K++ A K M +G PD +Y+ L+ L K+ D+A + F +M NGC P
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360
Query: 464 DSYTSNLILETLVQQGRFEEA 484
D + +++L L + + +A
Sbjct: 361 DIVSYSVVLNGLCKTNKVHDA 381
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 120/217 (55%), Gaps = 2/217 (0%)
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M ++ P++VT++T+ISG CK +V + E++ + E G PD T+ ++D LCRA +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
++A + +M+E G NT+ YN LI LC ++ R+ +L ++M + PD T+N
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF--LSMEQ 458
++ CRM K+ +A++ F SM + G PD +Y+ L+ AL K G+ EA F + M
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
PD T N +++ + + +EA + K +G
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKG 217
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 123/267 (46%), Gaps = 11/267 (4%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S +G P YN ++D L K+N +D A+ F M + C PD +Y+++++G+C+
Sbjct: 318 MSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNK 377
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V +A L +M P+V T+ IL+DG C A ++ E +L++M E NV P+ T +
Sbjct: 378 VHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTT 437
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM--GD 178
L+HG+ R +A L +E+ + L N +L L ++A + M D
Sbjct: 438 LMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSD 497
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+ P+ T+ V L+ +++ G P + Y LM L K GR
Sbjct: 498 GEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGR--- 554
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCF 265
H+ DRL + + DCF
Sbjct: 555 ------HIQADRLTQAMKEKGFLSDCF 575
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 74/147 (50%)
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M E G P+ +TY+ +I LC G V +L + ++M ++PD+ T+ ++ CR K
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+++A++ F M+ G + +Y+ALI L K + A + M G PD+ T N
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 471 ILETLVQQGRFEEAHDIVKTSKERGIS 497
IL L + G+ EA + RG S
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYS 147
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 151/496 (30%), Positives = 242/496 (48%), Gaps = 4/496 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P Y A+ID L K + AY F++ C P TYN +I G+C+ G ++ AL
Sbjct: 26 IYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENAL 85
Query: 66 RLVKQME-GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L M G+ P V TY+ LIDG C V + ++LE M R PN T +LV+
Sbjct: 86 TLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNA 145
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG--DRGYL 182
+ +AF LL + + + ++ L A ++ +M + G
Sbjct: 146 LLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLS 205
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ TF+ + L + + + ++RG +P TY L++ L K + E +
Sbjct: 206 PDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQL 265
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + + +N +Y+ V+D KV M+ A + R+MRD P+ VT+NTLI G K
Sbjct: 266 LAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFK 325
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + LL +LE GF P T+ ++ LCR+ RF++A++ L M G PN IT
Sbjct: 326 RQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAIT 385
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADR-ISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y+ ++ LC G V +L F+KM D ++P + ++ALI C+ KI++A + M
Sbjct: 386 YSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERM 445
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ G PD ++S LI L +GR D + F M + GC PD T +++ L + R
Sbjct: 446 IRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRV 505
Query: 482 EEAHDIVKTSKERGIS 497
+EA D+ + + G+S
Sbjct: 506 DEAFDLFQQMRSDGLS 521
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 210/415 (50%), Gaps = 3/415 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P+ YN +++AL+ A+ +QM+ + C P+ T+ ++I G+C+ G ++ A
Sbjct: 131 GCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAA 190
Query: 65 LRLVKQMEGL--GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
R+V +M + G +P+V T+ ++DG C +R+ + V + ER PN T +L+
Sbjct: 191 FRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLI 250
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + +A +LL + +E + +T++ L +A +LR+M D G L
Sbjct: 251 DGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCL 310
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P++ T++ + L E G+L ++ G P TY L L ++GR E
Sbjct: 311 PDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEI 370
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM-RDRDIAPNLVTFNTLISGHC 301
L+++ N +Y+ ++D CK + A +M RD +AP+++ ++ LI G C
Sbjct: 371 LDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLC 430
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K ++ + E L ++ G PD TF+ +I+ LC A R + L+ M E G P+ +
Sbjct: 431 KAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMV 490
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
TY L+ LC V + LFQ+M++D +SPD T +I +N+ E A++
Sbjct: 491 TYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKR 545
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 204/436 (46%), Gaps = 36/436 (8%)
Query: 51 LIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
+I G+C+ VD+A+ L KQM P+V TY LIDG +RV E + + E + +
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 111 VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA 170
P T +++ G+ +C A L + MA
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLY------------------------DDMAIHF- 95
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
G+ P T+ + L ++++ C +L+ RG P TY L+ AL
Sbjct: 96 ---------GFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNAL 146
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM--RDRDIAP 288
GR E L + + + ++ ++I CK ++ A + EM + ++P
Sbjct: 147 LGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSP 206
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+++TFN+++ G CK+ + + LE G +P+ T++++ID L + + ++AL L
Sbjct: 207 DVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLL 266
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
++MVE G NT+TY+ ++ L +G + ++ + ++M+ PD T+N LI F +
Sbjct: 267 AKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKR 326
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
++ +A ML G P +Y+ L L +SGRFDEA + M GC P++ T
Sbjct: 327 QRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITY 386
Query: 469 NLILETLVQQGRFEEA 484
+ I++ L + GR EA
Sbjct: 387 SSIVDGLCKAGRVTEA 402
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 125/297 (42%), Gaps = 36/297 (12%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG +T Y+ V+D L+K ++ A + +QM C PD TYN LI G + + E
Sbjct: 272 LGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLRE 331
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+++M G+ P+V TYT L G C + R E +L+ M R PN T S+V
Sbjct: 332 AVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVD 391
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG-DRGYL 182
G L +EA KM D
Sbjct: 392 G-----------------------------------LCKAGRVTEALGYFEKMARDEVVA 416
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P + + L ++E L+ I+ G P T+ +L+ L AGR G
Sbjct: 417 PHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLEL 476
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + V ++ +Y ++D C+ + +D A ++ ++MR ++P+ T T+I G
Sbjct: 477 FRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHG 533
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 140/509 (27%), Positives = 254/509 (49%), Gaps = 16/509 (3%)
Query: 5 GISPSTRLYNAVIDALVKS-NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P YNA++DA++++ S+ +A F++M P+ +TYNILI G C G ++
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L +ME G PNV TY +ID +C +++ E F++L +M + + PN + +++
Sbjct: 222 GLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVIN 281
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R + E+L +R + ++ NTL+ N +A + +M G P
Sbjct: 282 GLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSP 341
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ + + +LN LD RG+ P TY L++ + G + + +
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIM 401
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ ++ + +YN +I+ C + M+ A+ + +EM +R P++V+++T+ISG C++
Sbjct: 402 KEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRN 461
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E+ K +L V ++ G PD T++S+I LC+ R + D EM+ G+PP+ +TY
Sbjct: 462 QELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTY 521
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI + C GD+ ++LRL +M SPDI T+N LI F + ++ ++A++ +L
Sbjct: 522 TSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLY 581
Query: 424 LGLRPDNFSYS---------------ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
P+ +Y+ AL+K G +EA + SM Q G +
Sbjct: 582 EESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVY 641
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGIS 497
N+I+ + G E+A+++ K G +
Sbjct: 642 NVIIHGHSKVGNIEKAYNLYKEMLHSGFA 670
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 129/450 (28%), Positives = 222/450 (49%), Gaps = 9/450 (2%)
Query: 40 QCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV 99
QCK +++++ R+ ++++AL +V + G+ P V +Y ++D K+ ++
Sbjct: 127 QCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKI 186
Query: 100 FR-VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF---MEREPLTQKLVC-N 154
+ + M E V PN T L+ G C + E+ + F MER +V N
Sbjct: 187 AEGIFKEMVESGVSPNVYTYNILIRGF--CTAGN--LEMGLXFFGEMERNGCLPNVVTYN 242
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
T++ EA +LR M +G P +++ + L + ET IL+ KR
Sbjct: 243 TIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKR 302
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
P T+ L+ G + + K+ L NV +Y +I+ CK ++RA
Sbjct: 303 RYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRA 362
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
E +MRDR + PN T+ TLI G + + + +++ ++E GF P T+N++I+
Sbjct: 363 MEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALING 422
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
C R EDA L EM+E G P+ ++Y+ +I C ++ ++ +L +M A ISPD
Sbjct: 423 HCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPD 482
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+ T+++LIQ C+ ++ + F ML+LGL PD +Y++LI A G D+A +
Sbjct: 483 VATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHD 542
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
M Q G +PD T N+++ +Q R +EA
Sbjct: 543 EMIQKGFSPDIVTYNVLINGFNKQSRTKEA 572
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 22/285 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP Y+++I L K + FQ+M PD TY LI+ C G +D+A
Sbjct: 478 GISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKA 537
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL-EIMKERNVCPNEATVRSLVH 123
LRL +M G++P++ TY +LI+GF R E R+L +++ E +V PNE T +L+
Sbjct: 538 LRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV-PNEITYNTLID 596
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
L+ A L+ F + + +EA +L M +GY
Sbjct: 597 NC-NNLEFKSALALMKGFCMK-------------------GLMNEADRVLESMLQKGYKL 636
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ + ++ + + + G P T + L ++LY G++VE ++ L
Sbjct: 637 NEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLL 696
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
++ K ++ ++I K MD + ++M + P
Sbjct: 697 DYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 15/149 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P Y ++I+A +D A +M PD TYN+LI+G + E
Sbjct: 512 LGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKE 571
Query: 64 ALRLVKQMEGLGYAPNVYTYTILID---------------GFCNAKRVAEVFRVLEIMKE 108
A RL+ ++ PN TY LID GFC + E RVLE M +
Sbjct: 572 AKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQ 631
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAFEL 137
+ NE ++HG + + KA+ L
Sbjct: 632 KGYKLNEEVYNVIIHGHSKVGNIEKAYNL 660
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 233/456 (51%)
Query: 40 QCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV 99
+C+ + T+ I+I G+C+ + EA +M+ G PN +TY +LI+GFC +V
Sbjct: 2 ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 61
Query: 100 FRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
+ +L+ MKE + PN T +++HG R A++L + +E + + NTLL
Sbjct: 62 YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 121
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
L N + EA +L +M +RG P+ ++D + L ++ + + P
Sbjct: 122 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 181
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
Y L+ L K GR E + + ++ +V ++ ++D CK + + A ++
Sbjct: 182 VVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 241
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
M DR+ PN++T+++LI G CK +V +E+ ++ G +P+ T+NS+I C +
Sbjct: 242 TMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTN 301
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ AL + EM G P+ ITYN LI LC G + RLF M+A +PD+ T++
Sbjct: 302 GVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYS 361
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI FC++ +I+ A F ML + PD ++S L++ +G D+A++ M +
Sbjct: 362 CLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVAS 421
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
C+PD YT +++ + GR EA ++K +RG
Sbjct: 422 DCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG 457
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 229/485 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN +I+ K + + AYL ++M P+ TY+ +IHG CR VD A
Sbjct: 37 GTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTA 96
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L +QM G PN+ TY L+ G C + E + +L+ M+ER + P++ + +L+ G
Sbjct: 97 YKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAG 156
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A ++ + + +TL+ L EA + KM + P+
Sbjct: 157 LCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPD 216
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + L G L E +L+T R P TY L++ L K G+ +
Sbjct: 217 VVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFK 276
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + NV +YN +I FC N +D A + EM P+++T+NTLI G CK
Sbjct: 277 RMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTG 336
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ L + PD T++ +I C+ R + A +M++ V P+ +T++
Sbjct: 337 RAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFS 396
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ C G V + RL ++M A SPD+YT+ +L+ FC++ ++ +A + M
Sbjct: 397 TLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKR 456
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G +P+ +Y+ALI A ++G+ A + M NG P+ T ++ G EEA
Sbjct: 457 GCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEA 516
Query: 485 HDIVK 489
+++
Sbjct: 517 RKMLE 521
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 233/486 (47%), Gaps = 2/486 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y+ ++ L K+ ID+A F+ S C PD Y+ LI G+C+ G +DEA
Sbjct: 142 GLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEA 201
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L ++M P+V T+T L+DG C R+ E +VLE M++RN PN T SL+ G
Sbjct: 202 CKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDG 261
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A E+ R + R + N+L++ + A ++ +M G LP+
Sbjct: 262 LCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPD 321
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L E + + P TY L+ K R +
Sbjct: 322 IITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFD 381
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K ++ +V +++ +++ +C ++D A + EM D +P++ T+ +L+ G CK
Sbjct: 382 DMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVG 441
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + R +L + + G +P+ T+ ++ID CRA + A L EMV GV PN ITY
Sbjct: 442 RMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYR 501
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADR-ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI C GD+ + ++ ++++ D D++ + ++ CR ++ A + ++
Sbjct: 502 SLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQ 561
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME-QNGCNPDSYTSNLILETLVQQGRFE 482
G P + Y ALI+ L + +A + M P++ +++ L ++GR E
Sbjct: 562 SGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHE 621
Query: 483 EAHDIV 488
EA+ +
Sbjct: 622 EANALA 627
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/492 (25%), Positives = 228/492 (46%), Gaps = 1/492 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ Y+ VI + +D AY F+QM + C P+ TYN L+ G+CR G++DEA
Sbjct: 72 GLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEA 131
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M G P+ ++Y L+ G C ++ +V E + P+ +L+ G
Sbjct: 132 YELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAG 191
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A +L + E + L+ L EA +L M DR P
Sbjct: 192 LCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPN 251
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L + + + I RG++P TY L+ +
Sbjct: 252 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME 311
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++ +YN +ID CK A + +M+ + P+++T++ LI G CK
Sbjct: 312 EMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLE 371
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ R L +L+ PD TF+++++ C A +DA L EMV P+ TY
Sbjct: 372 RIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 431
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ C +G + + R+ ++M P++ T+ ALI +FCR K A K M+
Sbjct: 432 SLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGN 491
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN-GCNPDSYTSNLILETLVQQGRFEE 483
G++P+ +Y +LI +G +EA++ +E++ C D + ++++ L + GR
Sbjct: 492 GVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSA 551
Query: 484 AHDIVKTSKERG 495
A ++++ K+ G
Sbjct: 552 ALELLEAIKQSG 563
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 153/275 (55%)
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
T+ ++++ L KA R E Y + K V N +YN++I+ FCKV+ + RA + +EM
Sbjct: 9 TWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEM 68
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
++ +APN+VT++T+I G C+ +V +L ++E G P+ T+N+++ LCR
Sbjct: 69 KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 128
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
++A + L EM E G+ P+ +Y+ L+ LC G + +L++F+ PD+ ++ L
Sbjct: 129 DEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTL 188
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I C+ ++++A K F M PD +++AL+ L K R EA+Q +ME C
Sbjct: 189 IAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNC 248
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
P+ T + +++ L + G+ +A ++ K RGI
Sbjct: 249 TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGI 283
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 75/143 (52%)
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N IT+ I+I LC + + F KM+ P+ +T+N LI FC+++K+ +A
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M GL P+ +YS +I + + D A + F M +NGC P+ T N +L L +
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125
Query: 479 GRFEEAHDIVKTSKERGISFKSF 501
G +EA++++ +ERG+ F
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKF 148
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 140/509 (27%), Positives = 254/509 (49%), Gaps = 16/509 (3%)
Query: 5 GISPSTRLYNAVIDALVKS-NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P YNA++DA++++ S+ +A F++M P+ +TYNILI G C G ++
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L +ME G PNV TY +ID +C +++ E F++L +M + + PN + +++
Sbjct: 222 GLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVIN 281
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R + E+L +R + ++ NTL+ N +A + +M G P
Sbjct: 282 GLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSP 341
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ + + +LN LD RG+ P TY L++ + G + + +
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIM 401
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ ++ + +YN +I+ C + M+ A+ + +EM +R P++V+++T+ISG C++
Sbjct: 402 KEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRN 461
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E+ K +L V ++ G PD T++S+I LC+ R + D EM+ G+PP+ +TY
Sbjct: 462 QELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTY 521
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI + C GD+ ++LRL +M SPDI T+N LI F + ++ ++A++ +L
Sbjct: 522 TSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLY 581
Query: 424 LGLRPDNFSYS---------------ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
P+ +Y+ AL+K G +EA + SM Q G +
Sbjct: 582 EESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVY 641
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGIS 497
N+I+ + G E+A+++ K G +
Sbjct: 642 NVIIHGHSKVGNIEKAYNLYKEMLHSGFA 670
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/450 (28%), Positives = 222/450 (49%), Gaps = 9/450 (2%)
Query: 40 QCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV 99
QCK +++++ R+ ++++AL +V + G+ P V +Y ++D K+ ++
Sbjct: 127 QCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKI 186
Query: 100 FR-VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF---MEREPLTQKLVC-N 154
+ + M E V PN T L+ G C + E+ + F MER +V N
Sbjct: 187 AEGIFKEMVESGVSPNVYTYNILIRGF--CTAGN--LEMGLFFFGEMERNGCLPNVVTYN 242
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
T++ EA +LR M +G P +++ + L + ET IL+ KR
Sbjct: 243 TIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKR 302
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
P T+ L+ G + + K+ L NV +Y +I+ CK ++RA
Sbjct: 303 RYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRA 362
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
E +MRDR + PN T+ TLI G + + + +++ ++E GF P T+N++I+
Sbjct: 363 MEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALING 422
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
C R EDA L EM+E G P+ ++Y+ +I C ++ ++ +L +M A ISPD
Sbjct: 423 HCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPD 482
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+ T+++LIQ C+ ++ + F ML+LGL PD +Y++LI A G D+A +
Sbjct: 483 VATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHD 542
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
M Q G +PD T N+++ +Q R +EA
Sbjct: 543 EMIQKGFSPDIVTYNVLINGFNKQSRTKEA 572
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 20/284 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP Y+++I L K + FQ+M PD TY LI+ C G +D+A
Sbjct: 478 GISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKA 537
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LRL +M G++P++ TY +LI+GF R E R+L + PNE T +L+
Sbjct: 538 LRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN 597
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
L+ A L+ F + + +EA +L M +GY
Sbjct: 598 C-NNLEFKSALALMKGFCMK-------------------GLMNEADRVLESMLQKGYKLN 637
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + ++ + + + G P T + L ++LY G++VE ++ L+
Sbjct: 638 EEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLD 697
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
+ K ++ ++I K MD + ++M + P
Sbjct: 698 YTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 15/149 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P Y ++I+A +D A +M PD TYN+LI+G + E
Sbjct: 512 LGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKE 571
Query: 64 ALRLVKQMEGLGYAPNVYTYTILID---------------GFCNAKRVAEVFRVLEIMKE 108
A RL+ ++ PN TY LID GFC + E RVLE M +
Sbjct: 572 AKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQ 631
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAFEL 137
+ NE ++HG + + KA+ L
Sbjct: 632 KGYKLNEEVYNVIIHGHSKVGNIEKAYNL 660
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 139/485 (28%), Positives = 245/485 (50%), Gaps = 1/485 (0%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN ++++L + +D + +M D+ P+ +TYN +++G C++G V+EA + V ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G P+ +TYT LI G+C K + F+V M + NE L+HG+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A +L ++ + E L+ L + SEA ++++M + G P T+ +
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L + + +L +++G+ P TY L+ K G + + + +L
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
N +YN +I +CK N+ +A + +M +R + P++VT+N+LI G C+ L
Sbjct: 426 PNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L ++ + G PD++T+ SMID LC++ R E+A D + + GV PN + Y LI C
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G V + + +KM + P+ TFNALI C K+++A M+ +GL+P +
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
+ LI L+K G FD A F M +G PD++T ++T ++GR +A D++ +
Sbjct: 605 DTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR 664
Query: 493 ERGIS 497
E G+S
Sbjct: 665 ENGVS 669
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 222/463 (47%), Gaps = 1/463 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++I + +D A+ F +M + C+ + Y LIHG+C +DEA
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +M+ P V TYT+LI C ++R +E +++ M+E + PN T L+
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KA ELL + +E+ + + N L+ M +A ++ M R P
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + ++++ G+L+ ++R V P TY L++ ++G R L+
Sbjct: 428 TRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ LV + +Y +ID CK ++ A ++ + + + PN+V + LI G+CK
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V + +L +L P+ TFN++I LC + ++A +MV+ G+ P T
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
ILI L GD + FQ+M + PD +T+ IQ++CR ++ AE M
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
G+ PD F+YS+LIK G+ + A M GC P +T
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHT 709
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 221/500 (44%), Gaps = 20/500 (4%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ R Y +I +L S A ++M KP+ TY +LI +C ++A L
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ QM G PNV TY LI+G+C + + V+E+M+ R + PN T L+ G +
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ HKA +L + +ER+ L + N+L+ + A +L M DRG +P+ T
Sbjct: 441 S-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + L + E C + D+ ++GV P Y L++ KAG+ E L +
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ N ++N +I C + AT + +M + P + T LI KD +
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+L G KPD T+ + I CR R DA D +++M E GV P+ TY+ LI
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM--NKIEKAEKAFFSMLTL- 424
+ +G + + ++M+ P +TF +LI+ M K + +E +M +
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM 739
Query: 425 ---------------GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN-GCNPDSYTS 468
+ P+ SY LI + + G A++ F M++N G +P
Sbjct: 740 EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF 799
Query: 469 NLILETLVQQGRFEEAHDIV 488
N +L + + EA +V
Sbjct: 800 NALLSCCCKLKKHNEAAKVV 819
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 230/496 (46%), Gaps = 19/496 (3%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+SP+TR YN +I KSN + A +M + PD TYN LI G CR G D A
Sbjct: 424 LSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
RL+ M G P+ +TYT +ID C +KRV E + + ++++ V PN +L+ G
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ +A +L + + + L L N L++ L + EA + KM G P
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
ST + L+ D + + G KP TY ++ + GR ++ + +
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++ + ++ +Y+ +I + + + A ++ + MRD P+ TF +LI H + +
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK-HLLEMK 721
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
K + G +P+ ++M++ F+ ++ L +MVE V PN +Y
Sbjct: 722 YGKQK---------GSEPELCAMSNMME-------FDTVVELLEKMVEHSVTPNAKSYEK 765
Query: 366 LIRSLCAIGDVARSLRLFQKMQADR-ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI +C +G++ + ++F MQ + ISP FNAL+ C++ K +A K M+ +
Sbjct: 766 LILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICV 825
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G P S LI L K G + F ++ Q G D +I++ + +QG E
Sbjct: 826 GHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAF 885
Query: 485 HDIVKTSKERGISFKS 500
+++ ++ G F S
Sbjct: 886 YELFNVMEKNGCKFSS 901
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 201/424 (47%), Gaps = 15/424 (3%)
Query: 76 YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAF 135
Y +VY+Y L+ N V VF++ +M + +A V + R ++ + F
Sbjct: 119 YKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALY---VLDLCRKMNKDERF 175
Query: 136 ELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
EL + + + C NTLL L+ + E + +M + P T++ V
Sbjct: 176 ELKYKLI--------IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNG 227
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD-RYLNHVFKDRLVS 253
++ E + ++ G+ P F TY L+ Y +D++ + N +
Sbjct: 228 YCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMG-YCQRKDLDSAFKVFNEMPLKGCRR 286
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
N +Y +I C +D A ++ +M+D + P + T+ LI C + L+
Sbjct: 287 NEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLV 346
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ E G KP+ T+ +ID LC +FE A + L +M+E G+ PN ITYN LI C
Sbjct: 347 KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKR 406
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G + ++ + + M++ ++SP+ T+N LI+ +C+ N + KA ML + PD +Y
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTY 465
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
++LI +SG FD A + M G PD +T ++++L + R EEA D+ + ++
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 494 RGIS 497
+G++
Sbjct: 526 KGVN 529
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 163/384 (42%), Gaps = 19/384 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ +Y A+ID K+ +D A+L ++M C P+ T+N LIHG+C G + EA
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++M +G P V T TILI + + M P+ T + +
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQT 646
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R A +++ + E ++L+ + + A +L++M D G P
Sbjct: 647 YCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPS 706
Query: 185 SSTF------------------DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
TF + + + ++ + +L+ ++ V P +Y L
Sbjct: 707 QHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKL 766
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVN-SYNMVIDCFCKVNMMDRATEICREMRDRD 285
+ + + G ++ +H+ ++ +S +N ++ C CK+ + A ++ +M
Sbjct: 767 ILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVG 826
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
P L + LI G K E + + LL+CG+ D+ + +ID + + E
Sbjct: 827 HLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFY 886
Query: 346 DCLSEMVEWGVPPNTITYNILIRS 369
+ + M + G ++ TY++LI
Sbjct: 887 ELFNVMEKNGCKFSSQTYSLLIEG 910
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 135/491 (27%), Positives = 245/491 (49%), Gaps = 1/491 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ ++ +++ L + A L F++MS C PD TYN +I+G+ + +D+A
Sbjct: 191 GLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS-KTCPPDSVTYNTMINGLSKSDRLDDA 249
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+RL+++M G+APNV++Y ++ GFC A RV +LE M R P+ + ++++G
Sbjct: 250 IRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVING 309
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A ++ + ++R + TL+ A ++RKM +RGY P
Sbjct: 310 LCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPN 369
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + D+ +L I+ G P Y ++ KAG+ E L
Sbjct: 370 AITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLE 429
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +V + +ID CK +D A E+ R D AP++V ++ LI CK
Sbjct: 430 QMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAK 489
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L ++++ PD T+NS++D LC++ R DA M GV P+ +TY+
Sbjct: 490 RLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYS 549
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+I S C ++ + ++ ++M+ + PD+ T++ALI C+ ++KA F ML
Sbjct: 550 IVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGC 609
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G P+ +Y+ LI L K + ++A + M + C PDS T ++ L R EEA
Sbjct: 610 GCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEA 669
Query: 485 HDIVKTSKERG 495
+++ K++G
Sbjct: 670 WRVLREMKDKG 680
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 135/464 (29%), Positives = 243/464 (52%), Gaps = 6/464 (1%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
C P+ FT+ ILIHG+CR G + A L+K+M G NV + ++I G C+A+++
Sbjct: 873 CSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSAL 932
Query: 101 RVLEIMKERNVCPNEA-TVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
+ + M+E CP + T ++V + + A L+ + + + ++LL+
Sbjct: 933 ELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHG 992
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
L EA A+L++M G P T++ + ++E +L+ + G +P
Sbjct: 993 LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 1052
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
TY +L++A K G+ + + + + V N+ +YN ++D FCK + ++RA ++
Sbjct: 1053 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 1112
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
M + PN+V++NT+I+G CK +VH+ LL +L PD TFN++ID +C+ +
Sbjct: 1113 SMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTY 1172
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM-QADRISPDIYTF 398
R + A + + + E G PN +TYN L+ LC ++ L ++M + SPDI T+
Sbjct: 1173 RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITY 1232
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
N +I C+ ++++A K F ML+ GL PD+ +YS +I +L K DEA M +
Sbjct: 1233 NTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK 1292
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFP 502
NG +P + T +++ + G ++A +I++ +G S+P
Sbjct: 1293 NGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKG----SYP 1332
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 234/477 (49%), Gaps = 1/477 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P Y+ ++D+LVKS +D A + M C P+ TY+ L+HG+C+ G +DEA L
Sbjct: 946 PDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATAL 1005
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+++M G +PN+ TY +IDG C R+ E + +LE M + PN T L+ +
Sbjct: 1006 LQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCK 1065
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
C A L+ +E+ + N+LL A +L M +G +P +
Sbjct: 1066 CGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVS 1125
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + L ++E +L+ + P T+ +++A+ K R N +
Sbjct: 1126 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 1185
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM-RDRDIAPNLVTFNTLISGHCKDAEV 306
+ N+ +YN ++ CK D+A + REM R + +P+++T+NT+I G CK V
Sbjct: 1186 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRV 1245
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ +L + +L G PD T++ +I LC+ ++A + L M++ G P ITY L
Sbjct: 1246 DRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTL 1305
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I C G++ ++L + Q + + PD+ TF+ I + ++ +A + +ML GL
Sbjct: 1306 IDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGL 1365
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
PD +Y+ L+K + ++A F M Q GC PD+ T ++ LV + +++
Sbjct: 1366 VPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKD 1422
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 230/482 (47%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P + YN +I+ L KS+ +D A ++M + P+ F+YN ++HG C+ V+ AL L
Sbjct: 228 PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 287
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++QM G P+V +YT +I+G C +V E RV++ M +R PN T +LV G R
Sbjct: 288 LEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 347
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D A EL+ + ER + N +++ + A +L+ M G P++
Sbjct: 348 VGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAIN 407
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ ++ L E +L+ I+RG +P + L++AL KA L
Sbjct: 408 YSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSI 467
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+V +Y+++I CK + A M P++VT+N+++ G CK ++
Sbjct: 468 GMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRIN 527
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
L + G PD T++ +I C+ + + A L M E P+ +TY+ LI
Sbjct: 528 DAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALI 587
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G V ++ +FQ+M +P++ T+N LI C++NK+E+A + M
Sbjct: 588 NGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCT 647
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD+ +Y+ LI L + R +EA + M+ GC PD T +L L + E +
Sbjct: 648 PDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQL 707
Query: 488 VK 489
+K
Sbjct: 708 LK 709
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 244/493 (49%), Gaps = 2/493 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMS-VDQCKPDRFTYNILIHGICRIGVVDE 63
G+ + L+N VI L + +D A F++M C PD FTY+ ++ + + G VD+
Sbjct: 907 GVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDD 966
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A RLV+ M G +PNV TY+ L+ G C A ++ E +L+ M PN T +++
Sbjct: 967 ACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIID 1026
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + +A+ LL ++ + LL A +A ++ M ++GY+P
Sbjct: 1027 GHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVP 1086
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + ++ C +L + I++G P +Y ++ L KA + EG L
Sbjct: 1087 NLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLL 1146
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + V ++ ++N +ID CK +D A E+ +++ PNLVT+N+L+ G CK
Sbjct: 1147 EQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKS 1206
Query: 304 AEVHKTRELL-VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ LL M + G PD T+N++ID LC++ R + A +M+ G+ P+ +T
Sbjct: 1207 RRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVT 1266
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y+I+I SLC + + + + M + P T+ LI FC+ ++KA + +L
Sbjct: 1267 YSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLL 1326
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ G PD ++S I L K GR +A + +M + G PD+ T N +L+ E
Sbjct: 1327 SKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTE 1386
Query: 483 EAHDIVKTSKERG 495
+A D+ + ++ G
Sbjct: 1387 DAVDLFEVMRQCG 1399
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 221/453 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P+ YN V+ K+N ++ A +QM C PD +Y +I+G+C++ VDEA
Sbjct: 260 GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEA 319
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++ +M G PNV TY L+DGFC + ++ M ER PN T +++H
Sbjct: 320 CRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHV 379
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R D +A ++L ++ + +T++ EA +L +M RG P+
Sbjct: 380 FCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPD 439
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + L ++ +L I P Y +L+ AL KA R E + +L+
Sbjct: 440 VACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLD 499
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K+R +V +YN V+D CK ++ A + MR + P++VT++ +I CKD
Sbjct: 500 VMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDN 559
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ ++L + E PD T++++I+ LC+A + A D EM+ G PN +TYN
Sbjct: 560 NLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYN 619
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI LC I V ++ + + M+ +PD T+ LI C +++E+A + M
Sbjct: 620 TLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDK 679
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
G PD +Y L++AL K+ + +Q ME
Sbjct: 680 GCLPDRMTYGTLLRALQKTNNLELVEQLLKEME 712
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/493 (28%), Positives = 240/493 (48%), Gaps = 4/493 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP+ + +I L ++ I AY ++M + +N++I G+C +D AL
Sbjct: 874 SPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALE 933
Query: 67 LVKQMEGLGYAP-NVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L K+ME G P +V+TY+ ++D + +V + R++E M + PN T SL+HG+
Sbjct: 934 LFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGL 993
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A LL R M R + +V NT++ EA +L +M D G P
Sbjct: 994 CKAGKLDEATALLQR-MTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 1052
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + + G+++ +++G P TY L++ K + L+
Sbjct: 1053 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 1112
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + V NV SYN VI CK + + +M + P++VTFNT+I CK
Sbjct: 1113 SMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTY 1172
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV-EWGVPPNTITY 363
V EL ++ E G P+ T+NS++ LC++ RF+ A L EM + G P+ ITY
Sbjct: 1173 RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITY 1232
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N +I LC V R+ +LF +M +D ++PD T++ +I S C+ +++A ML
Sbjct: 1233 NTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK 1292
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G P +Y LI K+G D+A + + G PD T ++ ++ L ++GR +
Sbjct: 1293 NGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQ 1352
Query: 484 AHDIVKTSKERGI 496
A ++++T G+
Sbjct: 1353 AGELLETMLRAGL 1365
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 210/417 (50%), Gaps = 8/417 (1%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVHGVFRCLDPHK 133
GY + YT L+ KR + L++ + + C PN T L+HG+ R D
Sbjct: 839 GYNHDTYTCNCLLQALLRLKRPKDA---LQVYRNKLCCSPNMFTFTILIHGLCRAGDIGT 895
Query: 134 AFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS-TFDYT 191
A+ELL + M R + Q ++ N ++ L + A + ++M + G P T+
Sbjct: 896 AYELL-KEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTI 954
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
V LV +++ C +++ + +G P TY L+ L KAG+ E L + +
Sbjct: 955 VDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGC 1014
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
N+ +YN +ID CK+ +D A + EM D PN+VT+ L+ CK +
Sbjct: 1015 SPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIG 1074
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
L+ +++E G+ P+ FT+NS++D C+ E A LS M++ G PN ++YN +I LC
Sbjct: 1075 LVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLC 1134
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
V + L ++M ++ PDI TFN +I + C+ +++ A + F + G P+
Sbjct: 1135 KATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLV 1194
Query: 432 SYSALIKALIKSGRFDEAKQTFLSM-EQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+Y++L+ L KS RFD+A+ M + GC+PD T N +++ L + R + A+ +
Sbjct: 1195 TYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKL 1251
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/525 (25%), Positives = 245/525 (46%), Gaps = 40/525 (7%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N +++ LVK++ A+ F+ Q D TY+ LI G R G + A L +M
Sbjct: 130 NCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNR 189
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVHGVFRCLDPH 132
G + + ++ G C+A + ++ VL + C P+ T ++++G+ +
Sbjct: 190 KGLKAHAGVHKSILRGLCDAGQCSDA--VLHFREMSKTCPPDSVTYNTMINGLSKSDRLD 247
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A LL ++ NT+L+ + A +L +M RG P+ ++ +
Sbjct: 248 DAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVI 307
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR-L 251
L ++E C ++D I+RG +P TY L++ + G D++G L +R
Sbjct: 308 NGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVG-DLDGAVELVRKMTERGY 366
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
N +YN ++ FC+ N M+RA ++ + M P+ + ++T+ISG CK ++ + +
Sbjct: 367 RPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHD 426
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA---------LDCLSEMVEWGV------ 356
LL ++ G +PD +++ID LC+A + A +DC ++V + +
Sbjct: 427 LLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALC 486
Query: 357 -----P---------------PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
P P+ +TYN ++ LC + + LF +M+A + PD+
Sbjct: 487 KAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVV 546
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
T++ +I SFC+ N ++ A K M PD +YSALI L K+G D+A F M
Sbjct: 547 TYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEM 606
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
GC P+ T N +++ L + + E+A ++++ +++ + S
Sbjct: 607 LGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSI 651
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 216/451 (47%), Gaps = 7/451 (1%)
Query: 46 FTYNILIHGICRIGVVDEALRLVK-QMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE 104
F N L++ + + +A L + ++EG + + TY+ LI GF A ++ + + +
Sbjct: 127 FCCNCLLNVLVKAHQYSQAHDLFRSRIEG-QWGGDTVTYSTLISGFIRAGKILPAYELFD 185
Query: 105 IMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF--MEREPLTQKLVCNTLLYRLSN 162
M + + + +S++ G+ D + + ++ F M + + NT++ LS
Sbjct: 186 EMNRKGLKAHAGVHKSILRGL---CDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSK 242
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+ +A +L +M D G+ P +++ + + +L+ + RG P +
Sbjct: 243 SDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVS 302
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y ++ L K + E R ++ + + NV +Y ++D FC+V +D A E+ R+M
Sbjct: 303 YTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMT 362
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+R PN +T+N ++ C+ ++ + ++L M+++ G PD ++++I C+A +
Sbjct: 363 ERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLR 422
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+A D L +M+ G P+ + LI +LC + + L + +PD+ ++ LI
Sbjct: 423 EAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILI 482
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+ C+ ++ +AE M+ PD +Y++++ L KS R ++A F M G
Sbjct: 483 HALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVM 542
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
PD T ++++ + + + A +++ KE
Sbjct: 543 PDVVTYSIVIHSFCKDNNLDSAFKMLERMKE 573
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 191/419 (45%), Gaps = 35/419 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y VI+ L K + +D A +M C+P+ TY L+ G CR+G +D A
Sbjct: 295 GCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGA 354
Query: 65 LRLVKQMEGLGYAPNVYTY-----------------------------------TILIDG 89
+ LV++M GY PN TY + +I G
Sbjct: 355 VELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISG 414
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
FC A ++ E +LE M R P+ A + +L+ + + A ELL + +
Sbjct: 415 FCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPD 474
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ + L++ L EA + L M P+ T++ V L +N+ + D
Sbjct: 475 VVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFD 534
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
GV P TY +++ + K + L + + + V +V +Y+ +I+ CK
Sbjct: 535 RMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAG 594
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+D+A ++ +EM APNLVT+NTLI G CK +V + E+L ++ + PD T+
Sbjct: 595 TVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYT 654
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+I+ LC A R E+A L EM + G P+ +TY L+R+L ++ +L ++M+A
Sbjct: 655 CLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEA 713
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 189/422 (44%), Gaps = 1/422 (0%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
GY ++ L++ A + ++ + E + T +L+ G R A
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
+EL + V ++L L + S+A R+M + P+S T++ +
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS-KTCPPDSVTYNTMING 239
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
L L++ +L+ + G P +Y ++ KA R L + +
Sbjct: 240 LSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPD 299
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
V SY VI+ CK++ +D A + +M R PN++T+ TL+ G C+ ++ EL+
Sbjct: 300 VVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVR 359
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
+ E G++P+ T+N+++ CR + E A L M++ G PP+ I Y+ +I C G
Sbjct: 360 KMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAG 419
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
+ + L ++M PD+ + LI + C+ I+ A++ + + PD +YS
Sbjct: 420 KLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYS 479
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
LI AL K+ R EA+ M +N C PD T N +++ L + R +A + +
Sbjct: 480 ILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAA 539
Query: 495 GI 496
G+
Sbjct: 540 GV 541
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 125/530 (23%), Positives = 223/530 (42%), Gaps = 53/530 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN+++D K + ++ A M C P+ +YN +I G+C+ V E
Sbjct: 1083 GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEG 1142
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L++QM P++ T+ +ID C RV + + +++E PN T SLVHG
Sbjct: 1143 VLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHG 1202
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +A LL ++ + ++ NT++ L + A + +M G P
Sbjct: 1203 LCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAP 1262
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ ++ L ++E +L+ +K G P TY L++ K G + L
Sbjct: 1263 DDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEIL 1322
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +V ++++ ID K + +A E+ M + P+ VT+NTL+ G C
Sbjct: 1323 QLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDA 1382
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE-MVEWGVPPN--- 359
+ +L ++ +CG +PD T+ +++ L ++D L +S+ MV+ G N
Sbjct: 1383 SLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHEL 1442
Query: 360 ------TITYNILIRSLCAIGDV------------------------------------- 376
+I +R CAI D+
Sbjct: 1443 SSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQ 1502
Query: 377 -ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM-LTLGLRPDNFSYS 434
++ L++ M + + PD TF +L+ C ++ A F S+ GL P +S
Sbjct: 1503 EEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFS 1562
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+I L + G +EA+ L M C P + T N +L G FE A
Sbjct: 1563 CVIDLLGRLGLVNEAEDLMLGMP---CKPSAATWNCLLSAYKICGDFERA 1609
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 175/405 (43%), Gaps = 39/405 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP YN VID L KS +D AY F QM D PD TY+I+I +C+ +DEA
Sbjct: 1224 GCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEA 1283
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ M G+ P TY LIDGFC + + +L+++ + P+ T +
Sbjct: 1284 NNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDW 1343
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A ELL + + + NTLL + S+ +A + M G P+
Sbjct: 1344 LSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPD 1403
Query: 185 SSTFDYTVTCLV------------------TGLDLN-ETCGILDTFIKRGVKPRFSTYLL 225
++T+ V LV TG LN E L+ I+ R ++
Sbjct: 1404 NATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIV 1463
Query: 226 LMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
M + +D VF+ NV ++ ++ + ++A + R M
Sbjct: 1464 DMFGKCGSPQDAR------KVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEG 1517
Query: 286 IAPNLVTFNTLISGHCK----DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+ P+ VTF +L++ C DA V E + + + G +P F+ +ID L R
Sbjct: 1518 VEPDAVTFLSLLTMCCHAGLLDAAVD---EFVSISRDYGLEPGVDHFSCVIDLLGRLGLV 1574
Query: 342 EDALDCLSEMVEWGVP--PNTITYNILIRSLCAIGDVARSLRLFQ 384
+A D + G+P P+ T+N L+ + GD R+LR+ +
Sbjct: 1575 NEAEDLM-----LGMPCKPSAATWNCLLSAYKICGDFERALRVAE 1614
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/498 (28%), Positives = 250/498 (50%), Gaps = 1/498 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P +N ++ +LVK A F+QM V +PD FT NILI+ C +G + +
Sbjct: 7 TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++ ++ LGY PN T L+ G C V + + + + ++ + +L++G+
Sbjct: 67 VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + A +LL +R ++ NT++ L + + +EA + +M RG P
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L E G+L+ I + + P TY +LM+AL K G+ E L +
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K+ + NV SYN ++D +C + + A ++ M + + PN+ ++N +I CK V
Sbjct: 247 TKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRV 306
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ LL +L P+ T++S+ID C+ R ALD L EM G P + +TY L
Sbjct: 307 DEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSL 366
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ +LC ++ ++ LF KM+ I P+ YT+ ALI C+ + + A+K F +L G
Sbjct: 367 LDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGC 426
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
R + ++Y+ +I L K G DEA ME+NGC PD+ T +I+ +L ++ + ++A
Sbjct: 427 RINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEK 486
Query: 487 IVKTSKERG-ISFKSFPG 503
++ + + F+ F G
Sbjct: 487 LLHEMIAKDLLRFRDFHG 504
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 130/308 (42%), Gaps = 35/308 (11%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P+ Y ++DAL K + A M+ + KP+ +YN L+ G C IG V A
Sbjct: 216 INPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAK 275
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
++ M G PNVY+Y I+ID C +KRV E +L + +N+ PN T SL+ G
Sbjct: 276 QMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGF 335
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ A +LL R + +LL L N +A A+ KM +RG P
Sbjct: 336 CKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNK 395
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
YT T L+ GL C K GR + H
Sbjct: 396 ----YTYTALIDGL-----C--------------------------KGGRHKNAQKLFQH 420
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ NV +YN++I CK M+D A + +M + P+ VTF +I + +
Sbjct: 421 LLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQ 480
Query: 306 VHKTRELL 313
K +LL
Sbjct: 481 NDKAEKLL 488
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 110/248 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN ++D + A F M P+ ++YNI+I +C+ VDEA
Sbjct: 250 GVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEA 309
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L++++ PN TY+ LIDGFC R+ +L+ M R + T SL+
Sbjct: 310 MNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDA 369
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + KA L ++ ER K L+ L A + + + +G
Sbjct: 370 LCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRIN 429
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ ++ L L+E + + G P T+ +++ +L++ ++ + ++ L+
Sbjct: 430 VWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLH 489
Query: 245 HVFKDRLV 252
+ L+
Sbjct: 490 EMIAKDLL 497
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
R +P I FN ++ S +M A F M G+ PD F+ + LI G+ +
Sbjct: 5 RDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFS 64
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA---HDIV 488
+ + G P++ T N +++ L +G +++ HD V
Sbjct: 65 FTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKV 106
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 145/496 (29%), Positives = 248/496 (50%), Gaps = 10/496 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L +SP T ++ +ID L K ID A F M P+ TYN L++G+C+ ++
Sbjct: 354 LRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMER 413
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +++ M G P+V TY++L+D FC A RV E +L M R PN T S++
Sbjct: 414 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 473
Query: 124 GVFRCLDPHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + +AF++ + L K+ TL+ L A +A A+L M D
Sbjct: 474 GLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD---- 529
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P++ F+ + L D++ + + ++ + P T+ +L+ KAG +
Sbjct: 530 PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASAL 589
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ L +V ++ +ID CK ++ A +I M + + PN+VT+N L+ G CK
Sbjct: 590 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCK 649
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + L ++ G PD T+ S++ LCRA R +DAL +SE+ +G P+T+T
Sbjct: 650 SGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVT 709
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YNIL+ L G +++ + ++M PD+ T+N LI S C+ +E+A + M
Sbjct: 710 YNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMS 769
Query: 423 TLGLR---PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN--PDSYTSNLILETLVQ 477
+ R P+ +YS LI L K GR DEA++ M + C+ P+ T N L+ L +
Sbjct: 770 SRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCK 829
Query: 478 QGRFEEAHDIVKTSKE 493
Q EA +++++ ++
Sbjct: 830 QSMMAEACELMRSLRD 845
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 139/487 (28%), Positives = 255/487 (52%), Gaps = 10/487 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P T +N I+ L K + A + +M + PD+ T+NILI G C+ G ++A L
Sbjct: 530 PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASAL 589
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++M P+V T+ LIDG C A +V +L++M V PN T +LVHG+ +
Sbjct: 590 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCK 649
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+A + L + + + +L+Y L S +A ++ ++ G+ P++ T
Sbjct: 650 SGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVT 709
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ V L + +L+ + +G P TY L+++L KAG D+E R L+
Sbjct: 710 YNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAG-DLEEARRLHGDM 768
Query: 248 KDRL----VSNVNSYNMVIDCFCKVNMMDRATEICREMRDR--DIAPNLVTFNTLISGHC 301
R+ V NV +Y+++I+ CKV +D A E+ +EM + D+ PN++T+N+ + G C
Sbjct: 769 SSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLC 828
Query: 302 KDAEVHKTRELLVMLLECGFK--PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
K + + + EL+ L + + PD TF+++ID LC+ + ++A + +M+ G PN
Sbjct: 829 KQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPN 888
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+TYN+L+ LC + R+ + + M ++PD+ T++ L+ +FC+ + +++A +
Sbjct: 889 VVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLH 948
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME-QNGCNPDSYTSNLILETLVQQ 478
M + G P+ +++++I L KS + EA Q F M ++G PD T +++ L +
Sbjct: 949 GMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRT 1008
Query: 479 GRFEEAH 485
G +A
Sbjct: 1009 GWAGQAE 1015
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 155/528 (29%), Positives = 243/528 (46%), Gaps = 73/528 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ YN +I+ L KSN + F+++ PD TYN LI +C+ G ++EA
Sbjct: 211 GVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEA 270
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER--NVCPNEATVRSLV 122
RL M PNV TY++LI+G C R+ E +++ M + +V PN T S +
Sbjct: 271 RRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFL 330
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G L SM +EA ++R + D G L
Sbjct: 331 DG-----------------------------------LCKQSMTAEACELMRSLRD-GSL 354
Query: 183 ---PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
P++ TF + L ++E C + D I G P TY L+ L KA +
Sbjct: 355 RVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERA 414
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + + +V +Y++++D FCK + +D A E+ M R PN+VTFN++I G
Sbjct: 415 HAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDG 474
Query: 300 HCKDAEVHKTRELL-VMLLECGFKPDKFTFNSMIDCL---CRAHRFEDALDCLSE----- 350
CK + ++ M L+ G PDK T+ ++ID L RA + E LD + +
Sbjct: 475 LCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYA 534
Query: 351 -----------------------MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
M+E + P+ +T+NILI C G+ ++ LF++M
Sbjct: 535 FNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMV 594
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
A + PD+ TF ALI C+ ++E A M LG+ P+ +Y+AL+ L KSGR +
Sbjct: 595 AKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIE 654
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
EA Q M +GC PDS T ++ L + R ++A +V K G
Sbjct: 655 EACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 702
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 138/516 (26%), Positives = 241/516 (46%), Gaps = 36/516 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN +ID+L K+ ++ A MS C P+ TY++LI+G+C++G +DEA
Sbjct: 246 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEA 305
Query: 65 LRLVKQM--EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN--VCPNEATVRS 120
L+++M + PN+ TY +DG C AE ++ +++ + V P+ T +
Sbjct: 306 RELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFST 365
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G+ +C +A + + + + N L+ L A A++ M D+G
Sbjct: 366 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 425
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG- 239
P+ T+ V ++E +L RG P T+ +++ L K+ R E
Sbjct: 426 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAF 485
Query: 240 ----DRYLNH-VFKDRLV--------------------------SNVNSYNMVIDCFCKV 268
D L H + D++ + ++N I+ K+
Sbjct: 486 QMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKL 545
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+ RA ++ M + ++ P+ VTFN LI+G CK + L ++ +PD TF
Sbjct: 546 GDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTF 605
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
++ID LC+A + E A D L M GVPPN +TYN L+ LC G + + + ++M +
Sbjct: 606 GALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVS 665
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
PD T+ +L+ + CR ++ + A + + + G PD +Y+ L+ L KSG+ ++
Sbjct: 666 SGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQ 725
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
A M G +PD T N ++++L + G EEA
Sbjct: 726 AITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEA 761
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 143/532 (26%), Positives = 253/532 (47%), Gaps = 39/532 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YNA+++ L K++ ++ A+ + M PD TY++L+ C+ VDEA
Sbjct: 390 GYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 449
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK-ERNVCPNEATVRSLVH 123
L L+ M G PNV T+ +IDG C + R E F++ + M + + P++ T +L+
Sbjct: 450 LELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLID 509
Query: 124 GVFR------------------------CL-------DPHKAFELLIRFMEREPLTQKLV 152
G+FR C+ D +A ++ R +E E + K+
Sbjct: 510 GLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVT 569
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
N L+ +A+A+ +M + P+ TF + L + ILD
Sbjct: 570 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 629
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
GV P TY L+ L K+GR E ++L + V + +Y ++ C+ + D
Sbjct: 630 NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 689
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A ++ E++ P+ VT+N L+ G K + + +L ++ G PD T+N++I
Sbjct: 690 DALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLI 749
Query: 333 DCLCRAHRFEDALDCLSEM---VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM--Q 387
D LC+A E+A +M V PN +TY++LI LC +G + + L Q+M +
Sbjct: 750 DSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRK 809
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR--PDNFSYSALIKALIKSGR 445
+ + P+I T+N+ + C+ + + +A + S+ LR PD ++S LI L K G+
Sbjct: 810 SCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQ 869
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
DEA F M G P+ T N+++ L + + E AH ++++ ++G++
Sbjct: 870 TDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVT 921
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 140/496 (28%), Positives = 242/496 (48%), Gaps = 21/496 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ YNA++ L KS I+ A ++M C PD TY L++ +CR D+
Sbjct: 631 LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDD 690
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL+LV +++ G+ P+ TY IL+DG + + + VLE M + P+ T +L+
Sbjct: 691 ALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLID 750
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA-----SEAAAILRKMGD 178
+ + D +A L R +++ V N + Y + N + EA ++++M
Sbjct: 751 SLCKAGDLEEARRLHGDMSSR--VSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMR 808
Query: 179 RG--YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRG---VKPRFSTYLLLMEALYKA 233
+ LP T++ + L + E C ++ + ++ G V P T+ L++ L K
Sbjct: 809 KSCDVLPNIITYNSFLDGLCKQSMMAEACELMRS-LRDGSLRVSPDTVTFSTLIDGLCKC 867
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
G+ E + + V NV +YN++++ CK + M+RA + M D+ + P+++T+
Sbjct: 868 GQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITY 927
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM-V 352
+ L+ CK + V + ELL + G P+ TFNS+ID LC++ + +A +M +
Sbjct: 928 SVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTL 987
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
+ G+ P+ ITY LI L G ++ L M PD Y FN I ++K+
Sbjct: 988 KHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP----DPDTYAFNCCING---LSKLG 1040
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
+A ML L L PD +++ LI K+G F++A F M PD T ++
Sbjct: 1041 DVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALI 1100
Query: 473 ETLVQQGRFEEAHDIV 488
+ L + G+ E DI+
Sbjct: 1101 DGLCKAGQVEATWDIM 1116
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 151/287 (52%), Gaps = 8/287 (2%)
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNH-VFKDRLVSNVNSYNMVIDCFCKVNMMDRAT 275
+P TY L+ A YKAG DVE R L +V YN+V+ C+ RA
Sbjct: 143 RPNHFTYSTLLRATYKAGGDVE--RTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARAL 200
Query: 276 EICR-EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
EI R EM +AP +VT+NT+I+G CK E+ EL L+E G PD T+N++ID
Sbjct: 201 EIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDS 260
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM--QADRIS 392
LC+A E+A +M PN +TY++LI LC +G + + L Q+M ++ +
Sbjct: 261 LCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVL 320
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR--PDNFSYSALIKALIKSGRFDEAK 450
P+I T+N+ + C+ + +A + S+ LR PD ++S LI L K G+ DEA
Sbjct: 321 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEAC 380
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
F M G P+ T N ++ L + + E AH ++++ ++G++
Sbjct: 381 SVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVT 427
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 4/240 (1%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
S+N ++ K +A ++ R PN T++TL+ K A R L
Sbjct: 113 SFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYK-AGGDVERTLGFFR 171
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCL-SEMVEWGVPPNTITYNILIRSLCAIGD 375
+N ++ LCRA AL+ EM GV P +TYN +I LC +
Sbjct: 172 RIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNE 231
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+ + LF+++ PD+ T+N LI S C+ +E+A + M + P+ +YS
Sbjct: 232 LGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSV 291
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCN--PDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
LI L K GR DEA++ M + C+ P+ T N L+ L +Q EA +++++ ++
Sbjct: 292 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 351
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 35/205 (17%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY---------------- 363
GFK F+FN ++ L ++ A+D + PN TY
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVER 165
Query: 364 ------------------NILIRSLCAIGDVARSLRLFQ-KMQADRISPDIYTFNALIQS 404
NI+++SLC G+ AR+L +F+ +M D ++P I T+N +I
Sbjct: 166 TLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIING 225
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
C+ N++ + F ++ G PD +Y+ LI +L K+G +EA++ M C P+
Sbjct: 226 LCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPN 285
Query: 465 SYTSNLILETLVQQGRFEEAHDIVK 489
T ++++ L + GR +EA ++++
Sbjct: 286 VVTYSVLINGLCKVGRIDEARELIQ 310
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 142/489 (29%), Positives = 238/489 (48%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ R YN ++ +L K ID + ++ +Q P+ +T+N +++G C+IG V EA
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ G P+ +TYT LI G C K V + V IM ++ NE + +L+HG+
Sbjct: 217 ASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCE 276
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
++A +L E L+Y LS + EA + +M ++G P T
Sbjct: 277 AGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHT 336
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + L ++E +L ++G+ P TY L++ K G + L+ +
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ N +YN +I CK + +A + +M +R ++P+L+T+N+LI G CK ++
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLE 456
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
LL ++ E G PD++T++ ID LC+ R E+A + GV N + Y LI
Sbjct: 457 SAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALI 516
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
C +G + + L ++M D P+ YT+N LI+ C+ K+++A MLT+G++
Sbjct: 517 DGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVK 576
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P +Y+ LI ++K G FD A + F M G PD T L QG EE D+
Sbjct: 577 PTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDV 636
Query: 488 VKTSKERGI 496
+ E GI
Sbjct: 637 IAKMNEEGI 645
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 145/506 (28%), Positives = 226/506 (44%), Gaps = 24/506 (4%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y +I L ++ I+ A F M+ D C P TY +LI+ + G EAL L +M+
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G PNV+TYT+LIDG C ++ E ++L M E+ + P+ T +L+ G +
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386
Query: 133 KAFELLIRFMERE---PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
AFE+L ME P T+ N L+ L +A A+L KM +R P T++
Sbjct: 387 DAFEIL-DLMESNSCGPNTRTY--NELICGLCKKRKVHKAMALLNKMLERKLSPSLITYN 443
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
+ DL +L + G+ P TY + ++ L K GR E + V
Sbjct: 444 SLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAK 503
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
+ +N Y +ID +CKV +D A + M + PN T+N LI G CK+ ++ +
Sbjct: 504 GVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEA 563
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
L+ +L G KP T+ +I + + F+ AL + MV G P+ TY + +
Sbjct: 564 SSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHA 623
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
+ G + + KM + I PD+ T+ LI + R+ +A M+ G +P
Sbjct: 624 YFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPS 683
Query: 430 NFSYSALIKALIKSGRFDEAK------------------QTFLSMEQNGCNPDSYTSNLI 471
+ S LIK L R E + + F M ++GC D +
Sbjct: 684 LYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGAL 743
Query: 472 LETLVQQGRFEEAHDIVKTSKERGIS 497
+ QQ R EEA +V KERG+S
Sbjct: 744 IAGFCQQERLEEAQGLVHHMKERGMS 769
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 130/507 (25%), Positives = 227/507 (44%), Gaps = 18/507 (3%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ R Y +I AL S A F +M C+P+ TY +LI G+C+ +DEA ++
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKM 356
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M G P+V TY LIDG+C + + F +L++M+ + PN T L+ G+ +
Sbjct: 357 LSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCK 416
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
HKA LL + +ER+ + N+L++ + A +L M + G +P+ T
Sbjct: 417 KRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWT 476
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + L + E + D+ +GVK Y L++ K G+ L +
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
D + N +YN++I+ CK M A+ + +M + P +VT+ LI KD
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFD 596
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
++ ++ G++PD T+ + + E+ D +++M E G+ P+ +TY +LI
Sbjct: 597 HALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI---------------- 411
+G R+ + M P +Y + LI++ N++
Sbjct: 657 DGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTL 716
Query: 412 --EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
E A K F M+ G D Y ALI + R +EA+ M++ G +P N
Sbjct: 717 EYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYN 776
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGI 496
+L+ + G + EA +V E G+
Sbjct: 777 SLLDCCCKLGVYAEAVRLVDAMVENGL 803
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/487 (24%), Positives = 215/487 (44%), Gaps = 18/487 (3%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
P+TR YN +I L K + A +M + P TYN LIHG C++ ++ A R
Sbjct: 401 GPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYR 460
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L+ M G P+ +TY++ ID C RV E + + +K + V NE +L+ G
Sbjct: 461 LLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYC 520
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A+ LL R + L N L+ L EA++++ KM G P
Sbjct: 521 KVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVV 580
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + ++ + + + + G +P TY + A + G E D + +
Sbjct: 581 TYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM 640
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
++ ++ ++ +Y ++ID + ++ + RA + + M D P+L + LI + +
Sbjct: 641 NEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRM 700
Query: 307 HKTR------------------ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+TR +L ++E G D + ++I C+ R E+A +
Sbjct: 701 KETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLV 760
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
M E G+ P+ YN L+ C +G A ++RL M + + P + ++ L+
Sbjct: 761 HHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIE 820
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
EKA+ F +L+ G D ++ LI L+K DE + ME+ GC P+ T
Sbjct: 821 GSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTY 880
Query: 469 NLILETL 475
+L++E L
Sbjct: 881 SLLIEGL 887
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 129/544 (23%), Positives = 224/544 (41%), Gaps = 53/544 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y +ID L K N +D A +MS P TYN LI G C+ G++D+A
Sbjct: 329 GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDA 388
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ ME PN TY LI G C ++V + +L M ER + P+ T SL+HG
Sbjct: 389 FEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHG 448
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA-------------- 170
+ D A+ LL E + + + + L EA
Sbjct: 449 QCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKAN 508
Query: 171 ---------------------AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
++L +M + LP S T++ + L + E ++
Sbjct: 509 EVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVA 568
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+ GVKP TY +L+ + K G + NH+ +V +Y + +
Sbjct: 569 KMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQG 628
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
M++ ++ +M + I P+LVT+ LI G+ + H+ + L +++ G KP + +
Sbjct: 629 MLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVS 688
Query: 330 SMIDCLCRAHR------------------FEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
+I L +R +E AL +MVE G + Y LI C
Sbjct: 689 ILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFC 748
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
+ + L M+ +SP +N+L+ C++ +A + +M+ GL P
Sbjct: 749 QQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLE 808
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
SY L+ L G ++AK F + G N D ++++ L+++ +E +++
Sbjct: 809 SYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIM 868
Query: 492 KERG 495
+E+G
Sbjct: 869 EEKG 872
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 132/252 (52%)
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ +++ N+ ++N +++ +CK+ + A ++ + P+ T+ +LI GHC++
Sbjct: 185 LLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKG 244
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V E+ +++ + G + ++ ++ ++I LC A R +AL ++M E P TY +
Sbjct: 245 VDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTV 304
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI +L G +L LF +M+ P+++T+ LI C+ NK+++A K M G
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
L P +Y+ALI K G D+A + ME N C P++ T N ++ L ++ + +A
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424
Query: 486 DIVKTSKERGIS 497
++ ER +S
Sbjct: 425 ALLNKMLERKLS 436
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 153/363 (42%), Gaps = 38/363 (10%)
Query: 172 ILRKM---GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
+ RKM G+ + P ++ + L L ++E + + + P T+ ++
Sbjct: 143 VFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVN 202
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
K G VE + Y + + + L + +Y +I C+ +D A E+ M +
Sbjct: 203 GYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQR 262
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
N V++ LI G C+ +++ +L + E P T+ +I L + R +AL+
Sbjct: 263 NEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLF 322
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
+EM E G PN TY +LI LC + + ++ +M + P + T+NALI +C+
Sbjct: 323 NEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKE 382
Query: 409 N-----------------------------------KIEKAEKAFFSMLTLGLRPDNFSY 433
K+ KA ML L P +Y
Sbjct: 383 GMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITY 442
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
++LI K + A + M +NG PD +T ++ ++TL ++GR EEA + + K
Sbjct: 443 NSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKA 502
Query: 494 RGI 496
+G+
Sbjct: 503 KGV 505
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 130/314 (41%), Gaps = 18/314 (5%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ Y +I ++K + D A F M +PD TY +H G+++E
Sbjct: 573 MGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEE 632
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPN----EATVR 119
++ +M G P++ TYT+LIDG+ F L+ M + P+ ++
Sbjct: 633 VDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIK 692
Query: 120 SLVH--------------GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSM 165
+L H V L+ A +L + +E + L+
Sbjct: 693 NLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQER 752
Query: 166 ASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLL 225
EA ++ M +RG P ++ + C E ++D ++ G+ P +Y L
Sbjct: 753 LEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKL 812
Query: 226 LMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
L+ LY G + + + + + ++ ++ID K +++D +E+ M ++
Sbjct: 813 LVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKG 872
Query: 286 IAPNLVTFNTLISG 299
PN +T++ LI G
Sbjct: 873 CQPNPLTYSLLIEG 886
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 23/188 (12%)
Query: 320 GFKPDKFTFNSMIDCLCRAH-----------------RFEDALDCLSEM------VEWGV 356
GFK + +++SM++ L RA ED L L E+
Sbjct: 96 GFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKF 155
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
P YN ++ SL + ++ ++ ++ISP+IYTFNA++ +C++ + +AE
Sbjct: 156 KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAEL 215
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
++ GL PD F+Y++LI ++ D A + FL M Q GC + + ++ L
Sbjct: 216 YASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLC 275
Query: 477 QQGRFEEA 484
+ GR EA
Sbjct: 276 EAGRINEA 283
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SPS +YN+++D K A M + P +Y +L+ G+ G ++A
Sbjct: 767 GMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKA 826
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + GY + + +LIDG V E +++IM+E+ PN T L+ G
Sbjct: 827 KAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEG 886
Query: 125 VFR 127
+ R
Sbjct: 887 LER 889
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 142/489 (29%), Positives = 238/489 (48%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ R YN ++ +L K ID + ++ +Q P+ +T+N +++G C+IG V EA
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ G P+ +TYT LI G C K V + V IM ++ NE + +L+HG+
Sbjct: 217 ASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCE 276
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
++A +L E L+Y LS + EA + +M ++G P T
Sbjct: 277 AGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHT 336
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + L ++E +L ++G+ P TY L++ K G + L+ +
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ N +YN +I CK + +A + +M +R ++P+L+T+N+LI G CK ++
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLE 456
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
LL ++ E G PD++T++ ID LC+ R E+A + GV N + Y LI
Sbjct: 457 SAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALI 516
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
C +G + + L ++M D P+ YT+N LI+ C+ K+++A MLT+G++
Sbjct: 517 DGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVK 576
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P +Y+ LI ++K G FD A + F M G PD T L QG EE D+
Sbjct: 577 PTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDV 636
Query: 488 VKTSKERGI 496
+ E GI
Sbjct: 637 IAKMNEEGI 645
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 227/490 (46%), Gaps = 6/490 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ R Y +I AL S A F +M C+P+ TY +LI G+C+ +DEA ++
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKM 356
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M G P+V TY LIDG+C + + F +L++M+ + PN T L+ G+ +
Sbjct: 357 LSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCK 416
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
HKA LL + +ER+ + N+L++ + A +L M + G +P+ T
Sbjct: 417 KRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWT 476
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + L + E + D+ +GVK Y L++ K G+ L +
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
D + N +YN++I+ CK M A+ + +M + P +VT+ LI KD
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFD 596
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
++ ++ G++PD T+ + + E+ D +++M E G+ P+ +TY +LI
Sbjct: 597 HALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+G R+ + M P +Y + LI++ N++++ +G+
Sbjct: 657 DGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRS------EIGID 710
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+ S I + K+ ++ A + F M ++GC D ++ QQ R EEA +
Sbjct: 711 SVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGL 770
Query: 488 VKTSKERGIS 497
V KERG+S
Sbjct: 771 VHHMKERGMS 780
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 221/479 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P T Y ++I ++ +D AY F M C+ + +Y LIHG+C G ++EA
Sbjct: 224 GLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEA 283
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L M P V TYT+LI + R E + MKE+ PN T L+ G
Sbjct: 284 LKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDG 343
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A ++L E+ + + N L+ M +A IL M P
Sbjct: 344 LCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPN 403
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + L +++ +L+ ++R + P TY L+ K R L+
Sbjct: 404 TRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLS 463
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ LV + +Y++ ID CK ++ A + ++ + + N V + LI G+CK
Sbjct: 464 LMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG 523
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ LL +L P+ +T+N +I+ LC+ + ++A +++M+ GV P +TY
Sbjct: 524 KIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYT 583
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
ILI + G +L++F M + PD+ T+ A + ++ +E+ + M
Sbjct: 584 ILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEE 643
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ PD +Y+ LI + G A M GC P Y +++++ L + R +E
Sbjct: 644 GILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKE 702
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/481 (24%), Positives = 205/481 (42%), Gaps = 29/481 (6%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
P+TR YN +I L K + A +M + P TYN LIHG C++ ++ A R
Sbjct: 401 GPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYR 460
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L+ M G P+ +TY++ ID C RV E + + +K + V NE +L+ G
Sbjct: 461 LLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYC 520
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A+ LL R + L N L+ L EA++++ KM G P
Sbjct: 521 KVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVV 580
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + ++ + + + + G +P TY + A + G E D + +
Sbjct: 581 TYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM 640
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD--- 303
++ ++ ++ +Y ++ID + ++ + RA + + M D P+L + LI +
Sbjct: 641 NEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRM 700
Query: 304 --------------------AEVHKTRE------LLVMLLECGFKPDKFTFNSMIDCLCR 337
A+V KT E L ++E G D + ++I C+
Sbjct: 701 KETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQ 760
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
R E+A + M E G+ P+ YN L+ C +G A ++RL M + + P + +
Sbjct: 761 QERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLES 820
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+ L+ EKA+ F +L+ G D ++ LI L+K DE + ME
Sbjct: 821 YKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIME 880
Query: 458 Q 458
+
Sbjct: 881 E 881
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 132/252 (52%)
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ +++ N+ ++N +++ +CK+ + A ++ + P+ T+ +LI GHC++
Sbjct: 185 LLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKG 244
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V E+ +++ + G + ++ ++ ++I LC A R +AL ++M E P TY +
Sbjct: 245 VDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTV 304
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI +L G +L LF +M+ P+++T+ LI C+ NK+++A K M G
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
L P +Y+ALI K G D+A + ME N C P++ T N ++ L ++ + +A
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424
Query: 486 DIVKTSKERGIS 497
++ ER +S
Sbjct: 425 ALLNKMLERKLS 436
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 153/363 (42%), Gaps = 38/363 (10%)
Query: 172 ILRKM---GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
+ RKM G+ + P ++ + L L ++E + + + P T+ ++
Sbjct: 143 VFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVN 202
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
K G VE + Y + + + L + +Y +I C+ +D A E+ M +
Sbjct: 203 GYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQR 262
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
N V++ LI G C+ +++ +L + E P T+ +I L + R +AL+
Sbjct: 263 NEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLF 322
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
+EM E G PN TY +LI LC + + ++ +M + P + T+NALI +C+
Sbjct: 323 NEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKE 382
Query: 409 N-----------------------------------KIEKAEKAFFSMLTLGLRPDNFSY 433
K+ KA ML L P +Y
Sbjct: 383 GMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITY 442
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
++LI K + A + M +NG PD +T ++ ++TL ++GR EEA + + K
Sbjct: 443 NSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKA 502
Query: 494 RGI 496
+G+
Sbjct: 503 KGV 505
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 53/206 (25%)
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
L GFK + +++SM++ L RA L ++E + +I+S C+I DV
Sbjct: 93 LRPGFKHNVHSYSSMLNILIRAR-----LLGVAEKIRIS----------MIKSCCSIEDV 137
Query: 377 ARSLRLFQKMQAD--------------------------------------RISPDIYTF 398
L +F+KM AD +ISP+IYTF
Sbjct: 138 LFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTF 197
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
NA++ +C++ + +AE ++ GL PD F+Y++LI ++ D A + FL M Q
Sbjct: 198 NAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQ 257
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEA 484
GC + + ++ L + GR EA
Sbjct: 258 KGCQRNEVSYTNLIHGLCEAGRINEA 283
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 125/315 (39%), Gaps = 37/315 (11%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ Y +I ++K + D A F M +PD TY +H G+++E
Sbjct: 573 MGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEE 632
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPN----EATVR 119
++ +M G P++ TYT+LIDG+ F L+ M + P+ ++
Sbjct: 633 VDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIK 692
Query: 120 SLVH-------------------------GVFRCLDPHKAFELLIRFMEREPLTQKLVCN 154
+L H V++ L+ A +L + +E +
Sbjct: 693 NLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYG 752
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
L+ EA ++ M +RG P ++ + C E ++D ++
Sbjct: 753 ALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVEN 812
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVN----SYNMVIDCFCKVNM 270
G+ P +Y LL+ LY G + + VF L N ++ ++ID K ++
Sbjct: 813 GLLPLLESYKLLVCGLYIEGSNEKAKA----VFHGLLSCGYNYDEVAWKVLIDGLLKRDL 868
Query: 271 MDRATEICREMRDRD 285
+D +E+ M ++D
Sbjct: 869 VDECSELIDIMEEKD 883
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%)
Query: 2 SFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
S +GI + + + I + K+ ++A F++M C D Y LI G C+ +
Sbjct: 705 SEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERL 764
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
+EA LV M+ G +P+ Y L+D C AE R+++ M E + P + + L
Sbjct: 765 EEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLL 824
Query: 122 VHGVF 126
V G++
Sbjct: 825 VCGLY 829
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 141/449 (31%), Positives = 238/449 (53%), Gaps = 3/449 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SPS YN ++D L ++ ++ A FQ+M +D+ D ++NIL+ G+CR G ++ AL
Sbjct: 42 SPSMVTYNTLLDGLFRTGKLERAMALFQEM-LDRRSHDVISFNILVTGLCRAGKIETALE 100
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++M+ +PNV TY++LIDG C A RV++ +LE MK R P+ T LV G+
Sbjct: 101 FFRKMDDR-CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLC 159
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A+E+L ++ + + N+LL+ L S+A A++R M RG P
Sbjct: 160 KESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVV 219
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L + + C +L I +G P Y +L+ L KA + E L
Sbjct: 220 TYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRA 279
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ +V +Y+ VI C+ N +D A + ++ R P+++ ++TLI G CK +V
Sbjct: 280 VSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKV 339
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ +L ++ G D T++++ID LC+A R ++A L+ MV G PP+T+TYN L
Sbjct: 340 DEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSL 399
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS-MLTLG 425
I+ LC + + ++ L ++M+ +P T+N LI CRM +++ A +F M+ G
Sbjct: 400 IKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNG 459
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+ PD+ +YS L++ L KS E + L
Sbjct: 460 VIPDHITYSILLEGLKKSKDLHELRHLVL 488
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 221/480 (46%), Gaps = 37/480 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN++ID L K+N D A F+ M +C P TYN L+ G+ R G ++ A
Sbjct: 5 GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 64
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L ++M + +V ++ IL+ G C A ++ M +R PN T L+ G
Sbjct: 65 MALFQEMLDR-RSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDG 122
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A ELL R + L+ L S + A +LR+M D G +P
Sbjct: 123 LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN 182
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L +++ ++ RG P
Sbjct: 183 LVTYNSLLHGLCRARRVSDALALMRDMTCRGCTP-------------------------- 216
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
NV +Y +ID CKV + A + +M D+ P+L+ +N LI+G CK
Sbjct: 217 ---------NVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKAD 267
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V ++ LL + G KPD T++S+I LCR++R ++A L + G PP+ I Y+
Sbjct: 268 QVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYS 327
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI LC G V + L++ M D D+ T++ LI C+ ++++A M+ +
Sbjct: 328 TLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRM 387
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G P +Y++LIK L DEA + ME++ C P + T N+++ + + R + A
Sbjct: 388 GTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSA 447
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 189/415 (45%), Gaps = 37/415 (8%)
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M G PNV TY LIDG C + E MK P+ T +L+ G+FR
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A L ++R + N L+ L A RKM DR
Sbjct: 61 LERAMALFQEMLDRRS-HDVISFNILVTGLCRAGKIETALEFFRKMDDR----------- 108
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
P TY +L++ L KA R + L +
Sbjct: 109 -------------------------CSPNVITYSVLIDGLCKANRVSQAVELLESMKARG 143
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+V +Y +++D CK + + A E+ REM D PNLVT+N+L+ G C+ V
Sbjct: 144 CSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDAL 203
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
L+ + G P+ T+ ++ID LC+ R +DA L++M++ G P+ + YN+LI L
Sbjct: 204 ALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGL 263
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C V S+ L ++ + I PD+ T++++I CR N++++A + + + G PD
Sbjct: 264 CKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDV 323
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
YS LI L K+G+ DEA + M +GC+ D T + +++ L + GR +EAH
Sbjct: 324 ILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAH 378
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 185/390 (47%), Gaps = 37/390 (9%)
Query: 106 MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSM 165
M++ PN T SL+ G+ + +P +A EL E + NTLL L
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 166 ASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLL 225
A A+ ++M DR S + LVTGL
Sbjct: 61 LERAMALFQEMLDR-----RSHDVISFNILVTGL-------------------------- 89
Query: 226 LMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
+AG+ +E DR NV +Y+++ID CK N + +A E+ M+ R
Sbjct: 90 -----CRAGK-IETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARG 143
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
+P+++T+ L+ G CK+++V E+L +L+ G P+ T+NS++ LCRA R DAL
Sbjct: 144 CSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDAL 203
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+ +M G PN +TY LI LC +G V + + M +PD+ +N LI
Sbjct: 204 ALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGL 263
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
C+ ++++++ ++ G++PD +YS++I L +S R DEA + L ++ GC PD
Sbjct: 264 CKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDV 323
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ +++ L + G+ +EA D+ + G
Sbjct: 324 ILYSTLIDGLCKAGKVDEAFDLYEVMTGDG 353
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 169/386 (43%), Gaps = 38/386 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP Y ++D L K + + A+ ++M C P+ TYN L+HG+CR V +A
Sbjct: 143 GCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDA 202
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L++ M G PNV TY LIDG C RV + +L M ++ P+ L++G
Sbjct: 203 LALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLING 262
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
L E+ A+LR+ G P+
Sbjct: 263 -----------------------------------LCKADQVDESIALLRRAVSGGIKPD 287
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L L+E C +L RG P Y L++ L KAG+ E
Sbjct: 288 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 347
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D ++V +Y+ +ID CK +D A + M P+ +T+N+LI G C
Sbjct: 348 VMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLN 407
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED-ALDCLSEMVEWGVPPNTITY 363
+ + EL+ + P T+N +I +CR R + ALD EM++ GV P+ ITY
Sbjct: 408 HLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITY 467
Query: 364 NILIRSLCAIGDVA--RSLRLFQKMQ 387
+IL+ L D+ R L L Q +Q
Sbjct: 468 SILLEGLKKSKDLHELRHLVLDQMVQ 493
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 134/283 (47%), Gaps = 2/283 (0%)
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G +P TY L++ L K H+ ++ +YN ++D + ++R
Sbjct: 4 HGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLER 63
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + +EM DR + ++++FN L++G C+ ++ E + + P+ T++ +ID
Sbjct: 64 AMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDD-RCSPNVITYSVLID 121
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
LC+A+R A++ L M G P+ ITY IL+ LC VA + + ++M P
Sbjct: 122 GLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVP 181
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
++ T+N+L+ CR ++ A M G P+ +Y LI L K GR +A
Sbjct: 182 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 241
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M G PD N+++ L + + +E+ +++ + GI
Sbjct: 242 ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGI 284
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G PST YN++I L N +D A ++M C P TYNILIHG+CR+ VD
Sbjct: 387 MGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDS 446
Query: 64 -ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV 99
AL ++M G P+ TY+IL++G +K + E+
Sbjct: 447 AALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHEL 483
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 155/521 (29%), Positives = 254/521 (48%), Gaps = 36/521 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YNA++ L + A +++M PD TYN L+HG C++G +DEA
Sbjct: 80 GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEA 139
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ G+ P+V TY LI+GFC A ++ E R+L+ M ++ P+ T SLV+G
Sbjct: 140 LKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNG 199
Query: 125 V--------FRCLDPHKAF-------ELLIRFMERE--------PLTQKLVC-------- 153
+ R L K F LI + RE L +K+V
Sbjct: 200 LCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIV 259
Query: 154 --NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
N L++ L+ SEA + + +GY PE T++ + L+ +NE +
Sbjct: 260 SYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGL 319
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+K G++P TY + ++ L KAGR + L + + V +V S+N VI+ CK +
Sbjct: 320 VKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRV 379
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
D A + M + +PN ++FNTLI G C+ + K +L+ G KP T+N +
Sbjct: 380 DEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNIL 439
Query: 332 IDCLCRAH---RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+D LC+A R ++A+ M+E G P+ +TY+ LI L G + + RL M+A
Sbjct: 440 VDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEA 499
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
P++YT+N+LI C ++K+++A + F +M+ G PD +Y +I AL K D+
Sbjct: 500 KGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDK 559
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
A F + G P S +++ L R +EA +++
Sbjct: 560 ALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 138/494 (27%), Positives = 237/494 (47%), Gaps = 10/494 (2%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ-CKPDRFTYNILIHGICRIGVVDEAL 65
SP ++ +L+KS I+ A+ +Q+ V C D T+NI I G+CR + +A
Sbjct: 13 SPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC--DISTFNIYISGLCRASRIGDAQ 70
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M G+ PN TY L+ G CN R+++ + E M + P+ T +L+HG
Sbjct: 71 TVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGF 130
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ +A ++ ++R + + N L+ EA IL++M +P+
Sbjct: 131 CKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDV 190
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR-YLN 244
T++ V L ++E ++ + +G P TY L+ L + R +E R L
Sbjct: 191 VTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRRLESARQLLE 247
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++ SYN +I + + A ++ + + P + T+N LI G K+
Sbjct: 248 KMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKED 307
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V++ EL L++ G +PD T+ ID LC+A R EDAL L +M E G P+ +++N
Sbjct: 308 RVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHN 367
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I LC V + L M+A SP+ +FN LI CR K +KA F ML
Sbjct: 368 AVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKR 427
Query: 425 GLRPDNFSYSALIKALIKS---GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G++P +Y+ L+ L K+ GR EA F +M + G PD T + +++ L + G+
Sbjct: 428 GVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKL 487
Query: 482 EEAHDIVKTSKERG 495
++A ++ + +G
Sbjct: 488 DDARRLLGAMEAKG 501
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 209/455 (45%), Gaps = 40/455 (8%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
PD +T IL+ + + G +++A R V+Q+ G ++ T+ I I G C A R+ + V
Sbjct: 14 PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQTV 72
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
+ M++ PN T +L+ G L N
Sbjct: 73 FDGMRKHGFWPNRITYNALLSG-----------------------------------LCN 97
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
S+A A+ +M GY P+ T++ + L+E I D +KRG P T
Sbjct: 98 GGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVT 157
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y L+ KA + E R L + + LV +V +YN +++ CK +D A + +
Sbjct: 158 YNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARML---IV 214
Query: 283 DRDIAPNLVTFNTLISGHCKDAE-VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
D+ +PN++T++TLISG C++ + R+LL ++ G KPD ++N++I L R
Sbjct: 215 DKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGV 274
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+AL ++ G P TYNILI L V + LF + + PD T+
Sbjct: 275 SEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVF 334
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I C+ ++E A M G PD S++A+I L K R DEA+ ME GC
Sbjct: 335 IDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGC 394
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+P++ + N ++ + G++++A K +RG+
Sbjct: 395 SPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGV 429
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 195/391 (49%), Gaps = 15/391 (3%)
Query: 113 PNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-----NTLLYRLSNNSMAS 167
P+ TV L+ + + KA RF+E+ L K +C N + L S
Sbjct: 14 PDAYTVGILLRSLLKSGKIEKAH----RFVEQ--LLVKGLCDISTFNIYISGLCRASRIG 67
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
+A + M G+ P T++ ++ L G +++ + + IK G P TY L+
Sbjct: 68 DAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLL 127
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
K G+ E + + K V +V +YN +I+ FCK + +D A I + M +
Sbjct: 128 HGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLV 187
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA-HRFEDALD 346
P++VT+N+L++G CK+ V + R L+V + GF P+ T++++I LCR R E A
Sbjct: 188 PDVVTYNSLVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRRLESARQ 244
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L +MV G P+ ++YN LI L V+ +L+LF + P++ T+N LI
Sbjct: 245 LLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLL 304
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ +++ +A + F ++ GL PD +Y+ I L K+GR ++A M++ GC PD
Sbjct: 305 KEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVV 364
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ N ++ L ++ R +EA ++ + +G S
Sbjct: 365 SHNAVINGLCKEKRVDEAEVLLSGMEAKGCS 395
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 129/277 (46%), Gaps = 38/277 (13%)
Query: 245 HVFKDRLV----SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
H D+LV + + +++ K +++A ++ + + ++ TFN ISG
Sbjct: 2 HTVYDKLVRIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGL 60
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ + + + + + + GF P++ T+N+++ LC R DA M++ G P+
Sbjct: 61 CRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDV 120
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TYN L+ C +G + +L++F PD+ T+NALI FC+ +K+++A++
Sbjct: 121 VTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQR 180
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDE-------------------------------- 448
M++ L PD +Y++L+ L K+GR DE
Sbjct: 181 MVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLE 240
Query: 449 -AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
A+Q M NGC PD + N ++ L ++ EA
Sbjct: 241 SARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEA 277
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/487 (29%), Positives = 248/487 (50%), Gaps = 5/487 (1%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN ++++L + +D + +M D+ P+ +TYN +++G C++G V+EA + V +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG--VFRCLD 130
G P+ +TYT LI G+C K + F+V + M + NE L+HG V R +D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A +L ++ + + L+ L + SEA ++++M ++G P T+
Sbjct: 306 --EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTV 363
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L + L + +L +++G+ P TY L+ K G + + +
Sbjct: 364 LIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRN 423
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
L N +YN +I +CK N+ +A + +M +R + P++VT+N+LI G C+
Sbjct: 424 LRPNTRTYNELIKGYCKRNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
LL ++ + G PD +T+ SMID LC++ R E+A D + + V PN + Y LI
Sbjct: 483 RLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGY 542
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C G V + + +KM + P+ TFNALI C K+++A M+ + L+P
Sbjct: 543 CKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTV 602
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+ + LI L+K G FD A + F M +G PD++T ++T ++GR ++A D+V
Sbjct: 603 STDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAK 662
Query: 491 SKERGIS 497
KE G+S
Sbjct: 663 MKENGVS 669
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 229/466 (49%), Gaps = 7/466 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++I + +D A+ F++M + C+ + Y LIHG+C +DEA
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEA 307
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +M+ P V TYT+LI C ++R +E +++ M+E+ + PN T L+
Sbjct: 308 MDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDS 367
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KA ELL + +E+ + + N L+ M +A ++ M R P
Sbjct: 368 LCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPN 427
Query: 185 SSTFDYTVTCLVTGL---DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+ T++ L+ G ++++ G+L+ ++R V P TY L++ ++G R
Sbjct: 428 TRTYNE----LIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L+ + LV + +Y +ID CK ++ A ++ + +D+ PN+V + LI G+C
Sbjct: 484 LLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYC 543
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K +V++ +L +L P+ TFN++I LC + ++A +MV+ + P
Sbjct: 544 KAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVS 603
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
T ILI L GD + R FQ+M + PD +T+ IQ++CR +++ AE M
Sbjct: 604 TDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKM 663
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
G+ PD F+YS+LIK GR + A M GC P +T
Sbjct: 664 KENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHT 709
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/500 (26%), Positives = 222/500 (44%), Gaps = 20/500 (4%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ R Y +I AL S A ++M KP+ TY +LI +C +++A L
Sbjct: 321 PTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKAREL 380
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ QM G PNV TY LI+G+C + + V+E+M+ RN+ PN T L+ G +
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK 440
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ HKA +L + +ER+ L + N+L+ + A +L M DRG +P+ T
Sbjct: 441 -RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWT 499
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + L + E C + D+ ++ V P Y L++ KAG+ E L +
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKML 559
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ N ++N +I C + AT + +M D+ P + T LI KD +
Sbjct: 560 SKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFD 619
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+L G KPD T+ + I CR R +DA D +++M E GV P+ TY+ LI
Sbjct: 620 HAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLI 679
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM--NKIEKAEKA-------- 417
+ +G + + ++M P +TF +LI+ M K++ E
Sbjct: 680 KGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMM 739
Query: 418 --------FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN-GCNPDSYTS 468
M+ G+ P+ SY L+ + + G A++ F M+Q G +P
Sbjct: 740 EFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVF 799
Query: 469 NLILETLVQQGRFEEAHDIV 488
N +L + + EA +V
Sbjct: 800 NALLSCCCKLEKHNEAAKVV 819
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 143/550 (26%), Positives = 242/550 (44%), Gaps = 55/550 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ Y +ID+L ++ A QM P+ TYN LI+G C+ G++++A
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +V+ ME PN TY LI G+C + V + VL M ER V P+ T SL+ G
Sbjct: 413 LDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDG 471
Query: 125 VFRCLDPHKAFELLIRFMER----EPLT--------------------------QKLVCN 154
R + A+ LL +R +P T + ++ N
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPN 531
Query: 155 TLLYR-----LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
++Y +EA +L KM + LP S TF+ + L T L E + +
Sbjct: 532 VVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEE 591
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+K ++P ST +L+ L K G R + + ++Y I +C+
Sbjct: 592 KMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+ A ++ +M++ ++P+L T+++LI G+ + +L + + G +P + TF
Sbjct: 652 RLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFL 711
Query: 330 SMIDCLCRAH------------------RFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
S+I L F+ ++ L +MVE GV PN +Y L+ +C
Sbjct: 712 SLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGIC 771
Query: 372 AIGDVARSLRLFQKMQA-DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
IG++ + ++F MQ + ISP FNAL+ C++ K +A K M+ +G P
Sbjct: 772 EIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQL 831
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
S LI L K G + F ++ Q G D +I++ + +QG E +++
Sbjct: 832 ESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNV 891
Query: 491 SKERGISFKS 500
++ G +F S
Sbjct: 892 MEKNGCTFSS 901
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 200/426 (46%), Gaps = 21/426 (4%)
Query: 76 YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAF 135
Y +VY+Y L+ N V VF++ +M + C + A V + R ++ ++F
Sbjct: 119 YKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKS--CDSVADTL-FVLDLCRKMNKDESF 175
Query: 136 ELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
EL + + + C NTLL L+ + E + +M + P T++ V
Sbjct: 176 ELKYKLI--------IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNG 227
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS- 253
++ E + ++ G+ P F TY L+ Y +D++ VFK+ +
Sbjct: 228 YCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMG-YCQRKDLDS---AFKVFKEMPLKG 283
Query: 254 ---NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
N +Y +I C +D A ++ +M+D D P + T+ LI C +
Sbjct: 284 CRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEAL 343
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
L+ + E G KP+ T+ +ID LC + E A + L +M+E G+ PN ITYN LI
Sbjct: 344 NLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C G + +L + + M++ + P+ T+N LI+ +C+ N + KA ML + PD
Sbjct: 404 CKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDV 462
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+Y++LI +SG FD A + M G PD +T ++++L + R EEA D+ +
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 491 SKERGI 496
+++ +
Sbjct: 523 LEQKDV 528
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/489 (23%), Positives = 201/489 (41%), Gaps = 58/489 (11%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P YN++ID +S + D AY M+ PD +TY +I +C+ V+EA
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEAC 517
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L +E PNV YT LIDG+C A +V E +LE M +N PN T +L+HG+
Sbjct: 518 DLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Query: 126 FRCLDPH-KAFELLIRFMEREPLTQKLVCNTLL-YRLSNNSMASEAAAILRKMGDRGYLP 183
C D K LL M + L + +T+L +RL + A ++M G P
Sbjct: 578 --CTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKP 635
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ T+ + L + ++ + GV P TY L++ GR L
Sbjct: 636 DAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVL 695
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKV----------------NMM--DRATEICREMRDRD 285
+ + +++ +I ++ NMM D E+ +M +
Sbjct: 696 KRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHG 755
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELL-VMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
+ PN ++ L+ G C+ + ++ M + G P + FN+++ C C+ + +A
Sbjct: 756 VTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEA 815
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
+ +M+ G P + ILI RL++K + +R
Sbjct: 816 AKVVDDMICVGHLPQLESCKILI------------CRLYKKGEKER-------------- 849
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
F ++L G D ++ +I + K G + + F ME+NGC
Sbjct: 850 ---------GTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFS 900
Query: 465 SYTSNLILE 473
S T +L++E
Sbjct: 901 SQTYSLLIE 909
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 129/315 (40%), Gaps = 19/315 (6%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ + P+ +I L+K D AY +FQQM KPD TY I CR G + +
Sbjct: 596 IDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQD 655
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV- 122
A +V +M+ G +P+++TY+ LI G+ + R F VL+ M + P++ T SL+
Sbjct: 656 AEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIK 715
Query: 123 ------HGVFRCLDPHK-----------AFELLIRFMEREPLTQKLVCNTLLYRLSNNSM 165
+G + +P ELL + +E L+ +
Sbjct: 716 HLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGN 775
Query: 166 ASEAAAILRKMGDR-GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYL 224
A + M + G P F+ ++C NE ++D I G P+ +
Sbjct: 776 LRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCK 835
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
+L+ LYK G G ++ + + ++ ++ID K +++ E+ M
Sbjct: 836 ILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKN 895
Query: 285 DIAPNLVTFNTLISG 299
+ T++ LI G
Sbjct: 896 GCTFSSQTYSLLIEG 910
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/489 (28%), Positives = 242/489 (49%), Gaps = 6/489 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++PST Y ++I L +NS D A F M+ C P TYN++I C+ G+++EA
Sbjct: 40 GVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEA 99
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+K+M G+ P+V TY ++DG C + RV E + M+ PN + +++ G
Sbjct: 100 CDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILG 159
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A ++ R+ L+ L+ +EA + R+M D G P
Sbjct: 160 LCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPS 219
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + + L+E + + +G +P T+ +L++A K G+ E R L
Sbjct: 220 AVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLK 279
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D V +V +Y+ +I C + +D A + +M R P +VT NTLI G CK
Sbjct: 280 RMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAG 339
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + RE+L ++ G PD T+N+++ CRA + E A + LS+MV G+ PN +TY
Sbjct: 340 RIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYT 399
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ LC + + +F +M++ +P+++T+ ALI FC +++ K F M+
Sbjct: 400 ALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCA 459
Query: 425 GLRPDNFSYSALIKALIKSGRFDEA----KQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
G+ PD+ Y L L KSGR A ++ S+ + Y ++ L+ G+
Sbjct: 460 GISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVY--RFAVDGLLDAGK 517
Query: 481 FEEAHDIVK 489
E A V+
Sbjct: 518 MEMALGFVR 526
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 207/440 (47%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
PD ++Y ILI G+ + G +++A L +++ G P+ YT LI G C A + +
Sbjct: 8 PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
M R P+ T ++ + +A +L+ + +E + + NT++ L
Sbjct: 68 FADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+ EA + +M G P + + + L +++ C + R + P +
Sbjct: 128 SGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWS 187
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y +L++ L KAG+ E + + + + +YN+VI C +D A E+ + MR
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+ P+ TFN LI HCK ++ + LL + + G PD T++++I LC R +
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
DA L +MV+ P +T N LI LC G + + + M + SPD+ T+N L+
Sbjct: 308 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 367
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
CR + E+A + M+ GL P+ +Y+AL+ L K+ R EA F M+ +GC
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 427
Query: 463 PDSYTSNLILETLVQQGRFE 482
P+ +T ++ G+ +
Sbjct: 428 PNLFTYTALILGFCSAGQVD 447
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 204/454 (44%), Gaps = 41/454 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG +P+ R +N +I L + + ID A F +M PD ++Y ILI G+ + G ++E
Sbjct: 144 LGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNE 203
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +L ++M G P+ TY ++I G C A + E + + M+ + P+ T L+
Sbjct: 204 AYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILI- 262
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
D H EA +L++M D G++P
Sbjct: 263 ------DAH----------------------------CKRGKMDEAFRLLKRMTDDGHVP 288
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ ++ L + +++ +L+ +KR KP T L+ L KAGR E L
Sbjct: 289 DVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVL 348
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +V +YN ++ C+ +RA E+ +M R +APN+VT+ L+SG CK
Sbjct: 349 DAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKA 408
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + + + G P+ FT+ ++I C A + + L EMV G+ P+ + Y
Sbjct: 409 NRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVY 468
Query: 364 NILIRSLCAIGDVARSLRLF----QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
L LC G AR+L + + ++++ ++Y F + K+E A
Sbjct: 469 GTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFA--VDGLLDAGKMEMALGFVR 526
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
M+ G P ++L+ L KSG+ EA+
Sbjct: 527 DMVRGGQLPAPERCASLVAGLCKSGQGGEARAVL 560
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 188/392 (47%)
Query: 106 MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSM 165
M ERNV P+ + L+ G+ + + A +L + + + +L++ L +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 166 ASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLL 225
+A + M RG P T++ + L E C ++ I+ G P TY
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 226 LMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
+M+ L K+GR E N + + N S+N +I C+ + +D+A ++ EM RD
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
I P+ ++ LI G K ++++ +L +L+ G P T+N +I +C A+ ++AL
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+ M G P+ T+NILI + C G + + RL ++M D PD+ T++ LI
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
C + +++ A M+ +P + + LI L K+GR EA++ +M +G +PD
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T N ++ + G+ E A +++ RG++
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLA 392
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 144/496 (29%), Positives = 241/496 (48%), Gaps = 6/496 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ YN +I+ L KSN + F+++ PD TYN LI +C+ G ++EA
Sbjct: 76 GVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEA 135
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER--NVCPNEATVRSLV 122
RL M G PNV TY++LI+G C R+ E +++ M + +V PN T S +
Sbjct: 136 RRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFL 195
Query: 123 HGVFRCLDPHKAFELL--IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
G+ + +A EL+ +R + +TL+ L EA M G
Sbjct: 196 DGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGG 253
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
Y+P T++ V L + ++++ + +GV P TY +L++A KA R E
Sbjct: 254 YVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 313
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L+ + NV ++N +ID CK + A +I ++ +R + P+ VTFN LI+G
Sbjct: 314 ELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGA 373
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK + L ++ +PD TF ++ID LC+A + E A D L M GVPPN
Sbjct: 374 CKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNV 433
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TYN+L+ LC G + ++M + P+ T+ +L+ + CR ++ + A +
Sbjct: 434 VTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSK 493
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+ + G PD +Y+ L+ L KSG+ ++A M G PDS+T L + G
Sbjct: 494 LKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGN 553
Query: 481 FEEAHDIVKTSKERGI 496
++++ +G+
Sbjct: 554 LAGTMELLRVVLAKGM 569
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 231/473 (48%), Gaps = 6/473 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN +ID+L K+ ++ A MS C P+ TY++LI+G+C++G +DEA
Sbjct: 111 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEA 170
Query: 65 LRLVKQM--EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN--VCPNEATVRS 120
L+++M + PN+ TY +DG C AE ++ +++ + V P+ T +
Sbjct: 171 RELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFST 230
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G+ +C +A + + + N L+ L A A++ M D+G
Sbjct: 231 LIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKG 288
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T+ V ++E +L RG P T+ +++ L K+ R E
Sbjct: 289 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAF 348
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ V+ LV + ++N++I CK ++A+ + EM +++ P+++TF LI G
Sbjct: 349 QIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGL 408
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK +V R++L ++ G P+ T+N ++ LC++ R E+ + L EMV G P +
Sbjct: 409 CKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPES 468
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TY L+ +LC +L+L K+++ PD T+N L+ + K E+A
Sbjct: 469 MTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEE 528
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
M+ G +PD+F+++A L +SG + + G PD+ T + IL+
Sbjct: 529 MVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 165/359 (45%), Gaps = 2/359 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L +SP T ++ +ID L K D A M P+ TYN L++G+C+ ++
Sbjct: 219 LRVSPDTVTFSTLIDGLCKCGQTDEAC--NDDMIAGGYVPNVVTYNALVNGLCKADKMER 276
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +++ M G P+V TY++L+D FC A RV E +L M R PN T S++
Sbjct: 277 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 336
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +AF++ ++ R + K+ N L+ +A+A+ +M + P
Sbjct: 337 GLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQP 396
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF + L + ILD GV P TY +L+ L K+GR E +L
Sbjct: 397 DVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFL 456
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ V +Y ++ C+ + D A ++ +++ P+ VT+N L+ G K
Sbjct: 457 EEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKS 516
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + +L ++ G +PD FTF + L R+ ++ L ++ G+ P+ T
Sbjct: 517 GKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATT 575
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ YN ++ L KS I+ ++M C P+ TY L++ +CR D+
Sbjct: 427 LGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDD 486
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL+LV +++ G+ P+ TY IL+DG + + + VLE M + P+ T +
Sbjct: 487 ALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFG 546
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL 157
G+ R + ELL + + L C+++L
Sbjct: 547 GLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 144/502 (28%), Positives = 233/502 (46%), Gaps = 46/502 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ YN +I+ L KSN + F+++ PD TYN LI +C+ G ++EA
Sbjct: 32 GVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEA 91
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER--NVCPNEATVRSLV 122
RL M G PNV TY++LI+G C R+ E +++ M + +V PN T S +
Sbjct: 92 RRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFL 151
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G L SM +EA ++R + D G L
Sbjct: 152 DG-----------------------------------LCKQSMTAEACELMRSLRD-GSL 175
Query: 183 ---PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
P++ TF + L ++E C + D I G P TY L+ L KA +
Sbjct: 176 RVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERA 235
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL-----VTFN 294
+ + + +V +Y++++D FCK + +D A E+ M R PN+ VTFN
Sbjct: 236 HAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFN 295
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
LI+G CK + L ++ +PD TF ++ID LC+A + E A D L M
Sbjct: 296 ILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 355
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
GVPPN +TYN L+ LC G + + + ++M + PD T+ +L+ + CR ++ + A
Sbjct: 356 GVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDA 415
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
+ + + G PD +Y+ L+ L KSG+ ++A M G PDS+T
Sbjct: 416 LQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSG 475
Query: 475 LVQQGRFEEAHDIVKTSKERGI 496
L + G ++++ +G+
Sbjct: 476 LHRSGNLAGTMELLRVVLAKGM 497
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 218/462 (47%), Gaps = 9/462 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN +ID+L K+ ++ A MS C P+ TY++LI+G+C++G +DEA
Sbjct: 67 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEA 126
Query: 65 LRLVKQM--EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN--VCPNEATVRS 120
L+++M + PN+ TY +DG C AE ++ +++ + V P+ T +
Sbjct: 127 RELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFST 186
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G+ +C +A + + + + N L+ L A A++ M D+G
Sbjct: 187 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 246
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF-----STYLLLMEALYKAGR 235
P+ T+ V ++E +L RG P T+ +L+ KAG
Sbjct: 247 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGN 306
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
+ + L +V ++ +ID CK ++ A +I M + + PN+VT+N
Sbjct: 307 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNA 366
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
L+ G CK + + + L ++ G PD T+ S++ LCRA R +DAL +SE+ +G
Sbjct: 367 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 426
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
P+T+TYNIL+ L G +++ + ++M PD +TF A R +
Sbjct: 427 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTM 486
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+ +L G+ PD + S+++ + +SG+ D+ K E
Sbjct: 487 ELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 135/248 (54%), Gaps = 5/248 (2%)
Query: 255 VNSYNMVIDCFCKVNMMDRATEICR-EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
V YN+V+ C+ RA EI R EM +AP +VT+NT+I+G CK ++ EL
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
L+E G PD T+N++ID LC+A E+A +M G PN +TY++LI LC +
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 374 GDVARSLRLFQKM--QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR--PD 429
G + + L Q+M ++ + P+I T+N+ + C+ + +A + S+ LR PD
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
++S LI L K G+ DEA F M G P+ T N ++ L + + E AH +++
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240
Query: 490 TSKERGIS 497
+ ++G++
Sbjct: 241 SMVDKGVT 248
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 157/345 (45%), Gaps = 5/345 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L +SP T ++ +ID L K ID A F M P+ TYN L++G+C+ ++
Sbjct: 175 LRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMER 234
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPN-----EATV 118
A +++ M G P+V TY++L+D FC A RV E +L M R PN + T
Sbjct: 235 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTF 294
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
L+ G + + +A L + + + L+ L A IL MG+
Sbjct: 295 NILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 354
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P T++ V L + E C L+ + G P TY L+ AL +A R +
Sbjct: 355 LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDD 414
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ ++ + + +YN+++D K ++A + EM + P+ TF S
Sbjct: 415 ALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFS 474
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
G + + T ELL ++L G PD T +S++D +CR+ + +D
Sbjct: 475 GLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDD 519
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ YNA++ L KS I+ A ++M C PD TY L++ +CR D+
Sbjct: 355 LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDD 414
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL+LV +++ G+ P+ TY IL+DG + + + VLE M + P+ T +
Sbjct: 415 ALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFS 474
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
G+ R + ELL + + L C+++L + + + A++++
Sbjct: 475 GLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 142/523 (27%), Positives = 262/523 (50%), Gaps = 35/523 (6%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ A+ K DL ++M + D ++YNILI+ CR + AL +
Sbjct: 78 PSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P++ T + L++G+C++KR+++ +++ M E P+ T +L+HG+F
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFL 197
Query: 128 CLDPHKAFEL----------------------------------LIRFMEREPLTQKLVC 153
+A L L++ ME+ + +V
Sbjct: 198 HNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 154 -NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
NT++ L +A A+ KM +G P+ T++ ++CL ++ +L I
Sbjct: 258 YNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMI 317
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+R + P T+ L++A K G+ VE ++ + + K + ++ +Y+ +I+ FC + +D
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + M +D PN+VT+NTLI G CK V + EL + + G + T+N++I
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
L +A + A +MV GVPP+ ITY+IL+ LC G + ++L +F+ +Q ++
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PDIYT+N +I+ C+ K+E F S+ G++P+ Y+ +I + G +EA
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
F M+++G PDS N ++ ++ G + +++K + G
Sbjct: 558 FREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCG 600
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 180/371 (48%), Gaps = 10/371 (2%)
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLS-------NNSMASEAAAILRKMGDRGYLPES 185
K F+L+I ER Q L + LY + S A A+L KM GY P+
Sbjct: 94 KKFDLVISLGER---MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDI 150
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T + +++ ++D ++ G KP T+ L+ L+ + E ++
Sbjct: 151 VTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQ 210
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + ++ +Y V++ CK +D A + ++M I ++V +NT+I G CK
Sbjct: 211 MVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 270
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ L + G +PD FT+NS+I CLC R+ DA LS M+E + PN +T++
Sbjct: 271 IDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSA 330
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI + G + + +L+ +M I PDI+T+++LI FC +++++A+ F M++
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
P+ +Y+ LIK K+ R +E + F M Q G ++ T N +++ L Q G + A
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 486 DIVKTSKERGI 496
I K G+
Sbjct: 451 KIFKKMVSDGV 461
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 160/379 (42%), Gaps = 35/379 (9%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I +YN +ID L K ID A+ F +M +PD FTYN LI +C G +A
Sbjct: 251 IEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDAS 310
Query: 66 RLVKQM---------------------EGL--------------GYAPNVYTYTILIDGF 90
RL+ M EG P+++TY+ LI+GF
Sbjct: 311 RLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 91 CNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQK 150
C R+ E + E+M ++ PN T +L+ G + + EL +R +
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
+ NTL+ L A I +KM G P+ T+ + L L + + +
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
K ++P TY +++E + KAG+ +G + + NV Y +I FC+ +
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 550
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+ A + REM++ P+ +NTLI +D + + EL+ + CGF D T +
Sbjct: 551 KEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISM 610
Query: 331 MIDCLCRAHRFEDALDCLS 349
+I+ L + L+ LS
Sbjct: 611 VINMLHDGRLEKSYLEMLS 629
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 138/289 (47%), Gaps = 35/289 (12%)
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + R + ++ +N ++ K+ D + M++ I+ +L ++N LI+ C+
Sbjct: 68 FGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCR 127
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+++ +L +++ G++PD T +S+++ C + R DA+ + +MVE G P+T+T
Sbjct: 128 RSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVT 187
Query: 363 YNILIR-----------------------------------SLCAIGDVARSLRLFQKMQ 387
+N LI LC GD+ +L L +KM+
Sbjct: 188 FNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKME 247
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+I D+ +N +I C+ I+ A F M T G+RPD F+Y++LI L GR+
Sbjct: 248 KGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWS 307
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+A + +M + NP+ T + +++ V++G+ EA + +R I
Sbjct: 308 DASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ +DA+ EMV+ P+ + +N L+ ++ + + L ++MQ RIS D+Y++N
Sbjct: 60 KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI FCR +++ A M+ LG PD + S+L+ S R +A M +
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G PD+ T N ++ L + EA +V +RG
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRG 215
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P+ +Y +I + + A F++M D PD YN LI R G
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGD 585
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID 88
+ L+K+M G+ + T +++I+
Sbjct: 586 KAASAELIKEMRSCGFVGDASTISMVIN 613
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 148/493 (30%), Positives = 251/493 (50%), Gaps = 14/493 (2%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP+ Y +I L + ID AY +M C PD YN LI G+C++G +D A
Sbjct: 89 SPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARN 148
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++K M P+V TYT LI G C + E +++E MKE + P+ +L++G+
Sbjct: 149 VLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLC 208
Query: 127 RCLDPHKAFELLIRFME--REPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +LL +E REP T NT++ L + EA IL KM ++ P+
Sbjct: 209 KQNQLEEVSKLLEEMVEAGREPDTFSY--NTVVACLCESGKYEEAGKILEKMIEKKCGPD 266
Query: 185 SSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
T++ + C V+ +D E +L+ + R P TY L+ +A R + R
Sbjct: 267 VVTYNSLMDGFCKVSKMDEAER--LLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRV 324
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ +FK + ++ +YN ++D CK ++ A E+ M ++D AP++VT++ L++G CK
Sbjct: 325 MEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCK 384
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+V R LL M+LE G +P+ TFN+MID C+A + ++ L M E P+ +T
Sbjct: 385 LGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVT 444
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y+ LI C ++ R+ ISPD +++++++ C K+E+A++ M
Sbjct: 445 YSTLIDGYC------KANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMT 498
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G P + Y+ +I L R DEA + M + GC P+ YT ++++ L + R E
Sbjct: 499 KQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVE 558
Query: 483 EAHDIVKTSKERG 495
+A +++ E+G
Sbjct: 559 DAINVLDVMLEKG 571
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/517 (26%), Positives = 249/517 (48%), Gaps = 31/517 (5%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS Y A+I ++ + + +M + PD T+N ++ C+IG +D AL
Sbjct: 22 PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSH 81
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ + +P +TY ILI G C +R+ E +++L+ M +++ P+ A L+ G+ +
Sbjct: 82 FRGK--MWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCK 139
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
A +L +ER + + +L+ + EA ++ KM + G P++
Sbjct: 140 MGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVA 199
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + L L E +L+ ++ G +P +Y ++ L ++G+ E + L +
Sbjct: 200 YNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMI 259
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ + +V +YN ++D FCKV+ MD A + +M R AP ++T+ TLI G + +
Sbjct: 260 EKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLA 319
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
++ + + G PD T+N ++D LC+A + E+A + L MVE P+ +TY+IL+
Sbjct: 320 DAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILV 379
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF--------- 418
LC +G V + L + M P++ TFN +I FC+ K+++ K
Sbjct: 380 NGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCT 439
Query: 419 -----FSML---------------TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+S L LG+ PD SYS++++ L +G+ +EA++ M +
Sbjct: 440 PDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTK 499
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
GC P S LI+ L R +EA +++ ERG
Sbjct: 500 QGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERG 536
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/475 (28%), Positives = 239/475 (50%), Gaps = 8/475 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P T YNA+++ L K N ++ ++M +PD F+YN ++ +C G +EA
Sbjct: 192 GLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEA 251
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++++M P+V TY L+DGFC ++ E R+LE M R P T +L+ G
Sbjct: 252 GKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGG 311
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
R A+ ++ M + ++ LV N LL L EA +L M ++ P
Sbjct: 312 FSRADRLADAYRVM-EDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAP 370
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ V L +++ +L+ ++RG +P T+ +++ KAG+ EG + L
Sbjct: 371 DVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVL 430
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +V +Y+ +ID +CK N M A I I+P+ ++++++ G C
Sbjct: 431 ELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAI------LGISPDKASYSSMLEGLCST 484
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V + +E++ ++ + G P + +I LC R ++AL L M E G PN TY
Sbjct: 485 GKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTY 544
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+ILI LC V ++ + M PD+ T+ +LI FC++NK++ A + F +M
Sbjct: 545 SILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRD 604
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
G PD +Y+ LI +SG ++A + M + GCNPD+ T ++ +L +
Sbjct: 605 SGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 128/260 (49%), Gaps = 2/260 (0%)
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
R +EG + F D + ++Y +I F + EI EM R +P+++T N
Sbjct: 4 RPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHN 63
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
T++ +C+ ++ + + C P FT+ +I LC+ R ++A L EM++
Sbjct: 64 TILKAYCQIGDLDRALSHFRGKMWC--SPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQK 121
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
P+ YN LI LC +G + + + + M PD+ T+ +LI C+ N +++A
Sbjct: 122 DCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEA 181
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
K M GL PD +Y+AL+ L K + +E + M + G PD+++ N ++
Sbjct: 182 RKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVAC 241
Query: 475 LVQQGRFEEAHDIVKTSKER 494
L + G++EEA I++ E+
Sbjct: 242 LCESGKYEEAGKILEKMIEK 261
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 97/187 (51%)
Query: 2 SFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
+ LGISP Y+++++ L + ++ A M+ C P Y ++I G+C +
Sbjct: 463 AILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERG 522
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
DEAL++++ M G PN+YTY+ILI+G C KRV + VL++M E+ P+ AT SL
Sbjct: 523 DEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSL 582
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ G + A++ + KL N L+ + +A +++ M ++G
Sbjct: 583 IDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGC 642
Query: 182 LPESSTF 188
P+++T+
Sbjct: 643 NPDAATY 649
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 138/489 (28%), Positives = 243/489 (49%), Gaps = 6/489 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++PST Y ++I L +NS D A F M+ C P TYN++I C+ G+++EA
Sbjct: 40 GVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEA 99
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+K+M G+ P+V TY ++DG C + RV E + M+ PN + +++ G
Sbjct: 100 CDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILG 159
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A ++ ++ L+ L+ +EA + ++M D G P
Sbjct: 160 LCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPS 219
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + + L+E + + +G +P T+ +L++A K G+ E R L
Sbjct: 220 AVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLK 279
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D V +V +Y+ +I C + +D A + +M R P +VT NTLI G CK
Sbjct: 280 RMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAG 339
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + RE+L ++ G PD T+N+++ CRA + E A + LS+MV G+ PN +TY
Sbjct: 340 RIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYT 399
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ LC + + +F +M++ +P+++T+ ALI FC +++ K F M+
Sbjct: 400 ALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCA 459
Query: 425 GLRPDNFSYSALIKALIKSGRFDEA----KQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
G+ PD+ Y L L KSGR A ++ S+ + Y ++ L++ G+
Sbjct: 460 GISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVY--RFAVDGLLEAGK 517
Query: 481 FEEAHDIVK 489
E A V+
Sbjct: 518 MEMALGFVR 526
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 208/440 (47%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
PD ++Y ILI G+ + G +++A L +++ G P+ YT LI G C A + +
Sbjct: 8 PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
M R P+ T ++ + +A +L+ + +E + + NT++ L
Sbjct: 68 FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+S EA + +M G P + + + L +++ C + + + P +
Sbjct: 128 SSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWS 187
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y +L++ L KAG+ E + + + + +YN+VI C +D A E+ + MR
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+ P+ TFN LI HCK ++ + LL + + G PD T++++I LC R +
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
DA L +MV+ P +T N LI LC G + + + M + SPD+ T+N L+
Sbjct: 308 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 367
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
CR + E+A + M+ GL P+ +Y+AL+ L K+ R EA F M+ +GC
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 427
Query: 463 PDSYTSNLILETLVQQGRFE 482
P+ +T ++ G+ +
Sbjct: 428 PNLFTYTALILGFCSAGQVD 447
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 204/454 (44%), Gaps = 41/454 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG +P+ R +N +I L + + ID A F +M PD ++Y ILI G+ + G ++E
Sbjct: 144 LGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNE 203
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +L ++M G P+ TY ++I G C A + E + + M+ + P+ T L+
Sbjct: 204 AYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILI- 262
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
D H EA +L++M D G++P
Sbjct: 263 ------DAH----------------------------CKRGKLDEAFRLLKRMTDDGHVP 288
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ ++ L + +++ +L+ +KR KP T L+ L KAGR E L
Sbjct: 289 DVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVL 348
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +V +YN ++ C+ +RA E+ +M R +APN+VT+ L+SG CK
Sbjct: 349 DAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKA 408
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + + + G P+ FT+ ++I C A + + L EMV G+ P+ + Y
Sbjct: 409 NRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVY 468
Query: 364 NILIRSLCAIGDVARSLRLF----QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
L LC G AR+L + + ++++ ++Y F + K+E A
Sbjct: 469 GTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRF--AVDGLLEAGKMEMALGFVR 526
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
M+ G P ++L+ L KSG+ EA+
Sbjct: 527 DMVRGGQLPAPERCASLVAGLCKSGQGGEARAVL 560
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 186/392 (47%)
Query: 106 MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSM 165
M ERNV P+ + L+ G+ + + A L + + + +L++ L +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 166 ASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLL 225
+A + M RG P T++ + L E C ++ I+ G P TY
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 226 LMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
+M+ L K+ R E N + + N S+N +I C+ + +D+A ++ EM +D
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
I P+ ++ LI G K ++++ +L +L+ G P T+N +I +C A+ ++AL
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+ M G P+ T+NILI + C G + + RL ++M D PD+ T++ LI
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
C + +++ A M+ +P + + LI L K+GR EA++ +M +G +PD
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T N ++ + G+ E A +++ RG++
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLA 392
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 145/523 (27%), Positives = 260/523 (49%), Gaps = 35/523 (6%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ A+ K N DL ++M + D ++YNILI+ CR + AL +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P++ T + L++G+C+ KR++E +++ M PN T +L+HG+F
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 128 CLDPHKAFELLIRFMER--EP--LTQKLVCNTLLYR------------------------ 159
+A L+ R + R +P T V N L R
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 160 -------LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
L N ++A + +M ++G P T++ + CL ++ +L I
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+R + P T+ L++A K G+ VE ++ + + K + ++ +Y+ +I+ FC + +D
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + M +D PN+VT+NTLI G CK V + EL + + G + T+N++I
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
L +A + A +MV GVPP+ ITY+IL+ LC G + ++L +F+ +Q ++
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PDIYT+N +I+ C+ K+E F S+ G++P+ Y+ +I + G +EA
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
F M+++G P+S T N ++ ++ G + +++K + G
Sbjct: 558 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 182/407 (44%), Gaps = 3/407 (0%)
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATV---RSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
AKR A++ + + R V + A+ L V L A +L ++ PL
Sbjct: 20 AKRFAQLRKASPLFSLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPS 79
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ N LL ++ + ++ +M + + +++ + C L +L
Sbjct: 80 IVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLG 139
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+K G +P T L+ R E ++ +F N ++N +I N
Sbjct: 140 KMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHN 199
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
A + M R P+L T+ T+++G CK ++ LL + + + D +
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++ID LC DAL+ +EM G+ PN +TYN LIR LC G + + RL M
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+I+P++ TF+ALI +F + K+ +AEK + M+ + PD F+YS+LI R DEA
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
K F M C P+ T N +++ + R EE ++ + +RG+
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 160/328 (48%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A A+L KM GY P+ T + G ++E ++D +P T+ L+
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 193
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
L+ + E ++ + ++ +Y V++ CK +D A + ++M I
Sbjct: 194 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
++V + T+I C V+ L + G +P+ T+NS+I CLC R+ DA L
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
S+M+E + PN +T++ LI + G + + +L+ +M I PDI+T+++LI FC
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+++++A+ F M++ P+ +Y+ LIK K+ R +E + F M Q G ++ T
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGI 496
N +++ L Q G + A I K G+
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 151/344 (43%), Gaps = 35/344 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P+ ++A+IDA VK + A + +M PD FTY+ LI+G C +DEA
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ + M PNV TY LI GFC AKRV E + M +R + N T +L+ G+
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
F+ D C+ A I +KM G P+
Sbjct: 441 FQAGD----------------------CDM-------------AQKIFKKMVSDGVPPDI 465
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + L L + + + K ++P TY +++E + KAG+ +G
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + NV Y +I FC+ + + A + REM++ PN T+NTLI +D +
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+ EL+ + CGF D T + +I+ L + L+ LS
Sbjct: 586 KAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEMLS 629
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 42/88 (47%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P+ +Y +I + + A F++M D P+ TYN LI R G
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID 88
+ L+K+M G+ + T +++I+
Sbjct: 586 KAASAELIKEMRSCGFVGDASTISMVIN 613
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 145/523 (27%), Positives = 260/523 (49%), Gaps = 35/523 (6%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ A+ K N DL ++M + D ++YNILI+ CR + AL +
Sbjct: 62 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 121
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P++ T + L++G+C+ KR++E +++ M PN T +L+HG+F
Sbjct: 122 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 181
Query: 128 CLDPHKAFELLIRFMER--EP--LTQKLVCNTLLYR------------------------ 159
+A L+ R + R +P T V N L R
Sbjct: 182 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 241
Query: 160 -------LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
L N ++A + +M ++G P T++ + CL ++ +L I
Sbjct: 242 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 301
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+R + P T+ L++A K G+ VE ++ + + K + ++ +Y+ +I+ FC + +D
Sbjct: 302 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 361
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + M +D PN+VT+NTLI G CK V + EL + + G + T+N++I
Sbjct: 362 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 421
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
L +A + A +MV GVPP+ ITY+IL+ LC G + ++L +F+ +Q ++
Sbjct: 422 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 481
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PDIYT+N +I+ C+ K+E F S+ G++P+ Y+ +I + G +EA
Sbjct: 482 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 541
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
F M+++G P+S T N ++ ++ G + +++K + G
Sbjct: 542 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 584
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 182/407 (44%), Gaps = 3/407 (0%)
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATV---RSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
AKR A++ + + R V + A+ L V L A +L ++ PL
Sbjct: 4 AKRFAQLRKASPLFSLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPS 63
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ N LL ++ + ++ +M + + +++ + C L +L
Sbjct: 64 IVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLG 123
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+K G +P T L+ R E ++ +F N ++N +I N
Sbjct: 124 KMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHN 183
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
A + M R P+L T+ T+++G CK ++ LL + + + D +
Sbjct: 184 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 243
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++ID LC DAL+ +EM G+ PN +TYN LIR LC G + + RL M
Sbjct: 244 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 303
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+I+P++ TF+ALI +F + K+ +AEK + M+ + PD F+YS+LI R DEA
Sbjct: 304 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 363
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
K F M C P+ T N +++ + R EE ++ + +RG+
Sbjct: 364 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 410
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 160/328 (48%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A A+L KM GY P+ T + G ++E ++D +P T+ L+
Sbjct: 118 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 177
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
L+ + E ++ + ++ +Y V++ CK +D A + ++M I
Sbjct: 178 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 237
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
++V + T+I C V+ L + G +P+ T+NS+I CLC R+ DA L
Sbjct: 238 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 297
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
S+M+E + PN +T++ LI + G + + +L+ +M I PDI+T+++LI FC
Sbjct: 298 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 357
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+++++A+ F M++ P+ +Y+ LIK K+ R +E + F M Q G ++ T
Sbjct: 358 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 417
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGI 496
N +++ L Q G + A I K G+
Sbjct: 418 NTLIQGLFQAGDCDMAQKIFKKMVSDGV 445
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 151/344 (43%), Gaps = 35/344 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P+ ++A+IDA VK + A + +M PD FTY+ LI+G C +DEA
Sbjct: 305 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 364
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ + M PNV TY LI GFC AKRV E + M +R + N T +L+ G+
Sbjct: 365 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 424
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
F+ D C+ A I +KM G P+
Sbjct: 425 FQAGD----------------------CDM-------------AQKIFKKMVSDGVPPDI 449
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + L L + + + K ++P TY +++E + KAG+ +G
Sbjct: 450 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 509
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + NV Y +I FC+ + + A + REM++ PN T+NTLI +D +
Sbjct: 510 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 569
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+ EL+ + CGF D T + +I+ L + L+ LS
Sbjct: 570 KAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEMLS 613
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 42/88 (47%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P+ +Y +I + + A F++M D P+ TYN LI R G
Sbjct: 510 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 569
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID 88
+ L+K+M G+ + T +++I+
Sbjct: 570 KAASAELIKEMRSCGFVGDASTISMVIN 597
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 151/492 (30%), Positives = 242/492 (49%), Gaps = 5/492 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP+ + V+ AL N +D A L + M+ C P+ Y LI + + VDEA
Sbjct: 205 GVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEA 264
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L+++M +G P+V T+ +I GFC RV E ++++ M + PN+ T L+HG
Sbjct: 265 LKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHG 324
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAA-ILRKMGDRGYLP 183
+ + +A LL + P + NTL+ N +EA A + KM + GY+P
Sbjct: 325 LCKTCRIDEAQALL----SKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVP 380
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF V L +++ +G KP +TY +L++ K G+ E L
Sbjct: 381 DVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLIL 440
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ N YN +I CK + A ++ EM + P++ TFN+LI G C+
Sbjct: 441 REMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRV 500
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E+ L ++ G + TFN++I R ++AL +++M+ G P + ITY
Sbjct: 501 DEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITY 560
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI++LC G V + L LF++M ++P I T N LI FC K+ A + M+
Sbjct: 561 NGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIH 620
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G PD +Y++LI L K GR EA F ++ G PDS T N ++ L ++G F++
Sbjct: 621 RGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDD 680
Query: 484 AHDIVKTSKERG 495
A ++ E G
Sbjct: 681 ACFLLYRGVENG 692
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 218/491 (44%), Gaps = 40/491 (8%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS R YN V+D LV N +A F M P+ +T+ +++ +C + VD A L
Sbjct: 173 PSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLL 232
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ M G PN Y LID RV E ++LE M P+ T ++++G R
Sbjct: 233 LRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCR 292
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
L R +E L +++ +G+ P T
Sbjct: 293 ----------LNRVLEGAKLVDRMIL-------------------------KGFTPNDMT 317
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL-NHV 246
+ Y + L ++E +L + P + L+ + GR E ++ + +
Sbjct: 318 YGYLMHGLCKTCRIDEAQALLS----KVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKM 373
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ V +V +++ +++ CK + A E+ +M + PNL T+ LI G CK ++
Sbjct: 374 INNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQL 433
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ +L +L GF + +N++I LC+ + +ALD EM G P+ T+N L
Sbjct: 434 EEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSL 493
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I LC + ++ +L L++ M + + + TFN LI +F R +I++A K ML G
Sbjct: 494 IFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGC 553
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
D +Y+ LIKAL K+G ++ F M + G P T N+++ G+ A +
Sbjct: 554 PLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALE 613
Query: 487 IVKTSKERGIS 497
++ RG S
Sbjct: 614 FMRDMIHRGFS 624
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 184/414 (44%), Gaps = 10/414 (2%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
GY + Y +LID A + R+L MKE + E+ ++ R P +A
Sbjct: 99 GYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQA 158
Query: 135 FELLIRFMER---EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
LL+ EP + N +L L + S A+ + M +G P TF
Sbjct: 159 TRLLLDMKGVYCCEPSFRSY--NVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLV 216
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ L +++ C +L K G P Y L++AL K R E + L +F
Sbjct: 217 MKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGC 276
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+VN++N VI FC++N + ++ M + PN +T+ L+ G CK + + +
Sbjct: 277 PPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQA 336
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL-SEMVEWGVPPNTITYNILIRSL 370
LL + P+ FN++++ R R +A + +M+ G P+ T++ L+ L
Sbjct: 337 LLSKVP----GPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGL 392
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C G +L L M A P++ T+ LI FC+ ++E+A MLT G +
Sbjct: 393 CKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNT 452
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
Y+ALI AL K G+ EA F M GC PD +T N ++ L + E+A
Sbjct: 453 VGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDA 506
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 17/291 (5%)
Query: 217 KPRFSTYLLLMEALYKAGRDVEGD--RYLNHVFKDRLVSNVN----SYNMVIDCFCKVNM 270
+P F +Y ++++ L V G+ ++VF D L V+ ++ +V+ C VN
Sbjct: 172 EPSFRSYNVVLDVL------VVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNE 225
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+D A + R+M PN + + TLI K V + +LL + G PD TFN+
Sbjct: 226 VDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNT 285
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I CR +R + + M+ G PN +TY L+ LC + + L K+
Sbjct: 286 VIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG-- 343
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFF-SMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
P++ FN L+ F R ++ +A + M+ G PD F++S L+ L K G F A
Sbjct: 344 --PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSA 401
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+ M+ GC P+ T ++++ ++G+ EEA I++ +G S +
Sbjct: 402 LELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNT 452
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 100/258 (38%), Gaps = 35/258 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYN--------------- 49
G S +T YNA+I AL K I A F +MS CKPD FT+N
Sbjct: 447 GFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDA 506
Query: 50 --------------------ILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDG 89
LIH R G + EAL+LV M G + TY LI
Sbjct: 507 LALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKA 566
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C V + + E M + + P+ T L++G H A E + + R
Sbjct: 567 LCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPD 626
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ N+L+ L EA + K+ G P+S T++ + L ++ C +L
Sbjct: 627 IVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLY 686
Query: 210 TFIKRGVKPRFSTYLLLM 227
++ G P T+ +L+
Sbjct: 687 RGVENGFVPNDVTWNILV 704
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 234/483 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN +ID L K+ +D+A FQ+M KP TYN +I G+C+ VD A
Sbjct: 255 GVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRA 314
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +QM G P+ TY +IDG C A+ + + V + M ++ V P+ T ++ G
Sbjct: 315 EGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDG 374
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A + + +++ N L++ + E +++M P+
Sbjct: 375 LCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPD 434
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L NE + D+ I++G+KP + Y +++ K G E LN
Sbjct: 435 VFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLN 494
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + N +N VI + K M+D I +M+ + ++PN+VT+ TLI CK
Sbjct: 495 LMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLG 554
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V ++ G P+ FNS++ LC ++E + EM+ G+ P+ + +N
Sbjct: 555 RVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFN 614
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++ +LC G V + RL M + PD+ ++N LI C +++++A K M++
Sbjct: 615 TVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSA 674
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL+P+ SY+ L+ K+GR D A F M + G P T N IL L + GRF EA
Sbjct: 675 GLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEA 734
Query: 485 HDI 487
++
Sbjct: 735 REL 737
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 150/552 (27%), Positives = 249/552 (45%), Gaps = 76/552 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS YN +ID L K+ ++D A FQQM KPD TYN +I G+C+ +D+A
Sbjct: 290 GVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKA 349
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +QM G P+ TYTI+IDG C A+ V V + M ++ V PN T L+HG
Sbjct: 350 EGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHG 409
Query: 125 -------------------------VF-------------RCLDPHKAFELLIRFMEREP 146
VF +C + F+ +IR +
Sbjct: 410 YLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPS 469
Query: 147 LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
+T + +L+ SE +L M G P F+ + ++E
Sbjct: 470 VT---IYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMH 526
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
I ++G+ P TY L++AL K GR + N + + + N +N ++ C
Sbjct: 527 IFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLC 586
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
V+ ++ E+ EM ++ I P++V FNT++ CK+ V + R L+ ++ G KPD
Sbjct: 587 TVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVI 646
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
++N++ID C A R ++A+ L MV G+ PN ++YN L+ C G + + LF++M
Sbjct: 647 SYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREM 706
Query: 387 QADRISPDIYTFNALIQ-----------------------------------SFCRMNKI 411
++P + T+N ++ FC+ N
Sbjct: 707 LRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCF 766
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
++A K F S+ ++ L+ D +++ +I L K GR ++A F ++ NG P T LI
Sbjct: 767 DEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLI 826
Query: 472 LETLVQQGRFEE 483
E L+++G EE
Sbjct: 827 AENLIEEGSLEE 838
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 132/501 (26%), Positives = 241/501 (48%), Gaps = 4/501 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP YN +ID L K+ +D A FQQM KP+ TYN +I G+C+ VD
Sbjct: 219 MGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDM 278
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + ++M G P+ TY +IDG C A+ V V + M +R V P+ T +++
Sbjct: 279 AEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIID 338
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + KA + + +++ L ++ L A + ++M D+G P
Sbjct: 339 GLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKP 398
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + ++ E + ++P TY LL++ L K G+ E
Sbjct: 399 NNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLF 458
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + + +V Y +++ + K + ++ M I+PN FNT+I + K
Sbjct: 459 DSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKR 518
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
A + + + + + + G P+ T+ ++ID LC+ R +DA+ ++M+ GV PN + +
Sbjct: 519 AMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVF 578
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L+ LC + + LF +M I PDI FN ++ + C+ ++ +A + SM+
Sbjct: 579 NSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVC 638
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+GL+PD SY+ LI + R DEA + M G P+ + N +L + GR +
Sbjct: 639 MGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDN 698
Query: 484 AHDIVKTSKERGISFKSFPGL 504
A+ + + +G++ PG+
Sbjct: 699 AYCLFREMLRKGVT----PGV 715
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 231/478 (48%), Gaps = 3/478 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP YN VI+ +D AY F +M V PD TYN +I G+C+ VD A
Sbjct: 190 SPDVVSYNIVINGFFNEGQVDKAYSLFLEMGV---SPDVVTYNTIIDGLCKAQEVDRAED 246
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+ +QM G PN TY +IDG C A+ V V + M ++ V P+ T +++ G+
Sbjct: 247 VFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLC 306
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ +A + + ++R + NT++ L +A + ++M D+G P++
Sbjct: 307 KAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNL 366
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L ++ G+ I +GVKP TY L+ G+ E + + +
Sbjct: 367 TYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM 426
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
L +V +Y +++D CK + A + M + I P++ + ++ G+ K +
Sbjct: 427 SAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGAL 486
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ +LL +++ G P+ FN++I + ++ + +M + G+ PN +TY L
Sbjct: 487 SEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTL 546
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I +LC +G V ++ F +M + ++P+ FN+L+ C ++K EK E+ F ML G+
Sbjct: 547 IDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGI 606
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
RPD ++ ++ L K GR EA++ SM G PD + N +++ R +EA
Sbjct: 607 RPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEA 664
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 124/496 (25%), Positives = 222/496 (44%), Gaps = 42/496 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P Y+ VI + ++L + F + + D N L+ G+C V EA+
Sbjct: 80 VAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAM 139
Query: 66 R-LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM---KERNVCPNEATVRSL 121
L++QM +G V +Y L+ G C+ +R E +L +M ++ + P+ + +
Sbjct: 140 HVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIV 199
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++G F KA+ L F+E + NT++ L A + ++M ++G
Sbjct: 200 INGFFNEGQVDKAYSL---FLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGV 256
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P + T++ + L +++ G+ + +GVKP
Sbjct: 257 KPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKP----------------------- 293
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
SNV +YN +ID CK +DRA + ++M DR + P+ VT+NT+I G C
Sbjct: 294 -----------SNV-TYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLC 341
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + K + +++ G KPD T+ +ID LC+A + A +M++ GV PN
Sbjct: 342 KAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNG 401
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN LI + G ++ ++M A + PD++T+ L+ C+ K +A F SM
Sbjct: 402 TYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSM 461
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ G++P Y ++ K G E M NG +P+ N ++ ++
Sbjct: 462 IRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMI 521
Query: 482 EEAHDIVKTSKERGIS 497
+E I K++G+S
Sbjct: 522 DEVMHIFIKMKQQGLS 537
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 134/531 (25%), Positives = 238/531 (44%), Gaps = 35/531 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y +ID L K+ S+D A FQQM KP+ TYN LIHG G +E
Sbjct: 360 GVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEV 419
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +K+M P+V+TY +L+D C + E + + M + + P+ ++HG
Sbjct: 420 VQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHG 479
Query: 125 -----------------VFRCLDP-HKAFELLIRF----------------MEREPLTQK 150
V + P H+ F +I M+++ L+
Sbjct: 480 YGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPN 539
Query: 151 LVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+V TL+ L +A +M + G P + F+ V L T + +
Sbjct: 540 VVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFL 599
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+ +G++P + ++ L K GR +E R ++ + L +V SYN +ID C +
Sbjct: 600 EMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFAS 659
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
MD A ++ M + PN+V++NTL+ G+CK + L +L G P T+N
Sbjct: 660 RMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYN 719
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++++ L R+ RF +A + M++ + TY+I++ C + ++FQ + +
Sbjct: 720 TILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSM 779
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ DI TFN +I + + E A F ++ GL P +Y + + LI+ G +E
Sbjct: 780 DLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEEL 839
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
F ME++G P+S+ N ++ L+ +G A + E+ S ++
Sbjct: 840 DCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEA 890
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 180/439 (41%), Gaps = 37/439 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI PS +Y ++ K ++ + M + P+ +N +I + ++DE
Sbjct: 465 GIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEV 524
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + +M+ G +PNV TY LID C RV + M V PN SLV+G
Sbjct: 525 MHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYG 584
Query: 125 VFRCLDPHKAFELLI-------------------------RFMEREPLTQKLVC------ 153
+ K EL + R ME L +VC
Sbjct: 585 LCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPD 644
Query: 154 ----NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
NTL+ S EA +L M G P +++ + ++ +
Sbjct: 645 VISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFR 704
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+++GV P TY ++ L+++GR E ++ K R + ++ +Y++++D FCK N
Sbjct: 705 EMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNN 764
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
D A +I + + D+ +++TFN +I G K +L + G P T+
Sbjct: 765 CFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYR 824
Query: 330 SMIDCLCRAHRFEDALDCL-SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+ + L E+ LDCL S M + G PN+ N LIR L G++ R+ K+
Sbjct: 825 LIAENLIEEGSLEE-LDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDE 883
Query: 389 DRISPDIYTFNALIQSFCR 407
S + T + LI F R
Sbjct: 884 KNFSLEASTTSMLISLFSR 902
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 108/281 (38%), Gaps = 7/281 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P YN +ID ++ +D A M KP+ +YN L+HG C+ G +D
Sbjct: 639 MGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDN 698
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L ++M G P V TY +++G + R +E + M + + T ++
Sbjct: 699 AYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILD 758
Query: 124 GVFR--CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
G + C D +AF++ + + N ++ L +A + + G
Sbjct: 759 GFCKNNCFD--EAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGL 816
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P T+ L+ L E + K G P L+ L G
Sbjct: 817 VPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGA 876
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT---EICR 279
YL+ + + ++ +M+I F + A E CR
Sbjct: 877 YLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSLPEKCR 917
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 145/497 (29%), Positives = 244/497 (49%), Gaps = 37/497 (7%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G P T YN ++DAL+K + A M P++ TYN+L+ G CR+G+
Sbjct: 239 MSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGL 298
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ EA ++++ M P V+TY +L++GFCN ++ E FR+ + M++ NV P+ T +
Sbjct: 299 LKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNT 358
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLV-CNTLLYRLSNNSMASEAAAILRKMGDR 179
L+ G + D + + L+ E + +K V CN + Y + IL+ M +
Sbjct: 359 LIDGCSQWRDSSEVYSLI------EEMDKKGVKCNAVTYNI-----------ILKWMCKK 401
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G + E++T LD + G+ P TY L+ A KAG+ +
Sbjct: 402 GNMTEATT-------------------TLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKA 442
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
R ++ + L + + N ++ C C +D A + R + V++ LI G
Sbjct: 443 FRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILG 502
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ KD + + L + E P T+NS+I LC++ + + A+D L+EM+E G+ P+
Sbjct: 503 YFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPD 562
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
TYNI+I C G+V ++ + +M + PD+YT N L++ CR +EKA K F
Sbjct: 563 ETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFN 622
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
++++ G D +Y+ +I +L K G+F+ A ME PD YT +I+ L G
Sbjct: 623 TLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAG 682
Query: 480 RFEEAHDIVKTSKERGI 496
R +EA + E GI
Sbjct: 683 RIKEAEEFTLKMVESGI 699
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 221/491 (45%), Gaps = 3/491 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL-- 65
PS L + I A V+ + LA F +M +P+ T N L++ + R L
Sbjct: 138 PSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLA 197
Query: 66 -RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++K LG PN ++ ILI G+C +V + + M E P+ + +++
Sbjct: 198 RQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDA 257
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A +LL+ + K N L+ + EA ++ M LP
Sbjct: 258 LLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPT 317
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ V ++E I D K V P TY L++ + E +
Sbjct: 318 VWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIE 377
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K + N +YN+++ CK M AT +M + ++P+ VT+NTLI +CK
Sbjct: 378 EMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAG 437
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ K ++ + G K D +T N+++ CLC + ++A + L + G + ++Y
Sbjct: 438 KMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYG 497
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
ILI R+L L+ +M+ +I P T+N++I C+ K+++A ML
Sbjct: 498 ILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLEN 557
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL PD +Y+ +I G ++A Q M +N PD YT N++L L ++G E+A
Sbjct: 558 GLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKA 617
Query: 485 HDIVKTSKERG 495
+ T +G
Sbjct: 618 LKLFNTLVSKG 628
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 125/261 (47%), Gaps = 4/261 (1%)
Query: 245 HVFKDRL----VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
V KD + V N NS+N++I +C + + A + +M + P+ V++NT++
Sbjct: 199 QVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDAL 258
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K + + R+LL+ + G P+K T+N ++ CR ++A + M + P
Sbjct: 259 LKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTV 318
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
TYN+L+ C G + + R+ +M+ + PD+ T+N LI + +
Sbjct: 319 WTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEE 378
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G++ + +Y+ ++K + K G EA T ME+NG +PD T N ++ + G+
Sbjct: 379 MDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGK 438
Query: 481 FEEAHDIVKTSKERGISFKSF 501
+A ++ +G+ ++
Sbjct: 439 MGKAFRMMDEMTSKGLKIDTW 459
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 116/224 (51%)
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A ++ ++ + PN +FN LI G+C +++V + + + E G PD ++N+++D
Sbjct: 197 ARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILD 256
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
L + ++A D L +M G+ PN TYN+L+ C +G + + ++ + M + + P
Sbjct: 257 ALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLP 316
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
++T+N L+ FC KI++A + M + + PD +Y+ LI + E
Sbjct: 317 TVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLI 376
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M++ G ++ T N+IL+ + ++G EA + +E G+S
Sbjct: 377 EEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLS 420
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 140/280 (50%), Gaps = 3/280 (1%)
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
FS L+ + + R E + + H +D + + I + +++ AT+I
Sbjct: 105 FSDAKSLLISFISSDRQHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFN 164
Query: 280 EMRDRDIAPNLVTFNTLISG---HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
+M+ + PNL+T NTL++ + + + R++L ++ G P+ +FN +I C
Sbjct: 165 KMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYC 224
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
+ +DALD +++M E+G P+T++YN ++ +L + + L M++ +SP+ +
Sbjct: 225 LESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKH 284
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
T+N L+ +CR+ +++A K M L P ++Y+ L+ G+ DEA + M
Sbjct: 285 TYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEM 344
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
E+ PD T N +++ Q E + +++ ++G+
Sbjct: 345 EKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGV 384
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 140/523 (26%), Positives = 263/523 (50%), Gaps = 35/523 (6%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ ++ A+ K N D+ +QM + +TY+IL++ CR + AL +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAV 138
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P++ T + L++G+C+ KR++E +++ M E P+ T +L+HG+F
Sbjct: 139 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFL 198
Query: 128 CLDPHKAFELLIRFMER--EP-----------------------LTQKL----------V 152
+A L+ R + R +P L +K+ +
Sbjct: 199 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVI 258
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
NT++ L +A + KM +G P+ T++ ++CL ++ +L I
Sbjct: 259 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMI 318
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+R + P T+ L++A K G+ +E ++ + + + + N+ +YN +I+ FC + +D
Sbjct: 319 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 378
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A +I M +D P++VT+NTLI G CK V + EL + + G + T+N++I
Sbjct: 379 EAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 438
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
L +A + A +MV GVPP+ ITY+IL+ LC G + ++L +F+ +Q ++
Sbjct: 439 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 498
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
P+IYT+N +I+ C+ K+E F S+ G++P+ Y+ +I + G +EA
Sbjct: 499 PNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 558
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
F M+++G PDS N ++ ++ G + +++K + G
Sbjct: 559 FREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCG 601
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 216/484 (44%), Gaps = 40/484 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P T +N +I L N A +M C+PD FTY +++G+C+ G +D
Sbjct: 180 MGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 239
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L+K+ME NV Y +IDG C K + + F + M+ + + P+ T SL+
Sbjct: 240 ALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLIS 299
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
CL CN + S+A+ +L M +R P
Sbjct: 300 ----CL-----------------------CNYGRW--------SDASRLLSDMIERKINP 324
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
TF+ + L E + D I+R + P TY L+ R E +
Sbjct: 325 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 384
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +V +YN +I FCK ++ E+ REM R + N VT+NTLI G +
Sbjct: 385 TLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 444
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ +++ ++ G PD T++ ++D LC+ + E AL + + + PN TY
Sbjct: 445 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTY 504
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI+I +C G V LF + + P++ + +I FCR E+A+ F M
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 564
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN--PDSYTSNLILETLVQQGRF 481
G PD+ Y+ LI+A ++ G D+A L E C D+ T ++++ L GR
Sbjct: 565 DGTLPDSGCYNTLIRARLRDG--DKAASAELIKEMRSCGFVGDASTISMVINML-HDGRL 621
Query: 482 EEAH 485
E+++
Sbjct: 622 EKSY 625
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 167/328 (50%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A A+L KM GY P+ T + G ++E ++D ++ G KP T+ L+
Sbjct: 135 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIH 194
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
L+ + E ++ + ++ +Y V++ CK +D A + ++M I
Sbjct: 195 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 254
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
N+V +NT+I G CK + +L + G KPD FT+NS+I CLC R+ DA L
Sbjct: 255 NVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLL 314
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
S+M+E + PN +T+N LI + G + + +LF +M I P+I T+N+LI FC
Sbjct: 315 SDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 374
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+++++A++ F M++ PD +Y+ LIK K+ R +E + F M Q G ++ T
Sbjct: 375 DRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 434
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGI 496
N +++ L Q G + A I K G+
Sbjct: 435 NTLIQGLFQAGDCDMAQKIFKKMVSDGV 462
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 132/243 (54%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
N +Y+++++CFC+ + + A + +M P++VT ++L++G+C + + L+
Sbjct: 115 NHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 174
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++E G+KPD TFN++I L ++ +A+ + MV G P+ TY ++ LC
Sbjct: 175 DQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 234
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
GD+ +L L +KM+ +I ++ +N +I C+ ++ A F M T G++PD F+Y
Sbjct: 235 GDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 294
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
++LI L GR+ +A + M + NP+ T N +++ ++G+ EA + +
Sbjct: 295 NSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 354
Query: 494 RGI 496
R I
Sbjct: 355 RSI 357
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 164/379 (43%), Gaps = 35/379 (9%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I + +YN +ID L K +D A+ F +M KPD FTYN LI +C G +A
Sbjct: 252 IEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDAS 311
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
RL+ M PNV T+ LID F ++ E ++ + M +R++ PN T SL++G
Sbjct: 312 RLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 371
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+A ++ + ++ L + NTL+ E + R+M RG + +
Sbjct: 372 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 431
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + L D + I + GV P TY +L++ L K G+ + +
Sbjct: 432 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 491
Query: 246 VFKDRLVSNVNSYNMVIDC-----------------------------------FCKVNM 270
+ K ++ N+ +YN++I+ FC+ +
Sbjct: 492 LQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 551
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+ A + REM++ P+ +NTLI +D + + EL+ + CGF D T +
Sbjct: 552 KEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISM 611
Query: 331 MIDCLCRAHRFEDALDCLS 349
+I+ L + L+ LS
Sbjct: 612 VINMLHDGRLEKSYLEMLS 630
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 123/255 (48%)
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ K R ++ ++ ++ K+N D + +M++ I N T++ L++ C+
Sbjct: 69 FGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCR 128
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+++ +L +++ G++PD T +S+++ C R +A+ + +MVE G P+T+T
Sbjct: 129 RSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVT 188
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+N LI L + ++ L +M A PD++T+ ++ C+ I+ A M
Sbjct: 189 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 248
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ + Y+ +I L K D+A F ME G PD +T N ++ L GR+
Sbjct: 249 KGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWS 308
Query: 483 EAHDIVKTSKERGIS 497
+A ++ ER I+
Sbjct: 309 DASRLLSDMIERKIN 323
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P+ +Y +I + + A F++M D PD YN LI R G
Sbjct: 527 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGD 586
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID 88
+ L+K+M G+ + T +++I+
Sbjct: 587 KAASAELIKEMRSCGFVGDASTISMVIN 614
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 141/495 (28%), Positives = 255/495 (51%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP+ YN++++AL K+ + A L F+++ + PD +Y+ LI+ + R G + AL
Sbjct: 6 SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+V +M+ G PN++TY L+D A + E R+L M++ P+ T L+ +
Sbjct: 66 VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ +AF L ER + N+L+Y L + +A +L +M G P+
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ +T L + + + +RG KP T+ LM+AL KAGR + L+ +
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ + V +YN +I F KV + A + EM+ P++VT++ LI+G K +++
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQL 305
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ ++L + + G PD T+N++I+ L +A DA M G P+ +TY+ L
Sbjct: 306 DEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTL 365
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I +L V + LF++M++ I PD++T+ ++I + +++ A++ F M GL
Sbjct: 366 ITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGL 425
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
PD +Y+A + +L + GRF EA++ F M+++G PD T + +L L + ++A
Sbjct: 426 SPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACG 485
Query: 487 IVKTSKERGISFKSF 501
++K E+G +F S
Sbjct: 486 LLKELIEQGCAFDSL 500
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 136/494 (27%), Positives = 231/494 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P R YN +I L K+ + A+ F +M C PD FTYN LI+G+ ++G +A
Sbjct: 109 GCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKA 168
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+++ME G P+V TY+ LI G + F++ + MK R P+ T +L+
Sbjct: 169 MELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDA 228
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A ELL ER + N L+ EA +L +M G P+
Sbjct: 229 LGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPD 288
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ +T L+ L+E C +L K G P TY L+ L KAG + R +
Sbjct: 289 VVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFD 348
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +V +Y+ +I K ++ A + EM I P+L T+ ++I+ K
Sbjct: 349 RMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAG 408
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V L + G PD T+N+ ++ L R RF++A +M E G+ P+ TY+
Sbjct: 409 QVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYD 468
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ L +V + L +++ + D F+ ++ +++A + +
Sbjct: 469 ALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSK 528
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL P SY+ALI AL K+GR EA T +++ G PD + + ++ L Q G+ + A
Sbjct: 529 GLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTA 588
Query: 485 HDIVKTSKERGISF 498
++++ +RG+
Sbjct: 589 FELLEEMSKRGLKL 602
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 215/470 (45%), Gaps = 40/470 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y+++I L K A+ FQ+M KPD T+ L+ + + G VD+A
Sbjct: 179 GCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDA 238
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+ +M+ G P V TY LI GF + E + +L+ MK P+ T L+ G
Sbjct: 239 LELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITG 298
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +A ++L + ME+E + NTL+ L + ++A + +M +G P
Sbjct: 299 LIKASQLDEACQVLKK-MEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNP 357
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ +T L + C + + G++P TY ++ L KAG+ + DR
Sbjct: 358 DVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLF 417
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ EMR + ++P+++T+N ++ +
Sbjct: 418 S-----------------------------------EMRGKGLSPDVITYNAFLNSLGRG 442
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ R++ + E G PD T+++++ L + +DA L E++E G +++ +
Sbjct: 443 GRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKF 502
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+ + L + G+V + L Q + + P ++NALI + + ++ +A +
Sbjct: 503 DECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKE 562
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG--CNPDSYTSNLI 471
G +PD SYS+LI AL ++G+ D A + M + G +P SY SNL+
Sbjct: 563 QGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSY-SNLV 611
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 107/259 (41%), Gaps = 35/259 (13%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI P Y ++I L K+ +D A F +M PD TYN ++ + R G E
Sbjct: 388 VGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKE 447
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ + M+ G P+V TY L+ G K V + +L+ + E+
Sbjct: 448 ARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGC------------ 495
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
AF+ L +F E C +L N EA +L+ +G P
Sbjct: 496 ----------AFDSL-KFDE---------CLEILTSWGN---VDEAHELLQFANSKGLWP 532
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+S+++ + L ++E L+ ++G KP +Y L+ AL + G+ L
Sbjct: 533 GASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELL 592
Query: 244 NHVFKDRLVSNVNSYNMVI 262
+ K L + SY+ ++
Sbjct: 593 EEMSKRGLKLSPRSYSNLV 611
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 236/465 (50%), Gaps = 1/465 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP+ + V+ + K + Y F+QM + PD YNILI G + G VDEA R
Sbjct: 5 SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L ++M +G P++YTY L++ FC ++ E + + M E+ P+ T +++ G+
Sbjct: 65 LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124
Query: 127 RCLDPHKAFELLI-RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ +A E+L + +ER + N L+ L + A +L +M +GY+P++
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ ++ L ++E D+ RG P Y L++ALYK G+ E +
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
V + + +YN ++ + + MD A E+ ++M APN T++ ++SGHC+ +
Sbjct: 245 VIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKK 304
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V ++L + + G PD T+N ++D LC+ + + A + S MV+ G P+ ++Y++
Sbjct: 305 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 364
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
++ LC V + LF +M ++ PD+ TFN L+ C+ K+++A+ M G
Sbjct: 365 VLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSG 424
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
PD +Y+ L+ L K GR +A + +M++ G D + + L
Sbjct: 425 CAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCFKAPL 469
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 195/385 (50%), Gaps = 1/385 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ PS YN++++A K + A F+ M+ +PD TY+ +I G+C+ G V E
Sbjct: 72 VGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTE 131
Query: 64 ALR-LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
AL L +M G + N Y LI+G C + + +++LE M + P+ T +++
Sbjct: 132 ALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTIL 191
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ R +A + R + N LL L EA + + + +GY+
Sbjct: 192 SGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYM 251
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P++ T++ + L +++E + + G P +TY +++ +A + + +
Sbjct: 252 PDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKV 311
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + K V +V +YN+++D CK N++D+A E+ M D AP++V+++ +++G CK
Sbjct: 312 LEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCK 371
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+VH R L ++E PD TFN ++D LC+A + ++A D L +M G P+ +
Sbjct: 372 TNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVA 431
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQ 387
YN L+ L G ++ RL Q M+
Sbjct: 432 YNTLMNGLRKQGRHIQADRLTQAMK 456
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 154/277 (55%), Gaps = 1/277 (0%)
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
R P T+ +++++ K G+ +G + + + + + YN++ID + K +D
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + EM + P++ T+N+L++ CK+ ++ + EL + E GF+PD T++++I
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121
Query: 334 CLCRAHRFEDALDCL-SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
LC+ + +AL+ L +M+E G NT+ YN LI LC ++ R+ +L ++M +
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PD T+N ++ CRM K+ +A++ F SM + G PD +Y+ L+ AL K G+ DEA +
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
F + G PD+ T N IL L ++ +EA ++ K
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFK 278
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 155/351 (44%), Gaps = 35/351 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S +T YNA+I+ L K +I+ AY ++M+ PD TYN ++ G+CR+G V EA
Sbjct: 144 GCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEA 203
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M GY+P+V Y L+D + E ++ + + + P+ T S++ G
Sbjct: 204 KQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLG 263
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R S EA + +KM G P
Sbjct: 264 LAR-----------------------------------KSNMDEAEEMFKKMVASGCAPN 288
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+T+ ++ +++ +L+ K G P TY +L++ L K + +
Sbjct: 289 GATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFS 348
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++ SY++V++ CK N + A + M +R + P++VTFN L+ G CK
Sbjct: 349 TMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAG 408
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
++ + ++LL + G PD +N++++ L + R A M E G
Sbjct: 409 KLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 459
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 110/248 (44%), Gaps = 36/248 (14%)
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
R+ +PN TF ++ CK ++ +L +L+ G PD +N +ID + R ++
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT------ 397
A EMV G+ P+ TYN L+ + C + ++ LF+ M PD+ T
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121
Query: 398 ------------------------------FNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+NALI C+ IE+A K M + G
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PDN +Y+ ++ L + G+ EAKQ F SM G +PD N +L+ L ++G+ +EA +
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241
Query: 488 VKTSKERG 495
K +G
Sbjct: 242 FKDVIAKG 249
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 118/261 (45%), Gaps = 9/261 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP YN ++DAL K D A F+ + PD TYN ++ G+ R +DEA
Sbjct: 214 GYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 273
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ K+M G APN TY+I++ G C AK+V + +VLE M + P+ T L+ G
Sbjct: 274 EEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDG 333
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + KA EL ++ + + +L L + +A + +M +R +P+
Sbjct: 334 LCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPD 393
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + L L+E +LD G P + Y LM L K GR
Sbjct: 394 VVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGR--------- 444
Query: 245 HVFKDRLVSNVNSYNMVIDCF 265
H+ DRL + + DCF
Sbjct: 445 HIQADRLTQAMKEKGFLSDCF 465
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 68/125 (54%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S +G P YN ++D L K+N +D A+ F M + C PD +Y+++++G+C+
Sbjct: 315 MSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNK 374
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V +A L +M P+V T+ IL+DG C A ++ E +L+ M P+ +
Sbjct: 375 VHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNT 434
Query: 121 LVHGV 125
L++G+
Sbjct: 435 LMNGL 439
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/508 (28%), Positives = 246/508 (48%), Gaps = 17/508 (3%)
Query: 5 GISPSTRLYNAVIDALVKS-NSIDLAYLK-FQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
G P YN+V+DA+V+S S+ L+ + +++M + P+ +TYNILI G C +G +
Sbjct: 172 GFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQ 231
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+ L +ME G PNV TY LID +C R+ E F +L+ M + + PN + ++
Sbjct: 232 KGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVII 291
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G+ R +A+E+L + ++ NTLL +A I +M G
Sbjct: 292 NGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVS 351
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T+ + + +LN D RG++P TY L++ + G E R
Sbjct: 352 PSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRI 411
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
LN + + +V +YN I C + M+ A + +EM ++ +AP++V+++T+ISG C+
Sbjct: 412 LNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCR 471
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
E+ + ++ ++E G PD T++S+I LC R +A D EM++ G+PP+ T
Sbjct: 472 KGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFT 531
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y LI + C GD+ ++L L +M PD T++ LI + + +A++ F ++
Sbjct: 532 YTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLI 591
Query: 423 TLGLRPDNFSYSALIK-----------ALIKS----GRFDEAKQTFLSMEQNGCNPDSYT 467
P + +Y LI+ ALIK G EA + F SM + P
Sbjct: 592 YEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAV 651
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERG 495
N+I+ + G +A ++ K G
Sbjct: 652 YNVIIHGHCRGGNLPKAFNLYKEMIHSG 679
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 214/461 (46%), Gaps = 16/461 (3%)
Query: 37 SVDQCKPDRF--------TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILID 88
S+ QC D + +++++ + ++D+A+ + + G+ P V +Y ++D
Sbjct: 126 SIFQCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLD 185
Query: 89 GFCNAK-----RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME 143
++ EV+R E+++ R V PN T L+ G + K
Sbjct: 186 AIVRSRGSVKLSAEEVYR--EMIRSR-VSPNVYTYNILIRGFCSVGELQKGLGCFGEMER 242
Query: 144 REPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
L + NTL+ EA +L+ M +G P +++ + L + E
Sbjct: 243 NGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKE 302
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
IL+ +G P TY L+ K G + + ++ + +V +Y +I+
Sbjct: 303 AWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALIN 362
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
CK ++RA E +MR R + PN T+ TLI G + +++ +L + E GF P
Sbjct: 363 SMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSP 422
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
T+N+ I C R E+AL + EMVE G+ P+ ++Y+ +I C G++ R+ ++
Sbjct: 423 SVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMK 482
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
Q+M +SPD T+++LIQ C M ++ +A ML +GL PD F+Y+ LI A
Sbjct: 483 QEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVE 542
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G ++A M G PD+ T ++++ L +Q R EA
Sbjct: 543 GDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREA 583
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 203/466 (43%), Gaps = 50/466 (10%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P+ YN +I+ L + S+ A+ ++M PD TYN L++G C+ G
Sbjct: 275 MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGN 334
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+AL + +M G +P+V TYT LI+ C A+ + + M+ R + PNE T +
Sbjct: 335 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 394
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G S + +EA IL +M + G
Sbjct: 395 LIDG-----------------------------------FSRQGLLNEAYRILNEMTESG 419
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ P T++ + + E G++ +++G+ P +Y ++ + G
Sbjct: 420 FSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAF 479
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + + + +Y+ +I C++ + A ++ +EM D + P+ T+ TLI+ +
Sbjct: 480 QMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAY 539
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C + +++K L ++ GF PD T++ +I+ L + R +A L +++ P+
Sbjct: 540 CVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSD 599
Query: 361 ITYNI---------------LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+TY+ LI+ C G + + R+F+ M P +N +I
Sbjct: 600 VTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGH 659
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
CR + KA + M+ G P + LIKAL K G +E +
Sbjct: 660 CRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSE 705
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 159/341 (46%)
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
S S+ A + R+M P T++ + + +L + G + G P
Sbjct: 190 SRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNV 249
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY L++A K GR E L + + N+ SYN++I+ C+ M A EI E
Sbjct: 250 VTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEE 309
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M + P+ VT+NTL++G+CK+ H+ + ++ G P T+ ++I+ +C+A
Sbjct: 310 MGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARN 369
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
A++ +M G+ PN TY LI G + + R+ +M SP + T+NA
Sbjct: 370 LNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNA 429
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
I C + ++E+A M+ GL PD SYS +I + G D A Q M + G
Sbjct: 430 FIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKG 489
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+PD+ T + +++ L + R EA D+ + + G+ F
Sbjct: 490 VSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEF 530
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 140/494 (28%), Positives = 239/494 (48%), Gaps = 13/494 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G ST N + L+++ S D F++M PD +TY+++I +C++ +D+A
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKA 179
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNV-CPNEATVRSLVH 123
++ + + G+ P V YTIL FC R+ + + RN+ P+ +++H
Sbjct: 180 FTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIF-----RNIPSPDAIAYNAIIH 234
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G R D A E L ER+ N L+ L S +A+ +L +M DRG P
Sbjct: 235 GHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTP 294
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ TF+ + L +L +R +P TY L+ L K +
Sbjct: 295 DTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLV 354
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ V +V +Y+++ D CK +D A E+ +EM + PNLVT+NTLI G CK
Sbjct: 355 DEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKA 414
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ K ELL L+ GF PD T+ ++D LC+ R + AL + M++ G P+ ITY
Sbjct: 415 SKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITY 474
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
L+ LC G V + +F++M + + D + +L+ +C+ ++ ++A+K +
Sbjct: 475 TALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQK-----VV 529
Query: 424 LGLRPDNF--SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G+R + Y+AL+ K GR DE F M GC P+ T N++++ L + G+
Sbjct: 530 DGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKV 589
Query: 482 EEAHDIVKTSKERG 495
+EA +++ G
Sbjct: 590 DEAFPFLESMHSAG 603
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 236/482 (48%), Gaps = 3/482 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP YNA+I + N D A ++M+ + PD FTYNILI G+C+ D+A
Sbjct: 223 SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASE 282
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++ +M G P+ T+ ++DG C A + +L +M ERN P+ T +L+ G+
Sbjct: 283 MLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLC 342
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + +A +L+ F+ + + + L L EA ++++M +G P
Sbjct: 343 KQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLV 402
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + L + +L++ + G P TY ++++ L K GR + + + +
Sbjct: 403 TYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGM 462
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K +V +Y +++ C+ +D A I +EM +D + + + +L++G+CK +
Sbjct: 463 LKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSS-- 520
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+T+E ++ P +N+++D C+ R ++ + +M G PN TYNI+
Sbjct: 521 -RTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIV 579
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ LC G V + + M + PD+ ++N +I + +K ++A + M+ G+
Sbjct: 580 MDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGI 639
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
PD +Y+ L+ K RFD+A +M + G +PD+ T N ++ L Q R +A++
Sbjct: 640 PPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYE 699
Query: 487 IV 488
++
Sbjct: 700 LM 701
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 229/485 (47%), Gaps = 4/485 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P T +N+++D L K+ + A+ M+ C+P TYN LI G+C+ VD A
Sbjct: 291 GVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRA 350
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LV + G+ P+V TY+IL DG C R+ E F +++ M + PN T +L+ G
Sbjct: 351 KDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDG 410
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + KA+ELL + + + ++ L +A ++ M RG P
Sbjct: 411 LCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPS 470
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L ++E I + + Y+ L+ K+ R E + ++
Sbjct: 471 VITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD 530
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ R ++ YN ++D +CK +D + +M R PN+ T+N ++ G CK
Sbjct: 531 GI---RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHG 587
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V + L + G PD ++N +ID L +A + ++A L +M++ G+PP+ +TYN
Sbjct: 588 KVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYN 647
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ C ++ + + M + PD T+N LI + N++ A + ML
Sbjct: 648 TLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRN 707
Query: 425 G-LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G + +Y+ +I L K G +A M +G ++ T N+ ++ L ++GR +E
Sbjct: 708 GCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDE 767
Query: 484 AHDIV 488
A ++
Sbjct: 768 ASSLL 772
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 225/494 (45%), Gaps = 11/494 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P +Y + A K+ + A F+ + PD YN +IHG CR D A
Sbjct: 190 GFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDGA 245
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +K+M AP+V+TY ILIDG C A + + +L M +R V P+ T S++ G
Sbjct: 246 LEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDG 305
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A LL ER NTL+ L A ++ + G++P+
Sbjct: 306 LCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPD 365
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ L ++E ++ +G P TY L++ L KA + + L
Sbjct: 366 VVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLE 425
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ V +V +Y +++D CK +D+A ++ M R P+++T+ L+ G C+
Sbjct: 426 SLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTG 485
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV--PPNTIT 362
V + + ++ D + S+++ C++ R ++A + V G+ P
Sbjct: 486 RVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA-----QKVVDGIRGTPYIDV 540
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN L+ C G + +F+ M P+I T+N ++ C+ K+++A SM
Sbjct: 541 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 600
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ G PD SY+ +I L K+ + EA+Q M Q G PD+ T N ++ ++ RF+
Sbjct: 601 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFD 660
Query: 483 EAHDIVKTSKERGI 496
+A I+K + G+
Sbjct: 661 DAVGILKNMIKAGV 674
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/495 (27%), Positives = 235/495 (47%), Gaps = 8/495 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y+ + D L K ID A+ ++MS C P+ TYN LI G+C+ ++A
Sbjct: 361 GFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKA 420
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ + G+ P+V TYTI++DG C R+ + +++E M +R P+ T +L+ G
Sbjct: 421 YELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEG 480
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R +A + + ++ L +L+ +S EA ++ G RG P
Sbjct: 481 LCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD--GIRG-TPY 537
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + L+E + + RG P TY ++M+ L K G+ E +L
Sbjct: 538 IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLE 597
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ V +V SYN++ID K + A ++ +M I P+ VT+NTL++ CK+
Sbjct: 598 SMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEE 657
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG-VPPNTITY 363
+L +++ G PD T+N++I L + +R DA + + EM+ G V TY
Sbjct: 658 RFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTY 717
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N +I LC G + ++L L M + + T+N I C+ ++++A M T
Sbjct: 718 NTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT 777
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM-EQNGCNPDSYTSNLILETLVQQGRFE 482
L D SY+ +I L K+ + D A + M G S+T NL+++ + R +
Sbjct: 778 L---RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLD 834
Query: 483 EAHDIVKTSKERGIS 497
EA ++ +RG S
Sbjct: 835 EALTLLGLMVQRGCS 849
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 184/398 (46%), Gaps = 39/398 (9%)
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
R DP A + +R N L L N + A+ +M D GY P+S
Sbjct: 102 RLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSY 161
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L +++ +LD RG KP S Y +L A K GR + +
Sbjct: 162 TYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDA----LEI 217
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
F++ + +YN +I C+ N D A E +EM +R +AP++ T+N LI G CK ++
Sbjct: 218 FRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKT 277
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE------------------------ 342
K E+L +++ G PD TFNS++D LC+A +FE
Sbjct: 278 DKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTL 337
Query: 343 -----------DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
A D + E V G P+ +TY+IL LC G + + L ++M
Sbjct: 338 ISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGC 397
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
+P++ T+N LI C+ +K EKA + S+++ G PD +Y+ ++ L K GR D+A +
Sbjct: 398 TPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALK 457
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
M + GC P T ++E L + GR +EAH I K
Sbjct: 458 MVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK 495
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 217/480 (45%), Gaps = 12/480 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +PS Y A+++ L ++ +D A+ F++M C D Y L++G C+ EA
Sbjct: 466 GCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA 525
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++V + G P + Y L+DG+C R+ E+ V E M R PN T ++ G
Sbjct: 526 QKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDG 582
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF L + + N ++ L S EA +L +M G P+
Sbjct: 583 LCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPD 642
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + ++ GIL IK GV P TY L+ L + R + ++
Sbjct: 643 AVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMH 702
Query: 245 HVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ ++ +VS +YN +ID CK + +A + M + N VT+N I CK+
Sbjct: 703 EMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKE 762
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW-GVPPNTIT 362
+ + LL E D+ ++ ++I LC+A + + A EMV G+ + T
Sbjct: 763 GRLDEASSLLS---EMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHT 819
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+N+LI + + +L L M SP + T+N +I C+++K++KA + F M
Sbjct: 820 FNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMA 879
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G+ + SY+ LI L GR EA Q M + C D +L E + +F+
Sbjct: 880 VRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEID----DLKWEDVAPHSQFQ 935
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 89/178 (50%), Gaps = 4/178 (2%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
GFK FT N + L + M++ G P++ TY+++I+SLC + + ++
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKA 179
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+ K + P++ + L ++FC+ +++ A + F ++ + PD +Y+A+I
Sbjct: 180 FTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIHG 235
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ D A + M + PD +T N++++ L + + ++A +++ +RG++
Sbjct: 236 HCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVT 293
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ G+ ++ +N +IDA K+ +D A M C P TYN++I +C++
Sbjct: 808 VAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDK 867
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
VD+A L +M G + +YT+LI G C R E +VLE M
Sbjct: 868 VDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 151/513 (29%), Positives = 235/513 (45%), Gaps = 40/513 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ + YN V+D LV + +A F M P +T+ +++ +C + VD A L
Sbjct: 168 PTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSL 227
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ M G PN Y LI C RV+E ++LE M P+ T ++HG+ R
Sbjct: 228 LRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCR 287
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
H+A +LL R + R T L L++ L EA A+L K+ + P +
Sbjct: 288 AGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVL 343
Query: 188 FDYTVTCLVTGLDLNETCGIL-DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
++ ++ V E +L + + G +P T+ ++++ L K G V LN +
Sbjct: 344 YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEM 403
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
R NV +Y ++I+ FCK ++ A EI M + ++ N V +N LI CKD +
Sbjct: 404 VAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNI 463
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI- 365
+ +L + G KPD +TFNS+I+ LC+ H+ E+AL +M GV NT+TYN
Sbjct: 464 EEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTL 523
Query: 366 ----------------------------------LIRSLCAIGDVARSLRLFQKMQADRI 391
LI++LC G V + L LF++M I
Sbjct: 524 VHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGI 583
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
P I + N LI CR K+ A K M+ GL PD +Y++LI L K G EA
Sbjct: 584 FPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASN 643
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
F ++ G PD+ T N ++ +G F +A
Sbjct: 644 LFNKLQSEGIRPDAITYNTLISRHCHEGMFNDA 676
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 150/537 (27%), Positives = 240/537 (44%), Gaps = 55/537 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP+ + V+ AL + +D A + M+ C P+ Y LIH +C V EA
Sbjct: 200 GVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEA 259
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L++ M + P+V T+ +I G C A R+ E ++L+ M R + T L+HG
Sbjct: 260 LQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHG 319
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAIL-RKMGDRGYLP 183
+ R +A LL + P ++ NTL+ + EA +L M GY P
Sbjct: 320 LCRMGQVDEARALL----NKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEP 375
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ TF+ + LV L +L+ + + +P TY +L+ K GR E +
Sbjct: 376 DAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIV 435
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + L N YN +I CK ++ A ++ EM + P++ TFN+LI+G CK+
Sbjct: 436 NSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKN 495
Query: 304 AEVHKTRELLV----MLLEC----------------------------------GFKPDK 325
HK E L M LE G D
Sbjct: 496 ---HKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDN 552
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T+N +I LC+ E L EM+ G+ P I+ NILI LC G V +L+ Q
Sbjct: 553 ITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQD 612
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M ++PDI T+N+LI C+M +++A F + + G+RPD +Y+ LI G
Sbjct: 613 MIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGM 672
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ----GRFEEAHDIVKTSKERGISF 498
F++A +G P+ T ++++ +V++ RF + + E G+SF
Sbjct: 673 FNDACLLLYKGVDSGFIPNEVTWSILINYIVKKIPWGARFSKDFTV-----ECGVSF 724
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 162/338 (47%), Gaps = 20/338 (5%)
Query: 172 ILRKMGDRGYLPESSTFDYTVTCL-VTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
+L++M D G L + S F + GL T +LD + P F +Y ++++ L
Sbjct: 121 LLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDIL 180
Query: 231 YKAGRDVEGD--RYLNHVFKDRLVSNVN----SYNMVIDCFCKVNMMDRATEICREMRDR 284
V+GD R +VF D L V+ ++ +V+ C V+ +D A + R+M
Sbjct: 181 ------VDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKH 234
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLV-MLLECGFKPDKFTFNSMIDCLCRAHRFED 343
PN V + TLI C++ V + +LL M L C +PD TFN +I LCRA R +
Sbjct: 235 GCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMC-CEPDVQTFNDVIHGLCRAGRIHE 293
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A L M+ G + +TY L+ LC +G V + L K+ +P+ +N LI
Sbjct: 294 AAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP----NPNTVLYNTLIS 349
Query: 404 SFCRMNKIEKAEKAFFS-MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+ + E+A+ ++ M+ G PD ++++ +I L+K G A + M
Sbjct: 350 GYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFE 409
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
P+ T +++ +QGR EEA +IV + +G+S +
Sbjct: 410 PNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNT 447
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 239/484 (49%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N+++ LVK + ++LA+ +++ + + +T NI+++ +C+ G D+ + +MEG
Sbjct: 87 NSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEG 146
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G ++ TY LI +C + E F ++ M ++ + P+ T ++++G+ + +
Sbjct: 147 NGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYAR 206
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A +LI + NTLL SEA I +M +G +P+ +F +
Sbjct: 207 AKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIA 266
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
L++ K G+ P Y +LM + G +E + + + + V
Sbjct: 267 VFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL 326
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+V +YN +++ CK M+ A ++ EM +R P+ TF TLI GHC+D + K L
Sbjct: 327 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 386
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ + KPD +N++ID C+ E A + M+ + PN ITY ILI + C++
Sbjct: 387 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSV 446
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G V+ + RL+ M I P + T N +I+ +CR KA++ M+ G+ PD+ SY
Sbjct: 447 GHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISY 506
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ LI ++ D+A ME+ G PD T N+++ +QGR +EA +++ E
Sbjct: 507 NTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIE 566
Query: 494 RGIS 497
+GI+
Sbjct: 567 KGIN 570
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 219/464 (47%), Gaps = 8/464 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI YN +I A + ++ A+ M+ KP FTYN +I+G+C+ G A
Sbjct: 148 GIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARA 207
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +M +G +P+ TY L+ C +E + M + V P+ + SL+
Sbjct: 208 KGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLI-A 266
Query: 125 VF---RCLDPHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
VF R LD + R M++ L ++ L++ N EA I +M ++G
Sbjct: 267 VFSRNRHLDQALVY---FRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQG 323
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ + ++ + L L + + D ++RG P F T+ L+ + G +
Sbjct: 324 CVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKAL 383
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + ++ +YN +ID FCKV M++A+E+ M R I PN +T+ LI+ +
Sbjct: 384 SLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAY 443
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C V + L +++E G KP T N++I CR+ A + L M+ GV P+
Sbjct: 444 CSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDH 503
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
I+YN LI ++ ++ KM+ + + PDI T+N ++ FCR ++++AE
Sbjct: 504 ISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRK 563
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
M+ G+ PD +Y+ALI + +EA + M Q G PD
Sbjct: 564 MIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 197/426 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS YNA+I+ L K A +M PD TYN L+ CR EA
Sbjct: 183 GLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEA 242
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G P++ +++ LI F + + + MK+ + P+ L+HG
Sbjct: 243 KEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHG 302
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + +A ++ +E+ + + NT+L L M ++A + +M +RG LP+
Sbjct: 303 YCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPD 362
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + ++ + + T +R +KP Y L++ K G + +
Sbjct: 363 FYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWD 422
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ N +Y ++I+ +C V + A + M ++ I P LVT NT+I G+C+
Sbjct: 423 GMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSG 482
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ K E L ++ G PD ++N++I+ R + A +++M + G+ P+ ITYN
Sbjct: 483 DSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYN 542
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+++ C G + + + +KM I+PD T+ ALI + + +A + ML
Sbjct: 543 VVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQR 602
Query: 425 GLRPDN 430
G PD+
Sbjct: 603 GFAPDD 608
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 171/365 (46%), Gaps = 16/365 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P ++++I ++ +D A + F+ M PD Y +L+HG CR G + EA
Sbjct: 253 GVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEA 312
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ +M G +V Y +++G C K + + ++ + M ER P+ T +L+HG
Sbjct: 313 LKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHG 372
Query: 125 VFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
C D + KA L +R + NTL+ +A+ + M R
Sbjct: 373 --HCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIF 430
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T+ + + ++E + D I++G+KP T +++ ++G + D +
Sbjct: 431 PNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEF 490
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + + + SYN +I+ F + + MD+A +M + P+++T+N +++G C+
Sbjct: 491 LGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCR 550
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMI------DCLCRAHRFEDALDCLSEMVEWGV 356
+ + +L ++E G PD+ T+ ++I D L A RF D EM++ G
Sbjct: 551 QGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHD------EMLQRGF 604
Query: 357 PPNTI 361
P+ +
Sbjct: 605 APDDV 609
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 125/248 (50%), Gaps = 1/248 (0%)
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K LVS +N+ N ++ K++ ++ A E+ RE+ I N+ T N +++ CKD +
Sbjct: 77 KGYLVS-INACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFD 135
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ L + G D T+N++I CR E+A + ++ M + G+ P+ TYN +I
Sbjct: 136 DVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAII 195
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G AR+ + +M +SPD T+N L+ CR + +A++ F ML G+
Sbjct: 196 NGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVV 255
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD S+S+LI ++ D+A F M++ G PD+ +++ + G EA I
Sbjct: 256 PDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKI 315
Query: 488 VKTSKERG 495
E+G
Sbjct: 316 RDEMLEQG 323
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 116/239 (48%)
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
++++I + + + TE R +R + ++ N+L+ G K V E+ ++
Sbjct: 51 FDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVV 110
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
G + + +T N M++ LC+ +F+D LSEM G+ + +TYN LI + C G +
Sbjct: 111 RSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLE 170
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+ + M + P ++T+NA+I C+ + +A+ ML +GL PD +Y+ L+
Sbjct: 171 EAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLL 230
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ F EAK+ F M + G PD + + ++ + ++A + K+ G+
Sbjct: 231 VESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGL 289
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%)
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
N + F+ LI + + ++ + E +L G+ NS++ L + E A +
Sbjct: 45 GTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWE 104
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
E+V G+ N T NI++ +LC G +M+ + I D+ T+N LI ++C
Sbjct: 105 VHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYC 164
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R +E+A + SM GL+P F+Y+A+I L K GR+ AK + M G +PD+
Sbjct: 165 REGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTT 224
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGI 496
T N +L ++ F EA +I +G+
Sbjct: 225 TYNTLLVESCRRDNFSEAKEIFGEMLRQGV 254
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 2/179 (1%)
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
CG + F+ +I +A + + + + G + N L+ L I V
Sbjct: 44 CG--TNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVEL 101
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+ + +++ I ++YT N ++ + C+ K + + M G+ D +Y+ LI
Sbjct: 102 AWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIG 161
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
A + G +EA + SM G P +T N I+ L ++GR+ A I+ G+S
Sbjct: 162 AYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLS 220
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 251/489 (51%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ LG+S + YN +I+ L + + + A +M P T N L++G C
Sbjct: 91 MEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 150
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ EA+ LV QM +GY P+ T+T L+ G + +E ++E M + P+ T +
Sbjct: 151 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+++G+ + +P A LL + + + ++ +T++ L +A + +M ++G
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T+ ++CL ++ +L ++R + P T+ L++A K G+ +E +
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + + + N+ +YN +I+ FC + +D A +I M +D P++VT+NTLI+G
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK +V EL + G + T+ ++I +A ++A +MV GV PN
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TYN L+ LC G + +++ +F+ +Q ++ PDIYT+N + + C+ K+E F S
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+ G++PD +Y+ +I K G +EA F+ M+++G PDS T N ++ ++ G
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Query: 481 FEEAHDIVK 489
+ +++K
Sbjct: 571 KAASAELIK 579
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 227/471 (48%)
Query: 26 IDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTI 85
+D A F +M + P ++ L+ I ++ D + ++ME LG + N+YTY I
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
+I+ C +++ +L M + P+ T+ SL++G +A L+ + +E
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
+ TL++ L ++ ASEA A++ +M +G P+ T+ + L + +
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
+L+ K ++ Y ++++L K + + + +V +Y+ +I C
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C A+ + +M +R I PN+VTFN+LI K+ ++ + +L +++ P+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T+NS+I+ C R ++A + MV P+ +TYN LI C V + LF+
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M + + T+ LI F + + + A+ F M++ G+ P+ +Y+ L+ L K+G+
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++A F ++++ PD YT N++ E + + G+ E+ D+ + +G+
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV 516
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 186/410 (45%), Gaps = 1/410 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y AVI+ L K DLA +M + + D Y+ +I +C+ VD+A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M+ G P+V+TY+ LI CN R ++ R+L M ER + PN T SL+
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +L ++R + N+L+ + EA I M + LP+
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + + + +RG+ TY L+ ++A
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D + N+ +YN ++D CK +++A + ++ + P++ T+N + G CK
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V +L L G KPD +N+MI C+ E+A +M E G P++ TYN
Sbjct: 500 KVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYN 559
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
LIR+ GD A S L ++M++ R + D T+ L+ +++K
Sbjct: 560 TLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKG 608
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 148/344 (43%), Gaps = 35/344 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P+ +N++IDA K + A F +M P+ TYN LI+G C +DEA
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
++ M P+V TY LI+GFC AK+V + + M R + N T +L+HG
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
F+ D C+ A + ++M G P
Sbjct: 426 FQASD----------------------CDN-------------AQMVFKQMVSDGVHPNI 450
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + L L + + + K ++P TY ++ E + KAG+ +G
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + +V +YN +I FCK + + A + +M++ P+ T+NTLI H +D +
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+ EL+ + C F D T+ + D L + L+ LS
Sbjct: 571 KAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLEVLS 614
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 73/156 (46%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ ++A+D EMV+ P+ + ++ L+ ++ + + +KM+ +S ++YT+N
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
+I CR +++ A M+ LG P + ++L+ R EA M +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G PD+ T ++ L Q + EA +V+ +G
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 200
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P YN +I K + AY F +M D PD TYN LI R G
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID 88
+ L+K+M +A + TY ++ D
Sbjct: 571 KAASAELIKEMRSCRFAGDASTYGLVTD 598
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 143/498 (28%), Positives = 237/498 (47%), Gaps = 36/498 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP YN +++A + + A +M D P + TYN L+ R+G + +A
Sbjct: 238 GLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQA 297
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVH 123
++V+ M G+ P++ TY +L G C A +V E FR+ + M+ + P+ T +LV
Sbjct: 298 TKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVD 357
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
F+ +R S S+A +L +M D+G P
Sbjct: 358 ACFK------------------------------WRCS-----SDALRLLEEMRDKGVKP 382
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T + V L L E G L+ + G+ P TY L++A KAG + +
Sbjct: 383 TLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLM 442
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + L + + N V+ CK+ + A E+ R P+ V++ T+++ + K+
Sbjct: 443 DEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKE 502
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
L ++E P T+N++I LCR R ++A+D L+E+VE G+ P+ TY
Sbjct: 503 YNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTY 562
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI+I + C GD+ + R KM + PD+ T N L+ C K++KA K F S +
Sbjct: 563 NIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVE 622
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G + D +Y+ LI+++ K G D A F ME G PD++T N++L L + GR EE
Sbjct: 623 KGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEE 682
Query: 484 AHDIVKTSKERGISFKSF 501
AH+++ + G +SF
Sbjct: 683 AHNMLHKLADSGKLSQSF 700
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/513 (24%), Positives = 231/513 (45%), Gaps = 37/513 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P+ YN ++ A + I A + M+ +PD TYN+L G+C+ G VDEA
Sbjct: 273 GIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEA 332
Query: 65 LRLVKQMEGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
RL +ME L A P+V TY L+D + ++ R+LE M+++ V P T +V
Sbjct: 333 FRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVK 392
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +A L + E + NTL+ ++A ++ +M +G
Sbjct: 393 SLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKM 452
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ T + + L + +L + +RG P +Y +M A +K R
Sbjct: 453 DTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLW 512
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + +L+ ++++YN +I C++ + A + E+ ++ + P+ T+N +I +CK+
Sbjct: 513 DQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKE 572
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ ++E FKPD T N++++ LC + + AL VE G + ITY
Sbjct: 573 GDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITY 632
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI+S+C +GDV +L F M+ + PD +T+N ++ + + E+A +
Sbjct: 633 NTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692
Query: 424 LG----------LRP------------------------DNF--SYSALIKALIKSGRFD 447
G L+P DN +Y + L G+
Sbjct: 693 SGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLK 752
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
EAK M Q G DS T ++E L+++ +
Sbjct: 753 EAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQK 785
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 166/358 (46%), Gaps = 4/358 (1%)
Query: 131 PHKAFELLIRFMEREPLTQKL-VCNTLLYRLSNN--SMASEAAAILRKMGDRGYLPESST 187
PH A +LL R + L N +L LS + ++ + + R + + P T
Sbjct: 151 PHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYT 210
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
F+ V + L + L T G+ P TY L+ A + G E L +
Sbjct: 211 FNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 270
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+D + +YN ++ F ++ + +AT++ M P+L T+N L G C+ +V
Sbjct: 271 RDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVD 330
Query: 308 KTRELLVMLLECGFK-PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ L + PD T+N+++D + DAL L EM + GV P +T+NI+
Sbjct: 331 EAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIV 390
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
++SLC G + +L +K+ + ++PD+ T+N LI ++C+ + KA M+ GL
Sbjct: 391 VKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGL 450
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ D F+ + ++ L K R+++A++ S Q G PD + ++ ++ E A
Sbjct: 451 KMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPA 508
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 123/278 (44%), Gaps = 39/278 (14%)
Query: 259 NMVIDCFCKVNMMDRATEICREMRDR-DIAPNLVTFNTLISGHCKDAEVHKTRELLVM-- 315
+ + + ++ + A ++ +R R + P+L N ++S + L V
Sbjct: 139 DAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRS 198
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
L+E P+ +TFN ++ C DAL LS M +G+ P+ +TYN L+ + C G
Sbjct: 199 LIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGM 258
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+ + L +M+ D I+P T+N L+ +F R+ I++A K SM G PD +Y+
Sbjct: 259 LGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNV 318
Query: 436 LIKALIKSGRFDEAKQTFLSMEQ------------------------------------N 459
L L ++G+ DEA + ME+
Sbjct: 319 LAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDK 378
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G P T N+++++L ++G+ EEA ++ E G++
Sbjct: 379 GVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLA 416
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 254/494 (51%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGIS Y+ I+ + + + LA +M +PD T + L++G C + +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ LV QM +GY P+ +T+T LI G + +E +++ M +R P+ T ++V+
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + D A LL + + + ++ NT++ L +A + +M ++G P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ ++CL ++ +L I+R + P T+ L++A K G+ VE ++
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K + ++ +Y+ +I+ FC + +D A + M +D PN+VT++TLI G CK
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V + EL + + G + T+ ++I +A ++A +MV GV PN +TY
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NIL+ LC G +A+++ +F+ +Q + PDIYT+N +I+ C+ K+E + F ++
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ P+ +Y+ +I + G +EA M+++G P+S T N ++ ++ G E
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREA 591
Query: 484 AHDIVKTSKERGIS 497
+ +++K + G +
Sbjct: 592 SAELIKEMRSCGFA 605
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 131/537 (24%), Positives = 240/537 (44%), Gaps = 84/537 (15%)
Query: 2 SFLGISPSTR--LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
SF S R L N + D + +++DL F M + P +N L+ + ++
Sbjct: 42 SFASASGDYREILRNRLSDIIKVDDAVDL----FGDMVKSRPFPSIVEFNKLLSAVAKMN 97
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+ + L +QM+ LG + ++YTY+I I+ FC +++ VL M + P+ T+
Sbjct: 98 KFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS 157
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
SL++G C++ S+A A++ +M +
Sbjct: 158 SLLNGY---------------------------CHS--------KRISDAVALVDQMVEM 182
Query: 180 GYLPESSTFDYTVTCLVTGLDLN----ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
GY P++ TF T L+ GL L+ E ++D ++RG +P TY ++ L K G
Sbjct: 183 GYKPDTFTF----TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR------------- 282
L + K ++ ++V YN +ID CK MD A + EM
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 283 ----------------------DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
+R I PN+VTF+ LI K+ ++ + +L +++
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
PD FT++S+I+ C R ++A M+ PN +TY+ LI+ C V +
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
LF++M + + T+ LI F + + A+ F M+++G+ P+ +Y+ L+ L
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
K+G+ +A F ++++ PD YT N+++E + + G+ E+ ++ +G+S
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS 535
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 152/344 (44%), Gaps = 35/344 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P+ ++A+IDA VK + A + +M PD FTY+ LI+G C +DEA
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ + M PNV TY+ LI GFC AKRV E + M +R + N T +L+HG
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
F+ D C+ A + ++M G P
Sbjct: 444 FQARD----------------------CDN-------------AQMVFKQMVSVGVHPNI 468
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + L L + + + + ++P TY +++E + KAG+ +G +
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + NV +YN +I FC+ + A + ++M++ PN T+NTLI +D +
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+ EL+ + CGF D T + + L + LD LS
Sbjct: 589 REASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 632
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 55/137 (40%)
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
IL L I V ++ LF M R P I FN L+ + +MNK E M TL
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ D ++YS I + + A M + G PD T + +L R +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 485 HDIVKTSKERGISFKSF 501
+V E G +F
Sbjct: 173 VALVDQMVEMGYKPDTF 189
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+SP+ YN +I + S + A ++M D P+ TYN LI R G
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID 88
+ + L+K+M G+A + T ++ +
Sbjct: 589 REASAELIKEMRSCGFAGDASTIGLVTN 616
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/491 (28%), Positives = 246/491 (50%), Gaps = 2/491 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P T +N ++ +LV A ++QM + + +PD FT NI+I+ C G V A
Sbjct: 55 TPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFS 114
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
V ++ LGY PN T L+ G C +V E R + + + + + L++GV
Sbjct: 115 GVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVC 174
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMGDRGYLPES 185
+ + A LL R +ER + +V +++ RL +++ EA + +M +G P+
Sbjct: 175 KIGETRAAIRLL-RRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDV 233
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ V+ LN +L+ + + P TY +L++AL K G+ E + L
Sbjct: 234 VTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAV 293
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ K + +V Y+ ++D +C VN ++ A + M + P++ ++ +I+G CK
Sbjct: 294 MVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKR 353
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V + L + + PD T+ S+IDCLC++ R D EM++ G PP+ ITYN
Sbjct: 354 VDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNN 413
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI +LC G + R++ LF KM+ I P++YTF L+ C++ +++ A + F +LT G
Sbjct: 414 LIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKG 473
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ +Y+ +I L K G DEA ME NGC D+ T +++ + ++A
Sbjct: 474 YCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAE 533
Query: 486 DIVKTSKERGI 496
+V+ RG+
Sbjct: 534 KLVREMIARGL 544
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 198/432 (45%), Gaps = 18/432 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQC-KPDRFTYNILIHGICRIGVVD 62
LG P+T N ++ L + A L+F + Q + +Y ILI+G+C+IG
Sbjct: 122 LGYQPNTITLNTLMKGLCLEGKVKEA-LRFHDKVLAQGFRLSGISYGILINGVCKIGETR 180
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A+RL++++E PNV Y+++ID C V E + + M + + P+ T LV
Sbjct: 181 AAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILV 240
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMGDRGY 181
G ++A +LL M E + + T+L L EA +L M
Sbjct: 241 SGFCIVGQLNRAIDLLNE-MVLENINPDIYTYTILVDALCKEGKVKEAENVLAVM----- 294
Query: 182 LPESSTFDYTV-------TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
+ D V CLV ++N + T + GV P Y +++ L K
Sbjct: 295 VKACVNLDVVVYSTLMDGYCLVN--EVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIK 352
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
R E + + +V + +Y +IDC CK + ++ EM DR P+++T+N
Sbjct: 353 RVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYN 412
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
LI CK+ + + L + + +P+ +TF ++D LC+ R ++AL+ +++
Sbjct: 413 NLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTK 472
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G N TY ++I LC G + +L L +M+ + D TF +I++F ++ +KA
Sbjct: 473 GYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKA 532
Query: 415 EKAFFSMLTLGL 426
EK M+ GL
Sbjct: 533 EKLVREMIARGL 544
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 123/246 (50%)
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
NH+F + +N ++ V A + ++M ++ P+ T N +I+ C
Sbjct: 46 FNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCH 105
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+V + +L+ G++P+ T N+++ LC + ++AL +++ G + I+
Sbjct: 106 FGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGIS 165
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y ILI +C IG+ ++RL ++++ I P++ ++ +I C+ +++A + M+
Sbjct: 166 YGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMV 225
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G+ PD +YS L+ G+ + A M NPD YT ++++ L ++G+ +
Sbjct: 226 GKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVK 285
Query: 483 EAHDIV 488
EA +++
Sbjct: 286 EAENVL 291
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P F FN ++ L R+ A+ +M V P+ T NI+I C G V +
Sbjct: 56 PHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSG 115
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
K+ P+ T N L++ C K+++A + +L G R SY LI + K
Sbjct: 116 VSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCK 175
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G A + +E+ P+ ++I++ L + +EA+D+ +GIS
Sbjct: 176 IGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGIS 230
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%)
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
H +DA+ + M P+T +N ++ SL + ++ L+++M+ + PD +T
Sbjct: 36 THNADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFT 95
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
N +I FC ++ A +L LG +P+ + + L+K L G+ EA
Sbjct: 96 LNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEA 147
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/439 (30%), Positives = 225/439 (51%), Gaps = 7/439 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YNA++ L + A +++M PD TYN L+HG C++G +DEA
Sbjct: 5 GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEA 64
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ G+ P+V TY LI+GFC A ++ E R+L+ M N+ P+ T SLV+G
Sbjct: 65 LKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNG 124
Query: 125 VFRCLDPHKAFELLI-RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +A L++ + +T + + L L SEA + + +GY P
Sbjct: 125 LCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRG---VSEALKLFGSVLKQGYEP 181
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
E T++ + L+ +NE + +K G++P TY + ++ L KAGR + L
Sbjct: 182 EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLML 241
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + V +V S+N VI+ CK +D A + M + +PN ++FNTLI G C+
Sbjct: 242 KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRA 301
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH---RFEDALDCLSEMVEWGVPPNT 360
+ K +L+ G KP T+N ++D LC+A R ++A+ M+E G P+
Sbjct: 302 GKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDV 361
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TY+ LI L G + + RL M+A P++YT+N+LI C + K+++A + F +
Sbjct: 362 VTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVA 421
Query: 421 MLTLGLRPDNFSYSALIKA 439
M+ G PD +Y +I A
Sbjct: 422 MVEKGCVPDTITYGTIISA 440
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 205/425 (48%), Gaps = 7/425 (1%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
G+ PN TY L+ G CN R+++ + E M + P+ T +L+HG + + +A
Sbjct: 5 GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEA 64
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
++ ++R + + N L+ EA IL++M +P+ T++ V
Sbjct: 65 LKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNG 124
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV-EGDRYLNHVFKDRLVS 253
L ++E ++ + +G P TY L+ L + R V E + V K
Sbjct: 125 LCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEP 181
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
V +YN++ID K + ++ A E+ + + P+ +T+ I G CK V +L
Sbjct: 182 EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLML 241
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ E G PD + N++I+ LC+ R ++A LS M G PN I++N LI C
Sbjct: 242 KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRA 301
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM---NKIEKAEKAFFSMLTLGLRPDN 430
G +++ F++M + P + T+N L+ C+ +I++A F +M+ G PD
Sbjct: 302 GKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDV 361
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+YSALI L K+G+ D+A++ +ME GC P+ YT N ++ L + +EA ++
Sbjct: 362 VTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVA 421
Query: 491 SKERG 495
E+G
Sbjct: 422 MVEKG 426
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 160/322 (49%), Gaps = 4/322 (1%)
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
M G+ P T++ ++ L G +++ + + IK G P TY L+ K G
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
E + + K V +V +YN +I+ FCK + +D A I + M ++ P++VT+N+
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR-FEDALDCLSEMVEW 354
L++G CK+ V + R L+V + GF P+ T++++I LCR R +AL +++
Sbjct: 121 LVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G P TYNILI L V + LF + + PD T+ I C+ ++E A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
M G PD S++A+I L K R DEA+ ME GC+P++ + N ++
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297
Query: 475 LVQQGRFEEAHDIVKTSKERGI 496
+ G++++A K +RG+
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGV 319
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 148/286 (51%), Gaps = 4/286 (1%)
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
K G P TY L+ L GR + + K +V +YN ++ FCKV +D
Sbjct: 3 KHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELD 62
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A +I R P++VT+N LI+G CK ++ + + +L ++ PD T+NS++
Sbjct: 63 EALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLV 122
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC-AIGDVARSLRLFQKMQADRI 391
+ LC+ R ++A + V+ G PN ITY+ LI LC + V+ +L+LF +
Sbjct: 123 NGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGY 179
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
P++ T+N LI + +++ +A + F ++ GL PD +Y+ I L K+GR ++A
Sbjct: 180 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALL 239
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M++ GC PD + N ++ L ++ R +EA ++ + +G S
Sbjct: 240 MLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCS 285
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/498 (27%), Positives = 249/498 (50%), Gaps = 1/498 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+PS + ++ +LVK A +QM V +PD T +ILI+ C +G + +
Sbjct: 129 TPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFS 188
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++ ++ LGY PN T L+ G C V + + + + N+ + +L++G+
Sbjct: 189 VLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLC 248
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + A +LL +R ++ NT++ L + + +EA +M RG P+
Sbjct: 249 KIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVI 308
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L +L+ + + P TY +L++AL K G+ E L +
Sbjct: 309 TYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVM 368
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K+ + NV +Y+ ++D +C V + A +I M ++ P++ ++N +I+G CK V
Sbjct: 369 TKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSV 428
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ LL +L P+ T+NS+ID LC++ R ALD + E+ G P + ITY L
Sbjct: 429 DEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSL 488
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ LC ++ +++ LF KM+ I P+ YT+ ALI C+ +++ A+K F +L G
Sbjct: 489 LDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGC 548
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
D ++Y+ +I L K G DEA ME NGC PD+ T +I+ +L ++ ++A
Sbjct: 549 CIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEK 608
Query: 487 IVKTSKERG-ISFKSFPG 503
++ +G + F++F G
Sbjct: 609 LLHEMIAKGLLHFRNFHG 626
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 204/474 (43%), Gaps = 26/474 (5%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P+ T +ILI+ + +G + + ++ ++ LGY PN T T L+ G R A ++
Sbjct: 9 PNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKG---ETRCA--IKL 63
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTL-----L 157
++++R+ P SL H + F + P +V + + +
Sbjct: 64 PRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFNGM 123
Query: 158 YRLSNNSMASEAAAIL----------------RKMGDRGYLPESSTFDYTVTCLVTGLDL 201
+ N E IL ++M +G P+ T + C +
Sbjct: 124 LLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQM 183
Query: 202 NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
+ +L +K G +P LM+ L G + + + V N SY +
Sbjct: 184 AFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTL 243
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
++ CK+ A ++ R + DR P++V +NT+I G CKD V++ + + G
Sbjct: 244 LNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGI 303
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
PD T++++I C A + A L+EM + P+ TY ILI +LC G + +
Sbjct: 304 FPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKN 363
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
L M + + P++ T++ L+ +C + ++ A++ F +M+ + P SY+ +I L
Sbjct: 364 LLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLC 423
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
K DEA M P++ T N +++ L + GR A D++K RG
Sbjct: 424 KGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRG 477
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 145/317 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P Y+ +I + + A+ +M++ PD +TY ILI +C+ G + EA
Sbjct: 302 GIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEA 361
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G PNV TY+ L+DG+C V ++ M + V P+ + +++G
Sbjct: 362 KNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMING 421
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A LL + + + + N+L+ L + + A +++++ RG +
Sbjct: 422 LCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPAD 481
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L +L++ + +RG++P TY L++ L K R +
Sbjct: 482 VITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQ 541
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
H+ +V +YN++I CK M+D A + +M D P+ VTF +I +
Sbjct: 542 HILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKD 601
Query: 305 EVHKTRELLVMLLECGF 321
E K +LL ++ G
Sbjct: 602 ENDKAEKLLHEMIAKGL 618
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 120/247 (48%)
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
R ++ + ++ K+ A + ++M + I P+LVT + LI+ C ++ +
Sbjct: 127 RNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFS 186
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+L +L+ G++P+ +++ LC + +L ++V G N ++Y L+
Sbjct: 187 FSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNG 246
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
LC IG+ +++L + ++ PD+ +N +I C+ + +A + M + G+ PD
Sbjct: 247 LCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPD 306
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+YS LI +G+ A M NPD YT ++++ L ++G+ +EA +++
Sbjct: 307 VITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLG 366
Query: 490 TSKERGI 496
+ G+
Sbjct: 367 VMTKEGV 373
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 110/248 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y+ ++D + A F M + P +YNI+I+G+C+ VDEA
Sbjct: 372 GVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEA 431
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+++M PN TY LIDG C + R+ +++ + R + T SL+ G
Sbjct: 432 MNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDG 491
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + KA L ++ ER K L+ L + A + + + +G +
Sbjct: 492 LCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCID 551
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L L+E + G P T+ +++ +L++ + + ++ L+
Sbjct: 552 VYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLH 611
Query: 245 HVFKDRLV 252
+ L+
Sbjct: 612 EMIAKGLL 619
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 107/301 (35%), Gaps = 59/301 (19%)
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA------ 304
+V N+ + +++I+C + M + + ++ PN +T TL+ G + A
Sbjct: 7 IVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIKLPRM 66
Query: 305 -EVHKTRELLVMLLECGFKPD-------------KFTFNSMIDCLCRAHRFEDALDCLSE 350
E TR L M L F F+S + DA+ +
Sbjct: 67 IEDRSTRPL--MWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDV--VHDAVSQFNG 122
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M+ P+ I + ++ SL + ++ L ++M+ I PD+ T + LI FC + +
Sbjct: 123 MLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQ 182
Query: 411 IEKAEKAFFSMLTLGLRPDNF-----------------------------------SYSA 435
+ + +L LG +P+ SY
Sbjct: 183 MAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGT 242
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
L+ L K G A + +E PD N I++ L + EA+D RG
Sbjct: 243 LLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRG 302
Query: 496 I 496
I
Sbjct: 303 I 303
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 161/569 (28%), Positives = 257/569 (45%), Gaps = 72/569 (12%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD--QCKPDRFTYNILIHGICRIGVV 61
LG P+ YN ++ L N A Q M D C PD +Y +I+G + G +
Sbjct: 156 LGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
D+A +M G PNV TY+ +I C A+ + + VL M + V PN T S+
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
VHG P +A L + + N+L+ L N +EA + M RG
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR---------------------- 219
PE +T+ + T L E G+LD ++ G+ P
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 220 -FS------------TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
FS TY ++ L K+GR + RY + +RL YN +I C
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
+ D+A E+ EM DR I + + FN++I HCK+ V ++ +L +++ G KPD
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T++++ID C A + ++A L+ MV G+ P+ +TYN LI C I + +L LF++M
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575
Query: 387 QADRISPDIYTFNALIQ-----------------------------------SFCRMNKI 411
++ +SPDI T+N ++Q C+ N
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLT 635
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
++A + F ++ L+ + +++ +I AL+K GR DEAK F ++ NG PD T +L+
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Query: 472 LETLVQQGRFEEAHDIVKTSKERGISFKS 500
E L++QG EE D+ + +E G + S
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANS 724
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 239/479 (49%), Gaps = 5/479 (1%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM--EGLGYAPNV 80
S+++D+ + Q+ C P+ F+YNIL+ G+C EAL L++ M +G P+V
Sbjct: 143 SDAMDIVLRRMTQLG---CIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDV 199
Query: 81 YTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIR 140
+YT +I+GF + + + M +R + PN T S++ + + KA E+L
Sbjct: 200 VSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTS 259
Query: 141 FMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLD 200
++ + N++++ ++ EA L+KM G P+ T++ + L
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
E + D+ KRG+KP +TY L++ G VE L+ + ++ + N +++
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
+I + K +D+A + +MR + + P+ VT+ T+I CK V +++
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
P +NS+I LC +++ A + + EM++ G+ +TI +N +I S C G V S
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
+LF M + PDI T++ LI +C K+++A K SM+++G++PD +Y+ LI
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
K R ++A F ME +G +PD T N+IL+ L Q R A ++ E G +
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLE 618
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/534 (24%), Positives = 237/534 (44%), Gaps = 41/534 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ Y+++I AL K+ ++D A M + P+ TYN ++HG C G EA
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +K+M G P+V TY L+D C R E ++ + M +R + P T +L+ G
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348
Query: 125 VFR---CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++ H +L++R V + L+ + +A + KM +G
Sbjct: 349 YATKGALVEMHGLLDLMVR---NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY---------- 231
P++ T+ + L + + + I + P Y L+ +L
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465
Query: 232 -------------------------KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
K GR +E ++ + + + + ++ +Y+ +ID +C
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
MD AT++ M + P+ VT+NTLI+G+CK + + L + G PD
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+N ++ L + R A + + E G TYNI++ LC +LR+FQ +
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ + TFN +I + ++ + ++A+ F ++ GL PD +YS + + LI+ G
Sbjct: 646 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLL 705
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+E FLSME+NGC +S N I+ L+Q+G A + E+ S ++
Sbjct: 706 EELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEA 759
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 234/485 (48%), Gaps = 9/485 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN+++D L K+ A F M+ KP+ TY L+ G G + E
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G PN Y ++ILI + +V + V M+++ + P+ T +++ G
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI-G 417
Query: 125 VF----RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ R D + FE +I + +V N+L++ L +A ++ +M DRG
Sbjct: 418 ILCKSGRVEDAMRYFEQMI---DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
++ F+ + + E+ + D ++ GVKP TY L++ AG+ E
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L + + + +YN +I+ +CK++ M+ A + REM ++P+++T+N ++ G
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ +EL V + E G + + T+N ++ LC+ + ++AL + + T
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
T+NI+I +L +G + LF + A+ + PD+ T++ + ++ +E+ + F S
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G ++ +++++ L++ G A +++ + ++ T++L L+ L+ G+
Sbjct: 715 MEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD-LLSGGK 773
Query: 481 FEEAH 485
++E H
Sbjct: 774 YQEYH 778
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 137/525 (26%), Positives = 259/525 (49%), Gaps = 35/525 (6%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ ++ A+ K N D+ +QM + +TY+ILI+ CR + AL +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF- 126
+ +M LGY PN+ T + L++G+C++KR++E +++ M PN T +L+HG+F
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 127 ----------------------------------RCLDPHKAFELLIRFMEREPLTQKLV 152
+ D AF LL + + + L+
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
NT++ L +A + ++M +G P T+ ++CL ++ +L I
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+R + P T+ L++A K G+ VE ++ + + K + ++ +Y+ +I+ FC + +D
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A ++ M + P++VT+NTLI G CK V + E+ + + G + T+N +I
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
L +A + A + EMV GVPPN +TYN L+ LC G + +++ +F+ +Q ++
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
P IYT+N +I+ C+ K+E F ++ G++PD +Y+ +I + G +EA
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
F M+++G P+S N ++ ++ G E + +++K + G +
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 603
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/505 (25%), Positives = 241/505 (47%), Gaps = 35/505 (6%)
Query: 26 IDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTI 85
+D A F +M + P ++ L+ I ++ D + L +QM+ LG N YTY+I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
LI+ FC ++ VL M + PN T+ SL++G +A L+ +
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCL---------- 195
+ NTL++ L ++ ASEA A++ +M +G P+ T+ V L
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 196 ---------------------VTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
+ GL +++ + +G++P TY L+ L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
GR + R L+ + + ++ +V +++ +ID F K + A ++ EM R I P++
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
VT+++LI+G C + + +++ ++ PD T+N++I C+ R E+ ++ E
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M + G+ NT+TYNILI+ L GD + +F++M +D + P+I T+N L+ C+ K
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+EKA F + + P ++Y+ +I+ + K+G+ ++ F ++ G PD N
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 471 ILETLVQQGRFEEAHDIVKTSKERG 495
++ ++G EEA + K KE G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDG 566
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 164/363 (45%)
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A L ++ P + + LL ++ + ++ +M + G T+ +
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
C L +L +K G +P T L+ + R E ++ +F
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
N ++N +I N A + M + P+LVT+ +++G CK + LL
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ + +P +N++ID LC+ +DAL+ EM G+ PN +TY+ LI LC
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G + + RL M +I+PD++TF+ALI +F + K+ +AEK + M+ + P +Y
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
S+LI R DEAKQ F M C PD T N +++ + R EE ++ + +
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424
Query: 494 RGI 496
RG+
Sbjct: 425 RGL 427
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 164/416 (39%), Gaps = 72/416 (17%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y V++ L K DLA+ +M + +P YN +I G+C+ +D+A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L K+ME G PNV TY+ LI CN R ++ R+L M ER + P+ T +L+
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 125 -----------------VFRCLDPH--------KAFELLIRFMEREPLTQKLVC------ 153
V R +DP F + R E + + + +V
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 154 ----NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
NTL+ E + R+M RG + + T++ + L D + I
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGR-------------------------DVEG----- 239
+ GV P TY L++ L K G+ +EG
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Query: 240 ------DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
D + N K + +V +YN +I FC+ + A + +EM++ PN +
Sbjct: 516 KVEDGWDLFCNLSLKG-VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 574
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
NTLI +D + + EL+ + CGF D T + + L + LD LS
Sbjct: 575 NTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 630
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%)
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+D A + EM P+++ F+ L+S K + L + G + +T++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I+C CR + AL L +M++ G PN +T + L+ C ++ ++ L +M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
P+ TFN LI NK +A M+ G +PD +Y ++ L K G D A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
MEQ P N I++ L + ++A ++ K + +GI
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 72/156 (46%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ +DA+ EMV+ P+ I ++ L+ ++ + + L ++MQ I + YT++
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI FCR +++ A M+ LG P+ + S+L+ S R EA M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G P++ T N ++ L + EA ++ +G
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P YN +I + S + A F++M D P+ YN LI R G
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 586
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID 88
+ + L+K+M G+A + T ++ +
Sbjct: 587 REASAELIKEMRSCGFAGDASTIGLVTN 614
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 161/569 (28%), Positives = 257/569 (45%), Gaps = 72/569 (12%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD--QCKPDRFTYNILIHGICRIGVV 61
LG P+ YN ++ L N A Q M D C PD +Y +I+G + G +
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
D+A +M G PNV TY+ +I C A+ + + VL M + V PN T S+
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
VHG P +A L + + N+L+ L N +EA + M RG
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR---------------------- 219
PE +T+ + T L E G+LD ++ G+ P
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 220 -FS------------TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
FS TY ++ L K+GR + RY + +RL YN +I C
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
+ D+A E+ EM DR I + + FN++I HCK+ V ++ +L +++ G KPD
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T++++ID C A + ++A L+ MV G+ P+ +TYN LI C I + +L LF++M
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575
Query: 387 QADRISPDIYTFNALIQ-----------------------------------SFCRMNKI 411
++ +SPDI T+N ++Q C+ N
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLT 635
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
++A + F ++ L+ + +++ +I AL+K GR DEAK F ++ NG PD T +L+
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Query: 472 LETLVQQGRFEEAHDIVKTSKERGISFKS 500
E L++QG EE D+ + +E G + S
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANS 724
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 239/479 (49%), Gaps = 5/479 (1%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM--EGLGYAPNV 80
S+++D+ + Q+ C P+ F+YNIL+ G+C EAL L++ M +G P+V
Sbjct: 143 SDAMDIVLRRMTQLG---CIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDV 199
Query: 81 YTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIR 140
+YT +I+GF + + + M +R + PN T S++ + + KA E+L
Sbjct: 200 VSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTS 259
Query: 141 FMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLD 200
++ + N++++ ++ EA L+KM G P+ T++ + L
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
E + D+ KRG+KP +TY L++ G VE L+ + ++ + N +++
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
+I + K +D+A + +MR + + P+ VT+ T+I CK V +++
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
P +NS+I LC +++ A + + EM++ G+ +TI +N +I S C G V S
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
+LF M + PDI T++ LI +C K+++A K SM+++G++PD +Y+ LI
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
K R ++A F ME +G +PD T N+IL+ L Q R A ++ E G +
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLE 618
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/518 (25%), Positives = 231/518 (44%), Gaps = 41/518 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ Y+++I AL K+ ++D A M + P+ TYN ++HG C G EA
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +K+M G P+V TY L+D C R E ++ + M +R + P T +L+ G
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348
Query: 125 VFR---CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++ H +L++R V + L+ + +A + KM +G
Sbjct: 349 YATKGALVEMHGLLDLMVR---NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY---------- 231
P++ T+ + L + + + I + P Y L+ +L
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465
Query: 232 -------------------------KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
K GR +E ++ + + + + ++ +Y+ +ID +C
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
MD AT++ M + P+ VT+NTLI+G+CK + + L + G PD
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+N ++ L + R A + + E G TYNI++ LC +LR+FQ +
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ + TFN +I + ++ + ++A+ F ++ GL PD +YS + + LI+ G
Sbjct: 646 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLL 705
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+E FLSME+NGC +S N I+ L+Q+G A
Sbjct: 706 EELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 236/489 (48%), Gaps = 9/489 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN+++D L K+ A F M+ KP+ TY L+ G G + E
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G PN Y ++ILI + +V + V M+++ + P+ T +++ G
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI-G 417
Query: 125 VF----RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ R D + FE +I + +V N+L++ L +A ++ +M DRG
Sbjct: 418 ILCKSGRVEDAMRYFEQMI---DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
++ F+ + + E+ + D ++ GVKP TY L++ AG+ E
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L + + + +YN +I+ +CK++ M+ A + REM ++P+++T+N ++ G
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ +EL V + E G + + T+N ++ LC+ + ++AL + + T
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
T+NI+I +L +G + LF + A+ + PD+ T++ + ++ +E+ + F S
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G ++ +++++ L++ G A +++ + ++ T++L L+ L+ G+
Sbjct: 715 MEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD-LLSGGK 773
Query: 481 FEEAHDIVK 489
++E H ++
Sbjct: 774 YQEYHSCIR 782
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 174/348 (50%), Gaps = 12/348 (3%)
Query: 160 LSNNSMASEAAAILR-----KMGDRGYLPESSTFDYTV-TCLVTG-LDLNETCGILDTFI 212
L++ + S AAA+ R + G P T+ + +C G LDL L I
Sbjct: 61 LADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAA--LGNVI 118
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
K+G + + L++ L R + D L + + + NV SYN+++ C N
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178
Query: 272 DRATEICREMRD--RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
A E+ + M D D P++V++ T+I+G K+ ++ K +L+ G P+ T++
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYS 238
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
S+I LC+A + A++ L+ MV+ GV PN TYN ++ C+ G ++ +KM +D
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD 298
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ PD+ T+N+L+ C+ + +A K F SM GL+P+ +Y L++ G E
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M +NG +P+ Y ++++ +QG+ ++A + +++G++
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 161/569 (28%), Positives = 257/569 (45%), Gaps = 72/569 (12%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD--QCKPDRFTYNILIHGICRIGVV 61
LG P+ YN ++ L N A Q M D C PD +Y +I+G + G +
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
D+A +M G PNV TY+ +I C A+ + + VL M + V PN T S+
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
VHG P +A L + + N+L+ L N +EA + M RG
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR---------------------- 219
PE +T+ + T L E G+LD ++ G+ P
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 220 -FS------------TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
FS TY ++ L K+GR + RY + +RL YN +I C
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
+ D+A E+ EM DR I + + FN++I HCK+ V ++ +L +++ G KPD
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T++++ID C A + ++A L+ MV G+ P+ +TYN LI C I + +L LF++M
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575
Query: 387 QADRISPDIYTFNALIQ-----------------------------------SFCRMNKI 411
++ +SPDI T+N ++Q C+ N
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLT 635
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
++A + F ++ L+ + +++ +I AL+K GR DEAK F ++ NG PD T +L+
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Query: 472 LETLVQQGRFEEAHDIVKTSKERGISFKS 500
E L++QG EE D+ + +E G + S
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANS 724
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 239/479 (49%), Gaps = 5/479 (1%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM--EGLGYAPNV 80
S+++D+ + Q+ C P+ F+YNIL+ G+C EAL L++ M +G P+V
Sbjct: 143 SDAMDIVLRRMTQLG---CIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDV 199
Query: 81 YTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIR 140
+YT +I+GF + + + M +R + PN T S++ + + KA E+L
Sbjct: 200 VSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTS 259
Query: 141 FMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLD 200
++ + N++++ ++ EA L+KM G P+ T++ + L
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
E + D+ KRG+KP +TY L++ G VE L+ + ++ + N +++
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
+I + K +D+A + +MR + + P+ VT+ T+I CK V +++
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
P +NS+I LC +++ A + + EM++ G+ +TI +N +I S C G V S
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
+LF M + PDI T++ LI +C K+++A K SM+++G++PD +Y+ LI
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
K R ++A F ME +G +PD T N+IL+ L Q R A ++ E G +
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLE 618
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/534 (24%), Positives = 237/534 (44%), Gaps = 41/534 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ Y+++I AL K+ ++D A M + P+ TYN ++HG C G EA
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +K+M G P+V TY L+D C R E ++ + M +R + P T +L+ G
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348
Query: 125 VFR---CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++ H +L++R V + L+ + +A + KM +G
Sbjct: 349 YATKGALVEMHGLLDLMVR---NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY---------- 231
P++ T+ + L + + + I + P Y L+ +L
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465
Query: 232 -------------------------KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
K GR +E ++ + + + + ++ +Y+ +ID +C
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
MD AT++ M + P+ VT+NTLI+G+CK + + L + G PD
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+N ++ L + R A + + E G TYNI++ LC +LR+FQ +
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ + TFN +I + ++ + ++A+ F ++ GL PD +YS + + LI+ G
Sbjct: 646 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLL 705
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+E FLSME+NGC +S N I+ L+Q+G A + E+ S ++
Sbjct: 706 EELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEA 759
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 234/485 (48%), Gaps = 9/485 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN+++D L K+ A F M+ KP+ TY L+ G G + E
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G PN Y ++ILI + +V + V M+++ + P+ T +++ G
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI-G 417
Query: 125 VF----RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ R D + FE +I + +V N+L++ L +A ++ +M DRG
Sbjct: 418 ILCKSGRVEDAMRYFEQMI---DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
++ F+ + + E+ + D ++ GVKP TY L++ AG+ E
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L + + + +YN +I+ +CK++ M+ A + REM ++P+++T+N ++ G
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ +EL V + E G + + T+N ++ LC+ + ++AL + + T
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
T+NI+I +L +G + LF + A+ + PD+ T++ + ++ +E+ + F S
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G ++ +++++ L++ G A +++ + ++ T++L L+ L+ G+
Sbjct: 715 MEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD-LLSGGK 773
Query: 481 FEEAH 485
++E H
Sbjct: 774 YQEYH 778
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 174/348 (50%), Gaps = 12/348 (3%)
Query: 160 LSNNSMASEAAAILR-----KMGDRGYLPESSTFDYTV-TCLVTG-LDLNETCGILDTFI 212
L++ + S AAA+ R + G P T+ + +C G LDL L I
Sbjct: 61 LADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAA--LGNVI 118
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
K+G + + L++ L R + D L + + + NV SYN+++ C N
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178
Query: 272 DRATEICREMRD--RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
A E+ + M D D P++V++ T+I+G K+ ++ K +L+ G P+ T++
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYS 238
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
S+I LC+A + A++ L+ MV+ GV PN TYN ++ C+ G ++ +KM +D
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD 298
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ PD+ T+N+L+ C+ + +A K F SM GL+P+ +Y L++ G E
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M +NG +P+ Y ++++ +QG+ ++A + +++G++
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 242/506 (47%), Gaps = 7/506 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S GI P +N VIDAL ++ A L ++MS PD T+ L+ G G
Sbjct: 187 MSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGS 246
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
++ ALRL +M +G +P T +LI+G+C RV + ++ P+ T +
Sbjct: 247 IEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFST 306
Query: 121 LVHGVFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
V+G+ C + H A ++L ++ +T++ L NN EA I+ +M D
Sbjct: 307 FVNGL--CQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVD 364
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G LP+++TF+ + L T L E + +G+ P T+ +L+ AL K G
Sbjct: 365 SGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHL 424
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
R + + +YN++ID C + +A ++ +EM + VT+NT+I
Sbjct: 425 AVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIID 484
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G CK + + E+ + G + TFN++ID LC A R +DA + + +M+ G+ P
Sbjct: 485 GLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQP 544
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N +TYN ++ C G+++++ + Q M A+ D+ T+ LI C+ + + A K
Sbjct: 545 NNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLL 604
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M G++P +Y+ +I++L + +A F M + G PD++T ++ L +
Sbjct: 605 RGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRG 664
Query: 479 GR-FEEAHDIVKTSKERGI--SFKSF 501
G +EA D + + G F SF
Sbjct: 665 GGPIKEAFDFLVEMADNGFIPEFSSF 690
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 224/496 (45%), Gaps = 35/496 (7%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ G+ +T +YN ++ L + + I L + +MS +PD T+N +I +CR
Sbjct: 152 LDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQ 211
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
A+ ++++M AP+ T+T L++GF + R+ M E P TV
Sbjct: 212 ARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNV 271
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L++G + L R V + L Y I +++ D G
Sbjct: 272 LINGYCK----------LGR-----------VGDALGY-------------IQQEIAD-G 296
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ P+ TF V L ++ +L ++ G +P TY ++ L G E
Sbjct: 297 FEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAK 356
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+N + + + ++N +I C N ++ A ++ RE+ + ++PN+ TFN LI+
Sbjct: 357 GIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINAL 416
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK + H L + G PD+ T+N +ID LC + + ALD L EM G P +T
Sbjct: 417 CKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQST 476
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TYN +I LC + + +F +M I + TFN LI C +I+ A +
Sbjct: 477 VTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQ 536
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M++ GL+P+N +Y++++ K G +A +M NG D T ++ L + R
Sbjct: 537 MISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARR 596
Query: 481 FEEAHDIVKTSKERGI 496
+ A +++ + +G+
Sbjct: 597 TQAALKLLRGMRMKGM 612
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 179/406 (44%), Gaps = 1/406 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P ++ ++ L ++ +D A M + C+PD +TY+ +I+ +C G ++EA
Sbjct: 296 GFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEA 355
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+V QM G P+ T+ LI C ++ E + + + + PN T L++
Sbjct: 356 KGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINA 415
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + DPH A L ++ N L+ L ++ ++A +L++M G
Sbjct: 416 LCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQS 475
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + L + E + D G+ T+ L++ L A R + ++
Sbjct: 476 TVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVD 535
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L N +YN ++ +CK + +A +I + M ++VT+ TLI+G CK
Sbjct: 536 QMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKAR 595
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+LL + G KP +N +I L R + DAL EM E G PP+ TY
Sbjct: 596 RTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYK 655
Query: 365 ILIRSLC-AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
I+ R LC G + + +M + P+ +F L + +
Sbjct: 656 IVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLG 701
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 118/245 (48%)
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+N YN ++ + + + EM + I P++VTFNT+I C+ + +
Sbjct: 159 ANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLM 218
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L + C PD+ TF ++++ E AL + M E G P ++T N+LI C
Sbjct: 219 LEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCK 278
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
+G V +L Q+ AD PD TF+ + C+ ++ A K ML G PD ++
Sbjct: 279 LGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYT 338
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
YS +I L +G +EAK M +GC PD+ T N ++ L + + EEA D+ +
Sbjct: 339 YSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELT 398
Query: 493 ERGIS 497
+G+S
Sbjct: 399 VKGLS 403
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 143/498 (28%), Positives = 235/498 (47%), Gaps = 36/498 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP YN +++A + + A +M D P + TYN L+ R+G + +A
Sbjct: 238 GLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQA 297
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVH 123
++V+ M G+ P++ TY +L G C A +V E FR+ + M+ P+ T +LV
Sbjct: 298 TKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVD 357
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
F+ +R S S+A +L +M D+G P
Sbjct: 358 ACFK------------------------------WRCS-----SDALRLLEEMRDKGVKP 382
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T + V L L E G L+ + G+ P TY L++A KAG + +
Sbjct: 383 TLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLM 442
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + L + + N V+ CK+ + A E+ R P+ V++ T+++ + K+
Sbjct: 443 DEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKE 502
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
L ++E P T+N++I LCR R ++A+D L+E VE G+ P+ TY
Sbjct: 503 YNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTY 562
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI+I + C GD+ + R KM + PD+ T N L+ C K++KA K F S +
Sbjct: 563 NIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVE 622
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G + D +Y+ LI+++ K G D A F ME G PD++T N++L L + GR EE
Sbjct: 623 KGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEE 682
Query: 484 AHDIVKTSKERGISFKSF 501
AH+++ + G +SF
Sbjct: 683 AHNMLHKLADSGKLSQSF 700
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/513 (24%), Positives = 230/513 (44%), Gaps = 37/513 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P+ YN ++ A + I A + M+ +PD TYN+L G+C+ G VDEA
Sbjct: 273 GIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEA 332
Query: 65 LRLVKQMEGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
RL +ME LG A P+V TY L+D + ++ R+LE M+++ V P T +V
Sbjct: 333 FRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVK 392
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +A L + E + NTL+ ++A ++ +M +G
Sbjct: 393 SLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKM 452
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ T + + L + +L + +RG P +Y +M A +K R
Sbjct: 453 DTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLW 512
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + +L+ ++++YN +I C++ + A + E ++ + P+ T+N +I +CK+
Sbjct: 513 DQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKE 572
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ ++E FKPD T N++++ LC + + AL VE G + ITY
Sbjct: 573 GDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITY 632
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI+S+C +GDV +L F M+ + PD +T+N ++ + + E+A +
Sbjct: 633 NTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692
Query: 424 LG----------LRP------------------------DNF--SYSALIKALIKSGRFD 447
G L+P DN +Y + L G+
Sbjct: 693 SGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLK 752
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
EAK M Q G D T ++E L+++ +
Sbjct: 753 EAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQK 785
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 167/358 (46%), Gaps = 4/358 (1%)
Query: 131 PHKAFELLIRFMEREPLTQKL-VCNTLLYRLSNN--SMASEAAAILRKMGDRGYLPESST 187
PH A +LL R + L N +L LS + ++ + + R + + P T
Sbjct: 151 PHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYT 210
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
F+ V + L + L T G+ P TY L+ A + G E L +
Sbjct: 211 FNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 270
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+D + +YN ++ F ++ + +AT++ M P+L T+N L G C+ +V
Sbjct: 271 RDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVD 330
Query: 308 KTRELLVMLLECGFK-PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ L + G PD T+N+++D + DAL L EM + GV P +T+NI+
Sbjct: 331 EAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIV 390
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
++SLC G + +L +K+ + ++PD+ T+N LI ++C+ + KA M+ GL
Sbjct: 391 VKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGL 450
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ D F+ + ++ L K R+++A++ S Q G PD + ++ ++ E A
Sbjct: 451 KMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPA 508
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 119/242 (49%), Gaps = 4/242 (1%)
Query: 259 NMVIDCFCKVNMMDRATEICREMRDR-DIAPNLVTFNTLISGHCKDAEVHKTRELLVM-- 315
+ + + ++ + A ++ +R R + P+L N ++S + L V
Sbjct: 139 DAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRS 198
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
L+E P+ +TFN ++ C DAL LS M +G+ P+ +TYN L+ + C G
Sbjct: 199 LIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGM 258
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+ + L +M+ D I+P T+N L+ +F R+ I++A K SM G PD +Y+
Sbjct: 259 LGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNV 318
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCN-PDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
L L ++G+ DEA + ME+ G PD T N +++ + +A +++ +++
Sbjct: 319 LAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDK 378
Query: 495 GI 496
G+
Sbjct: 379 GV 380
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Query: 391 ISPDIYTFNALIQSFCRMNKI--EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ P + NA++ + R + + F S++ L L P++++++ L+ G +
Sbjct: 167 VRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLAD 226
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
A T +M+ G +PD+ T N +L ++G EA ++ K GI+
Sbjct: 227 ALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIA 275
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 161/569 (28%), Positives = 257/569 (45%), Gaps = 72/569 (12%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD--QCKPDRFTYNILIHGICRIGVV 61
LG P+ YN ++ L N A Q M D C PD +Y +I+G + G +
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
D+A +M G PNV TY+ +I C A+ + + VL M + V PN T S+
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
VHG P +A L + + N+L+ L N +EA + M RG
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR---------------------- 219
PE +T+ + T L E G+LD ++ G+ P
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 220 -FS------------TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
FS TY ++ L K+GR + RY + +RL YN +I C
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
+ D+A E+ EM DR I + + FN++I HCK+ V ++ +L +++ G KPD
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T++++ID C A + ++A L+ MV G+ P+ +TYN LI C I + +L LF++M
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575
Query: 387 QADRISPDIYTFNALIQ-----------------------------------SFCRMNKI 411
++ +SPDI T+N ++Q C+ N
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLT 635
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
++A + F ++ L+ + +++ +I AL+K GR DEAK F ++ NG PD T +L+
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Query: 472 LETLVQQGRFEEAHDIVKTSKERGISFKS 500
E L++QG EE D+ + +E G + S
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANS 724
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 239/479 (49%), Gaps = 5/479 (1%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM--EGLGYAPNV 80
S+++D+ + Q+ C P+ F+YNIL+ G+C EAL L++ M +G P+V
Sbjct: 143 SDAMDIVLRRMTQLG---CIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDV 199
Query: 81 YTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIR 140
+YT +I+GF + + + M +R + PN T S++ + + KA E+L
Sbjct: 200 VSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTS 259
Query: 141 FMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLD 200
++ + N++++ ++ EA L+KM G P+ T++ + L
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
E + D+ KRG+KP +TY L++ G VE L+ + ++ + N +++
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
+I + K +D+A + +MR + + P+ VT+ T+I CK V +++
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
P +NS+I LC +++ A + + EM++ G+ +TI +N +I S C G V S
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
+LF M + PDI T++ LI +C K+++A K SM+++G++PD +Y+ LI
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
K R ++A F ME +G +PD T N+IL+ L Q R A ++ E G +
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLE 618
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 131/518 (25%), Positives = 231/518 (44%), Gaps = 41/518 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ Y+++I AL K+ ++D A M + P+ TYN ++HG C G EA
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +K+M G P+V TY L+D C R E ++ + M +R + P T +L+ G
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348
Query: 125 VFR---CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++ H +L++R V + L+ + +A + KM +G
Sbjct: 349 YATKGALVEMHGLLDLMVR---NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY---------- 231
P++ T+ + L + + + I + P Y L+ +L
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465
Query: 232 -------------------------KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
K GR +E ++ + + + + ++ +Y+ +ID +C
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
MD AT++ M + P+ VT+NTLI+G+CK + + L + G PD
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+N ++ L + R A + + E G TYNI++ LC +LR+FQ +
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ + TFN +I + ++ + ++A+ F ++ GL PD +YS + + LI+ G
Sbjct: 646 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLL 705
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+E FLSME+NGC +S N I+ L+Q+G A
Sbjct: 706 EELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 236/489 (48%), Gaps = 9/489 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN+++D L K+ A F M+ KP+ TY L+ G G + E
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G PN Y ++ILI + +V + V M+++ + P+ T +++ G
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI-G 417
Query: 125 VF----RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ R D + FE +I + +V N+L++ L +A ++ +M DRG
Sbjct: 418 ILCKSGRVEDAMRYFEQMI---DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
++ F+ + + E+ + D ++ GVKP TY L++ AG+ E
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L + + + +YN +I+ +CK++ M+ A + REM ++P+++T+N ++ G
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ +EL V + E G + + T+N ++ LC+ + ++AL + + T
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
T+NI+I +L +G + LF + A+ + PD+ T++ + ++ +E+ + F S
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G ++ +++++ L++ G A +++ + ++ T++L L+ L+ G+
Sbjct: 715 MEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD-LLSGGK 773
Query: 481 FEEAHDIVK 489
++E H ++
Sbjct: 774 YQEYHSCIR 782
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 174/348 (50%), Gaps = 12/348 (3%)
Query: 160 LSNNSMASEAAAILR-----KMGDRGYLPESSTFDYTV-TCLVTG-LDLNETCGILDTFI 212
L++ + S AAA+ R + G P T+ + +C G LDL L I
Sbjct: 61 LADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAA--LGNVI 118
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
K+G + + L++ L R + D L + + + NV SYN+++ C N
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178
Query: 272 DRATEICREMRD--RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
A E+ + M D D P++V++ T+I+G K+ ++ K +L+ G P+ T++
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYS 238
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
S+I LC+A + A++ L+ MV+ GV PN TYN ++ C+ G ++ +KM +D
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD 298
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ PD+ T+N+L+ C+ + +A K F SM GL+P+ +Y L++ G E
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M +NG +P+ Y ++++ +QG+ ++A + +++G++
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 141/484 (29%), Positives = 222/484 (45%), Gaps = 35/484 (7%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN +++ LV N + L + +M KPD T+NILI +CR + A+ ++++M
Sbjct: 179 YNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMG 238
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G +P+ T+T L+ GF + R+ E M + TV LVHG +
Sbjct: 239 SYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCK----- 293
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
E + + +M + G+ P+ TF+ V
Sbjct: 294 ------------------------------EGRIEEVLSFIDEMSNEGFRPDRFTFNSLV 323
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L + ILD ++ G P TY L+ L K G E LN +
Sbjct: 324 NGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFS 383
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
N +YN +I CK N ++ ATE+ R + + I P++ TFN+LI G C EL
Sbjct: 384 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMEL 443
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+ G PD+FT+N +ID LC R E+AL L EM G N +TYN LI C
Sbjct: 444 FEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCK 503
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
+ + +F +M+ IS ++ T+N LI C+ ++E+A + ML GL+PD F+
Sbjct: 504 NKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFT 563
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y++L+ ++G +A +M NGC PDS T ++ L + GR E A +++T +
Sbjct: 564 YNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQ 623
Query: 493 ERGI 496
+G+
Sbjct: 624 LKGM 627
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 231/469 (49%), Gaps = 2/469 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP + + ++ ++ +++ A +QM C T N+L+HG C+ G ++E
Sbjct: 241 GLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEV 300
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + +M G+ P+ +T+ L++G C V +L++M + P+ T SL+ G
Sbjct: 301 LSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFG 360
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + +A E+L + + R+ + NTL+ L + EA + R + +G LP+
Sbjct: 361 LCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 420
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + L + + + +G P TY +L+++L GR E L
Sbjct: 421 VCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLK 480
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ NV +YN +ID FCK ++ A EI EM + I+ N+VT+NTLI G CK+
Sbjct: 481 EMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNR 540
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V + +L+ +L G KPDKFT+NS++ CRA + A D + M G P+++TY
Sbjct: 541 RVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYG 600
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI L G V + RL + +Q + T+N +I++ R + +A + F M+
Sbjct: 601 TLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEK 660
Query: 425 GLRPDNFSYSALIKALIK-SGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
G PD +Y + + L G EA + M G PD ++S L+L
Sbjct: 661 GDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPD-FSSFLML 708
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 233/504 (46%), Gaps = 11/504 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +N +I AL +++ I A L ++M PD T+ L+ G G ++ A
Sbjct: 206 GIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGA 265
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LR+ +QM G + T +L+ G+C R+ EV ++ M P+ T SLV+G
Sbjct: 266 LRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNG 325
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R A E+L ++ N+L++ L EA IL +M R + P
Sbjct: 326 LCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPN 385
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ ++ L + E + +G+ P T+ L++ L R
Sbjct: 386 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTN----NHRLAM 441
Query: 245 HVFKDRLVSNVN----SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+F++ + +YNM+ID C ++ A + +EM + N+VT+NTLI G
Sbjct: 442 ELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGF 501
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ + + E+ + G + T+N++ID LC+ R E+A + +M+ G+ P+
Sbjct: 502 CKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDK 561
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
TYN L+ C GD+ ++ + Q M ++ PD T+ LI + ++E A + +
Sbjct: 562 FTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRT 621
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ-QG 479
+ G+ +Y+ +IKAL + R EA + F M + G PD+ T ++ L G
Sbjct: 622 VQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGG 681
Query: 480 RFEEAHDIVKTSKERGI--SFKSF 501
EA D + ++G F SF
Sbjct: 682 PIGEAVDFLVEMTDKGFLPDFSSF 705
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 204/455 (44%), Gaps = 34/455 (7%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P Y ++ + + G R++++M+ G T+ ILI+ + + E V
Sbjct: 103 PSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAV 162
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
++IM+E F L + N LL L +
Sbjct: 163 VDIMEEE-------------------------FGLKL---------DAFTYNFLLNVLVD 188
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+ + +M RG P+ +TF+ + L + +++ G+ P T
Sbjct: 189 GNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKT 248
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
+ LM+ + G R + S+ + N+++ +CK ++ EM
Sbjct: 249 FTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMS 308
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+ P+ TFN+L++G C+ V E+L ++L+ GF PD FT+NS+I LC+ E
Sbjct: 309 NEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVE 368
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+A++ L++M+ PNT+TYN LI +LC V + L + + + I PD+ TFN+LI
Sbjct: 369 EAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 428
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
Q C N A + F M T G PD F+Y+ LI +L GR +EA ME +GC+
Sbjct: 429 QGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCS 488
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ T N +++ + R EEA +I + +GIS
Sbjct: 489 RNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGIS 523
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/524 (25%), Positives = 228/524 (43%), Gaps = 71/524 (13%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS+ +Y V+ L K S Q+M C+ R T+ ILI + + DEA+ +
Sbjct: 103 PSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAV 162
Query: 68 VKQMEG-LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
V ME G + +TY L++ + ++ V V M R + P+ T
Sbjct: 163 VDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTT--------- 213
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
F +LI K +C R A ++ +MG G P+
Sbjct: 214 --------FNILI----------KALCRAHQIR--------PAILMMEEMGSYGLSPDEK 247
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
TF + + ++N I + + G T +L+ K GR E +++ +
Sbjct: 248 TFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEM 307
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ + ++N +++ C++ + A EI M P++ T+N+LI G CK EV
Sbjct: 308 SNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEV 367
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD-------------------- 346
+ E+L ++ F P+ T+N++I LC+ ++ E+A +
Sbjct: 368 EEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 427
Query: 347 ----CLS-----------EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
CL+ EM G P+ TYN+LI SLC+ G + +L L ++M++
Sbjct: 428 IQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGC 487
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
S ++ T+N LI FC+ +IE+AE+ F M G+ + +Y+ LI L K+ R +EA Q
Sbjct: 488 SRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQ 547
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
M G PD +T N +L + G ++A DIV+T G
Sbjct: 548 LMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNG 591
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 169/413 (40%), Gaps = 77/413 (18%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +N++I L +N+ LA F++M C PD FTYN+LI +C G ++EA
Sbjct: 416 GILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEA 475
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+K+ME G + NV TY LIDGFC KR+ E + + M+ + + N T +L+ G
Sbjct: 476 LSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDG 535
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
L N EAA ++ +M G P+
Sbjct: 536 -----------------------------------LCKNRRVEEAAQLMDQMLMEGLKPD 560
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ +T D+ + I+ T G +P TY L+ L KAGR R L
Sbjct: 561 KFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLR 620
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
V +V +YN VI + A + REM
Sbjct: 621 TVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREM----------------------- 657
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH-RFEDALDCLSEMVEWGVPPNTITY 363
+E G PD T+ + LC +A+D L EM + G P+ ++
Sbjct: 658 ------------MEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSF 705
Query: 364 NILIRSLCAIGDVARSLRLFQKM--QADRISPDIYTFNALIQSFCRMNKIEKA 414
+L LCA+ ++L ++ QA+ ++ ++I F ++ K + A
Sbjct: 706 LMLAEGLCALSMEDTLIKLVNRVMKQANFSDSEV----SMIMGFLKIRKFQDA 754
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICR-IG 59
+ G+ + + YN VI AL + A F++M PD TY ++ G+C G
Sbjct: 622 VQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGG 681
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL-EIMKERNVCPNEATV 118
+ EA+ + +M G+ P+ ++ +L +G C + +++ +MK+ N +E
Sbjct: 682 PIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQANFSDSEV-- 739
Query: 119 RSLVHGVFRCLDPHKAFELLIRFM-EREP 146
S++ G + A L R + REP
Sbjct: 740 -SMIMGFLKIRKFQDALATLGRILSSREP 767
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 137/525 (26%), Positives = 259/525 (49%), Gaps = 35/525 (6%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ ++ A+ K N D+ +QM + +TY+ILI+ CR + AL +
Sbjct: 693 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 752
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF- 126
+ +M LGY PN+ T + L++G+C++KR++E +++ M PN T +L+HG+F
Sbjct: 753 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 812
Query: 127 ----------------------------------RCLDPHKAFELLIRFMEREPLTQKLV 152
+ D AF LL + + + L+
Sbjct: 813 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 872
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
NT++ L +A + ++M +G P T+ ++CL ++ +L I
Sbjct: 873 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 932
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+R + P T+ L++A K G+ VE ++ + + K + ++ +Y+ +I+ FC + +D
Sbjct: 933 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 992
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A ++ M + P++VT+NTLI G CK V + E+ + + G + T+N +I
Sbjct: 993 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 1052
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
L +A + A + EMV GVPPN +TYN L+ LC G + +++ +F+ +Q ++
Sbjct: 1053 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 1112
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
P IYT+N +I+ C+ K+E F ++ G++PD +Y+ +I + G +EA
Sbjct: 1113 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 1172
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
F M+++G P+S N ++ ++ G E + +++K + G +
Sbjct: 1173 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 1217
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 224/474 (47%), Gaps = 39/474 (8%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYT 82
+++IDL F M + P +N L+ I ++ D + L K+ME LG ++YT
Sbjct: 170 NDAIDL----FSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 225
Query: 83 YTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFM 142
+ I+I+ FC +V+ +L M + P+ T+ SLV+G R
Sbjct: 226 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR--------------- 270
Query: 143 EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
+ S+A +++ KM + GY P+ ++ + L +N
Sbjct: 271 --------------------RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 310
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
+ ++G++P TY L+ L + R + R L+ + K ++ NV +Y+ ++
Sbjct: 311 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 370
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
D F K + A E+ EM I P++VT+++LI+G C + + ++ +++ G
Sbjct: 371 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 430
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
D ++N++I+ C+A R ED + EM + G+ NT+TYN LI+ GDV ++
Sbjct: 431 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 490
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
F +M ISPDI+T+N L+ C ++EKA F M + D +Y+ +I+ + K
Sbjct: 491 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 550
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+G+ +EA F S+ G PD T ++ L +G E + K+ G+
Sbjct: 551 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 604
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/548 (24%), Positives = 228/548 (41%), Gaps = 52/548 (9%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F GISP YN ++ L + ++ A + F+ M + D TY +I G+C+ G
Sbjct: 494 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 553
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR- 119
V+EA L + G P++ TYT ++ G C + EV + MK+ + N+ T+
Sbjct: 554 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD 613
Query: 120 -------SLVHGVFRC-------------------------------------------- 128
L+ + C
Sbjct: 614 GDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSE 673
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
L A L ++ P + + LL ++ + ++ +M + G T+
Sbjct: 674 LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 733
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ C L +L +K G +P T L+ + R E ++ +F
Sbjct: 734 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 793
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
N ++N +I N A + M + P+LVT+ +++G CK +
Sbjct: 794 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 853
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
LL + + +P +N++ID LC+ +DAL+ EM G+ PN +TY+ LI
Sbjct: 854 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 913
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
LC G + + RL M +I+PD++TF+ALI +F + K+ +AEK + M+ + P
Sbjct: 914 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 973
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+YS+LI R DEAKQ F M C PD T N +++ + R EE ++
Sbjct: 974 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 1033
Query: 489 KTSKERGI 496
+ +RG+
Sbjct: 1034 REMSQRGL 1041
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/536 (22%), Positives = 232/536 (43%), Gaps = 52/536 (9%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN +I+ K+ ++ F++MS + TYN LI G + G VD+A QM+
Sbjct: 436 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 495
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G +P+++TY IL+ G C+ + + + E M++R + + T +++ G+ +
Sbjct: 496 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 555
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF-DYT 191
+A+ L + + T++ L + E A+ KM G + T D
Sbjct: 556 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGD 615
Query: 192 VTCLVTGLDLNETCGILDTF---IKRGVKPRFSTYLLLM---------EALYKAG----R 235
+T + +CG + IK GV + + L E L + G +
Sbjct: 616 ITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELK 675
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
+ + K R ++ ++ ++ K+N D + +M++ I N T++
Sbjct: 676 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 735
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
LI+ C+ +++ +L +++ G++P+ T +S+++ C + R +A+ + +M G
Sbjct: 736 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795
Query: 356 VPPNTITYNILIR-----------------------------------SLCAIGDVARSL 380
PNT+T+N LI LC GD +
Sbjct: 796 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
L KM+ ++ P + +N +I C+ ++ A F M T G+RP+ +YS+LI L
Sbjct: 856 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 915
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
GR+ +A + M + NPD +T + +++ V++G+ EA + +R I
Sbjct: 916 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 971
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 209/446 (46%), Gaps = 10/446 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ A+VK D+ ++M V + D +T+NI+I+ C V AL +
Sbjct: 186 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 245
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P+ T L++GFC RV++ +++ M E P+ +++ + +
Sbjct: 246 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 305
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLPESS 186
+ AF+ + +ER+ + +V T L L N+S S+AA +L M + P
Sbjct: 306 TKRVNDAFDFF-KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 364
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + V + E + + ++ + P TY L+ L R E ++ + +
Sbjct: 365 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 424
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+++V SYN +I+ FCK ++ ++ REM R + N VT+NTLI G + +V
Sbjct: 425 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 484
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
K +E + G PD +T+N ++ LC E AL +M + + + +TY +
Sbjct: 485 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 544
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
IR +C G V + LF + + PDI T+ ++ C + + E + M GL
Sbjct: 545 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 604
Query: 427 RPDNFSYS--------ALIKALIKSG 444
++ + S LIK ++ G
Sbjct: 605 MKNDCTLSDGDITLSAELIKKMLSCG 630
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 132/280 (47%), Gaps = 35/280 (12%)
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+++ ++N+VI+CFC + A I +M P+ VT +L++G C+ V L
Sbjct: 221 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 280
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD-------------------------- 346
+ ++E G+KPD +N++ID LC+ R DA D
Sbjct: 281 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 340
Query: 347 ---------CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
LS+M++ + PN ITY+ L+ + G V + LF++M I PDI T
Sbjct: 341 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 400
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+++LI C ++I++A + F M++ G D SY+ LI K+ R ++ + F M
Sbjct: 401 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 460
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
Q G ++ T N +++ Q G ++A + GIS
Sbjct: 461 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 500
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 164/416 (39%), Gaps = 72/416 (17%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y V++ L K DLA+ +M + +P YN +I G+C+ +D+A
Sbjct: 830 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 889
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L K+ME G PNV TY+ LI CN R ++ R+L M ER + P+ T +L+
Sbjct: 890 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 949
Query: 125 -----------------VFRCLDPH--------KAFELLIRFMEREPLTQKLVC------ 153
V R +DP F + R E + + + +V
Sbjct: 950 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 1009
Query: 154 ----NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
NTL+ E + R+M RG + + T++ + L D + I
Sbjct: 1010 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 1069
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGR-------------------------DVEG----- 239
+ GV P TY L++ L K G+ +EG
Sbjct: 1070 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 1129
Query: 240 ------DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
D + N K + +V +YN +I FC+ + A + +EM++ PN +
Sbjct: 1130 KVEDGWDLFCNLSLKG-VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 1188
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
NTLI +D + + EL+ + CGF D T + + L + LD LS
Sbjct: 1189 NTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 1244
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%)
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
R + DA+D S+MV+ P+ + +N L+ ++ + + L +KM+ I D+Y
Sbjct: 165 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 224
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
TFN +I FC ++ A ML LG PD + +L+ + R +A M
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ G PD N I+++L + R +A D K + +GI
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI 324
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P YN +I + S + A F++M D P+ YN LI R G
Sbjct: 1141 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 1200
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID 88
+ + L+K+M G+A + T ++ +
Sbjct: 1201 REASAELIKEMRSCGFAGDASTIGLVTN 1228
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 237/489 (48%), Gaps = 1/489 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P Y VI A K + + +M +CKP+ FTYN I G+C+ G VDEAL
Sbjct: 238 IVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEAL 296
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ K M G P+ +TYT+L+DGFC KR E + E M + PN T +L+ G
Sbjct: 297 EVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGF 356
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ + +A + + R + N ++ ++ ++A ++ +M G P++
Sbjct: 357 IKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDT 416
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + + D+ + C +L R + P TY +L+ L + + + L+
Sbjct: 417 WTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQ 476
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++ + NV Y +I + + + + A E+ + M + P+L +N LI G C+ +
Sbjct: 477 MIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKK 536
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V + + LLV + E G KP+ T+ + I+ ++ + A +M+ G+ PN + Y I
Sbjct: 537 VEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTI 596
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI+ C +G+ +L F+ M + PDI ++A+I S + K ++A F L G
Sbjct: 597 LIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTG 656
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ PD F Y++LI K G ++A Q + M NG NP+ N ++ L + G +A
Sbjct: 657 VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAR 716
Query: 486 DIVKTSKER 494
++ +E+
Sbjct: 717 ELFDEIEEK 725
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 156/563 (27%), Positives = 254/563 (45%), Gaps = 71/563 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ Y A+ID +K +I+ A +M K + TYN +I GI + G + +A
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKA 400
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +M G P+ +TY +LIDG+ + +A+ +L MK R + P+ T L+ G
Sbjct: 401 MSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISG 460
Query: 125 VFRCLDPHKAFEL----------------------------------LIRFMEREPLTQK 150
+ D KA E+ L++ M +
Sbjct: 461 LCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD 520
Query: 151 LVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF--------------------- 188
L C N L+ L EA +L MG++G P + T+
Sbjct: 521 LFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFK 580
Query: 189 ----------DYTVTCLVTG-LDLNETCGILDTF---IKRGVKPRFSTYLLLMEALYKAG 234
+ T L+ G D+ T L TF +++G+ P Y ++ +L K G
Sbjct: 581 DMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNG 640
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
+ E K +V +V YN +I FCK +++A+++ EM I PN+V +N
Sbjct: 641 KTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYN 700
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
TLI+G CK EV K REL + E PD T++++ID C++ +A EM+
Sbjct: 701 TLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISK 760
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G+ P+ Y ILI G++ ++L LF + Q + + FN+LI SFC+ K+ +A
Sbjct: 761 GISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEA 819
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
+ F M+ L P+ +Y+ LI A K+ +EA+Q FL ME P++ T +L +
Sbjct: 820 RELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLS 879
Query: 475 LVQQGRFEEAHDIVKTSKERGIS 497
Q G + + K + RGI+
Sbjct: 880 YNQIGNRFKMISLFKDMEARGIA 902
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/501 (26%), Positives = 224/501 (44%), Gaps = 1/501 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++D K A L F+ M P+RFTY LI G + G ++EA
Sbjct: 306 GLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEA 365
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LR+ +M G NV TY +I G A +A+ + M + P+ T L+ G
Sbjct: 366 LRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDG 425
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D KA ELL R+ + L+ L ++S +A +L +M G P
Sbjct: 426 YLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPN 485
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + V +L I GV P Y L+ L +A + E L
Sbjct: 486 VFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLV 545
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + N ++Y I+ + K + A ++M I PN V + LI GHC
Sbjct: 546 DMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVG 605
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +LE G PD ++++I L + + ++A+ + ++ GV P+ YN
Sbjct: 606 NTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYN 665
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C GD+ ++ +L+ +M + I+P+I +N LI C++ ++ KA + F +
Sbjct: 666 SLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEK 725
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
L PD +YS +I KSG EA + F M G +PD Y ++++ ++G E+A
Sbjct: 726 DLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKA 785
Query: 485 HDIVKTSKERGI-SFKSFPGL 504
+ ++++ + S +F L
Sbjct: 786 LSLFHEAQQKSVGSLSAFNSL 806
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 140/533 (26%), Positives = 233/533 (43%), Gaps = 42/533 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P T YN +ID +KS+ + A +M + P FTY++LI G+C + +A
Sbjct: 411 GLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKA 470
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ QM G PNV+ Y LI + R +L+IM V P+ L+ G
Sbjct: 471 NEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIG 530
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R +A LL+ E+ + S + A + M G +P
Sbjct: 531 LCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPN 590
Query: 185 SSTFDYTVTCLVTG-LDLNETCGILDTF---IKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ + T L+ G D+ T L TF +++G+ P Y ++ +L K G+ E
Sbjct: 591 NVIY----TILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
K +V +V YN +I FCK +++A+++ EM I PN+V +NTLI+G
Sbjct: 647 GVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGL 706
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK EV K REL + E PD T++++ID C++ +A EM+ G+ P+
Sbjct: 707 CKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDG 766
Query: 361 ITY----------------------------------NILIRSLCAIGDVARSLRLFQKM 386
Y N LI S C G V + LF M
Sbjct: 767 YIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDM 826
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+++P+I T+ LI ++ + +E+AE+ F M T + P+ +Y++L+ + + G
Sbjct: 827 VDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNR 886
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
+ F ME G D+ ++ ++G+ EA ++ S GI +
Sbjct: 887 FKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLE 939
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/525 (23%), Positives = 221/525 (42%), Gaps = 34/525 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ +Y +I A V+ + ++A + M + PD F YN LI G+CR V+EA
Sbjct: 481 GVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEA 540
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G PN +TY I+ + + + R + M + PN L+ G
Sbjct: 541 KMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKG 600
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +E+ + + +++ LS N EA + K G +P+
Sbjct: 601 HCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPD 660
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ ++ D+ + + D + G+ P Y L+ L K G + +
Sbjct: 661 VFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFD 720
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN--------------- 289
+ + LV +V +Y+ +ID +CK + A ++ EM + I+P+
Sbjct: 721 EIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEG 780
Query: 290 -------------------LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
L FN+LI CK +V + REL +++ P+ T+
Sbjct: 781 NLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTI 840
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+ID +A E+A +M + PNT+TY L+ S IG+ + + LF+ M+A
Sbjct: 841 LIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARG 900
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
I+ D + + ++C+ K +A K L G++ ++ + ALI L K +
Sbjct: 901 IACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVL 960
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ M + + S T N +L + G +EA ++ + G
Sbjct: 961 ELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLG 1005
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 108/477 (22%), Positives = 190/477 (39%), Gaps = 38/477 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ Y A I+ KS I +A F+ M P+ Y ILI G C +G EA
Sbjct: 551 GIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEA 610
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L K M G P++ Y+ +I + E V + V P+ SL+ G
Sbjct: 611 LSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISG 670
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D KA +L + +V NTL+ L ++A + ++ ++ +P+
Sbjct: 671 FCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPD 730
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP-------------------------- 218
T+ + +L E + D I +G+ P
Sbjct: 731 VVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFH 790
Query: 219 --------RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
S + L+++ K G+ +E + + +L N+ +Y ++ID + K M
Sbjct: 791 EAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEM 850
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
M+ A ++ +M R+I PN +T+ +L+ + + K L + G D +
Sbjct: 851 MEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGV 910
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
M C+ + +AL L++ + G+ ++ LI LC ++ L L +M +
Sbjct: 911 MASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEE 970
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+S T N L+ F + ++A K M LG P + S + I +GR D
Sbjct: 971 LSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLS----LTDSISTGRDD 1023
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 125/236 (52%), Gaps = 3/236 (1%)
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV-MLLECGFKPDK 325
K NMM ++ M + I P++ T+ +I HCK +V K + +L M EC KP+
Sbjct: 219 KANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC--KPNL 276
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
FT+N+ I LC+ ++AL+ M+E G+ P+ TY +L+ C + +F+
Sbjct: 277 FTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFES 336
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M + ++P+ +T+ ALI F + IE+A + M+T GL+ + +Y+A+I + K+G
Sbjct: 337 MPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGE 396
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+A F M G PD++T NL+++ ++ +A +++ K R ++ F
Sbjct: 397 MAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPF 452
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C +H+ +L LL+ P + ++D L R +R E+G N
Sbjct: 131 CNSGLIHQADNMLEKLLQTRKPPLE-----ILDSLVRCYR------------EFG-GSNL 172
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
++I I +G + + +F ++ P + N L++ + N + K + S
Sbjct: 173 TVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGS 232
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ + PD ++Y+ +IKA K G + K ME+ C P+ +T N + L Q G
Sbjct: 233 MVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGA 291
Query: 481 FEEAHDIVKTSKERGIS 497
+EA ++ K E+G+
Sbjct: 292 VDEALEVKKLMMEKGLG 308
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 141/512 (27%), Positives = 237/512 (46%), Gaps = 19/512 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ + +I++ N + A+ ++ +PD T+ LI GIC G + EA
Sbjct: 91 GIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEA 150
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M G G+ P+V TY LI+G C + R+L M ++N PN +++
Sbjct: 151 LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDS 210
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF L + + N+L++ L N A +L +M D +P+
Sbjct: 211 LCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 270
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+F+ V L + E ++D I+RGV+P TY LM+ E + +
Sbjct: 271 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFD 330
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNM-------------------MDRATEICREMRDRD 285
+ + NV SYN +I+ +CK+ MD A ++ M +
Sbjct: 331 TMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKG 390
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
PN++++NTLI+G+CK + K L + PD T++++I LC R +DA+
Sbjct: 391 CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAI 450
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
EMV PN +TY IL+ LC +A ++ L + ++ + PDI N I
Sbjct: 451 ALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGM 510
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
CR ++E A F ++ + GL+PD ++YS +I L + G DEA + F M++NGC +
Sbjct: 511 CRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNG 570
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
N I ++ A +++ RG S
Sbjct: 571 CIYNTITRGFLRNNETSRAIQLLQEMVARGFS 602
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 128/518 (24%), Positives = 232/518 (44%), Gaps = 23/518 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P T + +I + I A F +M + +PD TY LI+G+C++G
Sbjct: 125 LGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSA 184
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+RL+ M PNV+ Y +ID C ++V E F + M + + P+ T SL+H
Sbjct: 185 AIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIH 244
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + LL ++ + + + NT++ L +EA ++ KM RG P
Sbjct: 245 ALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEP 304
Query: 184 ESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
T+ + CL++ +D E + DT + +G P +Y L+ K R +
Sbjct: 305 NVVTYTALMDGHCLLSEMD--EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIH 362
Query: 242 Y------------LNHVFK--DRLV-----SNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y ++ K D +V NV SYN +I+ +CK+ +D+A + EM
Sbjct: 363 YTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMC 422
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+++ P+ VT++TLI G C + L ++ C P+ T+ ++D LC+
Sbjct: 423 RQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLA 482
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+A+ L + + P+ NI I +C G++ + LF + + + PD++T++ +I
Sbjct: 483 EAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 542
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
CR +++A K F M G + Y+ + + +++ A Q M G +
Sbjct: 543 NGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFS 602
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
D+ T L ++ L G + I++ + +F S
Sbjct: 603 ADASTMTLFVKMLSDDGLDQSLKQILRNGCKWISTFDS 640
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 119/239 (49%)
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
+N ++ K+ + +M I PN+ T + LI+ C V +L +L
Sbjct: 64 FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
+ G +PD TF ++I +C + +AL +M+ G P+ +TY LI LC +G+ +
Sbjct: 124 KLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
++RL M P+++ +N +I S C+ ++ +A F M+T G+ PD F+Y++LI
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLI 243
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
AL + M + PD + N +++ L ++G+ EAHD+V +RG+
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGV 302
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P FN ++ + + L +M +G+PPN T +ILI S C + V + +
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
K+ PD TF LI+ C KI +A F M+ G RPD +Y LI L K
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G A + SM Q C P+ + N I+++L + + EA ++ +GIS
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGIS 233
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%)
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
+ A+ + M+ PP+T+ +N L+ S+ + + L L +M + I P+IYT +
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI SFC +N++ A +L LG +PD +++ LI+ + G+ EA F M G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161
Query: 461 CNPDSYTSNLILETLVQQGRFEEA 484
PD T ++ L + G A
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAA 185
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 135/502 (26%), Positives = 248/502 (49%), Gaps = 4/502 (0%)
Query: 3 FLGISP--STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG- 59
LGI P ++N ++ +LVK +QM + +P+ +T ILI+ +C
Sbjct: 60 LLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNR 119
Query: 60 -VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
V A + +M LG P T+ L++G C+ ++ + ++ + + + P+ T
Sbjct: 120 DHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITY 179
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
+++ G+ + A +LL + E+ + NT++ L + A+EA +M D
Sbjct: 180 TTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVD 239
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+G P T+ + LNE + I R V P T+ +L++ L K G +E
Sbjct: 240 QGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILE 299
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
R + ++ + + +Y+ ++D +C + MD A ++ M + AP++ +N LI+
Sbjct: 300 ARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILIN 359
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
GHCK +++ + LL + + PD T+++++ C+A R + A EM +G+ P
Sbjct: 360 GHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLP 419
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
++ITY+IL+ LC G + + RL + MQ +I P I +N LIQ C K+E A + F
Sbjct: 420 DSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELF 479
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
++ G++P +Y+ +I L+K G +EA + F M NGC P+S T N+ ++ ++
Sbjct: 480 SNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRN 539
Query: 479 GRFEEAHDIVKTSKERGISFKS 500
G A +++ RG S S
Sbjct: 540 GDPSNAVRLIEEMVGRGFSADS 561
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 206/470 (43%), Gaps = 35/470 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ + +++ L I A F ++ P TY +I G+C+IG
Sbjct: 135 LGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTN 194
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL+L+K+ME G P+V Y +ID C +R E M ++ + PN T S++H
Sbjct: 195 ALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILH 254
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G CN +EA ++ ++M R +P
Sbjct: 255 G---------------------------FCNL--------GQLNEATSLFKQMIGRNVMP 279
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF V L + E + + + GV+P TY LM+ + E +
Sbjct: 280 NTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLF 339
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +V YN++I+ CK ++ A + EM DRD+ P+ VT++TL+ G C+
Sbjct: 340 DIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQA 399
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++L + G PD T++ ++D LC+ ++A L M E + P+ Y
Sbjct: 400 GRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIY 459
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NILI+ +C G + + LF + I P + T+ +I + +A + F M+
Sbjct: 460 NILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVV 519
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
G P++ +Y+ I+ +++G A + M G + DS T ++L+
Sbjct: 520 NGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 181/405 (44%), Gaps = 6/405 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I +G +PS Y +I L K A ++M CKPD YN +I +C+
Sbjct: 167 IGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRR 226
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+EA+ +M G PNV TY+ ++ GFCN ++ E + + M RNV PN T
Sbjct: 227 ANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTI 286
Query: 121 LVHGVFR---CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
LV G+ + L+ + FE++ E + L+ S EA + M
Sbjct: 287 LVDGLCKEGMILEARRVFEMMT---ENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMV 343
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
+G+ P ++ + LNE +L R + P TY LM+ +AGR
Sbjct: 344 GKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQ 403
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ + L+ + +Y++++D CK +D A + + M++ I P++ +N LI
Sbjct: 404 VAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILI 463
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G C ++ REL L G +P T+ MI L + +A + +MV G
Sbjct: 464 QGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCL 523
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
PN+ TYN+ I+ GD + ++RL ++M S D TF L+
Sbjct: 524 PNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI PS Y +I L+K + A F++M V+ C P+ TYN+ I G R G A
Sbjct: 486 GIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNA 545
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
+RL+++M G G++ + T+ +L+D N + ++ R
Sbjct: 546 VRLIEEMVGRGFSADSSTFQMLLDLESNDEIISRFMR 582
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 135/493 (27%), Positives = 239/493 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ S N+++ LVK +DLA+ +Q++ + + +T NI+I+ +C+ ++
Sbjct: 57 GLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENT 116
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ME G P+V TY LI+ +C + E F +++ M + + P T ++++G
Sbjct: 117 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 176
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A +L ++ N LL N +A I +M +G +P+
Sbjct: 177 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 236
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+F + L L++ G+ P Y +L+ + G E + +
Sbjct: 237 LVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRD 296
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + V +V +YN +++ CK M+ A E+ EM +R + P+ TF TLI+G+ KD
Sbjct: 297 EMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDG 356
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++K L M+++ KPD T+N++ID C+ E + ++M+ + PN I+Y
Sbjct: 357 NMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYG 416
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
ILI C +G V+ + RL+ +M I T N +++ +CR KA++ +ML
Sbjct: 417 ILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK 476
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ PD +Y+ LI IK D A ME +G PD T N+IL +QGR +EA
Sbjct: 477 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 536
Query: 485 HDIVKTSKERGIS 497
I+ ERG++
Sbjct: 537 ELIMLKMIERGVN 549
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 223/463 (48%), Gaps = 6/463 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN +I+A + ++ A+ MS KP FTYN +I+G+C+ G A
Sbjct: 127 GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRA 186
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +M +G +P+ TY IL+ C + + R+ + M + V P+ + +L+
Sbjct: 187 KGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGL 246
Query: 125 VFR--CLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGY 181
+ + CLD + R M+ L V T+L N + SEA + +M ++G
Sbjct: 247 LSKNGCLDQALKY---FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGC 303
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+ + T++ + L L+E + +RGV P F T+ L+ K G +
Sbjct: 304 VLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVT 363
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + L +V +YN +ID FCK + M++ E+ +M R I PN +++ LI+G+C
Sbjct: 364 LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYC 423
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
V + L ++E GF+ T N+++ CRA A + LS M+ G+ P+ I
Sbjct: 424 NMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 483
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN LI ++ R+ L KM+ + PD+ T+N ++ F R ++++AE M
Sbjct: 484 TYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 543
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+ G+ PD +Y++LI + EA + M Q G PD
Sbjct: 544 IERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 220/495 (44%), Gaps = 8/495 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ + N +I+AL K+ I+ M PD TYN LI+ CR G+++EA
Sbjct: 92 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 151
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G G P V+TY +I+G C + VL+ M + + P+ AT L+
Sbjct: 152 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 211
Query: 125 VFR---CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRG 180
R +D + F+ M + + LV + L+ LS N +A R M + G
Sbjct: 212 CCRNDNMMDAERIFDE----MPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 267
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P++ + + ++E + D +++G TY ++ L K E D
Sbjct: 268 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 327
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + + ++ +I+ + K M++A + M R++ P++VT+NTLI G
Sbjct: 328 ELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 387
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK +E+ K EL ++ P+ ++ +I+ C +A EMVE G
Sbjct: 388 CKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATI 447
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
IT N +++ C G+ ++ M I PD T+N LI F + +++A
Sbjct: 448 ITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNK 507
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M GL PD +Y+ ++ + GR EA+ L M + G NPD T ++ V Q
Sbjct: 508 MENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNN 567
Query: 481 FEEAHDIVKTSKERG 495
+EA + +RG
Sbjct: 568 LKEAFRVHDEMLQRG 582
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 134/271 (49%)
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
LL+ +A + EG + L ++N+ N ++ KV +D A EI +E+
Sbjct: 32 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 91
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
+ N+ T N +I+ CK+ ++ T+ L + E G PD T+N++I+ CR E+A
Sbjct: 92 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 151
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
+ + M G+ P TYN +I LC G R+ + +M +SPD T+N L+
Sbjct: 152 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 211
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
CR + + AE+ F M + G+ PD S+SALI L K+G D+A + F M+ G PD
Sbjct: 212 CCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 271
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ +++ + G EA + E+G
Sbjct: 272 NVIYTILIGGFCRNGVMSEALKVRDEMLEQG 302
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 120/245 (48%)
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
SN +++++ + + + E R ++ + + ++ N+L+ G K V E+
Sbjct: 25 SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEI 84
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
++ G + + +T N MI+ LC+ + E+ LS+M E GV P+ +TYN LI + C
Sbjct: 85 YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR 144
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G + + L M + P ++T+NA+I C+ K +A+ ML +G+ PD +
Sbjct: 145 QGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 204
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y+ L+ ++ +A++ F M G PD + + ++ L + G ++A + K
Sbjct: 205 YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK 264
Query: 493 ERGIS 497
G++
Sbjct: 265 NAGLA 269
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 243/494 (49%), Gaps = 2/494 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGI P + +I+ + I +A + +M +PD +YN LI+G+C G +
Sbjct: 157 LGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNM 216
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ + K+ME G PNV TY +ID C + V + L M R + P+ T S+VH
Sbjct: 217 AVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVH 276
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ CL L + ME+ +V N ++ L + + ++AA L +M D+G
Sbjct: 277 GLC-CLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIP 335
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ T+ + L LNE + ++G KP Y ++++L K + +
Sbjct: 336 PDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEF 395
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L+ + + N +Y+ ++ FC + +D AT++ +EM R++ PN +TF+ L+ G C+
Sbjct: 396 LSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQ 455
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ V + R + + E G +P+ +T+N++++ C + +A MV G P+ +
Sbjct: 456 EGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHS 515
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YNILI C + ++ L +M +++P+ T+N +++ C + ++ A++ F M
Sbjct: 516 YNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMC 575
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ G+ P +YS L+ L K G DEA + F SM++ PD +++E + G+ E
Sbjct: 576 SSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLE 635
Query: 483 EAHDIVKTSKERGI 496
A + GI
Sbjct: 636 VAKGLFSKLSADGI 649
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 127/494 (25%), Positives = 238/494 (48%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ G++ + N +I+ L + N +D A + +M +PD T+ LI+G+C G
Sbjct: 119 MDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGK 178
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A+ L +M G+ P+V +Y LI+G CN+ V + M++ PN T +
Sbjct: 179 IKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNT 238
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ + + + A + L + R + N++++ L +EA + ++M G
Sbjct: 239 IIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNG 298
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T++ + L +N+ L + +G+ P TY ++ L G+ E
Sbjct: 299 CKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAI 358
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
R + + +V +YN +ID CK +++ A E EM DR I PN VT++T++ G
Sbjct: 359 RLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGF 418
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C ++ + +L ++ P+ TF+ ++D LC+ +A M E GV PN
Sbjct: 419 CNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNI 478
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
TYN L+ C + + ++F+ M +PD++++N LI +C +++KA+
Sbjct: 479 YTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQ 538
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M L P+ +Y+ ++K L GR +A++ F M +G P T +++L L + G
Sbjct: 539 MSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGH 598
Query: 481 FEEAHDIVKTSKER 494
+EA + K+ KE+
Sbjct: 599 LDEALKLFKSMKEK 612
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 221/460 (48%)
Query: 25 SIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYT 84
S+D A F +M+ +P + + I ++ + L QM+ G VY+
Sbjct: 73 SVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLN 132
Query: 85 ILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMER 144
ILI+ C V V M + + P+ T +L++GV A EL +
Sbjct: 133 ILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRS 192
Query: 145 EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNET 204
+ NTL+ L N+ + A + +KM G P T++ + L +N+
Sbjct: 193 GHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDA 252
Query: 205 CGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
L + RG+ P TY ++ L G+ E R + ++ +V +YN++ID
Sbjct: 253 MDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDS 312
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
K +++ A + EM D+ I P++VT+ T++ G C ++++ L + + G KPD
Sbjct: 313 LYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPD 372
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
+N++ID LC+ DA++ LSEMV+ G+PPN +TY+ ++ C +G + + +LF+
Sbjct: 373 VVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFK 432
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+M + P+ TF+ L+ C+ + +A F +M G+ P+ ++Y+AL+
Sbjct: 433 EMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRC 492
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ +EA++ F M GC PD ++ N+++ R ++A
Sbjct: 493 KMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKA 532
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%)
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
+P F + + + ++ + ++M +GV + NILI LC + V ++
Sbjct: 90 RPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVS 149
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
++ KM I PD+ TF LI C KI+ A + + M+ G PD SY+ LI L
Sbjct: 150 VWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLC 209
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
SG + A F MEQNGC P+ T N I+++L + +A D + RGI
Sbjct: 210 NSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGI 264
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 140/492 (28%), Positives = 237/492 (48%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P Y +I A K ++ A +M C P+ TYN++I G+CR ++DEA+
Sbjct: 211 VLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAI 270
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L + M G P++YTY ILI+GFC KR E +L M + + P T +L+ G
Sbjct: 271 ELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGF 330
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
R D +AF + + ++ NTLL + +A I+++M ++G P+S
Sbjct: 331 MRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDS 390
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + G ++ +LD KR + P TY +++ L + G + L
Sbjct: 391 QTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILRE 450
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + L N Y ++ K ++ + I MR++ I P++ +N+LI G CK
Sbjct: 451 MVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKR 510
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + R L+ +LE +P+ T+ + ID +A E A +EM+ GV PN Y
Sbjct: 511 MEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTA 570
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI C G+V + +F+ + + R+ D+ T++ LI R K+ +A F + G
Sbjct: 571 LIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 630
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
L P+ F+Y++LI K G D+A Q M G NPD T N++++ L + G E A
Sbjct: 631 LLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAK 690
Query: 486 DIVKTSKERGIS 497
++ + RG++
Sbjct: 691 NLFDDIEGRGLT 702
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 245/491 (49%), Gaps = 1/491 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P YNA+ID ++ I+ A+ +M + + +N L++G+C+ G +++
Sbjct: 314 VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEK 373
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL ++++M G P+ TY++LI+G C + +A F +L+ MK+R + P T +++
Sbjct: 374 ALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIIN 433
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ RC + +L + +V TL+ + E+ IL +M ++G LP
Sbjct: 434 GLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILP 493
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + + E L ++R ++P TY ++ KAG DRY
Sbjct: 494 DVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYF 553
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + ++ NV Y +I+ CK + A + R + R + ++ T++ LI G ++
Sbjct: 554 NEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRN 613
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++H+ + L E G P+ FT+NS+I C+ + A L EM G+ P+ +TY
Sbjct: 614 GKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTY 673
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NILI LC G++ R+ LF ++ ++P+ T+ A++ +C+ A + ML
Sbjct: 674 NILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLL 733
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ PD F Y+ ++ K +F++A F M + G + + N ++E + G+ +E
Sbjct: 734 RGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQE 792
Query: 484 AHDIVKTSKER 494
A+ +++ E+
Sbjct: 793 ANHLLEEMIEK 803
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 225/486 (46%), Gaps = 1/486 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P YN++I K+ ++ A +M + +P+ TY I G + G ++ A
Sbjct: 490 GILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIA 549
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R +M G PNV YT LI+G C V E F V + R V + T L+HG
Sbjct: 550 DRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHG 609
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R H+AF + E+ L N+L+ +A+ +L +M +G P+
Sbjct: 610 LSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPD 669
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L ++ + D RG+ P TY +++ K+ + L
Sbjct: 670 IVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLE 729
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + YN++++ CK ++A ++ +EM ++ A V+FNTLI G+CK
Sbjct: 730 EMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAST-VSFNTLIEGYCKSG 788
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + LL ++E F P+ T+ S+ID C+A +A EM E V P TY
Sbjct: 789 KLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYT 848
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ IG+++ LF++M A I PD T+ +I ++CR + +A K +L
Sbjct: 849 SLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVK 908
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ +Y ALI+AL K F E + + ++G T ++I G +EA
Sbjct: 909 GMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEA 968
Query: 485 HDIVKT 490
+++++
Sbjct: 969 AEVLRS 974
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 191/428 (44%), Gaps = 36/428 (8%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
+ Y+ +I L ++ + A+ F ++ P+ FTYN LI G C+ G VD+A +L++
Sbjct: 600 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 659
Query: 70 QMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
+M G P++ TY ILIDG C A + + + ++ R + PN T ++V G +
Sbjct: 660 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 719
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
+P AF+LL + R + N +L +A + ++M ++G+ +ST
Sbjct: 720 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF---ASTVS 776
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
+ L+E K+G+ E + L + +
Sbjct: 777 FNT---------------------------------LIEGYCKSGKLQEANHLLEEMIEK 803
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
+ + N +Y +ID CK MM A + EM++R++ P T+ +L+ G+ + +
Sbjct: 804 QFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEV 863
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
L ++ G +PDK T+ MID CR +A E++ G+P + Y+ LI++
Sbjct: 864 SALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQA 923
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
LC + L+L ++ + T + + + F +++A + SM+ G +
Sbjct: 924 LCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSN 983
Query: 430 NFSYSALI 437
S L+
Sbjct: 984 TTSLGDLV 991
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 165/386 (42%), Gaps = 42/386 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN++I K ++D A ++M + PD TYNILI G+C+ G ++ A
Sbjct: 630 GLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERA 689
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNE--------- 115
L +EG G PN TY ++DG+C +K F++LE M R V P+
Sbjct: 690 KNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNF 749
Query: 116 -------------------------ATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQK 150
+ +L+ G + +A LL +E++ +
Sbjct: 750 CCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNH 809
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL----DLNETCG 206
+ +L+ M EA + +M +R +P + T+ T L+ G +++E
Sbjct: 810 VTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTY----TSLLHGYHNIGNMSEVSA 865
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+ + + +G++P TY ++++A + G +E + + + + +V +Y+ +I C
Sbjct: 866 LFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALC 925
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K ++ E+ + L T + + G + + E+L +++ G+ +
Sbjct: 926 KKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTT 985
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMV 352
+ ++D ED+ + L +M
Sbjct: 986 SLGDLVDGNQNGANSEDSDNLLKQMA 1011
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 140/495 (28%), Positives = 240/495 (48%), Gaps = 40/495 (8%)
Query: 36 MSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR 95
++ + C D TY LI G+C++ +++AL + +M G+ P+VYTYT +I C R
Sbjct: 2 VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT 155
+ E + LE M RN+ PN T L+ G+ + +A LL + M ++ + + N+
Sbjct: 62 LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSK-MRKKCVPTAVTYNS 120
Query: 156 LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRG 215
L+ L ASEA +L +M G +P+ T+ +T ++ + + + RG
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180
Query: 216 VKPRFSTYLLLMEALYKAGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
+P TY L++ L K GR E D + + + N +YN +I FC++ MD A
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ M + +P++VT+ TL++G CK A + +LL + G PD TF S++D
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300
Query: 335 LCRAHRFEDALDCLSEM---------------------------------VEWGVPPNTI 361
LCR +R DA+ L EM E PPN +
Sbjct: 301 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVV 360
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
++NI+IR LC + + ++ L ++ + R +PD+ + +I CR K+++A + + M
Sbjct: 361 SFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKM 420
Query: 422 L-TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
L G P++ +YS LI L +G D A+ + GC P+ T NL+++ + R
Sbjct: 421 LEEPGCLPNSITYSTLITGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANR 476
Query: 481 FEEAHDIVKTSKERG 495
E+A +++ +RG
Sbjct: 477 DEDARELLDDMVQRG 491
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 214/458 (46%), Gaps = 9/458 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y AVI AL N + A ++M+ P+ TY +LI G+C+ G VDEA
Sbjct: 41 GFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEA 100
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M P TY LI G C A+R +E + +LE M P+ T +L+ G
Sbjct: 101 VALLSKMRK-KCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITG 159
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY-LP 183
+ A + + + R + + L+ L EA + +M G +P
Sbjct: 160 FCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMP 219
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ ++ ++E +L+ + G P TY LM K R + L
Sbjct: 220 NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL 279
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + + L +V ++ ++D C+ N + A I EMR + +P + T+NT++ G+C+
Sbjct: 280 NQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRA 339
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + R+ ++ ++C P+ +FN MI LC+ +R +A++ + E P+ + Y
Sbjct: 340 NQLEEARKFMLEEMDC--PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMY 397
Query: 364 NILIRSLCAIGDVARSLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+I LC V + R+++KM + P+ T++ LI C +++A +
Sbjct: 398 TTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRAR----GYI 453
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
G P+ +Y+ LI A K+ R ++A++ M Q G
Sbjct: 454 EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 155/312 (49%), Gaps = 6/312 (1%)
Query: 191 TVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T T L+ GL L + L + +G P TY ++ AL R E ++L +
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
L NV +Y ++ID CK +D A + +MR + + P VT+N+LISG CK
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERA 131
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ +LL ++ G PD FT+ ++I C++ + +DAL ++V G P+ +TY+ L
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191
Query: 367 IRSLCAIGDVARSLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
I LC G + ++ LF +M ++ P+ T+N+LI FCRM K+++A M G
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
PD +Y+ L+ K R D+A M + G PD T +++ L ++ R +A
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311
Query: 486 DIVKTSKERGIS 497
I+ + + S
Sbjct: 312 HILGEMRRKSCS 323
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 165/356 (46%), Gaps = 10/356 (2%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
+ G P Y +I KS D A F+Q+ +PD TY+ LI G+C+ G +
Sbjct: 143 YSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLK 202
Query: 63 EALRLVKQMEGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
EA+ L +M G PN TY LI GFC ++ E +LE M E P+ T +L
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 262
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRG 180
++G + A++LL + M R+ LT +V +L+ L + S+A IL +M +
Sbjct: 263 MNGFCKLARLDDAYDLLNQ-MTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKS 321
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P T++ + L E + + P ++ +++ L K R E
Sbjct: 322 CSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAM 379
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM-RDRDIAPNLVTFNTLISG 299
+ + R +V Y VID C+ +D A + R+M + PN +T++TLI+G
Sbjct: 380 ELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITG 439
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
C + + R +E G P+ T+N +ID +A+R EDA + L +MV+ G
Sbjct: 440 LCNAGMLDRARG----YIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 139/496 (28%), Positives = 236/496 (47%), Gaps = 12/496 (2%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+ +I + + A F +++ PD T+N L+HG+C V EAL L QM
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
PNV T+T L++G C R+ E +L+ M E + P + T ++V G+ + D
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTV 236
Query: 133 KAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
A +LL + E + +V + ++ L + S+A + +M ++G P+ T++
Sbjct: 237 SALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ + ++ +L ++R + P TY L+ A K G+ E + + + +
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+ N +Y+ +ID FCK N +D A + M + +PNL+TFNTLI G+C + E
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
LL + E G D T+N++I ALD L EM+ G+ P+ +T + L+ LC
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Query: 372 AIGDVARSLRLFQKMQADR-----------ISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
G + +L +F+ MQ + + PD+ T+N LI K +AE+ +
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G+ PD +YS++I L K R DEA Q F SM +P+ T ++ + GR
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596
Query: 481 FEEAHDIVKTSKERGI 496
++ ++ RGI
Sbjct: 597 VDDGLELFCEMGRRGI 612
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 135/502 (26%), Positives = 236/502 (47%), Gaps = 12/502 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + ++ +V+ DL +Q+M Q + D +++ ILI C + AL
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ LG P+V T+ L+ G C RV+E + M E PN T +L++G+ R
Sbjct: 137 FGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY-LPESS 186
+A LL R ME ++ T++ + A +LRKM + + +P
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVV 256
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ + L ++ + ++G+ P TY ++ +GR + ++ L +
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ ++ +V +YN +I+ F K A E+ EM R I PN +T++++I G CK +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ ++ G P+ TFN++ID C A R +D ++ L EM E G+ +T TYN L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL-- 424
I +GD+ +L L Q+M + + PDI T + L+ C K++ A + F M
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Query: 425 ---------GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G+ PD +Y+ LI LI G+F EA++ + M G PD+ T + +++ L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
Query: 476 VQQGRFEEAHDIVKTSKERGIS 497
+Q R +EA + + + S
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFS 578
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/489 (24%), Positives = 223/489 (45%), Gaps = 12/489 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ + +++ L + I A +M D +P + TY ++ G+C+IG AL L
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDL 241
Query: 68 VKQMEGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+++ME + + PNV Y+ +ID C R ++ + M+E+ + P+ T S++ G
Sbjct: 242 LRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
A +LL +ER+ + N L+ EA + +M RG +P +
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L+ + +G P T+ L++ A R +G L+ +
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ LV++ +YN +I F V ++ A ++ +EM + P++VT +TL+ G C + ++
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 307 HKTRELLVMLLEC-----------GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
E+ ++ + G +PD T+N +I L +F +A + EM G
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ P+TITY+ +I LC + + ++F M + SP++ TF LI +C+ +++
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ F M G+ + +Y LI K G + A F M +G PD+ T +L L
Sbjct: 602 ELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Query: 476 VQQGRFEEA 484
+ + A
Sbjct: 662 WSKEELKRA 670
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 178/383 (46%), Gaps = 26/383 (6%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP YNA+I+A VK A + +M P+ TY+ +I G C+ +D A
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M G +PN+ T+ LIDG+C AKR+ + +L M E + + T +L+HG
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDRGYLPE 184
+ D + A +LL + + C+TLL L +N +A + + M + L
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S F+ GV+P TY +L+ L G+ +E +
Sbjct: 501 SHPFN-------------------------GVEPDVQTYNILISGLINEGKFLEAEELYE 535
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +V + +Y+ +ID CK + +D AT++ M + +PN+VTF TLI+G+CK
Sbjct: 536 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V EL + G + T+ ++I + ALD EM+ GV P+TIT
Sbjct: 596 RVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIR 655
Query: 365 ILIRSLCAIGDVARSLRLFQKMQ 387
++ L + ++ R++ + +K+Q
Sbjct: 656 NMLTGLWSKEELKRAVAMLEKLQ 678
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 194/426 (45%), Gaps = 23/426 (5%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ +Y+A+ID+L K A F +M PD FTYN +I G C G +A
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+L+++M +P+V TY LI+ F + E + + M R + PN T S++ G
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG- 369
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F + A E + M + + L+ NTL+ + +L +M + G + +
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL-------------- 230
++T++ + DLN +L I G+ P T L++ L
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489
Query: 231 --YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
K+ +D++ N V D V +YN++I A E+ EM R I P
Sbjct: 490 VMQKSKKDLDASHPFNGVEPD-----VQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+ +T++++I G CK + + + ++ + F P+ TF ++I+ C+A R +D L+
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
EM G+ N ITY LI +G++ +L +FQ+M + + PD T ++
Sbjct: 605 CEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664
Query: 409 NKIEKA 414
++++A
Sbjct: 665 EELKRA 670
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 184/413 (44%), Gaps = 3/413 (0%)
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
L GF K + + + M P+ L+ V R P L + MER+
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQK-MERK 108
Query: 146 PLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNET 204
+ + T+L + + S A + K+ G P+ TF+ + L ++E
Sbjct: 109 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEA 168
Query: 205 CGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
+ + +P T+ LM L + GR VE L+ + +D L +Y ++D
Sbjct: 169 LNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDG 228
Query: 265 FCKVNMMDRATEICREMRD-RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
CK+ A ++ R+M + I PN+V ++ +I CKD + L + E G P
Sbjct: 229 MCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D FT+NSMI C + R+ DA L EM+E + P+ +TYN LI + G + L+
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY 348
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+M I P+ T++++I FC+ N+++ AE F+ M T G P+ +++ LI +
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
R D+ + M + G D+ T N ++ G A D+++ G+
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G+ P + YN +I L+ A +++M PD TY+ +I G+C+ +D
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA ++ M ++PNV T+T LI+G+C A RV + + M R + N T +L+
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
G + + + A ++ + + +L L + A A+L K+
Sbjct: 624 CGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 245/507 (48%), Gaps = 16/507 (3%)
Query: 5 GISPSTRLYNAVIDALVKSN-SIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P YNAV+DA ++S +I A F++M Q P+ FTYNILI G C G +D
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L +ME G PNV TY LIDG+C +++ + F++L M + + PN + +++
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R + +L R ++ NTL+ +A + +M G P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ + + ++N LD RG+ P TY L++ + G E R L
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +V +YN +I+ C M+ A + +M+++ ++P++V+++T++SG C+
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V + + ++E G KPD T++S+I C R ++A D EM+ G+PP+ TY
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI + C GD+ ++L+L +M + PD+ T++ LI + ++ +A++ +
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 424 LGLRPDNFSYSALIK-----------ALIKS----GRFDEAKQTFLSMEQNGCNPDSYTS 468
P + +Y LI+ +LIK G EA Q F SM PD
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAY 643
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERG 495
N+++ + G +A+ + K + G
Sbjct: 644 NIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 222/470 (47%), Gaps = 3/470 (0%)
Query: 18 DALVKSNSIDLAYLKFQ--QMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLG 75
D K+ + A L F+ Q + D C +++++ R+ ++D+AL +V + G
Sbjct: 105 DVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHG 164
Query: 76 YAPNVYTYTILIDGFCNAKR-VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
+ P V +Y ++D +KR ++ V + M E V PN T L+ G + A
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA 224
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
L + + L + NTL+ + +LR M +G P +++ +
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
L + E +L +RG TY L++ K G + + + L +
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 344
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
V +Y +I CK M+RA E +MR R + PN T+ TL+ G + +++ +L
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
+ + GF P T+N++I+ C + EDA+ L +M E G+ P+ ++Y+ ++ C
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
DV +LR+ ++M I PD T+++LIQ FC + ++A + ML +GL PD F+Y+
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
ALI A G ++A Q M + G PD T ++++ L +Q R EA
Sbjct: 525 ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 121/499 (24%), Positives = 226/499 (45%), Gaps = 50/499 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN +ID K ID + + M++ +P+ +YN++I+G+CR G + E
Sbjct: 235 GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEV 294
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +M GY+ + TY LI G+C + + M + P+ T SL+H
Sbjct: 295 SFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHS 354
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + ++A E L + R + TL+ S +EA +LR+M D G+ P
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 414
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + + +L+ ++G+ P
Sbjct: 415 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP-------------------------- 448
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+V SY+ V+ FC+ +D A + REM ++ I P+ +T+++LI G C+
Sbjct: 449 ---------DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +L +L G PD+FT+ ++I+ C E AL +EMVE GV P+ +TY+
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN---------------ALIQSFCRMN 409
+LI L + RL K+ + P T++ +LI+ FC
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG 619
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
+ +A++ F SML +PD +Y+ +I ++G +A + M ++G + T
Sbjct: 620 MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVI 679
Query: 470 LILETLVQQGRFEEAHDIV 488
+++ L ++G+ E + ++
Sbjct: 680 ALVKALHKEGKVNELNSVI 698
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 190/389 (48%), Gaps = 13/389 (3%)
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQ-KL--VCNTLLYRLSNNSMASEAAAILRK 175
++L+ +PH+ F L + + LT+ KL L ++ ++ E A+++ K
Sbjct: 62 QALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFK 121
Query: 176 MGDRGY---LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK 232
Y SS FD V +++ I+ G P +Y +++A +
Sbjct: 122 SLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIR 181
Query: 233 AGRDVEGDRYLNHVFKDRLVS----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
+ R++ + +VFK+ L S NV +YN++I FC +D A + +M + P
Sbjct: 182 SKRNIS---FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLP 238
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
N+VT+NTLI G+CK ++ +LL + G +P+ ++N +I+ LCR R ++ L
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
+EM G + +TYN LI+ C G+ ++L + +M ++P + T+ +LI S C+
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+ +A + M GL P+ +Y+ L+ + G +EA + M NG +P T
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGIS 497
N ++ G+ E+A +++ KE+G+S
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 179/408 (43%), Gaps = 50/408 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++PS Y ++I ++ K+ +++ A QM V P+ TY L+ G + G ++EA
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++++M G++P+V TY LI+G C ++ + VLE MKE+ + P+ + +++ G
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R D +A + +E+ + ++L+ EA + +M G P+
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + DL + + + +++GV P TY +L+ L K R E R L
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 245 HVFKDRLV-SNVNSYNMVIDC--------------FCKVNMMDRATEICREMRDRDIAPN 289
+F + V S+V + ++ +C FC MM A ++ M ++ P+
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT----------------FNSMID 333
+N +I GHC+ ++ K L +++ GF T NS+I
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIV 699
Query: 334 CLCRAHRFEDA-------------------LDCLSEMVEWGVPPNTIT 362
+ R+ +A LD L+EM + G PN I+
Sbjct: 700 HVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 15/185 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P Y A+I+A ++ A +M PD TY++LI+G+ + E
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573
Query: 64 ALRLVKQMEGLGYAPNVYTYTILID---------------GFCNAKRVAEVFRVLEIMKE 108
A RL+ ++ P+ TY LI+ GFC + E +V E M
Sbjct: 574 AKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLG 633
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE 168
+N P+ ++HG R D KA+ L ++ L + L+ L +E
Sbjct: 634 KNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Query: 169 AAAIL 173
+++
Sbjct: 694 LNSVI 698
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 230/499 (46%), Gaps = 36/499 (7%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I G+ P T YN +++ LV N++ L + +MSV KPD T+N+LI +CR
Sbjct: 145 IDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A+ +++ M G P+ T+T ++ G+ + R+ E M E + +V
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR- 179
+VHG + +A +++M ++
Sbjct: 265 IVHGFCK-----------------------------------EGRVEDALNFIQEMSNQD 289
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G+ P+ TF+ V L + I+D ++ G P TY ++ L K G E
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+L+ + N +YN +I CK N ++ ATE+ R + + I P++ TFN+LI G
Sbjct: 350 VEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
C EL + G +PD+FT+N +ID LC + ++AL+ L +M G +
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
ITYN LI C + + +F +M+ +S + T+N LI C+ ++E A +
Sbjct: 470 VITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMD 529
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M+ G +PD F+Y++L+ + G +A +M NGC PD T ++ L + G
Sbjct: 530 QMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 480 RFEEAHDIVKTSKERGISF 498
R E A ++++ + +GI+
Sbjct: 590 RVEVASKLLRSIQMKGIAL 608
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 226/475 (47%), Gaps = 3/475 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P + + ++ ++ +D A +QM C + N+++HG C+ G V++A
Sbjct: 219 GLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDA 278
Query: 65 LRLVKQMEGL-GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L +++M G+ P+ YT+ L++G C A V ++++M + P+ T S++
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + + +A E L + + R+ + NTL+ L + EA + R + +G LP
Sbjct: 339 GLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF+ + L + + + +G +P TY +L+++L G+ E L
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +V +YN +ID FCK N + A EI EM ++ N VT+NTLI G CK
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V +L+ ++ G KPDKFT+NS++ CR + A D + M G P+ +TY
Sbjct: 519 RRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI LC G V + +L + +Q I+ + +N +IQ R K +A F ML
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638
Query: 424 LG-LRPDNFSYSALIKALIKSGR-FDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
PD SY + + L G EA + + + G P+ + ++ E L+
Sbjct: 639 QNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLL 693
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 165/328 (50%), Gaps = 3/328 (0%)
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
KM G P+ STF+ + L L +L+ G+ P T+ +M+ + G
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEG 238
Query: 235 RDVEGDRYLNHVFKDRLVSNVN-SYNMVIDCFCKVNMMDRATEICREMRDRD-IAPNLVT 292
D++G + + S N S N+++ FCK ++ A +EM ++D P+ T
Sbjct: 239 -DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
FNTL++G CK V E++ ++L+ G+ PD +T+NS+I LC+ ++A++ L +M+
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMI 357
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
PNT+TYN LI +LC V + L + + + I PD+ TFN+LIQ C
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
A + F M + G PD F+Y+ LI +L G+ DEA ME +GC T N ++
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 473 ETLVQQGRFEEAHDIVKTSKERGISFKS 500
+ + + EA +I + G+S S
Sbjct: 478 DGFCKANKIREAEEIFDEMEVHGVSRNS 505
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 167/391 (42%), Gaps = 70/391 (17%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +N++I L + + +A F++M C+PD FTYN+LI +C G +DEA
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++KQME G A +V TY LIDGFC A ++ E + + M+ VHG
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEME--------------VHG 500
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
V R + NTL+ L + +A+ ++ +M G P+
Sbjct: 501 VSR---------------------NSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPD 539
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ +T G D+ + I+ G +P TY L+ L KAGR + L
Sbjct: 540 KFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR-DIAPNLVTFNTLISGHCKD 303
+ + ++YN VI + A + REM ++ + AP+ V++ + G C
Sbjct: 600 SIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNG 659
Query: 304 A-EVHKTRELLVMLLECGFKPD-----------------------------KFTFN---- 329
+ + + LV LLE GF P+ K F+
Sbjct: 660 GGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEV 719
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
SM+ L + +F+DAL L +++ P T
Sbjct: 720 SMVKGLLKIRKFQDALATLGGVLDSRQPRRT 750
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 1/182 (0%)
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
M+ + G KPD +N M++ L + + ++M WG+ P+ T+N+LI++LC
Sbjct: 144 MIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAH 203
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
+ ++ + + M + + PD TF ++Q + ++ A + M+ G N S +
Sbjct: 204 QLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVN 263
Query: 435 ALIKALIKSGRFDEAKQTFLSME-QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
++ K GR ++A M Q+G PD YT N ++ L + G + A +I+ +
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323
Query: 494 RG 495
G
Sbjct: 324 EG 325
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 1/181 (0%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
F P+ + ++ L R+ F+D L +M G T + ILI S L
Sbjct: 79 FSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEIL 138
Query: 381 RLFQKMQAD-RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+ M D + PD + +N ++ N ++ E A M G++PD +++ LIKA
Sbjct: 139 GVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKA 198
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
L ++ + A M G PD T I++ +++G + A I + E G S+
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWS 258
Query: 500 S 500
+
Sbjct: 259 N 259
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 134/495 (27%), Positives = 250/495 (50%), Gaps = 8/495 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ +T YN ++++L + I A+ +M C PD +Y +I G C +G + +
Sbjct: 104 LGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQK 163
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
++LVK+M+ G PN+YTY+ +I C + +V E +VL M +R V P+ +L+
Sbjct: 164 VVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLID 223
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + + A++L RE + + + L+ LS + EA + +M +G+ P
Sbjct: 224 GFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEP 283
Query: 184 ESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
+ T+ T L+ G ++ + + + ++ G+ P TY L + L K+G
Sbjct: 284 DEVTY----TALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTA 339
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ L+ + + L N+++YN +++ CK + +A ++ EM++ + P+ +T+ TL+
Sbjct: 340 NELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDA 399
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ K E+ K RELL +L+ G +P TFN +++ LC + + ED L M+E G+ PN
Sbjct: 400 YYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPN 459
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
TYN +++ C ++ S +++ M A + PD T+N LI+ C+ +++A
Sbjct: 460 AATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHK 519
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M+ SY+ALIK K + EA+Q F M + G + NL ++ ++G
Sbjct: 520 EMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEG 579
Query: 480 RFEEAHDIVKTSKER 494
E ++ + E+
Sbjct: 580 NMETTLELCDEAIEK 594
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 174/351 (49%), Gaps = 6/351 (1%)
Query: 152 VC-NTLLYRLSNNSM-----ASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
VC NT Y + NS+ EA +L +M +G +P+ ++ + +L +
Sbjct: 106 VCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVV 165
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
++ +G+KP TY ++ L K+G+ VEG++ L + K + + Y +ID F
Sbjct: 166 QLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGF 225
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
CK+ A ++ EM R+I P+ + F+ LI G +V + +L +++ GF+PD+
Sbjct: 226 CKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDE 285
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T+ ++ID C+ + A ++MV+ G+ PN +TY L LC G++ + L +
Sbjct: 286 VTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHE 345
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M + +I T+N ++ C+ I +A K M GL PD +Y+ L+ A K+G
Sbjct: 346 MCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGE 405
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+A++ M G P T N+++ L G+ E+ ++K E+GI
Sbjct: 406 MVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGI 456
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 167/338 (49%), Gaps = 1/338 (0%)
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLD-LNETCGILDTFIKRGVKP 218
L + +EA K+ + G + + + +TCL + D L + F + GV
Sbjct: 49 LVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCW 108
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
+Y +LM +L++ G+ E L + + +V SY +ID +C V + + ++
Sbjct: 109 NTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLV 168
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
+EM+ + + PNL T++++I CK +V + ++L +++ G PD + ++ID C+
Sbjct: 169 KEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKL 228
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+ A SEM + P++I ++ LI L G V + +LF +M PD T+
Sbjct: 229 GNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTY 288
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
ALI +C++ +++KA M+ +GL P+ +Y+AL L KSG D A + M +
Sbjct: 289 TALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCR 348
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G + T N I+ L + G +A +++ KE G+
Sbjct: 349 KGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGL 386
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/493 (27%), Positives = 239/493 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ S N+++ LVK +DLA+ +Q++ + + +T NI+I+ +C+ ++
Sbjct: 214 GLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENT 273
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ME G P+V TY LI+ +C + E F +++ M + + P T ++++G
Sbjct: 274 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 333
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A +L ++ N LL N +A I +M +G +P+
Sbjct: 334 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 393
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+F + L L++ G+ P Y +L+ + G E + +
Sbjct: 394 LVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRD 453
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + V +V +YN +++ CK M+ A E+ EM +R + P+ TF TLI+G+ KD
Sbjct: 454 EMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDG 513
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++K L M+++ KPD T+N++ID C+ E + ++M+ + PN I+Y
Sbjct: 514 NMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYG 573
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
ILI C +G V+ + RL+ +M I T N +++ +CR KA++ +ML
Sbjct: 574 ILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK 633
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ PD +Y+ LI IK D A ME +G PD T N+IL +QGR +EA
Sbjct: 634 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 693
Query: 485 HDIVKTSKERGIS 497
I+ ERG++
Sbjct: 694 ELIMLKMIERGVN 706
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 223/463 (48%), Gaps = 6/463 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN +I+A + ++ A+ MS KP FTYN +I+G+C+ G A
Sbjct: 284 GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRA 343
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +M +G +P+ TY IL+ C + + R+ + M + V P+ + +L+
Sbjct: 344 KGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGL 403
Query: 125 VFR--CLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGY 181
+ + CLD + R M+ L V T+L N + SEA + +M ++G
Sbjct: 404 LSKNGCLDQALKY---FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGC 460
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+ + T++ + L L+E + +RGV P F T+ L+ K G +
Sbjct: 461 VLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVT 520
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + L +V +YN +ID FCK + M++ E+ +M R I PN +++ LI+G+C
Sbjct: 521 LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYC 580
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
V + L ++E GF+ T N+++ CRA A + LS M+ G+ P+ I
Sbjct: 581 NMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 640
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN LI ++ R+ L KM+ + PD+ T+N ++ F R ++++AE M
Sbjct: 641 TYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 700
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+ G+ PD +Y++LI + EA + M Q G PD
Sbjct: 701 IERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 220/495 (44%), Gaps = 8/495 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ + N +I+AL K+ I+ M PD TYN LI+ CR G+++EA
Sbjct: 249 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 308
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G G P V+TY +I+G C + VL+ M + + P+ AT L+
Sbjct: 309 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 368
Query: 125 VFR---CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRG 180
R +D + F+ M + + LV + L+ LS N +A R M + G
Sbjct: 369 CCRNDNMMDAERIFDE----MPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 424
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P++ + + ++E + D +++G TY ++ L K E D
Sbjct: 425 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 484
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + + ++ +I+ + K M++A + M R++ P++VT+NTLI G
Sbjct: 485 ELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 544
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK +E+ K EL ++ P+ ++ +I+ C +A EMVE G
Sbjct: 545 CKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATI 604
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
IT N +++ C G+ ++ M I PD T+N LI F + +++A
Sbjct: 605 ITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNK 664
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M GL PD +Y+ ++ + GR EA+ L M + G NPD T ++ V Q
Sbjct: 665 MENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNN 724
Query: 481 FEEAHDIVKTSKERG 495
+EA + +RG
Sbjct: 725 LKEAFRVHDEMLQRG 739
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 134/271 (49%)
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
LL+ +A + EG + L ++N+ N ++ KV +D A EI +E+
Sbjct: 189 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 248
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
+ N+ T N +I+ CK+ ++ T+ L + E G PD T+N++I+ CR E+A
Sbjct: 249 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 308
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
+ + M G+ P TYN +I LC G R+ + +M +SPD T+N L+
Sbjct: 309 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 368
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
CR + + AE+ F M + G+ PD S+SALI L K+G D+A + F M+ G PD
Sbjct: 369 CCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 428
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ +++ + G EA + E+G
Sbjct: 429 NVIYTILIGGFCRNGVMSEALKVRDEMLEQG 459
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 120/245 (48%)
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
SN +++++ + + + E R ++ + + ++ N+L+ G K V E+
Sbjct: 182 SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEI 241
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
++ G + + +T N MI+ LC+ + E+ LS+M E GV P+ +TYN LI + C
Sbjct: 242 YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR 301
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G + + L M + P ++T+NA+I C+ K +A+ ML +G+ PD +
Sbjct: 302 QGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 361
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y+ L+ ++ +A++ F M G PD + + ++ L + G ++A + K
Sbjct: 362 YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK 421
Query: 493 ERGIS 497
G++
Sbjct: 422 NAGLA 426
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 240/495 (48%), Gaps = 40/495 (8%)
Query: 36 MSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR 95
++ + C D TY LI G+C++ +++AL + +M G+ P+VYTYT +I C R
Sbjct: 2 VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT 155
+ E + LE M RN+ PN T L+ G+ + +A LL + M ++ + + N+
Sbjct: 62 LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSK-MRKKCVPTAVTYNS 120
Query: 156 LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRG 215
L+ L ASEA +L +M G +P+ T+ +T ++ + + + RG
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180
Query: 216 VKPRFSTYLLLMEALYKAGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
+P TY L++ L K GR E D + + + N +YN +I FC++ MD A
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ M + +P++VT+ TL++G CK A + +LL + G PD TF S++D
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300
Query: 335 LCRAHRFEDALDCLSEM---------------------------------VEWGVPPNTI 361
LCR +R DA+ L EM E PPN +
Sbjct: 301 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVV 360
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
++NI+IR LC + + ++ L ++ + R +PD+ + +I CR K+++A + + M
Sbjct: 361 SFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKM 420
Query: 422 L-TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
L G P++ +YS L+ L +G D A+ + GC P+ T NL+++ + R
Sbjct: 421 LEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANR 476
Query: 481 FEEAHDIVKTSKERG 495
E+A +++ +RG
Sbjct: 477 DEDARELLDDMVQRG 491
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/458 (25%), Positives = 214/458 (46%), Gaps = 9/458 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y AVI AL N + A ++M+ P+ TY +LI G+C+ G VDEA
Sbjct: 41 GFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEA 100
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M P TY LI G C A+R +E + +LE M P+ T +L+ G
Sbjct: 101 VALLSKMRK-KCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITG 159
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY-LP 183
+ A + + + R + + L+ L EA + +M G +P
Sbjct: 160 FCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMP 219
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ ++ ++E +L+ + G P TY LM K R + L
Sbjct: 220 NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL 279
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + + L +V ++ ++D C+ N + A I EMR + +P + T+NT++ G+C+
Sbjct: 280 NQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRA 339
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + R+ ++ ++C P+ +FN MI LC+ +R +A++ + E P+ + Y
Sbjct: 340 NQLEEARKFMLEEMDC--PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMY 397
Query: 364 NILIRSLCAIGDVARSLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+I LC V + R+++KM + P+ T++ L+ C +++A +
Sbjct: 398 TTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRAR----GYI 453
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
G P+ +Y+ LI A K+ R ++A++ M Q G
Sbjct: 454 EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 155/312 (49%), Gaps = 6/312 (1%)
Query: 191 TVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T T L+ GL L + L + +G P TY ++ AL R E ++L +
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
L NV +Y ++ID CK +D A + +MR + + P VT+N+LISG CK
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERA 131
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ +LL ++ G PD FT+ ++I C++ + +DAL ++V G P+ +TY+ L
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191
Query: 367 IRSLCAIGDVARSLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
I LC G + ++ LF +M ++ P+ T+N+LI FCRM K+++A M G
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
PD +Y+ L+ K R D+A M + G PD T +++ L ++ R +A
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311
Query: 486 DIVKTSKERGIS 497
I+ + + S
Sbjct: 312 HILGEMRRKSCS 323
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 165/356 (46%), Gaps = 10/356 (2%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
+ G P Y +I KS D A F+Q+ +PD TY+ LI G+C+ G +
Sbjct: 143 YSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLK 202
Query: 63 EALRLVKQMEGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
EA+ L +M G PN TY LI GFC ++ E +LE M E P+ T +L
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 262
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRG 180
++G + A++LL + M R+ LT +V +L+ L + S+A IL +M +
Sbjct: 263 MNGFCKLARLDDAYDLLNQ-MTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKS 321
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P T++ + L E + + P ++ +++ L K R E
Sbjct: 322 CSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAM 379
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM-RDRDIAPNLVTFNTLISG 299
+ + R +V Y VID C+ +D A + R+M + PN +T++TL++G
Sbjct: 380 ELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTG 439
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
C + + R +E G P+ T+N +ID +A+R EDA + L +MV+ G
Sbjct: 440 LCNAGMLDRARG----YIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 249/486 (51%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGIS + Y+ +I+ + + + LA +M +PD T N L++G C + +
Sbjct: 110 LGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISD 169
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ LV QM +GY P+ +T+ LI G R +E +++ M + P+ T +V+
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + D A LL + + + ++ NT++ L N ++A + +M ++G P
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + CL ++ +L I+R + P T+ L++A K G+ VE ++
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K + ++ +Y+ +I+ FC + +D A + M +D PN+VT+NTLI G CK
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V + EL + + G + T+ ++I +A ++A +MV GV P+ +TY
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+IL+ LC G V +L +F+ +Q ++ PDIYT+N +I+ C+ K+E F S+
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G++P+ +Y+ ++ + G +EA F M++ G PDS T N ++ ++ G
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAA 589
Query: 484 AHDIVK 489
+ ++++
Sbjct: 590 SAELIR 595
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 246/492 (50%), Gaps = 8/492 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ ++ A+ K N DL +QM + +TY+ILI+ CR + AL +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P++ T L++GFC+ R+++ ++ M E P+ T +L+HG+FR
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 128 CLDPHKAFELLIRFMER--EP--LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+A L+ R + + +P +T +V N L R A ++L+KM P
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR----GDIDLALSLLKKMEQGKIEP 254
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ + L ++N+ + +G++P TY L+ L GR + R L
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 314
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + ++ NV +++ +ID F K + A ++ EM R I P++ T+++LI+G C
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + + + +++ P+ T+N++I C+A R ++ ++ EM + G+ NT+TY
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI + + +F++M +D + PDI T++ L+ C K+E A F +
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+ PD ++Y+ +I+ + K+G+ ++ F S+ G P+ T ++ ++G EE
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554
Query: 484 AHDIVKTSKERG 495
A + + KE G
Sbjct: 555 ADALFREMKEEG 566
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 164/333 (49%)
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
S S A A+L KM GY P+ T + + G +++ ++ ++ G +P T+
Sbjct: 130 SQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTF 189
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
L+ L++ R E ++ + ++ +Y +V++ CK +D A + ++M
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ 249
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
I P +V +NT+I C V+ L + G +P+ T+NS+I CLC R+ D
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 309
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A LS+M+E + PN +T++ LI + G + + +L+ +M I PDI+T+++LI
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
FC +++++A+ F M++ P+ +Y+ LIK K+ R DE + F M Q G
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++ T ++ Q + A + K G+
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 134/243 (55%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
N+ +Y+++I+CFC+ + + A + +M P++VT N+L++G C + L+
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++E G++PD FTFN++I L R +R +A+ + MV G P+ +TY I++ LC
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
GD+ +L L +KM+ +I P + +N +I + C + A F M G+RP+ +Y
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
++LI+ L GR+ +A + M + NP+ T + +++ V++G+ EA + +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 494 RGI 496
R I
Sbjct: 355 RSI 357
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 185/419 (44%), Gaps = 4/419 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y V++ L K IDLA ++M + +P YN +I +C V++A
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M+ G PNV TY LI CN R ++ R+L M ER + PN T +L+
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +L ++R ++L+ + EA + M + P
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + ++E + +RG+ TY L+ ++A
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D ++ ++ +Y++++D C ++ A + ++ + P++ T+N +I G CK
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V +L L G KP+ T+ +M+ CR E+A EM E G P++ TYN
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYN 575
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LIR+ GD A S L ++M++ R D T + M + +K+F ML+
Sbjct: 576 TLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTN----MLHDGRLDKSFLKMLS 630
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 75/149 (50%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ +DA++ +MV+ P+ + ++ L+ ++ + + L ++MQ IS ++YT++
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI FCR +++ A M+ LG PD + ++L+ R +A M +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIV 488
G PDS+T N ++ L + R EA +V
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALV 209
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 50/123 (40%)
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
++ LF M R P I F+ L+ + +MNK + M LG+ + ++YS LI
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
+ + A M + G PD T N +L R +A +V E G
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 499 KSF 501
SF
Sbjct: 185 DSF 187
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/525 (26%), Positives = 261/525 (49%), Gaps = 35/525 (6%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ ++ A+ K N D+ +QM + +TY+ILI+ CR + AL +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY PN+ T + L++G+C++KR++E +++ M PN T +L+HG+F
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 128 CLDPHKAFELLIRFMER--EP--LTQKLVCNTLLYR------------------------ 159
+A L+ R + + +P +T +V N L R
Sbjct: 199 HNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLI 258
Query: 160 -------LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
L N +A + ++M +G P T+ ++CL ++ +L I
Sbjct: 259 YTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+R + P T+ L++A K G+ VE ++ + + K + ++ +Y+ +I+ FC + +D
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A ++ M + P++V+++TLI G CK V + EL + + G + T+ ++I
Sbjct: 379 EAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
L +A + A + EMV GVPPN +TYN L+ LC G + +++ +F+ +Q ++
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
P IYT+N +I+ C+ K+E F ++ G++PD +Y+ +I + G +EA
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
F M+++G P+S N ++ ++ G E + +++K + G +
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 603
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 163/363 (44%)
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A L ++ P + + LL ++ + ++ +M + G T+ +
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILIN 124
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
C L +L +K G +P T L+ + R E ++ +F
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
N ++N +I N A + M + P+LVT+ +++G CK + LL
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILL 244
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ + +P + ++ID LC+ +DAL+ EM G+ PN +TY+ LI LC
Sbjct: 245 NKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G + + RL M +I+PD++TF+ALI +F + K+ +AEK + M+ + P +Y
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
S+LI R DEAKQ F M C PD + + +++ + R +E ++ + +
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 494 RGI 496
RG+
Sbjct: 425 RGL 427
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 172/419 (41%), Gaps = 78/419 (18%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y V++ L K DLA++ +M + +P Y +I G+C+ +D+A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDA 275
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L K+ME G PNV TY+ LI CN R ++ R+L M ER + P+ T +L+
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 125 -----------------VFRCLDP---------------------HKAFELLI------- 139
V R +DP + FE ++
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 140 ------------------RFME--REPLTQKLVCNTL--------LYRLSNNSMASEAAA 171
ME RE + LV NT+ L++ + MA E
Sbjct: 396 VVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQE--- 452
Query: 172 ILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY 231
I ++M G P T++ + L L + + + + ++P TY +++E +
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 232 KAGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
KAG+ +G D + N K + +V +YN +I FC+ + A + +EM++ PN
Sbjct: 513 KAGKVEDGWDLFCNLSLKG-VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+NTLI +D + + EL+ + CGF D T + + L + LD LS
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 630
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%)
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+D A + EM P+++ F+ L+S K + L + G + +T++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I+C CR + AL L +M++ G PN +T + L+ C ++ ++ L +M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
P+ TFN LI NK +A M+ G +PD +Y ++ L K G D A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
MEQ P I++ L + ++A ++ K + +GI
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGI 287
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ +DA+ EMV+ P+ I ++ L+ ++ + + L ++MQ + + YT++
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI FCR +++ A M+ LG P+ + S+L+ S R EA M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G P++ T N ++ L + EA ++ +G
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKG 216
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P YN +I + S + A F++M D P+ YN LI R G
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 586
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID 88
+ + L+K+M G+A + T ++ +
Sbjct: 587 REASAELIKEMRSCGFAGDASTIGLVTN 614
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/481 (30%), Positives = 235/481 (48%), Gaps = 5/481 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP+ + V+ A N +D A + M+ C P+ Y +LIH + V+EA
Sbjct: 195 GISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEA 254
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+++M +G P+V T+ +I G C A R+ E ++ + M R+ + L+HG
Sbjct: 255 MKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHG 314
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK-MGDRGYLP 183
+ R +A +L + P ++ NTL+ + EA +L K M G+ P
Sbjct: 315 LCRMGKVDEARAMLSKI----PNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEP 370
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ TF+ + L L LD +K+G +P TY +L++ K G E + +
Sbjct: 371 DAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + L N YN +I CK + A ++ EM + P++ TFN+LI G CK+
Sbjct: 431 NSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKN 490
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + L +L G + T+N++I R + A + EM G P + ITY
Sbjct: 491 DKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITY 550
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI++LC G + L L ++M + I P I + N LI SFCR K+ A + M+
Sbjct: 551 NGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQ 610
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL PD +Y++LI L K GRF EA F ++ G +PD+ T N ++ +G F +
Sbjct: 611 RGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFND 670
Query: 484 A 484
A
Sbjct: 671 A 671
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 195/442 (44%), Gaps = 5/442 (1%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
+G P + +N VI L K+ I A +M + D L+HG+CR+G VD
Sbjct: 263 LMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVD 322
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL-EIMKERNVCPNEATVRSL 121
EA ++ ++ PN Y LI+G+ + R E +L + M P+ T +
Sbjct: 323 EARAMLSKIPN----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIM 378
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ G+ + A E L +++ + L+ EA+ ++ M +G
Sbjct: 379 IDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGL 438
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+ ++ + L + + + +G KP T+ L+ L K + E
Sbjct: 439 SLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALG 498
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + +++N +YN +I F ++ ++ +A ++ EMR R + +T+N LI C
Sbjct: 499 LYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALC 558
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K K L+ + P + N +I+ CR + DAL L +M++ G+ P+ +
Sbjct: 559 KTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIV 618
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN LI LC +G +L LF +QA I PD T+N LI +C A + F
Sbjct: 619 TYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKG 678
Query: 422 LTLGLRPDNFSYSALIKALIKS 443
++ G P+ ++S LI +K+
Sbjct: 679 VSNGFIPNEITWSILINYFVKN 700
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 196/456 (42%), Gaps = 37/456 (8%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
GY + + Y +LID N + ++L+ MK+ E+ ++ + P +A
Sbjct: 89 GYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQA 148
Query: 135 FELLIRFMER---EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
LL+ EP + N +L L + A + M RG P TF
Sbjct: 149 TRLLLDMWGVYCFEPTFKSY--NVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVV 206
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ +++ C +L K G P Y +L+ AL + R E + L +F
Sbjct: 207 MKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGC 266
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA------------------------ 287
+V ++N VI CK + A ++ M RD
Sbjct: 267 EPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARA 326
Query: 288 -------PNLVTFNTLISGHCKDAEVHKTRELLVM-LLECGFKPDKFTFNSMIDCLCRAH 339
PN V +NTLI+G+ + ++LL ++ GF+PD FTFN MID LC+
Sbjct: 327 MLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKG 386
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
AL+ L EMV+ G PN ITY ILI C G + ++ M A +S + +N
Sbjct: 387 YLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYN 446
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI + C+ KI+ A + + M + G +PD +++++LI L K+ + +EA + M
Sbjct: 447 CLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLE 506
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G ++ T N ++ ++ ++A +V + RG
Sbjct: 507 GVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRG 542
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 126/501 (25%), Positives = 214/501 (42%), Gaps = 60/501 (11%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
+P +YN+++ + A + M G +P VYT+ +++ FC V
Sbjct: 162 EPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACS 221
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELL--IRFMEREPLTQKLVCNTLLYR 159
+L M + PN + L+H + ++A +LL + M EP Q N +++
Sbjct: 222 LLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTF--NDVIHG 279
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC--GILD---TFIKR 214
L EAA K+ DR L D+T L+ G ++ C G +D + +
Sbjct: 280 LCKAGRIHEAA----KLHDRMLLR-----DFTADALIQGYLMHGLCRMGKVDEARAMLSK 330
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVN----SYNMVIDCFCKVNM 270
P Y L+ +GR E L +K+ +++ ++N++ID CK
Sbjct: 331 IPNPNTVLYNTLINGYVVSGRFEEAKDLL---YKNMVIAGFEPDAFTFNIMIDGLCKKGY 387
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+ A E EM + PN++T+ LI G CK + +++ + G + +N
Sbjct: 388 LVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNC 447
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I LC+ + +DAL EM G P+ T+N LI LC + +L L++ M +
Sbjct: 448 LIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEG 507
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK-------- 442
+ + T+N LI +F R+ I++A+K M G DN +Y+ LIKAL K
Sbjct: 508 VIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCL 567
Query: 443 ---------------------------SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+G+ ++A Q M Q G PD T N ++ L
Sbjct: 568 GLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGL 627
Query: 476 VQQGRFEEAHDIVKTSKERGI 496
+ GRF+EA ++ + +GI
Sbjct: 628 CKMGRFQEALNLFNGLQAKGI 648
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 163/353 (46%), Gaps = 18/353 (5%)
Query: 156 LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCL-VTGLDLNETCGILDTFIKR 214
L+ +L N +L++M D G + + S F + GL T +LD +
Sbjct: 100 LIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVY 159
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGD--RYLNHVFKDRLVSNVN----SYNMVIDCFCKV 268
+P F +Y +++E L V G+ + +VF D L ++ ++ +V+ FC V
Sbjct: 160 CFEPTFKSYNVVLEIL------VAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMV 213
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
N +D A + R+M PN + + LI ++ V++ +LL + G +PD TF
Sbjct: 214 NEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTF 273
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N +I LC+A R +A M+ + + L+ LC +G V + + K+
Sbjct: 274 NDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP- 332
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFF-SMLTLGLRPDNFSYSALIKALIKSGRFD 447
+P+ +N LI + + E+A+ + +M+ G PD F+++ +I L K G
Sbjct: 333 ---NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLV 389
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
A + M + G P+ T ++++ +QG FEEA +V + +G+S +
Sbjct: 390 SALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNT 442
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 115/265 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+S +T YN +I AL K I A + +MS CKPD +T+N LI+G+C+ ++EA
Sbjct: 437 GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEA 496
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L + M G N TY LI F + + + +++ M+ R + T L+
Sbjct: 497 LGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKA 556
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + K L+ + E CN L+ ++A LR M RG P+
Sbjct: 557 LCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPD 616
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L E + + +G+ P TY L+ G + + L
Sbjct: 617 IVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLF 676
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVN 269
+ + N +++++I+ F K N
Sbjct: 677 KGVSNGFIPNEITWSILINYFVKNN 701
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/496 (28%), Positives = 235/496 (47%), Gaps = 12/496 (2%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+ +I + + A F +++ PD T+N L+HG+C V EAL L QM
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
PNV T+T L++G C R+ E +L+ M E + P + T ++V G+ + D
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 133 KAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
A LL + E + +V + ++ L + S+A + +M ++G P+ T++
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ + ++ +L ++R + P TY L+ A K G+ E + + + +
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+ N +Y+ +ID FCK N +D A + M + +PNL+TFNTLI G+C + E
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
LL + E G D T+N++I ALD L EM+ G+ P+ +T + L+ LC
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Query: 372 AIGDVARSLRLFQKMQADR-----------ISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
G + +L +F+ MQ + + PD+ T+N LI K +AE+ +
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G+ PD +YS++I L K R DEA Q F SM +P+ T ++ + GR
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596
Query: 481 FEEAHDIVKTSKERGI 496
++ ++ RGI
Sbjct: 597 VDDGLELFCEMGRRGI 612
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/502 (26%), Positives = 236/502 (47%), Gaps = 12/502 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + ++ +V+ DL +Q+M Q + D +++ ILI C + AL
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ LG P+V T+ L+ G C RV+E + M E PN T +L++G+ R
Sbjct: 137 FGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY-LPESS 186
+A LL R ME ++ T++ + A +LRKM + + +P
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ + L ++ + ++G+ P TY ++ +GR + ++ L +
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ ++ +V +YN +I+ F K A E+ EM R I PN +T++++I G CK +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ ++ G P+ TFN++ID C A R +D ++ L EM E G+ +T TYN L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL-- 424
I +GD+ +L L Q+M + + PDI T + L+ C K++ A + F M
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Query: 425 ---------GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G+ PD +Y+ LI LI G+F EA++ + M G PD+ T + +++ L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
Query: 476 VQQGRFEEAHDIVKTSKERGIS 497
+Q R +EA + + + S
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFS 578
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 222/489 (45%), Gaps = 12/489 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ + +++ L + I A +M D +P + TY ++ G+C+ G AL L
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNL 241
Query: 68 VKQMEGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+++ME + + PNV Y+ +ID C R ++ + M+E+ + P+ T S++ G
Sbjct: 242 LRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
A +LL +ER+ + N L+ EA + +M RG +P +
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L+ + +G P T+ L++ A R +G L+ +
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ LV++ +YN +I F V ++ A ++ +EM + P++VT +TL+ G C + ++
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 307 HKTRELLVMLLEC-----------GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
E+ ++ + G +PD T+N +I L +F +A + EM G
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ P+TITY+ +I LC + + ++F M + SP++ TF LI +C+ +++
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ F M G+ + +Y LI K G + A F M +G PD+ T +L L
Sbjct: 602 ELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Query: 476 VQQGRFEEA 484
+ + A
Sbjct: 662 WSKEELKRA 670
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 178/383 (46%), Gaps = 26/383 (6%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP YNA+I+A VK A + +M P+ TY+ +I G C+ +D A
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M G +PN+ T+ LIDG+C AKR+ + +L M E + + T +L+HG
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDRGYLPE 184
+ D + A +LL + + C+TLL L +N +A + + M + L
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S F+ GV+P TY +L+ L G+ +E +
Sbjct: 501 SHPFN-------------------------GVEPDVQTYNILISGLINEGKFLEAEELYE 535
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +V + +Y+ +ID CK + +D AT++ M + +PN+VTF TLI+G+CK
Sbjct: 536 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V EL + G + T+ ++I + ALD EM+ GV P+TIT
Sbjct: 596 RVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIR 655
Query: 365 ILIRSLCAIGDVARSLRLFQKMQ 387
++ L + ++ R++ + +K+Q
Sbjct: 656 NMLTGLWSKEELKRAVAMLEKLQ 678
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 194/426 (45%), Gaps = 23/426 (5%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ +Y+A+ID+L K A F +M PD FTYN +I G C G +A
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+L+++M +P+V TY LI+ F + E + + M R + PN T S++ G
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG- 369
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F + A E + M + + L+ NTL+ + +L +M + G + +
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL-------------- 230
++T++ + DLN +L I G+ P T L++ L
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489
Query: 231 --YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
K+ +D++ N V D V +YN++I A E+ EM R I P
Sbjct: 490 VMQKSKKDLDASHPFNGVEPD-----VQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+ +T++++I G CK + + + ++ + F P+ TF ++I+ C+A R +D L+
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
EM G+ N ITY LI +G++ +L +FQ+M + + PD T ++
Sbjct: 605 CEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664
Query: 409 NKIEKA 414
++++A
Sbjct: 665 EELKRA 670
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 182/413 (44%), Gaps = 3/413 (0%)
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
L GF K + + + M P+ L+ V R P L + MER+
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQK-MERK 108
Query: 146 PLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNET 204
+ + T+L + + S A + K+ G P+ TF+ + L ++E
Sbjct: 109 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEA 168
Query: 205 CGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
+ + +P T+ LM L + GR VE L+ + +D L +Y ++D
Sbjct: 169 LNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDG 228
Query: 265 FCKVNMMDRATEICREMRD-RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
CK A + R+M + I PN+V ++ +I CKD + L + E G P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D FT+NSMI C + R+ DA L EM+E + P+ +TYN LI + G + L+
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY 348
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+M I P+ T++++I FC+ N+++ AE F+ M T G P+ +++ LI +
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
R D+ + M + G D+ T N ++ G A D+++ G+
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G+ P + YN +I L+ A +++M PD TY+ +I G+C+ +D
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA ++ M ++PNV T+T LI+G+C A RV + + M R + N T +L+
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
G + + + A ++ + + +L L + A A+L K+
Sbjct: 624 CGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/491 (29%), Positives = 242/491 (49%), Gaps = 1/491 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ +Y+A+ID L K + A Q+ D TYN LI G C +G E
Sbjct: 191 VQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVT 250
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+L+ +M P+ YT+ ILID C R+ E VL +M +R P+ T +L+ G
Sbjct: 251 QLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGY 310
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ H+A EL R ++R L N L+ M EA + +++ ++ +P
Sbjct: 311 CSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTI 370
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
++++ + L ++ +LD P TY +L++AL K GR +E L
Sbjct: 371 ASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVM 430
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ K + N+ +YN ++D +C N ++ A +I M + P+++ +N LI+G+CK
Sbjct: 431 MMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEM 490
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V + L + PD ++NS+ID LC R + L EM + G P+ ITYNI
Sbjct: 491 VDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNI 550
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L+ + C +++ LF+++ + I PD YT +A++ + C+ K++ AE A +L G
Sbjct: 551 LLDAFCKTQPFDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHG 609
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
P+ +Y+ LI AL K G F EA ME N PD+ T +I+ L+Q+ ++A
Sbjct: 610 CSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAE 669
Query: 486 DIVKTSKERGI 496
+ + RG+
Sbjct: 670 KLREEMIARGL 680
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 229/480 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISPS + +I+ + A+ + +P+ T+N +I+G C G++ +A
Sbjct: 85 GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + + GY + +TY LI+G ++ +L+ M++ +V PN +L+ G
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A L + ER L + N+L+ + E +L KM P+
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + L + E G+L KRG KP TY LME E N
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K L +V +YN++ID +CK M+D A + +E+ ++++ P + ++N+LI G C
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ ++LL + PD T+N +ID LC+ R +AL L M++ GV PN +TYN
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYN 444
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++ C +V + +F +M + PDI +N LI +C+ +++A F M
Sbjct: 445 AMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHK 504
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
L PD SY++LI L GR ++ M +G +PD T N++L+ + F++A
Sbjct: 505 NLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKA 564
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 233/493 (47%), Gaps = 1/493 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ +N +I+ + I A Q + D+FTY LI+G+ + G + A
Sbjct: 120 GYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAA 179
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+++ME PN+ Y+ LIDG C V++ + + ER + + T SL+ G
Sbjct: 180 LHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDG 239
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +LL + + N L+ L EA +L M RG P+
Sbjct: 240 CCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPD 299
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + +++E + + +KRG++P Y +L++ K E
Sbjct: 300 IVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFK 359
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ LV + SYN +ID C + ++ EM P++VT+N LI CK+
Sbjct: 360 ELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEG 419
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + +LVM+++ G KP+ T+N+M+D C + A D + MV+ G+ P+ + YN
Sbjct: 420 RILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYN 479
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI C V ++ LF++M+ + PDI ++N+LI C + +I ++ M
Sbjct: 480 VLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDS 539
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G PD +Y+ L+ A K+ FD+A F + + G PD YT++ I++ L + + + A
Sbjct: 540 GQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMA 598
Query: 485 HDIVKTSKERGIS 497
D +K G S
Sbjct: 599 EDALKHLLMHGCS 611
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 228/491 (46%), Gaps = 2/491 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P T +++ ++ A+V+ A F Q+ P T+ ILI+ A L
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ + GY PN+ T+ +I+GFC + + + + + ++ T +L++G+ +
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
A LL + ME+ + LV + L+ L + S+A + ++G+RG L ++
Sbjct: 173 NGQIKAALHLL-QEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + + E +L ++ V P T+ +L++AL K GR +E L +
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K ++ +YN +++ +C + A E+ M R + P+++ +N LI G+CK V
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ L L P ++NS+ID LC + R L EM PP+ +TYNIL
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNIL 411
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I +LC G + +L + M + P+I T+NA++ +C N + A+ F M+ GL
Sbjct: 412 IDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGL 471
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
PD +Y+ LI K+ DEA F M PD + N +++ L GR +
Sbjct: 472 EPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQE 531
Query: 487 IVKTSKERGIS 497
++ + G S
Sbjct: 532 LLDEMCDSGQS 542
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 79/196 (40%), Gaps = 35/196 (17%)
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
CR +DA+ C + MV PP T ++ L+ ++ +G ++ LF ++Q+ ISP I
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 396 -----------------------------------YTFNALIQSFCRMNKIEKAEKAFFS 420
TFN +I FC I KA +
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+L G D F+Y LI L K+G+ A ME++ P+ + +++ L + G
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 481 FEEAHDIVKTSKERGI 496
+A + ERGI
Sbjct: 211 VSDALGLCSQIGERGI 226
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +A++D L K + +A + + + C P+ TY ILI+ +C+ G EA
Sbjct: 574 GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEA 633
Query: 65 LRLVKQMEGLGYAPNVYTYTILI 87
+ L+ +ME P+ T+ I+I
Sbjct: 634 MLLLSKMEDNDRPPDAITFEIII 656
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/496 (28%), Positives = 235/496 (47%), Gaps = 12/496 (2%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+ +I + + A F +++ PD T+N L+HG+C V EAL L QM
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
PNV T+T L++G C R+ E +L+ M E + P + T ++V G+ + D
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 133 KAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
A LL + E + +V + ++ L + S+A + +M ++G P+ T++
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ + ++ +L ++R + P TY L+ A K G+ E + + + +
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+ N +Y+ +ID FCK N +D A + M + +PNL+TFNTLI G+C + E
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
LL + E G D T+N++I ALD L EM+ G+ P+ +T + L+ LC
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Query: 372 AIGDVARSLRLFQKMQADR-----------ISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
G + +L +F+ MQ + + PD+ T+N LI K +AE+ +
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G+ PD +YS++I L K R DEA Q F SM +P+ T ++ + GR
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596
Query: 481 FEEAHDIVKTSKERGI 496
++ ++ RGI
Sbjct: 597 VDDGLELFCEMGRRGI 612
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/502 (26%), Positives = 236/502 (47%), Gaps = 12/502 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + ++ +V+ DL +Q+M Q + D +++ ILI C + AL
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ LG P+V T+ L+ G C RV+E + M E PN T +L++G+ R
Sbjct: 137 FGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY-LPESS 186
+A LL R ME ++ T++ + A +LRKM + + +P
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ + L ++ + ++G+ P TY ++ +GR + ++ L +
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ ++ +V +YN +I+ F K A E+ EM R I PN +T++++I G CK +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ ++ G P+ TFN++ID C A R +D ++ L EM E G+ +T TYN L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL-- 424
I +GD+ +L L Q+M + + PDI T + L+ C K++ A + F M
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Query: 425 ---------GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G+ PD +Y+ LI LI G+F EA++ + M G PD+ T + +++ L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
Query: 476 VQQGRFEEAHDIVKTSKERGIS 497
+Q R +EA + + + S
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFS 578
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 222/489 (45%), Gaps = 12/489 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ + +++ L + I A +M D +P + TY ++ G+C+ G AL L
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNL 241
Query: 68 VKQMEGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+++ME + + PNV Y+ +ID C R ++ + M+E+ + P+ T S++ G
Sbjct: 242 LRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
A +LL +ER+ + N L+ EA + +M RG +P +
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L+ + +G P T+ L++ A R +G L+ +
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ LV++ +YN +I F V ++ A ++ +EM + P++VT +TL+ G C + ++
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 307 HKTRELLVMLLEC-----------GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
E+ ++ + G +PD T+N +I L +F +A + EM G
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ P+TITY+ +I LC + + ++F M + SP++ TF LI +C+ +++
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ F M G+ + +Y LI K G + A F M +G PD+ T +L L
Sbjct: 602 ELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Query: 476 VQQGRFEEA 484
+ + A
Sbjct: 662 WSKEELKRA 670
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 178/383 (46%), Gaps = 26/383 (6%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP YNA+I+A VK A + +M P+ TY+ +I G C+ +D A
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M G +PN+ T+ LIDG+C AKR+ + +L M E + + T +L+HG
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDRGYLPE 184
+ D + A +LL + + C+TLL L +N +A + + M + L
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S F+ GV+P TY +L+ L G+ +E +
Sbjct: 501 SHPFN-------------------------GVEPDVQTYNILISGLINEGKFLEAEELYE 535
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +V + +Y+ +ID CK + +D AT++ M + +PN+VTF TLI+G+CK
Sbjct: 536 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V EL + G + T+ ++I + ALD EM+ GV P+TIT
Sbjct: 596 RVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIR 655
Query: 365 ILIRSLCAIGDVARSLRLFQKMQ 387
++ L + ++ R++ + +K+Q
Sbjct: 656 NMLTGLWSKEELKRAVAMLEKLQ 678
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 194/426 (45%), Gaps = 23/426 (5%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ +Y+A+ID+L K A F +M PD FTYN +I G C G +A
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+L+++M +P+V TY LI+ F + E + + M R + PN T S++ G
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG- 369
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F + A E + M + + L+ NTL+ + +L +M + G + +
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL-------------- 230
++T++ + DLN +L I G+ P T L++ L
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489
Query: 231 --YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
K+ +D++ N V D V +YN++I A E+ EM R I P
Sbjct: 490 VMQKSKKDLDASHPFNGVEPD-----VQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+ +T++++I G CK + + + ++ + F P+ TF ++I+ C+A R +D L+
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
EM G+ N ITY LI +G++ +L +FQ+M + + PD T ++
Sbjct: 605 CEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664
Query: 409 NKIEKA 414
++++A
Sbjct: 665 EELKRA 670
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 182/413 (44%), Gaps = 3/413 (0%)
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
L GF K + + + M P+ L+ V R P L + MER+
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQK-MERK 108
Query: 146 PLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNET 204
+ + T+L + + S A + K+ G P+ TF+ + L ++E
Sbjct: 109 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEA 168
Query: 205 CGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
+ + +P T+ LM L + GR VE L+ + +D L +Y ++D
Sbjct: 169 LNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDG 228
Query: 265 FCKVNMMDRATEICREMRD-RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
CK A + R+M + I PN+V ++ +I CKD + L + E G P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D FT+NSMI C + R+ DA L EM+E + P+ +TYN LI + G + L+
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY 348
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+M I P+ T++++I FC+ N+++ AE F+ M T G P+ +++ LI +
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
R D+ + M + G D+ T N ++ G A D+++ G+
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G+ P + YN +I L+ A +++M PD TY+ +I G+C+ +D
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA ++ M ++PNV T+T LI+G+C A RV + + M R + N T +L+
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
G + + + A ++ + + +L L + A A+L K+
Sbjct: 624 CGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/496 (28%), Positives = 235/496 (47%), Gaps = 12/496 (2%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N +I + + A F +++ PD T+ L+HG+C V EAL L QM
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMF 176
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
PNV T+T L++G C R+ E +L+ M E + P + T ++V G+ + D
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 133 KAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
A LL + E + +V + ++ L + S+A + +M ++G P+ T++
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ + ++ +L ++R + P TY L+ A K G+ E + + + +
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+ N +Y+ +ID FCK N +D A + M + +PNL+TFNTLI G+C + E
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
LL + E G D T+N++I ALD L EM+ G+ P+ +T + L+ LC
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Query: 372 AIGDVARSLRLFQKMQADR-----------ISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
G + +L +F+ MQ + + PD+ T+N LI K +AE+ +
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G+ PD +YS++I L K R DEA Q F SM +P+ T ++ + GR
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596
Query: 481 FEEAHDIVKTSKERGI 496
++ ++ RGI
Sbjct: 597 VDDGLELFCEMGRRGI 612
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/502 (27%), Positives = 238/502 (47%), Gaps = 12/502 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + ++ +V+ DL +Q+M Q + D +++NILI C + AL
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ LG P+V T+T L+ G C RV+E + M E PN T +L++G+ R
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY-LPESS 186
+A LL R ME ++ T++ + A +LRKM + + +P
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ + L ++ + ++G+ P TY ++ +GR + ++ L +
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ ++ +V +YN +I+ F K A E+ EM R I PN +T++++I G CK +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ ++ G P+ TFN++ID C A R +D ++ L EM E G+ +T TYN L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL-- 424
I +GD+ +L L Q+M + + PDI T + L+ C K++ A + F M
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Query: 425 ---------GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G+ PD +Y+ LI LI G+F EA++ + M G PD+ T + +++ L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
Query: 476 VQQGRFEEAHDIVKTSKERGIS 497
+Q R +EA + + + S
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFS 578
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 222/489 (45%), Gaps = 12/489 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ + +++ L + I A +M D +P + TY ++ G+C+ G AL L
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNL 241
Query: 68 VKQMEGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+++ME + + PNV Y+ +ID C R ++ + M+E+ + P+ T S++ G
Sbjct: 242 LRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
A +LL +ER+ + N L+ EA + +M RG +P +
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L+ + +G P T+ L++ A R +G L+ +
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ LV++ +YN +I F V ++ A ++ +EM + P++VT +TL+ G C + ++
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 307 HKTRELLVMLLEC-----------GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
E+ ++ + G +PD T+N +I L +F +A + EM G
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ P+TITY+ +I LC + + ++F M + SP++ TF LI +C+ +++
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ F M G+ + +Y LI K G + A F M +G PD+ T +L L
Sbjct: 602 ELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Query: 476 VQQGRFEEA 484
+ + A
Sbjct: 662 WSKEELKRA 670
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 178/383 (46%), Gaps = 26/383 (6%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP YNA+I+A VK A + +M P+ TY+ +I G C+ +D A
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M G +PN+ T+ LIDG+C AKR+ + +L M E + + T +L+HG
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDRGYLPE 184
+ D + A +LL + + C+TLL L +N +A + + M + L
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S F+ GV+P TY +L+ L G+ +E +
Sbjct: 501 SHPFN-------------------------GVEPDVQTYNILISGLINEGKFLEAEELYE 535
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +V + +Y+ +ID CK + +D AT++ M + +PN+VTF TLI+G+CK
Sbjct: 536 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V EL + G + T+ ++I + ALD EM+ GV P+TIT
Sbjct: 596 RVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIR 655
Query: 365 ILIRSLCAIGDVARSLRLFQKMQ 387
++ L + ++ R++ + +K+Q
Sbjct: 656 NMLTGLWSKEELKRAVAMLEKLQ 678
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 194/426 (45%), Gaps = 23/426 (5%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ +Y+A+ID+L K A F +M PD FTYN +I G C G +A
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+L+++M +P+V TY LI+ F + E + + M R + PN T S++ G
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG- 369
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F + A E + M + + L+ NTL+ + +L +M + G + +
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL-------------- 230
++T++ + DLN +L I G+ P T L++ L
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489
Query: 231 --YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
K+ +D++ N V D V +YN++I A E+ EM R I P
Sbjct: 490 VMQKSKKDLDASHPFNGVEPD-----VQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+ +T++++I G CK + + + ++ + F P+ TF ++I+ C+A R +D L+
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
EM G+ N ITY LI +G++ +L +FQ+M + + PD T ++
Sbjct: 605 CEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664
Query: 409 NKIEKA 414
++++A
Sbjct: 665 EELKRA 670
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G+ P + YN +I L+ A +++M PD TY+ +I G+C+ +D
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA ++ M ++PNV T+T LI+G+C A RV + + M R + N T +L+
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
G + + + A ++ + + +L L + A A+L K+
Sbjct: 624 CGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/492 (28%), Positives = 232/492 (47%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGI P+ +N VI N A M C PD TYN ++ +C+ G + +
Sbjct: 202 LGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGD 261
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+ M+ G PN TY IL+ G+C + E V+E+M + N+ P+ T L++
Sbjct: 262 ARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLIN 321
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ +AF+L + L + NTL+ S SEA +L +M ++G P
Sbjct: 322 GLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKP 381
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T + V +++ + + G P TY L+ KAG E R +
Sbjct: 382 NAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTM 441
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + + + + N ++ C+ ++ A ++ R R + V++ TLI G+ KD
Sbjct: 442 DEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKD 501
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V + +L + E P T+N +I LC+ + E A+ L+E++E G+ P+ TY
Sbjct: 502 GNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTY 561
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N ++ C GDV ++ + KM + PD++T N L++ C +EKA K F + ++
Sbjct: 562 NTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVS 621
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G D +Y+ LI +L K GR D+A ME+ PD YT N I+ L GR E
Sbjct: 622 KGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIRE 681
Query: 484 AHDIVKTSKERG 495
A + + E+G
Sbjct: 682 AEEFMSKMLEKG 693
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 139/514 (27%), Positives = 246/514 (47%), Gaps = 23/514 (4%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP YN ++DAL K + A M P+R TYNIL++G C++G + EA
Sbjct: 240 SPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAAN 299
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+++ M P+V+TY +LI+G CN R+ E F++ + M+ + P+ + +L++G
Sbjct: 300 VIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCL 359
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+AF+LL E+ + N ++ +A+ + KM + G+ P+
Sbjct: 360 EWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCV 419
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + ++ E +D ++ +K T ++ L + + E + L+
Sbjct: 420 TYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSA 479
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K + SY +I + K +DRA ++ EM++++I P+ VT+N +I G C+ +
Sbjct: 480 RKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKT 539
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ L LLE G PD+ T+N+++ CR E A ++MVE P+ T NIL
Sbjct: 540 EQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNIL 599
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+R LC G + ++L+LF + + D T+N LI S C+ +++ A M L
Sbjct: 600 LRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKEL 659
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV---------- 476
PD+++Y+A+I AL SGR EA++ M + G P ET+V
Sbjct: 660 GPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDS 719
Query: 477 -------------QQGRFEEAHDIVKTSKERGIS 497
+G++++A I SK++GI+
Sbjct: 720 SSVAYSEWIKELCTEGKYKDAMRIFGESKQKGIT 753
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/491 (23%), Positives = 208/491 (42%), Gaps = 38/491 (7%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGL---------------------------- 74
P + + I + G A ++ K+M+ L
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192
Query: 75 ----------GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
G PNV T+ I+I G+C + + L +M + N P+ T +++
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A +LL+ R L + N L+Y EAA ++ M LP+
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L + E + D + P +Y L+ + + E + L
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + N ++N+++ +CK MD A+ +M + +P+ VT+NTLI+G+CK
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + + K D T N+++ LCR + E+A LS + G + ++Y
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYG 492
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI G+V R+L+L+ +M+ I P T+N +I C+ K E+A +L
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES 552
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL PD +Y+ ++ + G ++A Q M +N PD +T N++L L +G E+A
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKA 612
Query: 485 HDIVKTSKERG 495
+ T +G
Sbjct: 613 LKLFNTWVSKG 623
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 206/434 (47%), Gaps = 31/434 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L + P YN +I+ ++ + I A+ ++MS KP+ T+NI++ C+ G +D+
Sbjct: 342 LKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDD 401
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + +ME G++P+ TY LI+G+C A + E FR ++ M +N+ + T+ +++
Sbjct: 402 ASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILR 461
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ R +A++LL +R ++ TL+ + A + +M ++ +P
Sbjct: 462 TLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIP 521
Query: 184 ESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
+ T++ C++ GL + L+ ++ G+ P +TY ++ + G +
Sbjct: 522 STVTYN----CIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKA 577
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
++ N + ++ +V + N+++ C M+++A ++ + A + VT+NTLI+
Sbjct: 578 FQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITS 637
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP- 358
CK+ + LL + E PD +T+N++I L + R +A + +S+M+E G P
Sbjct: 638 LCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPX 697
Query: 359 ----------------------NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
+++ Y+ I+ LC G ++R+F + + I+ D
Sbjct: 698 QVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKS 757
Query: 397 TFNALIQSFCRMNK 410
T+ L+ + K
Sbjct: 758 TYINLMDGLIKRRK 771
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 115/212 (54%)
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
I PN+ TFN +I G+C + + E L ++ + PD T+N+++D LC+ R DA
Sbjct: 204 IVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDAR 263
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
D L +M G+ PN TYNIL+ C +G + + + + M + + PD++T+N LI
Sbjct: 264 DLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGL 323
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
C +IE+A K M L L PD SY+ LI ++ + EA + M + G P++
Sbjct: 324 CNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNA 383
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T N++++ ++G+ ++A + + +E G S
Sbjct: 384 VTHNIMVKWYCKEGKMDDASNTITKMEESGFS 415
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 102/255 (40%), Gaps = 23/255 (9%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I PST YN +I L + + A K ++ PD TYN ++HG CR G V++A
Sbjct: 519 IIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAF 578
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ +M + P+V+T IL+ G C + + ++ + + T +L+ +
Sbjct: 579 QFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSL 638
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ AF LL E+E N ++ L+++ EA + KM ++G LP
Sbjct: 639 CKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQ 698
Query: 186 S-----------------------TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+ + L T + I ++G+ ST
Sbjct: 699 VLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKST 758
Query: 223 YLLLMEALYKAGRDV 237
Y+ LM+ L K + +
Sbjct: 759 YINLMDGLIKRRKSI 773
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 241/497 (48%), Gaps = 3/497 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y +++A+ +++ + A +M C P+ TYN++I+G+CR G VD+A
Sbjct: 173 GCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 232
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ ++ G+ P+ +YT L+ G C +KR +V + M E+N PNE T L+
Sbjct: 233 RELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRF 292
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R +A ++L + E T +CN ++ + +A +L MG G P+
Sbjct: 293 FCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPD 352
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ + L ++ +L+ ++ P T+ + L + G + +
Sbjct: 353 TISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIE 412
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + V +YN +++ FC +D A E+ R M + PN +T+ TL++G C
Sbjct: 413 QMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAE 469
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ EL+ +L P+ TFN ++ C+ E+A++ + +M+E G PN ITYN
Sbjct: 470 RLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYN 529
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ + +L L + + +SPD+ TF+++I + ++IE+A + F + +
Sbjct: 530 TLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDI 589
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+RP Y+ ++ L K D A F M NGC P+ T +++E L +G +EA
Sbjct: 590 GMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEA 649
Query: 485 HDIVKTSKERGISFKSF 501
D++ RG+ K+
Sbjct: 650 QDLLSVLCSRGVLNKNL 666
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 212/454 (46%), Gaps = 41/454 (9%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D F YN L+ G CR G +D A RL+ M AP+ YTYT LI C+ RVA+ +L
Sbjct: 110 DVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLL 166
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
+ M R PN T L+ + R N
Sbjct: 167 DDMLRRGCQPNVVTYTVLLEAMCR-----------------------------------N 191
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
S +A A+L +M +G P T++ + + +++ +L+ G +P +Y
Sbjct: 192 SGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSY 251
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
L++ L + R + + + + + N +++M+I FC+ M++RA ++ +M +
Sbjct: 252 TTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTE 311
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
A N N +I+ CK V +LL + G PD ++ +++ LCRA R++D
Sbjct: 312 HGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDD 371
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A + L+EMV PPN +T+N I LC G + +++ L ++M + + T+NAL+
Sbjct: 372 AKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVN 431
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
FC I+ A + F SM +P+ +Y+ L+ L + R D A + M + C P
Sbjct: 432 GFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPP 488
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ T N+++ Q+G EEA ++V+ E G +
Sbjct: 489 NVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCT 522
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 175/346 (50%), Gaps = 3/346 (0%)
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
+C L+ L S+AA +LR G + ++ V L+ ++ +
Sbjct: 78 LCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM 137
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
V P TY L+ L GR + L+ + + NV +Y ++++ C+ +
Sbjct: 138 ---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGF 194
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
++A + EMR + PN+VT+N +I+G C++ V RELL L GF+PD ++ ++
Sbjct: 195 EQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTL 254
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
+ LC + R++D + +EM+E PN +T+++LIR C G V R++++ ++M
Sbjct: 255 LKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGC 314
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
+ + N +I S C+ +++ A K M + G PD SY+ ++K L ++ R+D+AK+
Sbjct: 315 ATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKE 374
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M +N C P+ T N + L Q+G E+A +++ E G +
Sbjct: 375 LLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCT 420
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 194/430 (45%), Gaps = 7/430 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T Y ++ L S D F +M C P+ T+++LI CR G+V+ A
Sbjct: 243 GFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERA 302
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++++QM G A N I+I+ C RV + F++L M P+ + +++ G
Sbjct: 303 IQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKG 362
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R A ELL + ++ NT + L + +A ++ +M + G
Sbjct: 363 LCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVG 422
Query: 185 SSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
T++ V C+ +D L+ F KP TY L+ L A R
Sbjct: 423 VVTYNALVNGFCVQGHID-----SALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAEL 477
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + + NV ++N+++ FC+ ++ A E+ +M + PNL+T+NTL+ G K
Sbjct: 478 VAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITK 537
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
D ELL L+ G PD TF+S+I L + R E+A+ + + G+ P +
Sbjct: 538 DCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVV 597
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN ++ LC ++ ++ F M ++ P+ T+ LI+ +++A+ +
Sbjct: 598 YNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLC 657
Query: 423 TLGLRPDNFS 432
+ G+ N +
Sbjct: 658 SRGVLNKNLT 667
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P +YN ++ L K ID A F M + C P+ TY ILI G+ G++ E
Sbjct: 589 IGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKE 648
Query: 64 ALRLVK 69
A L+
Sbjct: 649 AQDLLS 654
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/499 (28%), Positives = 241/499 (48%), Gaps = 6/499 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P Y+++I AL K+ ++D A M + PD TYN ++HG C G EA
Sbjct: 231 GILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 290
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +K+M G PNV TY+ L++ C R E ++ + M +R + P+ AT R+L+ G
Sbjct: 291 IGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQG 350
Query: 125 VFR---CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++ H +L++R +P V N L+ + +A + KM G
Sbjct: 351 YATKGALVEMHALLDLMVR-NGIQP--DHHVFNILICAYAKQEKVDQAMLVFSKMRQHGL 407
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P + + L +++ + I G+ P Y L+ L + + +
Sbjct: 408 NPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEE 467
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + + N +N +ID CK + + ++ M + P+++T+NTLI G C
Sbjct: 468 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCC 527
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
++ + +LL ++ G KPD T+ ++I+ CR R +DAL EMV GV PN I
Sbjct: 528 LAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNII 587
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYNI+++ L A + L+ + ++ T+N ++ C+ N ++A + F ++
Sbjct: 588 TYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
L+ + +++ +I AL+K GR DEAK F + NG PD T +L+ E L++QG
Sbjct: 648 CLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSL 707
Query: 482 EEAHDIVKTSKERGISFKS 500
EE D+ + +E G S S
Sbjct: 708 EELDDLFLSMEENGCSADS 726
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 232/480 (48%), Gaps = 6/480 (1%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM---EGLGYAPN 79
S+++D+ + ++ C PD F+YN L+ G+C EAL L+ M G G P+
Sbjct: 144 SDAMDIVLRRMTELG---CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPD 200
Query: 80 VYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLI 139
V +Y +++GF + + M +R + P+ T S++ + + KA E+L
Sbjct: 201 VVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLN 260
Query: 140 RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL 199
++ + + N++L+ ++ EA L+KM G P T+ + L
Sbjct: 261 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNG 320
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
E I D+ KRG++P +TY L++ G VE L+ + ++ + + + +N
Sbjct: 321 RSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFN 380
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
++I + K +D+A + +MR + PN+V + T+I CK V +++
Sbjct: 381 ILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDE 440
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G P+ + S+I LC +++ A + + EM++ G+ NTI +N +I S C G V S
Sbjct: 441 GLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 500
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+LF M + PDI T+N LI C K+++A K SM+++G++PD +Y LI
Sbjct: 501 EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLING 560
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
+ R D+A F M +G +P+ T N+IL+ L R A ++ + + G +
Sbjct: 561 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLE 620
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/495 (23%), Positives = 227/495 (45%), Gaps = 39/495 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P+ Y +I ++ +DL + + + D T+ L+ G+C +A+
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 66 RLV-KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER---NVCPNEATVRSL 121
+V ++M LG P+V++Y L+ G C+ R E +L +M + P+ + ++
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++G F+ D KA+ + +M DRG
Sbjct: 208 LNGFFKEGDSDKAY-----------------------------------STYHEMLDRGI 232
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
LP+ T+ + L +++ +L+T +K GV P TY ++ +G+ E
Sbjct: 233 LPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 292
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + D + NV +Y+ +++ CK A +I M R + P++ T+ TL+ G+
Sbjct: 293 TLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYA 352
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ + LL +++ G +PD FN +I + + + A+ S+M + G+ PN +
Sbjct: 353 TKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVV 412
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y +I LC G V ++ F++M + ++P+I + +LI C +K +KAE+ M
Sbjct: 413 CYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEM 472
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
L G+ + ++++I + K GR E+++ F M + G PD T N +++ G+
Sbjct: 473 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKM 532
Query: 482 EEAHDIVKTSKERGI 496
+EA ++ + G+
Sbjct: 533 DEATKLLASMVSVGV 547
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 167/347 (48%), Gaps = 9/347 (2%)
Query: 160 LSNNSMASEAAAILR-----KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
L++ + S AAA+ R + G P T+ + C L+ L +K+
Sbjct: 62 LADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKK 121
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G + T+ L++ L R + D L + + + +V SYN ++ C N
Sbjct: 122 GFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQE 181
Query: 274 ATEICREM---RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
A E+ M R P++V++NT+++G K+ + K +L+ G PD T++S
Sbjct: 182 ALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSS 241
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I LC+A + A++ L+ MV+ GV P+ +TYN ++ C+ G ++ +KM++D
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG 301
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ P++ T+++L+ C+ + +A K F SM GL PD +Y L++ G E
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMH 361
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M +NG PD + N+++ +Q + ++A + ++ G++
Sbjct: 362 ALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLN 408
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 92/231 (39%), Gaps = 35/231 (15%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P YN +ID + +D A M KPD TY LI+G CR+ +D+
Sbjct: 510 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD 569
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L K+M G +PN+ TY I++ G + +R A
Sbjct: 570 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA-------------------------- 603
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
A EL + + + N +L+ L N++ EA + + +
Sbjct: 604 ---------AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 654
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
E+ TF+ + L+ ++E + G+ P TY L+ E L + G
Sbjct: 655 ETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQG 705
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 213/435 (48%), Gaps = 40/435 (9%)
Query: 14 NAVIDALVKSNSI-DLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
N ++ ALVK N I D+ Y+ +++M + + T+NI I+G+CR G +++A ++ M+
Sbjct: 169 NPLLSALVKENKIGDVEYV-YKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMK 227
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE---RNVCPNEATVRSLVHGVFRCL 129
G +PNV TY L+DG+C ++++ MKE +CPNE T +L+ G C
Sbjct: 228 AWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGF--CK 285
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
D + A A +M +G P T++
Sbjct: 286 DENVA---------------------------------AAKKAFEEMQKQGLKPNIVTYN 312
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
+ L L E + D + G+KP TY L+ K E + + V K
Sbjct: 313 SLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQ 372
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
LV NV ++N +ID +CK MM+ +C M D I PN+ T+N LI+G C+ ++
Sbjct: 373 ELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAA 432
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+ELL + G K D T+N +ID LC+ + +A L+EM G+ PN +TYN L+
Sbjct: 433 KELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDG 492
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
C G + +L + +M+ +R P++ T+N LI+ +C++NK+E A ML GL P+
Sbjct: 493 YCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPN 552
Query: 430 NFSYSALIKALIKSG 444
+Y + +++ G
Sbjct: 553 RTTYDIVRLEMLEKG 567
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 184/415 (44%), Gaps = 38/415 (9%)
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
LV + L+ H A+E R + CN LL L + + + ++M R
Sbjct: 136 LVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRR 195
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK---AGRDV 237
+TF+ + L LN+ ++ G+ P TY L++ K AG+
Sbjct: 196 IHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMY 255
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ + ++ + +++ N ++N +ID FCK + A + EM+ + + PN+VT+N+LI
Sbjct: 256 KAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLI 315
Query: 298 SGHCKDAEVHKTRELLVMLLECGFK----------------------------------- 322
+G C + ++ + +L ++ G K
Sbjct: 316 NGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELV 375
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P+ TFN+MID C+ E+ S M++ G+ PN TYN LI LC D+ + L
Sbjct: 376 PNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKEL 435
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
+M+ + D+ T+N LI C+ +K AEK M LGL+P++ +Y+ L+
Sbjct: 436 LNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCM 495
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G+ A ME+ P+ T N++++ + + E A+ ++ E+G++
Sbjct: 496 EGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLN 550
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 204/468 (43%), Gaps = 46/468 (9%)
Query: 19 ALVKSNSIDLAYLKFQ-------QMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
A VK+ + AY F ++S+ C P L+ + + + + + K+M
Sbjct: 139 AYVKNLELHCAYEAFTRAKDYGFKLSLTSCNP-------LLSALVKENKIGDVEYVYKEM 191
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
N+ T+ I I+G C A ++ + +E MK + PN T +LV G +
Sbjct: 192 IKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSA 251
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
K ++ A A +++M P TF+
Sbjct: 252 GKMYK--------------------------------AEAFMKEMLANKICPNEVTFNTL 279
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ ++ + K+G+KP TY L+ L G+ E + + L
Sbjct: 280 IDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGL 339
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
N+ +YN +I+ FCK MM AT++ ++ +++ PN++TFNT+I +CK+ + +
Sbjct: 340 KPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFS 399
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
L +L+ G P+ T+N +I LCR + A + L+EM G+ + +TYNILI LC
Sbjct: 400 LCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLC 459
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
+ +L +M + P+ T+N L+ +C K++ A M +P+
Sbjct: 460 KNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVV 519
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+Y+ LIK K + + A M + G NP+ T +++ ++++G
Sbjct: 520 TYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKG 567
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 153/328 (46%), Gaps = 43/328 (13%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ +N +ID K ++ A F++M KP+ TYN LI+G+C G ++EA+
Sbjct: 269 ICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAI 328
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L +M GLG PN+ TY LI+GFC K + E +V + + ++ + PN
Sbjct: 329 DLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPN----------- 377
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+I F NT++ M E ++ M D G LP
Sbjct: 378 ------------VITF------------NTMIDAYCKEGMMEEGFSLCSSMLDEGILPNV 413
Query: 186 STFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
ST++ CL+ GL DL +L+ +G+K TY +L++ L K + ++
Sbjct: 414 STYN----CLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEK 469
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
LN +F L N +YN ++D +C + A + M PN+VT+N LI G+C
Sbjct: 470 LLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYC 529
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFN 329
K ++ LL +LE G P++ T++
Sbjct: 530 KINKLEAANGLLNEMLEKGLNPNRTTYD 557
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 136/321 (42%), Gaps = 53/321 (16%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN++I+ L + ++ A + +M KP+ TYN LI+G C+ ++ EA
Sbjct: 303 GLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEA 362
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ + PNV T+ +ID +C + E F + M + + PN +T L+ G
Sbjct: 363 TKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAG 422
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ R D A ELL ME + L +V N L+ L N + A +L +M
Sbjct: 423 LCRKQDLQAAKELLNE-MENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEM------- 474
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
G+KP TY LM+ G+
Sbjct: 475 ----------------------------FNLGLKPNHVTYNTLMDGYCMEGKLKAALNVR 506
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ K+R NV +YN++I +CK+N ++ A + EM ++ + PN T++
Sbjct: 507 TRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDI-------- 558
Query: 304 AEVHKTRELLVMLLECGFKPD 324
+ + +LE GF PD
Sbjct: 559 --------VRLEMLEKGFSPD 571
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 102/241 (42%), Gaps = 2/241 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ YNA+I+ K + A F +S + P+ T+N +I C+ G+++E
Sbjct: 337 LGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEE 396
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L M G PNV TY LI G C + + +L M+ + + + T L+
Sbjct: 397 GFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILID 456
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + A +LL + NTL+ A + +M P
Sbjct: 457 GLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQP 516
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY-LLLMEALYKA-GRDVEGDR 241
T++ + L G+L+ +++G+ P +TY ++ +E L K D+EG
Sbjct: 517 NVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGFSPDIEGHL 576
Query: 242 Y 242
Y
Sbjct: 577 Y 577
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 135/494 (27%), Positives = 236/494 (47%), Gaps = 3/494 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P Y VI A K + + +M +CKP+ FTYN I G+C+ G VDEAL
Sbjct: 238 IVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEAL 296
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ K M G P+ +TYT+L+DGFC KR E + E M + PN T +L+ G
Sbjct: 297 EVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGF 356
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ + +A + + R + N ++ ++ ++A ++ +M G P++
Sbjct: 357 IKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDT 416
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + + D+ + C +L R + P TY +L+ L + + + L+
Sbjct: 417 WTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQ 476
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++ + NV Y +I + + + + A E+ + M + P+L +N LI G C+ +
Sbjct: 477 MIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKK 536
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V + + LLV + E G KP+ T+ + I+ ++ + A +M+ G+ PN + Y I
Sbjct: 537 VEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTI 596
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI+ C +G+ +L F+ M + PDI ++A+I S + K ++A F L G
Sbjct: 597 LIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTG 656
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE--TLVQQGRFEE 483
+ PD F Y++LI K G ++A Q + M NG NP+ N ++ + G E
Sbjct: 657 VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTE 716
Query: 484 AHDIVKTSKERGIS 497
A + +GIS
Sbjct: 717 AFKLFDEMISKGIS 730
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 146/568 (25%), Positives = 237/568 (41%), Gaps = 79/568 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++D K A L F+ M P+RFTY LI G + G ++EA
Sbjct: 306 GLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEA 365
Query: 65 LRLVKQM--EGL---------------------------------GYAPNVYTYTILIDG 89
LR+ +M GL G P+ +TY +LIDG
Sbjct: 366 LRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDG 425
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
+ + +A+ +L MK R + P+ T L+ G+ D KA E+L + +
Sbjct: 426 YLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPN 485
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL----DLNETC 205
+ TL+ S A +L+ M G LP+ + CL+ GL + E
Sbjct: 486 VFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDL----FCYNCLIIGLCRAKKVEEAK 541
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
+L ++G+KP TY + K+G +RY + +V N Y ++I
Sbjct: 542 MLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGH 601
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C V A + M ++ + P++ ++ +I K+ + + + + L+ G PD
Sbjct: 602 CDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDV 661
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR--SLCAIGDVARSLRLF 383
F +NS+I C+ E A EM+ G+ PN + YN LI C G++ + +LF
Sbjct: 662 FLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLF 721
Query: 384 QKMQADRISPDIY----------------------------------TFNALIQSFCRMN 409
+M + ISPD Y FN+LI SFC+
Sbjct: 722 DEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHG 781
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
K+ +A + F M+ L P+ +Y+ LI A K+ +EA+Q FL ME P++ T
Sbjct: 782 KVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYT 841
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGIS 497
+L + Q G + + K + RGI+
Sbjct: 842 SLLLSYNQIGNRFKMISLFKDMEARGIA 869
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 133/501 (26%), Positives = 227/501 (45%), Gaps = 11/501 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P T YN +ID +KS+ + A +M + P FTY++LI G+C + +A
Sbjct: 411 GIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKA 470
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ QM G PNV+ Y LI + R +L+IM V P+ L+ G
Sbjct: 471 NEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIG 530
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R +A LL+ E+ + S + A + M G +P
Sbjct: 531 LCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPN 590
Query: 185 SSTFDYTVTCLVTG-LDLNETCGILDTF---IKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ + T L+ G D+ T L TF +++G+ P Y ++ +L K G+ E
Sbjct: 591 NVIY----TILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS-- 298
K +V +V YN +I FCK +++A+++ EM I PN+V +NTLI+
Sbjct: 647 GVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDY 706
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G+CK + + +L ++ G PD + + +ID + E AL E + V
Sbjct: 707 GYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGS 766
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ +N LI S C G V + LF M +++P+I T+ LI ++ + +E+AE+ F
Sbjct: 767 LS-AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLF 825
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M T + P+ +Y++L+ + + G + F ME G D+ ++ ++
Sbjct: 826 LDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKE 885
Query: 479 GRFEEAHDIVKTSKERGISFK 499
G+ EA ++ S GI +
Sbjct: 886 GKSLEALKLLNKSLVEGIKLE 906
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 215/493 (43%), Gaps = 3/493 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ +Y +I A V+ + ++A + M + PD F YN LI G+CR V+EA
Sbjct: 481 GVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEA 540
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G PN +TY I+ + + + R + M + PN L+ G
Sbjct: 541 KMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKG 600
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +E+ + + +++ LS N EA + K G +P+
Sbjct: 601 HCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPD 660
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME--ALYKAGRDVEGDRY 242
++ ++ D+ + + D + G+ P Y L+ K+G E +
Sbjct: 661 VFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKL 720
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + + + Y ++ID K +++A + E + + + +L FN+LI CK
Sbjct: 721 FDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCK 779
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+V + REL +++ P+ T+ +ID +A E+A +M + PNT+T
Sbjct: 780 HGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLT 839
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y L+ S IG+ + + LF+ M+A I+ D + + ++C+ K +A K L
Sbjct: 840 YTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSL 899
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G++ ++ + ALI L K + + M + + S T N +L + G +
Sbjct: 900 VEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNED 959
Query: 483 EAHDIVKTSKERG 495
EA ++ + G
Sbjct: 960 EASKVLGVMQRLG 972
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 188/449 (41%), Gaps = 15/449 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ Y A I+ KS I +A F+ M P+ Y ILI G C +G EA
Sbjct: 551 GIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEA 610
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L K M G P++ Y+ +I + E V + V P+ SL+ G
Sbjct: 611 LSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISG 670
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL--YRLSNNSMASEAAAILRKMGDRGYL 182
+ D KA +L + +V NTL+ Y + +EA + +M +G
Sbjct: 671 FCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGIS 730
Query: 183 PESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
P+ Y L+ G +L + + ++ V S + L+++ K G+ +E
Sbjct: 731 PDG----YIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIE 785
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + +L N+ +Y ++ID + K MM+ A ++ +M R+I PN +T+ +L+
Sbjct: 786 ARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLL 845
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
+ + K L + G D + M C+ + +AL L++ + G+
Sbjct: 846 SYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKL 905
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
++ LI LC ++ L L +M + +S T N L+ F + ++A K
Sbjct: 906 EDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVL 965
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFD 447
M LG P + S + I +GR D
Sbjct: 966 GVMQRLGWVPTSLS----LTDSISTGRDD 990
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 125/236 (52%), Gaps = 3/236 (1%)
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV-MLLECGFKPDK 325
K NMM ++ M + I P++ T+ +I HCK +V K + +L M EC KP+
Sbjct: 219 KANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC--KPNL 276
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
FT+N+ I LC+ ++AL+ M+E G+ P+ TY +L+ C + +F+
Sbjct: 277 FTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFES 336
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M + ++P+ +T+ ALI F + IE+A + M+T GL+ + +Y+A+I + K+G
Sbjct: 337 MPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGE 396
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+A F M G PD++T NL+++ ++ +A +++ K R ++ F
Sbjct: 397 MAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPF 452
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C +H+ +L LL+ P + ++D L R +R E+G N
Sbjct: 131 CNSGLIHQADNMLEKLLQTRKPPLE-----ILDSLVRCYR------------EFG-GSNL 172
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
++I I +G + + +F ++ P + N L++ + N + K + S
Sbjct: 173 TVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGS 232
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ + PD ++Y+ +IKA K G + K ME+ C P+ +T N + L Q G
Sbjct: 233 MVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGA 291
Query: 481 FEEAHDIVKTSKERGIS 497
+EA ++ K E+G+
Sbjct: 292 VDEALEVKKLMMEKGLG 308
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 144/491 (29%), Positives = 242/491 (49%), Gaps = 1/491 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ +Y+A+ID L K + A Q+ D TYN LI G C +G E
Sbjct: 191 VQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVT 250
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+L+ +M P+ YT+ ILID C R+ E VL +M +R P+ T +L+ G
Sbjct: 251 QLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGY 310
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ H+A EL R ++R L N L+ M EA + +++ ++ +P
Sbjct: 311 CSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTI 370
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
++++ + L ++ +LD P TY +L++AL K GR +E L
Sbjct: 371 ASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVM 430
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ K + N+ +YN ++D +C N ++ A +I M + P+++ +N LI+G+CK
Sbjct: 431 MMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEM 490
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V + L + PD ++NS+ID LC R + L EM + G P+ ITYNI
Sbjct: 491 VDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNI 550
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L+ + C +++ LF+++ + I PD YT +A++ + C+ K++ AE A +L G
Sbjct: 551 LLDAFCKTQPFDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHG 609
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
P+ +Y+ LI AL K G F EA ME N PD+ T +I+ L+Q+ ++A
Sbjct: 610 CSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAE 669
Query: 486 DIVKTSKERGI 496
+ + RG+
Sbjct: 670 KLREEMIARGL 680
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 229/480 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISPS + +I+ + A+ + +P+ T+N +I+G C G++ +A
Sbjct: 85 GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + + GY + +TY LI+G ++ +L+ M++ +V PN +L+ G
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A L + ER L + N+L+ + E +L KM P+
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + L + E G+L KRG KP TY LME E N
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K L +V +YN++ID +CK M+D A + +E+ ++++ P + ++N+LI G C
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ ++LL + PD T+N +ID LC+ R +AL L M++ GV PN +TYN
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYN 444
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++ C +V + +F +M + PDI +N LI +C+ +++A F M
Sbjct: 445 AMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHK 504
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
L PD SY++LI L GR ++ M +G +PD T N++L+ + F++A
Sbjct: 505 NLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKA 564
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 233/493 (47%), Gaps = 1/493 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ +N +I+ + I A Q + D+FTY LI+G+ + G + A
Sbjct: 120 GYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAA 179
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+++ME PN+ Y+ LIDG C V++ + + ER + + T SL+ G
Sbjct: 180 LHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDG 239
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +LL + + N L+ L EA +L M RG P+
Sbjct: 240 CCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPD 299
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + +++E + + +KRG++P Y +L++ K E
Sbjct: 300 IVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFK 359
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ LV + SYN +ID C + ++ EM P++VT+N LI CK+
Sbjct: 360 ELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEG 419
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + +LVM+++ G KP+ T+N+M+D C + A D + MV+ G+ P+ + YN
Sbjct: 420 RILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYN 479
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI C V ++ LF++M+ + PDI ++N+LI C + +I ++ M
Sbjct: 480 VLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDS 539
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G PD +Y+ L+ A K+ FD+A F + + G PD YT++ I++ L + + + A
Sbjct: 540 GQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMA 598
Query: 485 HDIVKTSKERGIS 497
D +K G S
Sbjct: 599 EDALKHLLMHGCS 611
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 228/491 (46%), Gaps = 2/491 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P T +++ ++ A+V+ A F Q+ P T+ ILI+ A L
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ + GY PN+ T+ +I+GFC + + + + + ++ T +L++G+ +
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
A LL + ME+ + LV + L+ L + S+A + ++G+RG L ++
Sbjct: 173 NGQIKAALHLL-QEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + + E +L ++ V P T+ +L++AL K GR +E L +
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K ++ +YN +++ +C + A E+ M R + P+++ +N LI G+CK V
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ L L P ++NS+ID LC + R L EM PP+ +TYNIL
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNIL 411
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I +LC G + +L + M + P+I T+NA++ +C N + A+ F M+ GL
Sbjct: 412 IDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGL 471
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
PD +Y+ LI K+ DEA F M PD + N +++ L GR +
Sbjct: 472 EPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQE 531
Query: 487 IVKTSKERGIS 497
++ + G S
Sbjct: 532 LLDEMCDSGQS 542
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 120/282 (42%), Gaps = 36/282 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YNA++D N++++A F +M +PD YN+LI+G C+ +VDEA
Sbjct: 435 GVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEA 494
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L K+M P++ +Y LIDG CN R+ V +L+ M + P+ T L+
Sbjct: 495 IVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDA 554
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F + +P +A ++ R++ + G P+
Sbjct: 555 ----------------FCKTQPF-------------------DKAISLFRQIVE-GIWPD 578
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T V L G L L + G P TY +L+ AL K G E L+
Sbjct: 579 FYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLS 638
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ + + ++ ++I + N D+A ++ EM R +
Sbjct: 639 KMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 79/196 (40%), Gaps = 35/196 (17%)
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
CR +DA+ C + MV PP T ++ L+ ++ +G ++ LF ++Q+ ISP I
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 396 -----------------------------------YTFNALIQSFCRMNKIEKAEKAFFS 420
TFN +I FC I KA +
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+L G D F+Y LI L K+G+ A ME++ P+ + +++ L + G
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 481 FEEAHDIVKTSKERGI 496
+A + ERGI
Sbjct: 211 VSDALGLCSQIGERGI 226
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 240/499 (48%), Gaps = 6/499 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P Y+++I AL K+ ++D A M + PD TYN ++HG C G EA
Sbjct: 231 GILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 290
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +K+M G PNV TY+ L++ C R E ++ + M +R + P+ AT R+L+ G
Sbjct: 291 IGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQG 350
Query: 125 VFR---CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++ H +L++R + V N L+ + +A + KM G
Sbjct: 351 YATKGALVEMHALLDLMVRNGIQP---DHHVFNILICAYAKQEKVDQAMLVFSKMRQHGL 407
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P + + L +++ + I G+ P Y L+ L + + +
Sbjct: 408 NPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEE 467
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + + N +N +ID CK + + ++ M + P+++T+NTLI G C
Sbjct: 468 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCC 527
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
++ + +LL ++ G KPD T+ ++I+ CR R +DAL EMV GV PN I
Sbjct: 528 LAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNII 587
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYNI+++ L A + L+ + ++ T+N ++ C+ N ++A + F ++
Sbjct: 588 TYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
L+ + +++ +I AL+K GR DEAK F + NG PD T +L+ E L++QG
Sbjct: 648 CLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSL 707
Query: 482 EEAHDIVKTSKERGISFKS 500
EE D+ + +E G S S
Sbjct: 708 EELDDLFLSMEENGCSADS 726
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 232/480 (48%), Gaps = 6/480 (1%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM---EGLGYAPN 79
S+++D+ + ++ C PD F+YN L+ G+C EAL L+ M G G P+
Sbjct: 144 SDAMDIVLRRMTELG---CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPD 200
Query: 80 VYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLI 139
V +Y +++GF + + M +R + P+ T S++ + + KA E+L
Sbjct: 201 VVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLN 260
Query: 140 RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL 199
++ + + N++L+ ++ EA L+KM G P T+ + L
Sbjct: 261 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNG 320
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
E I D+ KRG++P +TY L++ G VE L+ + ++ + + + +N
Sbjct: 321 RSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFN 380
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
++I + K +D+A + +MR + PN+V + T+I CK V +++
Sbjct: 381 ILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDE 440
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G P+ + S+I LC +++ A + + EM++ G+ NTI +N +I S C G V S
Sbjct: 441 GLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 500
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+LF M + PDI T+N LI C K+++A K SM+++G++PD +Y LI
Sbjct: 501 EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLING 560
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
+ R D+A F M +G +P+ T N+IL+ L R A ++ + + G +
Sbjct: 561 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLE 620
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/495 (23%), Positives = 227/495 (45%), Gaps = 39/495 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P+ Y +I ++ +DL + + + D T+ L+ G+C +A+
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 66 RLV-KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE---RNVCPNEATVRSL 121
+V ++M LG P+V++Y L+ G C+ R E +L +M + P+ + ++
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++G F+ D KA+ + +M DRG
Sbjct: 208 LNGFFKEGDSDKAY-----------------------------------STYHEMLDRGI 232
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
LP+ T+ + L +++ +L+T +K GV P TY ++ +G+ E
Sbjct: 233 LPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 292
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + D + NV +Y+ +++ CK A +I M R + P++ T+ TL+ G+
Sbjct: 293 TLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYA 352
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ + LL +++ G +PD FN +I + + + A+ S+M + G+ PN +
Sbjct: 353 TKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVV 412
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y +I LC G V ++ F++M + ++P+I + +LI C +K +KAE+ M
Sbjct: 413 CYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEM 472
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
L G+ + ++++I + K GR E+++ F M + G PD T N +++ G+
Sbjct: 473 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKM 532
Query: 482 EEAHDIVKTSKERGI 496
+EA ++ + G+
Sbjct: 533 DEATKLLASMVSVGV 547
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 167/347 (48%), Gaps = 9/347 (2%)
Query: 160 LSNNSMASEAAAILR-----KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
L++ + S AAA+ R + G P T+ + C L+ L +K+
Sbjct: 62 LADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKK 121
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G + T+ L++ L R + D L + + + +V SYN ++ C N
Sbjct: 122 GFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQE 181
Query: 274 ATEICREM---RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
A E+ M R P++V++NT+++G K+ + K +L+ G PD T++S
Sbjct: 182 ALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSS 241
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I LC+A + A++ L+ MV+ GV P+ +TYN ++ C+ G ++ +KM++D
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG 301
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ P++ T+++L+ C+ + +A K F SM GL PD +Y L++ G E
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMH 361
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M +NG PD + N+++ +Q + ++A + ++ G++
Sbjct: 362 ALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLN 408
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 92/231 (39%), Gaps = 35/231 (15%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P YN +ID + +D A M KPD TY LI+G CR+ +D+
Sbjct: 510 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD 569
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L K+M G +PN+ TY I++ G + +R A
Sbjct: 570 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA-------------------------- 603
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
A EL + + + N +L+ L N++ EA + + +
Sbjct: 604 ---------AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 654
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
E+ TF+ + L+ ++E + G+ P TY L+ E L + G
Sbjct: 655 ETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQG 705
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 140/492 (28%), Positives = 232/492 (47%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGI P+ +N VI N A M C PD TYN ++ +C+ G + +
Sbjct: 202 LGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGD 261
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+ M+ G PN TY IL+ G+C + E V+E+M + N+ P+ T L++
Sbjct: 262 ARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLIN 321
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ +AF+L + L + NTL+ S SEA +L +M ++G P
Sbjct: 322 GLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKP 381
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T + V +++ + + G P TY L+ KAG E R +
Sbjct: 382 NAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTM 441
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + + + + N ++ C+ ++ A ++ R R + V++ TLI G+ KD
Sbjct: 442 DEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKD 501
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V + +L + E P T+N +I LC+ + E A+ L+E++E G+ P+ TY
Sbjct: 502 GNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTY 561
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N ++ C GDV ++ + KM + PD++T N L++ C +EKA K F + ++
Sbjct: 562 NTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVS 621
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G D +Y+ LI +L K GR D+A ME+ PD YT N I+ L GR E
Sbjct: 622 KGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIRE 681
Query: 484 AHDIVKTSKERG 495
A + + E+G
Sbjct: 682 AEEFMSKMLEKG 693
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 139/514 (27%), Positives = 246/514 (47%), Gaps = 23/514 (4%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP YN ++D L K + A M P+R TYNIL++G C++G + EA
Sbjct: 240 SPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAAN 299
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+++ M P+V+TY +LI+G CN R+ E F++ + M+ + P+ + +L++G
Sbjct: 300 VIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCL 359
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+AF+LL E+ + N ++ +A+ + KM + G+ P+
Sbjct: 360 EWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCV 419
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + ++ E +D ++ +K T ++ L + + E + L+
Sbjct: 420 TYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSA 479
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K + SY +I + K +DRA ++ EM++++I P+ VT+N +I G C+ +
Sbjct: 480 RKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKT 539
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ L LLE G PD+ T+N+++ CR E A ++MVE P+ T NIL
Sbjct: 540 EQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNIL 599
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+R LC G + ++L+LF + + D T+N LI S C+ +++ A M L
Sbjct: 600 LRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKEL 659
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV---------- 476
PD+++Y+A+I AL SGR EA++ M + G PD ET+V
Sbjct: 660 GPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDS 719
Query: 477 -------------QQGRFEEAHDIVKTSKERGIS 497
+G++++A I SK++GI+
Sbjct: 720 SSVAYSEWIKELCTEGKYKDAMRIFGESKQKGIT 753
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/491 (23%), Positives = 208/491 (42%), Gaps = 38/491 (7%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGL---------------------------- 74
P + + I + G A ++ K+M+ L
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192
Query: 75 ----------GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
G PNV T+ I+I G+C + + L +M + N P+ T +++
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT 252
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A +LL+ R L + N L+Y EAA ++ M LP+
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L + E + D + P +Y L+ + + E + L
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + N ++N+++ +CK MD A+ +M + +P+ VT+NTLI+G+CK
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + + K D T N+++ LCR + E+A LS + G + ++Y
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYG 492
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI G+V R+L+L+ +M+ I P T+N +I C+ K E+A +L
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES 552
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL PD +Y+ ++ + G ++A Q M +N PD +T N++L L +G E+A
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKA 612
Query: 485 HDIVKTSKERG 495
+ T +G
Sbjct: 613 LKLFNTWVSKG 623
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 206/434 (47%), Gaps = 31/434 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L + P YN +I+ ++ + I A+ ++MS KP+ T+NI++ C+ G +D+
Sbjct: 342 LKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDD 401
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + +ME G++P+ TY LI+G+C A + E FR ++ M +N+ + T+ +++
Sbjct: 402 ASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILR 461
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ R +A++LL +R ++ TL+ + A + +M ++ +P
Sbjct: 462 TLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIP 521
Query: 184 ESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
+ T++ C++ GL + L+ ++ G+ P +TY ++ + G +
Sbjct: 522 STVTYN----CIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKA 577
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
++ N + ++ +V + N+++ C ++++A ++ + A + VT+NTLI+
Sbjct: 578 FQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITS 637
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK+ + LL + E PD +T+N++I L + R +A + +S+M+E G P+
Sbjct: 638 LCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPD 697
Query: 360 -----------------------TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
++ Y+ I+ LC G ++R+F + + I+ D
Sbjct: 698 QVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKS 757
Query: 397 TFNALIQSFCRMNK 410
T+ L+ + K
Sbjct: 758 TYINLMDGLIKRRK 771
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 115/212 (54%)
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
I PN+ TFN +I G+C + + E L ++ + PD T+N+++D LC+ R DA
Sbjct: 204 IVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDAR 263
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
D L +M G+ PN TYNIL+ C +G + + + + M + + PD++T+N LI
Sbjct: 264 DLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGL 323
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
C +IE+A K M L L PD SY+ LI ++ + EA + M + G P++
Sbjct: 324 CNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNA 383
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T N++++ ++G+ ++A + + +E G S
Sbjct: 384 VTHNIMVKWYCKEGKMDDASNTITKMEESGFS 415
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 23/255 (9%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I PST YN +I L + + A K ++ PD TYN ++HG CR G V++A
Sbjct: 519 IIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAF 578
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ +M + P+V+T IL+ G C + + ++ + + T +L+ +
Sbjct: 579 QFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSL 638
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ AF LL E+E N ++ L+++ EA + KM ++G LP+
Sbjct: 639 CKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQ 698
Query: 186 S-----------------------TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+ + L T + I ++G+ ST
Sbjct: 699 VLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKST 758
Query: 223 YLLLMEALYKAGRDV 237
Y+ LM+ L K + +
Sbjct: 759 YINLMDGLIKRRKSI 773
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 238/493 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ S N+++ LVK +DLA+ +Q++ + + +T NI+I+ +C+ ++
Sbjct: 318 GLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENT 377
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ME G P+V TY LI+ +C + E F +++ M + + P T ++++G
Sbjct: 378 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 437
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A +L ++ N LL N +A I +M +G +P+
Sbjct: 438 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 497
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+F + L L++ G+ P Y +L+ + G E + +
Sbjct: 498 LVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRD 557
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +V +YN +++ CK M+ A E+ EM +R + P+ TF TLI+G+ KD
Sbjct: 558 EMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDG 617
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++K L M+++ KPD T+N++ID C+ E + ++M+ + PN I+Y
Sbjct: 618 NMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYG 677
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
ILI C +G V+ + RL+ +M I T N +++ +CR KA++ +ML
Sbjct: 678 ILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK 737
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ PD +Y+ LI IK D A ME +G PD T N+IL +QGR +EA
Sbjct: 738 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 797
Query: 485 HDIVKTSKERGIS 497
I+ ERG++
Sbjct: 798 ELIMLKMIERGVN 810
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 222/463 (47%), Gaps = 6/463 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN +I+A + ++ A+ MS KP FTYN +I+G+C+ G A
Sbjct: 388 GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRA 447
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +M +G +P+ TY IL+ C + + R+ + M + V P+ + +L+
Sbjct: 448 KGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGL 507
Query: 125 VFR--CLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGY 181
+ + CLD + R M+ L V T+L N + SEA + +M ++G
Sbjct: 508 LSKNGCLDQALKY---FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGC 564
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+ T++ + L L+E + +RGV P F T+ L+ K G +
Sbjct: 565 XLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVT 624
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + L +V +YN +ID FCK + M++ E+ +M R I PN +++ LI+G+C
Sbjct: 625 LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYC 684
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
V + L ++E GF+ T N+++ CRA A + LS M+ G+ P+ I
Sbjct: 685 NMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 744
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN LI ++ R+ L KM+ + PD+ T+N ++ F R ++++AE M
Sbjct: 745 TYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 804
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+ G+ PD +Y++LI + EA + M Q G PD
Sbjct: 805 IERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 220/495 (44%), Gaps = 8/495 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ + N +I+AL K+ I+ M PD TYN LI+ CR G+++EA
Sbjct: 353 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 412
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G G P V+TY +I+G C + VL+ M + + P+ AT L+
Sbjct: 413 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 472
Query: 125 VFR---CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRG 180
R +D + F+ M + + LV + L+ LS N +A R M + G
Sbjct: 473 CCRNDNMMDAERIFDE----MPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 528
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P++ + + ++E + D +++G TY ++ L K E D
Sbjct: 529 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEAD 588
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + + ++ +I+ + K M++A + M R++ P++VT+NTLI G
Sbjct: 589 ELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 648
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK +E+ K EL ++ P+ ++ +I+ C +A EMVE G
Sbjct: 649 CKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATI 708
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
IT N +++ C G+ ++ M I PD T+N LI F + +++A
Sbjct: 709 ITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNK 768
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M GL PD +Y+ ++ + GR EA+ L M + G NPD T ++ V Q
Sbjct: 769 MENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNN 828
Query: 481 FEEAHDIVKTSKERG 495
+EA + +RG
Sbjct: 829 LKEAFRVHDEMLQRG 843
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 134/271 (49%)
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
LL+ +A + EG + L ++N+ N ++ KV +D A EI +E+
Sbjct: 293 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 352
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
+ N+ T N +I+ CK+ ++ T+ L + E G PD T+N++I+ CR E+A
Sbjct: 353 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 412
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
+ + M G+ P TYN +I LC G R+ + +M +SPD T+N L+
Sbjct: 413 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 472
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
CR + + AE+ F M + G+ PD S+SALI L K+G D+A + F M+ G PD
Sbjct: 473 CCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 532
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ +++ + G EA + E+G
Sbjct: 533 NVIYTILIGGFCRNGVMSEALKVRDEMLEQG 563
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 120/245 (48%)
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
SN +++++ + + + E R ++ + + ++ N+L+ G K V E+
Sbjct: 286 SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEI 345
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
++ G + + +T N MI+ LC+ + E+ LS+M E GV P+ +TYN LI + C
Sbjct: 346 YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR 405
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G + + L M + P ++T+NA+I C+ K +A+ ML +G+ PD +
Sbjct: 406 QGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 465
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y+ L+ ++ +A++ F M G PD + + ++ L + G ++A + K
Sbjct: 466 YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK 525
Query: 493 ERGIS 497
G++
Sbjct: 526 NAGLA 530
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 235/467 (50%), Gaps = 2/467 (0%)
Query: 36 MSVDQCKPDRFTYNILIHGICRIGV--VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNA 93
M + +PD +T ILI+ C A ++ M LG PN T++ L++G +
Sbjct: 1 MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60
Query: 94 KRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC 153
++ + ++ + M + P+ T ++++G+ + A +LL + E+ +V
Sbjct: 61 AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
+T++ L + + +EA L +M +RG P T+ + NE + ++
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
R V P T+ +L++ L K G +E + + + NVN+YN ++D +C + MD
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDE 240
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A ++ M + AP++ ++N LI GHCK + + + LL + PD T+++++
Sbjct: 241 AQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMK 300
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
C+ R +DA L EM +G+ P+ +TY+I++ LC G + + L + MQ +I P
Sbjct: 301 GFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEP 360
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
+I+ + LIQ C K+E A + F ++ G++PD +Y+ +I L+K G +EA + F
Sbjct: 361 NIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELF 420
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
M +GC P+S T N+I++ ++ G A +++ RG S S
Sbjct: 421 RDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADS 467
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 224/469 (47%), Gaps = 37/469 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ ++ +++ L I A F +M +PD TY+ +I+G+C++G
Sbjct: 41 LGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTM 100
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A++L+K+ME G PNV Y+ +ID C K + E L M R + PN T S++H
Sbjct: 101 AIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILH 160
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G CN L R ++EA ++ ++M +R +P
Sbjct: 161 G---------------------------FCN--LGR------SNEATSLFKQMVERNVMP 185
Query: 184 ESSTFDYTVTCLVT-GLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
++ TF+ V L G+ L C + +T I++GV+P +TY LM+ + E +
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQC-VFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
N + + +V SYN++I CK +D A + EM + + P+ VT++TL+ G C+
Sbjct: 245 FNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQ 304
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
D ++LL + G PD T++ ++D LC+ ++A + L M E + PN
Sbjct: 305 DGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFI 364
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y ILI+ +C G + + LF + I PD+ T+ +I + +A + F M
Sbjct: 365 YTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMA 424
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
G P++ +Y+ +I+ +++G A + M G + DS T ++
Sbjct: 425 VHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 149/333 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP+ Y++++ + A F+QM PD T+NIL+ G+ + G++ EA
Sbjct: 147 GISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEA 206
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + M G PNV TY L+DG+C+ ++ E ++ IM + P+ + L+ G
Sbjct: 207 QCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKG 266
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A LL + + +TL+ + +A +L +M G LP+
Sbjct: 267 HCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPD 326
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L L+E +L + ++P Y +L++ + G+ +
Sbjct: 327 LMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFS 386
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
++F + +V +Y ++I K + + A E+ R+M PN T+N +I G ++
Sbjct: 387 NLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNG 446
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
+ L+ ++ GF D TF + D R
Sbjct: 447 DTSNAGRLIEEMVGRGFSADSSTFQMLSDLESR 479
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S ++P T Y+ ++ + A ++M PD TY+I++ G+C+ G
Sbjct: 283 MSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGH 342
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+DEA L+K M+ PN++ YTILI G CN ++ + + + + P+ T
Sbjct: 343 LDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTV 402
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ + ++A EL L N ++ N S A ++ +M RG
Sbjct: 403 MISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRG 462
Query: 181 YLPESSTF 188
+ +SSTF
Sbjct: 463 FSADSSTF 470
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 138/473 (29%), Positives = 234/473 (49%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+SP Y ++I ++ ++DLA+ F +M + C P+ TY+ LI+G+C G VDEAL
Sbjct: 229 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL 288
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
++++M G P VYTYT+ I C + E ++ MK+R PN T +L+ G+
Sbjct: 289 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 348
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
R A L + ++ + + N L+ L S A I M G L +
Sbjct: 349 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 408
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + L G D+ + + + +K G P TY L+ G R L+
Sbjct: 409 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 468
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++ + +YN ++ F K ++ A+ +EM + + PN V++ LI GH KD +
Sbjct: 469 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGK 528
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V LL + E G P+ ++N++I+ L + +RF +A +MVE G+ PN ITY
Sbjct: 529 VDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTT 588
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI LC G + ++F M+ + P++YT+++LI C+ K ++AE M G
Sbjct: 589 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG 648
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
L PD ++++LI + GR D A M GC P+ T +++L+ L ++
Sbjct: 649 LAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKE 701
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 142/497 (28%), Positives = 230/497 (46%), Gaps = 43/497 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI PS +N +I+ L K + A L Q+ PD FTY LI G CR +D A
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G PN TY+ LI+G CN RV E +LE M E+ + P T
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL---- 308
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
P+T L EA ++ +M RG P
Sbjct: 309 ---------------------PITA----------LCAIEHEEEAIELVARMKKRGCRPN 337
Query: 185 SSTFDYTVTCLVTGLD----LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
T+ T L++GL L G+ +K G+ P TY L+ L GR
Sbjct: 338 VQTY----TALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTAL 393
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + ++N +YN +I C +++A + +M P +VT+NTLI+G+
Sbjct: 394 KIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGY 453
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
V+ LL ++ E G +PD++T+N ++ + + E A EMVE G+ PN
Sbjct: 454 LTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNP 513
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
++Y LI G V +L L ++M+ +P++ ++NA+I + N+ +AEK
Sbjct: 514 VSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDK 573
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ GL P+ +Y+ LI L ++GR A + F ME+ C P+ YT + ++ L Q+G+
Sbjct: 574 MVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 633
Query: 481 FEEAHDIVKTSKERGIS 497
+EA ++K + +G++
Sbjct: 634 ADEAEILLKEMERKGLA 650
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 140/294 (47%), Gaps = 39/294 (13%)
Query: 230 LYKAGRDVEGDR----YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
+ KA R+ E R +LN + ++ S N ++ K M++ A + ++M +
Sbjct: 134 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 193
Query: 286 IAPNLVTFNTLIS-----------------------------------GHCKDAEVHKTR 310
I P+L+TFNTLI+ GHC++ +
Sbjct: 194 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAF 253
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+ +++ G P+ T++++I+ LC R ++ALD L EM+E G+ P TY + I +L
Sbjct: 254 GVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITAL 313
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
CAI ++ L +M+ P++ T+ ALI R+ K+E A + ML GL P+
Sbjct: 314 CAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNT 373
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+Y+ALI L GRF A + F ME +G ++ T N I++ L G E+A
Sbjct: 374 VTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKA 427
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 110/228 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN ++ K ++ A FQ+M P+ +Y LI G + G VD A
Sbjct: 473 GCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIA 532
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+K+ME +G PNV +Y +I+G R +E ++ + M E+ + PN T +L+ G
Sbjct: 533 LSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDG 592
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R AF++ +R+ L ++L+Y L A EA +L++M +G P+
Sbjct: 593 LCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPD 652
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK 232
TF + V ++ +L + G KP + TY +L++ L K
Sbjct: 653 EVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 120/289 (41%), Gaps = 36/289 (12%)
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCK-VNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
LN + +DR+ + + +++ C+ + R + E+ +L + NTL+
Sbjct: 115 LNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLA 174
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL-------------------------- 335
K V R L +L G +P TFN++I+ L
Sbjct: 175 KFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVF 234
Query: 336 ---------CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
CR + A MV+ G PN++TY+ LI LC G V +L + ++M
Sbjct: 235 TYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM 294
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
I P +YT+ I + C + E+A + M G RP+ +Y+ALI L + G+
Sbjct: 295 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKL 354
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ A + M + G P++ T N ++ L GRF A I + G
Sbjct: 355 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHG 403
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 110/232 (47%), Gaps = 2/232 (0%)
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
F K NM + + R +RDR AP +I + E+ + + L + GF
Sbjct: 103 FYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFS 162
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS-LRLF 383
++ N+++ L + E A + +M+ G+ P+ +T+N LI L G V + L L
Sbjct: 163 LYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILS 222
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
Q Q D +SPD++T+ +LI CR ++ A F M+ G P++ +YS LI L
Sbjct: 223 QIFQYD-LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNE 281
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
GR DEA M + G P YT L + L EEA ++V K+RG
Sbjct: 282 GRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRG 333
>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 250/488 (51%), Gaps = 16/488 (3%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
RLY D+L+ + ++ A+ V +C ++ IG ++EA+ +V
Sbjct: 151 RLYLVTADSLIANGNLQKAH------EVMRC---------MLRNFSEIGRLNEAVGMVMD 195
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M+ G +P+ T +++ + + V + M R VCP+ ++ + +V G FR
Sbjct: 196 MQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGK 255
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A L ++R + C +L L N + + A RKM D G+ P F
Sbjct: 256 IQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 315
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR-YLNHVFKD 249
+ L + + +L+ ++ G KP T+ L++ L K G + R +L V D
Sbjct: 316 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 375
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
NV++Y +I +CK + ++RA + M+++ + PN+ T+ TLI+GHCK +
Sbjct: 376 IYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRA 435
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
EL+ ++ + GF+P+ +T+N++ID LC+ R +A + L++ G+ + +TY ILI+
Sbjct: 436 YELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 495
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
C D+ ++L F +M D+ N LI +FCR K++++E+ F +++LGL P
Sbjct: 496 QCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPT 555
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y+++I K G FD A + F +M+++GC PDS+T ++ L ++ +EA + +
Sbjct: 556 KETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 615
Query: 490 TSKERGIS 497
+RG+S
Sbjct: 616 AMIDRGLS 623
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 186/459 (40%), Gaps = 69/459 (15%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHG---------- 54
G+SPS+ N V++ ++S ID A F +MSV PD ++ +++ G
Sbjct: 200 GLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEA 259
Query: 55 -------------------------ICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDG 89
+C G+V+ A+ ++M LG+ PN+ +T LIDG
Sbjct: 260 DRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDG 319
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C + + F +LE M PN T +L+ G+ + KAF L ++ + +
Sbjct: 320 LCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDI--- 376
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
Y P T+ + LN +
Sbjct: 377 -------------------------------YKPNVHTYTSMIGGYCKEDKLNRAEMLFS 405
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
++G+ P +TY L+ KAG +N + + N+ +YN VID CK +
Sbjct: 406 RMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKS 465
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
A E+ + + + VT+ LI CK +++ + + + GF+ D N
Sbjct: 466 RAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNN 525
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+I CR + +++ +V G+ P TY +I C GD +L+ F M+
Sbjct: 526 ILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRH 585
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
PD +T+ +LI C+ + +++A K + +M+ GL P
Sbjct: 586 GCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 624
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 189/443 (42%), Gaps = 39/443 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P+ + ++ID L K SI A+ ++M + KP+ +T+ LI G+C+ G ++
Sbjct: 304 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 363
Query: 64 ALRL-VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A RL +K + Y PNV+TYT +I G+C ++ + MKE+ + PN T +L+
Sbjct: 364 AFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 423
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G + + +A+EL+ M D G+
Sbjct: 424 NGHCKAGNFDRAYELM-----------------------------------NLMDDEGFR 448
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T++ + L E +L+ G++ TY +L++ K + +
Sbjct: 449 PNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAF 508
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ K +++ N++I FC+ M + + + + + P T+ ++ISG+CK
Sbjct: 509 FCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCK 568
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + + G PD FT+ S+I LC+ ++A M++ G+ P +T
Sbjct: 569 EGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVT 628
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
L C D A ++ + + + I T L++ C K+ A F +L
Sbjct: 629 RVTLAYEYCKRNDSASAMIVLEPLDKKLW---IRTVRTLVRKLCSEKKVGVAALFFQKLL 685
Query: 423 TLGLRPDNFSYSALIKALIKSGR 445
D + +A A +SG+
Sbjct: 686 EKDSSADRVTLAAFTTACSESGK 708
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 249/487 (51%), Gaps = 3/487 (0%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N + +V++ ++ + + M PD LI G CR+G +A ++++ +EG
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G P+V TY ++I G+C A + VL+ M +V P+ T +++ + +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A E+L R ++R+ + L+ +S A +L +M DRG P+ T++ V
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
+ L+E L+ G +P T+ +++ ++ GR ++ ++ L + +
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+V ++N++I+ C+ ++ RA +I +M PN +++N L+ G CK+ ++ + E L
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++ G PD T+N+M+ LC+ + EDA++ L+++ G P ITYN +I L
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G ++++L +M+A + PD T+++L+ R K+++A K F +G+RP+ ++
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 522
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
++++ L KS + D A + M GC P+ + +++E L +G +EA +++
Sbjct: 523 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 582
Query: 494 RGISFKS 500
+G+ KS
Sbjct: 583 KGLMKKS 589
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 201/449 (44%), Gaps = 46/449 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN +I K+ I+ A +MSV PD TYN ++ +C G + +A
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQA 223
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ +M P+V TYTILI+ C V ++L+ M++R P+ T LV+G
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 283
Query: 125 VFRCLDPHKAFELLIRFMEREPLT----QKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + + I+F+ P + + N +L + + +A +L M +G
Sbjct: 284 ICK----EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ P TF+ + L L IL+ + G +P
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP---------------------- 377
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
N SYN ++ FCK MDRA E M R P++VT+NT+++
Sbjct: 378 -------------NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CKD +V E+L L G P T+N++ID L +A + A+ L EM + P+T
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITY+ L+ L G V +++ F + + I P+ TFN+++ C+ + ++A
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF 544
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEA 449
M+ G +P+ SY+ LI+ L G EA
Sbjct: 545 MINRGCKPNETSYTILIEGLAYEGMAKEA 573
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 179/388 (46%), Gaps = 10/388 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ +SP YN ++ +L S + A +M C PD TY ILI CR V
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT----VR 119
A++L+ +M G P+V TY +L++G C R+ E + L M PN T +R
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGD 178
S+ R +D K L+ M R+ + +V N L+ L + A IL KM
Sbjct: 318 SMCS-TGRWMDAEK----LLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ 372
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P S +++ + ++ L+ + RG P TY ++ AL K G+ +
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
LN + + +YN VID K +A ++ EMR +D+ P+ +T+++L+
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G ++ +V + + G +P+ TFNS++ LC++ + + A+D L M+ G P
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP 552
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKM 386
N +Y ILI L G +L L ++
Sbjct: 553 NETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 156/352 (44%), Gaps = 35/352 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P YN +++ + K +D A M C+P+ T+NI++ +C G +A
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L+ M G++P+V T+ ILI+ C + +LE M + PN + L+HG
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHG 388
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ K + I ++ER M RG P+
Sbjct: 389 FCK----EKKMDRAIEYLER-------------------------------MVSRGCYPD 413
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ +T L + + IL+ +G P TY +++ L KAG+ + + L+
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L + +Y+ ++ + +D A + E I PN VTFN+++ G CK
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSR 533
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ + + LV ++ G KP++ ++ +I+ L ++AL+ L+E+ G+
Sbjct: 534 QTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN ++ AL K ++ A Q+S C P TYN +I G+ + G +A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+ +M P+ TY+ L+ G +V E + + + PN T S++ G
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A + L+ + R + L+ L+ MA EA +L ++ ++G + +
Sbjct: 529 LCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKK 588
Query: 185 SST 187
SS
Sbjct: 589 SSA 591
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 65/138 (47%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G SP YN VID L K+ A +M KPD TY+ L+ G+ R G
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VDEA++ + E +G PN T+ ++ G C +++ L M R PNE +
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 121 LVHGVFRCLDPHKAFELL 138
L+ G+ +A ELL
Sbjct: 560 LIEGLAYEGMAKEALELL 577
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 245/491 (49%), Gaps = 1/491 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P YNA+ID ++ I+ A+ +M + + +N L++G+C+ G +++
Sbjct: 305 VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEK 364
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL ++++M G P+ TY++LI+G C + +A F +L+ MK+R + P T +++
Sbjct: 365 ALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIIN 424
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ RC + +L + +V TL+ + E+ IL +M ++G LP
Sbjct: 425 GLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILP 484
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + + E L ++R ++P TY ++ KAG DRY
Sbjct: 485 DVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYF 544
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + ++ NV Y +I+ CK + A + R + R + ++ T++ LI G ++
Sbjct: 545 NEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRN 604
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++H+ + L E G P+ FT+NS+I C+ + A L EM G+ P+ +TY
Sbjct: 605 GKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTY 664
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NILI LC G++ R+ LF ++ ++P+ T+ A++ +C+ A + ML
Sbjct: 665 NILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLL 724
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ PD F Y+ ++ K +F++A F M + G + + N ++E + G+ +E
Sbjct: 725 RGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQE 783
Query: 484 AHDIVKTSKER 494
A+ +++ E+
Sbjct: 784 ANHLLEEMIEK 794
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 141/493 (28%), Positives = 232/493 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y+ +I+ A L +M KP+ TYN LI G R G +++A
Sbjct: 271 GLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQA 330
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R+ +M G N+ + L++G C A ++ + +++ M E+ V P+ T L+ G
Sbjct: 331 FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEG 390
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + +AFELL +R+ L + ++ L AILR+M G P
Sbjct: 391 HCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPN 450
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + +T + E+ IL+ ++G+ P Y L+ KA R E YL
Sbjct: 451 AVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLM 510
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + RL N ++Y ID + K M+ A EM + PN+ + LI GHCK+
Sbjct: 511 EMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEG 570
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V + + +L D T++ +I L R + +A SE+ E G+ PN TYN
Sbjct: 571 NVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYN 630
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C G+V ++ +L ++M I+PDI T+N LI C+ +IE+A+ F +
Sbjct: 631 SLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGR 690
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL P+ +Y+A++ KS A Q M G PD++ N+IL ++ +FE+A
Sbjct: 691 GLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKA 750
Query: 485 HDIVKTSKERGIS 497
D+ + E+G +
Sbjct: 751 LDLFQEMLEKGFA 763
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 139/546 (25%), Positives = 238/546 (43%), Gaps = 52/546 (9%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG-------- 59
PS N+++ L+K N ++L + F M + PD +TY +I C++G
Sbjct: 187 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV 246
Query: 60 ---------VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
++DEA+ L + M G P++YTY ILI+GFC KR E +L M +
Sbjct: 247 LLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVG 306
Query: 111 VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA 170
+ P T +L+ G R D +AF + + ++ NTLL + +A
Sbjct: 307 LKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKAL 366
Query: 171 AILRKMGDRGYLPESSTFDY-------------------------------TVTCLVTGL 199
I+++M ++G P+S T+ T + ++ GL
Sbjct: 367 EIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGL 426
Query: 200 ----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNV 255
+L T IL + G+KP Y LM A K GR E L + + ++ +V
Sbjct: 427 CRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDV 486
Query: 256 NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
YN +I FCK M+ A EM +R + PN T+ I G+ K E+
Sbjct: 487 FCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNE 546
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
+L CG P+ + ++I+ C+ +A ++ V + TY++LI L G
Sbjct: 547 MLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGK 606
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+ + +F ++Q + P+ +T+N+LI C+ ++KA + M G+ PD +Y+
Sbjct: 607 MHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNI 666
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
LI L K+G + AK F +E G P+ T +++ + A +++ RG
Sbjct: 667 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 726
Query: 496 ISFKSF 501
+ +F
Sbjct: 727 VPPDAF 732
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 212/462 (45%), Gaps = 7/462 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P YN++I K+ ++ A +M + +P+ TY I G + G ++ A
Sbjct: 481 GILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIA 540
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R +M G PNV YT LI+G C V E F V + R V + T L+HG
Sbjct: 541 DRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHG 600
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R H+AF + E+ L N+L+ +A+ +L +M +G P+
Sbjct: 601 LSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPD 660
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L ++ + D RG+ P TY +++ K+ + L
Sbjct: 661 IVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLE 720
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + YN++++ CK ++A ++ +EM ++ A + V+FNTLI G+CK
Sbjct: 721 EMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSG 779
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + LL ++E F P+ T+ S+ID C+A +A EM E V P TY
Sbjct: 780 KLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYT 839
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ IG+++ LF++M A I PD T+ +I ++CR + +A K +L
Sbjct: 840 SLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVK 899
Query: 425 GL------RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
G+ R + S + + +G DEA + SM + G
Sbjct: 900 GMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFG 941
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 131/561 (23%), Positives = 235/561 (41%), Gaps = 88/561 (15%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP++ +++ ++D+ K + A F + +P + N L+ + + V+ +
Sbjct: 151 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 210
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+ M P+VYTYT +I C V + RVL M E+
Sbjct: 211 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKA---------------- 254
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
R LD +A EL +++ + + L+ + EA +L +M D G PE
Sbjct: 255 RLLD--EAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI 312
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + + D+ + I D + G++ + L+ + KAG+ + + +
Sbjct: 313 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 372
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG------- 299
+ + + +Y+++I+ C+ M RA E+ EM+ R +AP ++T++ +I+G
Sbjct: 373 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNL 432
Query: 300 ----------------------------HCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
H K+ V ++R +L + E G PD F +NS+
Sbjct: 433 QGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSL 492
Query: 332 IDCLCRAHRFEDALDCLSEMVE-----------------------------------WGV 356
I C+A R E+A L EM+E GV
Sbjct: 493 IIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGV 552
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
PN Y LI C G+V + +F+ + + R+ D+ T++ LI R K+ +A
Sbjct: 553 LPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFG 612
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
F + GL P+ F+Y++LI K G D+A Q M G NPD T N++++ L
Sbjct: 613 IFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLC 672
Query: 477 QQGRFEEAHDIVKTSKERGIS 497
+ G E A ++ + RG++
Sbjct: 673 KAGEIERAKNLFDDIEGRGLT 693
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 138/473 (29%), Positives = 234/473 (49%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+SP Y ++I ++ ++DLA+ F +M + C P+ TY+ LI+G+C G VDEAL
Sbjct: 271 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL 330
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
++++M G P VYTYT+ I C + E ++ MK+R PN T +L+ G+
Sbjct: 331 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 390
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
R A L + ++ + + N L+ L S A I M G L +
Sbjct: 391 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 450
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + L G D+ + + + +K G P TY L+ G R L+
Sbjct: 451 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 510
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++ + +YN ++ F K ++ A+ +EM + + PN V++ TLI GH KD +
Sbjct: 511 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGK 570
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V LL + E G P+ ++N++I+ L + +RF +A +M E G+ PN ITY
Sbjct: 571 VDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTT 630
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI LC G + ++F M+ + P++YT+++LI C+ K ++AE M G
Sbjct: 631 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG 690
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
L PD ++++LI + GR D A M GC P+ T +++L+ L ++
Sbjct: 691 LAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKE 743
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 142/497 (28%), Positives = 229/497 (46%), Gaps = 43/497 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI PS +N +I+ L K + A L Q+ PD FTY LI G CR +D A
Sbjct: 235 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 294
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G PN TY+ LI+G CN RV E +LE M E+ + P T
Sbjct: 295 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL---- 350
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
P+T L EA ++ +M RG P
Sbjct: 351 ---------------------PITA----------LCAIEHEEEAIELVARMKKRGCRPN 379
Query: 185 SSTFDYTVTCLVTGLD----LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
T+ T L++GL L G+ +K G+ P TY L+ L GR
Sbjct: 380 VQTY----TALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTAL 435
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + ++N +YN +I C +++A + +M P +VT+NTLI+G+
Sbjct: 436 KIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGY 495
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
V+ LL ++ E G +PD++T+N ++ + + E A EMVE G+ PN
Sbjct: 496 LTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNP 555
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
++Y LI G V +L L ++M+ +P++ ++NA+I + N+ +AEK
Sbjct: 556 VSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDK 615
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M GL P+ +Y+ LI L ++GR A + F ME+ C P+ YT + ++ L Q+G+
Sbjct: 616 MAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 675
Query: 481 FEEAHDIVKTSKERGIS 497
+EA ++K + +G++
Sbjct: 676 ADEAEILLKEMERKGLA 692
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 134/549 (24%), Positives = 223/549 (40%), Gaps = 59/549 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ Y I AL + A +M C+P+ TY LI G+ R+G ++ A
Sbjct: 340 GIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVA 399
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +M G PN TY LI+ C R + ++ M+ N T ++ G
Sbjct: 400 IGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKG 459
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D KA L + ++ PL + NTL+ + AA +L M + G P+
Sbjct: 460 LCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPD 519
Query: 185 SSTFDYTV-------------------------------TCLVTGLDLNETCGILDTFIK 213
T++ V T L+ G + I + ++
Sbjct: 520 EWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLE 579
Query: 214 R----GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
R G P +Y ++ L K R E ++ + + + L+ NV +Y +ID C+
Sbjct: 580 RMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNG 639
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
A +I +M R PNL T+++LI G C++ + + LL + G PD+ TF
Sbjct: 640 RTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFT 699
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL---CAIGDVARSLR----- 381
S+ID R + A L MV+ G PN TY++L++ L C + + +++
Sbjct: 700 SLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVY 759
Query: 382 ----------------LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L +M P + T++ L+ CR + +AE+ M G
Sbjct: 760 SFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERG 819
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
PD Y +L+ A K+ D A + F S+E G ++ L + G+ EEA
Sbjct: 820 FCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQ 879
Query: 486 DIVKTSKER 494
+ E+
Sbjct: 880 ALFDNMLEK 888
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 140/551 (25%), Positives = 225/551 (40%), Gaps = 67/551 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+T YNA+I+ L A F M + TYN +I G+C G +++A
Sbjct: 410 GLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKA 469
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L ++M +G P V TY LI+G+ V R+L++MKE P+E T LV G
Sbjct: 470 MVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSG 529
Query: 125 VFRC----------------------------LDPHK-------AFELLIRFMEREPLTQ 149
+ +D H A LL R E
Sbjct: 530 FSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPN 589
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC---- 205
N ++ LS + SEA I KM ++G LP T+ T L+ GL N
Sbjct: 590 VESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITY----TTLIDGLCRNGRTQFAF 645
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
I KR P TY L+ L + G+ E + L + + L + ++ +ID F
Sbjct: 646 KIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGF 705
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISG------------------------HC 301
+ +D A + R M D PN T++ L+ G H
Sbjct: 706 VVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHE 765
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
KD LL + E G +P T+++++ LCR RF +A + +M E G P+
Sbjct: 766 KDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDRE 825
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y L+ + C +V +L++F ++A + + ALI + C+ ++E+A+ F +M
Sbjct: 826 IYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNM 885
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
L D ++ L+ L+K G D + ME P+ T ++ L + G+
Sbjct: 886 LEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKS 945
Query: 482 EEAHDIVKTSK 492
E+ + K
Sbjct: 946 IESEPLADKLK 956
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 140/294 (47%), Gaps = 39/294 (13%)
Query: 230 LYKAGRDVEGDR----YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
+ KA R+ E R +LN + ++ S N ++ K M++ A + ++M +
Sbjct: 176 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 235
Query: 286 IAPNLVTFNTLIS-----------------------------------GHCKDAEVHKTR 310
I P+L+TFNTLI+ GHC++ +
Sbjct: 236 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAF 295
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+ +++ G P+ T++++I+ LC R ++ALD L EM+E G+ P TY + I +L
Sbjct: 296 GVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITAL 355
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
CAI ++ L +M+ P++ T+ ALI R+ K+E A + ML GL P+
Sbjct: 356 CAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNT 415
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+Y+ALI L GRF A + F ME +G ++ T N I++ L G E+A
Sbjct: 416 VTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKA 469
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 120/289 (41%), Gaps = 36/289 (12%)
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCK-VNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
LN + +DR+ + + +++ C+ + R + E+ +L + NTL+
Sbjct: 157 LNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLA 216
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL-------------------------- 335
K V R L +L G +P TFN++I+ L
Sbjct: 217 KFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVF 276
Query: 336 ---------CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
CR + A MV+ G PN++TY+ LI LC G V +L + ++M
Sbjct: 277 TYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM 336
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
I P +YT+ I + C + E+A + M G RP+ +Y+ALI L + G+
Sbjct: 337 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKL 396
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ A + M + G P++ T N ++ L GRF A I + G
Sbjct: 397 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHG 445
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 114/239 (47%), Gaps = 10/239 (4%)
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
Y ++CF ++M++R +RDR AP +I + E+ + + L +
Sbjct: 146 YKHNMNCF--ISMLNRL------VRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEIS 197
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
GF ++ N+++ L + E A + +M+ G+ P+ +T+N LI L G V
Sbjct: 198 GMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVR 257
Query: 378 RS-LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+ L L Q Q D +SPD++T+ +LI CR ++ A F M+ G P++ +YS L
Sbjct: 258 EAELILSQIFQYD-LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTL 316
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
I L GR DEA M + G P YT L + L EEA ++V K+RG
Sbjct: 317 INGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRG 375
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 228/499 (45%), Gaps = 36/499 (7%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I G+ P T YN +++ LV NS+ L + +MSV KPD T+N+LI +CR
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A+ +++ M G P+ T+T ++ G+ + R+ E M E + +V
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR- 179
+VHG + +A +++M ++
Sbjct: 265 IVHGFCK-----------------------------------EGRVEDALNFIQEMSNQD 289
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G+ P+ TF+ V L + I+D ++ G P TY ++ L K G E
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L+ + N +YN +I CK N ++ ATE+ R + + I P++ TFN+LI G
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
C EL + G +PD+FT+N +ID LC + ++AL+ L +M G +
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
ITYN LI C + +F +M+ +S + T+N LI C+ ++E A +
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M+ G +PD ++Y++L+ + G +A +M NGC PD T ++ L + G
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 480 RFEEAHDIVKTSKERGISF 498
R E A ++++ + +GI+
Sbjct: 590 RVEVASKLLRSIQMKGINL 608
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 226/475 (47%), Gaps = 3/475 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P + + V+ ++ +D A +QM C + N+++HG C+ G V++A
Sbjct: 219 GLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDA 278
Query: 65 LRLVKQMEGL-GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L +++M G+ P+ YT+ L++G C A V ++++M + P+ T S++
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + + +A E+L + + R+ + NTL+ L + EA + R + +G LP
Sbjct: 339 GLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF+ + L + + + +G +P TY +L+++L G+ E L
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +V +YN +ID FCK N A EI EM ++ N VT+NTLI G CK
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V +L+ ++ G KPDK+T+NS++ CR + A D + M G P+ +TY
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI LC G V + +L + +Q I+ + +N +IQ R K +A F ML
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638
Query: 424 LG-LRPDNFSYSALIKALIKSGR-FDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
PD SY + + L G EA + + + G P+ + ++ E L+
Sbjct: 639 QNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLL 693
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 165/328 (50%), Gaps = 3/328 (0%)
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
KM G P+ STF+ + L L +L+ G+ P T+ +M+ + G
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 235 RDVEGDRYLNHVFKDRLVSNVN-SYNMVIDCFCKVNMMDRATEICREMRDRD-IAPNLVT 292
D++G + + S N S N+++ FCK ++ A +EM ++D P+ T
Sbjct: 239 -DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
FNTL++G CK V E++ ++L+ G+ PD +T+NS+I LC+ ++A++ L +M+
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
PNT+TYN LI +LC V + L + + + I PD+ TFN+LIQ C
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
A + F M + G PD F+Y+ LI +L G+ DEA ME +GC T N ++
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 473 ETLVQQGRFEEAHDIVKTSKERGISFKS 500
+ + + EA +I + G+S S
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNS 505
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 166/391 (42%), Gaps = 70/391 (17%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +N++I L + + +A F++M C+PD FTYN+LI +C G +DEA
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++KQME G A +V TY LIDGFC A + E + + M+ VHG
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME--------------VHG 500
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
V R + NTL+ L + +AA ++ +M G P+
Sbjct: 501 VSR---------------------NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ +T G D+ + I+ G +P TY L+ L KAGR + L
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP-NLVTFNTLISGHCKD 303
+ + ++YN VI + A + REM +++ AP + V++ + G C
Sbjct: 600 SIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNG 659
Query: 304 A-EVHKTRELLVMLLECGFKPD-----------------------------KFTFN---- 329
+ + + LV LLE GF P+ K F+
Sbjct: 660 GGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEV 719
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
SM+ L + +F+DAL L +++ P T
Sbjct: 720 SMVKGLLKIRKFQDALATLGGVLDSRQPRRT 750
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 1/181 (0%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
F P+ + ++ L R+ F+D L +M T T+ ILI S L
Sbjct: 79 FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEIL 138
Query: 381 RLFQKMQAD-RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+ M + + PD + +N ++ N ++ E + M G++PD +++ LIKA
Sbjct: 139 SVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKA 198
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
L ++ + A M G PD T +++ +++G + A I + E G S+
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS 258
Query: 500 S 500
+
Sbjct: 259 N 259
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 143/497 (28%), Positives = 240/497 (48%), Gaps = 24/497 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S YN +DAL K+N+ LAY KFQQM PD FTY+I++ G+C+ G +D+A
Sbjct: 33 GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVH 123
L+ Q+ G NV TY+++IDG C A RV + + + M C P+ T SL+
Sbjct: 93 KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLK 152
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ +AF +L +M + ++ +TLL L EA + +M ++ +
Sbjct: 153 GLCSGERMSEAF-VLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCV 211
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ + VT L + E C + +G K + ++ L K G E
Sbjct: 212 PDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEE---- 267
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ N +I+ C+ M+D A + EM R+ P+ FNTLI CK
Sbjct: 268 --------------AQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCK 313
Query: 303 DAEVHKTREL---LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ L + + E P+ T+N M+D LC+A + ++A + ++EM +G+ P+
Sbjct: 314 SKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPD 373
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+TY+ L+ LC +G + R+ L ++M + + PD +T +++ + + K++ A
Sbjct: 374 VVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLE 433
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+M G PD +Y+ L+ L K+GR DEA M C PD ++ +I+ L + G
Sbjct: 434 TMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSG 493
Query: 480 RFEEAHDIVKTSKERGI 496
+ AH I + +RG+
Sbjct: 494 QAAGAHAIFQEMVKRGV 510
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 162/372 (43%), Gaps = 41/372 (11%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N +I+ L +S +D A F++M P +N LIH +C+ + + + L ++M+
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329
Query: 74 LGY---APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
+ PN+ TY I++D C AK++ E ++ M + P+ T +LV G+ +
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCK--- 386
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
L +L A +L +M G P+S T
Sbjct: 387 --------------------------LGKLDR------ACDLLEEMSKEGVFPDSFTDAS 414
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L ++ L+T RG P TY L++ L KAGR E +L + +
Sbjct: 415 ILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK 474
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+V SY ++I C+ A I +EM R + P+ V +++L+ G ++
Sbjct: 475 CTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLAL 534
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
ELL L KPD ++D LC+A + EDA + + M + G P + TY ++ L
Sbjct: 535 ELLKTSL---CKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGL 591
Query: 371 CAIGDVARSLRL 382
+G V ++ +L
Sbjct: 592 RKLGKVDKARQL 603
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 137/309 (44%), Gaps = 6/309 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ---CKPDRFTYNILIHGICRIGVVDEA 64
PS L+N +I A+ KS + L FQ+M + C P+ TYNI++ +C+ +DEA
Sbjct: 299 PSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEA 358
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LV +M G +P+V TY+ L+DG C ++ +LE M + V P+ T S+++
Sbjct: 359 QELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNA 418
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A L R + NTLL L EA L KM P+
Sbjct: 419 LSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ +T L I +KRGV P Y L++ L + G + D L
Sbjct: 479 VFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLE---DLALE 535
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + MV+D CK + A E+ M D + T+ +++SG K
Sbjct: 536 LLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLG 595
Query: 305 EVHKTRELL 313
+V K R+L+
Sbjct: 596 KVDKARQLV 604
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 6/229 (2%)
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
R + ++ T+N + K E + G+ PD FT++ ++ LC+A
Sbjct: 30 RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA-DRISPDIYTFNA 400
+ A + L ++ E GV N ITY+++I C V +L +F+ M + PD+ TFN+
Sbjct: 90 DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNS 149
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
L++ C ++ +A F M G P+ SYS L+ L K+GR DEA + + M +
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHD-----IVKTSKERGISFKSFPGL 504
C PD + L + R EA D + K SK ++F + G+
Sbjct: 210 CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGI 258
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 32/179 (17%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P YN ++D L K+ ID A +M +C PD F+Y I+I +CR G A
Sbjct: 439 GSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGA 498
Query: 65 LRLVKQMEGLGYAPNVYTY--------------------------------TILIDGFCN 92
+ ++M G P+ Y +++DG C
Sbjct: 499 HAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVLDGLCK 558
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL 151
A + + V+E M + + T S+V G+ + KA +L+ E ++L
Sbjct: 559 AGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASETHTSVERL 617
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 234/496 (47%), Gaps = 12/496 (2%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N +I + + A F +++ PD T+ L+HG+C V EAL QM
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
PNV T+T L++G C R+ E +L+ M E + P + T ++V G+ + D
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 133 KAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
A LL + E + +V + ++ L + S+A + +M ++G P+ T++
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ + ++ +L ++R + P TY L+ A K G+ E + + + +
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+ N +Y+ +ID FCK N +D A + M + +PNL+TFNTLI G+C + E
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
LL + E G D T+N++I ALD L EM+ G+ P+ +T + L+ LC
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Query: 372 AIGDVARSLRLFQKMQADR-----------ISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
G + +L +F+ MQ + + PD+ T+N LI K +AE+ +
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G+ PD +YS++I L K R DEA Q F SM +P+ T ++ + GR
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596
Query: 481 FEEAHDIVKTSKERGI 496
++ ++ RGI
Sbjct: 597 VDDGLELFCEMGRRGI 612
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 137/502 (27%), Positives = 237/502 (47%), Gaps = 12/502 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + ++ +V+ DL +Q+M Q + D +++NILI C + AL
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ LG P+V T+T L+ G C RV+E M E PN T +L++G+ R
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY-LPESS 186
+A LL R ME ++ T++ + A +LRKM + + +P
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ + L ++ + ++G+ P TY ++ +GR + ++ L +
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ ++ +V +YN +I+ F K A E+ EM R I PN +T++++I G CK +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ ++ G P+ TFN++ID C A R +D ++ L EM E G+ +T TYN L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL-- 424
I +GD+ +L L Q+M + + PDI T + L+ C K++ A + F M
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Query: 425 ---------GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G+ PD +Y+ LI LI G+F EA++ + M G PD+ T + +++ L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
Query: 476 VQQGRFEEAHDIVKTSKERGIS 497
+Q R +EA + + + S
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFS 578
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 222/489 (45%), Gaps = 12/489 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ + +++ L + I A +M D +P + TY ++ G+C+ G AL L
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNL 241
Query: 68 VKQMEGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+++ME + + PNV Y+ +ID C R ++ + M+E+ + P+ T S++ G
Sbjct: 242 LRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
A +LL +ER+ + N L+ EA + +M RG +P +
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L+ + +G P T+ L++ A R +G L+ +
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ LV++ +YN +I F V ++ A ++ +EM + P++VT +TL+ G C + ++
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 307 HKTRELLVMLLEC-----------GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
E+ ++ + G +PD T+N +I L +F +A + EM G
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ P+TITY+ +I LC + + ++F M + SP++ TF LI +C+ +++
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ F M G+ + +Y LI K G + A F M +G PD+ T +L L
Sbjct: 602 ELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Query: 476 VQQGRFEEA 484
+ + A
Sbjct: 662 WSKEELKRA 670
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 178/383 (46%), Gaps = 26/383 (6%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP YNA+I+A VK A + +M P+ TY+ +I G C+ +D A
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M G +PN+ T+ LIDG+C AKR+ + +L M E + + T +L+HG
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDRGYLPE 184
+ D + A +LL + + C+TLL L +N +A + + M + L
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S F+ GV+P TY +L+ L G+ +E +
Sbjct: 501 SHPFN-------------------------GVEPDVQTYNILISGLINEGKFLEAEELYE 535
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +V + +Y+ +ID CK + +D AT++ M + +PN+VTF TLI+G+CK
Sbjct: 536 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V EL + G + T+ ++I + ALD EM+ GV P+TIT
Sbjct: 596 RVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIR 655
Query: 365 ILIRSLCAIGDVARSLRLFQKMQ 387
++ L + ++ R++ + +K+Q
Sbjct: 656 NMLTGLWSKEELKRAVAMLEKLQ 678
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 194/426 (45%), Gaps = 23/426 (5%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ +Y+A+ID+L K A F +M PD FTYN +I G C G +A
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+L+++M +P+V TY LI+ F + E + + M R + PN T S++ G
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG- 369
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F + A E + M + + L+ NTL+ + +L +M + G + +
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL-------------- 230
++T++ + DLN +L I G+ P T L++ L
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489
Query: 231 --YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
K+ +D++ N V D V +YN++I A E+ EM R I P
Sbjct: 490 VMQKSKKDLDASHPFNGVEPD-----VQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+ +T++++I G CK + + + ++ + F P+ TF ++I+ C+A R +D L+
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
EM G+ N ITY LI +G++ +L +FQ+M + + PD T ++
Sbjct: 605 CEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664
Query: 409 NKIEKA 414
++++A
Sbjct: 665 EELKRA 670
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G+ P + YN +I L+ A +++M PD TY+ +I G+C+ +D
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA ++ M ++PNV T+T LI+G+C A RV + + M R + N T +L+
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
G + + + A ++ + + +L L + A A+L K+
Sbjct: 624 CGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 139/507 (27%), Positives = 242/507 (47%), Gaps = 16/507 (3%)
Query: 5 GISPSTRLYNAVIDALVKSN-SIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P YNAV+DA ++S +I A F++M Q P+ FTYNILI G C G +D
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDV 223
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
ALR +ME G PNV TY LIDG+C +++ + F +L M + + PN + +++
Sbjct: 224 ALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVIN 283
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R + +L +R ++ NTL+ +A + +M G P
Sbjct: 284 GLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSP 343
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ + + ++N LD RG+ P TY L++ + G E R L
Sbjct: 344 SVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +V +YN +I+ C M A + +M+++ + P++V+++T++SG C+
Sbjct: 404 KEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRS 463
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V + + ++ G KPD T++S+I C R ++A D EM+ G+PP+ TY
Sbjct: 464 YDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTY 523
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI + C GD+ ++++L +M + PD+ T++ LI + + +A++ +
Sbjct: 524 TALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFY 583
Query: 424 LGLRPDNFSYSALIK-----------ALIKS----GRFDEAKQTFLSMEQNGCNPDSYTS 468
P + +Y LI+ +LIK G EA Q F SM + PD
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAY 643
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERG 495
N+++ + G +A+ + K + G
Sbjct: 644 NVMIHGHCRGGDIRKAYSLYKEMVKSG 670
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 216/451 (47%), Gaps = 1/451 (0%)
Query: 35 QMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAK 94
Q + D C +++++ R+ ++D+AL +V + G+ P V +Y ++D +K
Sbjct: 124 QETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSK 183
Query: 95 R-VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC 153
R ++ V + M + V PN T L+ G + A R ++ L +
Sbjct: 184 RNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTY 243
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
NTL+ + +LR M +G P +++ + L + E +L K
Sbjct: 244 NTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNK 303
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
RG TY L++ K G + + + L +V +Y +I CK M+R
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNR 363
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
ATE +MR R + PN T+ TL+ G + +++ +L +++ GF P T+N++I+
Sbjct: 364 ATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALIN 423
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
C A + DA+ L +M E G+ P+ ++Y+ ++ C DV +LR+ +KM A I P
Sbjct: 424 GHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKP 483
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
D T+++LIQ FC + ++A F ML +GL PD F+Y+ALI A G +A Q
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLH 543
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
M + G PD T ++++ L +Q R EA
Sbjct: 544 NEMVEKGVLPDVVTYSVLINGLNKQARTREA 574
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/499 (23%), Positives = 225/499 (45%), Gaps = 50/499 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN +ID K ID + + M++ +P+ +YN++I+G+CR G + E
Sbjct: 235 GCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEI 294
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +M GY+ + TY LI G+C + + M + P+ T SL+H
Sbjct: 295 SFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHS 354
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + ++A E L + R + TL+ S +EA +L++M D G+ P
Sbjct: 355 MCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPS 414
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + + +L+ ++G+ P
Sbjct: 415 VVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTP-------------------------- 448
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+V SY+ V+ FC+ +D A + R+M + I P+ +T+++LI G C+
Sbjct: 449 ---------DVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQR 499
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +L +L G PD+FT+ ++I+ C + A+ +EMVE GV P+ +TY+
Sbjct: 500 RTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYS 559
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN---------------ALIQSFCRMN 409
+LI L + RL K+ + P T++ +LI+ FC
Sbjct: 560 VLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG 619
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
+ +A++ F SML +PD +Y+ +I + G +A + M ++G + T
Sbjct: 620 MMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVI 679
Query: 470 LILETLVQQGRFEEAHDIV 488
+++TL ++G+ E + ++
Sbjct: 680 ALVKTLHKEGKVNELNSVI 698
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 185/378 (48%), Gaps = 13/378 (3%)
Query: 130 DPHKAFELLIRFMEREPLTQ-KL--VCNTLLYRLSNNSMASEAAAILRKMGDRGY---LP 183
+PH+ F L + + LT+ KL TL ++ ++ E A+++ + Y
Sbjct: 73 NPHQFFTLRCKCITLHILTRFKLYKTAQTLAEDVAAKTLDDEDASLVFRSLQETYDLCNS 132
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
SS FD V +++ I+ G P +Y +++A ++ R++ +
Sbjct: 133 TSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNIS---FA 189
Query: 244 NHVFKDRLVS----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+VFK+ L S NV +YN++I FC +D A M + PN+VT+NTLI G
Sbjct: 190 ENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDG 249
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+CK ++ ELL + G +P+ ++N +I+ LCR R ++ L+EM + G +
Sbjct: 250 YCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLD 309
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+TYN LI+ C G+ ++L + +M +SP + T+ +LI S C+ + +A +
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLD 369
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M GL P+ +Y+ L+ + G +EA + M NG +P T N ++ G
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAG 429
Query: 480 RFEEAHDIVKTSKERGIS 497
+ +A +++ KE+G++
Sbjct: 430 KMVDAIAVLEDMKEKGLT 447
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 162/330 (49%), Gaps = 1/330 (0%)
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLV-TGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
+A +I+ G++P +++ + + + +++ + ++ V P TY +L
Sbjct: 152 KALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNIL 211
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ AG R+ + + K + NV +YN +ID +CK+ +D E+ R M + +
Sbjct: 212 IRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGL 271
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PNL+++N +I+G C++ + + +L + + G+ D+ T+N++I C+ F AL
Sbjct: 272 EPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALV 331
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
+EM+ G+ P+ ITY LI S+C G++ R+ +M+ + P+ T+ L+ F
Sbjct: 332 MHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ + +A + M+ G P +Y+ALI +G+ +A M++ G PD
Sbjct: 392 QKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVV 451
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ + +L + +EA + + +GI
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKRKMVAKGI 481
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 78/190 (41%), Gaps = 19/190 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P Y A+I+A + A +M PD TY++LI+G+ + E
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTRE 573
Query: 64 ALRLVKQMEGLGYAPNVYTYTILID---------------GFCNAKRVAEVFRVLEIMKE 108
A RL+ ++ P+ TY LI+ GFC + E +V E M E
Sbjct: 574 AKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLE 633
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN----NS 164
+N P+ ++HG R D KA+ L ++ L + L+ L N
Sbjct: 634 KNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNE 693
Query: 165 MASEAAAILR 174
+ S A +LR
Sbjct: 694 LNSVIANVLR 703
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 143/497 (28%), Positives = 240/497 (48%), Gaps = 24/497 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S YN +DAL K+N+ LAY KFQQM PD FTY+I++ G+C+ G +D+A
Sbjct: 33 GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVH 123
L+ Q+ G NV TY+++IDG C A RV + + + M C P+ T SL+
Sbjct: 93 KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLK 152
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ +AF +L +M + ++ +TLL L EA + +M ++ +
Sbjct: 153 GLCSGERMSEAF-VLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCV 211
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ + VT L + E C + +G K + ++ L K G E
Sbjct: 212 PDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEE---- 267
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ N +I+ C+ M+D A + EM R+ P+ FNTLI CK
Sbjct: 268 --------------AQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCK 313
Query: 303 DAEVHKTREL---LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ L + + E P+ T+N M+D LC+A + ++A + ++EM +G+ P+
Sbjct: 314 SKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPD 373
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+TY+ L+ LC +G + R+ L ++M + + PD +T +++ + + K++ A
Sbjct: 374 VVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLE 433
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+M G PD +Y+ L+ L K+GR DEA M C PD ++ +I+ L + G
Sbjct: 434 TMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSG 493
Query: 480 RFEEAHDIVKTSKERGI 496
+ AH I + +RG+
Sbjct: 494 QAAGAHAIFQEMVKRGV 510
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 162/372 (43%), Gaps = 41/372 (11%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N +I+ L +S +D A F++M P +N LIH +C+ + + + L ++M+
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329
Query: 74 LGY---APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
+ PN+ TY I++D C AK++ E ++ M + P+ T +LV G+ +
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A +LL +M G P+S T
Sbjct: 390 LDRACDLL-----------------------------------EEMSKEGVFPDSFTDAS 414
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L ++ L+T RG P TY L++ L KAGR E +L + +
Sbjct: 415 ILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK 474
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+V SY ++I C+ A I +EM R + P+ V +++L+ G ++
Sbjct: 475 CTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLAL 534
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
ELL L KPD ++D LC+A + EDA + + M + G P + TY ++R L
Sbjct: 535 ELLKTSL---CKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGL 591
Query: 371 CAIGDVARSLRL 382
+G V ++ +L
Sbjct: 592 RKLGKVDKARQL 603
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 135/309 (43%), Gaps = 6/309 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ---CKPDRFTYNILIHGICRIGVVDEA 64
PS L+N +I A+ KS + L FQ+M + C P+ TYNI++ +C+ +DEA
Sbjct: 299 PSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEA 358
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LV +M G +P+V TY+ L+DG C ++ +LE M + V P+ T S+++
Sbjct: 359 QELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNA 418
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A L R + NTLL L EA L KM P+
Sbjct: 419 LSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ +T L I +KRGV P Y L++ L + G + D L
Sbjct: 479 VFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLE---DLALE 535
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + MV+D CK + A E+ M D + T+ ++ G K
Sbjct: 536 LLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLG 595
Query: 305 EVHKTRELL 313
+V K R+L+
Sbjct: 596 KVDKARQLV 604
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 6/229 (2%)
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
R + ++ T+N + K E + G+ PD FT++ ++ LC+A
Sbjct: 30 RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA-DRISPDIYTFNA 400
+ A + L ++ E GV N ITY+++I C V +L +F+ M A PD+ TFN+
Sbjct: 90 DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNS 149
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
L++ C ++ +A F M G P+ SYS L+ L K+GR DEA + + M +
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHD-----IVKTSKERGISFKSFPGL 504
C PD + L + R EA D + K SK ++F + G+
Sbjct: 210 CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGI 258
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 70/179 (39%), Gaps = 32/179 (17%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P YN ++D L K+ ID A +M +C PD F+Y I+I +CR G A
Sbjct: 439 GSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGA 498
Query: 65 LRLVKQMEGLGYAPNVYTY--------------------------------TILIDGFCN 92
+ ++M G P+ Y +++DG C
Sbjct: 499 HAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVVDGLCK 558
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL 151
A + + V+E M + + T ++V G+ + KA +L+ E ++L
Sbjct: 559 AGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASETHTSVERL 617
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 240/489 (49%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+PS Y ++DAL KS I A L + M C P+ TYN LI+G C++G +DEA+
Sbjct: 233 APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVV 292
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L QM +P+V+TY ILIDG+C +R + ++L+ M + PN T +L+ +
Sbjct: 293 LFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLV 352
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ AF L + R+ N ++ A + + M DRG LP+
Sbjct: 353 KSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIY 412
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ ++ +++ +L+ + G P TY ++ L KA + E +
Sbjct: 413 TYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVL 472
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+V + + +ID CK +D A ++ REM AP++V + LI G CK ++
Sbjct: 473 RNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQL 532
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
K+ +L+ G P T++ +ID LC++ R D L M+E GV P+ I Y +
Sbjct: 533 DKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSV 592
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I LC + L++ M+ +P + T+N L+ C+++++++A M + G
Sbjct: 593 IDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGC 652
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
PD +Y+++ KS D+A + F +M+ GC+P + +L+L LV + + ++A +
Sbjct: 653 LPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAME 712
Query: 487 IVKTSKERG 495
I + + E G
Sbjct: 713 IWEEALEAG 721
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 240/490 (48%), Gaps = 3/490 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP + Y+ +I+ K+ AY +M P YN +I G+C G VD AL
Sbjct: 164 SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 223
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+ M+ AP+V TYTIL+D C + R+++ +LE M E PN T +L++G
Sbjct: 224 HYRDMQ-RNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 282
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + +A L + +E N L+ + A +L++M G P
Sbjct: 283 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 342
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + LV + + ++R KP T+ L+++ K G+ ++ L +
Sbjct: 343 TYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQ-LDLAYELFQL 401
Query: 247 FKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
DR + ++ +YN++I C+ N +D A ++ M + P++VT+N+++SG CK ++
Sbjct: 402 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 461
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V + E+ +L G+ D T +++ID LC++ R +DA L EM G P+ + Y I
Sbjct: 462 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 521
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI C + +SL F +M P + T++ +I C+ ++ +ML G
Sbjct: 522 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 581
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ PD Y+++I L KS +DEA + + M+Q GC P T N++++ L + R +EA
Sbjct: 582 VTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAI 641
Query: 486 DIVKTSKERG 495
+++ + G
Sbjct: 642 HLLEVMESDG 651
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 229/476 (48%), Gaps = 4/476 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P+ YN +I+ K ++D A + F QM + C PD FTYNILI G C+ +
Sbjct: 266 GCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDG 325
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L+++M G PN TY L+D + + + F + ++M R+ P+ T ++
Sbjct: 326 AKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDM 385
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A+EL +R L N ++ + +A +L +M + G P+
Sbjct: 386 FCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPD 445
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ V+ L ++E + + G T L++ L K+ R + ++ L
Sbjct: 446 VVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLR 505
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ +V +Y ++I FCK + +D++ EM D+ P ++T++ +I CK A
Sbjct: 506 EMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSA 565
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V LL +LE G PD + S+ID LC++ +++A + M + G P +TYN
Sbjct: 566 RVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYN 625
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+L+ LC + + ++ L + M++D PD T+N++ F + + +KA + F +M +
Sbjct: 626 VLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSR 685
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
G P F YS L+ L+ + D+A + + + G + D S TL Q R
Sbjct: 686 GCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEIS----RTLQQNKR 737
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 227/499 (45%), Gaps = 5/499 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +YN +I L + +D A + ++ M + C P TY IL+ +C+ + +A
Sbjct: 197 GIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRN-CAPSVITYTILVDALCKSARISDA 255
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ M G APNV TY LI+GFC + E + M E + P+ T L+ G
Sbjct: 256 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 315
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ P +LL ++ + NTL+ L + +A + + M R P
Sbjct: 316 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 375
Query: 185 SSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
TF+ + C V LDL + RG P TY +++ +A R + +
Sbjct: 376 HFTFNLMIDMFCKVGQLDLAYE--LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL 433
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + + +V +YN ++ CK + +D A E+ +R+ ++VT +TLI G CK
Sbjct: 434 LERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCK 493
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ +LL + G PD + +I C+A + + +L SEM++ G P IT
Sbjct: 494 SRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVIT 553
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y+I+I LC V L + M ++PD + ++I C+ + ++A + + M
Sbjct: 554 YSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMK 613
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G P +Y+ L+ L K R DEA ME +GC PD+ T N + + + +
Sbjct: 614 QTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHD 673
Query: 483 EAHDIVKTSKERGISFKSF 501
+A + + K RG S F
Sbjct: 674 KAFRLFQAMKSRGCSPTPF 692
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 218/458 (47%), Gaps = 5/458 (1%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
K +FT N L+ R EA L K +P+ TY+ LI+GFC A+ + +R
Sbjct: 129 KHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYR 188
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF--MEREPLTQKLVCNTLLYR 159
+L+ M++R + P+ A +++ G+ D + L+ + M+R + L+
Sbjct: 189 LLDEMEKRGIVPHNAVYNTIIKGL---CDNGRVDSALVHYRDMQRNCAPSVITYTILVDA 245
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
L ++ S+A+ IL M + G P T++ + +++E + + ++ P
Sbjct: 246 LCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPD 305
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
TY +L++ K R +G + L + K N +YN ++D K A + +
Sbjct: 306 VFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQ 365
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
M RD P+ TFN +I CK ++ EL ++ + G PD +T+N MI CRA+
Sbjct: 366 MMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRAN 425
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
R +DA L M E G PP+ +TYN ++ LC V + +++ ++ D+ T +
Sbjct: 426 RIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCS 485
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI C+ +++ AEK M G PD +Y+ LI K+ + D++ F M
Sbjct: 486 TLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDK 545
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
GC P T +++++ L + R + ++KT ERG++
Sbjct: 546 GCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVT 583
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 36/211 (17%)
Query: 320 GFKPDKF-----------------------------------TFNSMIDCLCRAHRFEDA 344
G+K KF T++++I+ C+A F+ A
Sbjct: 127 GYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQA 186
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
L EM + G+ P+ YN +I+ LC G V +L ++ MQ + +P + T+ L+ +
Sbjct: 187 YRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRN-CAPSVITYTILVDA 245
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
C+ +I A M+ G P+ +Y+ LI K G DEA F M +N C+PD
Sbjct: 246 LCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPD 305
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+T N++++ +Q R ++ +++ + G
Sbjct: 306 VFTYNILIDGYCKQERPQDGAKLLQEMVKYG 336
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 6/160 (3%)
Query: 343 DALDCLSEMVEW-----GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
D LD + +W G + T N L+ + + LF+ + SPD T
Sbjct: 110 DDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSIT 169
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
++ LI FC+ ++A + M G+ P N Y+ +IK L +GR D A + M+
Sbjct: 170 YSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ 229
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+N C P T ++++ L + R +A I++ E G +
Sbjct: 230 RN-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCA 268
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 407 RMNKIEKAEKAFFSMLT--LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+++ ++KA K FF T G + F+ + L+ A ++ + EA F + C+PD
Sbjct: 108 QLDDLDKAVK-FFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPD 166
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
S T + ++ + F++A+ ++ ++RGI
Sbjct: 167 SITYSTLINGFCKARDFQQAYRLLDEMEKRGI 198
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/502 (28%), Positives = 240/502 (47%), Gaps = 12/502 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + ++ +V+ DL +Q+M Q + D +++NILI C + AL
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ LG P+V T+T L+ G C RV+E M E PN T +L++G+ R
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL-PESS 186
+A LL R ME ++ T++ + A +LRKM + ++ P
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ + L ++ + ++G+ P TY ++ +GR + ++ L +
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ ++ +V +YN +I+ F K A E+ EM R I PN +T+N++I G CK +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 376
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
++ ++ G PD FTF ++ID C A R +D ++ L EM G+ NT+TYN L
Sbjct: 377 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 436
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL-- 424
I C +GD+ +L L Q+M + + PDI T N L+ C K++ A + F +M
Sbjct: 437 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 496
Query: 425 ---------GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G+ PD +Y+ LI LI G+F EA++ + M G PD+ T + +++ L
Sbjct: 497 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
Query: 476 VQQGRFEEAHDIVKTSKERGIS 497
+Q R +EA + + + S
Sbjct: 557 CKQSRLDEATQMFVSMGSKSFS 578
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 132/531 (24%), Positives = 235/531 (44%), Gaps = 47/531 (8%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N +I + + A F +++ PD T+ L+HG+C V EAL QM
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
PNV T+T L++G C R+ E +L+ M E + P + T ++V G+ + D
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 133 KAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
A LL + E + +V + ++ L + S+A + +M ++G P+ T++
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ + ++ +L ++R + P TY L+ A K G+ E + + +
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 356
Query: 252 VSNVNSYNMVIDCFCKVNMMDRA-----------------------------------TE 276
+ N +YN +ID FCK + +D A E
Sbjct: 357 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGME 416
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
+ EM R + N VT+NTLI G C +++ +L ++ G PD T N+++D LC
Sbjct: 417 LLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 476
Query: 337 RAHRFEDALDCLSEMVEW-----------GVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
+ +DAL+ M + GV P+ +TYNILI L G + L+++
Sbjct: 477 DNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEE 536
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M I PD T++++I C+ +++++A + F SM + P+ +++ LI K+GR
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGR 596
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
D+ + F M + G D+ ++ + G A DI + G+
Sbjct: 597 VDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGV 647
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/489 (25%), Positives = 223/489 (45%), Gaps = 12/489 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ + +++ L + I A +M D +P + TY ++ G+C+ G AL L
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNL 241
Query: 68 VKQMEGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+++ME + + PNV Y+ +ID C R ++ + M+E+ + P+ T S++ G
Sbjct: 242 LRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
A +LL +ER+ + N L+ EAA + +M RG +P +
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 361
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + L+ + +G P T+ L++ A R +G L+ +
Sbjct: 362 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 421
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ LV+N +YN +I FC V ++ A ++ ++M + P++VT NTL+ G C + ++
Sbjct: 422 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 481
Query: 307 HKTRELLVMLLEC-----------GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
E+ + + G +PD T+N +I L +F +A + EM G
Sbjct: 482 KDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG 541
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ P+TITY+ +I LC + + ++F M + SP++ TFN LI +C+ +++
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGL 601
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ F M G+ D Y LI K G + A F M +G PD+ T +L
Sbjct: 602 ELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF 661
Query: 476 VQQGRFEEA 484
+ E A
Sbjct: 662 WSKEELERA 670
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 178/382 (46%), Gaps = 24/382 (6%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP YNA+I+A VK A + +M P+ TYN +I G C+ +D A
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 380
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M G +P+V+T+T LIDG+C AKR+ + +L M R + N T +L+HG
Sbjct: 381 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 440
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
D + A +L + + + CNTLL L +N +A + + M +
Sbjct: 441 CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM-------QK 493
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
S D LD + GV+P TY +L+ L G+ +E +
Sbjct: 494 SKMD---------LDASHPF--------NGVEPDVLTYNILICGLINEGKFLEAEELYEE 536
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ +V + +Y+ +ID CK + +D AT++ M + +PN+VTFNTLI+G+CK
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGR 596
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V EL + G D + ++I + ALD EM+ GV P+TIT
Sbjct: 597 VDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRN 656
Query: 366 LIRSLCAIGDVARSLRLFQKMQ 387
++ + ++ R++ + + +Q
Sbjct: 657 MLTGFWSKEELERAVAMLEDLQ 678
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 197/424 (46%), Gaps = 19/424 (4%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ +Y+A+ID+L K A F +M PD FTYN +I G C G +A
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+L+++M +P+V TY LI+ F + E + + M R + PN T S++ G
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG- 369
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F D A E + M + + + TL+ + +L +M RG +
Sbjct: 370 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 429
Query: 185 SSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL------------ 230
+ T++ + CLV DLN + I GV P T L++ L
Sbjct: 430 TVTYNTLIHGFCLVG--DLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEM 487
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
+KA + + D +H F + + +V +YN++I A E+ EM R I P+
Sbjct: 488 FKAMQKSKMDLDASHPF-NGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 546
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
+T++++I G CK + + + ++ V + F P+ TFN++I+ C+A R +D L+ E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCE 606
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M G+ + I Y LI +G++ +L +FQ+M + + PD T ++ F +
Sbjct: 607 MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEE 666
Query: 411 IEKA 414
+E+A
Sbjct: 667 LERA 670
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 141/358 (39%), Gaps = 46/358 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+T YN++ID K + +D A F M+ C PD FT+ LI G C +D+
Sbjct: 355 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDG 414
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M G N TY LI GFC + + + M VCP+ T
Sbjct: 415 MELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT------- 467
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD------ 178
CNTLL L +N +A + + M
Sbjct: 468 ----------------------------CNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 499
Query: 179 -----RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
G P+ T++ + L+ E + + RG+ P TY +++ L K
Sbjct: 500 ASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
R E + + NV ++N +I+ +CK +D E+ EM R I + + +
Sbjct: 560 SRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIY 619
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
TLI G K ++ ++ ++ G PD T +M+ E A+ L ++
Sbjct: 620 ITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 677
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 151/490 (30%), Positives = 231/490 (47%), Gaps = 5/490 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ R YN V+D L+ N + F +M P +T+ +++ +C + VD A L
Sbjct: 198 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 257
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+K M G PN Y LI RV EV ++LE M P+ T +HG+ +
Sbjct: 258 LKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 317
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
L H+A +L+ R + R L++ L EA +L K+ + P
Sbjct: 318 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVL 373
Query: 188 FDYTVTCLVTGLDLNETCGIL-DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
F+ + V+ L+E ++ ++ + G P TY L+ L K G V +N +
Sbjct: 374 FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 433
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
NV +Y ++ID FCK ++ A + EM + +A N V +N LIS CKD +V
Sbjct: 434 QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 493
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ + G KPD FTFNS+I LC+ ++FE+AL +M+ GV NTITYN L
Sbjct: 494 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 553
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I + G + +L+L M D T+N LI++ CR IEK F M++ GL
Sbjct: 554 IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGL 613
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P+N S + LI L ++G A + M G PD T N ++ L + GR +EA +
Sbjct: 614 NPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALN 673
Query: 487 IVKTSKERGI 496
+ + GI
Sbjct: 674 LFDKLQVEGI 683
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 144/517 (27%), Positives = 232/517 (44%), Gaps = 46/517 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP+ + V+ AL N +D A + M+ C P+ Y LIH + ++G V+E
Sbjct: 230 GISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEV 289
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L+++M +G P+V T+ I G C R+ E ++++ M R PN T L+HG
Sbjct: 290 LKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHG 349
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK-MGDRGYLP 183
+ R +A LL + P ++ NTL+ + EA A++ + M G P
Sbjct: 350 LCRMGKVDEARMLL----NKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGP 405
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + L L +++ +G +P TY +L++ K GR E L
Sbjct: 406 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 465
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + L N YN +I CK + A + +M + P++ TFN+LI G CK
Sbjct: 466 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK- 524
Query: 304 AEVHKTRELLV----MLLEC----------------------------------GFKPDK 325
V+K E L MLLE G D
Sbjct: 525 --VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDD 582
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T+N +I LCRA E L +M+ G+ PN I+ NILI LC G++ +L +
Sbjct: 583 ITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRD 642
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M ++PDI T+N+LI C+ + ++A F + G+ PD +Y+ LI K G
Sbjct: 643 MIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGM 702
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
FD+A +G P+ T +++ +++G E
Sbjct: 703 FDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/519 (23%), Positives = 223/519 (42%), Gaps = 33/519 (6%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
+Y +ID L + QM + + +++ R G+ +A RL+ M
Sbjct: 131 VYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 190
Query: 72 EGL-GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
G+ P +Y +++D V V M + + P T ++ + +
Sbjct: 191 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 250
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
A LL + +V TL++ LS +E +L +M G +P+ +TF+
Sbjct: 251 VDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFND 310
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L L ++E ++D + RG P TY +LM L + G+ E LN V
Sbjct: 311 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPN 370
Query: 251 LV--------------------------------SNVNSYNMVIDCFCKVNMMDRATEIC 278
+V ++ +YN +I CK + A E+
Sbjct: 371 VVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELM 430
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
EM+ + PN++T+ LI CK+ + + R +L + G + +N +I LC+
Sbjct: 431 NEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKD 490
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+ +DAL+ +M G P+ T+N LI LC + +L L+Q M + + + T+
Sbjct: 491 EKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITY 550
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
N LI +F R +++A K ML G D+ +Y+ LIKAL ++G ++ F M
Sbjct: 551 NTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS 610
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G NP++ + N+++ L + G + A + ++ RG++
Sbjct: 611 KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLT 649
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 142/291 (48%), Gaps = 8/291 (2%)
Query: 214 RGV---KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
RGV +P F +Y ++++ L + + V ++ +V+ C VN
Sbjct: 191 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 250
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+D A + ++M PN + + TLI K V++ +LL +L G PD TFN
Sbjct: 251 VDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFND 310
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
I LC+ R +A + M+ G PN+ TY +L+ LC +G V + L K+
Sbjct: 311 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP--- 367
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFF-SMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+P++ FN LI + ++++A+ SML++G PD F+Y+ LI L K G A
Sbjct: 368 -NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSA 426
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
++ M+ GC P+ T ++++ ++GR EEA +++ +G++ +
Sbjct: 427 RELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNA 477
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 144/325 (44%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P YN +I L K + A +M + C+P+ TY ILI C+ G ++E
Sbjct: 401 VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEE 460
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ +M G G A N Y LI C ++V + + M + P+ T SL+
Sbjct: 461 ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 520
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +A L + + + NTL++ EA ++ M RG
Sbjct: 521 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 580
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + L ++ + + + + +G+ P + +L+ L + G +L
Sbjct: 581 DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFL 640
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ L ++ +YN +I+ CK A + +++ I P+ +T+NTLIS HCK+
Sbjct: 641 RDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKE 700
Query: 304 AEVHKTRELLVMLLECGFKPDKFTF 328
LL ++ GF P++ T+
Sbjct: 701 GMFDDAHLLLSRGVDSGFIPNEVTW 725
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
Query: 358 PNTITYNILIRSLCAIGDVARSL-RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
P +YN+++ L A G+ + + +F +M + ISP +YTF ++++ C +N+++ A
Sbjct: 198 PTFRSYNVVLDVLLA-GNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACA 256
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
M G P+ Y LI AL K GR +E + M GC PD T N + L
Sbjct: 257 LLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLC 316
Query: 477 QQGRFEEAHDIVKTSKERGISFKSF 501
+ R EA +V RG + SF
Sbjct: 317 KMLRIHEAAKLVDRMLLRGFTPNSF 341
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 145/493 (29%), Positives = 238/493 (48%), Gaps = 4/493 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+SP YN +I+ L K+ + A +M C P+ T L+ G+C+ G +DEA+
Sbjct: 175 VSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAM 234
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L++ M+ G+ +V Y LI GFCN + + + M + + N T LVHG+
Sbjct: 235 ELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGL 294
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R L K ++ M + +V T L+ L + A+ A +L M ++G P
Sbjct: 295 CR-LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPS 353
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ ++ L + + IL I++G K TY LM+ L G+ E + N
Sbjct: 354 NVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN 413
Query: 245 HVFKDR--LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+F + L NV ++NM+I CK + +A +I R+M + NLVT+N L+ G K
Sbjct: 414 SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLK 473
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ + EL +L+ GF P+ FT++ +ID C+ A EM G+ P
Sbjct: 474 AGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFD 533
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN L+ SLC G + ++ LFQ+M PDI +FN +I + + ++ M+
Sbjct: 534 YNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMV 593
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+GLRPD ++S LI L K G DEAK M +G PD+ + +L+ L +G
Sbjct: 594 EMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTT 653
Query: 483 EAHDIVKTSKERG 495
E +++ +G
Sbjct: 654 EIINLLHQMAAKG 666
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 145/531 (27%), Positives = 248/531 (46%), Gaps = 47/531 (8%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMS------------------VDQCKP------ 43
PS N ++DAL +S + LA+ +++M+ D KP
Sbjct: 72 PSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGV 131
Query: 44 -----------DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
+ F NI++ G+CR G V EA+ L+++M +P++ +Y LI+G C
Sbjct: 132 VGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCK 191
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
AK++ E +L M+ PN T +L+ G+ + +A ELL ++ ++
Sbjct: 192 AKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVL 251
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL----DLNETCGIL 208
TL+ NN + +M +G T+ +CLV GL E +L
Sbjct: 252 YGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTY----SCLVHGLCRLGQWKEANTVL 307
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN-HVFKDRLVSNVNSYNMVIDCFCK 267
+ + G+ P TY L++ L K GR LN V K SNV +YN+++ CK
Sbjct: 308 NAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV-TYNVLLSGLCK 366
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL--ECGFKPDK 325
++ A +I R M ++ ++VT+NTL+ G C +V + +L + E +P+
Sbjct: 367 EGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNV 426
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
FTFN +I LC+ R A+ +MV+ G N +TYN+L+ G + ++ L+++
Sbjct: 427 FTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQ 486
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
+ P+ +T++ LI FC+M + A+ F M T GL P F Y+ L+ +L K G
Sbjct: 487 VLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGS 546
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++AK F M C PD + N +++ ++ G F+ ++ E G+
Sbjct: 547 LEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGL 597
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 203/441 (46%), Gaps = 2/441 (0%)
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA+ L P+ T L+D ++ F V M +V P+ ++ +L+
Sbjct: 57 EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALI 116
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
P F ++ ++R + N +L L N EA ++R+MG +
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVS 176
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ +++ + L L E G+L G P T LM+ L K GR E
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + K ++V Y +I FC +DR E+ EM + I+ N+VT++ L+ G C+
Sbjct: 237 LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 296
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + +L + E G PD T+ +ID LC+ R A+D L+ MVE G P+ +T
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 356
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN+L+ LC G V + ++ + M D+ T+N L++ C K+++A K F SM
Sbjct: 357 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 416
Query: 423 TLG--LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
L P+ F+++ LI L K GR +A + M + G + T N++L ++ G+
Sbjct: 417 DNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 476
Query: 481 FEEAHDIVKTSKERGISFKSF 501
+EA ++ K + G SF
Sbjct: 477 IKEAMELWKQVLDLGFVPNSF 497
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 190/405 (46%), Gaps = 6/405 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G LY +I + ++D F +M + TY+ L+HG+CR+G EA
Sbjct: 244 GFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEA 303
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ M G P+V TYT LIDG C R +L +M E+ P+ T L+ G
Sbjct: 304 NTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSG 363
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + AF++L +E+ + NTL+ L + EA + M D E
Sbjct: 364 LCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLE 423
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ F + + L+ GL L + I +K+G TY +L+ KAG+ E
Sbjct: 424 PNVFTFNM--LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAM 481
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
V V N +Y+++ID FCK+ M++ A + EMR + P L +NTL++
Sbjct: 482 ELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASL 541
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ + + + L + +PD +FN+MID +A F+ + +MVE G+ P+
Sbjct: 542 CKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDA 601
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+T++ LI L +G++ + ++M A +PD +++L++
Sbjct: 602 LTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGL 646
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 96/210 (45%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P++ Y+ +ID K +++A F +M P F YN L+ +C+ G +++
Sbjct: 490 LGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQ 549
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L ++M P++ ++ +IDG A V + M E + P+ T +L++
Sbjct: 550 AKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLIN 609
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + + +A L R + LV ++LL LS+ +E +L +M +G +
Sbjct: 610 RLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVL 669
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
+ +TCL + + +L TF +
Sbjct: 670 DRKIVSTILTCLCHSIQEVDVMELLPTFFQ 699
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/491 (26%), Positives = 237/491 (48%), Gaps = 1/491 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS +N+++ L K +D A F+ M D +P+ TYNI+I +C G V+EA
Sbjct: 352 GCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKD-AEPNSSTYNIIIDMLCMAGKVEEA 410
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +ME G PN+ T I++D C AK+ + + E +R PN T SL+ G
Sbjct: 411 YMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDG 470
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + A+ L ++ +V +L+ + + I ++M RG P+
Sbjct: 471 LGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPD 530
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + C+ D+ + I + G P +Y +L+ L KAG+ E +
Sbjct: 531 LTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFH 590
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + +YN V+D FCK +D+A E+ EM+ + + P + T+ ++I G K
Sbjct: 591 AMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKID 650
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L G + + ++S+ID + R ++A L EM++ G+ PN T+N
Sbjct: 651 RLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 710
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ +L ++ +L FQ M+ + SP+ YT++ LI CR+ K KA + M
Sbjct: 711 SLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQ 770
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL P+ +Y+ +I L K G +A F + NG PD+ + N ++E + R EA
Sbjct: 771 GLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEA 830
Query: 485 HDIVKTSKERG 495
+ + + ++ +G
Sbjct: 831 YHVFEETRLKG 841
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/529 (22%), Positives = 236/529 (44%), Gaps = 42/529 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P LYN ID K+ ++D+A+ F ++ KPD +Y +I +C+ G + EA
Sbjct: 248 LEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAE 307
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L QME P Y Y +I G+ +A + +++L+ +KER P+ + S +
Sbjct: 308 ELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNS----I 363
Query: 126 FRCLDPHKAFE---LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
CL + + L M+++ N ++ L EA I +M G
Sbjct: 364 LTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLF 423
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG-------- 234
P T + V L + +T +RG P TY L++ L K G
Sbjct: 424 PNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRL 483
Query: 235 ---------------------------RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
R +G + + + ++ N +DC K
Sbjct: 484 FENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFK 543
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+++ I +++ P++ +++ LI G K + +T + + + GF D
Sbjct: 544 AGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARA 603
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+N+++D C++ + + A + L EM VPP TY +I L I + + LF++ +
Sbjct: 604 YNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAK 663
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ I ++ +++LI F ++ +I++A M+ GL P+ +++++L+ AL+K+ +
Sbjct: 664 SKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEIN 723
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
EA F SM++ C+P++YT ++++ L + ++ +A + +++G+
Sbjct: 724 EALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGL 772
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/529 (21%), Positives = 225/529 (42%), Gaps = 36/529 (6%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L P+ Y +I A+ ++ + A +QM + + L+ + R G V+
Sbjct: 176 LKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEG 235
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL LV +++G P++ Y + ID F A V ++ +K + + P++ + S++
Sbjct: 236 ALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIW 295
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +A EL + + NT++ + A +L ++ +RG +P
Sbjct: 296 VLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIP 355
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+F+ +TCL ++E + + +K+ +P STY ++++ L AG+ E
Sbjct: 356 SVVSFNSILTCLGKKRKVDEALTLFEA-MKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIR 414
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + L N+ + N+++D CK + A E+ R PN VT+ +LI G K
Sbjct: 415 DEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKK 474
Query: 304 AEVHKTRELLVMLLECGF-----------------------------------KPDKFTF 328
V L +L+ G +PD
Sbjct: 475 GNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLL 534
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N+ +DC+ +A E ++ +G P+ +Y+ILI L G + +F M+
Sbjct: 535 NTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQ 594
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ D +NA++ FC+ K++KA + M + P +Y ++I L K R DE
Sbjct: 595 QGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDE 654
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
A F + G + + +++ + GR +EA+ I++ ++G++
Sbjct: 655 AYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 703
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 115/533 (21%), Positives = 220/533 (41%), Gaps = 36/533 (6%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S LG ++ ALV++ +D A M + +P Y +LI +
Sbjct: 138 MSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQ 197
Query: 61 VDEALRLVKQMEGLGY-----------------------------------APNVYTYTI 85
+ AL L++QM+ +GY P++ Y +
Sbjct: 198 PERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNV 257
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
ID F A V ++ +K + + P++ + S++ + + +A EL +
Sbjct: 258 CIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETER 317
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
+ NT++ + A +L ++ +RG +P +F+ +TCL ++E
Sbjct: 318 AVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEAL 377
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
+ + +K+ +P STY ++++ L AG+ E + + L N+ + N+++D
Sbjct: 378 TLFEA-MKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRL 436
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
CK + A E+ R PN VT+ +LI G K V L +L+ G +
Sbjct: 437 CKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANP 496
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
+ S+I R ED EM G P+ N + + GDV + +F+
Sbjct: 497 VVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFED 556
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
++ PD+ +++ LI + + + F +M G D +Y+A++ KSG+
Sbjct: 557 IKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGK 616
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
D+A + M+ P T I++ L + R +EA+ + + +K +GI
Sbjct: 617 LDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIEL 669
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 112/498 (22%), Positives = 203/498 (40%), Gaps = 73/498 (14%)
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+++++M LGY L+ +R+ + RV+ M+ P + L+ +
Sbjct: 133 KVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAM 192
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
P +A ELL + E + TL+ L+ A A++ ++ P+
Sbjct: 193 AEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDI 252
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
++ + C +++ +G+KP +Y ++ L KAGR E +
Sbjct: 253 VLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQ 312
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN----------- 294
+ +R V +YN +I + + A ++ ++++R P++V+FN
Sbjct: 313 METERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRK 372
Query: 295 -----TLISGHCKDAEVHKTRELLVMLLEC------------------GFKPDKFTFNSM 331
TL KDAE + + +++ + C G P+ T N M
Sbjct: 373 VDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIM 432
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM--QAD 389
+D LC+A +FE A + + G PN++TY LI L G+V + RLF+ M
Sbjct: 433 VDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGH 492
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSM--------LTL----------------- 424
+P +YT +LI++F + E K F M LTL
Sbjct: 493 NANPVVYT--SLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKG 550
Query: 425 ----------GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
G PD SYS LI L K+G+ E F +M+Q G D+ N +++
Sbjct: 551 RAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDG 610
Query: 475 LVQQGRFEEAHDIVKTSK 492
+ G+ ++A+++++ K
Sbjct: 611 FCKSGKLDKAYEVLEEMK 628
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 176/448 (39%), Gaps = 38/448 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ N ++D L K+ + AY F+ S C P+ TY LI G+ + G VD+A
Sbjct: 421 GLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDA 480
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL + M G+ N YT LI F R + ++ + M R P+ + + +
Sbjct: 481 YRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDC 540
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
VF+ D K + L + L++ L+ A E ++I M +G+ +
Sbjct: 541 VFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALD 600
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ V L++ +L+ + V P +TY +++ L K R E
Sbjct: 601 ARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFE 660
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL-------- 296
+ NV Y+ +ID F KV +D A I EM + + PN+ T+N+L
Sbjct: 661 EAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAE 720
Query: 297 ---------------------------ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
I+G C+ + +K + + G P+ T+
Sbjct: 721 EINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYT 780
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+MI L + DA G P+ ++N LI + R++ + +
Sbjct: 781 TMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGM---SHANRAIEAYHVFEET 837
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKA 417
R+ A I +NK E E+A
Sbjct: 838 RLKGCRINVKACISLLDALNKAECLEQA 865
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 5/210 (2%)
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
L+S + + ++ + F+P + +I + A + E AL+ L +M E G
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ L+R+L G V +L L +++ + PDI +N I F + ++ A
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
K F + + GL+PD+ SY+++I L K+GR EA++ F ME P +Y N ++
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332
Query: 476 VQQGRFEEAHDIVKTSKERG-----ISFKS 500
G+FE A+ ++ KERG +SF S
Sbjct: 333 GSAGQFENAYKLLDQLKERGCIPSVVSFNS 362
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 145/493 (29%), Positives = 238/493 (48%), Gaps = 4/493 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+SP YN +I+ L K+ + A +M C P+ T L+ G+C+ G +DEA+
Sbjct: 29 VSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAM 88
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L++ M+ G+ +V Y LI GFCN + + + M + + N T LVHG+
Sbjct: 89 ELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGL 148
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R L K ++ M + +V T L+ L + A+ A +L M ++G P
Sbjct: 149 CR-LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPS 207
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ ++ L + + IL I++G K TY LM+ L G+ E + N
Sbjct: 208 NVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN 267
Query: 245 HVFKDR--LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+F + L NV ++NM+I CK + +A +I R+M + NLVT+N L+ G K
Sbjct: 268 SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLK 327
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ + EL +L+ GF P+ FT++ +ID C+ A EM G+ P
Sbjct: 328 AGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFD 387
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN L+ SLC G + ++ LFQ+M PDI +FN +I + + ++ M+
Sbjct: 388 YNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMV 447
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+GLRPD ++S LI L K G DEAK M +G PD+ + +L+ L +G
Sbjct: 448 EMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTT 507
Query: 483 EAHDIVKTSKERG 495
E +++ +G
Sbjct: 508 EIINLLHQMAAKG 520
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 190/405 (46%), Gaps = 6/405 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G LY +I + ++D F +M + TY+ L+HG+CR+G EA
Sbjct: 98 GFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEA 157
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ M G P+V TYT LIDG C R +L +M E+ P+ T L+ G
Sbjct: 158 NTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSG 217
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + AF++L +E+ + NTL+ L + EA + M D E
Sbjct: 218 LCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLE 277
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ F + + L+ GL L + I +K+G TY +L+ KAG+ E
Sbjct: 278 PNVFTFNM--LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAM 335
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
V V N +Y+++ID FCK+ M++ A + EMR + P L +NTL++
Sbjct: 336 ELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASL 395
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ + + + L + +PD +FN+MID +A F+ + +MVE G+ P+
Sbjct: 396 CKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDA 455
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+T++ LI L +G++ + ++M A +PD +++L++
Sbjct: 456 LTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGL 500
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 171/350 (48%), Gaps = 2/350 (0%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
N +L L N EA ++R+MG + P+ +++ + L L E G+L
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G P T LM+ L K GR E L + K ++V Y +I FC +DR
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
E+ EM + I+ N+VT++ L+ G C+ + + +L + E G PD T+ +ID
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
LC+ R A+D L+ MVE G P+ +TYN+L+ LC G V + ++ + M
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG--LRPDNFSYSALIKALIKSGRFDEAKQ 451
D+ T+N L++ C K+++A K F SM L P+ F+++ LI L K GR +A +
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
M + G + T N++L ++ G+ +EA ++ K + G SF
Sbjct: 302 IHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSF 351
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 96/210 (45%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P++ Y+ +ID K +++A F +M P F YN L+ +C+ G +++
Sbjct: 344 LGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQ 403
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L ++M P++ ++ +IDG A V + M E + P+ T +L++
Sbjct: 404 AKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLIN 463
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + + +A L R + LV ++LL LS+ +E +L +M +G +
Sbjct: 464 RLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVL 523
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
+ +TCL + + +L TF +
Sbjct: 524 DRKIVSTILTCLCHSIQEVDVMELLPTFFQ 553
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 151/490 (30%), Positives = 231/490 (47%), Gaps = 5/490 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ R YN V+D L+ N + F +M P +T+ +++ +C + VD A L
Sbjct: 180 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 239
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+K M G PN Y LI RV EV ++LE M P+ T +HG+ +
Sbjct: 240 LKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 299
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
L H+A +L+ R + R L++ L EA +L K+ + P
Sbjct: 300 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVL 355
Query: 188 FDYTVTCLVTGLDLNETCGIL-DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
F+ + V+ L+E ++ ++ + G P TY L+ L K G V +N +
Sbjct: 356 FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 415
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
NV +Y ++ID FCK ++ A + EM + +A N V +N LIS CKD +V
Sbjct: 416 QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 475
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ + G KPD FTFNS+I LC+ ++FE+AL +M+ GV NTITYN L
Sbjct: 476 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 535
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I + G + +L+L M D T+N LI++ CR IEK F M++ GL
Sbjct: 536 IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGL 595
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P+N S + LI L ++G A + M G PD T N ++ L + GR +EA +
Sbjct: 596 NPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALN 655
Query: 487 IVKTSKERGI 496
+ + GI
Sbjct: 656 LFDKLQVEGI 665
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 144/517 (27%), Positives = 232/517 (44%), Gaps = 46/517 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP+ + V+ AL N +D A + M+ C P+ Y LIH + ++G V+E
Sbjct: 212 GISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEV 271
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L+++M +G P+V T+ I G C R+ E ++++ M R PN T L+HG
Sbjct: 272 LKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHG 331
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK-MGDRGYLP 183
+ R +A LL + P ++ NTL+ + EA A++ + M G P
Sbjct: 332 LCRMGKVDEARMLL----NKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGP 387
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + L L +++ +G +P TY +L++ K GR E L
Sbjct: 388 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 447
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + L N YN +I CK + A + +M + P++ TFN+LI G CK
Sbjct: 448 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK- 506
Query: 304 AEVHKTRELLV----MLLEC----------------------------------GFKPDK 325
V+K E L MLLE G D
Sbjct: 507 --VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDD 564
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T+N +I LCRA E L +M+ G+ PN I+ NILI LC G++ +L +
Sbjct: 565 ITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRD 624
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M ++PDI T+N+LI C+ + ++A F + G+ PD +Y+ LI K G
Sbjct: 625 MIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGM 684
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
FD+A +G P+ T +++ +++G E
Sbjct: 685 FDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/493 (22%), Positives = 207/493 (41%), Gaps = 67/493 (13%)
Query: 37 SVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRV 96
V C+P +YN+++ + + +M G +P VYT+ +++ C V
Sbjct: 174 GVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEV 233
Query: 97 AEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTL 156
+L+ M PN ++L+H + +
Sbjct: 234 DSACALLKDMTRHGCVPNAIVYQTLIHALXKV---------------------------- 265
Query: 157 LYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
+E +L +M G +P+ +TF+ + L L ++E ++D + RG
Sbjct: 266 -------GRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGF 318
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV------------------------ 252
P TY +LM L + G+ E LN V +V
Sbjct: 319 TPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHE 378
Query: 253 --------SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
++ +YN +I CK + A E+ EM+ + PN++T+ LI CK+
Sbjct: 379 SMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEG 438
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + R +L + G + +N +I LC+ + +DAL+ +M G P+ T+N
Sbjct: 439 RLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFN 498
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI LC + +L L+Q M + + + T+N LI +F R +++A K ML
Sbjct: 499 SLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFR 558
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G D+ +Y+ LIKAL ++G ++ F M G NP++ + N+++ L + G + A
Sbjct: 559 GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHA 618
Query: 485 HDIVKTSKERGIS 497
+ ++ RG++
Sbjct: 619 LEFLRDMIHRGLT 631
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 142/291 (48%), Gaps = 8/291 (2%)
Query: 214 RGV---KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
RGV +P F +Y ++++ L + + V ++ +V+ C VN
Sbjct: 173 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 232
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+D A + ++M PN + + TLI K V++ +LL +L G PD TFN
Sbjct: 233 VDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFND 292
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
I LC+ R +A + M+ G PN+ TY +L+ LC +G V + L K+
Sbjct: 293 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP--- 349
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFF-SMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+P++ FN LI + ++++A+ SML++G PD F+Y+ LI L K G A
Sbjct: 350 -NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSA 408
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
++ M+ GC P+ T ++++ ++GR EEA +++ +G++ +
Sbjct: 409 RELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNA 459
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 144/325 (44%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P YN +I L K + A +M + C+P+ TY ILI C+ G ++E
Sbjct: 383 VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEE 442
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ +M G G A N Y LI C ++V + + M + P+ T SL+
Sbjct: 443 ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 502
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +A L + + + NTL++ EA ++ M RG
Sbjct: 503 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 562
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + L ++ + + + + +G+ P + +L+ L + G +L
Sbjct: 563 DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFL 622
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ L ++ +YN +I+ CK A + +++ I P+ +T+NTLIS HCK+
Sbjct: 623 RDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKE 682
Query: 304 AEVHKTRELLVMLLECGFKPDKFTF 328
LL ++ GF P++ T+
Sbjct: 683 GMFDDAHLLLSRGVDSGFIPNEVTW 707
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
Query: 358 PNTITYNILIRSLCAIGDVARSL-RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
P +YN+++ L A G+ + + +F +M + ISP +YTF ++++ C +N+++ A
Sbjct: 180 PTFRSYNVVLDVLLA-GNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACA 238
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
M G P+ Y LI AL K GR +E + M GC PD T N + L
Sbjct: 239 LLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLC 298
Query: 477 QQGRFEEAHDIVKTSKERGISFKSF 501
+ R EA +V RG + SF
Sbjct: 299 KMLRIHEAAKLVDRMLLRGFTPNSF 323
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/487 (25%), Positives = 249/487 (51%), Gaps = 3/487 (0%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N + LV++ ++ + + M PD LI G CR+G +A ++++ +EG
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEG 165
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G P+V TY ++I G+C A + VL+ M +V P+ T +++ + +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A E+L R ++R+ + L+ +S +A +L +M DRG P+ T++ V
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
+ L+E L+ G +P T+ +++ ++ GR ++ ++ L + +
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+V ++N++I+ C+ ++ RA +I +M PN +++N L+ G CK+ ++ + E L
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++ G PD T+N+M+ LC+ + EDA++ L+++ G P ITYN +I L
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G ++++L +M+A + PD T+++L+ R K+++A K F +G+RP+ ++
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTF 522
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
++++ L K+ + D A + M GC P + +++E L +G +EA +++
Sbjct: 523 NSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCN 582
Query: 494 RGISFKS 500
+G+ +S
Sbjct: 583 KGLMKRS 589
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 201/449 (44%), Gaps = 46/449 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN +I K+ I+ A +MSV PD TYN ++ +C G + +A
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQA 223
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ +M P+V TYTILI+ C V + ++L+ M++R P+ T LV+G
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNG 283
Query: 125 VFRCLDPHKAFELLIRFMEREPLT----QKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + + I+F+ P + + N +L + + +A +L M +G
Sbjct: 284 ICK----EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ P TF+ + L L IL+ K G +P
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQP---------------------- 377
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
N SYN ++ FCK MDRA E M R P++VT+NT+++
Sbjct: 378 -------------NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CKD +V E+L L G P T+N++ID L +A + A+ L EM + P+T
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITY+ L+ L G V +++ F + + + P+ TFN+++ C+ + ++A
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVY 544
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEA 449
M+ G +P SY+ LI+ L G EA
Sbjct: 545 MINRGCKPTETSYTILIEGLAYEGMAKEA 573
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 178/388 (45%), Gaps = 10/388 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ +SP YN ++ +L S + A +M C PD TY ILI CR V +
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQ 257
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT----VR 119
A++L+ +M G P+V TY +L++G C R+ E + L M PN T +R
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGD 178
S+ R +D K L+ M R+ + +V N L+ L + A IL KM
Sbjct: 318 SMCS-TGRWMDAEK----LLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPK 372
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P S +++ + ++ L+ + RG P TY ++ AL K G+ +
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
LN + + +YN VID K +A ++ EMR +D+ P+ +T+++L+
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G ++ +V + + G +P+ TFNS++ LC+ + + A+D L M+ G P
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKP 552
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKM 386
+Y ILI L G +L L ++
Sbjct: 553 TETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 155/352 (44%), Gaps = 35/352 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P YN +++ + K +D A M C+P+ T+NI++ +C G +A
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L+ M G++P+V T+ ILI+ C + +LE M + PN + L+HG
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHG 388
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ K + I ++ER M RG P+
Sbjct: 389 FCK----EKKMDRAIEYLER-------------------------------MVSRGCYPD 413
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ +T L + + IL+ +G P TY +++ L KAG+ + + L+
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L + +Y+ ++ + +D A + E + PN VTFN+++ G CK
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTR 533
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ + + LV ++ G KP + ++ +I+ L ++AL+ L+E+ G+
Sbjct: 534 QTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 10/204 (4%)
Query: 293 FNTLISGHC-KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
F+TL SGH + H + +LE N+ + L R E+ L M
Sbjct: 75 FDTLASGHSNSNGNGHFSSANSSFVLE------DVESNNHLRQLVRTGELEEGFKFLENM 128
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
V G P+ I LIR C +G ++ ++ + ++ PD+ T+N +I +C+ +I
Sbjct: 129 VYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEI 188
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
A M + PD +Y+ ++++L SG+ +A + M Q C PD T ++
Sbjct: 189 NNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTIL 245
Query: 472 LETLVQQGRFEEAHDIVKTSKERG 495
+E + +A ++ ++RG
Sbjct: 246 IEATCRDSGVGQAMKLLDEMRDRG 269
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN ++ AL K ++ A Q+S C P TYN +I G+ + G +A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+ +M P+ TY+ L+ G +V E + + V PN T S++ G
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLG 528
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A + L+ + R + L+ L+ MA EA +L ++ ++G +
Sbjct: 529 LCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKR 588
Query: 185 SST 187
SS
Sbjct: 589 SSA 591
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 63/138 (45%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G SP YN VID L K+ A +M KPD TY+ L+ G+ R G
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VDEA++ + E +G PN T+ ++ G C ++ L M R P E +
Sbjct: 500 VDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTI 559
Query: 121 LVHGVFRCLDPHKAFELL 138
L+ G+ +A ELL
Sbjct: 560 LIEGLAYEGMAKEALELL 577
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 134/491 (27%), Positives = 238/491 (48%), Gaps = 2/491 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PST +N ++ ++ K+ + QM PD +T NILI+ C + A +
Sbjct: 65 PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ LG P+ T+T LI G C ++ + + + M PN T +L++G+ +
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + A LL R ME+ +V T ++ L + +EA + KM +G P+
Sbjct: 185 VGNTNAAIRLL-RSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIF 243
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L + +L+ I + P + +++AL K G+ E ++ +
Sbjct: 244 TYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMM 303
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ NV +YN ++D C + MD A ++ M APN++++NTLI+G+CK +
Sbjct: 304 IIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRM 363
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
K L + + P+ T+N+++ LC R +DA+ EMV G P+ TY IL
Sbjct: 364 DKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRIL 423
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ LC + ++ L + ++ + PDI + +I CR ++E A F ++ + GL
Sbjct: 424 LDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGL 483
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
RP+ +Y+ +I L + G DEA + F+ M+ NGC+PD T N I + L+Q A
Sbjct: 484 RPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQ 543
Query: 487 IVKTSKERGIS 497
+++ RG S
Sbjct: 544 LLQEMLARGFS 554
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 217/471 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P N +I++ N A+ ++ +PD T+ LI G+C G + +A
Sbjct: 97 GIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDA 156
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M G G+ PNV TY LI+G C R+L M++ N P+ S++
Sbjct: 157 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDS 216
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF L + + + +L++ L N +L +M + +P+
Sbjct: 217 LCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPD 276
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F V L + E ++D I RGV+P TY LM+ E + +
Sbjct: 277 VVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFD 336
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + NV SYN +I+ +CK+ MD+AT + EM +++ PN VT+NTL+ G C
Sbjct: 337 TMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVG 396
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ L ++ G PD T+ ++D LC+ ++A+ L + + P+ Y
Sbjct: 397 RLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYT 456
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+I +C G++ + +F + + + P++ T+ +I CR +++A K F M
Sbjct: 457 IVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGN 516
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G PD +Y+ + + L+++ A Q M G + D T+ L++E L
Sbjct: 517 GCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEML 567
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 205/473 (43%), Gaps = 35/473 (7%)
Query: 24 NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTY 83
N++D A F +M P +N L+ I + L QM+ G P+VYT
Sbjct: 46 NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 105
Query: 84 TILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME 143
ILI+ FC+ R F VL + + + P+ AT +L+ G+ C++
Sbjct: 106 NILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGL--CVE------------- 150
Query: 144 REPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
+A + KM G+ P T+ + L + N
Sbjct: 151 --------------------GKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNA 190
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
+L + + +P Y ++++L K + E + + + ++ +Y +I
Sbjct: 191 AIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIH 250
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
C + T + +M + I P++V F+T++ CK+ ++ + +++ M++ G +P
Sbjct: 251 SLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEP 310
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
+ T+N+++D C ++A+ MV G PN I+YN LI C I + ++ LF
Sbjct: 311 NVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLF 370
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
++M + P+ T+N L+ C + +++ A F M+ G PD +Y L+ L K
Sbjct: 371 EEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKK 430
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
DEA ++E + +PD ++++ + + G E A DI +G+
Sbjct: 431 SHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGL 483
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 162/381 (42%), Gaps = 35/381 (9%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRI--------- 58
P +Y ++ID+L K + A+ F +M PD FTY LIH +C +
Sbjct: 205 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTL 264
Query: 59 --------------------------GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
G + EA +V M G PNV TY L+DG C
Sbjct: 265 LNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCL 324
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
+ E +V + M PN + +L++G + KA L ++E + +
Sbjct: 325 QSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 384
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
NTL++ L + +A A+ +M G +P+ +T+ + L L+E +L T
Sbjct: 385 YNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 444
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+ P Y ++++ + +AG +++ L NV +Y ++I+ C+ ++D
Sbjct: 445 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLD 504
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A ++ EM +P+ T+NT+ G ++ E + +LL +L GF D T ++
Sbjct: 505 EANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 564
Query: 333 DCLCRAHRFEDALDCLSEMVE 353
+ LC + LSE V+
Sbjct: 565 EMLCDDKLDQSVKQILSEFVQ 585
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P+ R Y +I+ L + +D A F +M + C PD TYN + G+ +
Sbjct: 478 LSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKE 537
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE 104
A++L+++M G++ +V T T+L++ C+ K V ++L
Sbjct: 538 ALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILS 581
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 144/499 (28%), Positives = 246/499 (49%), Gaps = 24/499 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +PS YNAV+ AL + S+ A F M D P+ +TYNIL+ +C G EA
Sbjct: 118 GYAPSVLAYNAVLLALSDA-SLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +++ M G G PN TY L+ FC A V R++++M+E + PN T S+V+G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236
Query: 125 V---FRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRG 180
+ R D K F+ +++ E L V NTL+ + EA ++ +M +G
Sbjct: 237 ICKAGRMEDARKVFDEMVK----EGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKG 292
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P+ TF + + +L G++ +RG++ T+ L++ K G +
Sbjct: 293 IMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDAL 352
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + R+ +V YN +I+ +C V MD A E+ REM + + P++VT++T++S +
Sbjct: 353 LAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAY 412
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ + H +L +LE G PD T++S+I LC R DA M+ G+ P+
Sbjct: 413 CKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDE 472
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TY LI C G+V R+L L +M + PD+ T++ LI + + ++A++ F
Sbjct: 473 VTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFK 532
Query: 421 MLTLGLRPDNFSYSALIK-----------ALIKS----GRFDEAKQTFLSMEQNGCNPDS 465
+ P N Y AL++ AL+K G +EA + + S+ N D
Sbjct: 533 LYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDG 592
Query: 466 YTSNLILETLVQQGRFEEA 484
++++ ++G +A
Sbjct: 593 SVYSVLIHGHCREGNVMKA 611
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 141/282 (50%), Gaps = 1/282 (0%)
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G P Y ++ AL A R+ + + D + NV +YN+++ C A
Sbjct: 118 GYAPSVLAYNAVLLALSDASLP-SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ R+MR PN VT+NTL++ C+ EV + L+ M+ E G KP+ TFNS+++
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
+C+A R EDA EMV+ G+ P+ ++YN L+ C +G +L +F +M I PD
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+ TF +LI C+ +E+A M GL+ + +++ALI K G D+A
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M Q P N ++ GR +EA ++V+ + +G+
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGV 398
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 168/346 (48%), Gaps = 1/346 (0%)
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
L N +L LS+ S+ S A M G P T++ V L E +L
Sbjct: 124 LAYNAVLLALSDASLPS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRD 182
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
G P TY L+ A +AG +R ++ + + L N+ ++N V++ CK
Sbjct: 183 MRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGR 242
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
M+ A ++ EM +AP+ V++NTL+ G+CK H+ + + G PD TF S
Sbjct: 243 MEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTS 302
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I +C+A E A+ + EM E G+ N IT+ LI C G + +L ++M+ R
Sbjct: 303 LIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCR 362
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
I P + +NALI +C + ++++A + M G++PD +YS ++ A K+G A
Sbjct: 363 IQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAF 422
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
Q M +NG PD+ T + ++ L ++ R +AH + K G+
Sbjct: 423 QLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGL 468
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 209/482 (43%), Gaps = 31/482 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ +N+V++ + K+ ++ A F +M + PD +YN L+ G C++G EA
Sbjct: 222 GLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEA 281
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + +M G P+V T+T LI C A + ++ M+ER + NE T +L+ G
Sbjct: 282 LSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDG 341
Query: 125 VFRCLDPHKAFE----LLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDR 179
+ K F L +R M + + +VC N L+ EA ++R+M +
Sbjct: 342 FCK-----KGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAK 396
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G P+ T+ ++ D + + ++ GV P TY L+ L + R +
Sbjct: 397 GVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDA 456
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
++ L + +Y +ID CK ++RA + EM + P++VT++ LI+G
Sbjct: 457 HVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLING 516
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD-----CLSEMVE- 353
K A + + LL L P +++++ C CR + L C+ ++
Sbjct: 517 LSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRC-CRNAELKSVLALLKGFCMKGLMNE 575
Query: 354 ------------WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
W + + Y++LI C G+V ++L ++M +P+ + +L
Sbjct: 576 ADKVYQSILDRNWNL--DGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISL 633
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I+ + +A++ +L D + ALI +K G D M ++G
Sbjct: 634 IRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGL 693
Query: 462 NP 463
P
Sbjct: 694 LP 695
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 163/405 (40%), Gaps = 50/405 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P + ++I + K+ +++ A ++M + + T+ LI G C+ G +D+A
Sbjct: 292 GIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDA 351
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L V++M P+V Y LI+G+C R+ E ++ M+ + V P+ T +++
Sbjct: 352 LLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSA 411
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D H AF+L + +E L + ++L+ L +A + + M G P+
Sbjct: 412 YCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPD 471
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + ++ + D +K GV P TY +L+ L K+ R E R L
Sbjct: 472 EVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLF 531
Query: 245 HVFKDRLVSNVNSYNMVIDC---------------FCKVNMMDRATEICREMRDR----- 284
++ + V Y+ ++ C FC +M+ A ++ + + DR
Sbjct: 532 KLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLD 591
Query: 285 ------------------------------DIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
APN + +LI G + V + +++
Sbjct: 592 GSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQ 651
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
LL C D ++ID + + LD L M G+ P+
Sbjct: 652 QLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPS 696
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 21/151 (13%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P Y ++ID K +++ A +M PD TY++LI+G+ + E
Sbjct: 466 LGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKE 525
Query: 64 ALRLVKQMEGLGYAPNVYTYT---------------ILIDGFCNAKRVAEVFRVLEIMKE 108
A RL+ ++ P Y L+ GFC + E +V + + +
Sbjct: 526 AQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILD 585
Query: 109 RNVCPNEATVRSLVHG------VFRCLDPHK 133
RN + + L+HG V + L HK
Sbjct: 586 RNWNLDGSVYSVLIHGHCREGNVMKALSFHK 616
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 232/492 (47%), Gaps = 37/492 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P TR YN +++ LV +N + L M + + D T+NILI +C+ V A+
Sbjct: 164 IKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAI 223
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCP-NEATVRSLVHG 124
++++M G +P+ T+T ++ G+ + R+ E M E CP + TV L++G
Sbjct: 224 LMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYG-CPCTDVTVNVLING 282
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F ++ + Q L S EA + G+ P+
Sbjct: 283 ----------------FCKQGRIDQAL------------SFIQEAVS-------EGFRPD 307
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ V L ++D + G+ P TY L+ L K G E + L+
Sbjct: 308 QFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILD 367
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ N +YN +I CK N +D ATEI R + + I P++ TFN+LI G C +
Sbjct: 368 QMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSS 427
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+L + G +PD+FT+N +ID LC + + E+AL+ L EM G N + YN
Sbjct: 428 NHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYN 487
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C + + +F +M+ +S D T+N LI C+ ++E A + M+
Sbjct: 488 TLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIME 547
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GLRPD F+Y++L+ K+G +A +M +GCNPD T ++ L + GR + A
Sbjct: 548 GLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVA 607
Query: 485 HDIVKTSKERGI 496
++++ + +G+
Sbjct: 608 SRLLRSIQMKGM 619
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/500 (25%), Positives = 225/500 (45%), Gaps = 38/500 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP + ++ ++ ++D A +QM C T N+LI+G C+ G +D+A
Sbjct: 233 GLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQA 292
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +++ G+ P+ +TY L++G C V++ M + P+ T SL+ G
Sbjct: 293 LSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISG 352
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + +A ++L + + R+ + N ++ L + EA I R + +G LP+
Sbjct: 353 LCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPD 412
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + L + + + +G +P D +
Sbjct: 413 VCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRP---------------------DEF-- 449
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+YNM+ID C ++ A + +EM A N+V +NTLI G CK+
Sbjct: 450 ------------TYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNK 497
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + E+ + G D T+N++ID LC++ R EDA + +M+ G+ P+ TYN
Sbjct: 498 RIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYN 557
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ C GD+ ++ + Q M + +PDI T+ LI C+ +++ A + S+
Sbjct: 558 SLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMK 617
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ-QGRFEE 483
G+ +Y+ +I+AL K R EA + F M PD+ T ++ L G E
Sbjct: 618 GMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGE 677
Query: 484 AHDIVKTSKERG--ISFKSF 501
A D ERG F SF
Sbjct: 678 AVDFTVEMIERGNIPEFSSF 697
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 151/315 (47%)
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
STF+ + L + +++ G+ P +T+ +M+ + G R
Sbjct: 204 STFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQ 263
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + + N++I+ FCK +D+A +E P+ T+NTL++G CK
Sbjct: 264 MVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGH 323
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
E++ +L G PD +T+NS+I LC+ E+A+ L +MV PN +TYN
Sbjct: 324 AKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNA 383
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+I SLC V + + + + + I PD+ TFN+LIQ C + + A F M G
Sbjct: 384 IISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKG 443
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
RPD F+Y+ LI +L S + +EA ME NGC + N +++ + R EEA
Sbjct: 444 CRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAE 503
Query: 486 DIVKTSKERGISFKS 500
+I + +G+S S
Sbjct: 504 EIFDEMELQGVSRDS 518
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 125/250 (50%), Gaps = 6/250 (2%)
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
R+ + YN++++ N + M R I ++ TFN LI CK H+
Sbjct: 163 RIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCK---AHQV 219
Query: 310 RELLVMLLEC---GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
R ++M+ E G PD+ TF +++ + AL +MVE+G P +T N+L
Sbjct: 220 RPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVL 279
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I C G + ++L Q+ ++ PD +T+N L+ C++ + A + +ML GL
Sbjct: 280 INGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGL 339
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
PD ++Y++LI L K G +EA + M C+P++ T N I+ +L ++ R +EA +
Sbjct: 340 DPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATE 399
Query: 487 IVKTSKERGI 496
I + +GI
Sbjct: 400 IARLLTSKGI 409
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 166/405 (40%), Gaps = 36/405 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN +++ L K A M + PD +TYN LI G+C++G ++EA
Sbjct: 303 GFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEA 362
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++++ QM +PN TY +I C RV E + ++ + + P+ T SL+ G
Sbjct: 363 VKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQG 422
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A +L + + N L+ L ++ EA +L++M G
Sbjct: 423 LCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARN 482
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + + E I D +GV TY L++ L K+ R + + ++
Sbjct: 483 VVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMD 542
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L + +YN ++ FCK + +A +I + M P++VT+ TLISG CK
Sbjct: 543 QMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAG 602
Query: 305 EV-----------------------------------HKTRELLVMLLECGFKPDKFTFN 329
V H+ L +L+ PD T+
Sbjct: 603 RVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYK 662
Query: 330 SMIDCLCRAHR-FEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ LC +A+D EM+E G P ++ +L LC +
Sbjct: 663 IVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTL 707
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 35/219 (15%)
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
VM E KPD +N +++ L A++ + S MV + + T+NILI++LC
Sbjct: 157 VMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKA 216
Query: 374 GDVARSLRLFQKMQADRISPDIYTF----------------------------------- 398
V ++ + ++M + +SPD TF
Sbjct: 217 HQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTV 276
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
N LI FC+ +I++A ++ G RPD F+Y+ L+ L K G A + +M
Sbjct: 277 NVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLL 336
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G +PD YT N ++ L + G EEA I+ R S
Sbjct: 337 GGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCS 375
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICR-IG 59
I G+ + YN VI AL K N A F++M PD TY I+ G+C G
Sbjct: 614 IQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGG 673
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER 109
+ EA+ +M G P ++ +L +G C + ++++++ E+
Sbjct: 674 PIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEK 723
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/459 (29%), Positives = 229/459 (49%), Gaps = 4/459 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+SP Y ++I ++ ++DLA+ F +M + C P+ TY+ LI+G+C G VDEAL
Sbjct: 229 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL 288
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
++++M G P VYTYT+ I C + E ++ MK+R PN T +L+ G+
Sbjct: 289 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 348
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
R A L + ++ + + N L+ L S A I M G L +
Sbjct: 349 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 408
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + L G D+ + + + +K G P TY L+ G R L+
Sbjct: 409 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 468
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++ + +YN ++ F K ++ A+ +EM + + PN V++ LI GH KD +
Sbjct: 469 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGK 528
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V LL + E G P+ ++N++I+ L + +RF +A +MVE G+ PN ITY
Sbjct: 529 VDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTT 588
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI LC G + ++F M+ + P++YT+++LI C+ K ++AE+ M +G
Sbjct: 589 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIG 644
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
P +YS L+ L + GRF EA+Q M++ G PD
Sbjct: 645 CEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPD 683
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 140/484 (28%), Positives = 222/484 (45%), Gaps = 43/484 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI PS +N +I+ L K + A L Q+ PD FTY LI G CR +D A
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G PN TY+ LI+G CN RV E +LE M E+ + P T
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL---- 308
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
P+T L EA ++ +M RG P
Sbjct: 309 ---------------------PITA----------LCAIEHEEEAIELVARMKKRGCRPN 337
Query: 185 SSTFDYTVTCLVTGLD----LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
T+ T L++GL L G+ +K G+ P TY L+ L GR
Sbjct: 338 VQTY----TALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTAL 393
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + ++N +YN +I C +++A + +M P +VT+NTLI+G+
Sbjct: 394 KIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGY 453
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
V+ LL ++ E G +PD++T+N ++ + + E A EMVE G+ PN
Sbjct: 454 LTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNP 513
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
++Y LI G V +L L ++M+ +P++ ++NA+I + N+ +AEK
Sbjct: 514 VSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDK 573
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ GL P+ +Y+ LI L ++GR A + F ME+ C P+ YT + ++ L Q+G+
Sbjct: 574 MVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 633
Query: 481 FEEA 484
+EA
Sbjct: 634 ADEA 637
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/523 (24%), Positives = 222/523 (42%), Gaps = 39/523 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ Y I AL + A +M C+P+ TY LI G+ R+G ++ A
Sbjct: 298 GIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVA 357
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +M G PN TY LI+ C R + ++ M+ N T ++ G
Sbjct: 358 IGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKG 417
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D KA L + ++ PL + NTL+ + AA +L M + G P+
Sbjct: 418 LCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPD 477
Query: 185 SSTFDYTV-------------------------------TCLVTGLDLNETCGILDTFIK 213
T++ V T L+ G + I + +K
Sbjct: 478 EWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLK 537
Query: 214 R----GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
R G P +Y ++ L K R E ++ + + + L+ NV +Y +ID C+
Sbjct: 538 RMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNG 597
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
A +I +M R PNL T+++LI G C++ + + + E G +P T++
Sbjct: 598 RTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMS----EIGCEPTLDTYS 653
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+++ LCR RF +A + +M E G P+ Y L+ + C +V +L++F ++A
Sbjct: 654 TLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAK 713
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ + ALI + C+ ++E+A+ F +ML D ++ L+ L+K G D
Sbjct: 714 GFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLC 773
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
+ ME P+ T ++ L + G+ E+ + K
Sbjct: 774 MKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 816
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 168/381 (44%), Gaps = 35/381 (9%)
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
L NTL+ LS EA IL ++ P+ T+ + +L+ G+ D
Sbjct: 199 LTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDR 258
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
+K G P TY L+ L GR E L + + + V +Y + I C +
Sbjct: 259 MVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEH 318
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+ A E+ M+ R PN+ T+ LISG + ++ L +L+ G P+ T+N+
Sbjct: 319 EEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNA 378
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM---- 386
+I+ LC RF AL M G NT TYN +I+ LC GD+ +++ LF+KM
Sbjct: 379 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 438
Query: 387 ----------------------QADRI---------SPDIYTFNALIQSFCRMNKIEKAE 415
A R+ PD +T+N L+ F + K+E A
Sbjct: 439 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 498
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
F M+ GL P+ SY+ALI K G+ D A ME+ GCNP+ + N ++ L
Sbjct: 499 FYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL 558
Query: 476 VQQGRFEEAHDIVKTSKERGI 496
++ RF EA I E+G+
Sbjct: 559 SKENRFSEAEKICDKMVEQGL 579
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 161/339 (47%), Gaps = 14/339 (4%)
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
CNTLL +L+ M A + ++M + G P TF+ + L + E IL
Sbjct: 166 CNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIF 225
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK--DRLVS-----NVNSYNMVIDCF 265
+ + P TY L+ + +R L+ F DR+V N +Y+ +I+
Sbjct: 226 QYDLSPDVFTYTSLILGHCR-------NRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGL 278
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C +D A ++ EM ++ I P + T+ I+ C + EL+ + + G +P+
Sbjct: 279 CNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 338
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T+ ++I L R + E A+ +M++ G+ PNT+TYN LI LC G + +L++F
Sbjct: 339 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 398
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M+ + T+N +I+ C IEKA F ML +G P +Y+ LI + G
Sbjct: 399 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 458
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ A + M++NGC PD +T N ++ + G+ E A
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESA 497
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 140/294 (47%), Gaps = 39/294 (13%)
Query: 230 LYKAGRDVEGDR----YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
+ KA R+ E R +LN + ++ S N ++ K M++ A + ++M +
Sbjct: 134 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 193
Query: 286 IAPNLVTFNTLIS-----------------------------------GHCKDAEVHKTR 310
I P+L+TFNTLI+ GHC++ +
Sbjct: 194 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAF 253
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+ +++ G P+ T++++I+ LC R ++ALD L EM+E G+ P TY + I +L
Sbjct: 254 GVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITAL 313
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
CAI ++ L +M+ P++ T+ ALI R+ K+E A + ML GL P+
Sbjct: 314 CAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNT 373
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+Y+ALI L GRF A + F ME +G ++ T N I++ L G E+A
Sbjct: 374 VTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKA 427
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 120/289 (41%), Gaps = 36/289 (12%)
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCK-VNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
LN + +DR+ + + +++ C+ + R + E+ +L + NTL+
Sbjct: 115 LNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLA 174
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL-------------------------- 335
K V R L +L G +P TFN++I+ L
Sbjct: 175 KFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVF 234
Query: 336 ---------CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
CR + A MV+ G PN++TY+ LI LC G V +L + ++M
Sbjct: 235 TYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM 294
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
I P +YT+ I + C + E+A + M G RP+ +Y+ALI L + G+
Sbjct: 295 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKL 354
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ A + M + G P++ T N ++ L GRF A I + G
Sbjct: 355 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHG 403
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 114/239 (47%), Gaps = 10/239 (4%)
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
Y ++CF ++M++R +RDR AP +I + E+ + + L +
Sbjct: 104 YKHNMNCF--ISMLNRL------VRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEIS 155
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
GF ++ N+++ L + E A + +M+ G+ P+ +T+N LI L G V
Sbjct: 156 GMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVR 215
Query: 378 RS-LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+ L L Q Q D +SPD++T+ +LI CR ++ A F M+ G P++ +YS L
Sbjct: 216 EAELILSQIFQYD-LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTL 274
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
I L GR DEA M + G P YT L + L EEA ++V K+RG
Sbjct: 275 INGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRG 333
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 120/290 (41%), Gaps = 39/290 (13%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G +P+ YNAVI+ L K N A +M P+ TY LI G+CR G
Sbjct: 542 MGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQF 601
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ ME PN+YTY+ LI G C + E R+ EI E P T +LV
Sbjct: 602 AFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCE----PTLDTYSTLVS 657
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R K RF E E L ++ M +RG+ P
Sbjct: 658 GLCR-----KG-----RFYEAEQL-------------------------VKDMKERGFCP 682
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ + + L+++ I + +G + S Y L+ AL KAG+ E
Sbjct: 683 DREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALF 742
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
+++ + ++ + +++D K +D ++ M ++ PN+ T+
Sbjct: 743 DNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 792
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 250/492 (50%), Gaps = 8/492 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ A+ K D+ ++M + +TYNILI+ CR + AL L
Sbjct: 45 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 104
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P++ T + L++G+C+ KR+++ +++ M E P+ T +L+HG+F
Sbjct: 105 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 164
Query: 128 CLDPHKAFELLIRFMER--EP--LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+A L+ R ++R +P +T +V N L R + A +L KM
Sbjct: 165 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL----ALNLLNKMEAAKIEA 220
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ F+ + L +++ + +G++P TY L+ L GR + + L
Sbjct: 221 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 280
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + ++ N+ ++N +ID F K A ++ +M R I P++ T+N+L++G C
Sbjct: 281 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 340
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ K +++ ++ PD T+N++I C++ R ED + EM G+ +T+TY
Sbjct: 341 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 400
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI+ L GD + ++F++M +D + PDI T++ L+ C K+EKA + F M
Sbjct: 401 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 460
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
++ D + Y+ +I+ + K+G+ D+ F S+ G P+ T N ++ L + +E
Sbjct: 461 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 520
Query: 484 AHDIVKTSKERG 495
A+ ++K KE G
Sbjct: 521 AYALLKKMKEDG 532
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 221/466 (47%), Gaps = 43/466 (9%)
Query: 26 IDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTI 85
+D A F M + P +N L+ I ++ D + L ++M+ L +YTY I
Sbjct: 28 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 87
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
LI+ FC +++ +L M + P+ T+ SL++G
Sbjct: 88 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGY-------------------- 127
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN--- 202
+ S+A A++ +M + GY P++ TF T L+ GL L+
Sbjct: 128 ---------------CHGKRISDAVALVDQMVEMGYRPDTITF----TTLIHGLFLHNKA 168
Query: 203 -ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
E ++D ++RG +P TY +++ L K G LN + ++ ++V +N +
Sbjct: 169 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 228
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
ID CK +D A + +EM + I PN+VT+++LIS C +LL ++E
Sbjct: 229 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 288
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
P+ TFN++ID + +F +A +M++ + P+ TYN L+ C + ++ +
Sbjct: 289 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 348
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
+F+ M + PD+ T+N LI+ FC+ ++E + F M GL D +Y+ LI+ L
Sbjct: 349 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 408
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
G D A++ F M +G PD T +++L+ L G+ E+A ++
Sbjct: 409 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 454
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 222/486 (45%), Gaps = 35/486 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG PS +++++ I A QM +PD T+ LIHG+ E
Sbjct: 111 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 170
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ LV +M G PN+ TY ++++G C +L M+ + EA V
Sbjct: 171 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI---EADV----- 222
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
++ NT++ L +A + ++M +G P
Sbjct: 223 ---------------------------VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 255
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ ++CL + ++ +L I++ + P T+ L++A K G+ VE ++
Sbjct: 256 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 315
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K + ++ +YN +++ FC + +D+A ++ M +D P++VT+NTLI G CK
Sbjct: 316 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 375
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V EL + G D T+ ++I L ++A +MV GVPP+ +TY
Sbjct: 376 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 435
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+IL+ LC G + ++L +F MQ I DIY + +I+ C+ K++ F S+
Sbjct: 436 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 495
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G++P+ +Y+ +I L EA M+++G P+S T N ++ ++ G
Sbjct: 496 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAA 555
Query: 484 AHDIVK 489
+ ++++
Sbjct: 556 SAELIR 561
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 175/368 (47%), Gaps = 4/368 (1%)
Query: 133 KAFELLIRF---MEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
K F+++I M+R + L N L+ S S A A+L KM GY P T
Sbjct: 61 KKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTL 120
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ G +++ ++D ++ G +P T+ L+ L+ + E ++ + +
Sbjct: 121 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 180
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
N+ +Y +V++ CK D A + +M I ++V FNT+I CK V
Sbjct: 181 RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 240
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
L + G +P+ T++S+I CLC R+ DA LS+M+E + PN +T+N LI
Sbjct: 241 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 300
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
+ G + +L+ M I PDI+T+N+L+ FC ++++KA++ F M++ P
Sbjct: 301 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 360
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
D +Y+ LIK KS R ++ + F M G D+ T +++ L G + A +
Sbjct: 361 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 420
Query: 489 KTSKERGI 496
K G+
Sbjct: 421 KQMVSDGV 428
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 204/483 (42%), Gaps = 40/483 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P T + +I L N A +M C+P+ TY ++++G+C+ G D
Sbjct: 146 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 205
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L+ +ME +V + +ID C + V + + + M+ + + PN T SL+
Sbjct: 206 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI- 264
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
CL + + S+A+ +L M ++ P
Sbjct: 265 ---SCLCSYGRW-------------------------------SDASQLLSDMIEKKINP 290
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
TF+ + V E + D IKR + P TY L+ R + +
Sbjct: 291 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 350
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +V +YN +I FCK ++ TE+ REM R + + VT+ TLI G D
Sbjct: 351 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 410
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ +++ ++ G PD T++ ++D LC + E AL+ M + + + Y
Sbjct: 411 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 470
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+I +C G V LF + + P++ T+N +I C +++A M
Sbjct: 471 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 530
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN--PDSYTSNLILETLVQQGRF 481
G P++ +Y+ LI+A ++ G D+A L E C D+ T L+ ++ GR
Sbjct: 531 DGPLPNSGTYNTLIRAHLRDG--DKAASAELIREMRSCRFVGDASTIGLV-ANMLHDGRL 587
Query: 482 EEA 484
+++
Sbjct: 588 DKS 590
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 190/419 (45%), Gaps = 4/419 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y V++ L K DLA +M + + D +N +I +C+ VD+A
Sbjct: 182 GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 241
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L K+ME G PNV TY+ LI C+ R ++ ++L M E+ + PN T +L+
Sbjct: 242 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 301
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +L ++R N+L+ + +A + M + P+
Sbjct: 302 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 361
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + + + RG+ TY L++ L+ G +
Sbjct: 362 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 421
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D + ++ +Y++++D C +++A E+ M+ +I ++ + T+I G CK
Sbjct: 422 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 481
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V +L L G KP+ T+N+MI LC ++A L +M E G PN+ TYN
Sbjct: 482 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYN 541
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LIR+ GD A S L ++M++ R D T I M + +K+F ML+
Sbjct: 542 TLIRAHLRDGDKAASAELIREMRSCRFVGDAST----IGLVANMLHDGRLDKSFLDMLS 596
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 133/284 (46%), Gaps = 35/284 (12%)
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K R + ++ +N ++ K+ D + +M+ +I L T+N LI+ C+ +++
Sbjct: 40 KSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQIS 99
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI------ 361
LL +++ G++P T +S+++ C R DA+ + +MVE G P+TI
Sbjct: 100 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 159
Query: 362 -----------------------------TYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
TY +++ LC GD +L L KM+A +I
Sbjct: 160 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 219
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
D+ FN +I S C+ ++ A F M T G+RP+ +YS+LI L GR+ +A Q
Sbjct: 220 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 279
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M + NP+ T N +++ V++G+F EA + +R I
Sbjct: 280 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 323
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ T Y +I L D A F+QM D PD TY+IL+ G+C G
Sbjct: 388 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 447
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++AL + M+ ++Y YT +I+G C A +V + + + + + V PN T +
Sbjct: 448 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 507
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ +A+ LL + E PL NTL+ + + +A ++R+M
Sbjct: 508 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR 567
Query: 181 YLPESSTFDYTVTCLVTG 198
++ ++ST L G
Sbjct: 568 FVGDASTIGLVANMLHDG 585
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 134/481 (27%), Positives = 230/481 (47%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ YN +ID L K+ ++D A Q M K D TY+ +I G+C+ VD A
Sbjct: 196 TPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEG 255
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+++ M G P+V TY +IDG C A+ V VL+ M ++ V P+ T +++ G+
Sbjct: 256 VLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLC 315
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ +A +L ++++ N L++ + E L +M RG P+
Sbjct: 316 KAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVV 375
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L E I I++G+KP + Y +L+ G + L+ +
Sbjct: 376 TYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLM 435
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ + N +N+V+ + K M+D A I M ++P++VT+ LI CK V
Sbjct: 436 VANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRV 495
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
++ G P+ FNS++ LC R+E A + EM + GV PN + +N +
Sbjct: 496 DDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTI 555
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ +LC G V + RL M+ + P++ ++N LI C + ++A + M+++GL
Sbjct: 556 MCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGL 615
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+PD SY L++ K+GR D A F M + G P + T + IL+ L RF EA +
Sbjct: 616 KPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKE 675
Query: 487 I 487
+
Sbjct: 676 L 676
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 138/529 (26%), Positives = 247/529 (46%), Gaps = 41/529 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN +ID L K+ ++D A Q M KPD TYN +I G+C+ VD A
Sbjct: 264 GVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRA 323
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ M P++ TY LI G+ + EV R LE M R + P+ T L+
Sbjct: 324 DGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDY 383
Query: 125 V---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ +C + K F +IR + +T + LL+ + ++ +L M G
Sbjct: 384 LCKNGKCTEARKIFYCMIRKGIKPNVT---IYGILLHGYAARGAIADLTDLLDLMVANGI 440
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P + F+ + ++E I + G+ P TY +L++AL K GR +
Sbjct: 441 SPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVL 500
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
N + D + N +N ++ C V+ ++A E+ EM D+ + PN+V FNT++ C
Sbjct: 501 KFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLC 560
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ +V + L+ + G +P+ ++N++I C A R ++A L MV G+ P+ I
Sbjct: 561 NEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLI 620
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISP---------------------------- 393
+Y+ L+R C G + + LF++M ++P
Sbjct: 621 SYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNM 680
Query: 394 -------DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
DIYT+N ++ C+ N +++A K F S+ + LRP+ +++ +I L K GR
Sbjct: 681 IKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRK 740
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+A F S+ +G P+ T ++++ ++Q+G +E ++ ++ G
Sbjct: 741 KDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSG 789
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 142/498 (28%), Positives = 237/498 (47%), Gaps = 10/498 (2%)
Query: 9 STRLYNAVIDALVK---SNSIDLAYLKFQQMS---VDQCKPDRFTYNILIHGICRIGVVD 62
S R +N +++ + + S++ +LA F +M+ ++ +PD TY+IL CR+G ++
Sbjct: 48 SVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIE 107
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV-LEIMKERNVCPNEATVRSL 121
+ G+ N L++G C+AKRV E + L M E PN + +L
Sbjct: 108 HGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTL 167
Query: 122 VHGVFRCLDPHKAFELLIRFMEREP--LTQKLVC-NTLLYRLSNNSMASEAAAILRKMGD 178
+ G+ +A ELL E T +V NT++ L A +L+ M D
Sbjct: 168 LKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMID 227
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+G + T+ + L ++ G+L I +GVKP TY +++ L KA
Sbjct: 228 KGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDR 287
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ L H+ + +V +YN +ID CK +DRA + + M D+D+ P++ T+N LI
Sbjct: 288 AEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIH 347
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G+ E + L + G PD T++ ++D LC+ + +A M+ G+ P
Sbjct: 348 GYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKP 407
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N Y IL+ A G +A L M A+ ISP+ Y FN ++ ++ + I++A F
Sbjct: 408 NVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIF 467
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M GL PD +Y LI AL K GR D+A F M +G P+S N ++ L
Sbjct: 468 SRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTV 527
Query: 479 GRFEEAHDIVKTSKERGI 496
R+E+A ++ ++G+
Sbjct: 528 DRWEKAEELFFEMWDQGV 545
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 119/539 (22%), Positives = 239/539 (44%), Gaps = 72/539 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN +ID L K+ ++D A Q M KPD TYN LIHG G E
Sbjct: 299 GVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEV 358
Query: 65 LRLVKQMEGLGYAPNVYTYTILID-----GFCNAKR------------------------ 95
+R +++M G P+V TY++L+D G C R
Sbjct: 359 VRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHG 418
Query: 96 ------VAEVFRVLEIMKERNVCPN-------------EATVRSLVHGVFRCLDPH---- 132
+A++ +L++M + PN +A + +H +F + H
Sbjct: 419 YAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMH-IFSRMSQHGLSP 477
Query: 133 ----------------KAFELLIRF--MEREPLT-QKLVCNTLLYRLSNNSMASEAAAIL 173
+ + +++F M + +T +V N+L+Y L +A +
Sbjct: 478 DVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELF 537
Query: 174 RKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
+M D+G P F+ + L + ++D+ + GV+P +Y L+ A
Sbjct: 538 FEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLA 597
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
GR E + L+ + L ++ SY+ ++ +CK +D A + REM + + P VT+
Sbjct: 598 GRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTY 657
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
+T++ G + +EL + +++ G + D +T+N +++ LC+ + ++A +
Sbjct: 658 STILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCS 717
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
+ PN IT+ I+I L G ++ LF + + + P++ T+ ++++ + +++
Sbjct: 718 KDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDE 777
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
+ F +M G PD+ +A+I++L+ G A +++ + ++ T++L++
Sbjct: 778 FDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLI 836
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 195/442 (44%), Gaps = 46/442 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP+ ++N V+ A K ID A F +MS PD TY ILI +C++G VD+A
Sbjct: 439 GISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDA 498
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ QM G PN + L+ G C R + + M ++ V PN +++
Sbjct: 499 VLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCN 558
Query: 125 VFRCLDPH-KAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ C + + LI MER + ++ NTL+ EAA +L M G
Sbjct: 559 L--CNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLK 616
Query: 183 PESSTFDYTVTCLV-TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P+ ++D + TG N C + +++GV P TY +++ L+ R E
Sbjct: 617 PDLISYDTLLRGYCKTGRIDNAYC-LFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKE 675
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
++ K ++ +YN++++ CK N +D A +I + + +D+ PN++TF
Sbjct: 676 LYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTI------ 729
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
MID L + R +DA+D + + G+ PN +
Sbjct: 730 -----------------------------MIDVLFKGGRKKDAMDLFASIPSHGLVPNVV 760
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY I+++++ G + LF M+ +PD NA+I+S +I +A A+ S
Sbjct: 761 TYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRA-GAYLSK 819
Query: 422 LTLGLRPDNFSYSALIKALIKS 443
+ NFS A +L+ S
Sbjct: 820 ID----EMNFSLEASTTSLLIS 837
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 152/369 (41%), Gaps = 37/369 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRI------ 58
G+SP Y +IDAL K +D A LKF QM D P+ +N L++G+C +
Sbjct: 474 GLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKA 533
Query: 59 -----------------------------GVVDEALRLVKQMEGLGYAPNVYTYTILIDG 89
G V A RL+ ME +G PNV +Y LI G
Sbjct: 534 EELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGG 593
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C A R E ++L++M + P+ + +L+ G + A+ L R M R+ +T
Sbjct: 594 HCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAY-CLFREMLRKGVTP 652
Query: 150 KLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
V +T+L L + SEA + M G + T++ + L ++E I
Sbjct: 653 GAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIF 712
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ + ++P T+ ++++ L+K GR + + LV NV +Y +++ +
Sbjct: 713 QSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQE 772
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
++D + M P+ V N +I E+ + L + E F + T
Sbjct: 773 GLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTT 832
Query: 329 NSMIDCLCR 337
+ +I R
Sbjct: 833 SLLISLFSR 841
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 9/163 (5%)
Query: 341 FEDALDCLSEMVEWGVPPNTITYN----ILIRSLCAIGDVARSLRLFQKMQ---ADRISP 393
+DAL E++ P + +N ++ R+ C+ ++ LF +M ++++ P
Sbjct: 30 IDDALKLFDELLPHARPASVRAFNHLLNVVARARCS-STSELAVSLFNRMARACSNKVRP 88
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
D+ T++ L FCR+ +IE AF +L G R + + L+ L + R DEA
Sbjct: 89 DLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDIL 148
Query: 454 L-SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
L M + GC P+ + N +L+ L + R EEA +++ T E G
Sbjct: 149 LRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDG 191
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 80/193 (41%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P Y+ ++ K+ ID AY F++M P TY+ ++ G+ E
Sbjct: 613 VGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSE 672
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L M G ++YTY I+++G C V E F++ + + +++ PN T ++
Sbjct: 673 AKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMID 732
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+F+ A +L + + ++ + + E + M G P
Sbjct: 733 VLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTP 792
Query: 184 ESSTFDYTVTCLV 196
+S + + L+
Sbjct: 793 DSVMLNAIIRSLL 805
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 83/231 (35%), Gaps = 35/231 (15%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ YN +I + D A M KPD +Y+ L+ G C+ G +D
Sbjct: 578 VGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDN 637
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L ++M G P TY+ ++ G + +R +E
Sbjct: 638 AYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSE------------------------- 672
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
A EL + ++ N +L L + EA I + + + P
Sbjct: 673 ----------AKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRP 722
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
TF + L G + + + G+ P TY ++M+ + + G
Sbjct: 723 NIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEG 773
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 237/471 (50%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + + ++ K A QM + + ++ N+LI+ +CR+ VD A+ +
Sbjct: 94 PSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSV 153
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LG P+ T+ LI+G CN ++ E + M PN + ++++G+ +
Sbjct: 154 MGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCK 213
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ A + + + + NT++ L + + +EA L +M DRG P+ T
Sbjct: 214 NGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVT 273
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + + LNE + + R V P T+ +L++ L K G E +
Sbjct: 274 YNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMT 333
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ N +YN ++D +C N MD A ++ M + APNL ++N LI+G+CK ++
Sbjct: 334 EKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMN 393
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ + LL + E PD T+++++ LC+ R +AL+ EM G+ P+ + Y+IL+
Sbjct: 394 EAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILL 453
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
C G + +L+L ++M RI P+I + LI+ K+E A++ F + G+R
Sbjct: 454 DGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIR 513
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
PD ++Y+ +IK L+K G DEA + F ME +G PDS + N+I++ +Q
Sbjct: 514 PDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQN 564
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 133/497 (26%), Positives = 241/497 (48%), Gaps = 8/497 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ G++ + N +I+ L + + +D A +M +PD T+N LI+G+C G
Sbjct: 122 MDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGK 181
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ EA+ L +M G+ PNV +Y +I+G C RV M++ PN T +
Sbjct: 182 IKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNT 241
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ + + ++A E L ++R + NT+L+ + +EA + ++M R
Sbjct: 242 IIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRN 301
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P++ TF+ V L ++E + +T ++G +P TY LM+ + E
Sbjct: 302 VMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAI 361
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L + N++SYN++I+ +CK M+ A + EM ++++ P+ VT++TL+ G
Sbjct: 362 KVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGL 421
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ + L + G PD ++ ++D C+ ++AL L EM E + PN
Sbjct: 422 CQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNI 481
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
I Y ILIR + G + + LF K+ AD I PDI+T+N +I+ + ++A + F
Sbjct: 482 ILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRK 541
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G PD+ SY+ +I+ +++ A Q M + DS T ++L+
Sbjct: 542 MEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDL------ 595
Query: 481 FEEAHDIVKTSKERGIS 497
E+HD + + RG S
Sbjct: 596 --ESHDEIISRFMRGSS 610
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 167/357 (46%)
Query: 140 RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL 199
R + P + L ++ S A ++ +M G + + + CL
Sbjct: 86 RMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLS 145
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
++ ++ K G++P T+ L+ L G+ E N + NV SYN
Sbjct: 146 HVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYN 205
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
VI+ CK A + R+M PN+VT+NT+I CKD V++ E L +++
Sbjct: 206 TVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDR 265
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G PD T+N+++ C + +A EMV V P+T+T+NIL+ LC G V+ +
Sbjct: 266 GIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEA 325
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+ + M P+ YT+NAL+ +C N++++A K M+ G P+ SY+ LI
Sbjct: 326 RCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILING 385
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
KS R +EAK+ M + PD+ T + +++ L Q GR EA ++ K G+
Sbjct: 386 YCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGL 442
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 65/138 (47%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+DAL MV P+ + + + S+ + ++ L +M ++ ++Y+ N L
Sbjct: 78 DDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVL 137
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I CR++ ++ A M LG++PD +++ LI L G+ EA F M +G
Sbjct: 138 INCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGH 197
Query: 462 NPDSYTSNLILETLVQQG 479
P+ + N ++ L + G
Sbjct: 198 EPNVISYNTVINGLCKNG 215
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 250/492 (50%), Gaps = 8/492 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ A+ K D+ ++M + +TYNILI+ CR + AL L
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P++ T + L++G+C+ KR+++ +++ M E P+ T +L+HG+F
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 128 CLDPHKAFELLIRFMER--EP--LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+A L+ R ++R +P +T +V N L R + A +L KM
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL----ALNLLNKMEAAKIEA 258
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ F+ + L +++ + +G++P TY L+ L GR + + L
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + ++ N+ ++N +ID F K A ++ +M R I P++ T+N+L++G C
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ K +++ ++ PD T+N++I C++ R ED + EM G+ +T+TY
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI+ L GD + ++F++M +D + PDI T++ L+ C K+EKA + F M
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
++ D + Y+ +I+ + K+G+ D+ F S+ G P+ T N ++ L + +E
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 484 AHDIVKTSKERG 495
A+ ++K KE G
Sbjct: 559 AYALLKKMKEDG 570
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 221/466 (47%), Gaps = 43/466 (9%)
Query: 26 IDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTI 85
+D A F M + P +N L+ I ++ D + L ++M+ L +YTY I
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
LI+ FC +++ +L M + P+ T+ SL++G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGY-------------------- 165
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN--- 202
+ S+A A++ +M + GY P++ TF T L+ GL L+
Sbjct: 166 ---------------CHGKRISDAVALVDQMVEMGYRPDTITF----TTLIHGLFLHNKA 206
Query: 203 -ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
E ++D ++RG +P TY +++ L K G LN + ++ ++V +N +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
ID CK +D A + +EM + I PN+VT+++LIS C +LL ++E
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
P+ TFN++ID + +F +A +M++ + P+ TYN L+ C + ++ +
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
+F+ M + PD+ T+N LI+ FC+ ++E + F M GL D +Y+ LI+ L
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
G D A++ F M +G PD T +++L+ L G+ E+A ++
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 492
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 222/486 (45%), Gaps = 35/486 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG PS +++++ I A QM +PD T+ LIHG+ E
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ LV +M G PN+ TY ++++G C +L M+ + EA V
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI---EADV----- 260
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
++ NT++ L +A + ++M +G P
Sbjct: 261 ---------------------------VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 293
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ ++CL + ++ +L I++ + P T+ L++A K G+ VE ++
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K + ++ +YN +++ FC + +D+A ++ M +D P++VT+NTLI G CK
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V EL + G D T+ ++I L ++A +MV GVPP+ +TY
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 473
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+IL+ LC G + ++L +F MQ I DIY + +I+ C+ K++ F S+
Sbjct: 474 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 533
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G++P+ +Y+ +I L EA M+++G P+S T N ++ ++ G
Sbjct: 534 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAA 593
Query: 484 AHDIVK 489
+ ++++
Sbjct: 594 SAELIR 599
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 175/368 (47%), Gaps = 4/368 (1%)
Query: 133 KAFELLIRF---MEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
K F+++I M+R + L N L+ S S A A+L KM GY P T
Sbjct: 99 KKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTL 158
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ G +++ ++D ++ G +P T+ L+ L+ + E ++ + +
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
N+ +Y +V++ CK D A + +M I ++V FNT+I CK V
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 278
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
L + G +P+ T++S+I CLC R+ DA LS+M+E + PN +T+N LI
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
+ G + +L+ M I PDI+T+N+L+ FC ++++KA++ F M++ P
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
D +Y+ LIK KS R ++ + F M G D+ T +++ L G + A +
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 489 KTSKERGI 496
K G+
Sbjct: 459 KQMVSDGV 466
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 204/483 (42%), Gaps = 40/483 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P T + +I L N A +M C+P+ TY ++++G+C+ G D
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L+ +ME +V + +ID C + V + + + M+ + + PN T SL+
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI- 302
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
CL + + S+A+ +L M ++ P
Sbjct: 303 ---SCLCSYGRW-------------------------------SDASQLLSDMIEKKINP 328
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
TF+ + V E + D IKR + P TY L+ R + +
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +V +YN +I FCK ++ TE+ REM R + + VT+ TLI G D
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 448
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ +++ ++ G PD T++ ++D LC + E AL+ M + + + Y
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+I +C G V LF + + P++ T+N +I C +++A M
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN--PDSYTSNLILETLVQQGRF 481
G P++ +Y+ LI+A ++ G D+A L E C D+ T L+ ++ GR
Sbjct: 569 DGPLPNSGTYNTLIRAHLRDG--DKAASAELIREMRSCRFVGDASTIGLV-ANMLHDGRL 625
Query: 482 EEA 484
+++
Sbjct: 626 DKS 628
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 190/419 (45%), Gaps = 4/419 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y V++ L K DLA +M + + D +N +I +C+ VD+A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 279
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L K+ME G PNV TY+ LI C+ R ++ ++L M E+ + PN T +L+
Sbjct: 280 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 339
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +L ++R N+L+ + +A + M + P+
Sbjct: 340 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + + + RG+ TY L++ L+ G +
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D + ++ +Y++++D C +++A E+ M+ +I ++ + T+I G CK
Sbjct: 460 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 519
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V +L L G KP+ T+N+MI LC ++A L +M E G PN+ TYN
Sbjct: 520 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYN 579
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LIR+ GD A S L ++M++ R D T I M + +K+F ML+
Sbjct: 580 TLIRAHLRDGDKAASAELIREMRSCRFVGDAST----IGLVANMLHDGRLDKSFLDMLS 634
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 133/284 (46%), Gaps = 35/284 (12%)
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K R + ++ +N ++ K+ D + +M+ +I L T+N LI+ C+ +++
Sbjct: 78 KSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQIS 137
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI------ 361
LL +++ G++P T +S+++ C R DA+ + +MVE G P+TI
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 362 -----------------------------TYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
TY +++ LC GD +L L KM+A +I
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 257
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
D+ FN +I S C+ ++ A F M T G+RP+ +YS+LI L GR+ +A Q
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M + NP+ T N +++ V++G+F EA + +R I
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ T Y +I L D A F+QM D PD TY+IL+ G+C G
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++AL + M+ ++Y YT +I+G C A +V + + + + + V PN T +
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ +A+ LL + E PL NTL+ + + +A ++R+M
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR 605
Query: 181 YLPESSTFDYTVTCLVTG 198
++ ++ST L G
Sbjct: 606 FVGDASTIGLVANMLHDG 623
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 141/495 (28%), Positives = 229/495 (46%), Gaps = 34/495 (6%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G+ +T YN +++ LV N + L + M +PD T+NILI +CR +
Sbjct: 154 FGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRP 213
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+++ME G P+ T+T ++ GF + RV E M E TV LV+
Sbjct: 214 AILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVN 273
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + E +RF+E L + G+ P
Sbjct: 274 GFCK----EGRIEEALRFIEEMSLRE------------------------------GFFP 299
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF+ V L + ++D ++ G P TY L+ L K G E + L
Sbjct: 300 DKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVL 359
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + + N +YN +I CK N ++ AT++ + + I P++ T+N+LI G C
Sbjct: 360 NQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLS 419
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
EL + G PD+FT+N +ID LC + ++AL+ L EM G N ITY
Sbjct: 420 RNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITY 479
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI C +A + +F +M+ +S + T+N LI C+ ++E+A + M+
Sbjct: 480 NTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIM 539
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GLRPD F+Y++L+ K+G +A +M +GC PD T ++ L + GR E
Sbjct: 540 EGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEA 599
Query: 484 AHDIVKTSKERGISF 498
A +++T + +GI+
Sbjct: 600 ATKLLRTIQMKGINL 614
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 199/452 (44%), Gaps = 7/452 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P +N +++ L K+ + A M + PD +TYN LI G+C++G VDEA
Sbjct: 296 GFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEA 355
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++++ QM +PN TY +I C +V E ++ ++ + + P+ T SL+ G
Sbjct: 356 VKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQG 415
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A EL + + N L+ L EA +L++M G
Sbjct: 416 LCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARN 475
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + E I D +GV TY L++ L K+ R E + ++
Sbjct: 476 VITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMD 535
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L + +YN ++ FCK + +A +I + M P++VT+ TLI+G CK
Sbjct: 536 QMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAG 595
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V +LL + G +N +I L R R ++A+ EM+E P+ +TY
Sbjct: 596 RVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYK 655
Query: 365 ILIRSLC-AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
I+ R LC G + ++ +M P+ +F L + + + ++
Sbjct: 656 IVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMV----GTLIKLID 711
Query: 424 LGLRPDNFSYS--ALIKALIKSGRFDEAKQTF 453
+ + FS + +I+ +K ++ +A T
Sbjct: 712 MVMEKAKFSDNEVTMIRGFLKISKYQDALATL 743
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 36/220 (16%)
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
M +E G + +N +++ L ++ + S MV G+ P+ T+NILI++LC
Sbjct: 149 AMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRA 208
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQ------------------------------ 403
+ ++ L ++M+ + PD TF ++Q
Sbjct: 209 HQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTV 268
Query: 404 -----SFCRMNKIEKAEKAFFSM-LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
FC+ +IE+A + M L G PD ++++ L+ L K+G A + M
Sbjct: 269 NVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMML 328
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ G +PD YT N ++ L + G +EA ++ ER S
Sbjct: 329 REGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCS 368
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICR-IG 59
I GI+ + YN VI AL + A F++M PD TY I+ G+C+ G
Sbjct: 607 IQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGG 666
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE-IMKERNVCPNEATV 118
+ EA+ V +M GY P ++ +L +G + V + ++++ +M++ NE T+
Sbjct: 667 PIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKAKFSDNEVTM 726
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 228/477 (47%), Gaps = 1/477 (0%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
LY A I A ++ + A F++M + C P YN ++ + D+A ++ +M
Sbjct: 73 LYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRM 132
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
G AP+ T+T+ + FC R R+L + ER A ++V G++
Sbjct: 133 LAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHG 192
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
+ A L + R+ N +L+ L E+ A+L K+ RG T +
Sbjct: 193 YNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIW 252
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ L L E +++ + V P TY LM L K + E +YL +
Sbjct: 253 IRGLCEDGRLEEAVALVER-MGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGC 311
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+ + +YN +ID +CK M+ ATE+ ++ + P+ VT+ +LI+G C + ++ + E
Sbjct: 312 IPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALE 371
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
L KPD +NS++ LCR AL ++EMVE G P+ TYNI+I LC
Sbjct: 372 LFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLC 431
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
+G+++ + + PD++TFN LI +C+ K++ A + M T G+ PD
Sbjct: 432 KMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVI 491
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+Y++++ L K+G+ E +TF M GC P++ T N+++E + + EEA ++
Sbjct: 492 TYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVI 548
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 223/499 (44%), Gaps = 36/499 (7%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F +M PD T+N ++H +C+ G V E+ L+ ++ G + N +T I I G C
Sbjct: 199 FDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCE 258
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
R+ E ++E M V P+ T +L+ G+ + +A + L R M + +
Sbjct: 259 DGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFT 317
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
NT++ + M EA +L+ +G++P+ T+ + L D+ + +
Sbjct: 318 YNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQ 377
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+ +KP Y L++ L + G + + +N + ++ ++ +YN++I+ CK+ +
Sbjct: 378 AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNIS 437
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + + + P++ TFNTLI G+CK ++ +L+ + G PD T+NS++
Sbjct: 438 DAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVL 497
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
+ LC+A + ++ + EM+ G PN ITYNILI + C I + + + +M D +
Sbjct: 498 NGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLV 557
Query: 393 PDIYTFNALIQSFCRMNKIEK-----------------------------------AEKA 417
PD +FN LI FCR ++ AEK
Sbjct: 558 PDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKI 617
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F M++ G +PD ++Y L+ L K+ D A M G P T +L L
Sbjct: 618 FGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAM 677
Query: 478 QGRFEEAHDIVKTSKERGI 496
R EA I+ G+
Sbjct: 678 NHRVSEAVAIIHIMVRMGV 696
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 196/428 (45%), Gaps = 8/428 (1%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P YN ++ L K + + A +M C PD FTYN +I G C+ G++ EA
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEAT 335
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L+K G+ P+ TY LI+G C + + + +++ P+ SLV G+
Sbjct: 336 ELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGL 395
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
R A +++ +E N ++ L S+AA ++ +GYLP+
Sbjct: 396 CRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDV 455
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
TF+ + L L+ +++ G+ P TY ++ L KAG+ E +N
Sbjct: 456 FTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKE----VNE 511
Query: 246 VFKDRLVS----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
F++ ++ N +YN++I+ FCK+N ++ A+ + M + P+ V+FNTLI G C
Sbjct: 512 TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFC 571
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
++ ++ L L E G+ TFN +I + A EM+ G P+
Sbjct: 572 RNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLY 631
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY IL+ LC +V R+ +M + P + TF ++ +++ +A M
Sbjct: 632 TYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIM 691
Query: 422 LTLGLRPD 429
+ +G+ P+
Sbjct: 692 VRMGVVPE 699
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 114/505 (22%), Positives = 229/505 (45%), Gaps = 18/505 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+S + N I L + ++ A ++M PD TYN L+ G+C+ V EA
Sbjct: 241 GMSANKFTCNIWIRGLCEDGRLEEAVALVERMGA-YVAPDVVTYNTLMRGLCKDSKVQEA 299
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + +M G P+ +TY +IDG+C + + E +L+ + P+ T SL++G
Sbjct: 300 AQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLING 359
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D +A EL ++ +V N+L+ L + A ++ +M + G P+
Sbjct: 360 LCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPD 419
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L ++++ +++ I +G P T+ L++ K + + +
Sbjct: 420 IWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVE 479
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
++ + +V +YN V++ CK E EM + PN +T+N LI CK
Sbjct: 480 RMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKIN 539
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + ++V + + G PD +FN++I CR + A ++ E G T+N
Sbjct: 540 QLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFN 599
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
ILI + + ++ + ++F +M + PD+YT+ L+ C+ +++A M++
Sbjct: 600 ILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISK 659
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS------------NLIL 472
G P ++ ++ L + R EA M + G P+ + +++
Sbjct: 660 GFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVVDTILSTDKKEIAAPKILV 719
Query: 473 ETLVQQGR-----FEEAHDIVKTSK 492
E L+++G +E H+ V+ +K
Sbjct: 720 EELMKKGHISYRAYEVLHEGVRDNK 744
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 161/360 (44%), Gaps = 2/360 (0%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G P Y ++I+ L I+ A F + KPD YN L+ G+CR G++
Sbjct: 343 FKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLIL 402
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
AL+++ +M G P+++TY I+I+G C +++ V+ + P+ T +L+
Sbjct: 403 HALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLI 462
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G + L A +L+ R + N++L L A E +M +G
Sbjct: 463 DGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCR 522
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P + T++ + L E G++ + G+ P ++ L+ + G D++G
Sbjct: 523 PNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNG-DLDGAYL 581
Query: 243 LNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L ++ S +++N++I + M A +I EM + P+L T+ L+ G C
Sbjct: 582 LFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLC 641
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K A V + L ++ GF P TF M++ L HR +A+ + MV GV P +
Sbjct: 642 KAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVV 701
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 2/183 (1%)
Query: 321 FKPDKFT--FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
PD + + I RA R A+D M + PP YN ++ +L +
Sbjct: 65 LAPDSLQPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQ 124
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+ +++ +M A ++PD T ++SFC + A + S+ G +Y +++
Sbjct: 125 AHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVR 184
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
L G A+ F M PD T N +L L Q+G E+ ++ +RG+S
Sbjct: 185 GLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSA 244
Query: 499 KSF 501
F
Sbjct: 245 NKF 247
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIG---DVARSLRLFQK-MQADRISPDIYTFNALIQS 404
SE+ +P Y LIR L + G DV +L + + D + P + A IQ+
Sbjct: 28 SELTASTIP----AYRALIRELVSAGRLDDVDAALASARSHLAPDSLQP---LYVASIQA 80
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+ R ++ A AF M P +Y+A++ AL+ + D+A + ++ M G PD
Sbjct: 81 YARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPD 140
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
+ T + L++ GR A ++++ ERG K
Sbjct: 141 ARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAK 175
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 135/502 (26%), Positives = 238/502 (47%), Gaps = 7/502 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +N ++ AL +++ + A L ++MS PD T+ L+ G G + A
Sbjct: 180 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAA 239
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LR+ +M +G +P T +LI+G+C RV + ++ P++ T + V+G
Sbjct: 240 LRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNG 299
Query: 125 VFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ C + H A +++ ++ N ++ L N EA IL +M +RG L
Sbjct: 300 L--CQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCL 357
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ +TF+ + L +G L E + +G+ P T+ +L+ AL K G R
Sbjct: 358 PDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRL 417
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + +YN +ID C + + +A ++ +EM + VT+NT+I G CK
Sbjct: 418 FEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCK 477
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + E+ + G + TFN++ID LC+ R +DA +S+M+ G+ PN IT
Sbjct: 478 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNIT 537
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN ++ C GD+ ++ + Q M A+ D+ T+ LI C+ + + A K M
Sbjct: 538 YNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMR 597
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ-QGRF 481
G+R +Y+ +I++L + +A F M + G PD++T ++ L + G
Sbjct: 598 IKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSI 657
Query: 482 EEAHDIVKTSKERGI--SFKSF 501
EA D + ++G F SF
Sbjct: 658 REAFDFLLEMVDKGFIPEFSSF 679
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 230/499 (46%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
GI T +YN +++ LV+ + + L + +M KPD T+N L+ +CR V
Sbjct: 143 LFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVR 202
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A+ ++++M G AP+ T+T L+ GF + RV M E P + TV L+
Sbjct: 203 TAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLI 262
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G + A + + + ++ NT + L N A ++ M G+
Sbjct: 263 NGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHD 322
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ T++ V CL L E GIL+ ++RG P +T+ L+ AL R E
Sbjct: 323 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDL 382
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
V L +V ++N++I+ CKV A + EM+ P+ VT+NTLI C
Sbjct: 383 ARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCS 442
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ K +LL + G T+N++ID LC+ R E+A + +M G+ N IT
Sbjct: 443 LGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 502
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+N LI LC + + +L +M ++ + P+ T+N+++ +C+ I+KA +M
Sbjct: 503 FNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMT 562
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G D +Y LI L K+GR A + M G N ++++L ++
Sbjct: 563 ANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTR 622
Query: 483 EAHDIVKTSKERGISFKSF 501
+A ++ + E G +F
Sbjct: 623 DAMNLFREMTEVGEPPDAF 641
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 195/444 (43%), Gaps = 36/444 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN ++ L ++ + A M + PD FTYNI+++ +C+ G ++EA
Sbjct: 285 GFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 344
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ QM G P++ T+ LI C+ R+ E + + + + P+ T L++
Sbjct: 345 KGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINA 404
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + DP A L ++ NTL+ L + +A +L++M G P
Sbjct: 405 LCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAG-CPR 463
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S+ TY +++ L K R E + +
Sbjct: 464 STV----------------------------------TYNTIIDGLCKKMRIEEAEEVFD 489
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N ++N +ID CK +D A ++ +M + PN +T+N++++ +CK
Sbjct: 490 QMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQG 549
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ K ++L + GF+ D T+ ++I+ LC+A R + AL L M G+ YN
Sbjct: 550 DIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYN 609
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR-MNKIEKAEKAFFSMLT 423
+I+SL + ++ LF++M PD +T+ + + CR I +A M+
Sbjct: 610 PVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVD 669
Query: 424 LGLRPDNFSYSALIKALIKSGRFD 447
G P+ S+ L + L+ G D
Sbjct: 670 KGFIPEFSSFRMLAEGLLNLGMDD 693
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 141/336 (41%), Gaps = 36/336 (10%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ G+SP +N +I+AL K LA F++M C PD TYN LI +C +G
Sbjct: 386 VTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGK 445
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ +AL L+K+ME G + TY +IDG C R+ E V + M + + N T +
Sbjct: 446 LGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 505
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G L + +A ++ +M G
Sbjct: 506 LIDG-----------------------------------LCKDKRIDDANQLISQMISEG 530
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P + T++ +T D+ + IL T G + TY L+ L KAGR
Sbjct: 531 LQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVAL 590
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L + + + +YN VI + N A + REM + P+ T+ + G
Sbjct: 591 KLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGL 650
Query: 301 CK-DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
C+ + + + L+ +++ GF P+ +F + + L
Sbjct: 651 CRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGL 686
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 135/473 (28%), Positives = 235/473 (49%), Gaps = 7/473 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P T Y ++I ++ +D A+ F +M + C+P+ TY+ LI+G+C G V+EA
Sbjct: 258 GMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEA 317
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + +M G P V+T+T I C+ R+ + +++ MK++ PN T SL+ G
Sbjct: 318 LDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG 377
Query: 125 --VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
V R A L R + + N L+ L N A + MG G L
Sbjct: 378 QRVSRM-----AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCL 432
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P +S+++ + T D + +L +K P TY ++++ +G R
Sbjct: 433 PNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRV 492
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + + + SY +I FCK++ M+ A+ + EM DR + PN VT+ LISG+CK
Sbjct: 493 LELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCK 552
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
D ++ +L + G +P+ T+N +I L + + F A + M+E + P+ +T
Sbjct: 553 DEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVT 612
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y+ +I LC G + +L +F KM P+++T+++LIQ+ + ++E+AE+ F +
Sbjct: 613 YSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELK 672
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
GL PD +Y +I+ + SG+ D A M GC P T +++++ L
Sbjct: 673 KQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL 725
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 128/484 (26%), Positives = 229/484 (47%), Gaps = 3/484 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ +YN+VI+AL K ++ A ++ KPD FTY +I G CR +D A
Sbjct: 223 GLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSA 282
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M+ G PN TY+ LI+G CN+ RV E + M V P TV +
Sbjct: 283 FEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLP---TVHTFTAP 339
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D + + F++ + K T +S ++ A + +M G +P
Sbjct: 340 IVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPN 399
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + L+ ++++ + + K G P S+Y L+ G + L
Sbjct: 400 TVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLT 459
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
++ K R + +YN++I +C D A + M+ P+ ++ LISG CK +
Sbjct: 460 NMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKIS 519
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + +++ G P++ T+ ++I C+ + + A L M G PN TYN
Sbjct: 520 KMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYN 579
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI L + + + L + M ++ISPD+ T++ +I C I A + F M+
Sbjct: 580 VLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKH 639
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G P+ +YS+LI+AL + GR +EA++ F +++ G PD T ++E V G+ + A
Sbjct: 640 GCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRA 699
Query: 485 HDIV 488
D +
Sbjct: 700 FDFL 703
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 230/488 (47%), Gaps = 11/488 (2%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y ++ L K N ++ Q+ + +P+ YN +I+ +C+ G V +A ++ ++
Sbjct: 196 YTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVF 255
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G P+ +TYT +I G+C + + F + M E PN AT +L++G+ +
Sbjct: 256 KSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVN 315
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A + + L + L + +A I M +G P YT
Sbjct: 316 EALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNV----YTY 371
Query: 193 TCLVTGLDLNETC-GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL---NHVFK 248
T L++G ++ G+ + GV P TY LM L + ++E D L N + K
Sbjct: 372 TSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLME---NMEIDSALIVFNMMGK 428
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+ N +SYN +I +C + ++A + M P LVT+N +I G+C +
Sbjct: 429 HGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDV 488
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+L ++ G +PD++++ +I C+ + E A +EM++ G+ PN +TY LI
Sbjct: 489 AIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALIS 548
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
C + + R+ ++M+ P++ T+N LI + N AE+ ML + P
Sbjct: 549 GYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISP 608
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
D +YS +I L +G A + F M ++GC P+ +T + +++ L Q+GR EEA ++
Sbjct: 609 DVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMF 668
Query: 489 KTSKERGI 496
K++G+
Sbjct: 669 SELKKQGL 676
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 198/452 (43%), Gaps = 38/452 (8%)
Query: 46 FTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEI 105
FTY L+ + ++ + + Q+ G PN+ Y +I+ C V + ++
Sbjct: 194 FTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINK 253
Query: 106 MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSM 165
+ + + P+ T S++ G R D AFE+ R E +TL+ L N+
Sbjct: 254 VFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGR 313
Query: 166 ASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLL 225
+EA + +M G LP TF + L + + I K+G KP TY
Sbjct: 314 VNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTY-- 371
Query: 226 LMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
L+S M I F +++ RD
Sbjct: 372 -----------------------TSLISGQRVSRMAIGLFHRMS------------RD-G 395
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
+ PN VT+N L++ ++ E+ + M+ + G P+ ++N +I C E A+
Sbjct: 396 VVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAM 455
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
L+ M++ P +TYNI+I+ C GD ++R+ + M+A+ PD +++ LI F
Sbjct: 456 SMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGF 515
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
C+++K+E A F M+ GL P+ +Y+ALI K + D A + M+++GC P+
Sbjct: 516 CKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNV 575
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T N+++ L +Q F A ++ K E IS
Sbjct: 576 QTYNVLIHGLTKQNNFSGAEELCKVMLEEKIS 607
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/537 (23%), Positives = 230/537 (42%), Gaps = 69/537 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+T YNA+++ L+++ ID A + F M C P+ +YN LI G C IG ++A
Sbjct: 395 GVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKA 454
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK----------------- 107
+ ++ M P + TY I+I G+C++ RVLE+MK
Sbjct: 455 MSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISG 514
Query: 108 ------------------ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMER----- 144
+R +CPNE T +L+ G C D + + R +ER
Sbjct: 515 FCKISKMELASGMFNEMMDRGLCPNEVTYTALISGY--CKD--EKLDCAARMLERMKRSG 570
Query: 145 -EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
P Q N L++ L+ + S A + + M + P+ T+ + L +
Sbjct: 571 CRPNVQTY--NVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPL 628
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
+ + +K G P TY L++AL + GR E + + + K L+ + +Y +I+
Sbjct: 629 ALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIE 688
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK--------------- 308
+DRA + EM + P L T++ LI G + HK
Sbjct: 689 VCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDD 748
Query: 309 ---TRELLVML----LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
++++ +L E F+ + +++++ L R+ R+ +A + MV PN
Sbjct: 749 QIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQD 808
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY + SL V ++ +F+ M R + + LI + C++++ ++A F M
Sbjct: 809 TYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKM 868
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
L+ L D ++ LI L+ +G D + ME N NP S+ ++ +++
Sbjct: 869 LSRALNADEIVWTILINGLLGAGYKDLCMEFLHIMETNRRNPSSHARTILAREALKE 925
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 174/365 (47%), Gaps = 22/365 (6%)
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
RCL P +A E L+ F+ RE ++ ++ A A +L DR +
Sbjct: 113 RCLVPVRALEFLL-FLSREHS----------HKYGPDTFAKVAMRLLESR-DRPAAVGRA 160
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG-RDVEGDRYLNH 245
+C ++ + LD F +RG K TY L+ L K DRY +
Sbjct: 161 RIHMIKSC-SNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRY-HQ 218
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++ L N+ YN VI+ CK + A I ++ + P+ T+ ++I G+C++ +
Sbjct: 219 ILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRD 278
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ E+ + E G +P+ T++++I+ LC + R +ALD +SEM GV P T+
Sbjct: 279 LDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTA 338
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI--QSFCRMNKIEKAEKAFFSMLT 423
I +LC +G + + ++F M+ P++YT+ +LI Q RM A F M
Sbjct: 339 PIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRM-----AIGLFHRMSR 393
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ P+ +Y+AL+ L+++ D A F M ++GC P++ + N ++ G E+
Sbjct: 394 DGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEK 453
Query: 484 AHDIV 488
A ++
Sbjct: 454 AMSML 458
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 112/244 (45%), Gaps = 7/244 (2%)
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+S +S+ D F KV M E RDR A + +I AE+ +
Sbjct: 127 LSREHSHKYGPDTFAKVAMR------LLESRDRPAAVGRARIH-MIKSCSNKAEMTQALN 179
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
L M + G K FT+ +++ L + + +D +++ G+ PN + YN +I +LC
Sbjct: 180 YLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALC 239
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
G+V + + K+ + PD +T+ ++I +CR ++ A + F M G P+
Sbjct: 240 KDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAA 299
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
+YS LI L SGR +EA M ++G P +T + L GR E+A I
Sbjct: 300 TYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDM 359
Query: 492 KERG 495
K++G
Sbjct: 360 KKKG 363
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 75/166 (45%)
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
MI AL+ L + G TY L+ L + + + + ++ +
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ P++ +N++I + C+ + AE + G++PD F+Y+++I ++ D A
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ F M++ GC P++ T + ++ L GR EA D + G+
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGV 329
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 140/534 (26%), Positives = 247/534 (46%), Gaps = 41/534 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y VI+ K D AY + +M PD TYN +I +C+ +D+A
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ M G P+ TY ++ G+C++ + E L+ M+ V P+ T L+
Sbjct: 251 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310
Query: 125 V---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ RC++ K F+ + + + +T TLL + E +L M G
Sbjct: 311 LCKNGRCMEARKIFDSMTKRGLKPEITTY---GTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P+ F + +++ + ++G+ P TY ++ L K+GR +
Sbjct: 368 HPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
Y + + L YN +I C N +RA E+ EM DR I N + FN++I HC
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K+ V ++ +L +++ G KP+ T+N++I+ C A + ++A+ LS MV G+ PNT+
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ------------------ 403
TY+ LI C I + +L LF++M++ +SPDI T+N ++Q
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 404 -----------------SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
C+ + A + F ++ + L+ + +++ +I AL+K GR
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 667
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
DEAK F++ NG P+ +T L+ E ++ QG EE + + ++ G + S
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDS 721
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 237/480 (49%), Gaps = 6/480 (1%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM---EGLGYAPN 79
S+++D+ + ++ C P+ F+YNIL+ G+C EAL L+ M G G P+
Sbjct: 139 SDAMDIVLRRMTELG---CIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPD 195
Query: 80 VYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLI 139
V +YT +I+GF + + M +R + P+ T S++ + + KA E+L
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLN 255
Query: 140 RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL 199
++ + + N++L+ ++ EA L+KM G P+ T+ + L
Sbjct: 256 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG 315
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
E I D+ KRG+KP +TY L++ G VE L+ + ++ + + ++
Sbjct: 316 RCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFS 375
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
++I + +D+A + +MR + + PN VT+ +I CK V +++
Sbjct: 376 ILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 435
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G P +NS+I LC +++E A + + EM++ G+ NTI +N +I S C G V S
Sbjct: 436 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 495
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+LF+ M + P++ T+N LI +C K+++A K M+++GL+P+ +YS LI
Sbjct: 496 EKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLING 555
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
K R ++A F ME +G +PD T N+IL+ L Q R A ++ E G +
Sbjct: 556 YCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 615
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/501 (23%), Positives = 221/501 (44%), Gaps = 45/501 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y+ ++D L K+ A F M+ KP+ TY L+ G G + E
Sbjct: 296 GVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 355
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G P+ Y ++ILI + N +V + V M+++ + PN T +++ G
Sbjct: 356 HGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI-G 414
Query: 125 VF----RCLDPHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+ R D FE +I E L+ +V N+L++ L + A ++ +M DR
Sbjct: 415 ILCKSGRVEDAMLYFEQMID----EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G + F+ + + E+ + + ++ GVKP TY L+ AG+ E
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ L+ + L N +Y+ +I+ +CK++ M+ A + +EM ++P+++T+N ++ G
Sbjct: 531 MKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQG 590
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ +EL V + E G + + T+N ++ LC+ +DAL + +
Sbjct: 591 LFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLE 650
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
T+NI+I +L +G + LF ++ + P+ +T+ + ++
Sbjct: 651 ARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN--------------- 695
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+I G +E Q FLSME NGC DS N I+ L+Q+G
Sbjct: 696 --------------------IIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735
Query: 480 RFEEAHDIVKTSKERGISFKS 500
A + E+ S ++
Sbjct: 736 EITRAGTYLSMIDEKHFSLEA 756
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 158/313 (50%), Gaps = 8/313 (2%)
Query: 193 TCLVTGLDLNE-TCGILDTFIKR----GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
T L+ GL ++ T +D ++R G P +Y +L++ L R E L+ +
Sbjct: 126 TPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMA 185
Query: 248 KDRLVS---NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
DR +V SY VI+ F K D+A EM DR I P++VT+N++I+ CK
Sbjct: 186 DDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQ 245
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ K E+L +++ G PD T+NS++ C + + ++A+ L +M GV P+ +TY+
Sbjct: 246 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYS 305
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+L+ LC G + ++F M + P+I T+ L+Q + + + M+
Sbjct: 306 LLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 365
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ PD++ +S LI A G+ D+A F M Q G NP++ T ++ L + GR E+A
Sbjct: 366 GIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA 425
Query: 485 HDIVKTSKERGIS 497
+ + G+S
Sbjct: 426 MLYFEQMIDEGLS 438
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 94/231 (40%), Gaps = 35/231 (15%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ YN +I+ + +D A M KP+ TY+ LI+G C+I +++
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L K+ME G +P++ TY I++ G +R A
Sbjct: 565 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA-------------------------- 598
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
A EL +R E + N +L+ L N + +A + + +
Sbjct: 599 ---------AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKL 649
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
E+ TF+ + L+ +E + F G+ P + TY L+ E + G
Sbjct: 650 EARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG 700
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 135/480 (28%), Positives = 238/480 (49%), Gaps = 6/480 (1%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM---EGLGYAPN 79
S+++D+ + ++ C P+ F+YNIL+ G+C EAL L+ M G G P+
Sbjct: 139 SDAMDIVLRRMTELG---CIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPD 195
Query: 80 VYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLI 139
V +YT +I+GF + + M +R + P+ T S++ + + KA E+L
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLN 255
Query: 140 RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL 199
++ + + N++L+ ++ EA L+KM G P+ T+ + L
Sbjct: 256 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG 315
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
E I D+ KRG+KP +TY L++ G VE L+ + ++ + + ++
Sbjct: 316 RCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFS 375
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
++I + K +D+A + +MR + + PN VT+ +I CK V +++
Sbjct: 376 ILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 435
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G P +NS+I LC +++E A + + EM++ G+ NTI +N +I S C G V S
Sbjct: 436 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 495
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+LF+ M + P++ T+N LI +C K+++A K M+++GL+P+ +YS LI
Sbjct: 496 EKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLING 555
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
K R ++A F ME +G +PD T N+IL+ L Q R A ++ E G +
Sbjct: 556 YCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 615
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 140/534 (26%), Positives = 247/534 (46%), Gaps = 41/534 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y VI+ K D AY + +M PD TYN +I +C+ +D+A
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ M G P+ TY ++ G+C++ + E L+ M+ V P+ T L+
Sbjct: 251 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310
Query: 125 V---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ RC++ K F+ + + + +T TLL + E +L M G
Sbjct: 311 LCKNGRCMEARKIFDSMTKRGLKPEITTY---GTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P+ F + +++ + ++G+ P TY ++ L K+GR +
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
Y + + L YN +I C N +RA E+ EM DR I N + FN++I HC
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K+ V ++ +L +++ G KP+ T+N++I+ C A + ++A+ LS MV G+ PNT+
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ------------------ 403
TY+ LI C I + +L LF++M++ +SPDI T+N ++Q
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 404 -----------------SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
C+ + A + F ++ + L+ + +++ +I AL+K GR
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 667
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
DEAK F++ NG P+ +T L+ E ++ QG EE + + ++ G + S
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDS 721
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/496 (22%), Positives = 204/496 (41%), Gaps = 70/496 (14%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++ ++ + M + PD + ++ILI + G VD+A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + +M G PN TY +I C + RV + E M + + P SL+HG
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ C +A EL++ ++R + NT+ + +S E I
Sbjct: 451 LCTCNKWERAEELILEMLDR-----GICLNTIFFNSIIDSHCKEGRVI------------ 493
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
E+ + + ++ GVKP TY L+ AG+ E + L+
Sbjct: 494 ------------------ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS 535
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L N +Y+ +I+ +CK++ M+ A + +EM ++P+++T+N ++ G +
Sbjct: 536 GMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTR 595
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+EL V + E G + + T+N ++ LC+ +DAL + + T+N
Sbjct: 596 RTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFN 655
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+I +L +G + LF ++ + P+ +T+ + ++
Sbjct: 656 IMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN-------------------- 695
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+I G +E Q FLSME NGC DS N I+ L+Q+G A
Sbjct: 696 ---------------IIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
Query: 485 HDIVKTSKERGISFKS 500
+ E+ S ++
Sbjct: 741 GTYLSMIDEKHFSLEA 756
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 159/313 (50%), Gaps = 8/313 (2%)
Query: 193 TCLVTGLDLNE-TCGILDTFIKR----GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
T L+ GL ++ T +D ++R G P +Y +L++ L R E L+ +
Sbjct: 126 TPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMA 185
Query: 248 KDRLVS---NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
DR +V SY VI+ F K D+A EM DR I P++VT+N++I+ CK
Sbjct: 186 DDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQ 245
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ K E+L +++ G PD T+NS++ C + + ++A+ L +M GV P+ +TY+
Sbjct: 246 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYS 305
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+L+ LC G + ++F M + P+I T+ L+Q + + + M+
Sbjct: 306 LLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 365
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ PD++ +S LI A K G+ D+A F M Q G NP++ T ++ L + GR E+A
Sbjct: 366 GIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA 425
Query: 485 HDIVKTSKERGIS 497
+ + G+S
Sbjct: 426 MLYFEQMIDEGLS 438
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 94/231 (40%), Gaps = 35/231 (15%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ YN +I+ + +D A M KP+ TY+ LI+G C+I +++
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L K+ME G +P++ TY I++ G +R A
Sbjct: 565 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA-------------------------- 598
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
A EL +R E + N +L+ L N + +A + + +
Sbjct: 599 ---------AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKL 649
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
E+ TF+ + L+ +E + F G+ P + TY L+ E + G
Sbjct: 650 EARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG 700
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 238/497 (47%), Gaps = 3/497 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y +++A+ K++ + A +M C P+ TYN++I+G+CR G VD+A
Sbjct: 172 GCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 231
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ ++ G P+ +YT L+ G C +KR +V + M E+N PNE T L+
Sbjct: 232 RDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRF 291
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R +A ++L + E E T +CN ++ + +A L MG G P+
Sbjct: 292 FCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPD 351
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ + L N+ +L ++ P T+ + L + G + +
Sbjct: 352 TISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIE 411
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + V +YN +++ FC +D A E+ R M + PN +T+ TL++G C
Sbjct: 412 QMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAE 468
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ EL+ +L P+ TFN +++ C+ ++A++ + +M+E G PN ITYN
Sbjct: 469 RLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYN 528
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L + +L L + + +SPD+ TF+++I + +++E+A + F +
Sbjct: 529 TLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDI 588
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+RP Y+ ++ L K D A M NGC P+ T +++E L ++G +EA
Sbjct: 589 GMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEA 648
Query: 485 HDIVKTSKERGISFKSF 501
D++ RG+ K+
Sbjct: 649 QDLLSMLCSRGVVSKNL 665
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 210/454 (46%), Gaps = 41/454 (9%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D F YN L+ G CR G +D A RL+ M AP+ YTYT LI C+ RVA+ +L
Sbjct: 109 DVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLL 165
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
+ M R PN T LL + N
Sbjct: 166 DDMLRRGCQPNVVTY-----------------------------------TVLLEAMCKN 190
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
S +A A+L +M +G P T++ + + +++ +L+ G +P +Y
Sbjct: 191 SGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSY 250
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
L++ L + R + + + + + N +++M+I FC+ M++RA ++ ++M +
Sbjct: 251 TTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTE 310
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
+ A N N +I+ CK V + L + G PD ++ +++ LCRA R+ D
Sbjct: 311 HECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWND 370
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A + L EMV PPN +T+N I LC G + +++ L ++MQ + + T+NAL+
Sbjct: 371 AKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVN 430
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
FC I+ A + F SM +P+ +Y+ L+ L + R D A + M C P
Sbjct: 431 GFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPP 487
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ T N+++ Q+G +EA ++V+ E G +
Sbjct: 488 NVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCT 521
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 176/346 (50%), Gaps = 3/346 (0%)
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
+C L+ L S+AA +LR G + ++ V L+ ++ +
Sbjct: 77 LCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM 136
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
V P TY L+ L GR + L+ + + NV +Y ++++ CK +
Sbjct: 137 ---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGF 193
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
++A + EMR + PN+VT+N +I+G C++ V R+LL L G +PD ++ ++
Sbjct: 194 EQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTL 253
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
+ LC + R++D + +EM+E PN +T+++LIR C G V R++++ Q+M
Sbjct: 254 LKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHEC 313
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
+ + N +I S C+ +++ A K +M + G PD SY+ ++K L ++ R+++AK+
Sbjct: 314 ATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKE 373
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M +N C P+ T N + L Q+G E+A +++ +E G +
Sbjct: 374 LLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCT 419
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 3/169 (1%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G PD + +I LCR R DA L G P + YN L+ C G + +
Sbjct: 70 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 129
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
RL M ++PD YT+ LI+ C ++ A ML G +P+ +Y+ L++A
Sbjct: 130 RRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 186
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+ K+ F++A M GC P+ T N+I+ + ++GR ++A D++
Sbjct: 187 MCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLL 235
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G P+ LIR+LC G + + R+ + + D++ +N L+ +CR ++ A
Sbjct: 70 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 129
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
+ SM + PD ++Y+ LI+ L GR +A M + GC P+ T ++LE
Sbjct: 130 RRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 186
Query: 475 LVQQGRFEEAHDIVKTSKERGIS 497
+ + FE+A ++ + +G +
Sbjct: 187 MCKNSGFEQAMAVLDEMRAKGCT 209
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQ-KMQADRISPDIYTFNALIQSFCRMNKIEKA 414
V PN + + R L A D+A + RL + D +PD+Y LI++ CR + A
Sbjct: 37 VAPNPASARL--RRLIAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDA 94
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
+ + G D F+Y+ L+ + G D A++ SM PD+YT ++
Sbjct: 95 ARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRV 151
Query: 475 LVQQGRFEEAHDIVKTSKERG 495
L +GR +A ++ RG
Sbjct: 152 LCDRGRVADALSLLDDMLRRG 172
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 249/492 (50%), Gaps = 8/492 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ A+ K DL ++M + +TYNILI+ CR + AL L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P++ T + L++G+C+ KR+++ +++ M E P+ T +L+HG+F
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 128 CLDPHKAFELLIRFMER--EP--LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+A L+ R ++R +P +T +V N L R A +L KM
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR----GDIDLAFNLLNKMEAAKIEA 183
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ F+ + L +++ + +G++P TY L+ L GR + + L
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + ++ N+ ++N +ID F K A ++ +M R I P++ T+N+LI+G C
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ K +++ ++ PD T+N++I C++ R ED + EM G+ +T+TY
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI+ L GD + ++F++M +D + PDI T++ L+ C K+EKA + F M
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
++ D + Y+ +I+ + K+G+ D+ F S+ G P+ T N ++ L + +E
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 483
Query: 484 AHDIVKTSKERG 495
A+ ++K KE G
Sbjct: 484 AYALLKKMKEDG 495
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 241/486 (49%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGIS + YN +I+ + + I LA +M +P T + L++G C + +
Sbjct: 39 LGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 98
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ LV QM +GY P+ T+T LI G + +E +++ M +R PN T +V+
Sbjct: 99 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 158
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + D AF LL + + ++ NT++ L +A + ++M +G P
Sbjct: 159 GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 218
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ ++CL + ++ +L I++ + P T+ L++A K G+ VE ++
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K + ++ +YN +I+ FC + +D+A ++ M +D P+L T+NTLI G CK
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V EL + G D T+ ++I L ++A +MV GVPP+ +TY
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 398
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+IL+ LC G + ++L +F MQ I DIY + +I+ C+ K++ F S+
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 458
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G++P+ +Y+ +I L EA M+++G PDS T N ++ ++ G
Sbjct: 459 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 518
Query: 484 AHDIVK 489
+ ++++
Sbjct: 519 SAELIR 524
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 176/368 (47%), Gaps = 4/368 (1%)
Query: 133 KAFELLIRF---MEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
K F+L+I M+R ++ L N L+ S S A A+L KM GY P T
Sbjct: 24 KKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTL 83
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ G +++ ++D ++ G +P T+ L+ L+ + E ++ + +
Sbjct: 84 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 143
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
N+ +Y +V++ CK +D A + +M I ++V FNT+I CK V
Sbjct: 144 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 203
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
L + G +P+ T++S+I CLC R+ DA LS+M+E + PN +T+N LI
Sbjct: 204 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 263
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
+ G + +L M I PDI+T+N+LI FC ++++KA++ F M++ P
Sbjct: 264 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 323
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
D +Y+ LIK KS R ++ + F M G D+ T +++ L G + A +
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 489 KTSKERGI 496
K G+
Sbjct: 384 KQMVSDGV 391
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 192/419 (45%), Gaps = 4/419 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y V++ L K IDLA+ +M + + D +N +I +C+ VD+A
Sbjct: 145 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 204
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L K+ME G PNV TY+ LI C+ R ++ ++L M E+ + PN T +L+
Sbjct: 205 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 264
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +L ++R N+L+ + +A + M + P+
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + + + RG+ TY L++ L+ G +
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D + ++ +Y++++D C +++A E+ M+ +I ++ + T+I G CK
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 444
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V +L L G KP+ T+N+MI LC ++A L +M E G P++ TYN
Sbjct: 445 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYN 504
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LIR+ GD A S L ++M++ R D T I M + +K+F ML+
Sbjct: 505 TLIRAHLRDGDKAASAELIREMRSCRFVGDAST----IGLVANMLHDGRLDKSFLDMLS 559
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 39/283 (13%)
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K R + ++ +N ++ K+ D + +M+ I+ NL T+N LI+ C+ +++
Sbjct: 3 KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 62
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI------ 361
LL +++ G++P T +S+++ C R DA+ + +MVE G P+TI
Sbjct: 63 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 122
Query: 362 -----------------------------TYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
TY +++ LC GD+ + L KM+A +I
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 182
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
D+ FN +I S C+ ++ A F M T G+RP+ +YS+LI L GR+ +A Q
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH----DIVKTS 491
M + NP+ T N +++ V++G+F EA D++K S
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ T Y +I L D A F+QM D PD TY+IL+ G+C G
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++AL + M+ ++Y YT +I+G C A +V + + + + + V PN T +
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ +A+ LL + E PL NTL+ + + +A ++R+M
Sbjct: 471 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 530
Query: 181 YLPESSTFDYTVTCLVTG 198
++ ++ST L G
Sbjct: 531 FVGDASTIGLVANMLHDG 548
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 236/493 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+S S N ++ LV++ +DLA+ + ++ + + +T NI+++ +C+ +
Sbjct: 217 GVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENV 276
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + MEG G ++ TY LI+ +C V E F++L R + P T ++++G
Sbjct: 277 MFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYG 336
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A ++LI ++ NTLL + EA I +M RG LP+
Sbjct: 337 LCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPD 396
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+F + L L + + G+ P Y +L++ + G + + +
Sbjct: 397 LVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRD 456
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +V +YN ++ CK M A + EM +R + P+ TF TLI G+CKD
Sbjct: 457 EMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDG 516
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ K L ++ KPDK T+N++ID C+A A + +M+ + P+ I+Y
Sbjct: 517 NMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYG 576
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++ C+ G + +L L +M I P++ T N LI+ +CR + KA + M++
Sbjct: 577 TVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISN 636
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ PD+FSY+ LI +K ++A ME+ G + T NLIL +G+ +EA
Sbjct: 637 GIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEA 696
Query: 485 HDIVKTSKERGIS 497
+++ E GI+
Sbjct: 697 EQVLRKMIEIGIN 709
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 219/461 (47%), Gaps = 2/461 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ YN +I+A + ++ A+ S +P TYN +++G+C+IG D A
Sbjct: 287 GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRA 346
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +M LG PN TY L+ C + E + + M R V P+ + SL+
Sbjct: 347 KDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGV 406
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMGDRGYLP 183
+ R ++A + R MER + V T+L N S+A + +M RG
Sbjct: 407 LARNGHLYQAL-MHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM 465
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + L + + + ++RG+ P F T+ L+ K G +
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + L + +YN +ID FCK M RA E+ +M +DI P+ +++ T+++G C
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + L +LE G +P+ T N++I CR+ A + LS+M+ G+ P++ +Y
Sbjct: 586 GLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSY 645
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI ++ ++ L +M+ + +I T+N ++ FC K+++AE+ M+
Sbjct: 646 NTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIE 705
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+G+ PD +YS+LI + EA + M Q G PD
Sbjct: 706 IGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 212/450 (47%)
Query: 49 NILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
N L+ G+ R G VD A + ++ G NVYT I+++ C ++ V L M+
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE 168
+ V + T +L++ R +AF+LL F R L N +LY L
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDR 345
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A +L +M G P ++T++ + + ++ E I D +RGV P ++ L+
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIG 405
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
L + G + + + + +V + Y ++ID FC+ + A ++ EM R
Sbjct: 406 VLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM 465
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
++VT+NT ++G CK L ++E G PD +TF ++I C+ + AL+
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
MV + P+ +TYN LI C G++ R+ L+ M I PD ++ ++ FC
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+ +A ML G+RP+ + + LIK +SG +A + M NG PDS++
Sbjct: 586 GLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSY 645
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGISF 498
N +++ +++ E+A ++ ++RG+ F
Sbjct: 646 NTLIDGYLKEANLEKAFILINEMEKRGLQF 675
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 206/427 (48%), Gaps = 35/427 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG++P+ YN ++ + + ++I A F +MS PD +++ LI + R G + +
Sbjct: 356 LGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQ 415
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL ++ME G P+ YTILIDGFC +++ ++ + M R
Sbjct: 416 ALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGC------------ 463
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
FM+ + NT L L M ++A + +M +RG +P
Sbjct: 464 -----------------FMD------VVTYNTFLNGLCKKKMFADADMLFNEMVERGMVP 500
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF + ++++ + + ++ +KP TY L++ KAG
Sbjct: 501 DFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELW 560
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + ++ + SY V++ FC ++ A +C +M ++ I PNLVT NTLI G+C+
Sbjct: 561 DDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRS 620
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ K E L ++ G PD F++N++ID + E A ++EM + G+ N ITY
Sbjct: 621 GDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITY 680
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+++ CA G + + ++ +KM I+PD T+++LI + +++A + ML
Sbjct: 681 NLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQ 740
Query: 424 LGLRPDN 430
GL PD+
Sbjct: 741 RGLVPDD 747
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 130/273 (47%)
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y LL+ +A + EG + + + ++N+ N ++ + +D A EI E+
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
I N+ T N +++ CKD + L + G D T+N++I+ CR E
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+A L+ G+ P +TYN ++ LC IG R+ + +M ++P+ T+N L+
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
CR + I +A++ F M G+ PD S+S+LI L ++G +A F ME++G
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
PD+ ++++ + G +A + RG
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARG 462
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 5/219 (2%)
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
+ ++ L+ + + ++ + E +L G N ++ L R + A + E
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
+V G+ N T NI++ +LC + M+ + DI T+N LI ++CR
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+E+A + S + G+ P +Y+A++ L K G++D AK + M Q G P++ T N
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367
Query: 471 ILETLVQQGRFEEAHDIVKTSKERG-----ISFKSFPGL 504
+L + ++ EA +I RG +SF S G+
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGV 406
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 21/201 (10%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV-EWGVPPNTIT----------------Y 363
FK + ++M+ L R R +A C+ MV + GV + Y
Sbjct: 131 FKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIY 190
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
++L+R+ + FQ ++ +S I N L+ R ++ A + + ++
Sbjct: 191 DLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVR 250
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ + ++ + ++ AL K +F+ ME G D T N ++ ++G EE
Sbjct: 251 GGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEE 310
Query: 484 AHDIVKTSKERGISFKSFPGL 504
A ++ + RG+ PGL
Sbjct: 311 AFQLLNSFSSRGME----PGL 327
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 235/465 (50%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F++M C+P +YN +++ + G +A ++ +M+ +G P+VYT+TI + FC
Sbjct: 99 FERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCI 158
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
R R+L M + N + +++ G ++ +A+ L +++ L
Sbjct: 159 TGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILT 218
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
N L++ L E+ + K+ RG P TF+ + L ++E +L++ +
Sbjct: 219 FNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIV 278
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
G+ P +Y L+ K + VE + YL+ + + N +YN +I+ FCK MM
Sbjct: 279 SEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQ 338
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A +I R+ + P+ T+++LI+G C D ++++ + +E GFK +N+++
Sbjct: 339 NADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
L + AL + +M+E G P+ TYN+++ LC +G ++ + + A
Sbjct: 399 KGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCI 458
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PDI+TFN LI +C+ ++KA + +ML+ G+ PD +Y+ L+ L K+ + D T
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDT 518
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
F +M + GC P+ T N+++E+ + + EA ++ K K RG++
Sbjct: 519 FKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/528 (26%), Positives = 230/528 (43%), Gaps = 71/528 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +N +I L K ++ + F ++ P+ FT+NI I G+CR G +DEA
Sbjct: 211 GICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEA 270
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL++ + G P+V +Y LI GFC ++ E L M V PNE T ++++G
Sbjct: 271 ARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIING 330
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ M A ILR +G++P+
Sbjct: 331 FCKA-----------------------------------GMMQNADKILRDAMFKGFIPD 355
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L D+N + +++G K Y L++ L K G ++ + +
Sbjct: 356 EFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMK 415
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++ +YN+V++ CK+ + A I + + P++ TFNTLI G+CK
Sbjct: 416 DMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQR 475
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ K E+L +L G PD T+N++++ LC+A + ++ +D M+E G PN ITYN
Sbjct: 476 NMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYN 535
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYT--------------------------- 397
ILI S C V+ ++ LF++M+ ++PDI T
Sbjct: 536 ILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKE 595
Query: 398 ---------FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
FN +I +FC + AEK F M PDN++Y +I + K+G D
Sbjct: 596 YKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDL 655
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
A L G P T +L L R EA I+ + GI
Sbjct: 656 AHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGI 703
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/501 (24%), Positives = 231/501 (46%), Gaps = 1/501 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F PS + YNA+++ LV+ A+ + +M PD +T+ I + C G
Sbjct: 102 MDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGR 161
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
ALRL+ M G G N +Y +I GF E + + + M ++ +CP+ T
Sbjct: 162 PTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNK 221
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+H + + + ++ +L + M+R N + L EAA +L + G
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ +++ + L E L + GV+P TY ++ KAG D
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNAD 341
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L + + +Y+ +I+ C M+RA + E ++ +++ +NTL+ G
Sbjct: 342 KILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGL 401
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K V + +L+ ++E G PD +T+N +++ LC+ DA L++ + G P+
Sbjct: 402 SKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDI 461
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
T+N LI C ++ +++ + M + I+PD+ T+N L+ C+ K++ F +
Sbjct: 462 FTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKA 521
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
ML G P+ +Y+ LI++ K + EA + F M+ G PD T ++ L G
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581
Query: 481 FEEAHDI-VKTSKERGISFKS 500
++A+++ V KE S+ +
Sbjct: 582 LDKAYELFVTIEKEYKFSYST 602
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 157/357 (43%), Gaps = 34/357 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S LYN ++ L K + A + M C PD +TYN++++G+C++G + +A
Sbjct: 386 GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ G P+++T+ LIDG+C + + + +L+ M + P+ T +L++G
Sbjct: 446 NGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNG 505
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + +E+ + N L+ + SEA + ++M RG P+
Sbjct: 506 LCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T + L + +L++ + T I++ K +ST +
Sbjct: 566 IVTLCTLICGLCSNGELDKAYELFVT-IEKEYKFSYSTAI-------------------- 604
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+N++I+ FC+ + A ++ +M D AP+ T+ +I +CK
Sbjct: 605 -------------FNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTG 651
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ L+ + G P T +++CLC HR +A+ ++ MV+ G+ P +
Sbjct: 652 NIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV 708
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 125/288 (43%), Gaps = 13/288 (4%)
Query: 215 GVKPRFSTYLLLMEAL-----YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
G K TY ++E L ++A DV + N +++ V Y ++ + +
Sbjct: 35 GFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKN--VDSKMLEGV--YIGIMRDYGRKG 90
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+ A + M D P++ ++N +++ + + ++ + + + G PD +T
Sbjct: 91 KVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHT 150
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+ C R AL L+ M G N ++Y +I + LF +M
Sbjct: 151 IRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQ 210
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
I PDI TFN LI C+ ++++EK F ++ G+ P+ F+++ I+ L + G DEA
Sbjct: 211 GICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEA 270
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA----HDIVKTSKE 493
+ S+ G PD + N ++ + + EA H +V + E
Sbjct: 271 ARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE 318
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 36/215 (16%)
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE------------------------ 353
E GFK T+ MI+ L +FE D L+EM +
Sbjct: 33 EDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKV 92
Query: 354 ------------WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+ P+ +YN ++ L G +++ +++ +M+ I PD+YT
Sbjct: 93 QEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIR 152
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
++SFC + A + +M G + SY A+I K EA F M + G
Sbjct: 153 MKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGI 212
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
PD T N ++ L ++G +E+ + +RG+
Sbjct: 213 CPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGV 247
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 236/493 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+S S N ++ LV++ +DLA+ + ++ + + +T NI+++ +C+ +
Sbjct: 217 GVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENV 276
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + MEG G ++ TY LI+ +C V E F++L R + P T ++++G
Sbjct: 277 MFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYG 336
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A ++LI ++ NTLL + EA I +M RG LP+
Sbjct: 337 LCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPD 396
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+F + L L + + G+ P Y +L++ + G + + +
Sbjct: 397 LVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRD 456
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +V +YN ++ CK M A + EM +R + P+ TF TLI G+CKD
Sbjct: 457 EMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDG 516
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ K L ++ KPDK T+N++ID C+A A + +M+ + P+ I+Y
Sbjct: 517 NMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYG 576
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++ C+ G + +L L +M I P++ T N LI+ +CR + KA + M++
Sbjct: 577 TVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISN 636
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ PD+FSY+ LI +K ++A ME+ G + T NLIL +G+ +EA
Sbjct: 637 GIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEA 696
Query: 485 HDIVKTSKERGIS 497
+++ E GI+
Sbjct: 697 EQVLRKMIEIGIN 709
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 219/461 (47%), Gaps = 2/461 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ YN +I+A + ++ A+ S +P TYN +++G+C+IG D A
Sbjct: 287 GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRA 346
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +M LG PN TY L+ C + E + + M R V P+ + SL+
Sbjct: 347 KDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGV 406
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMGDRGYLP 183
+ R ++A + R MER + V T+L N S+A + +M RG
Sbjct: 407 LARNGHLYQAL-MHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM 465
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + L + + + ++RG+ P F T+ L+ K G +
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + L + +YN +ID FCK M RA E+ +M +DI P+ +++ T+++G C
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + L +LE G +P+ T N++I CR+ A + LS+M+ G+ P++ +Y
Sbjct: 586 GLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSY 645
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI ++ ++ L +M+ + +I T+N ++ FC K+++AE+ M+
Sbjct: 646 NTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIE 705
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+G+ PD +YS+LI + EA + M Q G PD
Sbjct: 706 IGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 212/450 (47%)
Query: 49 NILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
N L+ G+ R G VD A + ++ G NVYT I+++ C ++ V L M+
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE 168
+ V + T +L++ R +AF+LL F R L N +LY L
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDR 345
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A +L +M G P ++T++ + + ++ E I D +RGV P ++ L+
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIG 405
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
L + G + + + + +V + Y ++ID FC+ + A ++ EM R
Sbjct: 406 VLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM 465
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
++VT+NT ++G CK L ++E G PD +TF ++I C+ + AL+
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
MV + P+ +TYN LI C G++ R+ L+ M I PD ++ ++ FC
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+ +A ML G+RP+ + + LIK +SG +A + M NG PDS++
Sbjct: 586 GLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSY 645
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGISF 498
N +++ +++ E+A ++ ++RG+ F
Sbjct: 646 NTLIDGYLKEANLEKAFILINEMEKRGLQF 675
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 206/427 (48%), Gaps = 35/427 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG++P+ YN ++ + + ++I A F +MS PD +++ LI + R G + +
Sbjct: 356 LGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQ 415
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL ++ME G P+ YTILIDGFC +++ ++ + M R
Sbjct: 416 ALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGC------------ 463
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
FM+ + NT L L M ++A + +M +RG +P
Sbjct: 464 -----------------FMD------VVTYNTFLNGLCKKKMFADADMLFNEMVERGMVP 500
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF + ++++ + + ++ +KP TY L++ KAG
Sbjct: 501 DFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELW 560
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + ++ + SY V++ FC ++ A +C +M ++ I PNLVT NTLI G+C+
Sbjct: 561 DDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRS 620
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ K E L ++ G PD F++N++ID + E A ++EM + G+ N ITY
Sbjct: 621 GDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITY 680
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+++ CA G + + ++ +KM I+PD T+++LI + +++A + ML
Sbjct: 681 NLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQ 740
Query: 424 LGLRPDN 430
GL PD+
Sbjct: 741 RGLVPDD 747
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 130/273 (47%)
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y LL+ +A + EG + + + ++N+ N ++ + +D A EI E+
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
I N+ T N +++ CKD + L + G D T+N++I+ CR E
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+A L+ G+ P +TYN ++ LC IG R+ + +M ++P+ T+N L+
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
CR + I +A++ F M G+ PD S+S+LI L ++G +A F ME++G
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
PD+ ++++ + G +A + RG
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARG 462
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 5/219 (2%)
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
+ ++ L+ + + ++ + E +L G N ++ L R + A + E
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
+V G+ N T NI++ +LC + M+ + DI T+N LI ++CR
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+E+A + S + G+ P +Y+A++ L K G++D AK + M Q G P++ T N
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367
Query: 471 ILETLVQQGRFEEAHDIVKTSKERG-----ISFKSFPGL 504
+L + ++ EA +I RG +SF S G+
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGV 406
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 21/201 (10%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV-EWGVPPNTIT----------------Y 363
FK + ++M+ L R R +A C+ MV + GV + Y
Sbjct: 131 FKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIY 190
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
++L+R+ + FQ ++ +S I N L+ R ++ A + + ++
Sbjct: 191 DLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVR 250
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ + ++ + ++ AL K +F+ ME G D T N ++ ++G EE
Sbjct: 251 GGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEE 310
Query: 484 AHDIVKTSKERGISFKSFPGL 504
A ++ + RG+ PGL
Sbjct: 311 AFQLLNSFSSRGME----PGL 327
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/531 (26%), Positives = 244/531 (45%), Gaps = 41/531 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P Y+ VI+ K +D Y + +M + P+ TYN +I +C+ VD+A+ +
Sbjct: 86 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEV 145
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV-- 125
+ M G P+ TY ++ GFC++ + E L+ M+ V P+ T SL+ +
Sbjct: 146 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 205
Query: 126 -FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
RC + K F+ + + + +T TLL + E +L M G P
Sbjct: 206 NGRCTEARKIFDSMTKRGLKPEITTY---GTLLQGYATKGALVEMHGLLDLMVRNGIHPN 262
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F V + E + ++G+ P TY ++ L K+GR + Y
Sbjct: 263 HYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 322
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L YN +I C N +RA E+ EM DR I N + FN++I HCK+
Sbjct: 323 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 382
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V ++ +L +++ G KPD T++++ID C A + ++A L+ MV G+ P+ +TY+
Sbjct: 383 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYS 442
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ--------------------- 403
LI C I + +L LF++M++ +SPDI T+N ++Q
Sbjct: 443 TLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKS 502
Query: 404 --------------SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
C+ + A + F ++ + L+ + +++ +I AL+K GR DEA
Sbjct: 503 GRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 562
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
K F++ NG P+ +T L+ E ++ QG EE + + ++ G + S
Sbjct: 563 KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDS 613
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/447 (28%), Positives = 226/447 (50%), Gaps = 2/447 (0%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQM--EGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
PD F+YNIL++G+C EAL L+ M +G P+V +Y+ +I+GF + + +
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTY 108
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
M ++ + PN T S++ + + KA E+L ++ + + N++++
Sbjct: 109 STYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 168
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
++ EA L+KM G P+ T++ + L E I D+ KRG+KP
Sbjct: 169 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEI 228
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
+TY L++ G VE L+ + ++ + N +++++ + K ++ A + +
Sbjct: 229 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 288
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
MR + + PN VT+ +I CK V +++ G P +NS+I LC ++
Sbjct: 289 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 348
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
+E A + + EM++ G+ NTI +N +I S C G V S +LF M + PDI T++
Sbjct: 349 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 408
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI +C K+++A K SM+++G++PD +YS LI K R +A F ME +G
Sbjct: 409 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSG 468
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDI 487
+PD T N+IL+ L Q R A ++
Sbjct: 469 VSPDIITYNIILQGLFQTRRTAAAKEL 495
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 227/501 (45%), Gaps = 45/501 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN+++D L K+ A F M+ KP+ TY L+ G G + E
Sbjct: 188 GVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 247
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G PN Y ++IL+ + ++V E V M+++ + PN T +++ G
Sbjct: 248 HGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVI-G 306
Query: 125 VF----RCLDPHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+ R D FE +I E L+ +V N+L++ L + A ++ +M DR
Sbjct: 307 ILCKSGRVEDAMLYFEQMID----EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 362
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G + F+ + + E+ + D ++ GVKP TY L++ AG+ E
Sbjct: 363 GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 422
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ L + + + +Y+ +I+ +CK++ M A + REM ++P+++T+N ++ G
Sbjct: 423 TKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQG 482
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ +EL V + + G + + T+N ++ LC+ +DAL
Sbjct: 483 LFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDAL-------------- 528
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
R+FQ + + + TFN +I + ++ + ++A+ F
Sbjct: 529 ---------------------RMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV 567
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+ + GL P+ ++Y + + +I G +E Q FLSME NGC DS N I+ L+Q+G
Sbjct: 568 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 627
Query: 480 RFEEAHDIVKTSKERGISFKS 500
A + E+ S ++
Sbjct: 628 EITRAGTYLSMIDEKHFSLEA 648
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 150/294 (51%), Gaps = 5/294 (1%)
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR---LVSNVNSYNMVID 263
+ D ++RG+ FS Y +L+ L R E L H+ D +V SY+ VI+
Sbjct: 39 VFDELLRRGIPDVFS-YNILLNGLCDENRSQEALELL-HIMADDGGDCPPDVVSYSTVIN 96
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
F K +D+ EM D+ I+PN+VT+N++I+ CK V K E+L +++ G P
Sbjct: 97 GFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMP 156
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D T+NS++ C + + ++A+ L +M GV P+ +TYN L+ LC G + ++F
Sbjct: 157 DCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIF 216
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
M + P+I T+ L+Q + + + M+ G+ P+++ +S L+ A K
Sbjct: 217 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQ 276
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ +EA F M Q G NP++ T ++ L + GR E+A + + G+S
Sbjct: 277 EKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 330
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 91/231 (39%), Gaps = 35/231 (15%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P Y+ +ID + +D A M KPD TY+ LI+G C+I + +
Sbjct: 397 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKD 456
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L ++ME G +P++ TY I++ G +R A
Sbjct: 457 ALVLFREMESSGVSPDIITYNIILQGLFQTRRTA-------------------------- 490
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
A EL + + + N +L+ L N + +A + + +
Sbjct: 491 ---------AAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKL 541
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
E+ TF+ + L+ +E + F G+ P + TY L+ E + G
Sbjct: 542 EARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG 592
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 99/250 (39%), Gaps = 11/250 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P Y+ +I+ K + + A + F++M PD TYNI++ G+ +
Sbjct: 432 VGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 491
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L + G + TY I++ G C K + R+ + + ++ T ++
Sbjct: 492 AKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMID 551
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS-----NNSMASEAAAILRKMGD 178
+ + +A +L + F + LV N YRL + E + M D
Sbjct: 552 ALLKVGRNDEAKDLFVAFS-----SNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 606
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G +S ++ V L+ ++ L ++ ST L ++ L G+ E
Sbjct: 607 NGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLSGGKYQE 665
Query: 239 GDRYLNHVFK 248
R+L +K
Sbjct: 666 YHRFLPEKYK 675
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/530 (25%), Positives = 256/530 (48%), Gaps = 39/530 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ +N + A+ ++ DL + M ++ + D +T I+I+ CR + A +
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ + LGY P+ T++ L++GFC RV+E +++ M E P+ TV +L++G+
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGL-- 185
Query: 128 CLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
CL +A L+ R +E ++ +L RL + ++ A + RKM +R
Sbjct: 186 CLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASV 245
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+ + L ++ + + +G+K TY L+ L G+ +G + L
Sbjct: 246 VQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLRE 305
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++ +V +++ +ID F K + A E+ EM R IAP+ +T+N+LI G CK+
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL-------------------- 345
+H+ ++ +++ G +PD T++ +I+ C+A R +D +
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 346 ---------------DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+ EMV GVPP+ +TY IL+ LC G++ ++L +F+KMQ R
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
++ I +N +I C +K++ A F S+ G++PD +Y+ +I L K G EA
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
F M+++GC PD +T N+++ + + ++++ K G S S
Sbjct: 546 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADS 595
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 211/452 (46%), Gaps = 39/452 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y V++ L KS + LA F++M K Y+I+I +C+ G D+A
Sbjct: 205 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 264
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +ME G +V TY+ LI G CN + + ++L M RN+ P+ T +L+
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALID- 323
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
VF K +LL EA + +M RG P+
Sbjct: 324 VFV-----KEGKLL-----------------------------EAKELYNEMITRGIAPD 349
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + L+E + D + +G +P TY +L+ + KA R +G R
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L+ N +YN ++ FC+ ++ A E+ +EM R + P++VT+ L+ G C +
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E++K E+ + + +N +I +C A + +DA + + GV P+ +TYN
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++I LC G ++ + LF+KM+ D +PD +T+N LI++ + + + + M
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 589
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
G D+ + +I ++ R D ++FL M
Sbjct: 590 GFSADSSTIKMVID-MLSDRRLD---KSFLDM 617
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 112/282 (39%), Gaps = 43/282 (15%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P T YN++ID K N + A F M C+PD TY+ILI+ C+ VD+
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 65 LRLVKQMEGLGYAPN-----------------------------------VYTYTILIDG 89
+RL +++ G PN V TY IL+DG
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C+ + + + E M++ + ++HG+ A+ L ++
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ N ++ L SEA + RKM + G P+ T++ + + G L + +++
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIE 584
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
G ST ++++ L DR L+ F D L
Sbjct: 585 EMKVCGFSADSSTIKMVIDML--------SDRRLDKSFLDML 618
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 4/197 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS G+ P+T YN ++ +S ++ A FQ+M P TY IL+ G+C G
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++AL + ++M+ + Y I+I G CNA +V + + + + ++ V P+ T
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR--LSNNSMASEAAAILRKMGD 178
++ G+ + +A ++L R M+ + T +L R L + + S + ++ +M
Sbjct: 531 MIGGLCKKGSLSEA-DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS-SVELIEEMKV 588
Query: 179 RGYLPESSTFDYTVTCL 195
G+ +SST + L
Sbjct: 589 CGFSADSSTIKMVIDML 605
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 64/156 (41%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ DA+D M++ P I +N L ++ L + M+ + I D+YT
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
+I +CR K+ A LG PD ++S L+ GR EA M +
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
PD T + ++ L +GR EA ++ E G
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 205
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/530 (25%), Positives = 256/530 (48%), Gaps = 39/530 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ +N + A+ ++ DL + M ++ + D +T I+I+ CR + A +
Sbjct: 97 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 156
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ + LGY P+ T++ L++GFC RV+E +++ M E P+ TV +L++G+
Sbjct: 157 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGL-- 214
Query: 128 CLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
CL +A L+ R +E ++ +L RL + ++ A + RKM +R
Sbjct: 215 CLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASV 274
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+ + L ++ + + +G+K TY L+ L G+ +G + L
Sbjct: 275 VQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLRE 334
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++ +V +++ +ID F K + A E+ EM R IAP+ +T+N+LI G CK+
Sbjct: 335 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 394
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL-------------------- 345
+H+ ++ +++ G +PD T++ +I+ C+A R +D +
Sbjct: 395 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 454
Query: 346 ---------------DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+ EMV GVPP+ +TY IL+ LC G++ ++L +F+KMQ R
Sbjct: 455 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 514
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
++ I +N +I C +K++ A F S+ G++PD +Y+ +I L K G EA
Sbjct: 515 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 574
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
F M+++GC PD +T N+++ + + ++++ K G S S
Sbjct: 575 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADS 624
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 211/452 (46%), Gaps = 39/452 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y V++ L KS + LA F++M K Y+I+I +C+ G D+A
Sbjct: 234 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 293
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +ME G +V TY+ LI G CN + + ++L M RN+ P+ T +L+
Sbjct: 294 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALID- 352
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
VF K +LL EA + +M RG P+
Sbjct: 353 VFV-----KEGKLL-----------------------------EAKELYNEMITRGIAPD 378
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + L+E + D + +G +P TY +L+ + KA R +G R
Sbjct: 379 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 438
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L+ N +YN ++ FC+ ++ A E+ +EM R + P++VT+ L+ G C +
Sbjct: 439 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 498
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E++K E+ + + +N +I +C A + +DA + + GV P+ +TYN
Sbjct: 499 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 558
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++I LC G ++ + LF+KM+ D +PD +T+N LI++ + + + + M
Sbjct: 559 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 618
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
G D+ + +I ++ R D ++FL M
Sbjct: 619 GFSADSSTIKMVID-MLSDRRLD---KSFLDM 646
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 112/282 (39%), Gaps = 43/282 (15%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P T YN++ID K N + A F M C+PD TY+ILI+ C+ VD+
Sbjct: 374 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 433
Query: 65 LRLVKQMEGLGYAPN-----------------------------------VYTYTILIDG 89
+RL +++ G PN V TY IL+DG
Sbjct: 434 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 493
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C+ + + + E M++ + ++HG+ A+ L ++
Sbjct: 494 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 553
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ N ++ L SEA + RKM + G P+ T++ + + G L + +++
Sbjct: 554 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIE 613
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
G ST ++++ L DR L+ F D L
Sbjct: 614 EMKVCGFSADSSTIKMVIDML--------SDRRLDKSFLDML 647
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 4/197 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS G+ P+T YN ++ +S ++ A FQ+M P TY IL+ G+C G
Sbjct: 440 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 499
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++AL + ++M+ + Y I+I G CNA +V + + + + ++ V P+ T
Sbjct: 500 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 559
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR--LSNNSMASEAAAILRKMGD 178
++ G+ + +A ++L R M+ + T +L R L + + S + ++ +M
Sbjct: 560 MIGGLCKKGSLSEA-DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS-SVELIEEMKV 617
Query: 179 RGYLPESSTFDYTVTCL 195
G+ +SST + L
Sbjct: 618 CGFSADSSTIKMVIDML 634
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 64/156 (41%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ DA+D M++ P I +N L ++ L + M+ + I D+YT
Sbjct: 79 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
+I +CR K+ A LG PD ++S L+ GR EA M +
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
PD T + ++ L +GR EA ++ E G
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 234
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 231/483 (47%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N+++ LVK +DLA+ + +++ + + +T NI+++ +C+ +D+ + ME
Sbjct: 154 NSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQ 213
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G ++ TY LI+ +C + E F V+ M + + P T ++++G+ + +
Sbjct: 214 KGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVR 273
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A + + NTLL N+ EA I M RG P+ +F +
Sbjct: 274 AKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIG 333
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
L++ G+ P Y +L+ + G E + + +
Sbjct: 334 VSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCAL 393
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+V +YN +++ CK ++ A + EM +R + P+ TF TLI GHCK+ + K L
Sbjct: 394 DVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLF 453
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++ + KPD T+N +ID C+ E A + +EM+ + PN I+Y IL+ C +
Sbjct: 454 GIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNL 513
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G V+ + RL+ +M I P + T N +I+ +CR + KA++ M++ G+ PD+ +Y
Sbjct: 514 GFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITY 573
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ LI +K D+A ME G PD T N+IL +QGR +EA I++ E
Sbjct: 574 NTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIE 633
Query: 494 RGI 496
RGI
Sbjct: 634 RGI 636
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 217/465 (46%), Gaps = 10/465 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI YN +I+A + + A+ MS KP FTYN +I+G+C+ G A
Sbjct: 215 GIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRA 274
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M +G +P+ TY L+ C E + M R V P+ + SL+
Sbjct: 275 KGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGV 334
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL-----SNNSMASEAAAILRKMGDR 179
R +A L+ F R+ T LV + ++Y + N M SEA I KM ++
Sbjct: 335 SSRNGHLDQA---LMYF--RDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQ 389
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G + ++ + L L + + D ++RGV P F T+ L+ K G +
Sbjct: 390 GCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKA 449
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + + ++ +YN++ID FCK M++A E+ EM R I PN +++ L++G
Sbjct: 450 LSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNG 509
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+C V + L ++ G KP T N++I CR+ A + L +M+ GV P+
Sbjct: 510 YCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPD 569
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+ITYN LI + ++ L KM+ + PD+ T+N ++ FCR ++++AE
Sbjct: 570 SITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILR 629
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
M+ G+ PD +Y+ LI + EA + M Q G PD
Sbjct: 630 KMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 218/494 (44%), Gaps = 6/494 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + N +++AL K + ID M D TYN LI+ CR G++ EA
Sbjct: 180 GIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEA 239
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ M G G P ++TY +I+G C R V M + P+ T +L+
Sbjct: 240 FEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVE 299
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + +A ++ + R + ++L+ S N +A R M G +P+
Sbjct: 300 SCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPD 359
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + ++E I D +++G Y ++ L K + + +
Sbjct: 360 NVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFD 419
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +V + ++ +I CK M +A + M ++I P++VT+N LI G CK
Sbjct: 420 EMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTT 479
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E+ K EL ++ P+ ++ +++ C +A EM+ G+ P +T N
Sbjct: 480 EMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCN 539
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF---SM 421
+I+ C GD++++ KM ++ + PD T+N LI F K E +KAFF M
Sbjct: 540 TVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFV---KGEYMDKAFFLINKM 596
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
T GL+PD +Y+ ++ + GR EA+ M + G +PD T ++ V Q
Sbjct: 597 ETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNL 656
Query: 482 EEAHDIVKTSKERG 495
+EA +RG
Sbjct: 657 KEAFRFHDEMLQRG 670
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 196/426 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YNAVI+ L K A F +M PD TYN L+ CR EA
Sbjct: 250 GLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEA 309
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M G +P++ +++ LI + + MK + P+ L++G
Sbjct: 310 KDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILING 369
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R +A E+ + +E+ + NT+L L + ++A A+ +M +RG +P+
Sbjct: 370 YCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPD 429
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + ++ + + ++ +KP TY +L++ K + + N
Sbjct: 430 FCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWN 489
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ N SY ++++ +C + + A + EM + I P LVT NT+I G+C+
Sbjct: 490 EMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSG 549
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ K E L ++ G PD T+N++I+ + + A +++M G+ P+ +TYN
Sbjct: 550 DLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYN 609
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+++ C G + + + +KM I PD T+ LI + + +++A + ML
Sbjct: 610 VILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQR 669
Query: 425 GLRPDN 430
G PD+
Sbjct: 670 GFVPDD 675
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 185/400 (46%), Gaps = 28/400 (7%)
Query: 101 RVLEIMKERNVC-----PNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT 155
R+L+ K+ V P+E + +H + C +P++ E L +K++ N
Sbjct: 14 RILQTHKQLYVIATIRNPSEECIIRYLHTLENCQNPNQ--EPTSSAPPDSFLVEKILLN- 70
Query: 156 LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRG 215
L R+ + ++ ILR + G V + + + ++ TCG+ D +
Sbjct: 71 -LRRVRSKRLSDAQTLILRMIRRSGV--------SRVEIVESLISMSSTCGV-DNLV--- 117
Query: 216 VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT 275
+ LL+ + +A + EG + + + ++N+ N ++ K+ +D A
Sbjct: 118 -------FDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAW 170
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
E+ E+ I N+ T N +++ CKD ++ + L+ + + G D T+N++I+
Sbjct: 171 EVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAY 230
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
CR +A + ++ M G+ P TYN +I LC G R+ +F +M + +SPD
Sbjct: 231 CREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDT 290
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
T+N L+ CR N +A+ F ML G+ PD S+S+LI ++G D+A F
Sbjct: 291 TTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRD 350
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
M+ +G PD+ +++ + G EA +I E+G
Sbjct: 351 MKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQG 390
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 118/239 (49%)
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
++++I + + ++ T+ + +R + ++ N+L+ G K V E+ +
Sbjct: 118 FDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIA 177
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
G + + +T N M++ LC+ H+ +D L +M + G+ + +TYN LI + C G +
Sbjct: 178 RSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLG 237
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+ + M + P ++T+NA+I C+ + +A+ F ML++GL PD +Y+ L+
Sbjct: 238 EAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLL 297
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++ F EAK F M G +PD + + ++ + G ++A + K G+
Sbjct: 298 VESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGL 356
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 6/221 (2%)
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
NLV F+ LI + + ++++ + +L GF NS++ L + + A +
Sbjct: 115 NLV-FDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
+E+ G+ N T NI++ +LC + M+ I DI T+N LI ++CR
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+ +A + SM GL+P F+Y+A+I L K GR+ AK F M G +PD+ T
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTY 293
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERG-----ISFKSFPGL 504
N +L + F EA DI RG ISF S G+
Sbjct: 294 NTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGV 334
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 235/465 (50%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F++M C+P +YN +++ + G +A ++ +M+ +G P+VYT+TI + FC
Sbjct: 99 FERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCI 158
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
R R+L M + N + +++ G ++ +A+ L +++ L
Sbjct: 159 TGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILT 218
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
N L++ L E+ + K+ RG P TF+ + L ++E +L++ +
Sbjct: 219 FNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIV 278
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
G+ P +Y L+ K + VE + YL+ + + N +YN +I+ FCK MM
Sbjct: 279 SEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQ 338
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A +I R+ + P+ T+++LI+G C D ++++ + +E GFK +N+++
Sbjct: 339 NADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
L + AL + +M+E G P+ TYN+++ LC +G ++ + + A
Sbjct: 399 KGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCI 458
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PDI+TFN LI +C+ ++KA + +ML+ G+ PD +Y+ L+ L K+ + D T
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDT 518
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
F +M + GC P+ T N+++E+ + + EA ++ K K RG++
Sbjct: 519 FKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/528 (26%), Positives = 230/528 (43%), Gaps = 71/528 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +N +I L K ++ + F ++ P+ FT+NI I G+CR G +DEA
Sbjct: 211 GICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEA 270
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL++ + G P+V +Y LI GFC ++ E L M V PNE T ++++G
Sbjct: 271 ARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIING 330
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ M A ILR +G++P+
Sbjct: 331 FCKA-----------------------------------GMMQNADKILRDAMFKGFIPD 355
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L D+N + +++G K Y L++ L K G ++ + +
Sbjct: 356 EFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMK 415
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++ +YN+V++ CK+ + A I + + P++ TFNTLI G+CK
Sbjct: 416 DMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQR 475
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ K E+L +L G PD T+N++++ LC+A + ++ +D M+E G PN ITYN
Sbjct: 476 NMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYN 535
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYT--------------------------- 397
ILI S C V+ ++ LF++M+ ++PDI T
Sbjct: 536 ILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKE 595
Query: 398 ---------FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
FN +I +FC + AEK F M PDN++Y +I + K+G D
Sbjct: 596 YKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDL 655
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
A L G P T +L L R EA I+ + GI
Sbjct: 656 AHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGI 703
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/501 (24%), Positives = 231/501 (46%), Gaps = 1/501 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F PS + YNA+++ LV+ A+ + +M PD +T+ I + C G
Sbjct: 102 MDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGR 161
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
ALRL+ M G G N +Y +I GF E + + + M ++ +CP+ T
Sbjct: 162 PTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNK 221
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+H + + + ++ +L + M+R N + L EAA +L + G
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ +++ + L E L + GV+P TY ++ KAG D
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNAD 341
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L + + +Y+ +I+ C M+RA + E ++ +++ +NTL+ G
Sbjct: 342 KILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGL 401
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K V + +L+ ++E G PD +T+N +++ LC+ DA L++ + G P+
Sbjct: 402 SKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDI 461
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
T+N LI C ++ +++ + M + I+PD+ T+N L+ C+ K++ F +
Sbjct: 462 FTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKA 521
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
ML G P+ +Y+ LI++ K + EA + F M+ G PD T ++ L G
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581
Query: 481 FEEAHDI-VKTSKERGISFKS 500
++A+++ V KE S+ +
Sbjct: 582 LDKAYELFVTIEKEYKFSYST 602
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 125/288 (43%), Gaps = 13/288 (4%)
Query: 215 GVKPRFSTYLLLMEAL-----YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
G K TY ++E L ++A DV + N +++ V Y ++ + +
Sbjct: 35 GFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKN--VDSKMLEGV--YIGIMRDYGRKG 90
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+ A + M D P++ ++N +++ + + ++ + + + G PD +T
Sbjct: 91 KVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHT 150
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+ C R AL L+ M G N ++Y +I + LF +M
Sbjct: 151 IRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQ 210
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
I PDI TFN LI C+ ++++EK F ++ G+ P+ F+++ I+ L + G DEA
Sbjct: 211 GICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEA 270
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA----HDIVKTSKE 493
+ S+ G PD + N ++ + + EA H +V + E
Sbjct: 271 ARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE 318
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 36/215 (16%)
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE------------------------ 353
E GFK T+ MI+ L +FE D L+EM +
Sbjct: 33 EDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKV 92
Query: 354 ------------WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+ P+ +YN ++ L G +++ +++ +M+ I PD+YT
Sbjct: 93 QEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIR 152
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
++SFC + A + +M G + SY A+I K EA F M + G
Sbjct: 153 MKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGI 212
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
PD T N ++ L ++G +E+ + +RG+
Sbjct: 213 CPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGV 247
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
S ST ++N +I+A ++ +A F +M C PD +TY ++I C+ G +D A
Sbjct: 599 SYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHT 658
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNE 115
+ + G P+ T +++ C R++E ++ +M + + P E
Sbjct: 659 FLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEE 707
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/495 (27%), Positives = 246/495 (49%), Gaps = 35/495 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ A+ K DL ++M + +TYNILI+ CR + AL L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P++ T + L++G+C+ KR+++ +++ M E P+ T +L+HG+F
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 128 CLDPHKAFELLIRFMER--EP--LTQKLVCNTLLYR--------LSNNSMASEAAA---- 171
+A L+ R ++R +P +T +V N L R L N A++ A
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 172 -------------------ILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
+ +M ++G P T+ ++CL ++ +L I
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+R + P T+ L++A K G+ VE ++ + + K + ++ +Y+ +I+ FC + +D
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + M +D PN+VT+NTLI+G CK + + EL + + G + T+ ++I
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
+A ++A +MV GV PN +TYN L+ LC G + +++ +F+ +Q ++
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
P IYT+N +I+ C+ K+E F S+ G++PD Y+ +I + G +EA
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562
Query: 453 FLSMEQNGCNPDSYT 467
F M ++G PDS T
Sbjct: 563 FRKMREDGPLPDSGT 577
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 175/368 (47%), Gaps = 4/368 (1%)
Query: 133 KAFELLIRF---MEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
K F+L+I M+R ++ L N L+ S S A A+L KM GY P T
Sbjct: 99 KKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTL 158
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ G +++ ++D ++ G +P T+ L+ L+ + E ++ + +
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
N+ +Y +V++ CK +D A + +M I N+V ++T+I CK
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 278
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
L + G +P+ T++S+I CLC R+ DA LS+M+E + PN +T+N LI
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
+ G + + +L+ +M I PDI+T+++LI FC +++++A+ F M++ P
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+ +Y+ LI K+ R DE + F M Q G ++ T ++ Q + A +
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 489 KTSKERGI 496
K G+
Sbjct: 459 KQMVSDGV 466
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 130/284 (45%), Gaps = 35/284 (12%)
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K R + ++ +N ++ K+ D + +M+ I+ NL T+N LI+ C+ +++
Sbjct: 78 KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 137
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI------ 361
LL +++ G++P T +S+++ C R DA+ + +MVE G P+TI
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 362 -----------------------------TYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
TY +++ LC GD+ + L KM+A +I
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 257
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
++ ++ +I S C+ + A F M G+RP+ +YS+LI L R+ +A +
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL 317
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M + NP+ T N +++ V++G+ EA + +R I
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 240/502 (47%), Gaps = 7/502 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +N ++ AL +++ + A L ++MS PD T+ L+ G G ++ A
Sbjct: 84 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 143
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LR+ +M +G + T +LI+G+C RV + ++ P++ T + V+G
Sbjct: 144 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNG 203
Query: 125 VFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ C + H A +++ ++ N ++ L N EA IL +M DRG L
Sbjct: 204 L--CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 261
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ +TF+ + L TG L E + +GV P T+ +L+ AL K G R
Sbjct: 262 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 321
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + +YN +ID C + + +A ++ ++M + +T+NT+I G CK
Sbjct: 322 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 381
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + E+ + G + TFN++ID LC+ + +DA + +++M+ G+ PN IT
Sbjct: 382 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNIT 441
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN ++ C GD+ ++ + + M A+ D+ T+ LI C+ + + A K M
Sbjct: 442 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 501
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR-F 481
G+RP +Y+ ++++L + +A F M + G PD+ T ++ L + G
Sbjct: 502 IKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPI 561
Query: 482 EEAHDIVKTSKERGI--SFKSF 501
+EA D + ++G F SF
Sbjct: 562 KEAFDFMLEMVDKGFIPEFSSF 583
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 226/493 (45%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
GI T +YN +++ LV+ + + L + +M KPD T+N L+ +CR V
Sbjct: 47 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 106
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A+ ++++M G AP+ T+T L+ GF + RV M E + TV L+
Sbjct: 107 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 166
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G + A + + + ++ NT + L N A ++ M G+
Sbjct: 167 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 226
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ T++ V CL L E GIL+ + RG P +T+ L+ AL R E
Sbjct: 227 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 286
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
V + +V ++N++I+ CKV A + EM++ P+ VT+NTLI C
Sbjct: 287 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 346
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ K +LL + G T+N++ID LC+ R E+A + +M G+ N IT
Sbjct: 347 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 406
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+N LI LC + + L +M ++ + P+ T+N+++ +C+ I+KA +M
Sbjct: 407 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 466
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G D +Y LI L K+GR A + M G P N +L++L ++
Sbjct: 467 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIR 526
Query: 483 EAHDIVKTSKERG 495
+A + + E G
Sbjct: 527 DALSLFREMAEVG 539
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/473 (25%), Positives = 220/473 (46%), Gaps = 2/473 (0%)
Query: 24 NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTY 83
+++DL + Q + Q D YN L++ + + + +M G P+V T+
Sbjct: 35 DAVDLILNQLQPLFGIQA--DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 92
Query: 84 TILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME 143
L+ C A +V +LE M R V P+E T +L+ G A + R +E
Sbjct: 93 NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 152
Query: 144 REPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
K+ N L+ +A +++ G+ P+ T++ V L +
Sbjct: 153 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 212
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
++D ++ G P TY +++ L K G+ E LN + + ++ ++N +I
Sbjct: 213 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 272
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
C N ++ A ++ R++ + ++P++ TFN LI+ CK + H L + G P
Sbjct: 273 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 332
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D+ T+N++ID LC + ALD L +M G P +TITYN +I LC + + +F
Sbjct: 333 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 392
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+M IS + TFN LI C+ KI+ A + M++ GL+P+N +Y++++ K
Sbjct: 393 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQ 452
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G +A +M NG D T ++ L + GR + A +++ + +G+
Sbjct: 453 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGM 505
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 187/384 (48%), Gaps = 6/384 (1%)
Query: 120 SLVHGVFRCLDPHKAFELLIRFM--EREPL----TQKLVCNTLLYRLSNNSMASEAAAIL 173
+VH + + F+ + + + +PL +V N LL L S ++
Sbjct: 18 GVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVY 77
Query: 174 RKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
+MG RG P+ TF+ + L + +L+ RGV P +T+ LM+ +
Sbjct: 78 SEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEE 137
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
G R + + + + N++I+ +CK+ ++ A ++ P+ +T+
Sbjct: 138 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 197
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
NT ++G C++ V +++ ++++ G PD FT+N +++CLC+ + E+A L++MV+
Sbjct: 198 NTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVD 257
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
G P+ T+N LI +LC + +L L +++ +SPD+YTFN LI + C++
Sbjct: 258 RGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHL 317
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A + F M G PD +Y+ LI L G+ +A ME GC + T N I++
Sbjct: 318 ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 377
Query: 474 TLVQQGRFEEAHDIVKTSKERGIS 497
L ++ R EEA ++ +GIS
Sbjct: 378 GLCKKMRIEEAEEVFDQMDLQGIS 401
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 196/444 (44%), Gaps = 36/444 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN ++ L +++ + A M + PD FTYNI+++ +C+ G ++EA
Sbjct: 189 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 248
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ QM G P++ T+ LI C R+ E + + + V P+ T L++
Sbjct: 249 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 308
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + DPH A L +M + G P+
Sbjct: 309 LCKVGDPHLALRL-----------------------------------FEEMKNSGCTPD 333
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L + L + +L G TY +++ L K R E + +
Sbjct: 334 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 393
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N ++N +ID CK +D A E+ +M + PN +T+N++++ +CK
Sbjct: 394 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQG 453
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ K ++L + GF+ D T+ ++I+ LC+A R + AL L M G+ P YN
Sbjct: 454 DIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYN 513
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR-MNKIEKAEKAFFSMLT 423
+++SL ++ +L LF++M PD T+ + + CR I++A M+
Sbjct: 514 PVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVD 573
Query: 424 LGLRPDNFSYSALIKALIKSGRFD 447
G P+ S+ L + L+ G D
Sbjct: 574 KGFIPEFSSFRMLAEGLLNLGMDD 597
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 145/336 (43%), Gaps = 36/336 (10%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ G+SP +N +I+AL K LA F++M C PD TYN LI +C +G
Sbjct: 290 VTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 349
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ +AL L+K ME G + TY +IDG C R+ E V + M + + N T +
Sbjct: 350 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 409
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G+ + AFEL+ N M SE G
Sbjct: 410 LIDGLCKDKKIDDAFELI------------------------NQMISE-----------G 434
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P + T++ +T D+ + IL+T G + TY L+ L KAGR
Sbjct: 435 LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 494
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L + + +YN V+ + N + A + REM + P+ +T+ + G
Sbjct: 495 KVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGL 554
Query: 301 CK-DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
C+ + + + ++ +++ GF P+ +F + + L
Sbjct: 555 CRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 590
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/531 (28%), Positives = 248/531 (46%), Gaps = 35/531 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN++ID L K+ ++D A Q M PD TYNI+I G C +G ++EA
Sbjct: 230 GLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEA 289
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+RL+K+M G G P+V TY++LI +C R AE V + M + PN L+HG
Sbjct: 290 VRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHG 349
Query: 125 ---------VFRCLD---------PHKAFELLIRFMEREPLTQKLVC------------- 153
V LD H+AF +LI + K +
Sbjct: 350 YATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPD 409
Query: 154 ----NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+T+++ L +A +M G P +F + L + + + +
Sbjct: 410 VVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAF 469
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
I RG+ P +M+ L K GR VE + + V + +V SYN +ID +C V
Sbjct: 470 EMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVG 529
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
MD + + M + P+ T+N+L++G+ K+ V L + K T N
Sbjct: 530 KMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSN 589
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
M+ L +A R A + +MV+ G TYN ++ LC V +LR+F+ +++
Sbjct: 590 IMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSK 649
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
D+ TF+ +I + ++ +I++A+ F +M+ G PD +YS +IK+ I+ G +E+
Sbjct: 650 EFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEES 709
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
FLSME+NGC DS+ N+I+ L+++G A + E+ S ++
Sbjct: 710 DNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEA 760
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 136/537 (25%), Positives = 256/537 (47%), Gaps = 51/537 (9%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP+ YN VID K +D AY F +M PD TYN LI G+C+ +D+A+
Sbjct: 197 SPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVA 256
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH--- 123
+++ M G P+ TY I+I G+C+ ++ E R+L+ M + P+ T L+
Sbjct: 257 ILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYC 316
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAI-LRKMGD---R 179
+ RC + F+ ++R ++ N+ +Y + + A++ A I +R + D R
Sbjct: 317 KIGRCAEARSVFDSMVRKGQKP--------NSTIYHILLHGYATKGALIDVRDLLDLMIR 368
Query: 180 GYLP-ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+P E F+ + +++ + G++P +Y ++ L K GR +
Sbjct: 369 DGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVED 428
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ N + + L N+ S+ +I C + + E+ EM +R I P+ + NT++
Sbjct: 429 AVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMD 488
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
CK+ V + ++ M++ G KPD ++N++ID C + ++++ L MV G+ P
Sbjct: 489 NLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRP 548
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKM--------------------QADRI--SPDIY 396
++ TYN L+ G V +L L+++M QA RI + ++Y
Sbjct: 549 DSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELY 608
Query: 397 -------------TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
T+N ++ C + +++A + F + + D ++S +I AL+K
Sbjct: 609 MKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKV 668
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
GR DEAK F +M G PD T +L++++ +++G EE+ ++ + ++ G + S
Sbjct: 669 GRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADS 725
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 216/456 (47%), Gaps = 4/456 (0%)
Query: 47 TYNILIHGICRIGVVDEALRLV-KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEI 105
T N LI G+C D+A+ +V ++M LGY P+V++Y LI G C K+ E +L
Sbjct: 128 TLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIH 187
Query: 106 MKER---NVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
M N PN + +++ G F+ + KA+ L M + + N+L+ L
Sbjct: 188 MTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCK 247
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+A AIL+ M D+G +P++ T++ + + L E +L G++P T
Sbjct: 248 AQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVT 307
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y LL++ K GR E + + + N Y++++ + + ++ M
Sbjct: 308 YSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMI 367
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
I FN LI + K V K + + G +PD +++++I LC+ R E
Sbjct: 368 RDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVE 427
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
DA+ ++MV G+ PN I++ LI LC+IG+ + L +M I PD N ++
Sbjct: 428 DAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIM 487
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+ C+ ++ +A+ F ++ +G++PD SY+ LI G+ DE+ + M G
Sbjct: 488 DNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLR 547
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
PDS+T N +L + GR E+A + + + + F
Sbjct: 548 PDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKF 583
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 164/354 (46%), Gaps = 6/354 (1%)
Query: 148 TQKLVCNTLLYRLSNNSMASEAA-AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
Q + N L+ L + + +A + R+M + GY P+ +++ + L E
Sbjct: 124 VQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALE 183
Query: 207 ILDTFIKRG---VKPRFSTYLLLMEALYKAGRDVEGDRYLNH-VFKDRLVSNVNSYNMVI 262
+L G P +Y +++ +K G +V+ +L H + L +V +YN +I
Sbjct: 184 LLIHMTADGGYNCSPNVVSYNTVIDGFFKEG-EVDKAYFLFHEMMGQGLPPDVVTYNSLI 242
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
D CK MD+A I + M D+ + P+ T+N +I G+C ++ + LL + G +
Sbjct: 243 DGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQ 302
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
PD T++ +I C+ R +A MV G PN+ Y+IL+ G + L
Sbjct: 303 PDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDL 362
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
M D I + FN LI ++ + ++KA AF M GLRPD SYS +I L K
Sbjct: 363 LDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCK 422
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+GR ++A F M G +P+ + ++ L G +++ ++ RGI
Sbjct: 423 TGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGI 476
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 204/488 (41%), Gaps = 44/488 (9%)
Query: 9 STRLYNAVIDALVKSNSID-------LAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
S +N+V+ + +++S LA F M ILI C +G +
Sbjct: 48 SVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRL 107
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF-RVLEIMKERNVCPNEATVRS 120
D A G+ T LI G C+ R + V M E P+ + +
Sbjct: 108 DLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNA 167
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G+ +A ELLI D G
Sbjct: 168 LIKGLCVEKKSQEALELLIHMT----------------------------------ADGG 193
Query: 181 Y--LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
Y P +++ + ++++ + + +G+ P TY L++ L KA +
Sbjct: 194 YNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDK 253
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
L H+F ++ + +YN++I +C + ++ A + ++M + P++VT++ LI
Sbjct: 254 AVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQ 313
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
+CK + R + ++ G KP+ ++ ++ D D L M+ G+P
Sbjct: 314 YYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPF 373
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+NILI + G V +++ F +M+ + + PD+ +++ +I C+ ++E A F
Sbjct: 374 EHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHF 433
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M++ GL P+ S+++LI L G + + ++ M G +PD+ N I++ L ++
Sbjct: 434 NQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKE 493
Query: 479 GRFEEAHD 486
GR EA D
Sbjct: 494 GRVVEAQD 501
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 130/252 (51%), Gaps = 5/252 (1%)
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEIC-REMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
V NV + N +I C N D A ++ R M + P++ ++N LI G C + + +
Sbjct: 124 VQNV-TLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEAL 182
Query: 311 ELLV-MLLECGF--KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
ELL+ M + G+ P+ ++N++ID + + A EM+ G+PP+ +TYN LI
Sbjct: 183 ELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLI 242
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC + +++ + Q M + PD T+N +I+ +C + ++E+A + M GL+
Sbjct: 243 DGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQ 302
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD +YS LI+ K GR EA+ F SM + G P+S +++L +G + D+
Sbjct: 303 PDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDL 362
Query: 488 VKTSKERGISFK 499
+ GI F+
Sbjct: 363 LDLMIRDGIPFE 374
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 180/402 (44%), Gaps = 8/402 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI R +N +I A K ++D A F +M + +PD +Y+ +IH +C+ G V++A
Sbjct: 370 GIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDA 429
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ QM G +PN+ ++T LI G C+ +V + M R + P+ + +++
Sbjct: 430 VYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDN 489
Query: 125 V---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ R ++ F+++I + + NTL+ E+ L +M G
Sbjct: 490 LCKEGRVVEAQDFFDMVIHIGVKPDVVSY---NTLIDGYCFVGKMDESIKQLDRMVSIGL 546
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P+S T++ + + + + ++ VK T +++ L++AGR V R
Sbjct: 547 RPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAA-R 605
Query: 242 YLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L DR + +YN V+ C+ + +D A + ++R ++ ++ TF+ +I+
Sbjct: 606 ELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINAL 665
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K + + + L ++ G PD T++ MI E++ + M + G ++
Sbjct: 666 LKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADS 725
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
NI++R L GDV R+ K+ S + T LI
Sbjct: 726 HMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLI 767
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 108/259 (41%), Gaps = 35/259 (13%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P YN +ID +D + + +M +PD +TYN L++G + G V++
Sbjct: 509 IGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVED 568
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L ++M FR K+ C + + ++H
Sbjct: 569 ALALYREM----------------------------FR-----KDVKFCAITSNI--MLH 593
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+F+ A EL ++ ++R + NT+L L NS EA + + + +
Sbjct: 594 GLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFEL 653
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF + L+ ++E + + RG P TY L++++ + G E D
Sbjct: 654 DVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLF 713
Query: 244 NHVFKDRLVSNVNSYNMVI 262
+ K+ ++ + N+++
Sbjct: 714 LSMEKNGCAADSHMLNIIV 732
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 92/224 (41%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P + YN++++ K+ ++ A +++M K T NI++HG+ + G +
Sbjct: 544 IGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVA 603
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L +M G + TY ++ G C V E R+ E ++ + + T +++
Sbjct: 604 ARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVIN 663
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +A L + R P+ + + ++ + E+ + M G
Sbjct: 664 ALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAA 723
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
+S + V L+ D+ L ++ ST LL+
Sbjct: 724 DSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLI 767
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 238/492 (48%), Gaps = 1/492 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ + ++ +LVK+N ++ +Y F+ M PD + ++ I+ C+ G V++A
Sbjct: 207 GVFPTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDA 265
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L ME LG +PNV TY LI G C + E FR E M + V T L++G
Sbjct: 266 IQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLING 325
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + ++A +L +E+ ++V NTL+ +A I M +G P
Sbjct: 326 LMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPN 385
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S T + + + + IL+ + RG + ++ L R R+L
Sbjct: 386 SVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLR 445
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N ++ CK A E+ + ++ NLVT N LI G CK
Sbjct: 446 EMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTG 505
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + LL +LE GF DK T+N++I C+ + E+ EMV+ G+ P+T TYN
Sbjct: 506 NMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYN 565
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI +C IG + ++ L+ + ++ + P++YT+ +I +C+ +KIE+ EK F +LT
Sbjct: 566 LLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ 625
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
L ++ Y+ LI+A ++G EA + M G P + T + ++ + GR E+A
Sbjct: 626 NLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA 685
Query: 485 HDIVKTSKERGI 496
++ ++ G+
Sbjct: 686 KCLIDEMRKEGL 697
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 129/529 (24%), Positives = 241/529 (45%), Gaps = 37/529 (6%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+SP+ YN +I L K ++D A+ ++M D TY++LI+G+ ++ +E
Sbjct: 275 LGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNE 334
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++K+ G+ PN Y LIDG+C + + R+ M + + PN T+ S++
Sbjct: 335 ANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQ 394
Query: 124 G-------------------------------VFRCLDPHKAFELLIRFMEREPLTQKLV 152
G + L + FE +RF+ RE L + +
Sbjct: 395 GFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFL-REMLLRNMR 453
Query: 153 CN-----TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGI 207
N TL+ L S+A + ++ ++G+ T + + L ++ E +
Sbjct: 454 PNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRL 513
Query: 208 LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
L ++RG TY L+ K G+ EG + + K + + +YN++I C+
Sbjct: 514 LKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCR 573
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+ +D A + E + RD+ PN+ T+ +I G+CK ++ + +L LL + +
Sbjct: 574 IGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVV 633
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+N++I CR +A +M G+PP T TY+ LI +C IG + + L +M+
Sbjct: 634 YNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMR 693
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ + P++ + ALI +C++ +++K M + + P+ +Y+ +I KSG
Sbjct: 694 KEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMK 753
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
A + M G PD+ T N++ ++G+ EE I + G+
Sbjct: 754 TAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGL 802
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 225/473 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P+ +YN +ID K ++ A M P+ T N +I G C+IG +++A
Sbjct: 346 GFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQA 405
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++++M G++ N +T +I C R R L M RN+ PN+ + +LV G
Sbjct: 406 ECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGG 465
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A EL R +E+ + N L++ L EA +L+KM +RG++ +
Sbjct: 466 LCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLD 525
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ ++ + E + +K+G++P TY LL+ + + G+ E N
Sbjct: 526 KITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWN 585
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
LV NV +Y ++ID +CK + ++ ++ E+ +++ N V +NTLI +C++
Sbjct: 586 ECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNG 645
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +L + G P T++S+I +C R EDA + EM + G+ PN + Y
Sbjct: 646 NTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYT 705
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C +G + + + + Q+M + I P+ T+ +I + + ++ A K M+
Sbjct: 706 ALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK 765
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
G+ PD +Y+ L K G+ +E + M Q G D T ++ Q
Sbjct: 766 GIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQ 818
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 1/181 (0%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G P T ++ L +A+ E + + E + GV P+ ++ I + C G V +
Sbjct: 207 GVFPTVKTCTFLLSSLVKANELEKSY-WVFETMRQGVSPDVYLFSTAINAFCKGGKVEDA 265
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
++LF M+ +SP++ T+N LI C+ +++A + M+ G+ +YS LI
Sbjct: 266 IQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLING 325
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
L+K +F+EA + G P+ N +++ + G +A I +GI+
Sbjct: 326 LMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPN 385
Query: 500 S 500
S
Sbjct: 386 S 386
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 238/492 (48%), Gaps = 1/492 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ + ++ +LVK+N ++ +Y F+ M PD + ++ I+ C+ G V++A
Sbjct: 274 GVFPTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDA 332
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L ME LG +PNV TY LI G C + E FR E M + V T L++G
Sbjct: 333 IQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLING 392
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + ++A +L +E+ ++V NTL+ +A I M +G P
Sbjct: 393 LMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPN 452
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S T + + + + IL+ + RG + ++ L R R+L
Sbjct: 453 SVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLR 512
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N ++ CK A E+ + ++ NLVT N LI G CK
Sbjct: 513 EMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTG 572
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + LL +LE GF DK T+N++I C+ + E+ EMV+ G+ P+T TYN
Sbjct: 573 NMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYN 632
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI +C IG + ++ L+ + ++ + P++YT+ +I +C+ +KIE+ EK F +LT
Sbjct: 633 LLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ 692
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
L ++ Y+ LI+A ++G EA + M G P + T + ++ + GR E+A
Sbjct: 693 NLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA 752
Query: 485 HDIVKTSKERGI 496
++ ++ G+
Sbjct: 753 KCLIDEMRKEGL 764
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 132/533 (24%), Positives = 243/533 (45%), Gaps = 41/533 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+SP+ YN +I L K ++D A+ ++M D TY++LI+G+ ++ +E
Sbjct: 342 LGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNE 401
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++K+ G+ PN Y LIDG+C + + R+ M + + PN T+ S++
Sbjct: 402 ANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQ 461
Query: 124 G-------------------------------VFRCLDPHKAFELLIRFMEREPLTQKLV 152
G + L + FE +RF+ RE L + +
Sbjct: 462 GFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFL-REMLLRNMR 520
Query: 153 CN-----TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGI 207
N TL+ L S+A + ++ ++G+ T + + L ++ E +
Sbjct: 521 PNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRL 580
Query: 208 LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
L ++RG TY L+ K G+ EG + + K + + +YN++I C+
Sbjct: 581 LKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCR 640
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+ +D A + E + RD+ PN+ T+ +I G+CK ++ + +L LL + +
Sbjct: 641 IGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVV 700
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+N++I CR +A +M G+PP T TY+ LI +C IG + + L +M+
Sbjct: 701 YNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMR 760
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ + P++ + ALI +C++ +++K M + + P+ +Y+ +I KSG
Sbjct: 761 KEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMK 820
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
A + M G PD+ T N++ ++G+ EE K E G+ F S
Sbjct: 821 TAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG----KLLAEDGVGFNS 869
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 1/181 (0%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G P T ++ L +A+ E + M + GV P+ ++ I + C G V +
Sbjct: 274 GVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDA 332
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
++LF M+ +SP++ T+N LI C+ +++A + M+ G+ +YS LI
Sbjct: 333 IQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLING 392
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
L+K +F+EA + G P+ N +++ + G +A I +GI+
Sbjct: 393 LMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPN 452
Query: 500 S 500
S
Sbjct: 453 S 453
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 240/502 (47%), Gaps = 7/502 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +N ++ AL +++ + A L ++MS PD T+ L+ G G ++ A
Sbjct: 176 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LR+ +M +G + T +LI+G+C RV + ++ P++ T + V+G
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNG 295
Query: 125 VFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ C + H A +++ ++ N ++ L N EA IL +M DRG L
Sbjct: 296 L--CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ +TF+ + L TG L E + +GV P T+ +L+ AL K G R
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + +YN +ID C + + +A ++ ++M + +T+NT+I G CK
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + E+ + G + TFN++ID LC+ + +DA + +++M+ G+ PN IT
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNIT 533
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN ++ C GD+ ++ + + M A+ D+ T+ LI C+ + + A K M
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 593
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR-F 481
G+RP +Y+ ++++L + +A F M + G PD+ T ++ L + G
Sbjct: 594 IKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPI 653
Query: 482 EEAHDIVKTSKERGI--SFKSF 501
+EA D + ++G F SF
Sbjct: 654 KEAFDFMLEMVDKGFIPEFSSF 675
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 226/493 (45%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
GI T +YN +++ LV+ + + L + +M KPD T+N L+ +CR V
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 198
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A+ ++++M G AP+ T+T L+ GF + RV M E + TV L+
Sbjct: 199 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G + A + + + ++ NT + L N A ++ M G+
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ T++ V CL L E GIL+ + RG P +T+ L+ AL R E
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
V + +V ++N++I+ CKV A + EM++ P+ VT+NTLI C
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ K +LL + G T+N++ID LC+ R E+A + +M G+ N IT
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+N LI LC + + L +M ++ + P+ T+N+++ +C+ I+KA +M
Sbjct: 499 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 558
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G D +Y LI L K+GR A + M G P N +L++L ++
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIR 618
Query: 483 EAHDIVKTSKERG 495
+A + + E G
Sbjct: 619 DALSLFREMAEVG 631
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 122/473 (25%), Positives = 220/473 (46%), Gaps = 2/473 (0%)
Query: 24 NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTY 83
+++DL + Q + Q D YN L++ + + + +M G P+V T+
Sbjct: 127 DAVDLILNQLQPLFGIQA--DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 184
Query: 84 TILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME 143
L+ C A +V +LE M R V P+E T +L+ G A + R +E
Sbjct: 185 NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244
Query: 144 REPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
K+ N L+ +A +++ G+ P+ T++ V L +
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 304
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
++D ++ G P TY +++ L K G+ E LN + + ++ ++N +I
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
C N ++ A ++ R++ + ++P++ TFN LI+ CK + H L + G P
Sbjct: 365 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D+ T+N++ID LC + ALD L +M G P +TITYN +I LC + + +F
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+M IS + TFN LI C+ KI+ A + M++ GL+P+N +Y++++ K
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQ 544
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G +A +M NG D T ++ L + GR + A +++ + +G+
Sbjct: 545 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGM 597
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 208/445 (46%), Gaps = 15/445 (3%)
Query: 62 DEALRLVKQM---EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
D ALR++ + P VY I G A + +V V E+ +E
Sbjct: 55 DAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVL-VAEMRRE-----GHQVK 108
Query: 119 RSLVHGVFRCLDPHKAFELLIRFM--EREPL----TQKLVCNTLLYRLSNNSMASEAAAI 172
+VH + + F+ + + + +PL +V N LL L S ++
Sbjct: 109 LGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESV 168
Query: 173 LRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK 232
+MG RG P+ TF+ + L + +L+ RGV P +T+ LM+ +
Sbjct: 169 YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVE 228
Query: 233 AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
G R + + + + N++I+ +CK+ ++ A ++ P+ +T
Sbjct: 229 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQIT 288
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+NT ++G C++ V +++ ++++ G PD FT+N +++CLC+ + E+A L++MV
Sbjct: 289 YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 348
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
+ G P+ T+N LI +LC + +L L +++ +SPD+YTFN LI + C++
Sbjct: 349 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPH 408
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
A + F M G PD +Y+ LI L G+ +A ME GC + T N I+
Sbjct: 409 LALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTII 468
Query: 473 ETLVQQGRFEEAHDIVKTSKERGIS 497
+ L ++ R EEA ++ +GIS
Sbjct: 469 DGLCKKMRIEEAEEVFDQMDLQGIS 493
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 196/444 (44%), Gaps = 36/444 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN ++ L +++ + A M + PD FTYNI+++ +C+ G ++EA
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ QM G P++ T+ LI C R+ E + + + V P+ T L++
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + DPH A L +M + G P+
Sbjct: 401 LCKVGDPHLALRL-----------------------------------FEEMKNSGCTPD 425
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L + L + +L G TY +++ L K R E + +
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N ++N +ID CK +D A E+ +M + PN +T+N++++ +CK
Sbjct: 486 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQG 545
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ K ++L + GF+ D T+ ++I+ LC+A R + AL L M G+ P YN
Sbjct: 546 DIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYN 605
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR-MNKIEKAEKAFFSMLT 423
+++SL ++ +L LF++M PD T+ + + CR I++A M+
Sbjct: 606 PVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVD 665
Query: 424 LGLRPDNFSYSALIKALIKSGRFD 447
G P+ S+ L + L+ G D
Sbjct: 666 KGFIPEFSSFRMLAEGLLNLGMDD 689
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 145/336 (43%), Gaps = 36/336 (10%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ G+SP +N +I+AL K LA F++M C PD TYN LI +C +G
Sbjct: 382 VTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ +AL L+K ME G + TY +IDG C R+ E V + M + + N T +
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 501
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G+ + AFEL+ N M SE G
Sbjct: 502 LIDGLCKDKKIDDAFELI------------------------NQMISE-----------G 526
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P + T++ +T D+ + IL+T G + TY L+ L KAGR
Sbjct: 527 LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 586
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L + + +YN V+ + N + A + REM + P+ +T+ + G
Sbjct: 587 KVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGL 646
Query: 301 CK-DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
C+ + + + ++ +++ GF P+ +F + + L
Sbjct: 647 CRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 248/503 (49%), Gaps = 20/503 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNS-----IDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
G +P+ YNAV+DAL++ +S D A F+ M + P+ +TYN++I G+ G
Sbjct: 162 GFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQG 221
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+++ L +++ME G +PNV TY LID C K+V E +L M V N +
Sbjct: 222 DLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYN 281
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
S+++G+ + EL+ + + ++ NTL+ + +L +M +
Sbjct: 282 SVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGK 341
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G P T+ + C+ +L+ I D RG++P TY L++ + G E
Sbjct: 342 GLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEA 401
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ L+ + +V +YN ++ +C + + A I R M +R + P++V+++T+I+G
Sbjct: 402 YKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAG 461
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
C++ E+ K ++ ++E G PD T++S+I LC + +A D EM+ G+PP+
Sbjct: 462 FCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPD 521
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+TY LI + C G+++++LRL +M PD T++ LI + + + A++
Sbjct: 522 EVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLL 581
Query: 420 SMLTLGLRPDNFSYSALI-----------KALIKS----GRFDEAKQTFLSMEQNGCNPD 464
+ PD+ +Y+ LI + L+K G +EA + F +M Q P+
Sbjct: 582 KLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPN 641
Query: 465 SYTSNLILETLVQQGRFEEAHDI 487
+ NL++ + G +A+++
Sbjct: 642 AAIYNLMIHGHSRGGNVHKAYNL 664
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 218/443 (49%), Gaps = 7/443 (1%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGF-----CNAKRVAEVFRV 102
+++++ + R+G V +AL L+ G+AP V +Y ++D N + + RV
Sbjct: 135 FDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERV 194
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLS 161
M V PN T ++ GV D K + R ME+E ++ +V NTL+
Sbjct: 195 FRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFM-RKMEKEGISPNVVTYNTLIDASC 253
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
EA A+LR M G +++ + L ++E +++ +G+ P
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEV 313
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
TY L+ K G +G L+ + L NV +Y +I+C CK + RA EI +M
Sbjct: 314 TYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQM 373
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
R R + PN T+ TLI G C+ +++ ++L ++ GF P T+N+++ C R
Sbjct: 374 RVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRV 433
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
++A+ L MVE G+PP+ ++Y+ +I C ++ ++ ++ ++M + PD T+++L
Sbjct: 434 QEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSL 493
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
IQ C K+ +A F M+ GL PD +Y++LI A G +A + M Q G
Sbjct: 494 IQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGF 553
Query: 462 NPDSYTSNLILETLVQQGRFEEA 484
PD+ T ++++ L ++ R + A
Sbjct: 554 LPDNVTYSVLINGLNKKARTKVA 576
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 173/351 (49%), Gaps = 1/351 (0%)
Query: 147 LTQKLVCNTLLYRLSNNSM-ASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
L+ V + LL R S+N +A + R M G P T++ + +V+ DL +
Sbjct: 168 LSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGL 227
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
G + K G+ P TY L++A K + E L + + +N+ SYN VI+
Sbjct: 228 GFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGL 287
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C M E+ EMR + + P+ VT+NTL++G CK+ +H+ LL ++ G P+
Sbjct: 288 CGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNV 347
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T+ ++I+C+C+A A++ +M G+ PN TY LI C G + + ++ +
Sbjct: 348 VTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSE 407
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M SP + T+NAL+ +C + ++++A M+ GL PD SYS +I +
Sbjct: 408 MIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERE 467
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+A Q M + G PD+ T + +++ L Q + EA D+ + RG+
Sbjct: 468 LGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGL 518
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 183/405 (45%), Gaps = 15/405 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP+ Y +I+ + K+ ++ A F QM V +P+ TY LI G C+ G+++EA
Sbjct: 342 GLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEA 401
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ +M G++P+V TY L+ G+C RV E +L M ER + P+ + +++ G
Sbjct: 402 YKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAG 461
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + KAF++ +E+ L + ++L+ L EA + R+M RG P+
Sbjct: 462 FCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPD 521
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + +L++ + D ++RG P TY +L+ L K R R L
Sbjct: 522 EVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLL 581
Query: 245 HVFKDRLVSNVNSYNMVID---------------CFCKVNMMDRATEICREMRDRDIAPN 289
+F + V + +YN +I+ FC +M+ A + + M R+ PN
Sbjct: 582 KLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPN 641
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+N +I GH + VHK L + L F +++ L R ++ L
Sbjct: 642 AAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQ 701
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
++ + +L+ G++ L + +M D + PD
Sbjct: 702 NILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPD 746
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 119/248 (47%), Gaps = 5/248 (2%)
Query: 255 VNSYNMVIDCFCKVNM-----MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
V SYN V+D + + D A + R+M ++PN+ T+N +I G ++ K
Sbjct: 167 VLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKG 226
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+ + + G P+ T+N++ID C+ + ++A+ L M GV N I+YN +I
Sbjct: 227 LGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVING 286
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
LC G ++ L ++M+ + PD T+N L+ FC+ + + M+ GL P+
Sbjct: 287 LCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPN 346
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y+ LI + K+G A + F M G P+ T +++ Q+G EA+ ++
Sbjct: 347 VVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLS 406
Query: 490 TSKERGIS 497
G S
Sbjct: 407 EMIVSGFS 414
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 226/466 (48%), Gaps = 16/466 (3%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P T+N L+HG+C + EAL L QM PNV T+T L++G C RV E +
Sbjct: 149 PTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVAL 204
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLS 161
L+ M E + PN+ T ++V G+ + D A LL + E + +V NT++ L
Sbjct: 205 LDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLW 264
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
+ S+A + +M ++ P+ T++ + ++ +L ++R + P
Sbjct: 265 KDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVV 324
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
T+ L+ A K G+ E + + + ++ + +Y+ +ID FCK N +D A +
Sbjct: 325 TFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLT 384
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+ +P+++TFNTLI+G+C+ V +LL + E G + T+ ++I C+
Sbjct: 385 PTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDL 444
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR----------- 390
A D L EM+ GV PN +T N L+ LC G + +L +F+ MQ +
Sbjct: 445 NAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNG 504
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ PD+ T+N LI K +AE+ + M G+ PD +YS++I L K R DEA
Sbjct: 505 VEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 564
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
Q F SM +PD T N ++ + G ++ ++ +RGI
Sbjct: 565 QMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGI 610
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 129/509 (25%), Positives = 240/509 (47%), Gaps = 18/509 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I+ LG P+ +N ++ L + I A F QM CKP+ T+ L++G+CR G
Sbjct: 142 ITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGR 197
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE-RNVCPNEATVR 119
V EA+ L+ +M G PN TY ++DG C +L M+E ++ PN
Sbjct: 198 VVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYN 257
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+++ G+++ A L I E+E + N ++ + S+A +L++M +R
Sbjct: 258 TIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLER 317
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
P+ TF + V E + D + R + P TY +++ K R ++
Sbjct: 318 KINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNR-LDA 376
Query: 240 DRYLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
++ ++ + S ++ ++N +I +C+ +D ++ EM + + N +T+ TLI
Sbjct: 377 AEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIH 436
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW---- 354
G C+ +++ ++LL ++ G P+ T N+++D LC + +DAL+ M +
Sbjct: 437 GFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDI 496
Query: 355 -------GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
GV P+ TYNILI L G + L+++M I PD T++++I C+
Sbjct: 497 DASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 556
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+++++A + F SM + PD +++ LI K+G D+ + F M Q G D+ T
Sbjct: 557 QSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAIT 616
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERGI 496
++ + + A DI + G+
Sbjct: 617 YITLIYGFRKVDNIDGALDIFQEMISSGV 645
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 179/382 (46%), Gaps = 24/382 (6%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P ++A+I+A VK A + +M P TY+ +I G C+ +D A
Sbjct: 319 INPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAE 378
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ G +P++ T+ LI G+C AKRV + ++L M E + N T +L+HG
Sbjct: 379 HMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGF 438
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ D + A +LL + + CNTLL L +N +A + + M +
Sbjct: 439 CQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM-------QK 491
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
S D +D + GV+P TY +L+ L G+ +E +
Sbjct: 492 SKMD---------IDASRPF--------NGVEPDVQTYNILICGLINEGKFLEAEELYEE 534
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ +V + +Y+ +ID CK + +D AT++ M + +P++VTFNTLI+G+CK
Sbjct: 535 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGM 594
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V EL + + G D T+ ++I + + ALD EM+ GV P+TIT
Sbjct: 595 VDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRN 654
Query: 366 LIRSLCAIGDVARSLRLFQKMQ 387
++ L + ++ R++ + + +Q
Sbjct: 655 MLTGLWSKEELERAVAMLEDLQ 676
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 155/329 (47%), Gaps = 5/329 (1%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A + K+ G+ P TF+ + L ++E LD F + KP T+ LM
Sbjct: 135 ALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEA---LDLF-HQMCKPNVVTFTTLMN 190
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD-RDIA 287
L + GR VE L+ + +D L N +Y ++D CK+ A + R+M + I
Sbjct: 191 GLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHII 250
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
PN+V +NT+I G KD L + + E PD T+N MI+ C + R+ DA
Sbjct: 251 PNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQL 310
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
L EM+E + P+ +T++ LI + G + L+ +M I P T++++I FC+
Sbjct: 311 LQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCK 370
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
N+++ AE F+ T G PD +++ LI ++ R D+ + M + G ++ T
Sbjct: 371 QNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTIT 430
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERGI 496
++ Q G A D+++ G+
Sbjct: 431 YTTLIHGFCQVGDLNAAQDLLQEMISSGV 459
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 128/245 (52%), Gaps = 5/245 (2%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
V ++N ++ C + + A ++ +M PN+VTF TL++G C++ V + LL
Sbjct: 150 TVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALL 205
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG-VPPNTITYNILIRSLCA 372
+LE G +P++ T+ +++D +C+ AL+ L +M E + PN + YN +I L
Sbjct: 206 DRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWK 265
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G + + LF +MQ I PDI T+N +I FC + AE+ ML + PD +
Sbjct: 266 DGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVT 325
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
+SALI A +K G+F EA++ + M P + T + +++ +Q R + A + +
Sbjct: 326 FSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTP 385
Query: 493 ERGIS 497
+G S
Sbjct: 386 TKGCS 390
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 120/286 (41%), Gaps = 32/286 (11%)
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
++ + R + +V + ++ ++ D + ++M + N +F L+ C
Sbjct: 69 FGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCS 128
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD---------------- 346
+++ + + GF P TFN+++ LC R +ALD
Sbjct: 129 CSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKPNVVTFTTL 188
Query: 347 ---------------CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM-QADR 390
L M+E G+ PN ITY ++ +C +GD +L L +KM +
Sbjct: 189 MNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSH 248
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
I P++ +N +I + + A F M + PD +Y+ +I SGR+ +A+
Sbjct: 249 IIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAE 308
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
Q M + NPD T + ++ V++G+F EA ++ R I
Sbjct: 309 QLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSI 354
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P T Y+++ID L K + +D A F M PD T+N LI G C+ G+VD+
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDG 598
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M G + TY LI GF + + + M V P+ T+R+++ G
Sbjct: 599 LELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTG 658
Query: 125 VFRCLDPHKAFELL 138
++ + +A +L
Sbjct: 659 LWSKEELERAVAML 672
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
+DA+D MV P+ I + L+ + +G + L +KM+ R+ + Y+F
Sbjct: 62 LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
L++ FC +K+ A F + LG P +++ L+ L R EA F M
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM---- 177
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
C P+ T ++ L ++GR EA ++ E G+
Sbjct: 178 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGL 213
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 222/490 (45%), Gaps = 38/490 (7%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMS---VDQCKPDRFTYNILIHGICR 57
+S LG +P+ YN ++ N + A M+ V C P+ +YN +I+G
Sbjct: 157 MSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFT 216
Query: 58 IGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
G VD+A L M G PNV TYTI+IDG C A+ V V + M ++ V PN T
Sbjct: 217 EGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVT 276
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
L+HG E +L++M
Sbjct: 277 YTCLIHGYLSI-----------------------------------GQWKEVVRMLKEMS 301
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
G P+ T+ + L E + D+ I++G+KP S Y +++ G
Sbjct: 302 AHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALS 361
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E +L+ + + + N +N+V F K M+ A +I +MR + ++PN+V + TLI
Sbjct: 362 EMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLI 421
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
CK V ++ G P+ F S++ LC ++E A + EMV G+
Sbjct: 422 DALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIH 481
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
PN + +N ++ +LC G V ++ RL M+ PDI ++NALI+ C + K ++A K
Sbjct: 482 PNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKL 541
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
ML++GL+P+ +Y+ L+ + GR D+A F M NG P T N IL L +
Sbjct: 542 LDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFK 601
Query: 478 QGRFEEAHDI 487
RF EA ++
Sbjct: 602 TRRFSEAKEL 611
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 241/492 (48%), Gaps = 6/492 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ YN VI+ +D AY F M+ P+ TY I+I G+C+ VVD A +
Sbjct: 202 PNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGV 261
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV-- 125
+QM G PN+ TYT LI G+ + + EV R+L+ M + P+ T L+ +
Sbjct: 262 FQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCK 321
Query: 126 -FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+C + K F+ +IR + ++ + +L+ + SE + L M G P
Sbjct: 322 KGKCTEARKLFDSMIRKGIKPDVS---IYGIILHGYATKGALSEMHSFLDLMVGNGISPN 378
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F+ + E I + ++G+ P Y L++AL K GR + + N
Sbjct: 379 HYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFN 438
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + N+ + ++ C ++ ++A E+ EM ++ I PN+V FNT++ C +
Sbjct: 439 QMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEG 498
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V K + L+ ++ G +PD ++N++I C + ++A L M+ G+ PN TYN
Sbjct: 499 RVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYN 558
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ C G + + +FQ+M ++ I+P + T+N ++ + + +A++ + +M+T
Sbjct: 559 TLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITS 618
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G + ++Y+ ++ L K+ DEA + F S+ D T N+++ L++ GR E+A
Sbjct: 619 GKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDA 678
Query: 485 HDIVKTSKERGI 496
++ T G+
Sbjct: 679 MNLFATISANGL 690
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/531 (25%), Positives = 231/531 (43%), Gaps = 35/531 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ Y VID L K+ +D A FQQM +P+ TY LIHG IG E
Sbjct: 234 GIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEV 293
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+R++K+M G P+ +TY +L+D C + E ++ + M + + P+ + ++HG
Sbjct: 294 VRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHG 353
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ L + + N + + +M EA I KM +G P
Sbjct: 354 YATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPN 413
Query: 185 SSTFDYTV-------------------------------TCLVTGL---DLNETCG-ILD 209
+ + T LV GL D E G +
Sbjct: 414 VVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFF 473
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+ +G+ P + +M L GR ++ R ++ + + ++ SYN +I C V
Sbjct: 474 EMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVG 533
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
D A+++ M + PN T+NTL+ G+C+D + + +L G P T+N
Sbjct: 534 KTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYN 593
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+++ L + RF +A + M+ G + TYNI++ L V +L++FQ + +
Sbjct: 594 TILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSK 653
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ DI TFN +I + + + E A F ++ GL PD +Y + + LI+ G +E
Sbjct: 654 DLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEF 713
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
F ME++GC P+S N ++ L+ +G A + E+ S ++
Sbjct: 714 DGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEA 764
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 212/455 (46%), Gaps = 12/455 (2%)
Query: 51 LIHGICRIGVVDEALR-LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE- 108
L+ G+C V EA+ L+++M LG PNV +Y L+ GFC+ R E +L +M +
Sbjct: 136 LLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADG 195
Query: 109 --RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
R+ PN + ++++G F KA+ L + ++ + ++ L +
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVV 255
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFST 222
A + ++M D+G P T+ TCL+ G E +L G++P T
Sbjct: 256 DRAEGVFQQMIDKGVRPNIVTY----TCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFT 311
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y LL++ L K G+ E + + + + + +V+ Y +++ + + M
Sbjct: 312 YGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMV 371
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
I+PN FN + K A + + ++ + + G P+ + ++ID LC+ R +
Sbjct: 372 GNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVD 431
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
DA ++M+ GV PN + + L+ LC I ++ LF +M I P++ FN ++
Sbjct: 432 DAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIM 491
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+ C ++ KA++ M +G RPD SY+ALI+ G+ DEA + M G
Sbjct: 492 CNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLK 551
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
P+ T N +L + GR ++A+ + + GI+
Sbjct: 552 PNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGIT 586
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/473 (22%), Positives = 211/473 (44%), Gaps = 2/473 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P Y ++D L K A F M KPD Y I++HG G
Sbjct: 300 MSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGA 359
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ E + M G G +PN Y + I+ F + E + M+++ + PN +
Sbjct: 360 LSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYAT 419
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDR 179
L+ + + A EL M E + +V T L+Y L +A + +M ++
Sbjct: 420 LIDALCKLGRVDDA-ELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQ 478
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G P F+ + L T + + ++D + G +P +Y L+ G+ E
Sbjct: 479 GIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEA 538
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ L+ + L N +YN ++ +C+ +D A + +EM I P +VT+NT++ G
Sbjct: 539 SKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHG 598
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
K + +EL + ++ G + +T+N +++ L + + ++AL + + +
Sbjct: 599 LFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVD 658
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
IT+NI+I +L G ++ LF + A+ + PD+ T+ + ++ +E+ + F
Sbjct: 659 IITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFS 718
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
M G P++ + L++ L+ G A +++ + ++ T+++++
Sbjct: 719 EMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLI 771
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 176/405 (43%), Gaps = 4/405 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP+ ++N V A K I A F +M P+ Y LI +C++G VD+A
Sbjct: 374 GISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDA 433
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
QM G APN+ +T L+ G C + + + M + + PN +++
Sbjct: 434 ELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCN 493
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ KA + LI MER ++ N L+ EA+ +L M G P
Sbjct: 494 LCTEGRVMKA-QRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKP 552
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG-DRY 242
T++ + +++ + + G+ P TY ++ L+K R E + Y
Sbjct: 553 NECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELY 612
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
LN + + S + +YN++++ K N +D A ++ + + +D+ +++TFN +I K
Sbjct: 613 LNMITSGKQWS-IYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLK 671
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
D L + G PD T+ + + L E+ SEM + G PN++
Sbjct: 672 DGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLM 731
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
N L+R L GD++R+ K+ S + T + LI F R
Sbjct: 732 LNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSR 776
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS------LRLFQKMQAD---RIS 392
+DAL E + P + I +N L+ ++ + S + F +M D +++
Sbjct: 32 DDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSCFNRMIRDCCSKVA 91
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL-RPDNFSYSALIKALIKSGRFDEAKQ 451
PD++T++ L+ FCRM ++E AF +L G D + L+K L + R EA
Sbjct: 92 PDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMG 151
Query: 452 TFL-SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
L M + GC P+ + N +L+ + R EEA +++
Sbjct: 152 VLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELL 189
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/492 (26%), Positives = 250/492 (50%), Gaps = 10/492 (2%)
Query: 13 YNAVIDALVKSN------SIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+N ++ +LVKSN +I L+ +++ PD FT+NILI+ C + ++ A
Sbjct: 69 FNKILGSLVKSNNNHYPTAISLS----RRLEFHGITPDIFTFNILINCYCHMAEMNFAFS 124
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++ ++ +GY P+ T+ LI G C +V E + + ++ + +L++G+
Sbjct: 125 MMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLC 184
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + A ++L + + ++ NT++ L + + +A + +M + P+
Sbjct: 185 KIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVV 244
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
TF + L E G+ + + + P + T+ +L++AL K G L +
Sbjct: 245 TFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVM 304
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K+ ++ NV +Y+ ++D +C VN +++A + + APN ++ T+I+G CK V
Sbjct: 305 MKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMV 364
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ L + G PDK T+NS+ID LC++ R A + + EM + G P N TYN L
Sbjct: 365 DEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCL 424
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I +LC V +++ L +K++ I PD+YTFN LI C++ +++ A+ F +L+ G
Sbjct: 425 IDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGY 484
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+ ++Y+ ++ L K G FDEA+ M+ NG PD+ T +++ L + E+A
Sbjct: 485 SVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEK 544
Query: 487 IVKTSKERGISF 498
+++ R + +
Sbjct: 545 LLREMIARDVVY 556
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/456 (26%), Positives = 218/456 (47%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F GI+P +N +I+ ++ A+ ++ +PD T+N LI G+C G
Sbjct: 94 LEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGK 153
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V EAL + LG+ + ++Y LI+G C ++L + + V N +
Sbjct: 154 VKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNT 213
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ + + A+EL + + ++ + + L+Y EA + R+M +
Sbjct: 214 IIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKN 273
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ TF+ V L +L +L +K GV P TY LM+ + +
Sbjct: 274 INPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAK 333
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
LN + + N +SY +I+ FCK+ M+D A + +M+ + IAP+ VT+N+LI G
Sbjct: 334 HVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGL 393
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK + EL+ + + G + FT+N +ID LC+ H + A+ + ++ + G+ P+
Sbjct: 394 CKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDM 453
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
T+NILI LC +G + + +FQ + + S + +T+N ++ C+ ++AE
Sbjct: 454 YTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSK 513
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
M G+ PD +Y LI+AL ++A++ M
Sbjct: 514 MDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREM 549
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 182/377 (48%), Gaps = 35/377 (9%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
+YN +ID+L K + AY + QM + PD T++ LI+G C +G ++EA L ++M
Sbjct: 210 MYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREM 269
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
P+ YT+ IL+D C + +L +M + V PN T SL+ G
Sbjct: 270 VLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDG------- 322
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
Y L N ++A +L + G P + ++
Sbjct: 323 --------------------------YCLVNQ--VNKAKHVLNTISQMGAAPNAHSYCTM 354
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ ++E + + +G+ P TY L++ L K+GR ++ + +
Sbjct: 355 INGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQ 414
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+N+ +YN +ID CK + +D+A + ++++D+ I P++ TFN LI G CK + ++
Sbjct: 415 PANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQD 474
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
+ LL G+ + +T+N M++ LC+ F++A LS+M + G+ P+ +TY LI++L
Sbjct: 475 VFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALF 534
Query: 372 AIGDVARSLRLFQKMQA 388
+ ++ +L ++M A
Sbjct: 535 HKDENEKAEKLLREMIA 551
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 197/438 (44%), Gaps = 35/438 (7%)
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L +++E G P+++T+ ILI+ +C+ M E N
Sbjct: 87 AISLSRRLEFHGITPDIFTFNILINCYCH-------------MAEMNF------------ 121
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
AF ++ + ++ + NTL+ L N EA + G+
Sbjct: 122 ----------AFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHL 171
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + L + +L + VK Y ++++L K ++
Sbjct: 172 DQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELY 231
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + ++ +V +++ +I FC V ++ A + REM ++I P+ TFN L+ CK+
Sbjct: 232 SQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKE 291
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + +LV++++ G P+ T++S++D C ++ A L+ + + G PN +Y
Sbjct: 292 GNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSY 351
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+I C I V +L LF MQ I+PD T+N+LI C+ +I A + M
Sbjct: 352 CTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHD 411
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G + F+Y+ LI AL K+ D+A ++ G PD YT N+++ L + GR +
Sbjct: 412 NGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKN 471
Query: 484 AHDIVKTSKERGISFKSF 501
A D+ + +G S ++
Sbjct: 472 AQDVFQDLLSKGYSVNAW 489
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 115/258 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y++++D N ++ A +S P+ +Y +I+G C+I +VDEA
Sbjct: 308 GVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEA 367
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L M+ G AP+ TY LIDG C + R++ + +++ M + N T L+
Sbjct: 368 LSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDA 427
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A L+ + ++ N L+Y L A + + + +GY
Sbjct: 428 LCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVN 487
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ V L +E +L G+ P TY L++AL+ + + ++ L
Sbjct: 488 AWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLR 547
Query: 245 HVFKDRLVSNVNSYNMVI 262
+ +V + MV+
Sbjct: 548 EMIARDVVYALEGLEMVL 565
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/521 (25%), Positives = 239/521 (45%), Gaps = 39/521 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P+ Y+ +I + ++ + F + + D N L+ G+C V EA+
Sbjct: 86 VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAM 145
Query: 66 R-LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE---RNVCPNEATVRSL 121
L+++M LG P+ +YTIL+ G CN KR E +L +M + R PN + +
Sbjct: 146 DVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIV 205
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++G F K + L + ++R + T++ L + A + ++M D G+
Sbjct: 206 INGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGF 265
Query: 182 LPESSTFDYTV--------------------------TCLVTGLDLNETCG--------- 206
P + T++ + C G LN C
Sbjct: 266 KPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARF 325
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
D+ I++G+KP+ STY +L+ G E +L+ + ++ L + + +N+ +
Sbjct: 326 FFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYA 385
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K M+D+A +I +MR ++PN+V + LI CK V ++ G P+
Sbjct: 386 KCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIV 445
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
FNS++ LC ++E A + + EM++ G+ PN + +N LI +LC +G V RL M
Sbjct: 446 VFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLM 505
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ + PD +++ LI +C + ++AEK F M+++GL P +Y+ L+ + R
Sbjct: 506 EHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRI 565
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
D+A F M + G P T N IL L Q RF EA ++
Sbjct: 566 DDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKEL 606
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 232/531 (43%), Gaps = 70/531 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P Y VID L K+ D A FQQM + KP+ +TYN LIHG IG E
Sbjct: 229 GIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEV 288
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++++++M G P+ YTY L++ C R E + M + + P +T L+HG
Sbjct: 289 VQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHG 348
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ SE + L M + G P+
Sbjct: 349 Y-----------------------------------ATKGALSEMHSFLDLMVENGLSPD 373
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F+ + +++ I + + G+ P Y L++AL K GR + + N
Sbjct: 374 HHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFN 433
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + N+ +N ++ C V+ +RA E+ EM D+ I PN V FNTLI C
Sbjct: 434 QMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVG 493
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V + R L+ ++ G +PD F++ +I C R ++A MV G+ P +TYN
Sbjct: 494 RVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYN 553
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISP------------------------------- 393
L+ C+ + + LF++M ++P
Sbjct: 554 TLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINS 613
Query: 394 ----DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
DIYT+N ++ C+ N +++A K F S+ + GL+ + +++ +I AL+K GR ++A
Sbjct: 614 GTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDA 673
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
F ++ NG P+ T L+ E L+++G EE + ++ G + S
Sbjct: 674 MDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNS 724
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 137/498 (27%), Positives = 223/498 (44%), Gaps = 3/498 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ---CKPDRFTYNILIHGICRIGV 60
LG P T Y ++ L + A M+ D C P+ +Y+I+I+G G
Sbjct: 155 LGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQ 214
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD+ L +M G P+V TYT +IDG C A+ V + M + PN T
Sbjct: 215 VDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNC 274
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+HG + ++L R +LL L N EA M +G
Sbjct: 275 LIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKG 334
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ ST+ + T L+E LD ++ G+ P + + A K G +
Sbjct: 335 IKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAM 394
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
N + + L NV +Y +ID CK+ +D A +M + + PN+V FN+L+ G
Sbjct: 395 DIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGL 454
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C + + EL+ +L+ G P+ FN++I LC R + + M GV P+
Sbjct: 455 CTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDA 514
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+Y LI C G + ++F M + +SP T+N L+ +C ++I+ A F
Sbjct: 515 FSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFRE 574
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
ML G+ P +Y+ ++ L ++ RF EAK+ +L+M +G D YT N+IL L +
Sbjct: 575 MLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNC 634
Query: 481 FEEAHDIVKTSKERGISF 498
+EA + ++ +G+
Sbjct: 635 VDEAFKMFQSLCSKGLQL 652
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 109/503 (21%), Positives = 208/503 (41%), Gaps = 45/503 (8%)
Query: 9 STRLYNAVIDALVK---SNSIDLAYLKFQQM---SVDQCKPDRFTYNILIHGICRIGVVD 62
S R +N ++ A+ + S++ +LA F +M D+ P+ TY+ILI CR+G ++
Sbjct: 48 SVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLE 107
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL-EIMKERNVCPNEATVRSL 121
+ G+ + L+ G C+ KRV E VL + M E P+ + L
Sbjct: 108 HGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTIL 167
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD--- 178
+ G L N A EA +L M D
Sbjct: 168 LKG-----------------------------------LCNEKRAEEALELLHMMADDHG 192
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
R P ++ + T +++ + I RG+ P TY +++ L KA
Sbjct: 193 RRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDR 252
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + N +YN +I + + ++ EM R + P+ T+ +L++
Sbjct: 253 AEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLN 312
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
CK+ + R ++ G KP T+ +I + L MVE G+ P
Sbjct: 313 YLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSP 372
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ +NI + G + +++ +F KM+ +SP++ + ALI + C++ +++ AE F
Sbjct: 373 DHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKF 432
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M+ G+ P+ +++L+ L +++ A++ M G P++ N ++ L
Sbjct: 433 NQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNV 492
Query: 479 GRFEEAHDIVKTSKERGISFKSF 501
GR E ++ + G+ +F
Sbjct: 493 GRVMEGRRLIDLMEHVGVRPDAF 515
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 174/404 (43%), Gaps = 41/404 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP+ Y A+IDAL K +D A +KF QM + P+ +N L++G+C + + A
Sbjct: 404 GLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERA 463
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LV +M G PN + LI CN RV E R++++M+ V P+ + L+ G
Sbjct: 464 EELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISG 523
Query: 125 ---VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
R + K F+ ++ + P ++ NTLL+ + S +A + R+M
Sbjct: 524 YCLTGRTDEAEKVFDGMVS-IGLSP--TEVTYNTLLHGYCSASRIDDAYCLFREM----- 575
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+++GV P TY ++ L++ R E
Sbjct: 576 ------------------------------LRKGVTPGVVTYNTILHGLFQTKRFSEAKE 605
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
++ ++ +YN++++ CK N +D A ++ + + + + N++TF +I
Sbjct: 606 LYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALL 665
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K +L + G P+ T+ + + L E+ S M + G PN+
Sbjct: 666 KGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQ 725
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
N L+R L GD++R+ K+ S + T + L+ F
Sbjct: 726 MLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIF 769
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 130/324 (40%), Gaps = 10/324 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ +N +I L + M +PD F+Y LI G C G DEA
Sbjct: 474 GICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEA 533
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ M +G +P TY L+ G+C+A R+ + + + M + V P T +++HG
Sbjct: 534 EKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHG 593
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F+ +A EL + + N +L L ++ EA + + + +G
Sbjct: 594 LFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLN 653
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + L+ G + + G+ P TY L+ E L + G E D +
Sbjct: 654 IITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFS 713
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K+ N N ++ + RA ++ +R+ + T + L+S D
Sbjct: 714 AMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDE 773
Query: 305 EVHKTRELLVMLLECGFKPDKFTF 328
H + L P+K+ F
Sbjct: 774 YQHHAKSL----------PEKYHF 787
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 9/160 (5%)
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILI----RSLCAIGDVARSLRLFQKMQ---AD 389
R+ +DAL E++ P + +N L+ R+ C+ ++ F +M +D
Sbjct: 26 RSLGLDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSAS-ELAVSHFNRMVRECSD 84
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+++P++ T++ LI FCRM +E AF +L G R D+ + + L+K L R EA
Sbjct: 85 KVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEA 144
Query: 450 KQTFLS-MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
L M + GC PD+ + ++L+ L + R EEA +++
Sbjct: 145 MDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELL 184
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/471 (28%), Positives = 241/471 (51%), Gaps = 2/471 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + + ++ K QM + + ++ NILI+ +CR+ V A+ +
Sbjct: 90 PSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISV 149
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LG P+ T+ LI+G C + E + M R P+ + ++++G+ +
Sbjct: 150 LGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCK 209
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A +LL R ME + LV T++ L +++ ++A +L +M DRG P+
Sbjct: 210 SGNTSMALQLL-RKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVV 268
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + + LNE + + + R V P T+ +L++ L K G E +
Sbjct: 269 TYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAM 328
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K N +YN ++D +C N MD A ++ M D+ AP + ++N LI+G+CK +
Sbjct: 329 TKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRL 388
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ + LLV + E PD T+++++ LC+ R ++AL+ EM G+ P+ +TY+ L
Sbjct: 389 DEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTL 448
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ LC G + +L+L + MQ +I PDI +N LI+ K+E A++ F + G+
Sbjct: 449 LDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGI 508
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
+P +Y+ +IK L+K G DEA + F ME +G P+S + N+I++ +Q
Sbjct: 509 QPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQ 559
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 230/475 (48%), Gaps = 4/475 (0%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYT 82
S SID A F +M +P + + I + + L QM+ G NVY+
Sbjct: 70 SISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYS 129
Query: 83 YTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH--KAFELLIR 140
ILI+ C V VL M + + P+ T +L++G RC++ +A L
Sbjct: 130 LNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLING--RCIEGEIKEAVGLFNE 187
Query: 141 FMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLD 200
+ R + +T++ L + S A +LRKM ++G P + + L
Sbjct: 188 MVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTL 247
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
+N+ +L + RG+ P TY ++ G E N + ++ N ++ +
Sbjct: 248 VNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTI 307
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
++D CK M+ A + M + PN T+N L+ G+C + ++ + +++L ++++ G
Sbjct: 308 LVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKG 367
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
P ++N +I+ C+ R ++A L EM E + P+T+TY+ L++ LC +G +L
Sbjct: 368 CAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEAL 427
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
LF++M + + PD+ T++ L+ C+ +++A K SM + PD Y+ LI+ +
Sbjct: 428 NLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGM 487
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+G+ + AK+ F + +G P T ++++ L+++G +EA+++ + ++ G
Sbjct: 488 FIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDG 542
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 229/473 (48%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ G++ + N +I+ L + N + A +M +PD T+N LI+G C G
Sbjct: 118 MDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGE 177
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ EA+ L +M G+ P+V +Y+ +I+G C + + ++L M+E+ PN +
Sbjct: 178 IKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTT 237
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ + + + A +LL ++R + +T+L+ + +EA + +M R
Sbjct: 238 IIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRN 297
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P + TF V L ++E + + K+G +P TY LM+ + E
Sbjct: 298 VMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQ 357
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L+ + V+SYN++I+ +CK +D A + EM ++++ P+ VT++TL+ G
Sbjct: 358 KVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGL 417
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ + L + G PD T+++++D LC+ ++AL L M E + P+
Sbjct: 418 CQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDI 477
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ YNILI + G + + LF K+ AD I P I T+ +I+ + ++A + F
Sbjct: 478 VLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRK 537
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
M G P++ SY+ +I+ +++ A + M + DS T ++L+
Sbjct: 538 MEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 146/290 (50%)
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+L K G++P T+ L+ G E N + + +V SY+ VI+ C
Sbjct: 149 VLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLC 208
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K A ++ R+M ++ PNLV + T+I CKD V+ +LL +++ G PD
Sbjct: 209 KSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVV 268
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+++++ C +A +EMV V PNT+T+ IL+ LC G V+ + +F+ M
Sbjct: 269 TYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAM 328
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
P+ YT+NAL+ +C N++++A+K M+ G P SY+ LI K R
Sbjct: 329 TKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRL 388
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
DEAK + M + PD+ T + +++ L Q GR +EA ++ K G+
Sbjct: 389 DEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGL 438
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 162/328 (49%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A ++L KM G P++ TF+ + ++ E G+ + ++RG +P +Y ++
Sbjct: 146 AISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVIN 205
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
L K+G + L + + N+ +Y +ID CK +++ A ++ EM DR I P
Sbjct: 206 GLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPP 265
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
++VT++T++ G C +++ L ++ P+ TF ++D LC+ +A
Sbjct: 266 DVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVF 325
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
M + G PN TYN L+ C + + ++ M +P ++++N LI +C+
Sbjct: 326 EAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKR 385
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
++++A+ M L PD +YS L++ L + GR EA F M +G PD T
Sbjct: 386 RRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTY 445
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGI 496
+ +L+ L + G +EA ++K+ +E I
Sbjct: 446 STLLDGLCKHGHLDEALKLLKSMQESKI 473
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 148/293 (50%), Gaps = 3/293 (1%)
Query: 205 CGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
C +D F GV + +L+ L + V L +FK + + ++N +I+
Sbjct: 115 CNQMDLF---GVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLING 171
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
C + A + EM R P++++++T+I+G CK +LL + E G KP+
Sbjct: 172 RCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPN 231
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
+ ++ID LC+ DA+D LSEMV+ G+PP+ +TY+ ++ C++G + + LF
Sbjct: 232 LVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFN 291
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+M + P+ TF L+ C+ + +A F +M G P+ ++Y+AL+ +
Sbjct: 292 EMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNN 351
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ DEA++ M GC P ++ N+++ ++ R +EA ++ E+ ++
Sbjct: 352 QMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELT 404
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 147/332 (44%), Gaps = 35/332 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+T + ++D L K + A F+ M+ +P+ +TYN L+ G C +DEA
Sbjct: 298 VMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQ 357
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+++ M G AP V++Y ILI+G+C +R+ E +L M E+ + P+ T +L+ G+
Sbjct: 358 KVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGL 417
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ P +A L ++M G LP+
Sbjct: 418 CQVGRPQEALNL-----------------------------------FKEMCSSGLLPDL 442
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + L L+E +L + + ++P Y +L+E ++ AG+ +
Sbjct: 443 MTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSK 502
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+F D + + +Y ++I K + D A E+ R+M D PN ++N +I G ++ +
Sbjct: 503 LFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQD 562
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
L+ ++ F D TF ++D R
Sbjct: 563 SSTAIRLIDEMVGKRFSADSSTFQMLLDLESR 594
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/547 (26%), Positives = 250/547 (45%), Gaps = 57/547 (10%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRI--------- 58
P+ YN VI+ L K +D AY F +M P+ TYN +I G+C+
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAV 196
Query: 59 -------GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNV 111
G ++EA+RL+K+M G G P+V TY++LID +C R E + + M R
Sbjct: 197 LQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQ 256
Query: 112 CPNEATVRSLVHGVFR---CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE 168
P+ T R+L+HG +D H L+I+ + PL + V N L+ + N +
Sbjct: 257 NPDAYTYRTLLHGYATKGALVDMHDLLALMIQ--DGIPL-EDHVFNILIRAYAKNETLDK 313
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A +M +G+ P T+ + L + + + G+ P T+ L+
Sbjct: 314 AMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIH 373
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
L G + ++ + + N N ++D CK + A + ++ + P
Sbjct: 374 GLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKP 433
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
++V++ LI G+C D ++ ++ +LL ++ G +PD T++++++ C+ R +DAL
Sbjct: 434 DVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALY 493
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVA------------------------------- 377
EM V PN ITYNI++ L G V
Sbjct: 494 REMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCEN 553
Query: 378 ----RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
+LR+FQ +++ ++ TFN +I ++ +I A+ F ++L GL PD Y
Sbjct: 554 SFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIY 613
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+I++ I+ G +E+ + FLSME+NGC +S T N I+ L+++G A + E
Sbjct: 614 GLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDE 673
Query: 494 RGISFKS 500
+ S ++
Sbjct: 674 KEYSVEA 680
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/474 (27%), Positives = 210/474 (44%), Gaps = 29/474 (6%)
Query: 35 QMSVDQCKPDRFTYNILIHGICRIGVVDEALR--------LVKQMEGLGY--APNVYTYT 84
Q+ V++ D T+ ILI C +G++D AL V M GY PNV +Y
Sbjct: 84 QVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYN 143
Query: 85 ILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMER 144
++I+G V + + + M + PN T S++ G+ + KA +L + ++
Sbjct: 144 MVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDK 203
Query: 145 EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNET 204
L EA +L+KM G P+ T+ + E
Sbjct: 204 GQL-------------------EEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEA 244
Query: 205 CGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
I D+ ++RG P TY L+ G V+ L + +D + + +N++I
Sbjct: 245 RNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRA 304
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
+ K +D+A EMR + +PN+VT+ T+I CK V ++ G PD
Sbjct: 305 YAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPD 364
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
TF S+I LC ++ EM+ G+ PN I N ++ SLC G V + F
Sbjct: 365 IITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFD 424
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
++ + PD+ ++ LI +C K++++ K M+++GLRPDN +YSAL+ K+G
Sbjct: 425 QIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNG 484
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
R D+A + M P++ T N+IL L GR A + + GI
Sbjct: 485 RVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQL 538
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 175/401 (43%), Gaps = 6/401 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI ++N +I A K+ ++D A F +M P+ TY +I +C+ G V++A
Sbjct: 290 GIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDA 349
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ QM G +P++ T+T LI G C +V ++ M R + PN + +++
Sbjct: 350 VSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDS 409
Query: 125 V---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ R L+ H F+ +I + + + L+ + E+ +L +M G
Sbjct: 410 LCKEGRVLEAHDFFDQIIHVGVKPDVVSYTI---LIDGYCLDGKMDESIKLLGRMVSIGL 466
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P++ T+ + +++ + + VKP TY +++ L+ AGR V
Sbjct: 467 RPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAARE 526
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + + +N+YN+V+ C+ + +D A + + +R ++ + TFN +I G
Sbjct: 527 FYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLL 586
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + + L +L G PD + MI E++ + M + G N+
Sbjct: 587 KVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSR 646
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
T N ++R L GDV R+ K+ S + T LI
Sbjct: 647 TLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEASTAVLLI 687
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 118/298 (39%), Gaps = 35/298 (11%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I +G+ P Y +ID +D + +M +PD TY+ L++G C+ G
Sbjct: 426 IIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGR 485
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD+AL L ++M PN TY I++ G +A RV V E ++
Sbjct: 486 VDDALALYREMFSKDVKPNAITYNIILHGLFHAGRV--------------VAAREFYMKI 531
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ G+ ++ + N +L L NS EA + + + +
Sbjct: 532 VDSGIQLGINTY---------------------NIVLGGLCENSFVDEALRMFQGLRSKE 570
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ E TF+ + L+ + + + + G+ P Y L++++ + G E D
Sbjct: 571 FQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESD 630
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ K+ +N + N ++ + + RA ++ +++ + T LIS
Sbjct: 631 ELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEASTAVLLIS 688
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 141/530 (26%), Positives = 242/530 (45%), Gaps = 34/530 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP +YN VI L K + A F +M + P+R TYN LI G C++G ++EA
Sbjct: 212 GVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEA 271
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++M+ P + T+ L++G C A+ + E RVLE M+ P+ T +L G
Sbjct: 272 FNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDG 331
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+C + + L + + C+ LL L +A +L+K + G P
Sbjct: 332 HLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPV 391
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F+ V D+N+ ++ G++P TY L++ + E ++ +
Sbjct: 392 GVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIK 451
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++ NV +YN +ID + + + DR +I EM + + PN++++ LI+ CKDA
Sbjct: 452 KMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDA 511
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + +L ++ G P+ +N +ID C A + +DA EMV + P +TYN
Sbjct: 512 NILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYN 571
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA---------- 414
ILI LC G V + L ++ +S D+ T+N+LI + ++KA
Sbjct: 572 ILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKS 631
Query: 415 ------------------------EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
EK + ML + L PD Y+ALI ++ G +A
Sbjct: 632 GIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKAC 691
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+ME G PD T N ++ ++GR + ++V K RG+ K+
Sbjct: 692 SLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKT 741
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 132/517 (25%), Positives = 238/517 (46%), Gaps = 49/517 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS N +++LV + + F ++ +PD+F Y I ++G + A
Sbjct: 142 GVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRA 201
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ M+ G +P V+ Y ++I G C KR+ + ++ + M +R V PN T +L+ G
Sbjct: 202 IELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDG 261
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +AF + R + N+LL L M EA +L +M G++P+
Sbjct: 262 YCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPD 321
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFI-------KRGVKPRFSTYLLLMEALYKAGRDV 237
F YT T D + CG +D I ++GV+ T +L+ AL K G
Sbjct: 322 R--FTYT-----TLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNME 374
Query: 238 EGDRYLNHVFKDRL----------------VSNVN-------------------SYNMVI 262
+ + L ++ L V ++N +YN ++
Sbjct: 375 KAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLV 434
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
FC++ M+ A + ++M ++ + PN+ T+NTLI G+ + + ++L + + G K
Sbjct: 435 KKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLK 494
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P+ ++ +I+CLC+ +A L +MV GV PN YN+LI C G + + R
Sbjct: 495 PNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRF 554
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
F +M A I P + T+N LI C+ K+ +AE + GL D +Y++LI
Sbjct: 555 FDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSS 614
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+G +A + + +M+++G P T + ++ ++G
Sbjct: 615 AGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEG 651
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/532 (25%), Positives = 235/532 (44%), Gaps = 46/532 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P+ YN +ID K ++ A+ ++M V+ +P T+N L++G+CR +++EA
Sbjct: 248 VAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQ 307
Query: 66 RLVKQMEGLGYAPNVYTYTILIDG-----------------------------------F 90
R++++ME G+ P+ +TYT L DG
Sbjct: 308 RVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNAL 367
Query: 91 CNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQK 150
C + + VL+ E + P ++V+G + D +KA+ + +
Sbjct: 368 CKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNH 427
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD-----YTVTCLVTGLDLNETC 205
+ N+L+ + EA ++KM ++G LP T++ Y +CL +
Sbjct: 428 VTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCL-----FDRCF 482
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
IL+ K+G+KP +Y L+ L K +E + L + +V N YNM+ID
Sbjct: 483 QILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGS 542
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C + A EM R+I P LVT+N LI+G CK +V + L + G D
Sbjct: 543 CIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDV 602
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T+NS+I A + AL+ M + G+ P TY+ LI C + +++Q+
Sbjct: 603 ITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG-CGKEGLVLVEKIYQE 661
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M + PD +NALI + ++KA +M G++PD +Y+ LI K GR
Sbjct: 662 MLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGR 721
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ K M+ G P + T ++++ + F+ A+ + E G +
Sbjct: 722 MHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFT 773
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 169/378 (44%), Gaps = 35/378 (9%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
N L L + + + ++ + G P+ + + V DL ++ +
Sbjct: 151 NLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKR 210
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
GV P Y +++ L K R + ++ + + R+ N +YN +ID +CKV ++
Sbjct: 211 GGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEE 270
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A I M+ ++ P ++TFN+L++G C+ + + + +L + GF PD+FT+ ++ D
Sbjct: 271 AFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFD 330
Query: 334 -----------------------------------CLCRAHRFEDALDCLSEMVEWGVPP 358
LC+ E A + L + +E G+ P
Sbjct: 331 GHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAP 390
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ +N ++ C +GD+ ++ +KM+A + P+ T+N+L++ FC M +E+AEK
Sbjct: 391 VGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCI 450
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M+ G+ P+ +Y+ LI +S FD Q ME+ G P+ + ++ L +
Sbjct: 451 KKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKD 510
Query: 479 GRFEEAHDIVKTSKERGI 496
EA I+ RG+
Sbjct: 511 ANILEAEVILGDMVHRGV 528
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 122/250 (48%)
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
KD ++ +V S N+ ++ + ++ E+ + + P+ + I K ++
Sbjct: 140 KDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLK 199
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ EL+ + G P F +N +I LC+ R +DA EM++ V PN ITYN LI
Sbjct: 200 RAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLI 259
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
C +G + + + ++M+ + + P I TFN+L+ CR +E+A++ M G
Sbjct: 260 DGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFV 319
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD F+Y+ L +K G D + + G YT +++L L ++G E+A ++
Sbjct: 320 PDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEV 379
Query: 488 VKTSKERGIS 497
+K E G++
Sbjct: 380 LKKFLENGLA 389
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 164/367 (44%), Gaps = 1/367 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ YN+++ + +++ A ++M P+ TYN LI G R + D
Sbjct: 421 VGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDR 480
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+++++ME G PNV +Y LI+ C + E +L M R V PN L+
Sbjct: 481 CFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLID 540
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G AF + RE + + N L+ L EA + ++ +G
Sbjct: 541 GSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSF 600
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ ++ + ++ + + +T K G+KP +TY L+ K G V ++
Sbjct: 601 DVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGL-VLVEKIY 659
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + LV + YN +I C+ + + +A + M + I P+ +T+N LI GH K+
Sbjct: 660 QEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKE 719
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+HK + L+ + G P T++ +I C+ F+ A EM E G P+
Sbjct: 720 GRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSIC 779
Query: 364 NILIRSL 370
+ LI L
Sbjct: 780 DNLITGL 786
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/486 (26%), Positives = 239/486 (49%), Gaps = 1/486 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P Y A+I+ VK + I A+ ++M + K + FTY LIHG+C+IG +++
Sbjct: 331 MGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEK 390
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L +M +G P++ TY LI+G+ + + + + +L +K+ N+ N ++V+
Sbjct: 391 AEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVN 450
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ C D +A EL + ++ T++ L EA IL M D+G P
Sbjct: 451 GLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSP 510
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + + E L I +G+KP TY + +AG +R
Sbjct: 511 DVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSF 570
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + N +ID +CK +A R M D+ + P++ T + LI G K+
Sbjct: 571 IEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKN 630
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + + LL+ G PD FT+ S+I LC+ + A + +M + G+ PN +TY
Sbjct: 631 GKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTY 690
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI LC +G++A++ LF + ++ + T++ +I +C+ + +A + F M
Sbjct: 691 NALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKL 750
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+G+ PD+F Y ALI K+G ++A FL M + G + N +++ + G+ E
Sbjct: 751 VGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIE 809
Query: 484 AHDIVK 489
A+ +V+
Sbjct: 810 AYQLVE 815
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 155/562 (27%), Positives = 233/562 (41%), Gaps = 70/562 (12%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P Y +I+A + ++ M C P+ TY+++I G+CR G VDEAL
Sbjct: 228 IVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEAL 287
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE--------------------------- 98
L + M G P+ Y Y LIDGFC KR E
Sbjct: 288 ELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGF 347
Query: 99 --------VFRVLEIMKERNVCPNEATVRSLVHGV------------------------- 125
F+V E M R + N T +L+HG+
Sbjct: 348 VKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDI 407
Query: 126 --FRCL--------DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
+ CL + KA+ELLI + +C ++ L + + A + ++
Sbjct: 408 QTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQE 467
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
M G P + V LV E IL +G+ P Y ++ KAG+
Sbjct: 468 MISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGK 527
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
EG YL + L NV +Y I +C+ M A EM D IAPN V
Sbjct: 528 MEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTD 587
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
LI G+CKD K +L+ G PD T + +I L + + ++A+ SE+++ G
Sbjct: 588 LIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKG 647
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ P+ TY LI +LC GD+ + L M I+P+I T+NALI C++ +I KA
Sbjct: 648 LVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAR 707
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ F + GL ++ +YS +I KS EA Q F M+ G PDS+ +++
Sbjct: 708 ELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGC 767
Query: 476 VQQGRFEEAHDIVKTSKERGIS 497
+ G E+A + E GI+
Sbjct: 768 CKAGNTEKALSLFLGMVEEGIA 789
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 226/491 (46%), Gaps = 1/491 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ +Y ++ LVK + A M PD F YN +I G C+ G ++E
Sbjct: 472 GLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEG 531
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G PNVYTY I G+C A + R M + + PN+ L+ G
Sbjct: 532 KSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDG 591
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + KAF +++ L + L++ LS N EA + ++ D+G +P+
Sbjct: 592 YCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPD 651
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ ++ L DL + D K+G+ P TY L+ L K G + +
Sbjct: 652 VFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFD 711
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L N +Y+ +I +CK + A ++ M+ + P+ + LI G CK
Sbjct: 712 GIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAG 771
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
K L + ++E G FN++ID + + +A + +MV+ + PN +TY
Sbjct: 772 NTEKALSLFLGMVEEGIASTP-AFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYT 830
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
ILI C +G++ + +LF +MQ + P++ T+ +L+ + R+ + + F M+
Sbjct: 831 ILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVAR 890
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G++PD+ ++S ++ A +K G + +A + M G N ++++ L + E
Sbjct: 891 GIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEV 950
Query: 485 HDIVKTSKERG 495
++ +++G
Sbjct: 951 LKVLDEVEKQG 961
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 132/532 (24%), Positives = 246/532 (46%), Gaps = 36/532 (6%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAY-----LK----------------------- 32
++ +GI P + YN +I+ K +++ AY +K
Sbjct: 398 MTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGD 457
Query: 33 -------FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTI 85
FQ+M KP+ Y ++ G+ + G +EA++++ M+ G +P+V+ Y
Sbjct: 458 LTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNT 517
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
+I GFC A ++ E L M + + PN T + +HG R + A I ++
Sbjct: 518 VIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSG 577
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
++C L+ + ++A A R M D+G LP+ T + L L E
Sbjct: 578 IAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAM 637
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
G+ + +G+ P TY L+ L K G + + K + N+ +YN +I+
Sbjct: 638 GVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGL 697
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
CK+ + +A E+ + ++ +A N VT++T+I+G+CK A + + +L + G PD
Sbjct: 698 CKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDS 757
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
F + ++ID C+A E AL MVE G+ +T +N LI +G + + +L +
Sbjct: 758 FVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVED 816
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M + I+P+ T+ LI+ C + I++AE+ F M + P+ +Y++L+ + GR
Sbjct: 817 MVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGR 876
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
E F M G PD +++++ +++G + +A +V G++
Sbjct: 877 RSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVN 928
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 199/420 (47%), Gaps = 5/420 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P+ + +ID K + A+ KF+ M PD T+++LIHG+ + G + EA
Sbjct: 577 GIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEA 636
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + ++ G P+V+TYT LI C + F + + M ++ + PN T +L++G
Sbjct: 637 MGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALING 696
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + KA EL E+ + +T++ ++ +EA + M G P+
Sbjct: 697 LCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPD 756
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK--PRFSTYLLLMEALYKAGRDVEGDRY 242
S + + + + + ++ G+ P F+ L++ +K G+ +E +
Sbjct: 757 SFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNA---LIDGFFKLGKLIEAYQL 813
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + + + N +Y ++I+ C V + A ++ EM+ R++ PN++T+ +L+ G+ +
Sbjct: 814 VEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNR 873
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ L ++ G KPD ++ M+D + + AL + +M+ GV
Sbjct: 874 IGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNL 933
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y ILI +LC +++ L++ +++ + T L+ F R + ++A + SM+
Sbjct: 934 YTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMV 993
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 22/197 (11%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI------------------- 361
F + TF+ + LC + F +A + L M++ P I
Sbjct: 103 FSQNLSTFSILSLILCNSGLFGNAANVLERMIDTRNPHVKILDSIIKCYKEINGSSSSSS 162
Query: 362 --TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+ ILI G + ++ +F + + + N+L + + N++E K +
Sbjct: 163 VVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYK 222
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
ML + PD ++Y+ LI A + G+ +E K ME+ GC P+ T ++++ L + G
Sbjct: 223 GMLG-AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAG 281
Query: 480 RFEEAHDIVKTSKERGI 496
+EA ++ ++ +G+
Sbjct: 282 DVDEALELKRSMANKGL 298
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 239/491 (48%), Gaps = 3/491 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PST +N ++ ++ K+ + QM PD +T NILI+ C + + A +
Sbjct: 67 PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ LG+ P+ T+T LI G C ++ + + + M PN T +L++G+ +
Sbjct: 127 LAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 186
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + A LL R ME+ +V T ++ L + +EA + KM +G P+
Sbjct: 187 VGNTNAAIRLL-RSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIF 245
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L + +L+ I + P + +++AL K G+ E ++ +
Sbjct: 246 TYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMM 305
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ NV +YN ++D C + MD A ++ M APN++++NTLI+G+CK +
Sbjct: 306 IIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRM 365
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
K L + + P+ T+N+++ C R +DA+ EMV G P+ TY IL
Sbjct: 366 DKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRIL 424
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ LC + ++ L + ++ + PDI + +I CR ++E A F ++ + GL
Sbjct: 425 LDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGL 484
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
RP+ +Y+ +I L + G DEA + F+ M+ NGC+PD T N I + L+Q A
Sbjct: 485 RPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQ 544
Query: 487 IVKTSKERGIS 497
+++ RG S
Sbjct: 545 LLQEMLARGFS 555
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/472 (25%), Positives = 217/472 (45%), Gaps = 1/472 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
GI P N +I++ N + A+ ++ +PD T+ LI G+C G + +
Sbjct: 98 FGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGD 157
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L +M G G+ PNV TY LI+G C R+L M++ N P+ S++
Sbjct: 158 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIID 217
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +AF L + + + +L++ L N +L +M + +P
Sbjct: 218 SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP 277
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ F V L + E ++D I RGV+P TY LM+ E +
Sbjct: 278 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVF 337
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + NV SYN +I+ +CK+ MD+AT + EM +++ PN VT+NTL+ C
Sbjct: 338 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHV 396
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ L ++ G PD T+ ++D LC+ ++A+ L + + P+ Y
Sbjct: 397 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 456
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
I+I +C G++ + +F + + + P++ T+ +I CR +++A K F M
Sbjct: 457 TIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDG 516
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G PD +Y+ + + L+++ A Q M G + D T+ L++E L
Sbjct: 517 NGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEML 568
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 160/359 (44%), Gaps = 3/359 (0%)
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
F LD A R + P + N LL ++ ++ +M G P+
Sbjct: 47 FNTLD--DALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDV 104
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T + + L +L +K G +P +T+ L+ L G+ + +
Sbjct: 105 YTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDK 164
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + NV +Y +I+ CKV + A + R M + P++V + ++I CKD +
Sbjct: 165 MIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 224
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V + L ++ G PD FT+ S+I LC ++ L++M+ + P+ + ++
Sbjct: 225 VTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFST 284
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
++ +LC G + + + M + P++ T+NAL+ C +++++A K F +M+ G
Sbjct: 285 VVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNG 344
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
P+ SY+ LI K R D+A F M Q P++ T N ++ GR ++A
Sbjct: 345 YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDA 402
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 161/381 (42%), Gaps = 36/381 (9%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRI--------- 58
P +Y ++ID+L K + A+ F +M PD FTY LIH +C +
Sbjct: 207 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTL 266
Query: 59 --------------------------GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
G + EA +V M G PNV TY L+DG C
Sbjct: 267 LNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCL 326
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
+ E +V + M PN + +L++G + KA L ++E + +
Sbjct: 327 QSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 386
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
NTL++ + +A A+ +M G +P+ +T+ + L L+E +L T
Sbjct: 387 YNTLMHXCHVGRL-QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 445
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+ P Y ++++ + +AG +++ L NV +Y ++I+ C+ ++D
Sbjct: 446 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLD 505
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A ++ EM +P+ T+NT+ G ++ E + +LL +L GF D T ++
Sbjct: 506 EANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 565
Query: 333 DCLCRAHRFEDALDCLSEMVE 353
+ LC + LSE V+
Sbjct: 566 EMLCDDKLDQSVKQILSEFVQ 586
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
+DAL + M+ PP+T+ +N L+ S+ L +M + I PD+YT N
Sbjct: 50 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI SFC +N++ A +L LG +PD +++ LI+ L G+ +A F M G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
P+ T ++ L + G A +++ S E+G
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLR-SMEQG 203
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P+ R Y +I+ L + +D A F +M + C PD TYN + G+ +
Sbjct: 479 LSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKE 538
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE 104
A++L+++M G++ +V T T+L++ C+ K V ++L
Sbjct: 539 ALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILS 582
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 239/502 (47%), Gaps = 7/502 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +N ++ AL +++ + A L ++MS PD T+ L+ G G ++ A
Sbjct: 176 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LR+ +M +G + T +LI+G+C RV + ++ P++ T + V+G
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNG 295
Query: 125 VFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ C + H A +++ ++ N ++ L N EA IL +M DRG L
Sbjct: 296 L--CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ +TF+ + L TG L E + +GV P T+ +L+ AL K G R
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + +YN +ID C + + +A ++ ++M + +T+NT+I G CK
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + E+ + G + TFN++ID LC+ + +DA +++M+ G+ PN IT
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNIT 533
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN ++ C GD+ ++ + + M A+ D+ T+ LI C+ + + A K M
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 593
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR-F 481
G+RP +Y+ ++++L + +A F M + G PD+ T ++ L + G
Sbjct: 594 IKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPI 653
Query: 482 EEAHDIVKTSKERGI--SFKSF 501
+EA D + ++G F SF
Sbjct: 654 KEAFDFMLEMVDKGFIPEFSSF 675
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 226/493 (45%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
GI T +YN +++ LV+ + + L + +M KPD T+N L+ +CR V
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 198
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A+ ++++M G AP+ T+T L+ GF + RV M E + TV L+
Sbjct: 199 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G + A + + + ++ NT + L N A ++ M G+
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ T++ V CL L E GIL+ + RG P +T+ L+ AL R E
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
V + +V ++N++I+ CKV A + EM++ P+ VT+NTLI C
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ K +LL + G T+N++ID LC+ R E+A + +M G+ N IT
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+N LI LC + + L +M ++ + P+ T+N+++ +C+ I+KA +M
Sbjct: 499 FNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 558
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G D +Y LI L K+GR A + M G P N +L++L ++
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIR 618
Query: 483 EAHDIVKTSKERG 495
+A + + E G
Sbjct: 619 DALSLFREMAEVG 631
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 122/473 (25%), Positives = 219/473 (46%), Gaps = 2/473 (0%)
Query: 24 NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTY 83
+++DL + Q + Q D YN L++ + + + +M G P+V T+
Sbjct: 127 DAVDLILNQLQPLFGIQA--DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 184
Query: 84 TILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME 143
L+ C A +V +LE M R V P+E T +L+ G A + R +E
Sbjct: 185 NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244
Query: 144 REPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
K+ N L+ +A +++ G+ P+ T++ V L +
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 304
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
++D ++ G P TY +++ L K G+ E LN + + ++ ++N +I
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
C N ++ A ++ R++ + ++P++ TFN LI+ CK + H L + G P
Sbjct: 365 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D+ T+N++ID LC + ALD L +M G P +TITYN +I LC + + +F
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+M IS + TFN LI C+ KI+ A M++ GL+P+N +Y++++ K
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQ 544
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G +A +M NG D T ++ L + GR + A +++ + +G+
Sbjct: 545 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGM 597
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 208/445 (46%), Gaps = 15/445 (3%)
Query: 62 DEALRLVKQM---EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
D ALR++ + P VY I G A + +V V E+ +E
Sbjct: 55 DAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVL-VAEMRRE-----GHQVK 108
Query: 119 RSLVHGVFRCLDPHKAFELLIRFM--EREPL----TQKLVCNTLLYRLSNNSMASEAAAI 172
+VH + + F+ + + + +PL +V N LL L S ++
Sbjct: 109 LGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESV 168
Query: 173 LRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK 232
+MG RG P+ TF+ + L + +L+ RGV P +T+ LM+ +
Sbjct: 169 YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVE 228
Query: 233 AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
G R + + + + N++I+ +CK+ ++ A ++ P+ +T
Sbjct: 229 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQIT 288
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+NT ++G C++ V +++ ++++ G PD FT+N +++CLC+ + E+A L++MV
Sbjct: 289 YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 348
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
+ G P+ T+N LI +LC + +L L +++ +SPD+YTFN LI + C++
Sbjct: 349 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPH 408
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
A + F M G PD +Y+ LI L G+ +A ME GC + T N I+
Sbjct: 409 LALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTII 468
Query: 473 ETLVQQGRFEEAHDIVKTSKERGIS 497
+ L ++ R EEA ++ +GIS
Sbjct: 469 DGLCKKMRIEEAEEVFDQMDLQGIS 493
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 195/444 (43%), Gaps = 36/444 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN ++ L +++ + A M + PD FTYNI+++ +C+ G ++EA
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ QM G P++ T+ LI C R+ E + + + V P+ T L++
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + DPH A L +M + G P+
Sbjct: 401 LCKVGDPHLALRL-----------------------------------FEEMKNSGCTPD 425
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L + L + +L G TY +++ L K R E + +
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N ++N +ID CK +D A + +M + PN +T+N++++ +CK
Sbjct: 486 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQG 545
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ K ++L + GF+ D T+ ++I+ LC+A R + AL L M G+ P YN
Sbjct: 546 DIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYN 605
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR-MNKIEKAEKAFFSMLT 423
+++SL ++ +L LF++M PD T+ + + CR I++A M+
Sbjct: 606 PVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVD 665
Query: 424 LGLRPDNFSYSALIKALIKSGRFD 447
G P+ S+ L + L+ G D
Sbjct: 666 KGFIPEFSSFRMLAEGLLNLGMDD 689
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 144/336 (42%), Gaps = 36/336 (10%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ G+SP +N +I+AL K LA F++M C PD TYN LI +C +G
Sbjct: 382 VTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ +AL L+K ME G + TY +IDG C R+ E V + M + + N T +
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 501
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G+ + AF L+ N M SE G
Sbjct: 502 LIDGLCKDKKIDDAFGLI------------------------NQMISE-----------G 526
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P + T++ +T D+ + IL+T G + TY L+ L KAGR
Sbjct: 527 LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 586
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L + + +YN V+ + N + A + REM + P+ +T+ + G
Sbjct: 587 KVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGL 646
Query: 301 CK-DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
C+ + + + ++ +++ GF P+ +F + + L
Sbjct: 647 CRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 240/502 (47%), Gaps = 7/502 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +N ++ AL +++ + A + ++MS PD T+ L+ G G ++ A
Sbjct: 176 GIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LR+ +M +G + T +LI+G+C RV + ++ P++ T + V+G
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNG 295
Query: 125 VFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ C + H A +++ ++ N ++ L N EA IL +M DRG L
Sbjct: 296 L--CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ +TF+ + L TG L E + +GV P T+ +L+ AL K G R
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + +YN +ID C + + +A ++ ++M + +T+NT+I G CK
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + E+ + G + TFN++ID LC+ + +DA + +++M+ G+ PN IT
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNIT 533
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN ++ C GD+ ++ + + M A+ D+ T+ LI C+ + + A K M
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 593
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR-F 481
G+RP +Y+ ++++L + +A F M + G PD+ T ++ L + G
Sbjct: 594 IKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPI 653
Query: 482 EEAHDIVKTSKERGI--SFKSF 501
+EA D + ++G F SF
Sbjct: 654 KEAFDFMLEMVDKGFIPEFSSF 675
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 226/493 (45%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
GI T +YN +++ LV+ + + L + +M KPD T+N L+ +CR V
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 198
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A+ ++++M G AP+ T+T L+ GF + RV M E + TV L+
Sbjct: 199 TAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G + A + + + ++ NT + L N A ++ M G+
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ T++ V CL L E GIL+ + RG P +T+ L+ AL R E
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
V + +V ++N++I+ CKV A + EM++ P+ VT+NTLI C
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ K +LL + G T+N++ID LC+ R E+A + +M G+ N IT
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+N LI LC + + L +M ++ + P+ T+N+++ +C+ I+KA +M
Sbjct: 499 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 558
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G D +Y LI L K+GR A + M G P N +L++L ++
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIR 618
Query: 483 EAHDIVKTSKERG 495
+A + + E G
Sbjct: 619 DALSLFREMAEVG 631
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 122/473 (25%), Positives = 220/473 (46%), Gaps = 2/473 (0%)
Query: 24 NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTY 83
+++DL + Q + Q D YN L++ + + + +M G P+V T+
Sbjct: 127 DAVDLILNQLQPLFGIQA--DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 184
Query: 84 TILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME 143
L+ C A +V +LE M R V P+E T +L+ G A + R +E
Sbjct: 185 NTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244
Query: 144 REPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
K+ N L+ +A +++ G+ P+ T++ V L +
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 304
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
++D ++ G P TY +++ L K G+ E LN + + ++ ++N +I
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
C N ++ A ++ R++ + ++P++ TFN LI+ CK + H L + G P
Sbjct: 365 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D+ T+N++ID LC + ALD L +M G P +TITYN +I LC + + +F
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+M IS + TFN LI C+ KI+ A + M++ GL+P+N +Y++++ K
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQ 544
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G +A +M NG D T ++ L + GR + A +++ + +G+
Sbjct: 545 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGM 597
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 208/445 (46%), Gaps = 15/445 (3%)
Query: 62 DEALRLVKQM---EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
D ALR++ + P VY I G A + +V V E+ +E
Sbjct: 55 DAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVL-VAEMRRE-----GHQVK 108
Query: 119 RSLVHGVFRCLDPHKAFELLIRFM--EREPL----TQKLVCNTLLYRLSNNSMASEAAAI 172
+VH + + F+ + + + +PL +V N LL L S ++
Sbjct: 109 LGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESV 168
Query: 173 LRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK 232
+MG RG P+ TF+ + L + +L+ RGV P +T+ LM+ +
Sbjct: 169 YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVE 228
Query: 233 AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
G R + + + + N++I+ +CK+ ++ A ++ P+ +T
Sbjct: 229 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQIT 288
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+NT ++G C++ V +++ ++++ G PD FT+N +++CLC+ + E+A L++MV
Sbjct: 289 YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 348
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
+ G P+ T+N LI +LC + +L L +++ +SPD+YTFN LI + C++
Sbjct: 349 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPH 408
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
A + F M G PD +Y+ LI L G+ +A ME GC + T N I+
Sbjct: 409 LALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTII 468
Query: 473 ETLVQQGRFEEAHDIVKTSKERGIS 497
+ L ++ R EEA ++ +GIS
Sbjct: 469 DGLCKKMRIEEAEEVFDQMDLQGIS 493
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 196/444 (44%), Gaps = 36/444 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN ++ L +++ + A M + PD FTYNI+++ +C+ G ++EA
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ QM G P++ T+ LI C R+ E + + + V P+ T L++
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + DPH A L +M + G P+
Sbjct: 401 LCKVGDPHLALRL-----------------------------------FEEMKNSGCTPD 425
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L + L + +L G TY +++ L K R E + +
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N ++N +ID CK +D A E+ +M + PN +T+N++++ +CK
Sbjct: 486 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQG 545
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ K ++L + GF+ D T+ ++I+ LC+A R + AL L M G+ P YN
Sbjct: 546 DIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYN 605
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR-MNKIEKAEKAFFSMLT 423
+++SL ++ +L LF++M PD T+ + + CR I++A M+
Sbjct: 606 PVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVD 665
Query: 424 LGLRPDNFSYSALIKALIKSGRFD 447
G P+ S+ L + L+ G D
Sbjct: 666 KGFIPEFSSFRMLAEGLLNLGMDD 689
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 145/336 (43%), Gaps = 36/336 (10%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ G+SP +N +I+AL K LA F++M C PD TYN LI +C +G
Sbjct: 382 VTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ +AL L+K ME G + TY +IDG C R+ E V + M + + N T +
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 501
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G+ + AFEL+ N M SE G
Sbjct: 502 LIDGLCKDKKIDDAFELI------------------------NQMISE-----------G 526
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P + T++ +T D+ + IL+T G + TY L+ L KAGR
Sbjct: 527 LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 586
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L + + +YN V+ + N + A + REM + P+ +T+ + G
Sbjct: 587 KVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGL 646
Query: 301 CK-DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
C+ + + + ++ +++ GF P+ +F + + L
Sbjct: 647 CRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 126/478 (26%), Positives = 229/478 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GIS +T YN +I +L + + A+ QM PD +Y+ +I G C +G + +A
Sbjct: 253 GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKA 312
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L+ M+ G PN YTY +I C + E +VL M + + P+ +L+HG
Sbjct: 313 LKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHG 372
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ A + + ++ + TL+ E + +M RG P+
Sbjct: 373 FFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPD 432
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + ++ + + ++ G+ P TY L++ L K G + L+
Sbjct: 433 EVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLD 492
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K L NV YN +++ CK +++A ++ +EM I P+ +T+ T+I +C+
Sbjct: 493 EMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLG 552
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ K +LL +L+ G +P TFN +++ C ED L M+E G+ P+ ITYN
Sbjct: 553 DIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYN 612
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L++ C + + +++++M+ ++PD T+N LI+ C+ +++A + M+
Sbjct: 613 TLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK 672
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G P SY+ALIK K +F EA++ F M +G D N ++ ++G E
Sbjct: 673 GYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVE 730
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 222/450 (49%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
+YNI+I+ +CR+G V EA RL+ QM+ P+V +Y+ +IDG+C+ + + ++++ M
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDM 319
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
+ + + PN T S++ + + +A ++L M ++ + +V TL++
Sbjct: 320 QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHV 379
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
A +M + P+ T+ + G + E + I RG+KP TY L
Sbjct: 380 RTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTL 439
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ KAG V N + + + N+ +Y +ID CK +D A E+ EMR + +
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL 499
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
N+ +N++++G CK + + +L+ + G PD T+ ++ID CR + A
Sbjct: 500 QLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHK 559
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L EM++ G+ P +T+N+L+ C +G + RL M I PD T+N L++ C
Sbjct: 560 LLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHC 619
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
N + K + M G+ PD+ +Y+ LIK K+ EA + M + G P
Sbjct: 620 IRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVT 679
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ N +++ ++ +F EA ++ + + G+
Sbjct: 680 SYNALIKRFYKKRKFXEARELFEEMRGHGL 709
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 174/377 (46%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P +Y +I K + A F +M + PD TY LI G + G V E
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ 418
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L +M G P+ TYT LID +C A + F + M + + PN T +L+ G+
Sbjct: 419 NLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGL 478
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ + A ELL ++ + N+++ + +A ++++M G P++
Sbjct: 479 CKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDA 538
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + D+++ +L + RG++P T+ +LM G +GDR L
Sbjct: 539 ITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGW 598
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + +V + +YN ++ C N M+ T+I + MR++ +AP+ T+N LI GHCK
Sbjct: 599 MLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARN 658
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + L ++E G+ P ++N++I + +F +A + EM G+ + YN
Sbjct: 659 LKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNF 718
Query: 366 LIRSLCAIGDVARSLRL 382
+ GDV +L L
Sbjct: 719 FVDMCYEEGDVEITLNL 735
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/458 (22%), Positives = 198/458 (43%), Gaps = 39/458 (8%)
Query: 76 YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAF 135
+ PN + I ++E ++L+ + + TV S + R + +
Sbjct: 186 WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLV---VTVDSCNAFLSRIANNSEGI 242
Query: 136 ELLIR-FMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
E+ I+ F E N ++Y L EA +L +M R P+ ++ +
Sbjct: 243 EMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDG 302
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
+L + ++D +G+KP TY ++ L K G+ E ++ L + +++ +
Sbjct: 303 YCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPD 362
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
Y +I F K+ + A + EM + I+P+ +T+ TLI G + +V + + L
Sbjct: 363 NVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFH 422
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA-- 372
++ G KPD+ T+ ++ID C+A +A +EMV+ G+ PN +TY LI LC
Sbjct: 423 EMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHG 482
Query: 373 ---------------------------------IGDVARSLRLFQKMQADRISPDIYTFN 399
G++ ++++L ++M+ I PD T+
Sbjct: 483 ELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYT 542
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
+I ++CR+ I+KA K ML GL+P +++ L+ G ++ + M +
Sbjct: 543 TVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEK 602
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G PD+ T N +++ + I K + +G++
Sbjct: 603 GIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVA 640
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 135/282 (47%), Gaps = 7/282 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G++P+ Y A+ID L K +D A +M + + YN +++GIC+ G +++
Sbjct: 462 MGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQ 521
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A++L+K+ME G P+ TYT +ID +C + + ++L+ M +R + P T L++
Sbjct: 522 AIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMN 581
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G LL +E+ + + NTL+ + + + I ++M ++G P
Sbjct: 582 GFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAP 641
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+S+T++ + +L E + I++G P ++Y L++ YK + E
Sbjct: 642 DSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELF 701
Query: 244 NHVFKDRLVSNVNSYNMVID-CF------CKVNMMDRATEIC 278
+ LV++ YN +D C+ +N+ D A E C
Sbjct: 702 EEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKC 743
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 225/492 (45%), Gaps = 37/492 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
+ P TR YN + LVK+N + L +M D PD T+NILI +C+ + A
Sbjct: 159 AVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPA 218
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +++ M G P+ T+T L+ GF V R+ E+M E +V LV+G
Sbjct: 219 ILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNG 278
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + E +RF+ E G+ P+
Sbjct: 279 LCK----EGRIEEALRFIYEE---------------------------------EGFCPD 301
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ V L + + ++D +++G + TY L+ L K G E L+
Sbjct: 302 QVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILH 361
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
H+ N +YN +I CK N ++ ATE+ R + + + P++ TFN+LI G C +
Sbjct: 362 HMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTS 421
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
EL + E G PD+FT++ +I+ LC R ++AL L EM G N + YN
Sbjct: 422 NREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYN 481
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI LC V + +F +M+ +S T+N LI C+ ++E+A + M+
Sbjct: 482 TLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIME 541
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL+PD F+Y+ ++K + G A +M NGC PD T ++ L + GR + A
Sbjct: 542 GLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVA 601
Query: 485 HDIVKTSKERGI 496
++++ + +G+
Sbjct: 602 SKLLRSVQMKGM 613
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 230/475 (48%), Gaps = 9/475 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ-CKPDRFTYNILIHGICRIGVVDE 63
G+ P + + ++ ++ ++ A L+ +++ V+ C+ + N+L++G+C+ G ++E
Sbjct: 229 GLRPDEKTFTTLMQGFIEEADVEGA-LRIKELMVESGCELTSVSVNVLVNGLCKEGRIEE 287
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
ALR + + EG + P+ T+ L++G C + + +++ M E+ + T SL+
Sbjct: 288 ALRFIYEEEG--FCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLIS 345
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + + +A E+L + R+ + NTL+ L + A + R + +G LP
Sbjct: 346 GLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLP 405
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF+ + L + + + ++G P TY +L+E+L R E L
Sbjct: 406 DVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLL 465
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ NV YN +ID CK N + A +I +M ++ + VT+NTLI+G CK
Sbjct: 466 KEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKS 525
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V + +L+ ++ G KPDKFT+ +M+ C+ + A D + M G P+ +TY
Sbjct: 526 KRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTY 585
Query: 364 NILIRSLCAIG--DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
LI LC G DVA L +M+ ++P Y N +IQ+ C+ + ++A + F M
Sbjct: 586 GTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAY--NPVIQALCKRKRTKEAMRLFREM 643
Query: 422 LTLGLRPDNFSYSALIKALIK-SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ G PD +Y + + L G EA + M + G P+ + + E L
Sbjct: 644 MEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGL 698
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 197/454 (43%), Gaps = 37/454 (8%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
++ L+ + R G D L L++QM + T+ I ++ + + + L ++
Sbjct: 95 FHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLM 154
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
ER+ T RF N L L +
Sbjct: 155 ERDFAVKPDT----------------------RFY-----------NVALSLLVKANKLK 181
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
+ KM P+ STF+ + L L +L+ G++P T+ LM
Sbjct: 182 LVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLM 241
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVN-SYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ + DVEG + + + + S N++++ CK ++ A E +
Sbjct: 242 QGFIEEA-DVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGF 298
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P+ VTFN L++G C+ + + E++ +LE GF+ D +T+NS+I LC+ ++A++
Sbjct: 299 CPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVE 358
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L MV PNT+TYN LI +LC V + L + + + + PD+ TFN+LIQ C
Sbjct: 359 ILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLC 418
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ E A + F M G PD F+YS LI++L R EA ME +GC +
Sbjct: 419 LTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVV 478
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
N +++ L + R +A DI + G+S S
Sbjct: 479 VYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSS 512
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 7/194 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ LG+S S+ YN +I+ L KS ++ A QM ++ KPD+FTY ++ C+ G
Sbjct: 503 MEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGD 562
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A +V+ M G P++ TY LI G C A RV ++L ++ + +
Sbjct: 563 IKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNP 622
Query: 121 LVHGVFRCLDPHKAFELLIRFMER----EPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
++ + + +A L ME+ + +T K+V L + EA +M
Sbjct: 623 VIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGL---CNGGGPIQEAVDFTVEM 679
Query: 177 GDRGYLPESSTFDY 190
++G LPE +F +
Sbjct: 680 LEKGILPEFPSFGF 693
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 235/497 (47%), Gaps = 3/497 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS Y +++A+ KS A +M C P+ TYN++I+G+CR G VD+A
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ G+ P+ +YT ++ G C AKR +V + M E+N PNE T LV
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R +A ++L + +CN ++ + +A L MG G P+
Sbjct: 295 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ + L + +L +++ P T+ + L + G + +
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 414
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N+ +YN +++ FC +D A E+ M PN +T+ TL++G C
Sbjct: 415 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAE 471
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ ELL +L+ P+ TFN ++ C+ ++A++ + +M+E G PN ITYN
Sbjct: 472 RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYN 531
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ + + +L L + ++ +SPDI T++++I R +++E+A K F + L
Sbjct: 532 TLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL 591
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+RP Y+ ++ AL K D A F M NGC P+ T ++E L + +E
Sbjct: 592 GMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKET 651
Query: 485 HDIVKTSKERGISFKSF 501
D+++ RG+ K+
Sbjct: 652 RDLLRELCSRGVLNKNL 668
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 207/454 (45%), Gaps = 41/454 (9%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D F YN L+ G CR G +D A RL+ M AP+ YTYT +I G C+ RV E +L
Sbjct: 112 DVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLL 168
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
+ M R P+ T L+ V + +A E
Sbjct: 169 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAME--------------------------- 201
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
+L +M +G P T++ + + +++ L+ G +P +Y
Sbjct: 202 --------VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSY 253
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
+++ L A R + + + + + N +++M++ FC+ M++RA ++ +M
Sbjct: 254 TTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSG 313
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
A N N +I+ CK V + L + G PD ++ +++ LCRA R+ED
Sbjct: 314 HGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWED 373
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A + L EMV PPN +T+N I LC G + ++ L ++M +I T+NAL+
Sbjct: 374 AKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVN 433
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
FC +++ A + F+SM +P+ +Y+ L+ L + R D A + M Q C P
Sbjct: 434 GFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAP 490
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ T N+++ Q+G +EA ++V+ E G +
Sbjct: 491 NVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCT 524
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 188/407 (46%), Gaps = 7/407 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G P T Y V+ L + + F +M C P+ T+++L+ CR G+
Sbjct: 241 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 300
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V+ A+++++QM G G A N I+I+ C RV + F+ L M P+ + +
Sbjct: 301 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 360
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ R A ELL + + ++ NT + L + +A ++ +M + G
Sbjct: 361 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420
Query: 181 YLPESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
T++ V C+ +D L+ F KP TY L+ L A R
Sbjct: 421 CEVNIVTYNALVNGFCVQGRVD-----SALELFYSMPCKPNTITYTTLLTGLCNAERLDA 475
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
L + + NV ++N+++ FC+ +MD A E+ +M + PNL+T+NTL+
Sbjct: 476 AAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLD 535
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G KD + ELL L+ G PD T++S+I L R R E+A+ + + G+ P
Sbjct: 536 GITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRP 595
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+ YN ++ +LC + ++ F M ++ P+ T+ LI+
Sbjct: 596 KAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 642
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 176/368 (47%), Gaps = 7/368 (1%)
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
D +A L+ R R +C L+ L S+AA +LR G + ++
Sbjct: 58 DLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 117
Query: 190 YTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
V C LD V P TY ++ L GR E L+ +
Sbjct: 118 TLVAGYCRYGQLDAARR-----LIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDML 172
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+V +Y ++++ CK +A E+ EMR + PN+VT+N +I+G C++ V
Sbjct: 173 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 232
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
RE L L GF+PD ++ +++ LC A R+ED + +EM+E PN +T+++L+
Sbjct: 233 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 292
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
R C G V R++++ ++M + + N +I + C+ +++ A + +M + G
Sbjct: 293 RFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS 352
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD SY+ ++K L ++ R+++AK+ M + C P+ T N + L Q+G E+A +
Sbjct: 353 PDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATML 412
Query: 488 VKTSKERG 495
++ E G
Sbjct: 413 IEQMSEHG 420
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 138/303 (45%), Gaps = 3/303 (0%)
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
L+ DL E ++D RG P L+ L + GR + R L + +
Sbjct: 53 LIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVD 112
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
V +YN ++ +C+ +D A + M +AP+ T+ +I G C V + LL
Sbjct: 113 VFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLD 169
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
+L G +P T+ +++ +C++ F A++ L EM G PN +TYN++I +C G
Sbjct: 170 DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREG 229
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
V + ++ + PD ++ +++ C + E E+ F M+ P+ ++
Sbjct: 230 RVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 289
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
L++ + G + A Q M +GC ++ N+++ T+ +QGR ++A +
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349
Query: 495 GIS 497
G S
Sbjct: 350 GCS 352
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 3/132 (2%)
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N +R L A D+A + RL + + +PD+Y LI++ CR + A + +
Sbjct: 47 NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G D F+Y+ L+ + G+ D A++ SM PD+YT I+ L +GR E
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGE 163
Query: 484 AHDIVKTSKERG 495
A ++ RG
Sbjct: 164 ALSLLDDMLHRG 175
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 140/502 (27%), Positives = 239/502 (47%), Gaps = 16/502 (3%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ +V+ DL +Q+M Q D +++NILI C + AL
Sbjct: 75 PSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALST 134
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ LG+ P+V T++ L+ G C RV+E + M PN T +L++G+ R
Sbjct: 135 FGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR----PNVVTFTTLMNGLCR 190
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL-PESS 186
+A LL R +E ++ T++ + A +LRKM + ++ P
Sbjct: 191 EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVV 250
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ + L ++ + ++G+ P TY +++ +GR E R L +
Sbjct: 251 IYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEM 310
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ ++ NV +Y+ +I+ + K A E+ EM R I PN +T+N++I G CK +
Sbjct: 311 LERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRL 370
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ ++ G PD FTFN++ID C A R +D + L EM E G+ +T TYN L
Sbjct: 371 DAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTL 430
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL-- 424
I C +GD+ +L L Q+M + + PDI T N L+ C K++ A + F +M
Sbjct: 431 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 490
Query: 425 ---------GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G+ PD +Y+ LI LI G+F EA++ + M G P++ T + ++ L
Sbjct: 491 DLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGL 550
Query: 476 VQQGRFEEAHDIVKTSKERGIS 497
+Q R +EA + + + S
Sbjct: 551 CKQSRLDEATQMFDSMGSKSFS 572
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 136/531 (25%), Positives = 238/531 (44%), Gaps = 51/531 (9%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N +I + + A F +++ +PD T++ L+HG+C V EAL L QM
Sbjct: 115 FNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM- 173
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
PNV T+T L++G C RV E +L+ M E + PN+ T ++V G+ + D
Sbjct: 174 ---CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTV 230
Query: 133 KAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
A LL + E + +V + ++ L + S+A + +M ++G P+ T++
Sbjct: 231 SALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCM 290
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ + +E +L ++R + P TY L+ A K + E + + + +
Sbjct: 291 IDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGI 350
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+ N +YN +ID FCK N +D A + M + +P++ TFNTLI G+C + E
Sbjct: 351 IPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTE 410
Query: 312 LLVMLLECGFKPDKFTFNSMI-----------------------------------DCLC 336
LL + E G D T+N++I D LC
Sbjct: 411 LLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 470
Query: 337 RAHRFEDALDCLSEMVEW-----------GVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
+ +DAL+ M + GV P+ TYNILI L G + L+++
Sbjct: 471 DNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKE 530
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M I P+ T++++I C+ +++++A + F SM + PD +++ L+ K+GR
Sbjct: 531 MPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGR 590
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
D+ + F M + G D+ T ++ + G A DI + G+
Sbjct: 591 VDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGV 641
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/489 (24%), Positives = 225/489 (46%), Gaps = 12/489 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ + +++ L + + A +M D +P++ TY ++ G+C+IG AL L
Sbjct: 176 PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNL 235
Query: 68 VKQMEGLGY-APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+++ME + + PNV Y+ +IDG R ++ + M+E+ + P+ T ++ G
Sbjct: 236 LRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFC 295
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+A LL +ER+ + + L+ EA + +M RG +P +
Sbjct: 296 SSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTI 355
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + L+ + +G P T+ L++ A R +G L+ +
Sbjct: 356 TYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEM 415
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ LV++ +YN +I FC V ++ A ++ ++M + P++VT NTL+ G C + ++
Sbjct: 416 TETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 475
Query: 307 HKTRELLVMLLEC-----------GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
E+ + + G +PD T+N +I L +F +A + EM G
Sbjct: 476 KDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRG 535
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ PNTITY+ +I LC + + ++F M + SPD+ TFN L+ +C+ +++
Sbjct: 536 IVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGL 595
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ F M G+ D +Y LI K G + A F M +G PD+ T +L L
Sbjct: 596 ELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVL 655
Query: 476 VQQGRFEEA 484
+ + A
Sbjct: 656 WSKEELKRA 664
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 200/428 (46%), Gaps = 27/428 (6%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ +Y+A+ID L K A+ + +M PD FTYN +I G C G EA
Sbjct: 245 IKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQ 304
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
RL+++M PNV TY+ LI+ + ++ E + + M R + PN T S++ G
Sbjct: 305 RLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDG- 363
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F + A E + M + + + NTL+ + +L +M + G + +
Sbjct: 364 FCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVAD 423
Query: 185 SSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFST----------------YLLL 226
++T++ + CLV DLN + I GV P T L +
Sbjct: 424 TTTYNTLIHGFCLVG--DLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEM 481
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+A+ K+ D++ R N V D V +YN++I A E+ +EM R I
Sbjct: 482 FKAMQKSKMDLDASRPFNGVEPD-----VQTYNILISGLINEGKFLEAEELYKEMPHRGI 536
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN +T++++I+G CK + + + ++ + F PD TFN+++ C+A R +D L+
Sbjct: 537 VPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLE 596
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
EM G+ + ITY LI +G++ +L +FQ+M + + PD T +++
Sbjct: 597 LFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLW 656
Query: 407 RMNKIEKA 414
++++A
Sbjct: 657 SKEELKRA 664
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 180/382 (47%), Gaps = 24/382 (6%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P+ Y+A+I+A VK A + +M P+ TYN +I G C+ +D A
Sbjct: 315 INPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAE 374
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M G +P+V+T+ LIDG+C AKR+ + +L M E + + T +L+HG
Sbjct: 375 HMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGF 434
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
D + A +L + + + CNTLL L +N +A + + M +
Sbjct: 435 CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM-------QK 487
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
S D LD + GV+P TY +L+ L G+ +E +
Sbjct: 488 SKMD---------LDASRPF--------NGVEPDVQTYNILISGLINEGKFLEAEELYKE 530
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ +V N +Y+ +I+ CK + +D AT++ M + +P++VTFNTL+SG+CK
Sbjct: 531 MPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGR 590
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V EL + G D T+ ++I + ALD EM+ GV P+TIT
Sbjct: 591 VDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRS 650
Query: 366 LIRSLCAIGDVARSLRLFQKMQ 387
++ L + ++ R++ + + +Q
Sbjct: 651 MLTVLWSKEELKRAVAMLEDLQ 672
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 121/251 (48%), Gaps = 5/251 (1%)
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ R + +V +N ++ ++ D + ++M + I ++ +FN LI C +++
Sbjct: 70 RSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLP 129
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ + GF+PD TF++++ LC R +ALD +M PN +T+ L+
Sbjct: 130 FALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR----PNVVTFTTLM 185
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG-L 426
LC G V ++ L +M D + P+ T+ ++ C++ A M + +
Sbjct: 186 NGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHI 245
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+P+ YSA+I L K GR +A + M++ G PD +T N +++ GR+ EA
Sbjct: 246 KPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQR 305
Query: 487 IVKTSKERGIS 497
+++ ER I+
Sbjct: 306 LLQEMLERKIN 316
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 7/179 (3%)
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
E GF+ + S EDA+D S+MV P+ I +N L+ + +
Sbjct: 38 EAGFRGESLKLRSGFH---EIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPD 94
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+ L+QKM+ +I D+Y+FN LI+ FC +K+ A F + LG +PD ++S L+
Sbjct: 95 LVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLL 154
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
L R EA F M C P+ T ++ L ++GR EA ++ E G+
Sbjct: 155 HGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGL 209
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 80/174 (45%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G+ P + YN +I L+ A +++M P+ TY+ +I+G+C+ +D
Sbjct: 498 FNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLD 557
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA ++ M ++P+V T+ L+ G+C A RV + + M R + + T +L+
Sbjct: 558 EATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLI 617
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
HG + + + A ++ + + ++L L + A A+L +
Sbjct: 618 HGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDL 671
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 238/503 (47%), Gaps = 41/503 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVK-SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
+S LG P YN VI +L S S + + + D C PD +Y ++IHG+ G
Sbjct: 227 MSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEG 286
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+ +A L +M G PNV TY ++ C A+ + + VL M + ++ P+E T
Sbjct: 287 EISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYT 346
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+++HG + CL K EAA + ++M
Sbjct: 347 AMIHG-YSCLGRWK----------------------------------EAAKMFKEMTRE 371
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G +P+ TF+ + L E I + +G KP +Y +L+ GR V+
Sbjct: 372 GLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDM 431
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + + + +V++ + +N++I+ K MMD A I EMR + ++PN+VT+ T+I+
Sbjct: 432 NNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAA 491
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP-P 358
C+ + E L ++ G KP+ ++S+I C A + +SEM++ G+P P
Sbjct: 492 LCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRP 551
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N ++ +I SLC G V + +F + PDI+TFN+LI +C + K++KA
Sbjct: 552 NITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVL 611
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+M++ G PD +YS LI KSGR D+ F M P + T +L+L+ L +
Sbjct: 612 DAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRA 671
Query: 479 GRFEEA----HDIVKTSKERGIS 497
GR A H+++++ IS
Sbjct: 672 GRTSAAKKMFHEMIESGTAMSIS 694
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 138/519 (26%), Positives = 227/519 (43%), Gaps = 42/519 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN+++ AL K+ ++D A L +QM + +PD TY +IHG +G EA
Sbjct: 302 GVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEA 361
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ K+M G P++ T+ L+D C KR E + + + P+ + L+HG
Sbjct: 362 AKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHG 421
Query: 125 VF---RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
R +D + F + + + N L+ + M EA I +M +G
Sbjct: 422 YATEGRFVDMNNLFHSMT---DNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGV 478
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEA------LYKA-- 233
P T+ + L L + L I G+KP Y L++ L KA
Sbjct: 479 SPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKE 538
Query: 234 ----------------------------GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
GR + N V ++ ++N +ID +
Sbjct: 539 LVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGY 598
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C V MD+A + M P++VT++TLI+G+ K + L +L KP
Sbjct: 599 CLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTT 658
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T++ ++D L RA R A EM+E G + TY I+++ LC ++ LF K
Sbjct: 659 VTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHK 718
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
+ A + +I N +I + ++ + E+A F S+ GL P+ +Y +I L+K G
Sbjct: 719 LGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGS 778
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+EA F SME+ GC P S N I+ L+Q+G +A
Sbjct: 779 VEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKA 817
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 217/493 (44%), Gaps = 1/493 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP Y VI L I A F +M P+ TYN ++H +C+ +D+A
Sbjct: 267 GCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKA 326
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++QM P+ TYT +I G+ R E ++ + M + P+ T SL+
Sbjct: 327 ELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDS 386
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A E+ + + + LL+ + + + M D G + +
Sbjct: 387 LCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVAD 446
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S F+ + ++E I +GV P TY ++ AL + GR + L+
Sbjct: 447 SHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLS 506
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA-PNLVTFNTLISGHCKD 303
+ L N Y+ +I FC + +A E+ EM D+ I PN+ F+++I C +
Sbjct: 507 QMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNE 566
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V +++ +++ G +PD FTFNS+ID C + + A L MV G P+ +TY
Sbjct: 567 GRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTY 626
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+ LI G + L LF++M R+ P T++ ++ R + A+K F M+
Sbjct: 627 STLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIE 686
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G +Y+ +++ L ++ DEA F + + N ++ L + R EE
Sbjct: 687 SGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREE 746
Query: 484 AHDIVKTSKERGI 496
AHD+ + G+
Sbjct: 747 AHDLFASVSASGL 759
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 177/405 (43%), Gaps = 7/405 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + +N +I+A K +D A L F +M P+ TY +I +CR+G + +A
Sbjct: 442 GIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADA 501
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVH 123
+ + QM +G PN Y LI GFC + + ++ M ++ + PN S++H
Sbjct: 502 MEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIH 561
Query: 124 GV---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ R ++ F L+I +R + N+L+ +A +L M G
Sbjct: 562 SLCNEGRVMNAQDVFNLVIHIGDRPDI---FTFNSLIDGYCLVGKMDKAFGVLDAMVSAG 618
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T+ + +++ + + + VKP TY L+++ L++AGR
Sbjct: 619 TEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAK 678
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + + ++++Y +++ C+ N D A + ++ ++ + NT+I
Sbjct: 679 KMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHAL 738
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K + +L + G P+ T+ MI L + E+A S M + G P++
Sbjct: 739 YKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSS 798
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
N +IR L G++ ++ K+ IS + T + LI F
Sbjct: 799 RLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLF 843
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 127/247 (51%), Gaps = 8/247 (3%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
V++Y +++DC C+ D + + + + NT + C +T E L
Sbjct: 164 TVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCY---AKRTDEAL 220
Query: 314 VMLL----ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW-GVPPNTITYNILIR 368
MLL E G PD F++N++I LC R ++ALD L M + G P+ ++Y ++I
Sbjct: 221 SMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIH 280
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
L G+++++ LF +M + P++ T+N+++ + C+ ++KAE M ++P
Sbjct: 281 GLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQP 340
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
D +Y+A+I GR+ EA + F M + G PD T N ++++L + R +EA +I
Sbjct: 341 DEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIF 400
Query: 489 KTSKERG 495
+ +G
Sbjct: 401 HSIATKG 407
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 141/313 (45%), Gaps = 37/313 (11%)
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA------- 274
TY +LM+ +A R G + + + L ++ N + C C D A
Sbjct: 167 TYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHR 226
Query: 275 -----------------TEICREMRDRDI-------------APNLVTFNTLISGHCKDA 304
+C R ++ +P++V++ +I G +
Sbjct: 227 MSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEG 286
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E+ K L +++ G P+ T+NS++ LC+A + A L +M + + P+ +TY
Sbjct: 287 EISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYT 346
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I +G + ++F++M + + PDI TFN+L+ S C+ + ++A + F S+ T
Sbjct: 347 AMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATK 406
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G +PD SYS L+ GRF + F SM NG DS+ N+++ ++G +EA
Sbjct: 407 GHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEA 466
Query: 485 HDIVKTSKERGIS 497
I + +G+S
Sbjct: 467 LLIFTEMRGQGVS 479
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 8/266 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P +N++ID +D A+ M +PD TY+ LI+G + G +D+
Sbjct: 582 IGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDD 641
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L L ++M P TY++++DG A R + ++ M E + +T ++
Sbjct: 642 GLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQ 701
Query: 124 GVFR--CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
G+ R C D +A L + + + NT+++ L EA + + G
Sbjct: 702 GLCRNNCTD--EAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGL 759
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLL--LMEALYKAGRDVEG 239
+P +ST+ + L+ + E + + K G P S+ LL ++ L + G V+
Sbjct: 760 VPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAP--SSRLLNDIIRMLLQKGEIVKA 817
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCF 265
Y++ V + ++ +++I F
Sbjct: 818 GYYMSKVDGTIISLEASTTSLLISLF 843
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 235/497 (47%), Gaps = 3/497 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS Y +++A+ KS A +M C P+ TYN++I+G+CR G VD+A
Sbjct: 206 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 265
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ G+ P+ +YT ++ G C AKR +V + M E+N PNE T LV
Sbjct: 266 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 325
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R +A ++L + +CN ++ + +A L MG G P+
Sbjct: 326 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 385
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ + L + +L +++ P T+ + L + G + +
Sbjct: 386 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 445
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N+ +YN +++ FC +D A E+ M PN +T+ TL++G C
Sbjct: 446 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAE 502
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ ELL +L+ P+ TFN ++ C+ ++A++ + +M+E G PN ITYN
Sbjct: 503 RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYN 562
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ + + +L L + ++ +SPDI T++++I R +++E+A K F + L
Sbjct: 563 TLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL 622
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+RP Y+ ++ AL K D A F M NGC P+ T ++E L + +E
Sbjct: 623 GMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKET 682
Query: 485 HDIVKTSKERGISFKSF 501
D+++ RG+ K+
Sbjct: 683 RDLLRELCSRGVLNKNL 699
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 207/454 (45%), Gaps = 41/454 (9%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D F YN L+ G CR G +D A RL+ M AP+ YTYT +I G C+ RV E +L
Sbjct: 143 DVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLL 199
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
+ M R P+ T L+ V + +A E
Sbjct: 200 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAME--------------------------- 232
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
+L +M +G P T++ + + +++ L+ G +P +Y
Sbjct: 233 --------VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSY 284
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
+++ L A R + + + + + N +++M++ FC+ M++RA ++ +M
Sbjct: 285 TTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSG 344
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
A N N +I+ CK V + L + G PD ++ +++ LCRA R+ED
Sbjct: 345 HGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWED 404
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A + L EMV PPN +T+N I LC G + ++ L ++M +I T+NAL+
Sbjct: 405 AKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVN 464
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
FC +++ A + F+SM +P+ +Y+ L+ L + R D A + M Q C P
Sbjct: 465 GFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAP 521
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ T N+++ Q+G +EA ++V+ E G +
Sbjct: 522 NVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCT 555
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 188/407 (46%), Gaps = 7/407 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G P T Y V+ L + + F +M C P+ T+++L+ CR G+
Sbjct: 272 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 331
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V+ A+++++QM G G A N I+I+ C RV + F+ L M P+ + +
Sbjct: 332 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 391
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ R A ELL + + ++ NT + L + +A ++ +M + G
Sbjct: 392 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 451
Query: 181 YLPESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
T++ V C+ +D L+ F KP TY L+ L A R
Sbjct: 452 CEVNIVTYNALVNGFCVQGRVD-----SALELFYSMPCKPNTITYTTLLTGLCNAERLDA 506
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
L + + NV ++N+++ FC+ +MD A E+ +M + PNL+T+NTL+
Sbjct: 507 AAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLD 566
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G KD + ELL L+ G PD T++S+I L R R E+A+ + + G+ P
Sbjct: 567 GITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRP 626
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+ YN ++ +LC + ++ F M ++ P+ T+ LI+
Sbjct: 627 KAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 673
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 178/369 (48%), Gaps = 15/369 (4%)
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A L+ R R +C L+ L S+AA +LR G + F Y
Sbjct: 92 RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVD--VFAYNT 149
Query: 193 TCLVTGLDLNETC--GILDT----FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
LV G C G LD V P TY ++ L GR E L+ +
Sbjct: 150 --LVAGY-----CRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 202
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+V +Y ++++ CK +A E+ EMR + PN+VT+N +I+G C++ V
Sbjct: 203 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 262
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
RE L L GF+PD ++ +++ LC A R+ED + +EM+E PN +T+++L
Sbjct: 263 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 322
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+R C G V R++++ ++M + + N +I + C+ +++ A + +M + G
Sbjct: 323 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC 382
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
PD SY+ ++K L ++ R+++AK+ M + C P+ T N + L Q+G E+A
Sbjct: 383 SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM 442
Query: 487 IVKTSKERG 495
+++ E G
Sbjct: 443 LIEQMSEHG 451
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 133/291 (45%), Gaps = 3/291 (1%)
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
++D RG P L+ L + GR + R L + +V +YN ++ +C
Sbjct: 96 LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYC 155
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
+ +D A + M +AP+ T+ +I G C V + LL +L G +P
Sbjct: 156 RYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVV 212
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+ +++ +C++ F A++ L EM G PN +TYN++I +C G V + ++
Sbjct: 213 TYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRL 272
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ PD ++ +++ C + E E+ F M+ P+ ++ L++ + G
Sbjct: 273 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMV 332
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ A Q M +GC ++ N+++ T+ +QGR ++A + G S
Sbjct: 333 ERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS 383
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 132/491 (26%), Positives = 236/491 (48%), Gaps = 1/491 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS +N+++ L K +D A F M D KP+ TYNI+I +C G V+EA
Sbjct: 346 GCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKD-AKPNISTYNIIIDMLCMAGRVNEA 404
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +ME G PN+ + I++D C A ++ E R+ E ER PN T SL+ G
Sbjct: 405 YKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDG 464
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A+ L + ++ ++ +L+ + + I ++M RG P+
Sbjct: 465 LGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPD 524
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + C+ ++ + I + G P +Y +L+ L KAG+ E
Sbjct: 525 LTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQ 584
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + +YN V+D CK +D+A E+ EM+ + + P + T+ +++ G K
Sbjct: 585 AMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKID 644
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L G + + ++S+ID + R ++A L EM++ G+ PN T+N
Sbjct: 645 RLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 704
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ +L ++ +L FQ M+ + SP+ YT++ LI CR+ K KA + M
Sbjct: 705 SLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQ 764
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL P+ +Y+ +I L K G +A F + NG PDS + N ++E + R EA
Sbjct: 765 GLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEA 824
Query: 485 HDIVKTSKERG 495
+ + + ++ RG
Sbjct: 825 YQVFEETRLRG 835
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 121/529 (22%), Positives = 241/529 (45%), Gaps = 42/529 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P LYN ID K+ S+D+A+ F ++ +PD +Y ++ +C+ G + EA
Sbjct: 242 LEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAE 301
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L QME P Y Y +I G+ +A+R + +++LE ++ER P+ + S +
Sbjct: 302 ELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNS----I 357
Query: 126 FRCLDPHKAFE---LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
CL + + L M+++ N ++ L +EA I +M G
Sbjct: 358 LTCLGKKRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLF 417
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG-------- 234
P + + V L L E I ++ +RG P TY L++ L K G
Sbjct: 418 PNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRL 477
Query: 235 ---------------------------RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
R +G + + + ++ N +DC K
Sbjct: 478 FEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFK 537
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+++ I +M+ P++ +++ LI G K + +T + + + GF D
Sbjct: 538 AGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARA 597
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+N+++D LC++ + + A + L EM V P TY ++ L I + + LF++ +
Sbjct: 598 YNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAK 657
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ I ++ +++LI F ++ +I++A M+ GL P+ +++++L+ AL+K+ D
Sbjct: 658 SKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEID 717
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
EA F SM++ C+P++YT ++++ L + ++ +A + +++G+
Sbjct: 718 EALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGL 766
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/495 (23%), Positives = 224/495 (45%), Gaps = 1/495 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L P Y +I AL ++ + A +QM + + L+ + R G ++
Sbjct: 170 LKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEP 229
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL LV +++G P++ Y + ID F A V ++ +K + P++ + S+V
Sbjct: 230 ALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVW 289
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +A EL + + NT++ + +A +L ++ +RG +P
Sbjct: 290 VLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIP 349
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+F+ +TCL ++E + D +K+ KP STY ++++ L AGR E +
Sbjct: 350 SVVSFNSILTCLGKKRKVDEALTLFDV-MKKDAKPNISTYNIIIDMLCMAGRVNEAYKIR 408
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + L N+ S N+++D CK N ++ A I +R PN VT+ +LI G K
Sbjct: 409 DEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKK 468
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ L +L+ G + + S+I R ED EM+ G P+
Sbjct: 469 GKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLL 528
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N + + G+V + +F+ M++ PD+ +++ LI + + + F +M
Sbjct: 529 NTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQ 588
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G D +Y+A++ L KSG+ D+A + M+ +P T I++ L + R +E
Sbjct: 589 QGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDE 648
Query: 484 AHDIVKTSKERGISF 498
A+ + + +K +GI
Sbjct: 649 AYMLFEEAKSKGIEL 663
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 181/432 (41%), Gaps = 40/432 (9%)
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+++++M LGY L+ ++R+ + FRV+ M+ P + L+ +
Sbjct: 127 KVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGAL 186
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
P +A EL LR+M D GY
Sbjct: 187 AEARQPERALEL-----------------------------------LRQMQDVGYEVSV 211
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
F V L + ++D ++P Y + ++ KAG ++ +
Sbjct: 212 PLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHE 271
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ L + SY ++ CK + A E+ +M P +NT+I G+
Sbjct: 272 LKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAER 331
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+LL L E G P +FNS++ CL + + ++AL L ++++ PN TYNI
Sbjct: 332 FDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL-TLFDVMKKDAKPNISTYNI 390
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+I LC G V + ++ +M+ + P++ + N ++ C+ N++E+A + F S G
Sbjct: 391 IIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERG 450
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG--CNPDSYTSNLILETLVQQGRFEE 483
P++ +Y +LI L K G+ D+A + F M G NP YTS ++ GR E+
Sbjct: 451 CNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTS--LIRNFFMHGRKED 508
Query: 484 AHDIVKTSKERG 495
H I K RG
Sbjct: 509 GHKIYKEMIRRG 520
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 106/230 (46%), Gaps = 3/230 (1%)
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
++ A + MR P + LI + + + ELL + + G++ F +
Sbjct: 157 LEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTT 216
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
++ L R + E AL + E+ + P+ + YN+ I G V + + F +++A
Sbjct: 217 LVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHG 276
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ PD ++ +++ C+ ++ +AE+ F M P ++Y+ +I + RFD+A
Sbjct: 277 LRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAY 336
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA---HDIVKTSKERGIS 497
+ + + GC P + N IL L ++ + +EA D++K + IS
Sbjct: 337 KLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNIS 386
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 37/163 (22%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ +N+++DALVK+ ID A + FQ M +C P+ +TY+ILI+G+CR+ ++A
Sbjct: 695 GLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKA 754
Query: 65 LRLVKQMEGLGYAPNVYTYTI-----------------------------------LIDG 89
++M+ G PNV TYT LI+G
Sbjct: 755 FVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEG 814
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR--CLD 130
NA R E ++V E + R N T SL+ + + CL+
Sbjct: 815 MSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLE 857
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 235/497 (47%), Gaps = 3/497 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS Y +++A+ KS A +M C P+ TYN++I+G+CR G VD+A
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ G+ P+ +YT ++ G C AKR +V + M E+N PNE T LV
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R +A ++L + +CN ++ + +A L MG G P+
Sbjct: 295 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ + L + +L +++ P T+ + L + G + +
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 414
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N+ +YN +++ FC +D A E+ M PN +T+ TL++G C
Sbjct: 415 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAE 471
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ ELL +L+ P+ TFN ++ C+ ++A++ + +M+E G PN ITYN
Sbjct: 472 RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYN 531
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ + + +L L + ++ +SPDI T++++I R +++E+A K F + L
Sbjct: 532 TLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL 591
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+RP Y+ ++ AL K D A F M NGC P+ T ++E L + +E
Sbjct: 592 GMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKET 651
Query: 485 HDIVKTSKERGISFKSF 501
D+++ RG+ K+
Sbjct: 652 RDLLRELCSRGVLNKNL 668
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 207/454 (45%), Gaps = 41/454 (9%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D F YN L+ G CR G +D A RL+ M AP+ YTYT +I G C+ RV E +L
Sbjct: 112 DVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLL 168
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
+ M R P+ T L+ V + +A E
Sbjct: 169 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAME--------------------------- 201
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
+L +M +G P T++ + + +++ L+ G +P +Y
Sbjct: 202 --------VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSY 253
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
+++ L A R + + + + + N +++M++ FC+ M++RA ++ +M
Sbjct: 254 TTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSG 313
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
A N N +I+ CK V + L + G PD ++ +++ LCRA R+ED
Sbjct: 314 HGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWED 373
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A + L EMV PPN +T+N I LC G + ++ L ++M +I T+NAL+
Sbjct: 374 AKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVN 433
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
FC +++ A + F+SM +P+ +Y+ L+ L + R D A + M Q C P
Sbjct: 434 GFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAP 490
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ T N+++ Q+G +EA ++V+ E G +
Sbjct: 491 NVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCT 524
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 179/372 (48%), Gaps = 15/372 (4%)
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
D +A L+ R R +C L+ L S+AA +LR G + F
Sbjct: 58 DLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVD--VFA 115
Query: 190 YTVTCLVTGLDLNETC--GILDT----FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
Y LV G C G LD V P TY ++ L GR E L
Sbjct: 116 YNT--LVAGY-----CRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLL 168
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +V +Y ++++ CK +A E+ EMR + PN+VT+N +I+G C++
Sbjct: 169 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 228
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V RE L L GF+PD ++ +++ LC A R+ED + +EM+E PN +T+
Sbjct: 229 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 288
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
++L+R C G V R++++ ++M + + N +I + C+ +++ A + +M +
Sbjct: 289 DMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGS 348
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G PD SY+ ++K L ++ R+++AK+ M + C P+ T N + L Q+G E+
Sbjct: 349 YGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQ 408
Query: 484 AHDIVKTSKERG 495
A +++ E G
Sbjct: 409 ATMLIEQMSEHG 420
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 187/407 (45%), Gaps = 7/407 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G P T Y V+ L + + F +M C P+ T+++L+ CR G+
Sbjct: 241 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 300
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V+ A+++++QM G G A N I+I+ C RV + F+ L M P+ + +
Sbjct: 301 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 360
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ R A ELL + + ++ NT + L + +A ++ +M + G
Sbjct: 361 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420
Query: 181 YLPESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
T++ V C+ +D L+ F KP TY L+ L A R
Sbjct: 421 CEVNIVTYNALVNGFCVQGRVD-----SALELFYSMPCKPNTITYTTLLTGLCNAERLDA 475
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
L + + NV ++N+++ FC+ +MD A E+ +M + PNL+T+NTL+
Sbjct: 476 AAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLD 535
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G D + ELL L+ G PD T++S+I L R R E+A+ + + G+ P
Sbjct: 536 GITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRP 595
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+ YN ++ +LC + ++ F M ++ P+ T+ LI+
Sbjct: 596 KAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 642
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 138/303 (45%), Gaps = 3/303 (0%)
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
L+ DL E ++D RG P L+ L + GR + R L + +
Sbjct: 53 LIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVD 112
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
V +YN ++ +C+ +D A + M +AP+ T+ +I G C V + LL
Sbjct: 113 VFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLD 169
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
+L G +P T+ +++ +C++ F A++ L EM G PN +TYN++I +C G
Sbjct: 170 DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREG 229
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
V + ++ + PD ++ +++ C + E E+ F M+ P+ ++
Sbjct: 230 RVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 289
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
L++ + G + A Q M +GC ++ N+++ T+ +QGR ++A +
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349
Query: 495 GIS 497
G S
Sbjct: 350 GCS 352
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 3/132 (2%)
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N +R L A D+A + RL + + +PD+Y LI++ CR + A + +
Sbjct: 47 NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G D F+Y+ L+ + G+ D A++ SM PD+YT I+ L +GR E
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGE 163
Query: 484 AHDIVKTSKERG 495
A ++ RG
Sbjct: 164 ALSLLDDMLHRG 175
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 149/558 (26%), Positives = 243/558 (43%), Gaps = 70/558 (12%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y +I+A ++ + +M C P TYN++I G+CR G VDEA L K M+
Sbjct: 239 YTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMD 298
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G +V+TY+ILIDGF KR E +LE M + + P +L+ G R D
Sbjct: 299 KKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSG 358
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD--- 189
+AF + + R N L+ + +A A+L +M G P++ T++
Sbjct: 359 EAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMI 418
Query: 190 ----------------------------YTVTCLVTGL----DLNETCGILDTFIKRGVK 217
YT ++ GL + + + + + GVK
Sbjct: 419 EGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVK 478
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
P Y L++ + GR E R L + K + +V YN VI CK M+ A +
Sbjct: 479 PNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDY 538
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF---------------- 321
EM +R + PN+ T+ LI G+CK E+ +L CG
Sbjct: 539 LVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCK 598
Query: 322 -------------------KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
PD T++++I L R + + A++ LSE +E G+ P+ T
Sbjct: 599 EGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFT 658
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN +I C G + ++ +L + M ISP+I T+NALI C+ +IE+A + F +
Sbjct: 659 YNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIP 718
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
GL + +Y+ +I KSG +A + F M G PDS+ + +++ ++G E
Sbjct: 719 GKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTE 778
Query: 483 EAHDIVKTSKERGISFKS 500
+A + S ++G + S
Sbjct: 779 KALSLFLESVQKGFASTS 796
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 226/485 (46%), Gaps = 11/485 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI P T+ YN +I+ +K + +M P +T ++I+G+CR G +++
Sbjct: 405 VGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIED 464
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A R+ + M LG PN YT LI G R E R+L++M ++ V P+ S++
Sbjct: 465 ASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVII 524
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +A + L+ +ER L++ + A ++M G P
Sbjct: 525 GLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAP 584
Query: 184 ESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
D T L+ G E I + R V P TY L+ L + G+
Sbjct: 585 N----DVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGA 640
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L+ + LV +V +YN +I FCK + +A ++ M + I+PN++T+N LI+G
Sbjct: 641 MELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALING 700
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK E+ + REL + G + T+ ++ID C++ A EM GVPP+
Sbjct: 701 LCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPD 760
Query: 360 TITYNILIRSLCAIGDVARSLRLF-QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ Y+ LI G+ ++L LF + +Q S + NAL+ FC+ K+ +A +
Sbjct: 761 SFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTS--SLNALMDGFCKSGKVIEANQLL 818
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M+ ++PD+ +Y+ LI K+G EA+Q F+ M++ P++ T +L
Sbjct: 819 EDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMA 878
Query: 479 GRFEE 483
GR E
Sbjct: 879 GRRSE 883
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 233/488 (47%), Gaps = 8/488 (1%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N ++ L+K+N ++L + + M D +TY LI+ R G E RL+ +ME
Sbjct: 205 NGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEE 264
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF---RCLD 130
G +P++ TY ++I G C A V E F + ++M ++ + + T L+ G RC +
Sbjct: 265 KGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTE 324
Query: 131 PHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
+L++ M + L V T L+ + EA + +M RG T++
Sbjct: 325 A----KLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYN 380
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
V + D+ + +L+ I G+KP TY ++E K L+ + K
Sbjct: 381 ALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKS 440
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
LV + M+I+ C+ ++ A+ + M + PN V + TLI GH ++ +
Sbjct: 441 NLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEA 500
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+L ++ + G +PD +NS+I LC++ + E+A D L EM+E G+ PN TY LI
Sbjct: 501 VRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHG 560
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
C G++ + R F++M I+P+ ALI +C+ +A F ML + PD
Sbjct: 561 YCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPD 620
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+YSALI L+++G+ A + + G PD +T N I+ +QG +A + +
Sbjct: 621 VRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHE 680
Query: 490 TSKERGIS 497
++GIS
Sbjct: 681 YMCQKGIS 688
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 217/494 (43%), Gaps = 36/494 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN+VI L KS ++ A +M KP+ +TY LIHG C+ G + A
Sbjct: 511 GVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVA 570
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R K+M G G APN T LIDG+C E + M R+V P+ T +L+HG
Sbjct: 571 DRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHG 630
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R A ELL F+ ++G +P+
Sbjct: 631 LLRNGKLQGAMELLSEFL-----------------------------------EKGLVPD 655
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ ++ + + + + ++G+ P TY L+ L KAG +
Sbjct: 656 VFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFD 715
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L N +Y +ID +CK + +A + EM + + P+ ++ LI G K+
Sbjct: 716 GIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEG 775
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
K L + ++ GF + N+++D C++ + +A L +MV+ V P+ +TY
Sbjct: 776 NTEKALSLFLESVQKGFASTS-SLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYT 834
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
ILI C G + + + F MQ + P+ T+ AL+ + + + F M+
Sbjct: 835 ILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAK 894
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ PD ++S +I A +K G + + M + G N +++++ L ++ E
Sbjct: 895 DIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEV 954
Query: 485 HDIVKTSKERGISF 498
+++ +E+G++
Sbjct: 955 LKVLEKIEEQGLNL 968
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 205/436 (47%), Gaps = 7/436 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P+ + A+ID K S A F+ M PD TY+ LIHG+ R G + A
Sbjct: 581 GIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGA 640
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ + G P+V+TY +I GFC + + F++ E M ++ + PN T +L++G
Sbjct: 641 MELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALING 700
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + +A EL + + T++ + S+A + +M +G P+
Sbjct: 701 LCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPD 760
Query: 185 SSTFDYTVTCLVTGL-DLNETCGILDTFIKRGVKPRFSTYLL--LMEALYKAGRDVEGDR 241
S + + L+ G T L F++ K ST L LM+ K+G+ +E ++
Sbjct: 761 S----FVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQ 816
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + + + +Y ++ID CK + A + +M+ R++ PN +T+ L+SG+
Sbjct: 817 LLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYN 876
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ L ++ +PD T++ MID + L + +M++ G +
Sbjct: 877 MAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKN 936
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
++LI LC V+ L++ +K++ ++ + T + L++ F + K++ A + SM
Sbjct: 937 VCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSM 996
Query: 422 LTLGLRPDNFSYSALI 437
+ PD+ + LI
Sbjct: 997 VRFKWVPDSTELNDLI 1012
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 168/388 (43%), Gaps = 37/388 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN++I K I A+ + M P+ TYN LI+G+C+ G ++ A
Sbjct: 651 GLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERA 710
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + G G A N TY +IDG+C + +++ FR+ + M + V P+ +L+ G
Sbjct: 711 RELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDG 770
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + KA L + +++ N L+ + EA +L M D+ P+
Sbjct: 771 CRKEGNTEKALSLFLESVQK-GFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPD 829
Query: 185 SSTF----DY---------------------------TVTCLVTGLDL----NETCGILD 209
T+ DY T T L++G ++ +E + D
Sbjct: 830 HVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFD 889
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
I + ++P T+ ++++A K G V+ + ++ + K + N +++ID C+
Sbjct: 890 EMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKE 949
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+ ++ ++ ++ + +L T +TL+ K ++ +L ++ + PD N
Sbjct: 950 HVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELN 1009
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVP 357
+I+ + E+A D L +M W V
Sbjct: 1010 DLINVEQDSTDSENAGDFLKQMA-WEVA 1036
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 87/211 (41%)
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
V F LI G+ K + + GF N ++ L +A++ E +
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M+E V + TY LI + G+ RL +M+ SP + T+N +I CR +
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+++A + M GL D F+YS LI K R EAK M G P
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346
Query: 471 ILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+++ ++QG EA + + RG+ F
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLF 377
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 136/494 (27%), Positives = 234/494 (47%), Gaps = 6/494 (1%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP + VI+ L + +D A+ ++ C+PD TYN+ I G+C+ VD+A +
Sbjct: 4 SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L+K+M+ P TYT L+DG A R+ E VLE M E+ P T ++ G+
Sbjct: 64 LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ +A + + + V L+ L + EA A+ ++ R + +
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183
Query: 187 TFDYTVTCLVTGL----DLNETCGIL-DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
T T L+ GL + E + D ++RG P TY +++ L K GR EG
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + + +Y +ID F K M+ +A + R+M + VT+N ++ G C
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC 303
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K V + + + E G T+++++D C A++ M++ G PN +
Sbjct: 304 KAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLV 363
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC-RMNKIEKAEKAFFS 420
+YNI+IR LC G +A++ F+K+ R+ PD+YTFNA + C R++ + + F S
Sbjct: 364 SYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFES 423
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M++ G P+ SYS L+ + ++G + A + F M G PD N ++ L GR
Sbjct: 424 MVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGR 483
Query: 481 FEEAHDIVKTSKER 494
+EA ++ + + R
Sbjct: 484 VDEALEVFRELERR 497
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 130/487 (26%), Positives = 234/487 (48%), Gaps = 7/487 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN ID L K+ +D A+ ++M +C P TY L+ G+ + G +DEA
Sbjct: 37 GCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEA 96
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +++QM G +P + TYT++IDG A RV E R+ M P+ +L+ G
Sbjct: 97 MAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKG 156
Query: 125 VFRCLDPHKAFELLIRFMERE----PLTQKLVCNTLLYRLSNNSMASEAAAILRKMG-DR 179
+ + P +A+ L R+ + + +L+ L EA + +R
Sbjct: 157 LCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVER 216
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G++P++ T+ + L + E C RG +P TY L++ KA +
Sbjct: 217 GFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKA 276
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
R + + V + +YN+++D CK + A M +R +VT++ L+ G
Sbjct: 277 HRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDG 336
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
C + V EL +L+ G +P+ ++N +I LCRA + A ++++ + P+
Sbjct: 337 FCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPD 396
Query: 360 TITYNILIRSLCA-IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
T+N + LC + V+ + LF+ M + SP++++++ L+ CR +E A + F
Sbjct: 397 VYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIF 456
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M++ G+ PD ++ LI+ L +GR DEA + F +E+ PD+++ +L+ L +
Sbjct: 457 REMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSA-PDAWSYWSLLDGLSRC 515
Query: 479 GRFEEAH 485
R EEA
Sbjct: 516 ERMEEAR 522
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 153/353 (43%), Gaps = 40/353 (11%)
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ F + L L+E +L+ ++ G +P + TY + ++ L KA R + +
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + + + + +Y ++D K +D A + +M ++ +P L T+ +I G K
Sbjct: 65 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124
Query: 303 DAEVHKTRELLVMLLECGFKPDKF------------------------------------ 326
V + R + V +L G +PD F
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184
Query: 327 ---TFNSMIDCLCRAHRFEDALDCLS-EMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
T+ S+ID LC+A R +A E VE G P+ +TY +I LC +G V
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
F +M+ PD T+ ALI F + I KA + + ML G +Y+ ++ L K
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 304
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+GR EA TFL+ME+ GC T + +++ +G A ++ + +RG
Sbjct: 305 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG 357
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 135/524 (25%), Positives = 237/524 (45%), Gaps = 39/524 (7%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
++ ++P+ Y+ +I + ++ + F + + D N L++G+C V
Sbjct: 87 YIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVG 146
Query: 63 EALR-LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC---PNEATV 118
EA+ L+++M LG P+ +Y IL+ G CN KR E +L +M + V PN +
Sbjct: 147 EAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSY 206
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
++++G F K + L + M+R + T++ L + A A+ ++M D
Sbjct: 207 STVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMID 266
Query: 179 RGYLPESSTFDYTV--------------------------TCLVTGLDLNETCG------ 206
G P T++ + C G LN C
Sbjct: 267 NGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCRE 326
Query: 207 ---ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
D+ I +G+KP +TY +++ G E LN + + + N + +N+
Sbjct: 327 ARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFS 386
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
+ K ++D+A +I +MR + ++P+ V++ LI CK V ++ G P
Sbjct: 387 AYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTP 446
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D F+S++ LC ++E + EM+ G+ PN + +N ++ +LC G V RL
Sbjct: 447 DIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLV 506
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
++ + PD+ ++N LI C I++A K M+++GL+PD+FSY+ L+ K+
Sbjct: 507 DSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKA 566
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
GR D A F M NG P T N IL L Q RF EA ++
Sbjct: 567 GRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKEL 610
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 136/504 (26%), Positives = 228/504 (45%), Gaps = 15/504 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ---CKPDRFTYNILIHGICRIGV 60
LG P T YN ++ L + A M+ DQ C P+ +Y+ +I+G G
Sbjct: 159 LGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQ 218
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD+ L +M G P+V TYT +IDG C A+ V + M + V PN T
Sbjct: 219 VDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNC 278
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+HG + +L P +LL L N EA M +G
Sbjct: 279 LIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKG 338
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P +T+ + T L+E +L+ + G+ P + + A K G +
Sbjct: 339 IKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAM 398
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
N + + L + SY +ID CK+ +D A +M + + P++V F++L+ G
Sbjct: 399 DIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGL 458
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR------AHRFEDALDCLSEMVEW 354
C + K EL +L G P+ FN+++ LC+ R D+++C+
Sbjct: 459 CTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECM------ 512
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
GV P+ I+YN LI C G + + +L + M + + PD +++N L+ +C+ +I+ A
Sbjct: 513 GVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSA 572
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
F ML+ G+ P +Y+ ++ L ++ RF EAK+ +L+M +G D YT N+IL
Sbjct: 573 YSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNG 632
Query: 475 LVQQGRFEEAHDIVKTSKERGISF 498
L + +EA + + +G+
Sbjct: 633 LCKSNCVDEAIKMFQNLCSKGLQL 656
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 241/493 (48%), Gaps = 8/493 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y+ VI+ +D Y F +M PD TY +I G+C+ + D A +
Sbjct: 201 PNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAV 260
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV-- 125
+QM G PN+ TY LI G+ + + EV R+LE M PN T SL++ +
Sbjct: 261 FQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCK 320
Query: 126 -FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
RC + F+ +I + +T + +L+ + SE +L M G P
Sbjct: 321 NGRCREARFFFDSMIGKGIKPSVTTYGI---MLHGYATKGALSEMHDLLNLMVANGISPN 377
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F+ + +++ I + ++G+ P +Y L++AL K GR + + N
Sbjct: 378 HHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFN 437
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + ++ ++ ++ C V+ ++ E+ EM + I PN+V FNT++ CK+
Sbjct: 438 QMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEG 497
Query: 305 EVHKTRELLVMLLEC-GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V + + LV +EC G +PD ++N++ID C A ++A L MV G+ P++ +Y
Sbjct: 498 RVMEGQR-LVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSY 556
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L+ C G + + F+KM ++ I+P + T+N ++ + + +A++ + +M+
Sbjct: 557 NTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMIN 616
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G + D ++Y+ ++ L KS DEA + F ++ G + T N+++ L++ GR E+
Sbjct: 617 SGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKED 676
Query: 484 AHDIVKTSKERGI 496
A D+ G+
Sbjct: 677 AMDLFAAIPANGL 689
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 123/496 (24%), Positives = 228/496 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P Y VID L K+ D A FQQM + KP+ TYN LIHG IG E
Sbjct: 233 GIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEV 292
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+R++++M G PN TY L++ C R E + M + + P+ T ++HG
Sbjct: 293 VRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHG 352
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +LL + + N + + +A I KM +G P+
Sbjct: 353 YATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPD 412
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ + L +++ + I GV P + L+ L + + +
Sbjct: 413 AVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFF 472
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N+ +N ++ CK + + + + P+++++NTLI GHC
Sbjct: 473 EMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAG 532
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + +LL ++ G KPD F++N+++ C+A R + A +M+ G+ P +TYN
Sbjct: 533 TIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYN 592
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++ L + + L+ M DIYT+N ++ C+ N +++A K F ++ +
Sbjct: 593 TILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSK 652
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL+ + +++ +I AL+K GR ++A F ++ NG + T L++E L+++G EE
Sbjct: 653 GLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEF 712
Query: 485 HDIVKTSKERGISFKS 500
+ ++ G + S
Sbjct: 713 DSLFSAMEKNGTAPNS 728
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/559 (23%), Positives = 237/559 (42%), Gaps = 63/559 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRI------ 58
G+SP Y A+IDAL K +D A +KF QM + PD ++ L++G+C +
Sbjct: 408 GLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKV 467
Query: 59 -----------------------------GVVDEALRLVKQMEGLGYAPNVYTYTILIDG 89
G V E RLV +E +G P+V +Y LIDG
Sbjct: 468 EELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDG 527
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C A + E ++LE M + P+ + +L+HG + A+ + +
Sbjct: 528 HCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPG 587
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ NT+L+ L SEA + M + G + T++ + L ++E +
Sbjct: 588 VVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQ 647
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+G++ T+ +++ AL K GR + + + LV NV +Y +V++ +
Sbjct: 648 NLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEG 707
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
++ + M APN N L+ ++ + L L E F + T +
Sbjct: 708 SLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTS 767
Query: 330 SMIDCLC----------------------------RAHRFEDALDCLSEMVEWGVPPNTI 361
+I +A R +DA EM+ G+ P+ +
Sbjct: 768 MLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVV 827
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN ++ L G + + L+ M R +IYT+N ++ C+ N +++A K F S+
Sbjct: 828 TYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSL 887
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ GL+ + +++ +I AL+K GR ++A F ++ NG PD T L+ E L+++G
Sbjct: 888 CSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSL 947
Query: 482 EEAHDIVKTSKERGISFKS 500
EE + T ++ G S
Sbjct: 948 EEFDGLFLTMEKSGTPLDS 966
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/502 (23%), Positives = 209/502 (41%), Gaps = 11/502 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I +G+ P YN +ID + +ID A + M KPD F+YN L+HG C+ G
Sbjct: 509 IECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGR 568
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+D A ++M G P V TY ++ G KR +E + M + T
Sbjct: 569 IDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNI 628
Query: 121 LVHGVFR--CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
+++G+ + C+D +A ++ + + N ++ L +A + +
Sbjct: 629 ILNGLCKSNCVD--EAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPA 686
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G + T+ V L+ L E + K G P L+ L G
Sbjct: 687 NGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISR 746
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
YL+ + + ++ +M+I F A + ++ R N + LI
Sbjct: 747 AGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYR----ILNEANSSALIK 802
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
K + L +L G PD T+N+++ L + RF +A + M+
Sbjct: 803 ---KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQM 859
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N TYNI++ LC V + ++FQ + + + +I TFN +I + + + E A F
Sbjct: 860 NIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLF 919
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
++ GL PD +Y + + LI+ G +E FL+ME++G DS N ++ L+Q+
Sbjct: 920 AAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQR 979
Query: 479 GRFEEAHDIVKTSKERGISFKS 500
G A + E+ S ++
Sbjct: 980 GDISRAGAYLSKLDEKNFSLEA 1001
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 114/490 (23%), Positives = 221/490 (45%), Gaps = 28/490 (5%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P + YN ++ K+ ID AY F++M + P TYN ++HG+ + E
Sbjct: 547 VGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSE 606
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L M G ++YTY I+++G C + V E ++ + + + + N T ++
Sbjct: 607 AKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIG 666
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA-----AILRKMGD 178
+ + A +L P LV N + YRL ++ E + ++ M
Sbjct: 667 ALLKGGRKEDAMDLFAAI----P-ANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEK 721
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P S + V L+ D++ L +R ST +L+
Sbjct: 722 NGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIF-------S 774
Query: 239 GDRYLNHVF----KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
D Y +H K R+++ NS ++ K +D A + REM + + P++VT+N
Sbjct: 775 SDEYQHHAKSLPKKYRILNEANSSALIK----KARRIDDAYSLFREMLMKGLTPDVVTYN 830
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
T++ G + + +EL + ++ + + +T+N +++ LC+++ ++A +
Sbjct: 831 TILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSK 890
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G+ N IT+NI+I +L G ++ LF + A+ + PD+ T+ + ++ +E+
Sbjct: 891 GLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEF 950
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM-EQNGCNPDSYTSNLILE 473
+ F +M G D+ +AL++ L++ G A + E+N S TS LI
Sbjct: 951 DGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELI-- 1008
Query: 474 TLVQQGRFEE 483
+L +G ++
Sbjct: 1009 SLFSRGEYQH 1018
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 133/521 (25%), Positives = 243/521 (46%), Gaps = 39/521 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P Y+ +I + ++ + F + + + N L+ G+C + EA+
Sbjct: 90 VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149
Query: 66 R-LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE---RNVCPNEATVRSL 121
L+K+M LG P+V +Y L+ GFCN KR E +L +M + R+ PN + ++
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++G F KA+ L + M+R + T++ L + A + ++M D+G
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269
Query: 182 LPESSTFDYTV--------------------------TCLVTGLDLNETCG--------- 206
P++ T++ + C G LN C
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
D+ I++G+KP + Y +L+ G E LN + ++ L + + +N++ +
Sbjct: 330 FFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K M+D A I +M+ + ++P++V F LI CK V ++ G P+ F
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIF 449
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
FNS++ LC ++E A + EM+ G+ P+ + +N ++ +LC G V ++ RL M
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLM 509
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ PD+ ++ LI C + +I++A K+ ML++GL+PD ++Y+ L+ ++GR
Sbjct: 510 ERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRI 569
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
D+A F M +NG P T + IL L RF EA ++
Sbjct: 570 DDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKEL 610
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/496 (26%), Positives = 230/496 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ Y VID L K+ +D A FQQM KPD TYN LIHG IG E
Sbjct: 233 GIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEV 292
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+R++++M G P+ YTY L++ CN R E + M + + PN A L+HG
Sbjct: 293 VRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHG 352
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +LL +E + N + + +M EA I KM +G P+
Sbjct: 353 YATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPD 412
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F + L +++ + + GV P + L+ L + + +
Sbjct: 413 VVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYF 472
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +V +N ++ C + +A + M P+++++ TLI GHC
Sbjct: 473 EMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVG 532
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + L ++L G KPD++T+N+++ CRA R +DA EM+ G+ P +TY+
Sbjct: 533 RIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYS 592
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++ L + + L+ M +I+ +N ++ + N +++A K F S+ +
Sbjct: 593 TILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ + +++ +I AL KSGR ++A F ++ G PD +T LI E L+++G EE
Sbjct: 653 DFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEF 712
Query: 485 HDIVKTSKERGISFKS 500
D+ ++ G + S
Sbjct: 713 DDLFSAMEKSGTTPNS 728
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 229/506 (45%), Gaps = 11/506 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ---CKPDRFTYNILIHGICRIGV 60
LG +P YN ++ + A M+ Q C P+ +Y +I+G G
Sbjct: 159 LGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQ 218
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD+A L +M G PNV TYT +IDG C A+ V V + M ++ V P+ T
Sbjct: 219 VDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNC 278
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT---LLYRLSNNSMASEAAAILRKMG 177
L+HG L K E++ E K C T LL L NN EA M
Sbjct: 279 LIHGY---LSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMI 335
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
+G P + + + T L+E +L+ ++ G+ P + ++ A K
Sbjct: 336 RKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMID 395
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E N + + L +V ++ +ID CK+ +D A +M + +APN+ FN+L+
Sbjct: 396 EAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLV 455
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G C + K +E +L G +PD FN+++ LC + A + M G
Sbjct: 456 YGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTR 515
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P+ I+Y LI C +G + + + M + + PD +T+N L+ +CR +I+ A
Sbjct: 516 PDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGV 575
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F ML G+ P +YS ++ L + RF EAK+ +L+M +G + + N+IL L +
Sbjct: 576 FREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSK 635
Query: 478 QGRFEEAHDIVKT--SKERGISFKSF 501
+EA + ++ SK+ + +F
Sbjct: 636 NNCVDEAFKLFQSLCSKDFQLEITTF 661
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 171/407 (42%), Gaps = 8/407 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP ++N + A K ID A F +M PD + LI +C++G VD+A
Sbjct: 373 GLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDA 432
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ QM G APN++ + L+ G C + + M + + P+ +++
Sbjct: 433 VLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCN 492
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS---EAAAILRKMGDRGY 181
+ KA + LI MER ++ T L + + + EAA L M G
Sbjct: 493 LCTKGQVMKA-QRLIDLMERVGTRPDVISYTTL--IGGHCLVGRIDEAAKSLDVMLSVGL 549
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG-D 240
P+ T++ + +++ G+ ++ G+ P TY ++ L+ R E +
Sbjct: 550 KPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKE 609
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
YLN + + N+ YN++++ K N +D A ++ + + +D + TFN +I
Sbjct: 610 LYLNMITSGK-QWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGAL 668
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K L + G PD FT+ + + L E+ D S M + G PN+
Sbjct: 669 FKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNS 728
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
N L+R L GD+ R+ K+ S + T LI R
Sbjct: 729 RMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSR 775
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 121/251 (48%), Gaps = 4/251 (1%)
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
++ ++ +Y+++I CFC++ ++ + N + N L+ G C + +
Sbjct: 89 KVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREA 148
Query: 310 RELLVMLL-ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW---GVPPNTITYNI 365
++L+ + E G PD ++N+++ C R E+AL+ L M + PPN ++Y
Sbjct: 149 MDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAT 208
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+I G V ++ LF +M I P++ T+ +I C+ +++AE F M+ G
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
++PDN +Y+ LI + G++ E + M +G PD YT +L L GR EA
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328
Query: 486 DIVKTSKERGI 496
+ +GI
Sbjct: 329 FFFDSMIRKGI 339
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 126/308 (40%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +N ++ L + A M +PD +Y LI G C +G +DEA
Sbjct: 478 GIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEA 537
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + M +G P+ +TY L+ G+C A R+ + + V M + P T +++HG
Sbjct: 538 AKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHG 597
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F +A EL + + + N +L LS N+ EA + + + + + E
Sbjct: 598 LFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLE 657
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+TF+ + L + + T G+ P TY L+ E L + G E D +
Sbjct: 658 ITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFS 717
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K N N ++ + RA ++ +++ + T LIS +D
Sbjct: 718 AMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDE 777
Query: 305 EVHKTREL 312
H L
Sbjct: 778 YHHHATSL 785
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS-------LRLFQKMQAD---R 390
+DAL ++ P + I +N L+ ++ + S + LF +M + +
Sbjct: 30 LDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
++PD+ T++ LI FCRM ++E F +L G R +N + L+K L + R EA
Sbjct: 90 VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149
Query: 451 QTFLS-MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+ M + GC PD + N +L+ + R EEA +++
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELL 188
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 76/171 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G + +YN +++ L K+N +D A+ FQ + + + T+NI+I + + G ++A
Sbjct: 618 GKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDA 677
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L + G P+V+TY ++ + + E + M++ PN + +LV
Sbjct: 678 MHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRR 737
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
+ D +A L + E+ + L+ LS + A ++ K
Sbjct: 738 LLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEK 788
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 90/227 (39%), Gaps = 35/227 (15%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P YN ++ ++ ID AY F++M + P TY+ ++HG+ E
Sbjct: 547 VGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSE 606
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L M G N++ Y I+++G V E F++ + + ++ T ++
Sbjct: 607 AKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIG 666
Query: 124 GVFR--------------------------CLDPH--------KAFELLIRFMEREPLT- 148
+F+ CL + F+ L ME+ T
Sbjct: 667 ALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTP 726
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCL 195
+ N L+ RL + + A A L K+ ++ + E+ST ++ L
Sbjct: 727 NSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLL 773
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 243/490 (49%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P +N ++ +LVKS Q+M KP+ NILI+ C++G++ A
Sbjct: 82 TPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFS 141
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+ ++ +GY P+ T+T LI G C ++ + F + + ++ + +L+HG+
Sbjct: 142 VFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLC 201
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + A +LL R ++ NT++ + + +EA + +M +G P+
Sbjct: 202 KVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVV 261
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ ++ LN+ + + I +KP T+ +L+ A K G+ EG + +
Sbjct: 262 TYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM 321
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K + N +YN ++D +C V +++A I M + P++ +++ +I+G CK +
Sbjct: 322 MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF 381
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ L + PD T++S+ID L ++ R AL + +M + GVPP TYN +
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSI 441
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ +LC I V +++ L K++ I P++YT++ LI+ C+ K+E A K F +L G
Sbjct: 442 LDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGH 501
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+ +Y+ +I+ G F+EA ME NGC PD+ T +I+ +L ++ + A
Sbjct: 502 NLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEK 561
Query: 487 IVKTSKERGI 496
+++ RG+
Sbjct: 562 LLREMIARGV 571
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 159/324 (49%), Gaps = 8/324 (2%)
Query: 181 YLPESST------FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
++P SS+ + T T + D+++ + + ++R P + ++ +L K+
Sbjct: 40 FIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKS- 98
Query: 235 RDVEGDRYLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
+ YL+ + R + N+ + N++I+CFC++ ++ A + ++ P+ +TF
Sbjct: 99 KHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITF 158
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
TLI G C ++ + ++ GF D+ ++ ++I LC+ ALD L +
Sbjct: 159 TTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDG 218
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
V PN + YN +I S+C + V + LF +M + ISPD+ T++ALI FC + K+
Sbjct: 219 NLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLND 278
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A F M+ ++PD ++++ L+ A K G+ E K F M + G P+ T N +++
Sbjct: 279 AIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMD 338
Query: 474 TLVQQGRFEEAHDIVKTSKERGIS 497
+A I T + G++
Sbjct: 339 GYCLVKEVNKAKSIFNTMAQGGVN 362
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 163/392 (41%), Gaps = 70/392 (17%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ +YN +ID++ K ++ A+ F +M PD TY+ LI G C +G +++A+
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAI 280
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L +M P+VYT+ IL++ FC ++ E V ++M ++ + PN T SL+ G
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
CL ++A +I M G P+
Sbjct: 341 --CLVKE---------------------------------VNKAKSIFNTMAQGGVNPDI 365
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
++ + +E + ++ + P TY L++ L K+GR + ++
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + + +YN ++D CK++ +D+A + +++D+ I PN+ T++ LI G C+ +
Sbjct: 426 MHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGK 485
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS---------------- 349
+ R++ LL G + T+ MI C F +AL LS
Sbjct: 486 LEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545
Query: 350 -------------------EMVEWGVPPNTIT 362
EM+ GV P I
Sbjct: 546 IILSLFKKDENDMAEKLLREMIARGVRPRQIA 577
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/479 (27%), Positives = 238/479 (49%), Gaps = 1/479 (0%)
Query: 18 DALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRI-GVVDEALRLVKQMEGLGY 76
DA +ID A F M + P +N L+ I R+ D + L KQME G
Sbjct: 63 DASSSFRNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGL 122
Query: 77 APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFE 136
+PN T ILI+ FC + V F VL + + + P T +L++G+ + + +A E
Sbjct: 123 SPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALE 182
Query: 137 LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLV 196
L + R T++ L + AA +++KMG+ G P+ T+ + L
Sbjct: 183 LFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLC 242
Query: 197 TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVN 256
+NE I +G+ P +Y L++ L R E LN + ++ ++
Sbjct: 243 KDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIV 302
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+++++ID FCK + A + + M + + PN++T+N+L+ G+ EV + R+L ++
Sbjct: 303 TFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVM 362
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
+ G KPD F+++ +I+ C R ++A +EM+ G+ PNT++Y LI + C +G +
Sbjct: 363 ITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKL 422
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+ LF+ M + PD+ T++ L++ FC+ + KA + F +M L+P+ Y+ L
Sbjct: 423 REARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTIL 482
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
I ++ KSG + A++ F + +G PD I+ L ++G +EA + + +E G
Sbjct: 483 IDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDG 541
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 209/465 (44%), Gaps = 35/465 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ + +I+ L K+ A F M C+PD +TY +I+G+C++G
Sbjct: 155 LGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAA 214
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+K+M +G P+V TY+ LID C + V E + MK + + P + SL+
Sbjct: 215 AAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQ 274
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G L + S EA+A+L +M +P
Sbjct: 275 G-----------------------------------LCSFSRWKEASAMLNEMTSLNIMP 299
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF + ++ E G+L T + GV+P TY LM VE +
Sbjct: 300 DIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLF 359
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +V SY+++I+ +C V +D A ++ EM + + PN V++ TLI C+
Sbjct: 360 DVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQL 419
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + REL + G+ PD T++ +++ C+ A M + PN + Y
Sbjct: 420 GKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMY 479
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
ILI S+C G++ + +LF ++ + PD+ + +I C+ +++A +AF M
Sbjct: 480 TILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEE 539
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
G P+ FSY+ +I+ ++ A Q M G D T+
Sbjct: 540 DGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGTT 584
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 123/255 (48%), Gaps = 1/255 (0%)
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKV-NMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
NH+ + + + +N ++ ++ D + ++M ++PN T N LI+ C
Sbjct: 78 FNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFC 137
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
V +L +++ G +P TF ++I+ LC+A F AL+ +MV G P+
Sbjct: 138 LMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVY 197
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY +I LC +G+ A + L +KM PD+ T++ LI S C+ + +A F M
Sbjct: 198 TYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYM 257
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G+ P SY++LI+ L R+ EA M PD T +L+++ ++G
Sbjct: 258 KAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNV 317
Query: 482 EEAHDIVKTSKERGI 496
EA ++KT E G+
Sbjct: 318 LEAQGVLKTMTEMGV 332
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW-GVPPNTITYNILIRSLCAIGDVARSLR 381
P FN ++ + R ++ DA+ LS+ +E G+ PNT T NILI C + V
Sbjct: 88 PCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFS 147
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
+ K+ + P I TF LI C+ + +A + F M+ G +PD ++Y+ +I L
Sbjct: 148 VLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLC 207
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
K G A M + GC PD T + ++++L + EA DI K +GIS
Sbjct: 208 KMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGIS 263
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 239/503 (47%), Gaps = 18/503 (3%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ A+V+ DL +Q+M Q + D +++ ILI C + AL
Sbjct: 79 PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVHGVF 126
++ LG P+V T+T L+ G C RV+E + +C P+ T +L++G+
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF-----HQICRPDVLTFTTLMNGLC 193
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL-PES 185
R +A LL R +E ++ T + + A +LRKM + ++ P
Sbjct: 194 REGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNV 253
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+ + L +++ + +G+ P TY ++ +GR R L
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE 313
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + ++ NV +YN +I+ F K A E+ EM R I PN +T+N++I G CK
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ ++ ++ G PD FTF ++ID C A R +D ++ L EM G+ NT+TYN
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL- 424
LI C +GD+ +L L Q+M + + PDI T N L+ C K++ A + F +M
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493
Query: 425 ----------GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
G+ PD +Y+ LI LI G+F EA++ + M G PD+ T + +++
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553
Query: 475 LVQQGRFEEAHDIVKTSKERGIS 497
L +Q R +EA + + + S
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFS 576
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 222/489 (45%), Gaps = 12/489 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P + +++ L + + A +M + +PD+ TY + G+C++G AL L
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239
Query: 68 VKQMEGLGY-APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+++ME + + PNV Y+ +IDG C R ++ + M+++ + PN T ++ G
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
A LL +ER+ + N L+ EAA + +M RG +P +
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + L+ + +G P T+ L++ A R +G L+ +
Sbjct: 360 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ LV+N +YN +I FC V ++ A ++ ++M + P++VT NTL+ G C + ++
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 479
Query: 307 HKTRELLVMLLEC-----------GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
E+ + + G +PD T+N +I L +F +A + EM G
Sbjct: 480 KDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG 539
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ P+TITY+ +I LC + + ++F M + SP++ TFN LI +C+ +++
Sbjct: 540 IVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGL 599
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ F M G+ D Y LI K G + A F M +G PD+ T +L
Sbjct: 600 ELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF 659
Query: 476 VQQGRFEEA 484
+ E A
Sbjct: 660 WSKEELERA 668
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 127/506 (25%), Positives = 228/506 (45%), Gaps = 18/506 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P + ++ L + + A F Q+ C+PD T+ L++G+CR G V E
Sbjct: 145 LGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVE 200
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE-RNVCPNEATVRSLV 122
A+ L+ +M G P+ TY +DG C +L M+E ++ PN +++
Sbjct: 201 AVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAII 260
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + + L I ++ + N ++ + S A +L++M +R
Sbjct: 261 DGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKIS 320
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-DVEGDR 241
P T++ + V E + D + RG+ P TY +++ K R D D
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 380
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ K +V ++ +ID +C +D E+ EM R + N VT+NTLI G C
Sbjct: 381 FYLMATKG-CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 439
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW------- 354
+++ +L ++ G PD T N+++D LC + +DAL+ M +
Sbjct: 440 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 499
Query: 355 ----GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
GV P+ +TYNILI L G + L+++M I PD T++++I C+ ++
Sbjct: 500 HPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 559
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+++A + F SM + P+ +++ LI K+GR D+ + F M + G D+
Sbjct: 560 LDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT 619
Query: 471 ILETLVQQGRFEEAHDIVKTSKERGI 496
++ + G A DI + G+
Sbjct: 620 LIYGFRKVGNINGALDIFQEMISSGV 645
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 179/382 (46%), Gaps = 24/382 (6%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP+ YNA+I+A VK A + +M P+ TYN +I G C+ +D A
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M G +P+V+T+T LIDG+C AKR+ + +L M R + N T +L+HG
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 438
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
D + A +L + + + CNTLL L +N +A + + M +
Sbjct: 439 CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM-------QK 491
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
S D LD + GV+P TY +L+ L G+ +E +
Sbjct: 492 SKMD---------LDASHPF--------NGVEPDVLTYNILICGLINEGKFLEAEELYEE 534
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ +V + +Y+ +ID CK + +D AT++ M + +PN+VTFNTLI+G+CK
Sbjct: 535 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGR 594
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V EL + G D + ++I + ALD EM+ GV P+TIT
Sbjct: 595 VDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRN 654
Query: 366 LIRSLCAIGDVARSLRLFQKMQ 387
++ + ++ R++ + + +Q
Sbjct: 655 MLTGFWSKEELERAVAMLEDLQ 676
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 195/424 (45%), Gaps = 19/424 (4%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ +Y+A+ID L K ++ F +M P+ TYN +I G C G A
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
RL+++M +PNV TY LI+ F + E + + M R + PN T S++ G
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG- 367
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F D A E + M + + + TL+ + +L +M RG +
Sbjct: 368 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 427
Query: 185 SSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL------------ 230
+ T++ + CLV DLN + I GV P T L++ L
Sbjct: 428 TVTYNTLIHGFCLVG--DLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEM 485
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
+KA + + D +H F + + +V +YN++I A E+ EM R I P+
Sbjct: 486 FKAMQKSKMDLDASHPF-NGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 544
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
+T++++I G CK + + + ++ V + F P+ TFN++I+ C+A R +D L+ E
Sbjct: 545 ITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCE 604
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M G+ + I Y LI +G++ +L +FQ+M + + PD T ++ F +
Sbjct: 605 MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEE 664
Query: 411 IEKA 414
+E+A
Sbjct: 665 LERA 668
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 142/361 (39%), Gaps = 46/361 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+T YN++ID K + +D A F M+ C PD FT+ LI G C +D+
Sbjct: 353 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDG 412
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M G N TY LI GFC + + + M VCP+ T
Sbjct: 413 MELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT------- 465
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD------ 178
CNTLL L +N +A + + M
Sbjct: 466 ----------------------------CNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 497
Query: 179 -----RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
G P+ T++ + L+ E + + RG+ P TY +++ L K
Sbjct: 498 ASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 557
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
R E + + NV ++N +I+ +CK +D E+ EM R I + + +
Sbjct: 558 SRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIY 617
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
TLI G K ++ ++ ++ G PD T +M+ E A+ L ++
Sbjct: 618 ITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQR 677
Query: 354 W 354
+
Sbjct: 678 Y 678
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G+ P YN +I L+ A +++M PD TY+ +I G+C+ +D
Sbjct: 502 FNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 561
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA ++ M ++PNV T+ LI+G+C A RV + + M R + + +L+
Sbjct: 562 EATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLI 621
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
+G + + + A ++ + + +L + A A+L +
Sbjct: 622 YGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 239/503 (47%), Gaps = 18/503 (3%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ A+V+ DL +Q+M Q + D +++ ILI C + AL
Sbjct: 79 PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVHGVF 126
++ LG P+V T+T L+ G C RV+E + +C P+ T +L++G+
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF-----HQICRPDVLTFTTLMNGLC 193
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL-PES 185
R +A LL R +E ++ T + + A +LRKM + ++ P
Sbjct: 194 REGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNV 253
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+ + L +++ + +G+ P TY ++ +GR R L
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE 313
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + ++ NV +YN +I+ F K A E+ EM R I PN +T+N++I G CK
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ ++ ++ G PD FTF ++ID C A R +D ++ L EM G+ NT+TYN
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL- 424
LI C +GD+ +L L Q+M + + PDI T N L+ C K++ A + F +M
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493
Query: 425 ----------GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
G+ PD +Y+ LI LI G+F EA++ + M G PD+ T + +++
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553
Query: 475 LVQQGRFEEAHDIVKTSKERGIS 497
L +Q R +EA + + + S
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFS 576
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 222/489 (45%), Gaps = 12/489 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P + +++ L + + A +M + +PD+ TY + G+C++G AL L
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239
Query: 68 VKQMEGLGY-APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+++ME + + PNV Y+ +IDG C R ++ + M+++ + PN T ++ G
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
A LL +ER+ + N L+ EAA + +M RG +P +
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + L+ + +G P T+ L++ A R +G L+ +
Sbjct: 360 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ LV+N +YN +I FC V ++ A ++ ++M + P++VT NTL+ G C + ++
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 479
Query: 307 HKTRELLVMLLEC-----------GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
E+ + + G +PD T+N +I L +F +A + EM G
Sbjct: 480 KDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG 539
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ P+TITY+ +I LC + + ++F M + SP++ TFN LI +C+ +++
Sbjct: 540 IVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGL 599
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ F M G+ D Y LI K G + A F M +G PD+ T +L
Sbjct: 600 ELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF 659
Query: 476 VQQGRFEEA 484
+ E A
Sbjct: 660 WSKEELERA 668
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 127/506 (25%), Positives = 228/506 (45%), Gaps = 18/506 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P + ++ L + + A F Q+ C+PD T+ L++G+CR G V E
Sbjct: 145 LGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVE 200
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE-RNVCPNEATVRSLV 122
A+ L+ +M G P+ TY +DG C +L M+E ++ PN +++
Sbjct: 201 AVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAII 260
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + + L I ++ + N ++ + S A +L++M +R
Sbjct: 261 DGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKIS 320
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-DVEGDR 241
P T++ + V E + D + RG+ P TY +++ K R D D
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 380
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ K +V ++ +ID +C +D E+ EM R + N VT+NTLI G C
Sbjct: 381 FYLMATKG-CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 439
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW------- 354
+++ +L ++ G PD T N+++D LC + +DAL+ M +
Sbjct: 440 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 499
Query: 355 ----GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
GV P+ +TYNILI L G + L+++M I PD T++++I C+ ++
Sbjct: 500 HPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 559
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+++A + F SM + P+ +++ LI K+GR D+ + F M + G D+
Sbjct: 560 LDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT 619
Query: 471 ILETLVQQGRFEEAHDIVKTSKERGI 496
++ + G A DI + G+
Sbjct: 620 LIYGFRKVGNINGALDIFQEMISSGV 645
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 179/382 (46%), Gaps = 24/382 (6%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP+ YNA+I+A VK A + +M P+ TYN +I G C+ +D A
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M G +P+V+T+T LIDG+C AKR+ + +L M R + N T +L+HG
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 438
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
D + A +L + + + CNTLL L +N +A + + M +
Sbjct: 439 CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM-------QK 491
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
S D LD + GV+P TY +L+ L G+ +E +
Sbjct: 492 SKMD---------LDASHPF--------NGVEPDVLTYNILICGLINEGKFLEAEELYEE 534
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ +V + +Y+ +ID CK + +D AT++ M + +PN+VTFNTLI+G+CK
Sbjct: 535 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGR 594
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V EL + G D + ++I + ALD EM+ GV P+TIT
Sbjct: 595 VDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRN 654
Query: 366 LIRSLCAIGDVARSLRLFQKMQ 387
++ + ++ R++ + + +Q
Sbjct: 655 MLTGFWSKEELERAVAMLEDLQ 676
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 195/424 (45%), Gaps = 19/424 (4%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ +Y+A+ID L K ++ F +M P+ TYN +I G C G A
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
RL+++M +PNV TY LI+ F + E + + M R + PN T S++ G
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG- 367
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F D A E + M + + + TL+ + +L +M RG +
Sbjct: 368 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 427
Query: 185 SSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL------------ 230
+ T++ + CLV DLN + I GV P T L++ L
Sbjct: 428 TVTYNTLIHGFCLVG--DLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEM 485
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
+KA + + D +H F + + +V +YN++I A E+ EM R I P+
Sbjct: 486 FKAMQKSKMDLDASHPF-NGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 544
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
+T++++I G CK + + + ++ V + F P+ TFN++I+ C+A R +D L+ E
Sbjct: 545 ITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCE 604
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M G+ + I Y LI +G++ +L +FQ+M + + PD T ++ F +
Sbjct: 605 MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEE 664
Query: 411 IEKA 414
+E+A
Sbjct: 665 LERA 668
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 141/358 (39%), Gaps = 46/358 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+T YN++ID K + +D A F M+ C PD FT+ LI G C +D+
Sbjct: 353 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDG 412
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M G N TY LI GFC + + + M VCP+ T
Sbjct: 413 MELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT------- 465
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD------ 178
CNTLL L +N +A + + M
Sbjct: 466 ----------------------------CNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 497
Query: 179 -----RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
G P+ T++ + L+ E + + RG+ P TY +++ L K
Sbjct: 498 ASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 557
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
R E + + NV ++N +I+ +CK +D E+ EM R I + + +
Sbjct: 558 SRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIY 617
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
TLI G K ++ ++ ++ G PD T +M+ E A+ L ++
Sbjct: 618 ITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G+ P YN +I L+ A +++M PD TY+ +I G+C+ +D
Sbjct: 502 FNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 561
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA ++ M ++PNV T+ LI+G+C A RV + + M R + + +L+
Sbjct: 562 EATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLI 621
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
+G + + + A ++ + + +L + A A+L +
Sbjct: 622 YGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 243/495 (49%), Gaps = 13/495 (2%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ + V+ A N ID A + M+ C P+ Y LIH + + V+EAL
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 272
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+L+++M +G P+ T+ +I G C R+ E +++ M R P++ T L++G+
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDRGYLPE 184
+ A +L R P + ++ NTL++ + +A A+L M G +P+
Sbjct: 333 CKIGRVDAAKDLFYRI----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 388
Query: 185 SSTFDYTVTCL----VTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
T++ + + GL L +L +G KP +Y +L++ K G+ E
Sbjct: 389 VCTYNSLIYGYWKEGLVGLALE----VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
LN + D L N +N +I FCK + + A EI REM + P++ TFN+LISG
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ E+ LL ++ G + T+N++I+ R ++A ++EMV G P +
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITYN LI+ LC G+V ++ LF+KM D +P + N LI CR +E+A +
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ G PD ++++LI L ++GR ++ F ++ G PD+ T N ++ L + G
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF 684
Query: 481 FEEAHDIVKTSKERG 495
+A ++ E G
Sbjct: 685 VYDACLLLDEGIEDG 699
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/490 (28%), Positives = 224/490 (45%), Gaps = 5/490 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ + YN V++ LV N +A F M + P FT+ +++ C + +D AL L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ M G PN Y LI RV E ++LE M P+ T ++ G+ +
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
++A +++ R + R + L+ L A + ++ PE
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVI 355
Query: 188 FDYTVTCLVTGLDLNETCGIL-DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
F+ + VT L++ +L D G+ P TY L+ +K G L+ +
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
NV SY +++D FCK+ +D A + EM + PN V FN LIS CK+ +
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ E+ + G KPD +TFNS+I LC + AL L +M+ GV NT+TYN L
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I + G++ + +L +M D T+N+LI+ CR +++KA F ML G
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P N S + LI L +SG +EA + M G PD T N ++ L + GR E+
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 487 IVKTSKERGI 496
+ + + GI
Sbjct: 656 MFRKLQAEGI 665
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 214/481 (44%), Gaps = 48/481 (9%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
+G P +N VI L K + I+ A +M + PD TY L++G+C+IG VD
Sbjct: 280 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL-EIMKERNVCPNEATVRSL 121
A L ++ P + + LI GF R+ + VL +++ + P+ T SL
Sbjct: 340 AAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++G ++ + A +L M ++G
Sbjct: 396 IYGYWK-----------------------------------EGLVGLALEVLHDMRNKGC 420
Query: 182 LPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
P Y+ T LV G ++E +L+ G+KP + L+ A K R
Sbjct: 421 KPNV----YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIP 476
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E + + +V ++N +I C+V+ + A + R+M + N VT+NTLI
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
+ + E+ + R+L+ ++ G D+ T+NS+I LCRA + A +M+ G
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P+ I+ NILI LC G V ++ ++M +PDI TFN+LI CR +IE
Sbjct: 597 PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTM 656
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F + G+ PD +++ L+ L K G +A ++G P+ T +++L++++
Sbjct: 657 FRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIP 716
Query: 478 Q 478
Q
Sbjct: 717 Q 717
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 184/408 (45%), Gaps = 38/408 (9%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD-QCKPDRFTYNILIHGICRIGVVDEALR 66
P ++N +I V +D A M PD TYN LI+G + G+V AL
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++ M G PNVY+YTIL+DGFC ++ E + VL M + PN
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV---------- 460
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
F LI +E +R+ EA I R+M +G P+
Sbjct: 461 -------GFNCLISAFCKE------------HRIP------EAVEIFREMPRKGCKPDVY 495
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH- 245
TF+ ++ L ++ +L I GV TY L+ A + G E + +N
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
VF+ + + +YN +I C+ +D+A + +M AP+ ++ N LI+G C+
Sbjct: 556 VFQGSPLDEI-TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 614
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V + E ++ G PD TFNS+I+ LCRA R ED L ++ G+PP+T+T+N
Sbjct: 615 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
L+ LC G V + L + D P+ T++ L+QS +++
Sbjct: 675 LMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 158/340 (46%), Gaps = 10/340 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ GI P YN++I K + LA M CKP+ ++Y IL+ G C++G
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK 439
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+DEA ++ +M G PN + LI FC R+ E + M + P+ T S
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSM-----ASEAAAILRK 175
L+ G+ + A LL R+ +++ +V NT+ Y N+ EA ++ +
Sbjct: 500 LISGLCEVDEIKHALWLL-----RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
M +G + T++ + L ++++ + + ++ G P + +L+ L ++G
Sbjct: 555 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 614
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
E + + ++ ++N +I+ C+ ++ + R+++ I P+ VTFNT
Sbjct: 615 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
L+S CK V+ LL +E GF P+ T++ ++ +
Sbjct: 675 LMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 86/181 (47%)
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
TR +L M +P ++N +++ L + + A + +M+ +PP T+ ++
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 223
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+++ CA+ ++ +L L + M P+ + LI S + N++ +A + M +G
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
PD +++ +I L K R +EA + M G PD T ++ L + GR + A D
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 487 I 487
+
Sbjct: 344 L 344
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%)
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P +YN+++ L + + +F M + +I P ++TF ++++FC +N+I+ A
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
M G P++ Y LI +L K R +EA Q M GC PD+ T N ++ L +
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 478 QGRFEEAHDIVKTSKERGIS 497
R EA +V RG +
Sbjct: 300 FDRINEAAKMVNRMLIRGFA 319
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 241/490 (49%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P +N ++D+ K A ++ + +PD T NILI+ C +G +
Sbjct: 56 TPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++ ++ GY P+ T+T LI G C +V + + + + + ++ + +L++GV
Sbjct: 116 VLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVC 175
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ D A +L+ + R + NT++ L + SEA + +M +G +
Sbjct: 176 KIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVV 235
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L E G+L+ + + + P TY +L++AL K G+ E L +
Sbjct: 236 TYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVM 295
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K + +V +Y+ ++D + V + +A + M + P++ ++ LI+G CK+ V
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMV 355
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ L + + P T++S+ID LC++ R D + EM + G+P N ITYN L
Sbjct: 356 DEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSL 415
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I LC G + R++ LF KM+ I P +TF L+ C+ +++ A++AF +LT G
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGY 475
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
D + Y+ +I K G +EA ME+NGC P++ T ++I+ L ++ ++A
Sbjct: 476 HLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEK 535
Query: 487 IVKTSKERGI 496
+++ RG+
Sbjct: 536 LLRQMICRGL 545
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 202/452 (44%), Gaps = 35/452 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T + +I L ++ A ++ K D+ +Y LI+G+C+IG A
Sbjct: 124 GYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGA 183
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++LV++++G PNV Y +ID C + V+E + + M + + + T +L++G
Sbjct: 184 IKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYG 243
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
C+ S EA +L +M + P
Sbjct: 244 F--CIA---------------------------------SKLKEAIGLLNEMVLKTINPN 268
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ V L + E +L +K VKP TY LM+ + + N
Sbjct: 269 VYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFN 328
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +V+SY ++I+ FCK M+D A + +EM +++ P +VT+++LI G CK
Sbjct: 329 AMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSG 388
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +L+ + + G + T+NS+ID LC+ + A+ ++M + G+ P + T+
Sbjct: 389 RISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFT 448
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
IL+ LC G + + FQ + D+Y +N +I C+ +E+A M
Sbjct: 449 ILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEEN 508
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
G P+ ++ +I AL K D+A++ M
Sbjct: 509 GCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 163/332 (49%), Gaps = 2/332 (0%)
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
++L K+ RGY P + TF + L +N+ D + +G+K +Y L+ +
Sbjct: 115 SVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGV 174
Query: 231 YKAGRDVEGDRYLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
K G D G L RL NV YN +ID CK ++ A + EM + I+ +
Sbjct: 175 CKIG-DTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISAD 233
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+VT+ TLI G C +++ + LL ++ P+ +T+N ++D LC+ + ++A + L+
Sbjct: 234 VVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLA 293
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
M++ V P+ ITY+ L+ + ++ ++ +F M ++PD++++ LI FC+
Sbjct: 294 VMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNK 353
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
+++A F M + P +YS+LI L KSGR M G + T N
Sbjct: 354 MVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYN 413
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+++ L + G + A + K++GI SF
Sbjct: 414 SLIDGLCKNGHLDRAIALFNKMKDQGIRPCSF 445
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 8/220 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S +G++P Y +I+ K+ +D A F++M P TY+ LI G+C+ G
Sbjct: 330 MSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ L+ +M G NV TY LIDG C + + MK++ + P T
Sbjct: 390 ISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTI 449
Query: 121 LVHGV---FRCLDPHKAFE-LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
L+ G+ R D +AF+ LL + + N ++ + EA +L KM
Sbjct: 450 LLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKY----NVMINGHCKQGLLEEALTMLSKM 505
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
+ G +P + TFD + L + ++ +L I RG+
Sbjct: 506 EENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 10/153 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + YN++ID L K+ +D A F +M +P FT+ IL+ G+C+ G + +A
Sbjct: 404 GIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDA 463
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + GY +VY Y ++I+G C + E +L M+E PN T +++
Sbjct: 464 QEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINA 523
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL 157
+F+ + KA E L ++++C LL
Sbjct: 524 LFKKDENDKA----------EKLLRQMICRGLL 546
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 72/175 (41%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P FN ++D + + A+ + G+ P+ IT NILI C +G + +
Sbjct: 57 PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
K+ P TF LI+ C ++ KA +L G++ D SY LI + K
Sbjct: 117 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 176
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G A + ++ P+ N I++ L + EA+ + +GIS
Sbjct: 177 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGIS 231
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 66/153 (43%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+DA+ + M+ P I +N ++ S I + ++ L +++ I PD+ T N L
Sbjct: 41 DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNIL 100
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I FC M +I +L G +P +++ LIK L G+ ++A + G
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGI 160
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
D + ++ + + G A +V+ R
Sbjct: 161 KFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGR 193
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 53/127 (41%)
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
+I +V ++ F +M R +P I FN ++ SF ++ A + G++PD
Sbjct: 36 SIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLI 95
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
+ + LI G+ + + G P + T +++ L +G+ +A
Sbjct: 96 TLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKL 155
Query: 492 KERGISF 498
+GI F
Sbjct: 156 LAQGIKF 162
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 237/486 (48%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
+Y + + + + A F++M C+P +YN +++ + G +A ++ +M
Sbjct: 78 VYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRM 137
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
+ +G P+VYT+TI I FC KR R+L M + N ++V G +
Sbjct: 138 KNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYR 197
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
+A+EL + N LL+ L E+ +L K+ +G TF+
Sbjct: 198 VEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIF 257
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ L L+ +LD+ I+ G+ P TY L+ L K VE ++YL+ + L
Sbjct: 258 IQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGL 317
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+ +YN +ID +CK+ M+ A +I + + P+ T+ +LI+G C++ E+ +
Sbjct: 318 EPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALA 377
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
L L G KP +N +I LC+ AL ++EM E G + TYN++I LC
Sbjct: 378 LFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLC 437
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
+G V+ + L A PD++TFN LI +C+ K+E + M + G+ PD
Sbjct: 438 KMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVI 497
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
+Y++++ L K+ + ++ +TF +M + GC P+ T N++ E+L + G+ EA D+V
Sbjct: 498 TYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEI 557
Query: 492 KERGIS 497
+GI+
Sbjct: 558 LNKGIT 563
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 133/520 (25%), Positives = 232/520 (44%), Gaps = 36/520 (6%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y V+ + N AY F M PD T+N L+H +C+ G V E+ RL+ ++
Sbjct: 184 YCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVL 243
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G N++T+ I I G C ++ +L+ + + P+ T +L+ G+ + +
Sbjct: 244 KKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVV 303
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A + L + + NTL+ M A IL+ +G++P+ T+ +
Sbjct: 304 EAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLI 363
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L +++ + + + +G+KP Y +L++ L + G ++ + +N + ++
Sbjct: 364 NGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCS 423
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
S++ +YN+VI+ CK+ + A + + + P++ TFNTLI G+CK ++ T ++
Sbjct: 424 SDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQI 483
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L + G PD T+NS+++ L +A + ED ++ MVE G PN ITYNIL SLC
Sbjct: 484 LNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCK 543
Query: 373 IGDVARSLRLFQKMQADRISPDIY------------------------------------ 396
G V +L L ++ I+PD
Sbjct: 544 AGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTA 603
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
T+N +I +F + EK F M G PD ++Y +I +G D + L M
Sbjct: 604 TYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEM 663
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ G P T ++ L Q R EA DI+ GI
Sbjct: 664 IEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGI 703
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 163/357 (45%), Gaps = 34/357 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ LYN +I L + I A +MS + C D +TYN++I+G+C++G V +A
Sbjct: 386 GLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDA 445
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ GY P+V+T+ LIDG+C ++ ++L M V P+ T S+++G
Sbjct: 446 NNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNG 505
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + E +E+ + K+ N L L +EA ++ ++ ++G P+
Sbjct: 506 LSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPD 565
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ +F ++ DL + Y+ R + G++Y
Sbjct: 566 TVSFATIISGFANNGDL--------------------------KGAYQLFRRM-GEQY-- 596
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
++ +YN++I+ F + + ++ EM AP+ T+ +I G C
Sbjct: 597 -----KVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITG 651
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ L+ ++E GF P TF +I+CLC HR +A+D + MV G+ P +
Sbjct: 652 NTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/507 (26%), Positives = 244/507 (48%), Gaps = 36/507 (7%)
Query: 25 SIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRI-GVVDEALRLVKQMEGLGYAPNVYTY 83
+ID A F M + +P +N L+ I ++ D + L KQME G +P+ YT
Sbjct: 101 NIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTL 160
Query: 84 TILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME 143
+LI+ F +RV F VL + + + T +L++G+ + +A EL +
Sbjct: 161 HMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVA 220
Query: 144 REPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
R T++ L AA + RKMG+ G P+ T+ + L +NE
Sbjct: 221 RGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNE 280
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
I +G+ P TY L++ L R E LN + ++ N+ +++++I+
Sbjct: 281 ALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLIN 340
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
FCK + A + + M + + PN+VT+++L++G+ AEV + R+L +++ G KP
Sbjct: 341 IFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKP 400
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD-------- 375
D F++N +I+ C+A R +A +EM+ G+ P+ ++YN LI LC +G
Sbjct: 401 DVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLF 460
Query: 376 ---------------------------VARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
+A++ RLF+ MQ+ + P++ +N LI + C+
Sbjct: 461 KNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKS 520
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+++A K F + GL+P+ Y+ +I L K G DEA + F +ME++GC P+ ++
Sbjct: 521 RNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSY 580
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERG 495
N+I+ +Q A ++ +E+G
Sbjct: 581 NVIIRGFLQHKDESRAVQLIGEMREKG 607
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 209/465 (44%), Gaps = 35/465 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ + +N +I+ L K A F M +PD TY +I+G+C+IG
Sbjct: 186 LGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVA 245
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L ++M G P+V TY+ +ID C +RV E + MK + + PN T SL+
Sbjct: 246 AAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQ 305
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ CN +R EA+A+L +M +P
Sbjct: 306 GL---------------------------CNFSRWR--------EASAMLNEMMSLNIMP 330
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
TF + ++ E G+L T + GV+P TY LM VE +
Sbjct: 331 NIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLF 390
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +V SYN++I+ +CK + A ++ EM + + P++V++NTLI G C+
Sbjct: 391 DVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQL 450
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + +L +L G PD T++ ++D C+ A M + PN + Y
Sbjct: 451 GRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMY 510
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NILI ++C ++ + +LF ++ + P++ + +I C+ +++A +AF +M
Sbjct: 511 NILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEE 570
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
G P+ FSY+ +I+ ++ A Q M + G D T+
Sbjct: 571 DGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVATT 615
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 126/256 (49%), Gaps = 1/256 (0%)
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKV-NMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
Y NH+ + + +N ++ K+ + D + ++M ++P+ T + LI+
Sbjct: 108 YFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCF 167
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ V +L +++ G + TFN++I+ LC+ +F A++ +MV G P+
Sbjct: 168 FQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDV 227
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
TY +I LC IG+ + LF+KM PD+ T++ +I S C+ ++ +A F
Sbjct: 228 HTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSY 287
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G+ P+ F+Y++LI+ L R+ EA M P+ T +L++ ++G
Sbjct: 288 MKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGN 347
Query: 481 FEEAHDIVKTSKERGI 496
EA ++KT E G+
Sbjct: 348 VFEARGVLKTMTEMGV 363
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 1/177 (0%)
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW-GVPPNTITYNILIRSLCAIGDVARSL 380
+P FN ++ + + + DA+ LS+ +E G+ P+T T ++LI + V
Sbjct: 118 RPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGF 177
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
+ K+ + I TFN LI C++ K +A + F M+ G +PD +Y+ +I L
Sbjct: 178 SVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGL 237
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
K G A F M + GC PD T + I+++L + R EA DI K +GIS
Sbjct: 238 CKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGIS 294
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 223/465 (47%), Gaps = 15/465 (3%)
Query: 40 QCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV 99
+ P+ +TYNILI G C +G + + L +ME G PNV TY LID +C R+ E
Sbjct: 5 RVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEA 64
Query: 100 FRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
F +L+ M + + PN + +++G+ R +A+E+L + ++ NTLL
Sbjct: 65 FGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNG 124
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
+A I +M G P T+ + + +LN D RG++P
Sbjct: 125 YCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPN 184
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
TY L++ + G E R LN + + +V +YN I C + M+ A + +
Sbjct: 185 ERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQ 244
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
EM ++ +AP++V+++T+ISG C+ E+ + ++ ++E G PD T++S+I LC
Sbjct: 245 EMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMR 304
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
R +A D EM++ G+PP+ TY LI + C GD+ ++L L +M PD T++
Sbjct: 305 RLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYS 364
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK-----------ALIKS----G 444
LI + + +A++ F ++ P + +Y LI+ ALIK G
Sbjct: 365 VLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKG 424
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
EA + F SM + P N+I+ + G +A ++ K
Sbjct: 425 LMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYK 469
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 203/466 (43%), Gaps = 50/466 (10%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P+ YN +I+ L + S+ A+ ++M PD TYN L++G C+ G
Sbjct: 71 MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGN 130
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+AL + +M G +P+V TYT LI+ C A+ + + M+ R + PNE T +
Sbjct: 131 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 190
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G S + +EA IL +M + G
Sbjct: 191 LIDG-----------------------------------FSRQGLLNEAYRILNEMTESG 215
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ P T++ + + E G++ +++G+ P +Y ++ + G
Sbjct: 216 FSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAF 275
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + + + +Y+ +I C++ + A ++ +EM D + P+ T+ TLI+ +
Sbjct: 276 QMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAY 335
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C + +++K L ++ GF PD T++ +I+ L + R +A L +++ P+
Sbjct: 336 CVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSD 395
Query: 361 ITYNI---------------LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+TY+ LI+ C G + + R+F+ M P +N +I
Sbjct: 396 VTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGH 455
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
CR + KA + M+ G P + LIKAL K G +E +
Sbjct: 456 CRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSE 501
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 150/316 (47%), Gaps = 4/316 (1%)
Query: 190 YTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
YT L+ G +L + G + G P TY L++A K GR E L
Sbjct: 11 YTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKS 70
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + N+ SYN++I+ C+ M A EI EM + P+ VT+NTL++G+CK+
Sbjct: 71 MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGN 130
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
H+ + ++ G P T+ ++I+ +C+A A++ +M G+ PN TY
Sbjct: 131 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 190
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI G + + R+ +M SP + T+NA I C + ++E+A M+ G
Sbjct: 191 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 250
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
L PD SYS +I + G D A Q M + G +PD+ T + +++ L + R EA
Sbjct: 251 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 310
Query: 486 DIVKTSKERGISFKSF 501
D+ + + G+ F
Sbjct: 311 DLSQEMLDMGLPPDEF 326
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 172/361 (47%), Gaps = 15/361 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SPS Y A+I+++ K+ +++ A F QM + +P+ TY LI G R G+++EA
Sbjct: 145 GVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEA 204
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++ +M G++P+V TY I G C +R+ E V++ M E+ + P+ + +++ G
Sbjct: 205 YRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISG 264
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + +AF++ +E+ + ++L+ L +EA + ++M D G P+
Sbjct: 265 FCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPD 324
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL- 243
T+ + DLN+ + D I +G P TY +L+ L K R E R L
Sbjct: 325 EFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLF 384
Query: 244 NHVFKDRLVSNVNSYNMVIDC--------------FCKVNMMDRATEICREMRDRDIAPN 289
++++ + S+V ++ +C FC +M A + M +R+ P
Sbjct: 385 KLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPG 444
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+N +I GHC+ + K L ++ GF P T ++I L + E+ + +
Sbjct: 445 EAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIG 504
Query: 350 E 350
+
Sbjct: 505 D 505
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 131/252 (51%)
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + R+ NV +YN++I FC V + + EM PN+VT+NTLI +CK
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + LL + G +P+ ++N +I+ LCR ++A + L EM G P+ +TYN
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L+ C G+ ++L + +M + +SP + T+ ALI S C+ + +A + F M G
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
LRP+ +Y+ LI + G +EA + M ++G +P T N + R EEA
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240
Query: 486 DIVKTSKERGIS 497
+V+ E+G++
Sbjct: 241 GVVQEMVEKGLA 252
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 240/484 (49%), Gaps = 7/484 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P +YNA+I K+ A+ +M + C P TY ++ G+C+ G +
Sbjct: 39 MGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKD 98
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A++L+ +M G +PN+YTY ++++G C +++ E ++LE M R P+ T S +
Sbjct: 99 AVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIK 158
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ +C +A +F+ R P+T +V T++ L + A+ +L +M +RG
Sbjct: 159 GLCKCDRVDEAR----KFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCT 214
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ T+ + G ++ G+LD+ +K G +P Y L+ AL++ G + +
Sbjct: 215 PDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDM 274
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + + +V SYN ID CK + +A + M +R PN +++ L+ CK
Sbjct: 275 LVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCK 334
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV-PPNTI 361
E+ L+ E D + ++D LC+ RF++A S++++ + P+
Sbjct: 335 KKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVF 394
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
YN+++ S C + ++L++ ++M +R ++ T+N L+ C +++ AE +M
Sbjct: 395 FYNVMLDSHCKRRQIDKALQIHKQM-LERNCCNVVTWNILVHGLCVDDRLSDAETMLLTM 453
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ G PD +Y L+ A+ K G+ A + F + GC PD T + ++ LV +
Sbjct: 454 VDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMA 513
Query: 482 EEAH 485
EEA+
Sbjct: 514 EEAY 517
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 237/492 (48%), Gaps = 15/492 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN+ I L K + +D A +M V PD +Y +I+G+C+ G +D A
Sbjct: 145 GYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV---TPDVVSYTTVINGLCKSGDLDSA 201
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++ QM G P+V TY+ LIDGFC V +L+ M + PN SL+
Sbjct: 202 SRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGA 261
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ R KA ++L+ MER T +V N + L +A A+ +M +RG P
Sbjct: 262 LHRLGHIGKAEDMLVE-MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTP 320
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+S++ V L +L++ +++ ++ Y +L++ L K GR E
Sbjct: 321 NASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALF 380
Query: 244 NHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ V +++ +V YN+++D CK +D+A +I ++M +R+ N+VT+N L+ G C
Sbjct: 381 SKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCV 439
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
D + +L+ +++ GF PD T+ +++D +C+ + AL+ E V+ G P+ +T
Sbjct: 440 DDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVT 499
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y+ LI L + LF K+ D+ +NA+I + + K F ++
Sbjct: 500 YSALITGLVHENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGDLGLKLFVELI 552
Query: 423 TLGLRPDNFSYSALIKA-LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ P+ ++ I L+K+ +A+ F + G PD + +N +++ + G
Sbjct: 553 ESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDL 612
Query: 482 EEAHDIVKTSKE 493
EEA I + K+
Sbjct: 613 EEARRIFYSMKQ 624
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 218/459 (47%), Gaps = 9/459 (1%)
Query: 40 QCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV 99
C+PD FT+ IL+ G+CR +++A +L+ +M+ +G P+ Y LI G+ AK +
Sbjct: 5 SCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQA 64
Query: 100 FRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
F+ L M + + P T ++V G+ + A +LL ++ N ++
Sbjct: 65 FKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEG 124
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR-GVKP 218
L EA +L +M RGY P+ T++ + L ++E F+ R V P
Sbjct: 125 LCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA----RKFLARMPVTP 180
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
+Y ++ L K+G R L+ + +V +Y+ +ID FCK ++RA +
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 240
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
M PN+V +N+L+ + + K ++LV + GF PD ++N+ ID LC+A
Sbjct: 241 DSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKA 300
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
R + A MVE G PN +Y++L+ LC ++ ++ L ++ + DI +
Sbjct: 301 ERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLY 360
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGL-RPDNFSYSALIKALIKSGRFDEAKQTFLSM- 456
L+ C+ + ++A F +L + PD F Y+ ++ + K + D+A Q M
Sbjct: 361 TVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQML 420
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
E+N CN T N+++ L R +A ++ T + G
Sbjct: 421 ERNCCN--VVTWNILVHGLCVDDRLSDAETMLLTMVDEG 457
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 132/287 (45%), Gaps = 3/287 (1%)
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
I + +P T+ +L+ L ++ + + + L + + V + YN +I + K
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+A + EM P +VT+ ++ G CK +LL + + G P+ +T+N
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+++ LC + ++A L EM G P+ +TYN I+ LC V + + +M
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP--- 177
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
++PD+ ++ +I C+ ++ A + M G PD +YS+LI K G + A
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
SM + GC P+ N +L L + G +A D++ + RG +
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFT 284
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/498 (26%), Positives = 229/498 (45%), Gaps = 36/498 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP YN +++A + + A +M D P R TYN L+ R+G + +A
Sbjct: 234 GLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQA 293
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE-RNVCPNEATVRSLVH 123
++V+ M G+ P+++TY +L G C A +V E FR+ + M+ + P+ T +L
Sbjct: 294 TKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLAD 353
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
F+C A LL E+ + N ++ L + A L KM D G P
Sbjct: 354 ACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAP 413
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + ++ + ++D ++RG+K T+ L
Sbjct: 414 DVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLK--LDTFTL------------------ 453
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N V+ CK + A + + R P+ V++ T+++ + K+
Sbjct: 454 ---------------NTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKE 498
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
L ++E P T+N++I L R R ++A+D L+E++E G+ P+ TY
Sbjct: 499 YNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTY 558
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI+I + C GD+ + + KM + PD+ T N L+ C K++KA K F S +
Sbjct: 559 NIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVE 618
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G + D +Y+ LI+ + K G D A F ME G PD++T N++L L + GR EE
Sbjct: 619 KGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEE 678
Query: 484 AHDIVKTSKERGISFKSF 501
A +++ E G +SF
Sbjct: 679 AQNMLHKLAESGTLSQSF 696
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
Query: 322 KPDKFTFNSMIDCLCRAHRF--EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
+P N+++ L R+ + +LD +V + PN T+N+L+ + C+ G +A +
Sbjct: 164 RPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADA 223
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
L MQ +SPD T+N L+ + CR + +A M G+ P +Y+ L+ A
Sbjct: 224 LSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSA 283
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ G +A + +M NG PD +T N++ L Q G+ +EA
Sbjct: 284 YARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEA 328
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%)
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
SL F+ + A R+ P+ YTFN L+ + C + A +M GL PD +Y+ L+
Sbjct: 188 SLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLN 247
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
A + G EA+ M+++G P T N ++ + G ++A +V+ G
Sbjct: 248 AHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANG 304
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/479 (28%), Positives = 227/479 (47%), Gaps = 4/479 (0%)
Query: 10 TRLYNAVIDALVKSNSIDLAY-LKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
T +++ ++ L + +D A + ++M C PD F+Y+IL+ G C +EAL L+
Sbjct: 128 TVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELL 187
Query: 69 KQMEGLG---YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
M G + PNV TYT +IDG C A+ V V + M ++ V PN T L+HG
Sbjct: 188 SMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGY 247
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ ++L + LL L N +EA I + +G P
Sbjct: 248 LSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNV 307
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+ + + T L+E LD + GV P + ++ A K E +
Sbjct: 308 TIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDK 367
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + RL N+ +Y +ID CK+ +D A +M D + P++ F++L+ G C +
Sbjct: 368 MRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDK 427
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
K EL +L+ G + D FN+++ LCR R +A + M+ GV P+ I+YN
Sbjct: 428 WEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNT 487
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L+ C G + + +L + + + PD T+N L+ +C+ +I+ A F ML G
Sbjct: 488 LVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKG 547
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
L PD +Y+ ++ L ++GRF EAK+ +LSM + + YT N+I+ L + +EA
Sbjct: 548 LTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEA 606
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 231/529 (43%), Gaps = 35/529 (6%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ Y VID L K+ +D A FQ M +P+ TY LIHG IG E ++
Sbjct: 199 TPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQ 258
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG-- 124
++++M G P+ Y Y +L+D C R E + + + + + PN L+HG
Sbjct: 259 MLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYA 318
Query: 125 ---------------VFRCLDP-HKAFELLIRFMEREPL------------TQKLVCNTL 156
V + P H F ++ ++ + Q+L N +
Sbjct: 319 TEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIV 378
Query: 157 LY-----RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
Y L +A +M D G P+ F V L T + +
Sbjct: 379 TYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEV 438
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+ +G++ + LM L + GR +E R ++ + + + +V SYN ++D C +
Sbjct: 439 LDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRI 498
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
D A ++ + + P+ VT+NTL+ G+CK + L +L G PD T+N++
Sbjct: 499 DEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTI 558
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
+ L + RF +A + M+ N TYNI+I LC V + ++F + + +
Sbjct: 559 LHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDL 618
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
DI+T N +I + + + E A F ++ GL PD +Y + + LIK G +E +
Sbjct: 619 QLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDE 678
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
F +ME+NG P+S N ++ L+ +G A + E+ S ++
Sbjct: 679 LFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEA 727
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 5/287 (1%)
Query: 216 VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL-VSNVNSYNMVIDCFCKVNMMDRA 274
V P TY +L+ + GR G + K V++ ++ ++ C +D A
Sbjct: 88 VAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEA 147
Query: 275 TEIC-REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG---FKPDKFTFNS 330
T+I R M + P++ +++ L+ G C + + ELL M+ + G P+ T+ +
Sbjct: 148 TDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTT 207
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+ID LC+A + A M++ GV PN TY LI +IG +++ Q+M
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHG 267
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ PD Y + L+ C+ + +A F S++ G++P+ Y L+ G E
Sbjct: 268 LQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMH 327
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M NG +PD + N++ ++ +EA I +++ +S
Sbjct: 328 SFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLS 374
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 337 RAHR----FEDALDCLSEMVEWGVPPNTITYNILI----RSLCAIGDVARSLRLFQKMQA 388
RAH DAL EM+ P + +N L+ R+ C+ + LF +M
Sbjct: 24 RAHSGSLGLNDALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSAS-ELVVSLFNRMIR 82
Query: 389 D---RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR-PDNFSYSALIKALIKSG 444
+ +++P +T+ LI FCRM +++ AF +L G R D +S L+K L +
Sbjct: 83 ECSIKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAK 142
Query: 445 RFDEAKQTFL-SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
R DEA L M + GC PD ++ +++L+ + R EEA +++ + G
Sbjct: 143 RVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDG 194
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 11/239 (4%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I +G+ P YN ++ K+ ID AY F++M + PD TYN ++HG+ + G
Sbjct: 508 IVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGR 567
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
EA L M N+YTY I+I+G C V E F++ + +++ + T
Sbjct: 568 FSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANI 627
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA-----AILRK 175
++ + + A +L LV + Y L ++ E + +
Sbjct: 628 MIGALLKGGRKEDAMDLFATIS-----AYGLVPDVETYCLIAENLIKEGSLEELDELFSA 682
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
M + G P S + V L+ D+N L ++ ST +L+ ++Y G
Sbjct: 683 MEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLI-SIYSRG 740
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 244/493 (49%), Gaps = 4/493 (0%)
Query: 2 SFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
S G S + +N+++ LV+ A F+ + C+PD +YNI+I G C G +
Sbjct: 69 SIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDL 128
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
AL L+++M+ G+AP+ +T+T +I NA ++ ++ ++ PN T +L
Sbjct: 129 HAALELLEEMKSAGFAPDAFTHTPIITAMANA---GDLDGAMDHLRSMGCDPNVVTYTAL 185
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ R +A +LL ER + N L+ L SM A +++KM + G+
Sbjct: 186 IAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGF 245
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P TF+ V ++++ +L + +G++P TY L++ L K+ + +E
Sbjct: 246 APNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKE 305
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + + + +Y+ +I CK + ++ A ++ R M P++V ++++I C
Sbjct: 306 VLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFC 365
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG-VPPNT 360
K ++ + ++ L + + PD T+N++ID LC+ + +A L +M E G V P+
Sbjct: 366 KSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDV 425
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TY+ +I LC + + +L +M +PD+ T+ +I C+ ++E+AE
Sbjct: 426 VTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQG 485
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G P+ +Y+ LI L K+ + DEA++ M GC P+ T N ++ L GR
Sbjct: 486 MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGR 545
Query: 481 FEEAHDIVKTSKE 493
+EA +V+ K+
Sbjct: 546 IKEAQQLVQRMKD 558
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 221/457 (48%), Gaps = 38/457 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P+ Y A+I A ++ ++ A ++M C P+ TYN+L+ +C++ +V
Sbjct: 173 MGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGA 232
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +VK+M G+APNV T+ L+DGFC V + ++L IM + + PN T +L+
Sbjct: 233 AQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALID 292
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +QK + EA +L +M RG P
Sbjct: 293 GLCK--------------------SQKFL---------------EAKEVLEEMKTRGVTP 317
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ T+ + L + E +L G P Y ++ A K+G+ +E + L
Sbjct: 318 DAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTL 377
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR-DIAPNLVTFNTLISGHCK 302
+ K R +V +YN VID CK+ + A I +M++ D+ P++VT++T+I+G CK
Sbjct: 378 QEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCK 437
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + ++LL + + G PD T+ ++ID LC+ R E+A L M G PN +T
Sbjct: 438 SDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVT 497
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y LI LC V + R+ ++M+ P++ T+N ++ C +I++A++ M
Sbjct: 498 YTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMK 557
Query: 423 T--LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
PD +Y ++ AL+ S EA+Q M+
Sbjct: 558 DGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMK 594
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 177/342 (51%), Gaps = 3/342 (0%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
N+LL L EA + R P+ +++ ++ DL+ +L+
Sbjct: 81 NSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKS 140
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G P T+ ++ A+ AG D++G ++H+ NV +Y +I F + ++
Sbjct: 141 AGFAPDAFTHTPIITAMANAG-DLDG--AMDHLRSMGCDPNVVTYTALIAAFARAKKLEE 197
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A ++ EMR+R PNLVT+N L+ CK + V ++++ ++E GF P+ TFNS++D
Sbjct: 198 AMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVD 257
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
C+ +DA L MV G+ PN +TY+ LI LC + + ++M+ ++P
Sbjct: 258 GFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTP 317
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
D +T++ALI C+ +KIE+AE+ M G PD YS++I A KSG+ EA++T
Sbjct: 318 DAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTL 377
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
M + +PD T N +++ L + G+ EA I++ +E G
Sbjct: 378 QEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/500 (27%), Positives = 231/500 (46%), Gaps = 43/500 (8%)
Query: 2 SFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
S LGI P T + N VI++L + + M +P T+ ILI+G+C G V
Sbjct: 103 SSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDV 162
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
A+ LV +E GY +V TY +LI+G C + +E L M+ERN PN ++
Sbjct: 163 GRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTV 222
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ G L + + SEA + +M +G
Sbjct: 223 MDG-----------------------------------LCKDGLVSEALGLCLEMSGKGI 247
Query: 182 LPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
P T+ TCL+ GL E +LD +K GV P + +L++ L K G+ +
Sbjct: 248 KPNLVTY----TCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIM 303
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ + + V +V +YN +ID +C N MD AT + M R P++V + +LI
Sbjct: 304 QAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLI 363
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G CK ++K LL +++ GF PD T+ ++I C+ R A + M ++G
Sbjct: 364 HGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQV 423
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
PN T I++ LC ++ +L LF M+ + +I ++ ++ C K+ A +
Sbjct: 424 PNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALEL 483
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F + GL+ + ++Y+ +I K G D+A+ +ME+NGC PDS T N+ ++ LV
Sbjct: 484 FSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVA 543
Query: 478 QGRFEEAHDIVKTSKERGIS 497
+ + + +++G S
Sbjct: 544 EREIARSIKYLTMMRDKGFS 563
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/520 (22%), Positives = 217/520 (41%), Gaps = 84/520 (16%)
Query: 17 IDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGY 76
I+ ++S+S +L F + +QCK + +DEAL M +
Sbjct: 27 INHEIQSHSNKTQFLNFMR---NQCKSGKLKS------------IDEALNFFHTMAKMNP 71
Query: 77 APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFE 136
P+V +T+L+ GF I+K ++ T SLV + H +
Sbjct: 72 LPSVIDFTLLL-GF--------------IVKMKHY----TTAISLVK------EMHSSLG 106
Query: 137 LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLV 196
+ +P T + N ++ L + + + ++L M G P TF + L
Sbjct: 107 I-------KPDT--FILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLC 157
Query: 197 TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVN 256
D+ ++D K G + TY +L+ L K G+ E +L + + NV
Sbjct: 158 VKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVV 217
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC--------------- 301
Y+ V+D CK ++ A +C EM + I PNLVT+ LI G C
Sbjct: 218 VYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEM 277
Query: 302 --------------------KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
K+ ++ + + ++ ++ G PD FT+NS+ID C ++
Sbjct: 278 MKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQM 337
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
++A MV G P+ + Y LI C I ++ +++ L +M +PD+ T+ L
Sbjct: 338 DEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTL 397
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I FC++ + A++ F +M G P+ + + ++ L KS EA F +ME++
Sbjct: 398 IGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNL 457
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ + ++IL+ + G+ A ++ +G+ +
Sbjct: 458 DLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVY 497
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 136/317 (42%), Gaps = 14/317 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P + N ++D L K I A M + PD FTYN LI C +DE
Sbjct: 280 MGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDE 339
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A R+ + M G P++ YT LI G+C K + + +L+ M + P+ T +L+
Sbjct: 340 ATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIG 399
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + P A EL + + + C +L L + + SEA ++ M
Sbjct: 400 GFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAM------- 452
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIK-------RGVKPRFSTYLLLMEALYKAGRD 236
E S D + LD + G L+T ++ +G++ Y +++ K G
Sbjct: 453 EKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLL 512
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
+ + L+++ ++ + + +YN+ + + R+ + MRD+ + + T +
Sbjct: 513 DKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMI 572
Query: 297 ISGHCKDAEVHKTRELL 313
I+ + ++ RE L
Sbjct: 573 INYLSTNQGDNELREFL 589
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 228/478 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GIS +T YN +I +L + + A+ QM PD +Y+ +I G C +G + +A
Sbjct: 253 GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKA 312
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L+ M+ G PN YTY +I C + E +VL M + + P+ +L+HG
Sbjct: 313 LKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHG 372
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ A + + ++ + TL+ E + +M RG P+
Sbjct: 373 FFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPD 432
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + ++ + + ++ G+ P TY L++ L K G + L+
Sbjct: 433 EVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLD 492
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K L NV YN +++ CK +++A ++ +EM I P+ +T+ T+I +C+
Sbjct: 493 EMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLG 552
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ K +LL +L+ G +P TFN +++ C ED L M+E G+ P+ ITYN
Sbjct: 553 DIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYN 612
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L++ C + + +++++M+ ++PD T+N LI+ C+ +++A + M+
Sbjct: 613 TLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK 672
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G P SY+ALIK K + EA++ F M +G D N ++ ++G E
Sbjct: 673 GYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVE 730
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 221/450 (49%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
+YNI+I+ +CR+G V EA RL+ QM+ P+V +Y+ +IDG+C+ + + ++++ M
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDM 319
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
+ + + PN T S++ + + +A ++L M ++ + +V TL++
Sbjct: 320 QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHV 379
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
A +M + P+ T+ + G + E + I RG+KP TY L
Sbjct: 380 RTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTL 439
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ KAG V N + + + N+ +Y +ID CK +D A E+ EMR + +
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL 499
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
N+ +N++++G CK + + +L+ + G PD T+ ++ID CR + A
Sbjct: 500 QLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHK 559
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L EM++ G+ P +T+N+L+ C +G + RL M I PD T+N L++ C
Sbjct: 560 LLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHC 619
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
N + K + M G+ PD+ +Y+ LIK K+ EA + M + G P
Sbjct: 620 IRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVT 679
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ N +++ ++ + EA ++ + + G+
Sbjct: 680 SYNALIKRFYKKKKILEARELFEEMRGHGL 709
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/458 (22%), Positives = 198/458 (43%), Gaps = 39/458 (8%)
Query: 76 YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAF 135
+ PN + I ++E ++L+ + + TV S + R + +
Sbjct: 186 WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLV---VTVDSCNAFLSRIANNSEGI 242
Query: 136 ELLIR-FMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
E+ I+ F E N ++Y L EA +L +M R P+ ++ +
Sbjct: 243 EMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDG 302
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
+L + ++D +G+KP TY ++ L K G+ E ++ L + +++ +
Sbjct: 303 YCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPD 362
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
Y +I F K+ + A + EM + I+P+ +T+ TLI G + +V + + L
Sbjct: 363 NVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFH 422
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA-- 372
++ G KPD+ T+ ++ID C+A +A +EMV+ G+ PN +TY LI LC
Sbjct: 423 EMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHG 482
Query: 373 ---------------------------------IGDVARSLRLFQKMQADRISPDIYTFN 399
G++ ++++L ++M+ I PD T+
Sbjct: 483 ELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYT 542
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
+I ++CR+ I+KA K ML GL+P +++ L+ G ++ + M +
Sbjct: 543 TVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEK 602
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G PD+ T N +++ + I K + +G++
Sbjct: 603 GIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVA 640
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 173/377 (45%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P +Y +I K + A F +M + PD TY LI G + G V E
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ 418
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L +M G P+ TYT LID +C A + F + M + + PN T +L+ G+
Sbjct: 419 NLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGL 478
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ + A ELL ++ + N+++ + +A ++++M G P++
Sbjct: 479 CKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDA 538
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + D+++ +L + RG++P T+ +LM G +GDR L
Sbjct: 539 ITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGW 598
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + +V + +YN ++ C N M+ T+I + MR++ +AP+ T+N LI GHCK
Sbjct: 599 MLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARN 658
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + L ++E G+ P ++N++I + + +A + EM G+ + YN
Sbjct: 659 LKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNF 718
Query: 366 LIRSLCAIGDVARSLRL 382
+ GDV +L L
Sbjct: 719 FVDMCYEEGDVEITLNL 735
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 136/282 (48%), Gaps = 7/282 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G++P+ Y A+ID L K +D A +M + + YN +++GIC+ G +++
Sbjct: 462 MGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQ 521
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A++L+K+ME G P+ TYT +ID +C + + ++L+ M +R + P T L++
Sbjct: 522 AIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMN 581
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G LL +E+ + + NTL+ + + + I ++M ++G P
Sbjct: 582 GFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAP 641
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+S+T++ + +L E + I++G P ++Y L++ YK + +E
Sbjct: 642 DSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELF 701
Query: 244 NHVFKDRLVSNVNSYNMVID-CF------CKVNMMDRATEIC 278
+ LV++ YN +D C+ +N+ D A E C
Sbjct: 702 EEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKC 743
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/479 (27%), Positives = 239/479 (49%), Gaps = 5/479 (1%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM--EGLGYAPNV 80
S+++D+ + Q+ C P+ F+YNIL+ G+C EAL L++ M +G P+V
Sbjct: 143 SDAMDIVLRRMTQLG---CIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDV 199
Query: 81 YTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIR 140
+YT +I+GF + + + M +R + PN T S++ + + KA E+L
Sbjct: 200 VSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTS 259
Query: 141 FMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLD 200
++ + N++++ ++ EA L+KM G P+ T++ + L
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
E + D+ KRG+KP +TY L++ G VE L+ + ++ + N +++
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
+I + K +D+A + +MR + + P+ VT+ T+I CK V +++
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
P +NS+I LC +++ A + + EM++ G+ +TI +N +I S C G V S
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
+LF M + P+I T++ LI +C K+++A K SM+++G++PD +Y+ LI
Sbjct: 500 KLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
K R ++A F ME +G +PD T N+IL+ L Q R A ++ E G +
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLE 618
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 158/569 (27%), Positives = 249/569 (43%), Gaps = 72/569 (12%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD--QCKPDRFTYNILIHGICRIGVV 61
LG P+ YN ++ L N A Q M D C PD +Y +I+G + G +
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
D+A +M G PNV TY +I C A+ + + VL M + V PN T S+
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
VHG P +A L + + N+L+ L N +EA + M RG
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR---------------------- 219
PE +T+ + T L E G+LD ++ G+ P
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 220 -FS------------TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
FS TY ++ L K+GR + RY + +RL YN +I C
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 267 KVNMMDRATEICREMRDRDI-----------------------------------APNLV 291
+ D+A E+ EM DR I PN++
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNII 515
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
T++TLI G+C ++ + +LL ++ G KPD T+N++I+ C+ R EDAL EM
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
GV P+ ITYNI+++ L A + L+ + ++ T+N ++ C+ N
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLT 635
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
++A + F ++ L+ + +++ +I AL+K GR DEAK F ++ NG PD T +L+
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Query: 472 LETLVQQGRFEEAHDIVKTSKERGISFKS 500
E L++QG EE D+ + +E G + S
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANS 724
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/534 (25%), Positives = 237/534 (44%), Gaps = 41/534 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ YN++I AL K+ ++D A M + P+ TYN ++HG C G EA
Sbjct: 229 GILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +K+M G P+V TY L+D C R E ++ + M +R + P T +L+ G
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348
Query: 125 VFR---CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++ H +L++R V + L+ + +A + KM +G
Sbjct: 349 YATKGALVEMHGLLDLMVR---NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY---------- 231
P++ T+ + L + + + I + P Y L+ +L
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465
Query: 232 -------------------------KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
K GR +E ++ + + + + N+ +Y+ +ID +C
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYC 525
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
MD AT++ M + P+ VT+NTLI+G+CK + + L + G PD
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+N ++ L + R A + + E G TYNI++ LC +LR+FQ +
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ + TFN +I + ++ + ++A+ F ++ GL PD +YS + + LI+ G
Sbjct: 646 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLL 705
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+E FLSME+NGC +S N I+ L+Q+G A + E+ S ++
Sbjct: 706 EELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEA 759
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 234/485 (48%), Gaps = 9/485 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN+++D L K+ A F M+ KP+ TY L+ G G + E
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G PN Y ++ILI + +V + V M+++ + P+ T +++ G
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI-G 417
Query: 125 VF----RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ R D + FE +I + +V N+L++ L +A ++ +M DRG
Sbjct: 418 ILCKSGRVEDAMRYFEQMI---DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
++ F+ + + E+ + D ++ GVKP TY L++ AG+ E
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEAT 534
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L + + + +YN +I+ +CK++ M+ A + REM ++P+++T+N ++ G
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ +EL V + E G + + T+N ++ LC+ + ++AL + + T
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
T+NI+I +L +G + LF + A+ + PD+ T++ + ++ +E+ + F S
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G ++ +++++ L++ G A +++ + ++ T++L L+ L+ G+
Sbjct: 715 MEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD-LLSGGK 773
Query: 481 FEEAH 485
++E H
Sbjct: 774 YQEYH 778
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 174/348 (50%), Gaps = 12/348 (3%)
Query: 160 LSNNSMASEAAAILR-----KMGDRGYLPESSTFDYTV-TCLVTG-LDLNETCGILDTFI 212
L++ + S AAA+ R + G P T+ + +C G LDL L I
Sbjct: 61 LADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAA--LGNVI 118
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
K+G + + L++ L R + D L + + + NV SYN+++ C N
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178
Query: 272 DRATEICREMRD--RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
A E+ + M D D P++V++ T+I+G K+ ++ K +L+ G P+ T+N
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYN 238
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
S+I LC+A + A++ L+ MV+ GV PN TYN ++ C+ G ++ +KM +D
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD 298
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ PD+ T+N+L+ C+ + +A K F SM GL+P+ +Y L++ G E
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M +NG +P+ Y ++++ +QG+ ++A + +++G++
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 222/497 (44%), Gaps = 35/497 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN ++D L K ++ A M P+R T+NIL+ G CR+G + EA
Sbjct: 227 GCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEA 286
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ M P+ +TY ++I GFC R+AE R+ E M+ + P+ T +L++G
Sbjct: 287 ANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLING 346
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F + F+L+ +M RG P
Sbjct: 347 CFEHGSSEEGFKLI-----------------------------------EEMEGRGMKPN 371
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S T++ V V ++E + + G P TY L+ K G+ E R ++
Sbjct: 372 SVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMD 431
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L + + N ++ C+ +D A ++ R R + V++ TLI G+ K
Sbjct: 432 EMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHE 491
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L + E P T+NSMI LC+ + A+D L E++E G+ P+ ITYN
Sbjct: 492 KASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYN 551
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I C G V ++ + KM PD+ T N L+ C+ +EKA K F + ++
Sbjct: 552 TIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISK 611
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G D SY+ +I +L K RF EA ME+ PD YT N IL L GR ++A
Sbjct: 612 GKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDA 671
Query: 485 HDIVKTSKERGISFKSF 501
+ + E+G S F
Sbjct: 672 EEFISKIAEKGKSENQF 688
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 166/368 (45%), Gaps = 32/368 (8%)
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
C PH+A ++ R L CNTLL A++R P S +
Sbjct: 137 CGRPHQAAQIFNRMKRLGMQPTLLTCNTLL------------NALVR-------FPSSHS 177
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + FIK GVK +++ +L+ R E R L +
Sbjct: 178 IRLSK-------------AVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMR 224
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ +YN ++D CK ++ A ++ +M+++ + PN TFN L+ G C+ +
Sbjct: 225 DYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLK 284
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ ++ ++ + PD +T+N MI C+ R +A+ EM + P+ +TYN LI
Sbjct: 285 EAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLI 344
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
G +L ++M+ + P+ T+N +++ F + K+++ +K M G
Sbjct: 345 NGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCL 404
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD +Y+ LI K G+ DEA + M + G D T N +L L ++ + +EAHD+
Sbjct: 405 PDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDL 464
Query: 488 VKTSKERG 495
+ +++ RG
Sbjct: 465 LCSARRRG 472
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 182/394 (46%), Gaps = 23/394 (5%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L +SP YN +I+ + S + + ++M KP+ TYN+++ + G +DE
Sbjct: 331 LKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDE 390
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ V++ME G P++ TY LI C ++ E FR+++ M + + ++ T+ +++
Sbjct: 391 VDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLR 450
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ R +A +LL R ++ TL+ + AS+A + +M ++ +P
Sbjct: 451 ALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIP 510
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + L N+ LD ++ G+ P TY ++ + G+ + ++
Sbjct: 511 SIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFH 570
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + + +V + N ++ CK M+++A ++ + + V++NT+I CK+
Sbjct: 571 NKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKE 630
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG-------- 355
+ +LL + E PD +T+N+++ L A R +DA + +S++ E G
Sbjct: 631 KRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFLE 690
Query: 356 -----------VP----PNTITYNILIRSLCAIG 374
+P PN I Y+ I LC+ G
Sbjct: 691 LGKRQDARTSEIPQEPHPNAIAYSNKINELCSQG 724
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 118/493 (23%), Positives = 245/493 (49%)
Query: 2 SFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
S +G+ +T YN ++ L + + A+ QM PD +Y++++ G C++ +
Sbjct: 244 SEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQL 303
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
+ L+L+++++ G PN YTY +I C RV E +VL +MK + + P+ +L
Sbjct: 304 GKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTL 363
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ G + + ++L ++ + + ++++ L EA + +M +G
Sbjct: 364 ISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGL 423
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P+ T+ + ++ E + + +++G+ P TY L++ L K G +
Sbjct: 424 KPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANE 483
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L+ + + L NV +YN +I+ CKV +++A ++ EM P+ +T+ T++ +C
Sbjct: 484 LLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYC 543
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K E+ K ELL ++L+ G +P TFN +++ C + ED + M++ G+ PN
Sbjct: 544 KMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNAT 603
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
T+N L++ C ++ ++ +++ M A + PD T+N LI+ C+ +++A M
Sbjct: 604 TFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEM 663
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ G SY++LIK K +F+EA++ F M +G + ++ ++ ++G +
Sbjct: 664 VEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNW 723
Query: 482 EEAHDIVKTSKER 494
E ++ + E+
Sbjct: 724 ENTLELCDEAIEK 736
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 237/476 (49%), Gaps = 3/476 (0%)
Query: 23 SNSID---LAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPN 79
SNS D A+ F++ S + +YNI++H +C++G V EA L+ QME G P+
Sbjct: 227 SNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPD 286
Query: 80 VYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLI 139
V +Y++++DG+C +++ +V +++E ++ + + PN+ T S++ + + +A ++L
Sbjct: 287 VVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLR 346
Query: 140 RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL 199
+ +V TL+ + S + +M + +P+ T+ + L
Sbjct: 347 VMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAG 406
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
+ E + + +G+KP TY L++ KAG E N + + L NV +Y
Sbjct: 407 KVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYT 466
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
++D CK +D A E+ EM ++ + PN+ T+N LI+G CK + + +L+ +
Sbjct: 467 ALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLA 526
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
GF PD T+ +++D C+ A + L M++ G+ P +T+N+L+ C G +
Sbjct: 527 GFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDG 586
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
RL + M I P+ TFN+L++ +C N + + + M G+ PD +Y+ LIK
Sbjct: 587 ERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKG 646
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
K+ EA M + G + + + N +++ ++ +FEEA + + + G
Sbjct: 647 HCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHG 702
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 177/363 (48%)
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
AF + + E + N +L+ L EA ++L +M RG +P+ ++ V
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD 295
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
L + +++ ++G+KP TY ++ L K GR VE ++ L + R+
Sbjct: 296 GYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFP 355
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+ Y +I F K + ++ EM+ + I P+ VT+ ++I G C+ +V + R+L
Sbjct: 356 DNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLF 415
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+L G KPD+ T+ ++ID C+A ++A ++MVE G+ PN +TY L+ LC
Sbjct: 416 SEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKC 475
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G+V + L +M + P++ T+NALI C++ IE+A K M G PD +Y
Sbjct: 476 GEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITY 535
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ ++ A K G +A + M G P T N+++ G E+ ++K +
Sbjct: 536 TTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLD 595
Query: 494 RGI 496
+GI
Sbjct: 596 KGI 598
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 3/189 (1%)
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
T L+ + G P F+ L A +A +++ +GV + + N+ +
Sbjct: 167 TERLIYTYKDWGAHP--LVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLA 224
Query: 369 SLCAIGDVARS-LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
L D R+ R+F++ + + ++N ++ C++ K+++A M G
Sbjct: 225 RLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNV 284
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD SYS ++ + + + + +++ G P+ YT N I+ L + GR EA +
Sbjct: 285 PDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQV 344
Query: 488 VKTSKERGI 496
++ K + I
Sbjct: 345 LRVMKNQRI 353
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 225/464 (48%), Gaps = 12/464 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y ++I +++++DLA+ F +M D C P+ TY+ LI+G+C G ++EA+ +
Sbjct: 235 PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDM 294
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+++M G P VYTYTI + C+A +E +L MK+R PN T +L+ G+ R
Sbjct: 295 LEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSR 354
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE-----AAAILRKMGDRGYL 182
FE+ I + L LV T+ Y N + E A I + M G L
Sbjct: 355 ----DGKFEIAIGLYHKM-LADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSL 409
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P + T++ + C D+ + I D +K G P TY L+ K G R
Sbjct: 410 PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRL 469
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + + L + +Y +I F + ++ AT + M + I+PN VT+ +I G+
Sbjct: 470 LEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFN 529
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
A+V L ++E G P T+N MI + + +A + +MV+ G+ PN IT
Sbjct: 530 LAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVIT 589
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK-AFFSM 421
Y I LC G + ++F +M+ P++YT+++LI C+ + E AE +
Sbjct: 590 YTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLAR 649
Query: 422 LT-LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
LT G P+ +Y+ L+K L GR EA Q +SM++ G P
Sbjct: 650 LTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPS 693
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 134/476 (28%), Positives = 223/476 (46%), Gaps = 8/476 (1%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+ ++ L K + +DLA + +M +P T+N +I+ +C+ G V EA ++ +
Sbjct: 170 FTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIF 229
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
PN +TYT LI G C + F + + M + PN T +L++G+
Sbjct: 230 RYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLE 289
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A ++L +++ L L + +SEA +L KM RG +P TF
Sbjct: 290 EAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTF---- 345
Query: 193 TCLVTGLDLNE----TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
T L++GL + G+ + G+ P TY L+ L GR +
Sbjct: 346 TALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLS 405
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+ + +YN +I CFC + + +A I +M +PN++T+NTLI G+CK ++
Sbjct: 406 HGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNN 465
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
LL ++ G KPD +T+ +I R + E A M+E G+ PN +TY +I
Sbjct: 466 AMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIID 525
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
+ V +L LF KM P T+N +I F + N I +AE M+ GL P
Sbjct: 526 GYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLP 585
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ +Y++ I L ++GR A + F ME+ P+ YT + ++ L Q+GR E+A
Sbjct: 586 NVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 213/482 (44%), Gaps = 10/482 (2%)
Query: 5 GISPSTRLYN----AVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
GI P+ Y ++ DA S +++L +M C P+ T+ LI G+ R G
Sbjct: 302 GIEPTVYTYTIPLVSLCDAGCSSEAVEL----LGKMKKRGCVPNIQTFTALISGLSRDGK 357
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A+ L +M G P TY LI+ C R F + + M P+ T
Sbjct: 358 FEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNE 417
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ D KA + + ++ + NTL+Y + A +L M G
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P++ T+ ++ G L + ++ G+ P TY +++ + + +
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + + +YN++I F K N + A C +M + + PN++T+ + I G
Sbjct: 538 ALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA--LDCLSEMVEWGVPP 358
C++ ++ + + + P+ +T++S+I LC+ R EDA + L+ + +G P
Sbjct: 598 CRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEP 657
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N TY L++ LC G + +L MQ + P + AL+ C+ K+E A F
Sbjct: 658 NVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIF 717
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+SM TLG + Y ALI AL K +EA+ F +M + N D ++L+ L+++
Sbjct: 718 YSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKE 777
Query: 479 GR 480
G
Sbjct: 778 GE 779
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 197/460 (42%), Gaps = 40/460 (8%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
++ L+ + + +VD A + +M G P++ T+ +I+ C RV E ++ +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
+ PN T SL+ G R N
Sbjct: 229 FRYDAYPNAFTYTSLILGHCR-----------------------------------NHNL 253
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
A A+ +M G P S T+ + L + L E +L+ +++G++P TY +
Sbjct: 254 DLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIP 313
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ +L AG E L + K V N+ ++ +I + + A + +M +
Sbjct: 314 LVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGL 373
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P VT+N LI+ C + + +L G P T+N +I C C + A+
Sbjct: 374 VPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMV 433
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
+M++ G PN ITYN LI C G++ ++RL + M+ + + PD +T+ LI F
Sbjct: 434 IFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFS 493
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R K+E A F+ M+ G+ P++ +Y+A+I + D+A F M ++G P S
Sbjct: 494 RGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQ 553
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERG-----ISFKSF 501
T N+++ + EA + ++G I++ SF
Sbjct: 554 TYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSF 593
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 130/498 (26%), Positives = 207/498 (41%), Gaps = 48/498 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+T YNA+I+ L + A+ F+ M P TYN +I C +G + +A
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKA 431
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + +M G +PNV TY LI G+C + R+LEIMK + P+ T L+ G
Sbjct: 432 MVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISG 491
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R A L ME + ++ N + +A A+ KM + G LP
Sbjct: 492 FSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPS 551
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S T++ +++ K E + +
Sbjct: 552 SQTYN-----------------------------------VMISGFSKTNSISEAENFCG 576
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD- 303
+ K L+ NV +Y ID C+ A +I EM R+ PNL T+++LI G C++
Sbjct: 577 KMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEG 636
Query: 304 -AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
AE + LL L G +P+ T+ +++ LC R +A + M + G+ P+
Sbjct: 637 RAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEI 696
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y L+ C V +L +F M + + ALI + C+ N IE+A+ F +ML
Sbjct: 697 YRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTML 756
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
D ++ L+ L+K G D + ME C L +T V R
Sbjct: 757 EKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNC-------TLNFQTYVMLAREL 809
Query: 483 EAHD----IVKTSKERGI 496
A D I + S++ GI
Sbjct: 810 SALDCAIKIPQISQQLGI 827
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 237/491 (48%), Gaps = 1/491 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS YN ++ L K + A F++M D P+ TYN+LI +C+ G V+ A
Sbjct: 368 GCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAA-PNLSTYNVLIDMLCKAGEVEAA 426
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ M+ G PNV T I+ID C AK++ E + E M + P+E T SL+ G
Sbjct: 427 FKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDG 486
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A+ L + ++ + + +V +L+ + I ++M RG P+
Sbjct: 487 LGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPD 546
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + C+ + + + + RG P +Y +L+ L KAG E
Sbjct: 547 LRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFY 606
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + V + ++YN ID FCK +++A ++ EM+ + P +VT+ ++I G K
Sbjct: 607 AMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKID 666
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L G + + ++S+ID + R ++A + E+++ G+ PN T+N
Sbjct: 667 RLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 726
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ +L ++ +L FQ M+ + +P+ T++ LI CR+ K KA + M
Sbjct: 727 CLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQ 786
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL+P+ +Y+ +I L K+G EA F + NG PDS + N I+E L R EA
Sbjct: 787 GLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEA 846
Query: 485 HDIVKTSKERG 495
+ I + ++ +G
Sbjct: 847 YKIFEETRMKG 857
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/492 (22%), Positives = 225/492 (45%), Gaps = 1/492 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++I L K N +D A F+QM ++ P + YN +I G G DEA
Sbjct: 298 GLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEA 357
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+++ + G P+V Y ++ R+ E R E MK ++ PN +T L+
Sbjct: 358 YSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDM 416
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + AF++ E + N ++ RL EA +I M + P+
Sbjct: 417 LCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPD 476
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + L +++ + + + P Y L+++ +K GR +G +
Sbjct: 477 EVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFK 536
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ N +DC K + + E++ R P++++++ LI G K
Sbjct: 537 EMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAG 596
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+T EL + E G D +N+ ID C++ + A L EM G P +TY
Sbjct: 597 FARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYG 656
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I L I + + LF++ +++ + ++ +++LI F ++ +I++A ++
Sbjct: 657 SVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQK 716
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL P+ ++++ L+ AL+K+ +EA F +M+ P+ T ++++ L + +F +A
Sbjct: 717 GLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKA 776
Query: 485 HDIVKTSKERGI 496
+ +++G+
Sbjct: 777 FVFWQEMQKQGL 788
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 224/500 (44%), Gaps = 11/500 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G PST+ +I + +KSN + + Q M + +P Y LI + +
Sbjct: 154 MSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQE 213
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
D L L QM+ LGY +V+ +T +I F R+ +L+ MK C + V
Sbjct: 214 SDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSN--CLHADIV-- 269
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-----LSNNSMASEAAAILRK 175
L + C ++ +F E + L+ + + Y L + EA I +
Sbjct: 270 LYNVCIDCFGKAGKVDMAWKFF-HEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQ 328
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
M +P + ++ + + +E +L+ RG P Y ++ L K GR
Sbjct: 329 MEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGR 388
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
E R + KD N+++YN++ID CK ++ A ++ M++ + PN++T N
Sbjct: 389 LGEALRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNI 447
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
+I CK ++ + + + PD+ TF S+ID L + R +DA +M++
Sbjct: 448 MIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSD 507
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
PN + Y LI+S G ++F++M SPD+ NA + + + K
Sbjct: 508 KIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGR 567
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
F + + G PD SYS LI L+K+G E + F +M++ GC D++ N ++
Sbjct: 568 ALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGF 627
Query: 476 VQQGRFEEAHDIVKTSKERG 495
+ G+ +A+ +++ K +G
Sbjct: 628 CKSGKVNKAYQLLEEMKTKG 647
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/528 (24%), Positives = 221/528 (41%), Gaps = 42/528 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y +I AL D+ F QM + + +I R G +D AL L
Sbjct: 196 PAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSL 255
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M+ ++ Y + ID F A +V ++ +K + P++ T S++ + +
Sbjct: 256 LDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCK 315
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+A E+ + + + NT++ + EA ++L + RG +P
Sbjct: 316 GNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIA 375
Query: 188 FDYTVTCLVTGLDLNETCGILDTF--IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
++ +TCL L E L TF +K+ P STY +L++ L KAG +VE +
Sbjct: 376 YNCILTCLGKKGRLGEA---LRTFEEMKKDAAPNLSTYNVLIDMLCKAG-EVEAAFKVRD 431
Query: 246 VFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
K+ L NV + N++ID CK +D A I M + +P+ VTF +LI G K
Sbjct: 432 AMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQG 491
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN----- 359
V L +L+ P+ + S+I + R ED EM+ G P+
Sbjct: 492 RVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLN 551
Query: 360 ------------------------------TITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++Y+ILI L G + LF M+
Sbjct: 552 AYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQ 611
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
D + +N I FC+ K+ KA + M T G +P +Y ++I L K R DEA
Sbjct: 612 GCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEA 671
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
F + NG + + +++ + GR +EA+ I++ ++G++
Sbjct: 672 YMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLT 719
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 189/433 (43%), Gaps = 53/433 (12%)
Query: 102 VLEIMKERNVCPN---------EATVRSLVHGVFR-CLDPHKAFELLIRFMEREPLTQKL 151
V +I++ N P+ E+ LV GV R D ++A R+ ER+ T +
Sbjct: 69 VCKILESGNWGPDVENALSLFVESPKTDLVIGVLRRAKDVNQAISYF-RWTERK--TDQA 125
Query: 152 VC----NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGI 207
+C ++LL ++ N IL +M G+ P + T + + L E +
Sbjct: 126 LCPEAYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDL 185
Query: 208 LDTFIKRGVKPRFSTYLLLMEAL-----------------------------------YK 232
+ K +P FS Y L+ AL +
Sbjct: 186 IQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAR 245
Query: 233 AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
GR L+ + + L +++ YN+ IDCF K +D A + E++ + P+ VT
Sbjct: 246 EGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVT 305
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+ ++I CK + + E+ + + P + +N+MI A +F++A L
Sbjct: 306 YTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQK 365
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
G P+ I YN ++ L G + +LR F++M+ D +P++ T+N LI C+ ++E
Sbjct: 366 ARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKD-AAPNLSTYNVLIDMLCKAGEVE 424
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
A K +M GL P+ + + +I L K+ + DEA F M C+PD T ++
Sbjct: 425 AAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLI 484
Query: 473 ETLVQQGRFEEAH 485
+ L +QGR ++A+
Sbjct: 485 DGLGKQGRVDDAY 497
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 172/399 (43%), Gaps = 8/399 (2%)
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHK---AFELL--IRFMEREPLTQKLVCNTLLY 158
+I+ E ++ + ++ + + C+ +K F+L+ +R + P TL+
Sbjct: 149 QILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYT--TLIG 206
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
LS+ + + +M + GY F + L+ +LD +
Sbjct: 207 ALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHA 266
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
Y + ++ KAG+ ++ + + L+ + +Y +I CK N +D A EI
Sbjct: 267 DIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIF 326
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
+M P +NT+I G+ + + LL G P +N ++ CL +
Sbjct: 327 EQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKK 386
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
R +AL EM + PN TYN+LI LC G+V + ++ M+ + P++ T
Sbjct: 387 GRLGEALRTFEEMKK-DAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTV 445
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
N +I C+ K+++A F M PD ++ +LI L K GR D+A + + M
Sbjct: 446 NIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLD 505
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ P++ ++++ + GR E+ H I K RG S
Sbjct: 506 SDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCS 544
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 112/239 (46%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+Y+ ++ K D +I EM P+ T LI K ++ + +L+ +
Sbjct: 130 AYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCM 189
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
+ F+P + ++I L + L +M E G + + +IR G +
Sbjct: 190 RKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRL 249
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+L L +M+++ + DI +N I F + K++ A K F + + GL PD+ +Y+++
Sbjct: 250 DAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSM 309
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
I L K R DEA + F MEQN P +Y N ++ G+F+EA+ +++ K RG
Sbjct: 310 IGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARG 368
>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 701
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 244/488 (50%), Gaps = 16/488 (3%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
RLY D+L+ + ++ A+ V +C ++ IG ++EA+ +V
Sbjct: 128 RLYLVTADSLLANGNLQKAH------EVMRC---------MLRNFSEIGRLNEAVGMVMD 172
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M+ G P+ T +++ + V + M R V P+ ++ + +V G FR
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A L ++R + C +L L N + + A RKM D G+ P F
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 292
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR-YLNHVFKD 249
+ L + + +L+ ++ G KP T+ L++ L K G + R +L V D
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 352
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
NV++Y +I +CK + ++RA + M+++ + PN+ T+ TLI+GHCK +
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
EL+ ++ + GF P+ +T+N+ ID LC+ R +A + L++ G+ + +TY ILI+
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
C D+ ++L F +M D+ N LI +FCR K++++E+ F +++LGL P
Sbjct: 473 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 532
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y+++I K G D A + F +M+++GC PDS+T ++ L ++ +EA + +
Sbjct: 533 KETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 592
Query: 490 TSKERGIS 497
+RG+S
Sbjct: 593 AMIDRGLS 600
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 186/459 (40%), Gaps = 69/459 (15%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHG---------- 54
G++PS+ N V++ V+ I+ A F +MSV PD +Y +++ G
Sbjct: 177 GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 236
Query: 55 -------------------------ICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDG 89
+C G+V+ A+ ++M LG+ PN+ +T LIDG
Sbjct: 237 DRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDG 296
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C + + F +LE M PN T +L+ G+ + KAF L ++ + +
Sbjct: 297 LCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDT--- 353
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
Y P T+ + LN +
Sbjct: 354 -------------------------------YKPNVHTYTSMIGGYCKEDKLNRAEMLFS 382
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
++G+ P +TY L+ KAG +N + + + N+ +YN ID CK +
Sbjct: 383 RMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKS 442
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
A E+ + + + VT+ LI CK ++++ + + GF+ D N
Sbjct: 443 RAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNN 502
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+I CR + +++ +V G+ P TY +I C GD+ +L+ F M+
Sbjct: 503 ILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRH 562
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
PD +T+ +LI C+ + +++A K + +M+ GL P
Sbjct: 563 GCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 181/402 (45%), Gaps = 13/402 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P+ + ++ID L K SI A+ ++M + KP+ +T+ LI G+C+ G ++
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 340
Query: 64 ALRL-VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A RL +K + Y PNV+TYT +I G+C ++ + MKE+ + PN T +L+
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G + +A+EL+ + + N + L S A EA +L K G
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 460
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+ T+ + D+N+ K G + +L+ A + + E +R
Sbjct: 461 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 520
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
V L+ +Y +I C+CK +D A + M+ P+ T+ +LISG CK
Sbjct: 521 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCK 580
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE--WGVPPNT 360
+ V + +L +++ G P + T ++ C+ + +A+ L + + W
Sbjct: 581 KSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLW-----I 635
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKM-----QADRISPDIYT 397
T L+R LC+ V + FQK+ ADR++ +T
Sbjct: 636 RTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFT 677
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 126/490 (25%), Positives = 239/490 (48%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P +N ++ +LVKS Q+M KP+ NILI+ C++G++ A
Sbjct: 82 TPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFS 141
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+ ++ +GY P+ T+T L G C ++ + F + + ++ + +L+HG+
Sbjct: 142 VFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLC 201
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + A +LL R ++ NT++ + + +EA + +M +G P+
Sbjct: 202 KVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVV 261
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ ++ L + + + I +KP T+ +L+ A K G+ EG + +
Sbjct: 262 TYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM 321
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K + N +YN ++D +C V +++A I M + P++ +++ +I+G CK +
Sbjct: 322 MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF 381
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ L + PD T++S+ID L ++ R AL + +M + GVPPN TYN +
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSI 441
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ +LC V +++ L K + PDI T++ LI+ C+ K+E A K F +L G
Sbjct: 442 LDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGY 501
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
D ++Y+ +I+ G F+EA ME NGC PD+ T +I+ +L ++ + A
Sbjct: 502 NLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEK 561
Query: 487 IVKTSKERGI 496
+++ RG+
Sbjct: 562 LLREMIARGL 571
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 178/391 (45%), Gaps = 35/391 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ +YN +ID++ K ++ A+ F +M PD TY+ LI G C +G + +A+
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAI 280
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L +M P+VYT+ IL++ FC ++ E V ++M ++ + PN T SL+ G
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDG- 339
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
CL ++A +I M G P+
Sbjct: 340 -YCLVKE---------------------------------VNKAKSIFNTMAQGGVNPDI 365
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
++ + +E + ++ + P TY L++ L K+GR + ++
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + N+ +YN ++D CK + +D+A + + +D+ P++ T++ LI G C+ +
Sbjct: 426 MHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGK 485
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ R++ LL G+ D + + MI C F +AL LS+M + G P+ TY I
Sbjct: 486 LEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
+I SL + + +L ++M A + + Y
Sbjct: 546 IILSLFKKDENDMAEKLLREMIARGLPLNFY 576
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 159/324 (49%), Gaps = 8/324 (2%)
Query: 181 YLPESST------FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
++P SS+ + T T + D+++ + + ++R P + ++ +L K+
Sbjct: 40 FIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKS- 98
Query: 235 RDVEGDRYLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
+ YL+ + R + N+ + N++I+CFC++ ++ A + ++ P+ +TF
Sbjct: 99 KHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITF 158
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
TL G C ++ + ++ GF D+ ++ ++I LC+ ALD L +
Sbjct: 159 TTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDG 218
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
V PN + YN +I S+C + V + LF +M + ISPD+ T++ALI FC + K++
Sbjct: 219 NLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKD 278
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A F M+ ++PD ++++ L+ A K G+ E K F M + G P+ T N +++
Sbjct: 279 AIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMD 338
Query: 474 TLVQQGRFEEAHDIVKTSKERGIS 497
+A I T + G++
Sbjct: 339 GYCLVKEVNKAKSIFNTMAQGGVN 362
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 148/320 (46%), Gaps = 8/320 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP Y+A+I + A F +M ++ KPD +T+NIL++ C+ G + E
Sbjct: 255 GISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M G PN TY L+DG+C K V + + M + V P+ + +++G
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMING 374
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A L + + + ++L+ LS + S A ++ +M DRG P
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPN 434
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L +++ +L F +G +P STY +L++ L ++G+ +E R
Sbjct: 435 ICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGK-LEDAR--- 490
Query: 245 HVFKDRLVSNVN----SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
VF+D LV N +Y ++I FC + + A + +M D P+ T+ +I
Sbjct: 491 KVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSL 550
Query: 301 CKDAEVHKTRELLVMLLECG 320
K E +LL ++ G
Sbjct: 551 FKKDENDMAEKLLREMIARG 570
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 225/464 (48%), Gaps = 12/464 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y ++I +++++DLA+ F +M D C P+ TY+ LI+G+C G ++EA+ +
Sbjct: 235 PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDM 294
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+++M G P VYTYTI + C+A +E +L MK+R PN T +L+ G+ R
Sbjct: 295 LEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSR 354
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE-----AAAILRKMGDRGYL 182
FE+ I + L LV T+ Y N + E A I + M G L
Sbjct: 355 ----DGKFEIAIGLYHKM-LADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSL 409
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P + T++ + C D+ + I D +K G P TY L+ K G R
Sbjct: 410 PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRL 469
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + + L + +Y +I F + ++ AT + M + I+PN VT+ +I G+
Sbjct: 470 LEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFN 529
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
A+V L ++E G P T+N MI + + +A + +MV+ G+ PN IT
Sbjct: 530 LAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVIT 589
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK-AFFSM 421
Y I LC G + ++F +M+ P++YT+++LI C+ + E AE +
Sbjct: 590 YTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLAR 649
Query: 422 LT-LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
LT G P+ +Y+ L+K L GR EA Q +SM++ G P
Sbjct: 650 LTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPS 693
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 134/476 (28%), Positives = 223/476 (46%), Gaps = 8/476 (1%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+ ++ L K + +DLA + +M +P T+N +I+ +C+ G V EA ++ +
Sbjct: 170 FTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIF 229
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
PN +TYT LI G C + F + + M + PN T +L++G+
Sbjct: 230 RYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLE 289
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A ++L +++ L L + +SEA +L KM RG +P TF
Sbjct: 290 EAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTF---- 345
Query: 193 TCLVTGLDLNE----TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
T L++GL + G+ + G+ P TY L+ L GR +
Sbjct: 346 TALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLS 405
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+ + +YN +I CFC + + +A I +M +PN++T+NTLI G+CK ++
Sbjct: 406 HGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNN 465
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
LL ++ G KPD +T+ +I R + E A M+E G+ PN +TY +I
Sbjct: 466 AMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIID 525
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
+ V +L LF KM P T+N +I F + N I +AE M+ GL P
Sbjct: 526 GYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLP 585
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ +Y++ I L ++GR A + F ME+ P+ YT + ++ L Q+GR E+A
Sbjct: 586 NVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 213/482 (44%), Gaps = 10/482 (2%)
Query: 5 GISPSTRLYN----AVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
GI P+ Y ++ DA S +++L +M C P+ T+ LI G+ R G
Sbjct: 302 GIEPTVYTYTIPLVSLCDAGCSSEAVEL----LGKMKKRGCVPNIQTFTALISGLSRDGK 357
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A+ L +M G P TY LI+ C R F + + M P+ T
Sbjct: 358 FEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNE 417
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ D KA + + ++ + NTL+Y + A +L M G
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P++ T+ ++ G L + ++ G+ P TY +++ + + +
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + + +YN++I F K N + A C +M + + PN++T+ + I G
Sbjct: 538 ALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA--LDCLSEMVEWGVPP 358
C++ ++ + + + P+ +T++S+I LC+ R EDA + L+ + +G P
Sbjct: 598 CRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEP 657
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N TY L++ LC G + +L MQ + P + AL+ C+ K+E A F
Sbjct: 658 NVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIF 717
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+SM TLG + Y ALI AL K +EA+ F +M + N D ++L+ L+++
Sbjct: 718 YSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKE 777
Query: 479 GR 480
G
Sbjct: 778 GE 779
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/498 (26%), Positives = 208/498 (41%), Gaps = 48/498 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+T YNA+I+ L + A+ F+ M P TYN +I C +G + +A
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKA 431
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + +M G +PNV TY LI G+C + R+LEIMK + P+ T L+ G
Sbjct: 432 MVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISG 491
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R A L ME + ++ N + +A A+ KM + G LP
Sbjct: 492 FSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPS 551
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S T++ +++ K E + +
Sbjct: 552 SQTYN-----------------------------------VMISGFSKTNSISEAENFCG 576
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD- 303
+ K L+ NV +Y ID C+ A +I EM R+ PNL T+++LI G C++
Sbjct: 577 KMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEG 636
Query: 304 -AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
AE + LL L G +P+ T+ +++ LC R +A + M + G+ P+
Sbjct: 637 RAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEI 696
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y L+ C V +L +F M + + ALI + C+ N IE+A+ F +ML
Sbjct: 697 YRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTML 756
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
D +++ L+ L+K G D + ME C L +T V R
Sbjct: 757 EKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNC-------TLNFQTYVMLAREL 809
Query: 483 EAHD----IVKTSKERGI 496
A D I + S++ GI
Sbjct: 810 SALDCAIKIPQISQQLGI 827
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 197/460 (42%), Gaps = 40/460 (8%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
++ L+ + + +VD A + +M G P++ T+ +I+ C RV E ++ +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
+ PN T SL+ G R N
Sbjct: 229 FRYDAYPNAFTYTSLILGHCR-----------------------------------NHNL 253
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
A A+ +M G P S T+ + L + L E +L+ +++G++P TY +
Sbjct: 254 DLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIP 313
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ +L AG E L + K V N+ ++ +I + + A + +M +
Sbjct: 314 LVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGL 373
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P VT+N LI+ C + + +L G P T+N +I C C + A+
Sbjct: 374 VPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMV 433
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
+M++ G PN ITYN LI C G++ ++RL + M+ + + PD +T+ LI F
Sbjct: 434 IFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFS 493
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R K+E A F+ M+ G+ P++ +Y+A+I + D+A F M ++G P S
Sbjct: 494 RGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQ 553
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERG-----ISFKSF 501
T N+++ + EA + ++G I++ SF
Sbjct: 554 TYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSF 593
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 123/481 (25%), Positives = 246/481 (51%), Gaps = 3/481 (0%)
Query: 20 LVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPN 79
LV++ ++ + + M PD LI G CRIG +A +++ +E G P+
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183
Query: 80 VYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLI 139
V TY +LI G+C + + +VL+ M NV P+ T +++ + +A E+L
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240
Query: 140 RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL 199
R +++E + L+ S +A +L +M ++G P+ T++ + +
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
L+E L+ G +P T+ +++ ++ GR ++ ++ L+ + + +V ++N
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
++I+ C+ ++ RA +I +M PN +++N L+ G CK+ ++ + E L +++
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G PD T+N+++ LC+ + + A++ L+++ G P ITYN +I L +G R+
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 480
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
++L +M+ + PDI T+++L+ R K+++A K F + LG+RP+ +Y++++
Sbjct: 481 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 540
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
L KS + D A M C P T +++E + +G +EA D++ RG+ K
Sbjct: 541 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKK 600
Query: 500 S 500
S
Sbjct: 601 S 601
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 181/388 (46%), Gaps = 10/388 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ ++P YN ++ L S + A + +C PD TY ILI C+ V +
Sbjct: 210 MNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQ 269
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT----VR 119
A++L+ +M G P+V TY +LI+G C R+ E + L M PN T +R
Sbjct: 270 AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILR 329
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGD 178
S+ R +D K L+ M R+ + +V N L+ L + A IL KM
Sbjct: 330 SMC-STGRWMDAEK----LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPM 384
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P S +++ + ++ LD + RG P TY L+ AL K G+
Sbjct: 385 HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDV 444
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
LN + + +YN VID KV +RA ++ EMR + + P+++T+++L+S
Sbjct: 445 AVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVS 504
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G ++ +V + + L G +P+ T+NS++ LC++ + + A+D L+ M+ P
Sbjct: 505 GLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKP 564
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKM 386
TY ILI + G +L L ++
Sbjct: 565 TEATYTILIEGIAYEGLAKEALDLLNEL 592
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 143/272 (52%), Gaps = 3/272 (1%)
Query: 230 LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
L + G +G ++L + + ++ +I FC++ +AT + + P+
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
++T+N LISG+CK E+ ++L + PD T+N+++ LC + + + A++ L
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
++ P+ ITY ILI + C V ++++L +M+ PD+ T+N LI C+
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
++++A K +M + G +P+ +++ +++++ +GR+ +A++ M + GC+P T N
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+++ L +QG A DI++ G + S
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSL 392
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 161/349 (46%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P Y +I+A K + + A +M KPD TYN+LI+GIC+ G +DEA++
Sbjct: 249 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 308
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ M G PNV T+ I++ C+ R + ++L M + P+ T L++ + R
Sbjct: 309 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 368
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+A ++L + L N LL+ A L M RG P+ T
Sbjct: 369 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 428
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ +T L ++ IL+ +G P TY +++ L K G+ + L+ +
Sbjct: 429 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 488
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ L ++ +Y+ ++ + +D A + ++ I PN +T+N+++ G CK +
Sbjct: 489 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 548
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ + L ++ KP + T+ +I+ + ++ALD L+E+ G+
Sbjct: 549 RAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 597
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 133/317 (41%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN +I+ + K +D A M C+P+ T+NI++ +C G +A
Sbjct: 281 GSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDA 340
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L+ M G +P+V T+ ILI+ C + +LE M PN + L+HG
Sbjct: 341 EKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHG 400
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A E L + R + NTLL L + A IL ++ +G P
Sbjct: 401 FCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV 460
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L +LD ++G+KP TY L+ L + G+ E ++ +
Sbjct: 461 LITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFH 520
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N +YN ++ CK DRA + M + P T+ LI G +
Sbjct: 521 DLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEG 580
Query: 305 EVHKTRELLVMLLECGF 321
+ +LL L G
Sbjct: 581 LAKEALDLLNELCSRGL 597
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN ++ AL K +D+A Q+S C P TYN +I G+ ++G + A
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 480
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+ +M G P++ TY+ L+ G +V E + ++ + PN T S++ G
Sbjct: 481 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 540
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A + L + + + L+ ++ +A EA +L ++ RG + +
Sbjct: 541 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKK 600
Query: 185 SSTFDYTV 192
SS V
Sbjct: 601 SSAEQVAV 608
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 111/259 (42%), Gaps = 2/259 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SPS +N +I+ L + + A ++M + C P+ +YN L+HG C+ +D A
Sbjct: 351 GCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRA 410
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + M G P++ TY L+ C +V +L + + P T +++ G
Sbjct: 411 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG 470
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +A +LL M R+ L ++ ++L+ LS EA + G P
Sbjct: 471 LSKVGKTERAIKLLDE-MRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRP 529
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + L + L I + KP +TY +L+E + G E L
Sbjct: 530 NAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLL 589
Query: 244 NHVFKDRLVSNVNSYNMVI 262
N + LV ++ + +
Sbjct: 590 NELCSRGLVKKSSAEQVAV 608
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 67/144 (46%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G SP YN VID L K + A +M KPD TY+ L+ G+ R G
Sbjct: 452 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 511
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VDEA++ +EGLG PN TY ++ G C +++ L M + P EAT
Sbjct: 512 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 571
Query: 121 LVHGVFRCLDPHKAFELLIRFMER 144
L+ G+ +A +LL R
Sbjct: 572 LIEGIAYEGLAKEALDLLNELCSR 595
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 151/516 (29%), Positives = 243/516 (47%), Gaps = 25/516 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +PS YNAV+ AL + S+ A M P+ +TYNIL+ +C G ++EA
Sbjct: 113 GYAPSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER-NVCPNEATVRSLVH 123
+ +V M G G APN TY L+ FC A + RV+ +M+E N PN T S+V+
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 124 GV---FRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDR 179
G+ R K F+ ++R E L +V NTLL E+ A+ +M R
Sbjct: 232 GLCKAGRMEGARKVFDEMVR----EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR 287
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G +P+ TF + +L + ++ +RG++ T+ L++ K G +
Sbjct: 288 GLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDA 347
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + K + +V YN +I+ +CK+ MD A E+ REM + + P++VT++T+ISG
Sbjct: 348 LLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISG 407
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+CK + +L +L+ G PD T++S+I LC R DA + M++ GV P+
Sbjct: 408 YCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPD 467
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
TY LI C G+V ++L L +M + PD+ T++ LI + + ++A + F
Sbjct: 468 EFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLF 527
Query: 420 SMLTLGLRPDNFSYSALI----KALIKS-----------GRFDEAKQTFLSMEQNGCNPD 464
+ PDN Y AL+ KA KS G EA + + SM D
Sbjct: 528 KLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLD 587
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
++++ + G +A K G S S
Sbjct: 588 GSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNS 623
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 126/309 (40%), Gaps = 50/309 (16%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI PS YNA+I+ K +DLA ++M + KPD TY+ +I G C++G +D A
Sbjct: 358 GIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSA 417
Query: 65 LRLVKQM--EG---------------------------------LGYAPNVYTYTILIDG 89
+L ++M +G LG P+ +TYT LIDG
Sbjct: 418 FQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDG 477
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C V + + + M + V P+ T L++G+ + +A LL + +P+
Sbjct: 478 HCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPD 537
Query: 150 K-------LVCN--------TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
L C+ LL + EA + + M DR + + S + +
Sbjct: 538 NIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHG 597
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
G ++ + ++ G P ++ + L+ L++ G VE D + + +++
Sbjct: 598 HCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLAD 657
Query: 255 VNSYNMVID 263
+ +ID
Sbjct: 658 AEASKALID 666
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 15/147 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P Y +ID K +++ A +M PD TY++LI+G+ + E
Sbjct: 462 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521
Query: 64 ALRLVKQMEGLGYAPNVYTY---------------TILIDGFCNAKRVAEVFRVLEIMKE 108
A RL+ ++ P+ Y L+ GFC + E +V + M +
Sbjct: 522 AHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLD 581
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAF 135
RN + + L+HG R + KA
Sbjct: 582 RNWKLDGSVYSILIHGHCRGGNVRKAL 608
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 34/132 (25%)
Query: 398 FNALIQSFCRMNK----------------------------------IEKAEKAFFSMLT 423
F+ALI+S+ + + + A + SML
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDASLPSARRFLSSMLR 145
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ P+ ++Y+ L++AL GR +EA M GC P++ T N ++ + G +
Sbjct: 146 HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDG 205
Query: 484 AHDIVKTSKERG 495
A +V +E G
Sbjct: 206 AERVVSLMREEG 217
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 123/481 (25%), Positives = 246/481 (51%), Gaps = 3/481 (0%)
Query: 20 LVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPN 79
LV++ ++ + + M PD LI G CRIG +A +++ +E G P+
Sbjct: 67 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126
Query: 80 VYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLI 139
V TY +LI G+C + + +VL+ M NV P+ T +++ + +A E+L
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183
Query: 140 RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL 199
R +++E + L+ S +A +L +M ++G P+ T++ + +
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
L+E L+ G +P T+ +++ ++ GR ++ ++ L+ + + +V ++N
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
++I+ C+ ++ RA +I +M PN +++N L+ G CK+ ++ + E L +++
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G PD T+N+++ LC+ + + A++ L+++ G P ITYN +I L +G R+
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 423
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
++L +M+ + PDI T+++L+ R K+++A K F + LG+RP+ +Y++++
Sbjct: 424 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 483
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
L KS + D A M C P T +++E + +G +EA D++ RG+ K
Sbjct: 484 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKK 543
Query: 500 S 500
S
Sbjct: 544 S 544
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 181/388 (46%), Gaps = 10/388 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ ++P YN ++ L S + A + +C PD TY ILI C+ V +
Sbjct: 153 MNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQ 212
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT----VR 119
A++L+ +M G P+V TY +LI+G C R+ E + L M PN T +R
Sbjct: 213 AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILR 272
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGD 178
S+ R +D K L+ M R+ + +V N L+ L + A IL KM
Sbjct: 273 SMCS-TGRWMDAEK----LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPM 327
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P S +++ + ++ LD + RG P TY L+ AL K G+
Sbjct: 328 HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDV 387
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
LN + + +YN VID KV +RA ++ EMR + + P+++T+++L+S
Sbjct: 388 AVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVS 447
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G ++ +V + + L G +P+ T+NS++ LC++ + + A+D L+ M+ P
Sbjct: 448 GLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKP 507
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKM 386
TY ILI + G +L L ++
Sbjct: 508 TEATYTILIEGIAYEGLAKEALDLLNEL 535
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 143/272 (52%), Gaps = 3/272 (1%)
Query: 230 LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
L + G +G ++L + + ++ +I FC++ +AT + + P+
Sbjct: 67 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
++T+N LISG+CK E+ ++L + PD T+N+++ LC + + + A++ L
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
++ P+ ITY ILI + C V ++++L +M+ PD+ T+N LI C+
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
++++A K +M + G +P+ +++ +++++ +GR+ +A++ M + GC+P T N
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+++ L +QG A DI++ G + S
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSL 335
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 161/349 (46%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P Y +I+A K + + A +M KPD TYN+LI+GIC+ G +DEA++
Sbjct: 192 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 251
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ M G PNV T+ I++ C+ R + ++L M + P+ T L++ + R
Sbjct: 252 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 311
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+A ++L + L N LL+ A L M RG P+ T
Sbjct: 312 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 371
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ +T L ++ IL+ +G P TY +++ L K G+ + L+ +
Sbjct: 372 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 431
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ L ++ +Y+ ++ + +D A + ++ I PN +T+N+++ G CK +
Sbjct: 432 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 491
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ + L ++ KP + T+ +I+ + ++ALD L+E+ G+
Sbjct: 492 RAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 540
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN ++ AL K +D+A Q+S C P TYN +I G+ ++G + A
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 423
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+ +M G P++ TY+ L+ G +V E + ++ + PN T S++ G
Sbjct: 424 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 483
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A + L + + + L+ ++ +A EA +L ++ RG + +
Sbjct: 484 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKK 543
Query: 185 SSTFDYTV 192
SS V
Sbjct: 544 SSAEQVAV 551
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 111/259 (42%), Gaps = 2/259 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SPS +N +I+ L + + A ++M + C P+ +YN L+HG C+ +D A
Sbjct: 294 GCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRA 353
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + M G P++ TY L+ C +V +L + + P T +++ G
Sbjct: 354 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG 413
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +A +LL M R+ L ++ ++L+ LS EA + G P
Sbjct: 414 LSKVGKTERAIKLLDE-MRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRP 472
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + L + L I + KP +TY +L+E + G E L
Sbjct: 473 NAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLL 532
Query: 244 NHVFKDRLVSNVNSYNMVI 262
N + LV ++ + +
Sbjct: 533 NELCSRGLVKKSSAEQVAV 551
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 67/144 (46%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G SP YN VID L K + A +M KPD TY+ L+ G+ R G
Sbjct: 395 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 454
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VDEA++ +EGLG PN TY ++ G C +++ L M + P EAT
Sbjct: 455 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 514
Query: 121 LVHGVFRCLDPHKAFELLIRFMER 144
L+ G+ +A +LL R
Sbjct: 515 LIEGIAYEGLAKEALDLLNELCSR 538
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 227/485 (46%), Gaps = 37/485 (7%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N +++AL K +D + +M D TYN L++ CR G+V EA LV M G
Sbjct: 228 NIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAG 287
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G P ++TY LI+G C RVL+ M +CPN AT ++ R D +
Sbjct: 288 KGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWE 347
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A + ++R + + ++++ S N A A KM G +P++ + T
Sbjct: 348 AERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIY----T 403
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD-RYLNHVFKDRLV 252
L+ G Y DV G + N + + V
Sbjct: 404 ILING--------------------------------YCRNDDVSGALKMRNEMVERGCV 431
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+V +YN +++ C+ M+D A E+ +EM +R + P+ T TLI G+CKD + K L
Sbjct: 432 MDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSL 491
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+ KPD T+N+++D C+ E A + +M+ + P+ I+++ILI C+
Sbjct: 492 FETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCS 551
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
+G V+ + RL+ +M+ I P + T N +I+ + R + KA +M++ G+ PD +
Sbjct: 552 LGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCIT 611
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y+ LI + +K FD A +ME+ G P+ T N IL + GR +EA ++
Sbjct: 612 YNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMI 671
Query: 493 ERGIS 497
++GI+
Sbjct: 672 DKGIN 676
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 221/461 (47%), Gaps = 2/461 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ YN +++A + + A+ M+ KP FTYN LI+G+C+ G + A
Sbjct: 254 GVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERA 313
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++ +M G+G PN T+ ++ C + V E RV M +R V P+ + S+V G
Sbjct: 314 KRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIV-G 372
Query: 125 VF-RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
VF R + +A + + ++ L+ N S A + +M +RG +
Sbjct: 373 VFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVM 432
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + L G L++ + ++RGV P F T L+ K G +
Sbjct: 433 DVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLF 492
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ L +V +YN ++D FCKV M++A E+ +M R+I P+ ++F+ LI+G C
Sbjct: 493 ETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSL 552
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V + L + E G KP T N++I RA A D L+ M+ GVPP+ ITY
Sbjct: 553 GLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITY 612
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI S + R+ L M+ + P++ T+NA++ F R ++++AE M+
Sbjct: 613 NTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMID 672
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
G+ PD +Y++LI + EA + M Q G PD
Sbjct: 673 KGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/452 (21%), Positives = 197/452 (43%), Gaps = 35/452 (7%)
Query: 80 VYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLI 139
V + +LI + A+++ E +++++R C + +L+ + + A+++
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 140 RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL 199
F++ + N ++ L + L +M ++G + T++ V
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
++E G++D +G+KP TY L+ L K G R L+ + L N ++N
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
++ C+ + A + EM R + P+L++F++++ ++ E+ + +
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL--------- 370
G PD + +I+ CR AL +EMVE G + +TYN L+ L
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDA 453
Query: 371 --------------------------CAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
C G++ ++L LF+ M + PD+ T+N L+
Sbjct: 454 DELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDG 513
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
FC++ ++EKA++ ++ M++ + P S+S LI G EA + + M++ G P
Sbjct: 514 FCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPT 573
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
T N I++ ++ G +A+D + T G+
Sbjct: 574 LVTCNTIIKGYLRAGNLSKANDFLNTMISEGV 605
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 181/385 (47%), Gaps = 17/385 (4%)
Query: 113 PNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAI 172
PN + + +L+H + + +A LL+R + + ++ V ++L+ S+N +++ +
Sbjct: 97 PNPSIIATLIHFLVQSKKLPEAQSLLLRIIRKSGVSHVEVIDSLISTSSSNLNSNQNVVV 156
Query: 173 LRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK 232
FD + V L E KRG + L+ A+ K
Sbjct: 157 ---------------FDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVK 201
Query: 233 AGR-DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
G D+ Y + V +V NV + N++++ CK +D EM ++ + +LV
Sbjct: 202 VGWVDLAWKVYEDFVKSGNIV-NVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLV 260
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
T+NTL++ +C+ V + L+ + G KP FT+N++I+ LC+ +E A L EM
Sbjct: 261 TYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEM 320
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
+ G+ PN T+N ++ C DV + R+F +M + PD+ +F++++ F R ++
Sbjct: 321 LGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGEL 380
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
+A F M +GL PD Y+ LI ++ A + M + GC D T N +
Sbjct: 381 GRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTL 440
Query: 472 LETLVQQGRFEEAHDIVKTSKERGI 496
L L + ++A ++ K ERG+
Sbjct: 441 LNGLCRGKMLDDADELFKEMVERGV 465
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 158/356 (44%), Gaps = 35/356 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P T +Y +I+ +++ + A +M C D TYN L++G+CR ++D+
Sbjct: 393 VGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDD 452
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L K+M G P+ YT T LI G+C + + + E M R++ P+ T +L+
Sbjct: 453 ADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMD 512
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + + KA EL + RE + + L+ + + SEA + +M ++G P
Sbjct: 513 GFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKP 572
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T + + + +L++ L+T I GV P T
Sbjct: 573 TLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCIT--------------------- 611
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
YN +I+ F K DRA + M +R + PNLVT+N ++ G +
Sbjct: 612 --------------YNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRH 657
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ + +L +++ G PDK T+ S+I+ ++A EM++ G P+
Sbjct: 658 GRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 225/451 (49%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
+YNI+IH +C++G ++EA L+ ME GY P+V +Y+ +I+G+C + +V++++E M
Sbjct: 671 SYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKM 730
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
K++ + PN T S++ + R +A E + + L +V TL+
Sbjct: 731 KQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDI 790
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
A+ +M R P+ T+ ++ D+ E + + RG++P T+ L
Sbjct: 791 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTEL 850
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
M KAG + R NH+ + NV +Y +ID CK +D A E+ EM +
Sbjct: 851 MNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 910
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN+ T+N++++G CK + + +L+ G D T+ +++D C++ + A +
Sbjct: 911 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 970
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L+EM+ G+ P +T+N+L+ C G + +L M A I+P+ TFN L++ +C
Sbjct: 971 ILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYC 1030
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
N ++ A + M + G+ PD +Y L+K + EA F M+ G +
Sbjct: 1031 IRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVS 1090
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T +++++ ++ +F EA +I + G++
Sbjct: 1091 TYSVLIKGFFKRKKFVEAREIFDQMRRDGLA 1121
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 140/243 (57%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV SYN+VI C++ ++ A + M + P++++++T+I+G+C+ E+ K +L+
Sbjct: 668 NVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLI 727
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ + G KP+ +T+ S+I LCR + +A + SEM+ G+ P+TI Y L+ C
Sbjct: 728 EKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKR 787
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
GD+ + + F +M + I+PD+ T+ A+I FC++ + +A K F ML GL PD ++
Sbjct: 788 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITF 847
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ L+ K+G +A + M Q GC+P+ T +++ L ++G + A++++ +
Sbjct: 848 TELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 907
Query: 494 RGI 496
G+
Sbjct: 908 IGL 910
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 163/384 (42%), Gaps = 35/384 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P T +Y ++D K I A F +M PD TY +I G C+IG + EA
Sbjct: 769 GILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 828
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L +M G P++ T+T L++G+C A + + FRV M + PN T +L+ G
Sbjct: 829 GKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDG 888
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + D A ELL + N+++ L + EA ++ + G +
Sbjct: 889 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 948
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T+ + ++++ IL + +G++P T+ +LM G +G++ LN
Sbjct: 949 TVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 1008
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP------NLV------- 291
+ + N ++N ++ +C N + AT I ++M R + P NLV
Sbjct: 1009 WMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNAR 1068
Query: 292 ----------------------TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
T++ LI G K + + RE+ + G DK F+
Sbjct: 1069 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFD 1128
Query: 330 SMIDCLCRAHRFEDALDCLSEMVE 353
D + R + +D + E++E
Sbjct: 1129 FFSDTKYKGKRPDTIVDPIDEIIE 1152
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 68/150 (45%), Gaps = 3/150 (2%)
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR-MNKI 411
+WG P +++ + L G + + ++F+KM + + + N + + NK
Sbjct: 593 DWGSDPRV--FDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKT 650
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
A F +G+ + SY+ +I + + GR +EA L ME G PD + + +
Sbjct: 651 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTV 710
Query: 472 LETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ + G ++ +++ K++G+ S+
Sbjct: 711 INGYCRFGELDKVWKLIEKMKQKGLKPNSY 740
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 135/472 (28%), Positives = 232/472 (49%)
Query: 24 NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTY 83
++ID A F ++ P +N+++ I ++ A+ L KQM G P++ T
Sbjct: 57 DAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTL 116
Query: 84 TILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME 143
+ILI+ +C+ + F VL ++ +R N T+ +++ G+ + KA E +
Sbjct: 117 SILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVA 176
Query: 144 REPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
+ L ++ TL+ L + EA +L KM + P ++ V L + E
Sbjct: 177 QGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTE 236
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
+ + RG+ P TY L+ G+ E R L + + NV +YN++ID
Sbjct: 237 ARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILID 296
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
CK M+ +A ++ M +R P+LVTFNTL+SG+C +V + R+L ECG P
Sbjct: 297 ALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITP 356
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D +++N +I C+ +R ++AL ++M + PN +TY+ LI LC G ++ + LF
Sbjct: 357 DVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELF 416
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+ SP++ T+N ++ + C++ ++KA + F M GL P+ SY+ LI KS
Sbjct: 417 SAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKS 476
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
R DEA F M + PDS T N +++ L + GR A ++ + G
Sbjct: 477 KRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGG 528
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 181/399 (45%), Gaps = 35/399 (8%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D TY LI+G+C+IG+ EA L+ +MEG PNV Y +++DG C V E +
Sbjct: 182 DEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLY 241
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
+ R + P+ T L+HG + LL ++R N L+ L
Sbjct: 242 SDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKK 301
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
M +A + M +RG P+ TF+ ++ D+ E + DTF + G+ P
Sbjct: 302 GMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITP----- 356
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
+V SYN++I +CK N +D A + +M
Sbjct: 357 ------------------------------DVWSYNILIIGYCKNNRIDEALSLFNKMNY 386
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
+ +APN+VT+++LI G CK + EL + + G P+ T+N M+D LC+ +
Sbjct: 387 KKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDK 446
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A++ + M E G+ PN +YNILI C + ++ LF++M + PD T+N LI
Sbjct: 447 AIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLID 506
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
C+ +I A + F M G D +Y+ L A K
Sbjct: 507 GLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSK 545
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 177/399 (44%), Gaps = 35/399 (8%)
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A L R + PL + N +L + A ++ ++MG RG P T +
Sbjct: 62 AVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILIN 121
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
C + +L +KRG + T +M+ L G + + + V +
Sbjct: 122 CYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLL 181
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+ +Y +I+ CK+ + A E+ +M + + PN+V +N ++ G CKD V + R+L
Sbjct: 182 DEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLY 241
Query: 314 VMLLECGFKPDKFTF-----------------------------------NSMIDCLCRA 338
++ G PD FT+ N +ID LC+
Sbjct: 242 SDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKK 301
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
A D + M+E G P+ +T+N L+ C DV + +LF I+PD++++
Sbjct: 302 GMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSY 361
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
N LI +C+ N+I++A F M L P+ +YS+LI L KSGR A + F ++
Sbjct: 362 NILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHD 421
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G +P+ T N++L+ L + ++A ++ ERG++
Sbjct: 422 GGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLT 460
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 79/152 (51%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P+ Y+++ID L KS I A+ F + P+ TYNI++ +C+I +VD+A+
Sbjct: 389 LAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAI 448
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L M G PNV +Y ILI+G+C +KR+ E + E M RN+ P+ T L+ G+
Sbjct: 449 ELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGL 508
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLL 157
+ A+EL + P + N L
Sbjct: 509 CKSGRISHAWELFNVMHDGGPPVDVITYNILF 540
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ YN +I+ KS ID A F++M PD TYN LI G+C+ G + A
Sbjct: 458 GLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHA 517
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRV 96
L M G +V TY IL D F + V
Sbjct: 518 WELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 240/493 (48%), Gaps = 2/493 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S Y VI + N A+ F++M PD +N LIH +CR G V E+
Sbjct: 176 GCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQES 235
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL+ ++ G +PN++T I I GFC + E R+L+ + R + P+ T +L+ G
Sbjct: 236 ERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVG-RGLTPDVITYNTLICG 294
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A L + + N+++ M A ILR +G++P+
Sbjct: 295 LCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPD 354
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
ST+ + L D++ + + +++G+KP L++ L + G ++ + +N
Sbjct: 355 ESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMN 414
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ ++ +YN+VI+ CK+ + A + + + P++ TFNTLI G+CK
Sbjct: 415 EMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKL 474
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ E++ + G PD T+NS+++ LC+A ++ED + M+E G PN ITYN
Sbjct: 475 KLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYN 534
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM-LT 423
IL S C V +L L ++MQ ++PD+ F L++ FC ++ A + F +
Sbjct: 535 ILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQ 594
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+Y+ +I A + A++ F M +NG +PDSYT ++++ + G
Sbjct: 595 YKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINS 654
Query: 484 AHDIVKTSKERGI 496
+ + E+G+
Sbjct: 655 GYSFLLVKIEKGL 667
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 229/465 (49%), Gaps = 1/465 (0%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F++M C+P +YN +++ + D+A ++ +M G P+VYT+TI + FC
Sbjct: 99 FERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCR 158
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
R R+L M + + +++ G + +A EL + +
Sbjct: 159 TSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMA 218
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
N L++ L E+ +L K+ RG P T + + LNE +LD +
Sbjct: 219 FNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDG-V 277
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
RG+ P TY L+ L K + VE + YL + + + +YN +ID +CK+ MM
Sbjct: 278 GRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQ 337
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A +I R+ + P+ T+ +LI+G C+D ++ + + +E G KP+ N+++
Sbjct: 338 NADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLV 397
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
L + AL ++EM E G P+ TYN++I LC IG V+ + L A
Sbjct: 398 KGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHL 457
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PD++TFN LI +C+ K++ A + M G+ PD +Y++++ L K+G++++ T
Sbjct: 458 PDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGT 517
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
F M + GC P+ T N++ E+ + + EEA ++++ + +G++
Sbjct: 518 FKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLT 562
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 186/429 (43%), Gaps = 40/429 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P YN +I L K+ + A ++M + +PD FTYN +I G C++G++ A
Sbjct: 280 GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNA 339
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++++ G+ P+ TY LI+G C + V E+ + PN +LV G
Sbjct: 340 DQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKG 399
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A +L+ E N ++ L S+A ++ +G+LP+
Sbjct: 400 LSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPD 459
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR--DVEGDRY 242
TF+ + L L+ I+D GV P TY ++ L KAG+ DV G
Sbjct: 460 VFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFK 519
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + + V N+ +YN++ + FCK ++ A + EM+++ + P++V F TL+ G C
Sbjct: 520 L--MMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCD 577
Query: 303 DAEVHKTRELL-----------------VM-------------------LLECGFKPDKF 326
+ ++ +L +M + E GF PD +
Sbjct: 578 NGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSY 637
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+ MID C+ L +E G+ P+ T+ ++ LC V ++ + M
Sbjct: 638 TYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLM 697
Query: 387 QADRISPDI 395
I P++
Sbjct: 698 VHKGIVPEV 706
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 163/363 (44%), Gaps = 3/363 (0%)
Query: 2 SFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
+F G P Y ++I+ L + ID A F + KP+ N L+ G+ + G++
Sbjct: 347 AFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLI 406
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
+AL+L+ +M G +P+++TY ++I+G C V++ ++ + P+ T +L
Sbjct: 407 LQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTL 466
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ G + L A E++ R + N++L L + + M ++G
Sbjct: 467 IDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGC 526
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P T++ + E +++ +G+ P + LM+ G D++G
Sbjct: 527 VPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNG-DLDGAY 585
Query: 242 YLNHVFKD--RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L + + + +YN++I+ F M+ A ++ +M + +P+ T+ +I G
Sbjct: 586 QLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDG 645
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK ++ L++ +E G P TF +++CLC R +A+ + MV G+ P
Sbjct: 646 FCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPE 705
Query: 360 TIT 362
+
Sbjct: 706 VVN 708
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 77/161 (47%)
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
R + ++A+D M + P+ +YN ++ L ++ +++ +M+ I PD+Y
Sbjct: 88 RKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVY 147
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
TF ++SFCR ++ A + +M + G +Y +I + EA + F M
Sbjct: 148 TFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEM 207
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G PD N ++ TL ++G +E+ ++ +RG+S
Sbjct: 208 LGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVS 248
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 46/94 (48%)
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
++++ R KI++A F M P SY+A++ L++ FD+A + ++ M G
Sbjct: 83 MRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGI 142
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
PD YT + +++ + R A ++ +G
Sbjct: 143 VPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQG 176
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 237/489 (48%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P +N ++D+ K A ++ + +PD FT NILI+ C +G + +
Sbjct: 305 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSV 364
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ GY P+ T LI G C +V + + + + N+ + +L++GV +
Sbjct: 365 LAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 424
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D A +LL + R + +T++ L + SEA + +M +G + T
Sbjct: 425 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 484
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + L E G+L+ + + + P TY +L++AL K G+ E L +
Sbjct: 485 YSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVML 544
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K + +V +YN +++ + V + +A + M + P++ T+ LI+G CK V
Sbjct: 545 KACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVD 604
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ L + + PD T++S++D LC++ R D + EM + G P + ITYN LI
Sbjct: 605 EALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLI 664
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G + +++ LF KM+ I P+ +TF L+ C+ +++ A++ F +LT G
Sbjct: 665 DGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 724
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
D + Y+ +I K G +EA ME+NGC P++ T ++I+ L ++ ++A +
Sbjct: 725 LDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKL 784
Query: 488 VKTSKERGI 496
++ RG+
Sbjct: 785 LRQMIARGL 793
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 144/569 (25%), Positives = 242/569 (42%), Gaps = 81/569 (14%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ +YN +IDAL K + AY F +M+V + TY+ LI+G C +G + EAL L
Sbjct: 131 PNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGL 190
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCN------AKRVAEV--------------------FR 101
+ M PNV TY IL+D C AK V V F
Sbjct: 191 LNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFL 250
Query: 102 VLEIMKERNV---------CPNEATVRSLVHGVFRCLDPHKAFEL-----LIRFMEREPL 147
V E+ K ++V P+ + +++G + KA L L RF P+
Sbjct: 251 VYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRF---PPI 307
Query: 148 TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGI 207
Q N +L + S A ++ ++ +G P+ T + + C + +
Sbjct: 308 IQ---FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSV 364
Query: 208 LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG----DRYLNHVFKDRLVS---------- 253
L +KRG P T L++ L G+ + D+ L F+ VS
Sbjct: 365 LAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 424
Query: 254 ---------------------NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
NV Y+ +ID CK ++ A + EM + I+ ++VT
Sbjct: 425 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 484
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
++TLI G C ++ + LL ++ PD T+ ++D L + + ++A L+ M+
Sbjct: 485 YSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVML 544
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
+ V P+ TYN L+ + +V ++ +F M ++PD++T+ LI FC+ ++
Sbjct: 545 KACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVD 604
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
+A F M + PD +YS+L+ L KSGR M G D T N ++
Sbjct: 605 EALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLI 664
Query: 473 ETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ L + G ++A + K++GI +F
Sbjct: 665 DGLCKNGHLDKAIALFNKMKDQGIRPNTF 693
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/487 (23%), Positives = 215/487 (44%), Gaps = 7/487 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T N +I L + A ++ + ++ +Y LI+G+CRIG A
Sbjct: 58 GYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAA 117
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +++++G PNV Y +ID C + V+E + + M + + N T +L++G
Sbjct: 118 IKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYG 177
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+A LL + + N L+ L EA ++L M
Sbjct: 178 FCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSN 237
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + ++ + + + GV P +Y +++ K R D+ LN
Sbjct: 238 VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRV---DKALN 294
Query: 245 HVFKDRLVSN---VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+FK+ ++S + +N ++D F K+ A + + + I P+L T N LI+ C
Sbjct: 295 -LFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFC 353
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
++ +L +L+ G+ P T N++I LC + + AL +++ G N +
Sbjct: 354 HMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQV 413
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
+Y LI +C IGD +++L +K+ P++ ++ +I + C+ + +A F M
Sbjct: 414 SYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEM 473
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G+ D +YS LI G+ EA M NPD T ++++ L ++G+
Sbjct: 474 TVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKV 533
Query: 482 EEAHDIV 488
+EA ++
Sbjct: 534 KEAKSVL 540
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 157/325 (48%), Gaps = 1/325 (0%)
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
++L K+ RGY P++ T + + L + E D + +G + +Y L+ +
Sbjct: 49 SVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGV 108
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
+ G ++L + NV YN +ID CK ++ A + EM + I+ N+
Sbjct: 109 CRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANV 168
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
VT++TLI G C ++ + LL +++ P+ T+N ++D LC+ + ++A L+
Sbjct: 169 VTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAV 228
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M++ V N ITY+ L+ + +V ++ +F M ++PD++++N +I FC++ +
Sbjct: 229 MLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKR 288
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
++KA F M+ L P ++ ++ + K + A +E G PD +T N+
Sbjct: 289 VDKALNLFKEMI-LSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNI 347
Query: 471 ILETLVQQGRFEEAHDIVKTSKERG 495
++ G+ ++ +RG
Sbjct: 348 LINCFCHMGQITFGFSVLAKILKRG 372
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 143/320 (44%), Gaps = 43/320 (13%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P R Y ++DAL K + A M KPD FTYN L++G + V +A
Sbjct: 513 INPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQ 572
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M +G P+V+TYTILI+GFC +K V E + + M ++N+ P+ T SLV G+
Sbjct: 573 HVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGL 632
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ ++L+ +R + N+L+ L N +A A+ KM D+G
Sbjct: 633 CKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQG----- 687
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
++P T+ +L++ L K GR +
Sbjct: 688 ------------------------------IRPNTFTFTILLDGLCKGGRLKDAQE---- 713
Query: 246 VFKDRLVS----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
VF+D L +V YN++I CK +++ A + +M + PN VTF+ +I+
Sbjct: 714 VFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALF 773
Query: 302 KDAEVHKTRELLVMLLECGF 321
K E K +LL ++ G
Sbjct: 774 KKDENDKAEKLLRQMIARGL 793
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S +G++P Y +I+ KS +D A F++M PD TY+ L+ G+C+ G
Sbjct: 578 MSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGR 637
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ L+ +M G +V TY LIDG C + + + MK++ + PN T
Sbjct: 638 ISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTI 697
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G+ + A E+ + + + N ++Y + EA +L KM + G
Sbjct: 698 LLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENG 757
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
+P + TFD + L + ++ +L I RG+
Sbjct: 758 CIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%)
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
D A SL + K+ PD T N LI+ C ++++A +L G + + SY+
Sbjct: 43 DDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYA 102
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
LI + + G A + ++ P+ N I++ L + EA+ + +
Sbjct: 103 TLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVK 162
Query: 495 GIS 497
GIS
Sbjct: 163 GIS 165
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 230/492 (46%), Gaps = 36/492 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP YN ++ A + + A +M + P R TYN L+ R+G + +A
Sbjct: 240 GLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQA 299
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN-VCPNEATVRSLVH 123
+V+ M G+ P+++TY +L G C A +V E F++ + M+ + V P+ T +LV
Sbjct: 300 TNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVD 359
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
F+ Y+ S S+A +L +M D+G
Sbjct: 360 ACFK------------------------------YQRS-----SDALNLLEEMRDKGVKS 384
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T + V L L E G L + G+ P TY L++A KA + +
Sbjct: 385 SLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLM 444
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + L + + N ++ CK + A E+ R R P+ V++ T+++ + K+
Sbjct: 445 DEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKE 504
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ L + + P +T+N++I LC + +A+D L+E+++ G+ P+ TY
Sbjct: 505 NKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTY 564
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI+I + C GD+ ++ + KM + PD+ T N L+ C K+EKA K F S
Sbjct: 565 NIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAE 624
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G + D +Y+ LI+AL K G D A F ME G PD++T N++L L + GR EE
Sbjct: 625 KGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEE 684
Query: 484 AHDIVKTSKERG 495
A +++ E G
Sbjct: 685 AQNMLHKLDESG 696
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 118/513 (23%), Positives = 197/513 (38%), Gaps = 107/513 (20%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P+ YN ++ A + I A + M+ +PD +TYN+L G+C+ G VDEA
Sbjct: 275 GIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEA 334
Query: 65 LRLVKQMEGLG-YAPNVYTYTILID----------------------------------- 88
+L +ME L +P+V TY L+D
Sbjct: 335 FKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVK 394
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
G C ++ E L++M E + P+ T +L+ + + KAF L+ +
Sbjct: 395 GLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKM 454
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
NTLLY L EA +LR RG++P+ ++ + +
Sbjct: 455 DTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLW 514
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
D KR + P TY L++ L G+ E LN + K LV + +YN++I +CK
Sbjct: 515 DEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKE 574
Query: 269 NMMDRATEICREMRDRDIAPNLVT-----------------------------------F 293
+++A + +M + P++VT +
Sbjct: 575 GDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITY 634
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL----- 348
NTLI CKD +V + G +PD FT+N ++ L A R E+A + L
Sbjct: 635 NTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDE 694
Query: 349 ----------------SEMVEWGVPP---------------NTITYNILIRSLCAIGDVA 377
+E V+ G P + +YN ++ LC G +
Sbjct: 695 SGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLK 754
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
+ + +M +S D T+ L++ + K
Sbjct: 755 EAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQK 787
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 151/516 (29%), Positives = 243/516 (47%), Gaps = 25/516 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +PS YNAV+ AL + S+ A M P+ +TYNIL+ +C G ++EA
Sbjct: 113 GYAPSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER-NVCPNEATVRSLVH 123
+ +V M G G APN TY L+ FC A + RV+ +M+E N PN T S+V+
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 124 GV---FRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDR 179
G+ R K F+ ++R E L +V NTLL E+ A+ +M R
Sbjct: 232 GLCKAGRMEGARKVFDEMVR----EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR 287
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G +P+ TF + +L + ++ +RG++ T+ L++ K G +
Sbjct: 288 GLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDA 347
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + K + +V YN +I+ +CK+ MD A E+ REM + + P++VT++T+ISG
Sbjct: 348 LLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISG 407
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+CK + +L +L+ G PD T++S+I LC R DA + M++ GV P+
Sbjct: 408 YCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPD 467
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
TY LI C G+V ++L L +M + PD+ T++ LI + + ++A + F
Sbjct: 468 EFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLF 527
Query: 420 SMLTLGLRPDNFSYSALI----KALIKS-----------GRFDEAKQTFLSMEQNGCNPD 464
+ PDN Y AL+ KA KS G EA + + SM D
Sbjct: 528 KLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLD 587
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
++++ + G +A K G S S
Sbjct: 588 GSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNS 623
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 15/147 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P Y +ID K +++ A +M PD TY++LI+G+ + E
Sbjct: 462 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521
Query: 64 ALRLVKQMEGLGYAPNVYTY---------------TILIDGFCNAKRVAEVFRVLEIMKE 108
A RL+ ++ P+ Y L+ GFC + E +V + M +
Sbjct: 522 AHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLD 581
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAF 135
RN + + L+HG R + KA
Sbjct: 582 RNWKLDGSVYSILIHGHCRGGNVRKAL 608
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 34/132 (25%)
Query: 398 FNALIQSFCRMNK----------------------------------IEKAEKAFFSMLT 423
F+ALI+S+ + + + A + SML
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDASLPSARRFLSSMLR 145
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ P+ ++Y+ L++AL GR +EA M GC P++ T N ++ + G +
Sbjct: 146 HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDG 205
Query: 484 AHDIVKTSKERG 495
A +V +E G
Sbjct: 206 AERVVSLMREEG 217
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 139/491 (28%), Positives = 239/491 (48%), Gaps = 5/491 (1%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ + V+ AL N +D A + M+ C P+ Y LIH + + V+EAL
Sbjct: 207 IPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 266
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+L+++M +G P+ T+ +I G C R+ E +++ M R P++ T L++G+
Sbjct: 267 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGL 326
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDRGYLPE 184
+ A +L R P ++ NTL++ + +A A+L M G +P+
Sbjct: 327 CKIGRVDAAKDLFYRI----PKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 382
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + +L +G KP +Y +L++ K G+ E LN
Sbjct: 383 VCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLN 442
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D L N +N +I FCK + + A EI REM + P++ TFN+LISG C+
Sbjct: 443 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 502
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E+ LL ++ G + T+N++I+ R ++A ++EMV G + ITYN
Sbjct: 503 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYN 562
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI+ LC G+V ++ LF+KM D + P + N LI CR +E+A + M+
Sbjct: 563 SLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLR 622
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G PD ++++LI L ++GR ++ F ++ G PD+ T N ++ L + G +A
Sbjct: 623 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDA 682
Query: 485 HDIVKTSKERG 495
++ E G
Sbjct: 683 CLLLDEGIEDG 693
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 141/490 (28%), Positives = 225/490 (45%), Gaps = 5/490 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ + YN V++ LV N +A F M + P FT+ +++ +C + VD AL +
Sbjct: 174 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSV 233
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ M G PN Y LI RV E ++LE M P+ T ++ G+ +
Sbjct: 234 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 293
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
++A +++ R + R + L+ L A + ++ P S
Sbjct: 294 FDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PTSVI 349
Query: 188 FDYTVTCLVTGLDLNETCGIL-DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
F+ + VT L++ +L D G+ P TY L+ +K G L +
Sbjct: 350 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDM 409
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
NV SY +++D FCK+ +D A + EM + PN V FN LIS CK+ +
Sbjct: 410 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRI 469
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ E+ + G KPD +TFNS+I LC + AL L +M+ GV NT+TYN L
Sbjct: 470 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 529
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I + G++ + +L +M D T+N+LI+ CR +++KA F ML GL
Sbjct: 530 INAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGL 589
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P + S + LI L +SG +EA + M G PD T N ++ L + GR E+
Sbjct: 590 VPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 649
Query: 487 IVKTSKERGI 496
+ + + GI
Sbjct: 650 MFRKLQAEGI 659
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 210/453 (46%), Gaps = 9/453 (1%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
+G P +N VI L K + I+ A +M + PD TY L++G+C+IG VD
Sbjct: 274 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVD 333
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL-EIMKERNVCPNEATVRSL 121
A L ++ P + LI GF R+ + VL +++ + P+ T SL
Sbjct: 334 AAKDLFYRIP----KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 389
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRG 180
++G ++ A E+L R M + + T+L EA +L +M G
Sbjct: 390 IYGYWKKGLVGLALEVL-RDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADG 448
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P + F+ ++ + E I ++G KP T+ L+ L +
Sbjct: 449 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 508
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L + + +V+N +YN +I+ F + + A ++ EM + + +T+N+LI G
Sbjct: 509 WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGL 568
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ EV K R L +L G P + N +I+ LCR+ E+A++ EMV G P+
Sbjct: 569 CRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDI 628
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+T+N LI LC G + L +F+K+QA+ I PD T+N L+ C+ + A
Sbjct: 629 VTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDE 688
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
+ G P++ ++S L+++L+ D ++TF
Sbjct: 689 GIEDGFVPNDRTWSILLQSLVPQETLD--RRTF 719
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 171/370 (46%), Gaps = 35/370 (9%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ GI P YN++I K + LA + M CKP+ ++Y IL+ G C++G
Sbjct: 374 VTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGK 433
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+DEA L+ +M G PN + LI FC R+ E + M + P+ T S
Sbjct: 434 IDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 493
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G+ + A LL R+ +++ +V NT+ Y N A LR RG
Sbjct: 494 LISGLCEVDEIKHALWLL-----RDMISEGVVANTVTYNTLIN-------AFLR----RG 537
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ E+ +++ + +G TY L++ L +AG +
Sbjct: 538 EIKEARK-------------------LVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKAR 578
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ +D LV + S N++I+ C+ M++ A E +EM R P++VTFN+LI+G
Sbjct: 579 SLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 638
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ + + L G PD T+N+++ LC+ DA L E +E G PN
Sbjct: 639 CRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPND 698
Query: 361 ITYNILIRSL 370
T++IL++SL
Sbjct: 699 RTWSILLQSL 708
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 87/181 (48%)
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
TR +L M +P ++N +++ L + + A + +M+ +PP T+ ++
Sbjct: 158 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 217
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+++LCA+ +V +L + + M P+ + LI S + N++ +A + M +G
Sbjct: 218 MKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 277
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
PD +++ +I L K R +EA + M G PD T ++ L + GR + A D
Sbjct: 278 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKD 337
Query: 487 I 487
+
Sbjct: 338 L 338
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%)
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P +YN+++ L + + +F M + +I P ++TF ++++ C +N+++ A
Sbjct: 174 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSV 233
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
M G P++ Y LI +L K R +EA Q M GC PD+ T N ++ L +
Sbjct: 234 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 293
Query: 478 QGRFEEAHDIVKTSKERGIS 497
R EA +V RG +
Sbjct: 294 FDRINEAAKMVNRMLIRGFT 313
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 240/493 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ + + +I+ + + LA+ ++ +P+ T++ LI+G+C G V EA
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L LV +M +G+ P++ T L++G C + + AE +++ M E PN T +++
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A ELL + ER + + ++ L + A + +M +G
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + ++ +L IKR + P T+ +L+++ K G+ E +
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + +Y +ID FCK N +D+A ++ M + PN+ TFN LI+G+CK
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ EL + G D T+N++I C + A + EMV VPPN +TY
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 477
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
IL+ LC G+ ++L +F+K++ ++ DI +N +I C +K++ A F S+
Sbjct: 478 ILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G++P +Y+ +I L K G EA+ F ME++G PD +T N+++ + G ++
Sbjct: 538 GVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKS 597
Query: 485 HDIVKTSKERGIS 497
+++ K G S
Sbjct: 598 VKLIEELKRCGFS 610
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 247/490 (50%), Gaps = 4/490 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ ++ + A+ K+ DL +QM + + +T +I+I+ CR + A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ LGY PN T++ LI+G C RV+E +++ M E P+ T+ +LV+G+
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGL-- 203
Query: 128 CLDPHKAFELLI--RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
CL +A +L+ + +E + +L + + + A +LRKM +R ++
Sbjct: 204 CLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+ + L L+ + + +G+ TY +L+ AGR +G + L
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 323
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ K ++ NV +++++ID F K + A E+ +EM R IAP+ +T+ +LI G CK+
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ K +++ +++ G P+ TFN +I+ C+A+R +D L+ +M GV +T+TYN
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI+ C +G + + LFQ+M + ++ P+I T+ L+ C + EKA + F +
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ D Y+ +I + + + D+A F S+ G P T N+++ L ++G EA
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 486 DIVKTSKERG 495
+ + +E G
Sbjct: 564 LLFRKMEEDG 573
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 207/452 (45%), Gaps = 39/452 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y V++ + KS LA ++M K D Y+I+I G+C+ G +D A
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +ME G N+ TY ILI GFCNA R + ++L M +R + PN T
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT------- 335
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F +LI +E EA + ++M RG P+
Sbjct: 336 ----------FSVLIDSFVKE------------------GKLREAEELHKEMIHRGIAPD 367
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T+ + L++ ++D + +G P T+ +L+ KA R +G
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +V++ +YN +I FC++ ++ A E+ +EM R + PN+VT+ L+ G C +
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E K E+ + + + D +N +I +C A + +DA D + GV P TYN
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 547
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+I LC G ++ + LF+KM+ D +PD +T+N LI++ K+ K +
Sbjct: 548 IMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRC 607
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
G D + +I ++ GR K++FL M
Sbjct: 608 GFSVDASTIKMVID-MLSDGRL---KKSFLDM 635
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 227/482 (47%), Gaps = 3/482 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P+T ++ +I+ L + A +M KPD T N L++G+C G E
Sbjct: 152 LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAE 211
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+ +M G PN TY +++ C + + A +L M+ERN+ + ++
Sbjct: 212 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + AF L ME + +T ++ N L+ N + A +LR M R
Sbjct: 272 GLCKHGSLDNAFNLF-NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P TF + V L E + I RG+ P TY L++ K + ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
++ + N+ ++N++I+ +CK N +D E+ R+M R + + VT+NTLI G C+
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+++ +EL ++ P+ T+ ++D LC E AL+ ++ + + +
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YNI+I +C V + LF + + P + T+N +I C+ + +AE F M
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G PD ++Y+ LI+A + G ++ + +++ G + D+ T ++++ L GR +
Sbjct: 571 EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRLK 629
Query: 483 EA 484
++
Sbjct: 630 KS 631
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 218/482 (45%), Gaps = 40/482 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+S RL + ++D + ++IDL F+ M + P ++ L I + D L
Sbjct: 54 LSYRERLRSGLVD-IKADDAIDL----FRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVL 108
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L KQME G A N+YT +I+I+ FC +++ F + + + PN T +L++G+
Sbjct: 109 ALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGL 168
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
CL+ SEA ++ +M + G+ P+
Sbjct: 169 --CLEGR---------------------------------VSEALELVDRMVEMGHKPDL 193
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T + V L E ++D ++ G +P TY ++ + K+G+ L
Sbjct: 194 ITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + + + Y+++ID CK +D A + EM + I N++T+N LI G C
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+LL +++ P+ TF+ +ID + + +A + EM+ G+ P+TITY
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI C + ++ ++ M + P+I TFN LI +C+ N+I+ + F M G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ D +Y+ LI+ + G+ + AK+ F M P+ T ++L+ L G E+A
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493
Query: 486 DI 487
+I
Sbjct: 494 EI 495
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 160/363 (44%)
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A +L + PL + + L ++ A+ ++M +G T +
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
C L + IK G +P T+ L+ L GR E ++ + +
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
++ + N +++ C A + +M + PN VT+ +++ CK + ELL
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ E K D ++ +ID LC+ ++A + +EM G+ N ITYNILI C
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G +L + M +I+P++ TF+ LI SF + K+ +AE+ M+ G+ PD +Y
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
++LI K D+A Q M GC+P+ T N+++ + R ++ ++ +
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 431
Query: 494 RGI 496
RG+
Sbjct: 432 RGV 434
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 154/374 (41%), Gaps = 39/374 (10%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y+ +ID L K S+D A+ F +M + + TYNILI G C G D+ +L++ M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
PNV T+++LID F ++ E + + M R + P+ T SL+ G C + H
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF--CKENH 383
Query: 133 --KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
KA +++ + + N L+ + + + RKM RG + ++ T++
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ LN + + R V P TY +L++ L G + + K +
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 251 L-----------------------------------VSNVNSYNMVIDCFCKVNMMDRAT 275
+ V +YN++I CK + A
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
+ R+M + AP+ T+N LI H D + K+ +L+ L CGF D T +ID L
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Query: 336 CRAHRFEDALDCLS 349
+ LD LS
Sbjct: 624 SDGRLKKSFLDMLS 637
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 127/266 (47%), Gaps = 5/266 (1%)
Query: 236 DVEGDRYLNHVFKD----RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
D++ D ++ +F+D R + V ++ + K D +C++M + IA NL
Sbjct: 66 DIKADDAID-LFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLY 124
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
T + +I+ C+ ++ + +++ G++P+ TF+++I+ LC R +AL+ + M
Sbjct: 125 TLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRM 184
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
VE G P+ IT N L+ LC G A ++ L KM P+ T+ ++ C+ +
Sbjct: 185 VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 244
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
A + M ++ D YS +I L K G D A F ME G + T N++
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Query: 472 LETLVQQGRFEEAHDIVKTSKERGIS 497
+ GR+++ +++ +R I+
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKIN 330
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 2/199 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ T YN +I + +++A FQ+M + P+ TY IL+ G+C G
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
++AL + +++E ++ Y I+I G CNA +V + + + + + V P T
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREP-LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
++ G+ + P ELL R ME + N L+ + A+++ ++ ++
Sbjct: 549 MIGGLCK-KGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRC 607
Query: 180 GYLPESSTFDYTVTCLVTG 198
G+ ++ST + L G
Sbjct: 608 GFSVDASTIKMVIDMLSDG 626
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 235/491 (47%), Gaps = 8/491 (1%)
Query: 6 ISPST--RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+SP+T LY A I A ++ + A F++M + C P YN ++ + D+
Sbjct: 47 LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 106
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ +M G +P+++T+TI + FC R R+L + R ++V
Sbjct: 107 AHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVC 162
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G++ H A +L + + N +L+ L EA +L K+ RG
Sbjct: 163 GLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSI 222
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + L L E ++D V P TY L+ L K E YL
Sbjct: 223 NLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYL 281
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + +YN +ID +CK++M+ ATE+ ++ + P+ VT+ +LI+G C +
Sbjct: 282 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 341
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V + EL G KPD +NS++ LC AL ++EM E G P+ TY
Sbjct: 342 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 401
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI+I LC +G+++ + + PD++TFN LI +C+ K++ A + M
Sbjct: 402 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 461
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ PD +Y++++ L K+G+ +E +TF M GC+P+ T N+++E + + EE
Sbjct: 462 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 521
Query: 484 AHD-IVKTSKE 493
A IVK S+E
Sbjct: 522 ASKVIVKMSQE 532
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 231/499 (46%), Gaps = 36/499 (7%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F QM P+ +N ++H +C+ G V EA L+ ++ G + N++TY I I G C
Sbjct: 177 FDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCE 236
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
A R+ E R+++ M+ V P+ T +L+ G+ + P +A L R M + L
Sbjct: 237 AGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 295
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
NT++ SM EA +L+ +G++P+ T+ + L D+ + +
Sbjct: 296 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 355
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+G+KP Y L++ L G + + +N + ++ ++ +YN+VI+ CK+ +
Sbjct: 356 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNIS 415
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
AT + + + P++ TFNTLI G+CK ++ +L+ + E G PD T+NS++
Sbjct: 416 DATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVL 475
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
+ LC+A + + + EM+ G PN ITYNILI + C + + ++ KM + +
Sbjct: 476 NGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLH 535
Query: 393 PDIYTFNALIQSFCRMNKIEK-----------------------------------AEKA 417
PD +FN LI FCR +E AEK
Sbjct: 536 PDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKI 595
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F ML+ G R D+++Y LI K+ D A + M + G P T ++ +L
Sbjct: 596 FDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTV 655
Query: 478 QGRFEEAHDIVKTSKERGI 496
R +A I+ + G+
Sbjct: 656 NHRVFQAVGIIHIMVKIGV 674
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 194/427 (45%), Gaps = 10/427 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN +I L K + A ++M C PD FTYN +I G C+I +V EA L
Sbjct: 256 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 315
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV-F 126
+K G+ P+ TY LI+G C V + + + + P+ SLV G+
Sbjct: 316 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 375
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ L H A +++ E N ++ L S+A ++ +GYLP+
Sbjct: 376 QGLILH-ALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVF 434
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
TF+ + L L+ +++ + G+ P TY ++ L KAG+ E +N
Sbjct: 435 TFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNE----VNET 490
Query: 247 FKDRLVS----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
F++ ++ N +YN++I+ FC+ N M+ A+++ +M + P+ V+FNTLI G C+
Sbjct: 491 FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCR 550
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ ++ L L E G+ TFN++I A EM+ G ++ T
Sbjct: 551 NGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYT 610
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y +LI C +V R+ +M P + TF +I S +++ +A M+
Sbjct: 611 YRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMV 670
Query: 423 TLGLRPD 429
+G+ P+
Sbjct: 671 KIGVVPE 677
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/505 (22%), Positives = 228/505 (45%), Gaps = 18/505 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+S + YN I L ++ + A M PD TYN LI G+C+ + EA
Sbjct: 219 GMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRA-YAVPDVVTYNTLIRGLCKKSMPQEA 277
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +++M G P+ +TY +IDG+C V E +L+ + P++ T SL++G
Sbjct: 278 MHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLING 337
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D +A EL + +V N+L+ L + A ++ +M + G P+
Sbjct: 338 LCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPD 397
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L ++++ +++ I +G P T+ L++ K + + +
Sbjct: 398 IQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVE 457
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+++ + + +YN V++ CK ++ E +EM + PN +T+N LI C+
Sbjct: 458 RMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSN 517
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + +++V + + G PD +FN++I CR E A ++ E G T+N
Sbjct: 518 KMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFN 577
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI + ++ + ++F +M + D YT+ LI C+ +++A M+
Sbjct: 578 TLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKK 637
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS------------NLIL 472
G P ++ +I +L + R +A M + G P+ + +++
Sbjct: 638 GFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNADKKEIAAPKILV 697
Query: 473 ETLVQQGR-----FEEAHDIVKTSK 492
E L+++G +E H+ V+ +K
Sbjct: 698 EDLMKKGHISYPTYEVLHEGVRDNK 722
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 159/360 (44%), Gaps = 2/360 (0%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G P Y ++I+ L ++ A F + KPD YN L+ G+C G++
Sbjct: 321 FKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLIL 380
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
AL+++ +M G P++ TY I+I+G C +++ V+ + P+ T +L+
Sbjct: 381 HALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 440
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G + L A +L+ R E + N++L L +E ++M +G
Sbjct: 441 DGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCH 500
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T++ + + E ++ + G+ P ++ L+ + G D+EG
Sbjct: 501 PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNG-DLEGAYL 559
Query: 243 LNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L +++ S +++N +I F M A +I EM + + T+ LI G C
Sbjct: 560 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC 619
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K A V + LV +++ GF P TF +I+ L HR A+ + MV+ GV P +
Sbjct: 620 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 679
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 247/489 (50%), Gaps = 2/489 (0%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N ++ +LVK N A +QM + Q +PD FT+NILI+ C +G ++ A ++ ++
Sbjct: 67 FNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIF 126
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
LG+ P+ T T LI G C +V E + + + ++ + +L++G+ + +
Sbjct: 127 KLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETR 186
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A ++L + ++ NT++ L + + A+ + +M + P+ T+ +
Sbjct: 187 AALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLI 246
Query: 193 -TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
CL+ G L E G+ + + + +KP T+ +L++ L K G + L + K +
Sbjct: 247 YGCLIVG-RLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGV 305
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
SN+ +YN ++D + V ++AT + M R + P++ +++ +I+G CK V +
Sbjct: 306 DSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVN 365
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
L + P+ T+NS+ID L + R DA D ++EM G P + ITY+ L+ +LC
Sbjct: 366 LFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALC 425
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
V +++ L K++ I P+IYT+ L+ C+ +++ A+ + +L G D
Sbjct: 426 KNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVK 485
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
Y+ ++ L K G FDEA ME NGC PD+ T ++ L + + ++A +++
Sbjct: 486 MYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREM 545
Query: 492 KERGISFKS 500
+G + S
Sbjct: 546 IVQGSAVGS 554
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 185/397 (46%), Gaps = 37/397 (9%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I L + P+ +YN +ID+L K + A +M V + PD TY LI+G +G
Sbjct: 195 IDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGR 254
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ EA+ L QM P+VYT+ IL+DG C + + VL +M ++ V N T S
Sbjct: 255 LKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNS 314
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G F +++E ++A + M RG
Sbjct: 315 LMDGYF--------------LVKQE---------------------NKATFVFNTMARRG 339
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ ++ + L ++E + + + P TY L++ L K GR +
Sbjct: 340 VTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAW 399
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+N + ++V +Y+ ++D CK + +D+A + +++D+ I PN+ T+ L+ G
Sbjct: 400 DLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGL 459
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ + + + LL G+ D +N M++ LC+ F++AL +S+M + G P+
Sbjct: 460 CKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDA 519
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKM--QADRISPDI 395
+TY L+R+L ++++L ++M Q + +I
Sbjct: 520 VTYETLVRALFENDKNDKAVKLLREMIVQGSAVGSNI 556
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 159/352 (45%)
Query: 144 REPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
R P+ N +L L + A + ++M + P+ TF+ + C LN
Sbjct: 58 RNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNF 117
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
+L K G P T L++ L G+ E + + V + SY +I+
Sbjct: 118 AFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLIN 177
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
CK A ++ R++ + PN+V +NT+I CKD V +L ++ P
Sbjct: 178 GLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFP 237
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D T+ ++I R ++A+ ++M+ + P+ T+NIL+ LC G++ ++ +
Sbjct: 238 DVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVL 297
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
M + +I T+N+L+ + + + KA F +M G+ PD SYS +I L K+
Sbjct: 298 AVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKT 357
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
DEA F M P++ T N +++ L++ GR +A D+V RG
Sbjct: 358 KMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRG 409
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 123/255 (48%), Gaps = 1/255 (0%)
Query: 243 LNHVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
NH+ R V + +N ++ K+N A ++M + I P+L TFN LI+ C
Sbjct: 51 FNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFC 110
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
++ +L + + GF PD T ++I LC + +AL +++ G + +
Sbjct: 111 HLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQV 170
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
+Y LI LC G+ +L++ +K+ + P++ +N +I S C+ + A M
Sbjct: 171 SYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEM 230
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ + PD +Y+ LI + GR EA F M PD YT N++++ L ++G
Sbjct: 231 IVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEM 290
Query: 482 EEAHDIVKTSKERGI 496
++A +++ ++G+
Sbjct: 291 KKARNVLAVMIKQGV 305
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 245/499 (49%), Gaps = 8/499 (1%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P +N ++ +L K A +QM V + + T NILI+ C +G + +
Sbjct: 7 TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++ ++ LGY P+ T L+ G C V + + + + + + +L++G+
Sbjct: 67 VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + A +LL +R ++ NT++ L + + +EA + +M RG P++
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186
Query: 187 TFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
T+ T L+ G L +LD I + + P Y +L+ AL K G E
Sbjct: 187 TY----TTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNL 242
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + K+ + V +Y+ ++D +C V + A +I M + PN+ ++N +I+G CK
Sbjct: 243 LAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCK 302
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
V + LL +L PD T+NS+ID LC++ R AL+ ++EM G P + +T
Sbjct: 303 CKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVT 362
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y L+ +LC ++ ++ LF KM+ I P +YT+ ALI C+ +++ A++ F +L
Sbjct: 363 YTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL 422
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G D ++Y+ +I L K G FDEA ME NGC P++ T +I+ +L ++ +
Sbjct: 423 VKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDEND 482
Query: 483 EAHDIVKTSKERGISFKSF 501
+A ++ +G+ F
Sbjct: 483 KAEKLLHEMIAKGLLVLDF 501
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 139/317 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P Y +I + A+ +M + P + YNILI+ +C+ G V EA
Sbjct: 180 GIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEA 239
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G P V TY+ L+DG+C V ++ M + V PN + +++G
Sbjct: 240 KNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMING 299
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +C +A LL + + + + N+L+ L + + A ++ +M RG +
Sbjct: 300 LCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPAD 359
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L +L++ + +RG++P TY L++ L K GR
Sbjct: 360 VVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQ 419
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
H+ +V +Y ++I CK M D A I +M D PN VTF +I +
Sbjct: 420 HLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKD 479
Query: 305 EVHKTRELLVMLLECGF 321
E K +LL ++ G
Sbjct: 480 ENDKAEKLLHEMIAKGL 496
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G++P+ YN +I+ L K +D A ++M PD TYN LI G+C+ G +
Sbjct: 284 MGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITS 343
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L+ +M G +V TYT L+D C + + + + MKER + P T +L+
Sbjct: 344 ALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALID 403
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + A EL + + ++ L M EA AI KM D G +P
Sbjct: 404 GLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIP 463
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
+ TF+ + L + ++ +L I +G+
Sbjct: 464 NAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 119/278 (42%), Gaps = 6/278 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P Y+ ++D + A F M P+ ++YNI+I+G+C+ VDEA
Sbjct: 250 GIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEA 309
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+++M P+ TY LIDG C + R+ ++ M R + T SL+
Sbjct: 310 MNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDA 369
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + KA L ++ ER L+ L A + + + +G +
Sbjct: 370 LCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCID 429
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ ++ L +E I G P T+ +++ +L++ + + ++ L+
Sbjct: 430 VWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLH 489
Query: 245 H-VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+ K LV + V D F + N D+A ++ EM
Sbjct: 490 EMIAKGLLVLDFK----VADVFVQ-NENDKAEKLLHEM 522
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 244/488 (50%), Gaps = 16/488 (3%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
RLY D+L+ + ++ A+ V +C ++ IG ++EA+ +V
Sbjct: 729 RLYLVTADSLLANGNLQKAH------EVMRC---------MLRNFSEIGRLNEAVGMVMD 773
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M+ G P+ T +++ + V + M R V P+ ++ + +V G FR
Sbjct: 774 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 833
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A L ++R + C +L L N + + A RKM D G+ P F
Sbjct: 834 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 893
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR-YLNHVFKD 249
+ L + + +L+ ++ G KP T+ L++ L K G + R +L V D
Sbjct: 894 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 953
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
NV++Y +I +CK + ++RA + M+++ + PN+ T+ TLI+GHCK +
Sbjct: 954 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 1013
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
EL+ ++ + GF P+ +T+N+ ID LC+ R +A + L++ G+ + +TY ILI+
Sbjct: 1014 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 1073
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
C D+ ++L F +M D+ N LI +FCR K++++E+ F +++LGL P
Sbjct: 1074 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 1133
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y+++I K G D A + F +M+++GC PDS+T ++ L ++ +EA + +
Sbjct: 1134 KETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 1193
Query: 490 TSKERGIS 497
+RG+S
Sbjct: 1194 AMIDRGLS 1201
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 186/459 (40%), Gaps = 69/459 (15%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHG---------- 54
G++PS+ N V++ V+ I+ A F +MSV PD +Y +++ G
Sbjct: 778 GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 837
Query: 55 -------------------------ICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDG 89
+C G+V+ A+ ++M LG+ PN+ +T LIDG
Sbjct: 838 DRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDG 897
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C + + F +LE M PN T +L+ G+ + KAF L ++ + +
Sbjct: 898 LCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDT--- 954
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
Y P T+ + LN +
Sbjct: 955 -------------------------------YKPNVHTYTSMIGGYCKEDKLNRAEMLFS 983
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
++G+ P +TY L+ KAG +N + + + N+ +YN ID CK +
Sbjct: 984 RMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKS 1043
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
A E+ + + + VT+ LI CK ++++ + + GF+ D N
Sbjct: 1044 RAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNN 1103
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+I CR + +++ +V G+ P TY +I C GD+ +L+ F M+
Sbjct: 1104 ILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRH 1163
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
PD +T+ +LI C+ + +++A K + +M+ GL P
Sbjct: 1164 GCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 1202
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 181/402 (45%), Gaps = 13/402 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P+ + ++ID L K SI A+ ++M + KP+ +T+ LI G+C+ G ++
Sbjct: 882 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 941
Query: 64 ALRL-VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A RL +K + Y PNV+TYT +I G+C ++ + MKE+ + PN T +L+
Sbjct: 942 AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 1001
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G + +A+EL+ + + N + L S A EA +L K G
Sbjct: 1002 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 1061
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+ T+ + D+N+ K G + +L+ A + + E +R
Sbjct: 1062 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 1121
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
V L+ +Y +I C+CK +D A + M+ P+ T+ +LISG CK
Sbjct: 1122 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCK 1181
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE--WGVPPNT 360
+ V + +L +++ G P + T ++ C+ + +A+ L + + W
Sbjct: 1182 KSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLW-----I 1236
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKM-----QADRISPDIYT 397
T L+R LC+ V + FQK+ ADR++ +T
Sbjct: 1237 RTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFT 1278
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 222/491 (45%), Gaps = 35/491 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP + +ID +DLA+ F +M +PD T+N LI+G+C++G +A
Sbjct: 125 GLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQA 184
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ E G P VYTYT +I+G C + + M+E PN T L+
Sbjct: 185 VEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDS 244
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + ++A ++ + N+L+ L N EA+A+L +M +P
Sbjct: 245 LCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPN 304
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ V + ++E G+ T + GV+P TY LM
Sbjct: 305 IFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLM---------------YG 349
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +V ++ +I CK P+ ++N LI G+CK
Sbjct: 350 YSLRMEIVEARKLFDAMITKGCK--------------------PDAFSYNILIKGYCKAK 389
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + ++L ++ G PD +N++I LC+ R +A D M G P+ TY+
Sbjct: 390 RIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYS 449
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+L+ C G + ++ RLF+ MQ+ + PDI +N LI + C+ ++ A K F +
Sbjct: 450 MLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQ 509
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL P+ Y+ +I L K G DEA + F +ME +GC PD ++ N+I+ +Q A
Sbjct: 510 GLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRA 569
Query: 485 HDIVKTSKERG 495
++ ++RG
Sbjct: 570 AQLIGEMRDRG 580
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 209/465 (44%), Gaps = 35/465 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P +N +I+ L K A F C+P +TY +I+G+C+IG
Sbjct: 159 LGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTA 218
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L K+ME G PNV TY ILID C K V E + MK + + P+ T SL+
Sbjct: 219 AAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQ 278
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G +CN ++ EA+A+L +M +P
Sbjct: 279 G---------------------------LCNFRRWK--------EASALLNEMTSLNIMP 303
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
TF+ V + ++E G+ T + GV+P TY LM VE +
Sbjct: 304 NIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLF 363
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + SYN++I +CK +D A ++ EM + + P+ V +NTLI G C+
Sbjct: 364 DAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQL 423
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + ++L + G PD FT++ ++D C+ A M + P+ Y
Sbjct: 424 GRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMY 483
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NILI ++C G++ + +LF ++ + P++ + +I + C+ +++A +AF +M
Sbjct: 484 NILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEG 543
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
G PD FSY+ +I+ ++ A Q M G ++ T+
Sbjct: 544 DGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTT 588
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 179/373 (47%), Gaps = 7/373 (1%)
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAIL---RKMGDRGYL 182
FR +D A + REPL + LL + M A++ ++M G
Sbjct: 72 FRNID--DALASFNHMLHREPLPCIIQFTKLLSAIV--KMGQYYGAVISLSKQMELAGLS 127
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ T + C ++ + IK G++P T+ L+ L K G+ + +
Sbjct: 128 PDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEF 187
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ V +Y +I+ CK+ A + ++M + PN+VT+N LI CK
Sbjct: 188 FDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCK 247
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
D V++ ++ + PD FT+NS+I LC R+++A L+EM + PN T
Sbjct: 248 DKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFT 307
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+N+L+ ++C G V+ + +F+ M + PD+ T+++L+ + +I +A K F +M+
Sbjct: 308 FNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMI 367
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
T G +PD FSY+ LIK K+ R DEAKQ F M G PD+ N ++ L Q GR
Sbjct: 368 TKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLR 427
Query: 483 EAHDIVKTSKERG 495
EA D+ K G
Sbjct: 428 EAQDLFKNMHSNG 440
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ ++Y +I+ L K +D A F+ M D C PD F+YN++I G + A
Sbjct: 510 GLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRA 569
Query: 65 LRLVKQMEGLGYAPNVYTYT 84
+L+ +M G+ T T
Sbjct: 570 AQLIGEMRDRGFVAEAGTTT 589
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 233/487 (47%), Gaps = 38/487 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G + ++ ++ L + + A F+ M+ D C PD TY L+H +C+ G DEA
Sbjct: 87 GFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVMTYTALVHALCKAGKFDEA 145
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++++M G AP+ T++ LIDG C + FRVLE + +R + ++A
Sbjct: 146 QGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDA-------- 197
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE-AAAILRKMGDRGYLP 183
AFE T++ RL N + E A+ +L + +G+ P
Sbjct: 198 ---------AFE------------------TIIQRLCNKYNSVELASKVLGVVIAKGFTP 230
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
F+ + DL+ +L+ I++G P T+ +L+ L KA R E + L
Sbjct: 231 TVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLL 290
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ NV +Y+ VI+ CK +D A E+ + M R+ PN+VT N LI G CK
Sbjct: 291 EKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKA 350
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV-PPNTIT 362
+ + R+L + E G PD T+NS+ID LC++ + ++A + E GV N +T
Sbjct: 351 KRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVT 410
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y+ L A+G +A + R+F + SPD+ T+ +LI +C+ ++ + + M
Sbjct: 411 YSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMA 470
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ G P + SA++ L + + A Q F SM GC D+ NL++E + + + +
Sbjct: 471 SKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHD 530
Query: 483 EAHDIVK 489
+A +++
Sbjct: 531 KALAVLE 537
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 221/474 (46%), Gaps = 10/474 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P+ ++N VI+ K+ +D AY + M C P+ FT+ ILI G+C+ V EA
Sbjct: 227 GFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEA 286
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L+++M G +PNV TY+ +I+G C +V + + + ++M+ RN PN T L+ G
Sbjct: 287 QQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDG 346
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A +L R E + N+L+ L + EA + + + + G
Sbjct: 347 LCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGV--- 403
Query: 185 SSTFDYTVTCLVTGLD----LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
S+ T + L G + + C I + +G P +TY L+ K R VE
Sbjct: 404 SAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVV 463
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + VN+ + V+ + N +RA ++ M R + + +N ++ G
Sbjct: 464 ELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGM 523
Query: 301 CKDAEVHKTRELLVMLLEC---GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
+ ++ K +L +++ F P +++++ LC+ + +DA L +M E G
Sbjct: 524 ARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFA 583
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
+YN L+ L + + ++F+ M + +P+I T N +I C K++ A +
Sbjct: 584 AAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYEL 643
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
M LG PD + + LI KSGR D A++ M + G P+ T +L+
Sbjct: 644 VQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 210/434 (48%), Gaps = 10/434 (2%)
Query: 46 FTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEI 105
F+ N + +CR+ EAL L + PN +TY ILI GF +A + ++LE
Sbjct: 23 FSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEE 82
Query: 106 MKERNVCPNEATVRSLVHGVFRCLDPHKAFELL--IRFMEREPLTQKLVCNTLLYRLSNN 163
MK N +L+ G+ D + E L R M ++ + L++ L
Sbjct: 83 MKSSGFEGNAVVHTTLMKGL---CDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALCKA 139
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
EA +LR+M +G P++ TF + L + +L+ I+RG+ + +
Sbjct: 140 GKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAF 199
Query: 224 LLLMEALYKAGRDVE-GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
+++ L VE + L V V +N+VI+ FCK +D A ++ M
Sbjct: 200 ETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMI 259
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
++ PN+ TF LI+G CK V + ++LL ++ G P+ T++++I+ LC+ + +
Sbjct: 260 EKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVD 319
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
DA + M PPN +T+NILI LC + + +L+ +M+ +PDI T+N+LI
Sbjct: 320 DAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLI 379
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDN-FSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
C+ ++++A + F ++ G+ N +YS L GR +A + F + G
Sbjct: 380 DGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGF 439
Query: 462 NPD--SYTSNLILE 473
+PD +YTS LILE
Sbjct: 440 SPDLATYTS-LILE 452
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 227/498 (45%), Gaps = 7/498 (1%)
Query: 5 GISPSTRLYNAVIDALV-KSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G+ S + +I L K NS++LA + P +N++I+G C+ +D
Sbjct: 191 GMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDS 250
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +L++ M G PNV+T+TILI G C A RV E ++LE M PN T ++++
Sbjct: 251 AYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVIN 310
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + A+EL + MER +V N L+ L EA + +M + G
Sbjct: 311 GLCKQGQVDDAYELF-QLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCA 369
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS-TYLLLMEALYKAGRDVEGDR 241
P+ T++ + L ++E + T + GV + TY L GR + R
Sbjct: 370 PDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACR 429
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + ++ +Y +I +CK + E+ EM + P + T + ++ G
Sbjct: 430 IFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLF 489
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE---WGVPP 358
+ + +L + G D +N +++ + RA + + AL L ++++ P
Sbjct: 490 EGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNP 549
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
++ + L+ SLC +G + +L KM + + ++N L+ R+ + ++A + F
Sbjct: 550 SSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVF 609
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+M++ G P+ + + +I L + + D+A + M + GC PD T N ++ +
Sbjct: 610 EAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKS 669
Query: 479 GRFEEAHDIVKTSKERGI 496
GR + A +++ E G+
Sbjct: 670 GRADLARKLLEEMTEAGL 687
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/530 (23%), Positives = 231/530 (43%), Gaps = 42/530 (7%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P Y A++ AL K+ D A ++M C PD T++ LI G+C+ G ++A R
Sbjct: 123 APDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFR 182
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF-RVLEIMKERNVCPNEATVRSLVHGV 125
+++ + G + + +I CN E+ +VL ++ + P +++G
Sbjct: 183 VLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGF 242
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ D A++LL +E+ + L+ L + EA +L KM G P
Sbjct: 243 CKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNV 302
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + L +++ + +R P T+ +L++ L KA R +E R L H
Sbjct: 303 VTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR-IEEARQLYH 361
Query: 246 VFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI-APNLVTFNTLISGHCKD 303
++ ++ +YN +ID CK +D A ++ + + + + A N VT++TL G+
Sbjct: 362 RMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAAL 421
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + ML++ GF PD T+ S+I C+ R + ++ + EM G PP T
Sbjct: 422 GRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTL 481
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN------------------------ 399
+ ++ L R+++LF M A + D +N
Sbjct: 482 SAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVID 541
Query: 400 --------------ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
AL++S C++ K + A++ M G SY+ L+ L + R
Sbjct: 542 KRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQR 601
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+DEA Q F +M G P+ T N+++ L + ++A+++V+ + G
Sbjct: 602 WDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLG 651
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 130/317 (41%), Gaps = 70/317 (22%)
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ R+ NV S N +D C++N A + R R PN T+ LI G ++
Sbjct: 15 RSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLD 74
Query: 308 KTRELLVMLLECGFK----------------------------------PDKFTFNSMID 333
+LL + GF+ PD T+ +++
Sbjct: 75 IAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVH 134
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK-------- 385
LC+A +F++A L EMV G P+T+T++ LI LC G ++ R+ +
Sbjct: 135 ALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGN 194
Query: 386 ----------------------------MQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
+ A +P + FN +I FC+ ++ A K
Sbjct: 195 SDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKL 254
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
M+ G P+ F+++ LI L K+ R EA+Q M GC+P+ T + ++ L +
Sbjct: 255 LEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCK 314
Query: 478 QGRFEEAHDIVKTSKER 494
QG+ ++A+++ + + R
Sbjct: 315 QGQVDDAYELFQLMERR 331
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%)
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
LF R+ ++++ N + CR+N+ ++A F + + P+ F+Y LI+
Sbjct: 9 LFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFS 68
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+G D A Q M+ +G ++ +++ L GR EA
Sbjct: 69 SAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEA 111
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 227/493 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP Y A+++ L K + + A +MS KP+ Y L+ G + G EA
Sbjct: 308 GLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEA 367
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++K+M G PN Y LI G C ++ ++L+ M + + P+ T L+ G
Sbjct: 368 FDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQG 427
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ D AFELL L ++ L N + EA +L +M G P
Sbjct: 428 HFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPN 487
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + +++ C L+ K V P Y L++ L GR E + Y
Sbjct: 488 AFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYA 547
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
V K LV + +Y+ +I +CK +++A ++ R+M + + PN T+ L+ G+ K
Sbjct: 548 QVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSN 607
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ K +L +L G KPD + +I L R+ E A L+E+ + G+ P+ Y+
Sbjct: 608 DYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYS 667
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI LC I D+ +++ L +M + + P I +NALI FCR I +A F S+L
Sbjct: 668 SLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAK 727
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL P+ +Y+ALI K+G +A + M G PD++ N++ E+A
Sbjct: 728 GLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQA 787
Query: 485 HDIVKTSKERGIS 497
+ + RG +
Sbjct: 788 LFLTEEMFNRGYA 800
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 217/484 (44%), Gaps = 35/484 (7%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SPST + + ++D K+ S+ A M+ P R N L+ + R ++ +
Sbjct: 170 SPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWK 229
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L MEG G P+VYTY+ I+ C A+ +V E M+ R+ NE T ++ G+
Sbjct: 230 LKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLC 289
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
R + EA +M D G P++
Sbjct: 290 R-----------------------------------SGAVEEAFGFKEEMVDYGLSPDAF 314
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L G L E +LD G+KP Y L++ K G+ E L +
Sbjct: 315 TYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEM 374
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ N Y+ +I CK+ + RA+++ +EM + P+ T+N L+ GH + +
Sbjct: 375 ISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDK 434
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
ELL + G P+ +++ MI+ LC+ ++A + L EM+ G+ PN Y L
Sbjct: 435 DGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPL 494
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I G+++ + +KM + PD++ +N+LI+ + ++E+AE+ + + GL
Sbjct: 495 IIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGL 554
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
PD F+YS LI K+G ++A Q M +G P++ T +LE + +E+
Sbjct: 555 VPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSS 614
Query: 487 IVKT 490
I+++
Sbjct: 615 ILQS 618
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 214/455 (47%), Gaps = 1/455 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P T YN ++ + + D A+ +M P+ ++Y I+I+G+C+ G E
Sbjct: 412 VGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKE 471
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+++M G PN + Y LI G ++ LE M + NV P+ SL+
Sbjct: 472 AGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIK 531
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ +A E + +R + + + L++ +A +LR+M + G P
Sbjct: 532 GLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKP 591
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ + D + IL + + G KP Y +++ L ++ L
Sbjct: 592 NADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVL 651
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
V K+ LV +++ Y+ +I CK+ M++A + EM + P +V +N LI G C+
Sbjct: 652 TEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRS 711
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + R + +L G P+ T+ ++ID C+ DA D EM++ G+ P+ Y
Sbjct: 712 GDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVY 771
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+L D+ ++L L ++M +R ++ FN L+ FC+ K+++ EK M+
Sbjct: 772 NVLATGCSDAADLEQALFLTEEM-FNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMD 830
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+ P+ + ++ K+G+ EA + F ++Q
Sbjct: 831 REIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQ 865
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 194/424 (45%), Gaps = 8/424 (1%)
Query: 77 APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFE 136
+P+ +L+D + V +V+ +M + + P R +G+ + L A E
Sbjct: 170 SPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAP----TRRCCNGLLKDLLRADAME 225
Query: 137 LLIR---FMEREPLTQKLVCNTLLYRLSNNSMASEAAA-ILRKMGDRGYLPESSTFDYTV 192
LL + FME + + + + +AA + +M R T++ +
Sbjct: 226 LLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMI 285
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+ L + E G + + G+ P TY LM L K R E L+ + L
Sbjct: 286 SGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLK 345
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
N+ Y ++D F K A +I +EM + PN + ++ LI G CK ++ + +L
Sbjct: 346 PNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKL 405
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L +++ G +PD FT+N ++ + H + A + L+EM G+ PN +Y I+I LC
Sbjct: 406 LKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQ 465
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G+ + L ++M ++ + P+ + + LI + I A +A M + PD F
Sbjct: 466 NGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFC 525
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y++LIK L GR +EA++ + +++ G PD +T + ++ + G E+A +++
Sbjct: 526 YNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQML 585
Query: 493 ERGI 496
G+
Sbjct: 586 NSGL 589
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 175/388 (45%), Gaps = 1/388 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ +Y +I K +I LA ++M+ PD F YN LI G+ +G ++EA
Sbjct: 483 GLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEA 542
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
Q++ G P+ +TY+ LI G+C + + ++L M + PN T L+ G
Sbjct: 543 EEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEG 602
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ D K +L + + ++ LS + A +L ++ G +P+
Sbjct: 603 YFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPD 662
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ L D+ + G+LD K G++P Y L++ ++G +
Sbjct: 663 LHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFD 722
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ LV N +Y +ID CK + A ++ +EM DR IAP+ +N L +G A
Sbjct: 723 SILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAA 782
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + L + G+ + FN+++ C+ + ++ L M++ + PN T
Sbjct: 783 DLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVE 841
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRIS 392
++ G + + R+F ++Q + S
Sbjct: 842 KVVSEFGKAGKLGEAHRVFAELQQKKAS 869
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 139/275 (50%), Gaps = 9/275 (3%)
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
ME L+K +EG L V+ +Y+ I+ CK D A ++ EMR RD
Sbjct: 224 MELLWKLKGFMEGAGILPDVY---------TYSTFIEAHCKARDFDAAKKVFEEMRRRDC 274
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
A N VT+N +ISG C+ V + +++ G PD FT+ ++++ LC+ R ++A
Sbjct: 275 AMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKA 334
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L EM G+ PN + Y L+ G A + + ++M + + P+ ++ LI+ C
Sbjct: 335 LLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLC 394
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
++ ++ +A K M+ +GLRPD F+Y+ L++ + D A + M +G P+ Y
Sbjct: 395 KIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVY 454
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ +++ L Q G +EA ++++ G+ +F
Sbjct: 455 SYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAF 489
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%)
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P+T ++L+ + G V + ++ M ++P N L++ R + +E K
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKL 230
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
M G+ PD ++YS I+A K+ FD AK+ F M + C + T N+++ L +
Sbjct: 231 KGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 290
Query: 478 QGRFEEAHDIVKTSKERGISFKSF 501
G EEA + + G+S +F
Sbjct: 291 SGAVEEAFGFKEEMVDYGLSPDAF 314
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/494 (26%), Positives = 228/494 (46%), Gaps = 35/494 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G+ P+ N +I++ N + A+ ++ +PD T+ LI G+C G + E
Sbjct: 85 FGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGE 144
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L +M G+ PNV TY LI+G C + R+L M++ N P+ S++
Sbjct: 145 ALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID 204
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +AF L + + + +L++ L N +L +M + LP
Sbjct: 205 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 264
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ F V L + E I+D I+RGV+P
Sbjct: 265 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP------------------------- 299
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+V +Y ++D C + MD A ++ M + AP+++++ TLI+G+CK
Sbjct: 300 ----------DVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKI 349
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ K L + + PD T+N+++ LC R +DA+ EMV G P+ +TY
Sbjct: 350 HKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTY 409
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+IL+ SLC + ++ L + ++A ++PDI +N +I CR ++E A F ++ +
Sbjct: 410 SILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 469
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL P ++Y+ +I L K G +EA + F+ M+ N C+PD T N I +Q
Sbjct: 470 KGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLR 529
Query: 484 AHDIVKTSKERGIS 497
A +++ RG S
Sbjct: 530 AIQLLEEMLARGFS 543
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 210/476 (44%), Gaps = 35/476 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P + +I L I A F +M + +P+ TY LI+G+C++G
Sbjct: 120 LGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSA 179
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+RL++ ME P+V YT +ID C ++V E F + M + + P+ T SLVH
Sbjct: 180 AIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVH 239
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+CN ++ +L +M + LP
Sbjct: 240 A---------------------------LCNLCEWK--------HVTTLLNQMVNSKILP 264
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ F V L + E I+D I+RGV+P TY LM+ E +
Sbjct: 265 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF 324
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + +V SY +I+ +CK++ +D+A + EM ++ P+ T+NTL+ G C
Sbjct: 325 DMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHV 384
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ L ++ G PD T++ ++D LC+ E+A+ L + + P+ Y
Sbjct: 385 GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVY 444
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI+I +C G++ + LF + + + P ++T+N +I C+ + +A K F M
Sbjct: 445 NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDG 504
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
PD +Y+ + + +++ A Q M G + D T+ L++E L G
Sbjct: 505 NDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 35/263 (13%)
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
N +D A + P++V F L++ K L + G P+ +T
Sbjct: 35 NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTL 94
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N +I+ C +R A L+++++ G P+ T+ LIR LC G + +L LF KM
Sbjct: 95 NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 154
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ P++ T+ LI C++ A + SM +PD Y+++I +L K + E
Sbjct: 155 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTE 214
Query: 449 AKQTFLSMEQNGCNPD--SYTS---------------------------------NLILE 473
A F M G +PD +YTS + +++
Sbjct: 215 AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVD 274
Query: 474 TLVQQGRFEEAHDIVKTSKERGI 496
L ++G+ EAH+IV +RG+
Sbjct: 275 ALCKEGKVTEAHEIVDMMIQRGV 297
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ PS YN +I L K ++ A F +M + C PD TYN + G +
Sbjct: 467 LSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNE 526
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID 88
A++L+++M G++ +V T T+L++
Sbjct: 527 TLRAIQLLEEMLARGFSADVSTTTLLVE 554
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 233/474 (49%), Gaps = 8/474 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + + + K QM + + ++ N+LI+ +CR+ VD A+ +
Sbjct: 86 PSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSI 145
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LG P T+ LI+G CN ++ E + M R PN + ++++G+ +
Sbjct: 146 LGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCK 205
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ A ++ + + + NT++ L + + ++A L +M DRG P
Sbjct: 206 TGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNV-- 263
Query: 188 FDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+T C+V G LNE + + R V P T +L++ L K G E
Sbjct: 264 --FTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVF 321
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + N+++YN ++D +C +M+ A ++ M + AP + ++N LI+G CK
Sbjct: 322 ETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKS 381
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + + LL + PD T+++++ LC+ R ++AL+ EM +G+ PN +TY
Sbjct: 382 RRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTY 441
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+IL+ C G + +L+L + MQ ++ P+I LI+ K+E A++ F +
Sbjct: 442 SILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFA 501
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
G+RP +Y+ +IK L+K G DEA F ME +G P+S + N++++ +Q
Sbjct: 502 DGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQ 555
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 197/404 (48%), Gaps = 12/404 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN +I+ L K+ + +A F++M + CKPD TYN +I +C+ +V++A
Sbjct: 188 GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDA 247
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + +M G PNV+TY ++ GFC ++ E R+ + M R+V P+ T+ LV G
Sbjct: 248 MEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDG 307
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLV------CNTLLYRLSNNSMASEAAAILRKMGD 178
+ C + + L+ E +T+K V N L+ + +EA + M
Sbjct: 308 L--CKEGMVSEARLVF----ETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIR 361
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+G P +++ + ++E +L + + P TY LM+ L + GR E
Sbjct: 362 QGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKE 421
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ L+ N+ +Y++++D FCK +D A ++ + M+++ + PN+V LI
Sbjct: 422 ALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIE 481
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G ++ +EL L G +P T+ MI L + ++A D +M + G P
Sbjct: 482 GMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLP 541
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
N+ +YN++I+ D + ++RL +M R S ++ TF L+
Sbjct: 542 NSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 156/323 (48%)
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
S ++ +M G + + + CL ++ IL K G+ P ST+ L
Sbjct: 105 STVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNAL 164
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ L G+ E N + + NV SYN +I+ CK A ++ ++M
Sbjct: 165 INGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGC 224
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P++VT+NT+I CKD V+ E L +L+ G P+ FT+N M+ C + +A
Sbjct: 225 KPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATR 284
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
EMV V P+T+T IL+ LC G V+ + +F+ M + P+I T+NAL+ +C
Sbjct: 285 LFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYC 344
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ +A+K F M+ G P SY+ LI KS R DEAK M NPD+
Sbjct: 345 LQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTV 404
Query: 467 TSNLILETLVQQGRFEEAHDIVK 489
T + +++ L Q GR +EA +I K
Sbjct: 405 TYSTLMQGLCQFGRPKEALNIFK 427
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 124/243 (51%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+V + + F K +C +M + N+ + N LI+ C+ V +L
Sbjct: 87 SVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSIL 146
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ + G P TFN++I+ LC + ++A++ +EMV G PN I+YN +I LC
Sbjct: 147 GKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKT 206
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G+ + ++ +F+KM+ + PD+ T+N +I S C+ + A + ML G+ P+ F+Y
Sbjct: 207 GNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTY 266
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ ++ G+ +EA + F M PD+ T ++++ L ++G EA + +T E
Sbjct: 267 NCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTE 326
Query: 494 RGI 496
+G+
Sbjct: 327 KGV 329
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 148/329 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ YN ++ ++ A F++M PD T IL+ G+C+ G+V EA
Sbjct: 258 GIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEA 317
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + M G PN+ TY L+DG+C + + E +V EIM + P + L++G
Sbjct: 318 RLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILING 377
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A LL + + +TL+ L EA I ++M G LP
Sbjct: 378 FCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPN 437
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L+E +L + ++ ++P + +L+E ++ AG+ +
Sbjct: 438 LVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFS 497
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+F D + + +Y ++I K + D A ++ R+M D PN ++N +I G ++
Sbjct: 498 KLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQ 557
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMID 333
+ L+ ++ F + TF ++D
Sbjct: 558 DSSTAIRLIDEMVGKRFSANLSTFQMLLD 586
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 144/371 (38%), Gaps = 74/371 (19%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN +ID+L K ++ A +M P+ FTYN ++HG C +G ++EA
Sbjct: 223 GCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEA 282
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL K+M G P+ T TIL+DG C V+E V E M E+ V PN +T +L+ G
Sbjct: 283 TRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDG 342
Query: 125 VFRCL-----DPHKAFELLIRF-------------------------------MEREPLT 148
CL + K FE++IR M + L
Sbjct: 343 Y--CLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALN 400
Query: 149 QKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGI 207
V +TL+ L EA I ++M G LP T+ + L+E +
Sbjct: 401 PDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKL 460
Query: 208 LDTFIKR-----------------------------------GVKPRFSTYLLLMEALYK 232
L + ++ G++P TY ++++ L K
Sbjct: 461 LKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLK 520
Query: 233 AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
G E + D + N SYN++I F + A + EM + + NL T
Sbjct: 521 EGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLST 580
Query: 293 FNTLISGHCKD 303
F L+ +D
Sbjct: 581 FQMLLDLESQD 591
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 85/175 (48%)
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
+P F + + ++ + ++M +GV N + N+LI LC + V ++
Sbjct: 85 RPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVS 144
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
+ KM I P TFNALI C KI++A + F M+ G P+ SY+ +I L
Sbjct: 145 ILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLC 204
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
K+G A F MEQNGC PD T N I+++L + +A + + +RGI
Sbjct: 205 KTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGI 259
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 152/515 (29%), Positives = 244/515 (47%), Gaps = 24/515 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS YNAV+ AL + S+ A F M D P+ +TYNILI +C G EA
Sbjct: 111 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +++ M G G PNV TY L+ F A V R++ +M + + PN T S+V+G
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229
Query: 125 VFRC---LDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + D K F+ M RE L V NTL+ + EA ++ +M +G
Sbjct: 230 MCKAGKMEDARKVFD----EMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 285
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P+ TF + + +L ++ +RG++ T+ L++ K G +
Sbjct: 286 IMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 345
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + R+ +V YN +I+ +C V MD A E+ EM + + P++VT++T+IS +
Sbjct: 346 LAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 405
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ + H EL +LE G PD T++S+I LC R DA M++ G+ P+
Sbjct: 406 CKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDE 465
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
TY LI C G+V R+L L KM + PD+ T++ LI + + +A++ F
Sbjct: 466 FTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFK 525
Query: 421 MLTLGLRPDNFSYSALI----KALIKS-----------GRFDEAKQTFLSMEQNGCNPDS 465
+ P N Y AL+ KA +KS G +EA + + SM N D
Sbjct: 526 LYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDG 585
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
++++ + G +A K +RG + S
Sbjct: 586 SVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNS 620
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 167/351 (47%), Gaps = 1/351 (0%)
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
L N +L LS+ S+ S A M G P T++ + L E IL
Sbjct: 117 LAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRD 175
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
G P TY L+ A ++AG +R + + L N+ ++N +++ CK
Sbjct: 176 MRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGK 235
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
M+ A ++ EM +AP+ V++NTL+ G+CK H+ + + + G PD TF S
Sbjct: 236 MEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTS 295
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I +C+A E A+ + +M E G+ N +T+ LI C G + +L + M+ R
Sbjct: 296 LIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCR 355
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
I P + +NALI +C + ++++A + M GL+PD +YS +I A K+ A
Sbjct: 356 IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAF 415
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ M + G PD+ T + ++ L ++ R +AH + K + G+ F
Sbjct: 416 ELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEF 466
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 207/480 (43%), Gaps = 27/480 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ +N++++ + K+ ++ A F +M + PD +YN L+ G C+ G EA
Sbjct: 215 GLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEA 274
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + +M G P+V T+T LI C A + ++ M+ER + NE T +L+ G
Sbjct: 275 LSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDG 334
Query: 125 VFRCLDPHKAFE----LLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDR 179
+ K F L +R M + + +VC N L+ EA +L +M +
Sbjct: 335 FCK-----KGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAK 389
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G P+ T+ ++ D + + +++GV P TY L+ L + R +
Sbjct: 390 GLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDA 449
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
++ K L + +Y +ID CK ++RA + +M + P++VT++ LI+G
Sbjct: 450 HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLING 509
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL----------- 348
K A + ++LL L P +++++ C CR + L L
Sbjct: 510 LSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHC-CRKAELKSVLALLKGFCMKGLMNE 568
Query: 349 -----SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
M++ + Y++LI C G+V ++L ++M +P+ + +LI+
Sbjct: 569 ADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIR 628
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ +A++ +L D + ALI + G D M ++G P
Sbjct: 629 GLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 688
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 171/409 (41%), Gaps = 58/409 (14%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P + ++I + K+ +++ A +QM + + T+ LI G C+ G +D+A
Sbjct: 285 GIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDA 344
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L V+ M P+V Y LI+G+C R+ E +L M+ + + P+ T +++
Sbjct: 345 LLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISA 404
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D H AFEL + +E+ L + ++L+ L S+A + + M G P+
Sbjct: 405 YCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPD 464
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
++T T L+ G ++ + D +K GV P TY +L+ L K+ R +E
Sbjct: 465 ----EFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQ 520
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDC---------------FCKVNMMDRATEI-------- 277
+ L ++ + + Y+ ++ C FC +M+ A ++
Sbjct: 521 QLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRN 580
Query: 278 ---------------CR------------EMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
CR +M R APN + +LI G ++ V +
Sbjct: 581 WNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEAD 640
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+++ LL C D ++ID + LD L M + G+ P+
Sbjct: 641 QVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 689
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 94/235 (40%), Gaps = 25/235 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P Y ++ID K +++ A +M PD TY++LI+G+ + E
Sbjct: 459 LGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAME 518
Query: 64 ALRLVKQMEGLGYAPNVYTYT---------------ILIDGFCNAKRVAEVFRVLEIMKE 108
A +L+ ++ P Y L+ GFC + E +V + M +
Sbjct: 519 AQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLD 578
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE 168
RN + + L+HG R + KA + ++R +L+ L N M E
Sbjct: 579 RNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVE 638
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE-----TCGILDTFIKRGVKP 218
A +++++ L S D + + L+LNE +L K G+ P
Sbjct: 639 ADQVIQQL-----LNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 688
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 225/482 (46%), Gaps = 35/482 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P +NA++ +K N + ++ + +M + K +T+NI+I+ +C+ G + +A
Sbjct: 196 GVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKA 255
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ME LG PNV TY +I G+C+ RV VL+IMK R V P+ T SL+ G
Sbjct: 256 KDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISG 315
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + EA+ IL KM + G LP
Sbjct: 316 MCK-----------------------------------GGKLEEASGILEKMKEIGLLPT 340
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + DL + G D ++R + P STY LL+ AL+ G+ E D +
Sbjct: 341 AVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIK 400
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +V + +YN++I+ +C+ +A + EM + I P LVT+ +LI K
Sbjct: 401 DMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRN 460
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +L ++ G PD FN++ID C + A L EM + + P+ +TYN
Sbjct: 461 RMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYN 520
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L++ C G V + L ++M+ I PD ++N LI + + I A ML++
Sbjct: 521 TLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSI 580
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G P +Y+ALI+ L K+ + D A++ M G PD T ++E + + EA
Sbjct: 581 GFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640
Query: 485 HD 486
D
Sbjct: 641 SD 642
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 197/416 (47%), Gaps = 39/416 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ YN VI ++ A + M +PD +TY LI G+C+ G ++E
Sbjct: 265 LGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEE 324
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++++M+ +G P TY LIDG+CN + + F + M R + P +T L+H
Sbjct: 325 ASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIH 384
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+F L K+ EA +++ MGD G +P
Sbjct: 385 ALF--------------------LEGKM---------------DEADGMIKDMGDSGIVP 409
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+S T++ + + + + D I +G++P TY L+ L K R D
Sbjct: 410 DSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLF 469
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ ++ ++ +N +ID C +DRA + +EM R+I P+ VT+NTL+ G C++
Sbjct: 470 EKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCRE 529
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V + RELL + G +PD ++N++I + DA EM+ G P +TY
Sbjct: 530 GKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTY 589
Query: 364 NILIRSLC--AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
N LI+ LC GD+A L ++M + I+PD T+ +LI+ +++ +A +
Sbjct: 590 NALIQGLCKNQQGDLAE--ELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEASDS 643
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 221/491 (45%), Gaps = 35/491 (7%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+ S+ +++ +I A + D A+ F M P T+N ++ ++ +
Sbjct: 163 TKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWV 222
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L +M L VYT+ I+I+ C ++ + + M+ V PN T +++HG
Sbjct: 223 LYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGY- 281
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
C+ A +L M +RG P+S
Sbjct: 282 --------------------------CS--------RGRVEGARMVLDIMKNRGVEPDSY 307
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ ++ + G L E GIL+ + G+ P TY L++ G V+ Y + +
Sbjct: 308 TYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEM 367
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ ++ V++YN++I MD A + ++M D I P+ +T+N LI+G+C+
Sbjct: 368 VRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNA 427
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
K L ++ G +P T+ S+I L + +R + A D +++ G P+ I +N L
Sbjct: 428 KKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNAL 487
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I CA G++ R+ L ++M I PD T+N L+Q CR K+E+A + M G+
Sbjct: 488 IDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGI 547
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
RPD+ SY+ LI K G ++A M G NP T N +++ L + + + A +
Sbjct: 548 RPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEE 607
Query: 487 IVKTSKERGIS 497
++K +GI+
Sbjct: 608 LLKEMVSKGIT 618
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%)
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
RDR + + F+ LI C+ E M+ E G P TFN+M+ + ++
Sbjct: 158 RDRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQT 217
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
E +EM + T+NI+I LC G + ++ M+ + P++ T+N +
Sbjct: 218 ETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTV 277
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I +C ++E A M G+ PD+++Y +LI + K G+ +EA M++ G
Sbjct: 278 IHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGL 337
Query: 462 NPDSYTSNLILETLVQQGRFEEA 484
P + T N +++ +G +A
Sbjct: 338 LPTAVTYNTLIDGYCNKGDLVKA 360
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%)
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
++I +++LIR+ C + + F M+ + P I TFNA++ F ++N+ E +
Sbjct: 165 SSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLY 224
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M L ++ ++++ +I L K G+ +AK SME G P+ T N ++ +
Sbjct: 225 AEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSR 284
Query: 479 GRFEEAHDIVKTSKERGISFKSF 501
GR E A ++ K RG+ S+
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSY 307
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 253/527 (48%), Gaps = 39/527 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ + A+ + DL ++M ++ + + +T NI+I+ CR + A +
Sbjct: 67 PSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSV 126
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
V + G+ PN T++ LI+GFC RV+E +++ M E PN TV +L++G+
Sbjct: 127 VGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGL-- 184
Query: 128 CLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
CL +A L+ R ++ ++ +L R+ + + A + RKM +R
Sbjct: 185 CLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASV 244
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+ + L +L++ + + +G+K Y ++ L GR +G + L
Sbjct: 245 VQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLRE 304
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++ NV +++ +ID F K + A E+ EM R IAP+ +T+++LI G CK+
Sbjct: 305 MIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENR 364
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL-------------------- 345
+ + ++L +++ G +P+ T++ +I+ C+A R ++ +
Sbjct: 365 LGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNT 424
Query: 346 ---------------DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+ EMV GVPP+ +TY IL+ LC G++ ++L +F+KMQ R
Sbjct: 425 LVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSR 484
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ I +N +I C +K++ A F S+ G++PD +Y+ +I L K G EA
Sbjct: 485 MILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEAD 544
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
F M+++GC P T N+++ + + ++++ K RG +
Sbjct: 545 MLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFA 591
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 189/446 (42%), Gaps = 74/446 (16%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y V++ + KS + LA F++M K Y+I+I +C+ G +D+AL L +ME
Sbjct: 212 YGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEME 271
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G +V Y+ +I G CN R + ++L M RN+ PN T +L+ VF
Sbjct: 272 MKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALID-VF-----V 325
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
K +LL EA + +M RG P++ T+ +
Sbjct: 326 KEGKLL-----------------------------EAKELYNEMVARGIAPDTITYSSLI 356
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L E +LD + +G +P TY +L+ + KA R G R + LV
Sbjct: 357 DGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLV 416
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
++ +YN ++ FC+ ++ A E+ +EM R + P++VT+ L+ G C + E+ K E+
Sbjct: 417 ADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEI 476
Query: 313 LVML------------------------------LEC-----GFKPDKFTFNSMIDCLCR 337
+ L C G KPD T+N MI LC+
Sbjct: 477 FEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCK 536
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
+A +M E G P+ TYNILIR+ V S+ L ++M+ + D T
Sbjct: 537 KGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADAST 596
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLT 423
++ M + +K F ML+
Sbjct: 597 IKMVVV----MLSDGRLDKTFLDMLS 618
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 159/376 (42%), Gaps = 4/376 (1%)
Query: 112 CPNEATV---RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE 168
C +EA V L +G+ + ++A +L ++ PL + + L ++
Sbjct: 29 CISEAKVSYKERLRNGIVD-IKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDL 87
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
++M G T + + C L ++ +K G +P T+ L+
Sbjct: 88 VLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLIN 147
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
GR E ++ + + + NV + N +I+ C + A + M
Sbjct: 148 GFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEA 207
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
N +T+ +++ CK +L + E K ++ +ID LC+ +DAL
Sbjct: 208 NEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLF 267
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
+EM G+ + + Y+ +I LC G ++ ++M I P++ TF+ALI F +
Sbjct: 268 NEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKE 327
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
K+ +A++ + M+ G+ PD +YS+LI K R EA Q M GC P+ T
Sbjct: 328 GKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTY 387
Query: 469 NLILETLVQQGRFEEA 484
++++ + + R +
Sbjct: 388 SILINSYCKAKRVDNG 403
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y+ +I++ K+ +D F ++S D TYN L+ G C+ G ++ A
Sbjct: 379 GCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVA 438
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++M G P+V TY IL+DG C+ + + + E M++ + ++HG
Sbjct: 439 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHG 498
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A+ L + L N ++ L SEA + RKM + G P
Sbjct: 499 MCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPS 558
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
T++ + + G + + +++ RG ST
Sbjct: 559 DCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADAST 596
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS G+ T YN ++ +S +++A FQ+M P TY IL+ G+C G
Sbjct: 410 ISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 469
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ +AL + ++M+ + Y I+I G CNA +V + + + + + V P+ T
Sbjct: 470 LQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNV 529
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ + +A L + E N L+ S + ++ +M RG
Sbjct: 530 MIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRG 589
Query: 181 YLPESSTFDYTVTCLVTG 198
+ ++ST V L G
Sbjct: 590 FAADASTIKMVVVMLSDG 607
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 223/493 (45%), Gaps = 35/493 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P VI++L N +D A+ ++ +PD T+ LI G+C G + EA
Sbjct: 100 GIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEA 159
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M G G+ PNV TY LI+G C + R+L M++ N PN +L+
Sbjct: 160 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDS 219
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF + + + + N+L++ L ++ +M D +P+
Sbjct: 220 LCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPD 279
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T + V L + E ++D I RGV+P
Sbjct: 280 VFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP-------------------------- 313
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
NV +YN ++D C N +D A ++ M +D N++++NTLI+G+CK
Sbjct: 314 ---------NVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQ 364
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V K L + P+ T+N++I LC R +DA+ EMV G P+ +TY
Sbjct: 365 SVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYR 424
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L LC + +++ L + ++ PDI + ++ CR ++E A F ++ +
Sbjct: 425 TLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSK 484
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL+P+ ++Y+ +I L K G EA + F M +NGC+P+ T NLI ++
Sbjct: 485 GLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRT 544
Query: 485 HDIVKTSKERGIS 497
++++ RG S
Sbjct: 545 IELLEEMLARGFS 557
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 208/451 (46%), Gaps = 6/451 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P + +I L I A F +M + +P+ TY LI+G+C++G
Sbjct: 134 LGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSA 193
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+RL++ ME PNV ++ LID C ++V E F + M + + PN T SL+H
Sbjct: 194 AIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIH 253
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + + L+ ++ + + NT++ L M +EA ++ M RG P
Sbjct: 254 GLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP 313
Query: 184 ESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
T++ + CL +D+ + DT + + +Y L+ K + V+
Sbjct: 314 NVVTYNALMDGHCLRNEVDV--AVKVFDTMVHKDCVANVISYNTLINGYCKI-QSVDKAM 370
Query: 242 YL-NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
YL + + L N +YN +I C V + A + EM R P+LVT+ TL
Sbjct: 371 YLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYL 430
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ + K LL + + PD + +++D +CRA EDA D S + G+ PN
Sbjct: 431 CKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNV 490
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
TYNI+I LC G +A + +LF +M + SP+ T+N + + F R N+ + +
Sbjct: 491 WTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEE 550
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
ML G D + + L+ L G KQ
Sbjct: 551 MLARGFSVDVSTTTLLVGMLSDDGLDQSVKQ 581
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y + D L K+ +D A + + PD Y ++ G+CR G +++A
Sbjct: 415 GQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDA 474
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + G PNV+TY I+I G C +AE ++ M + PN+ T + G
Sbjct: 475 RDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRG 534
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
R + + ELL + R L+ LS++ + IL K+
Sbjct: 535 FLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKI 586
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P+ YN +I L K + A F +M+ + C P+ TYN++ G R
Sbjct: 481 LSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNE 540
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILI-----DGFCNAKRVAEVFRVLEIMKERNV 111
+ L+++M G++ +V T T+L+ DG + V ++ + I+ ERN+
Sbjct: 541 ALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGL--DQSVKQILCKIVILYERNL 594
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/498 (26%), Positives = 244/498 (48%), Gaps = 3/498 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS +N+++ L K +D A F+ M D +P+ TYNI+I +C G V+EA
Sbjct: 349 GCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD-AEPNSSTYNIIIDMLCLGGRVEEA 407
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++ +ME PN+ T I++D C A+++ E +++ E +R P+ T SL+ G
Sbjct: 408 YRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDG 467
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A+ L + ++ +V +L+ + + I +++ RG P+
Sbjct: 468 LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPD 527
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + C+ ++ + I + G P +Y +L+ L KAG+ E +
Sbjct: 528 LTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFH 587
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + +YN V+D FCK + +A EI EM+++ + P + T+ ++ G K
Sbjct: 588 AMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKID 647
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L G + + ++S+ID + R ++A L EM++ G+ PN T+N
Sbjct: 648 RLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 707
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ +L ++ +L FQ M+ + P+ YT++ LI CR+ K KA + M
Sbjct: 708 SLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQ 767
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL P+ +Y+ +I L K G +A F + NG PD+ + N ++E + R EA
Sbjct: 768 GLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 827
Query: 485 HDIVKTSKERG--ISFKS 500
+ + + ++ RG I+ KS
Sbjct: 828 YQVFEETRLRGCRINIKS 845
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/529 (23%), Positives = 237/529 (44%), Gaps = 42/529 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P LYN ID K+ ++D+A+ F ++ KPD +Y +I +C+ G + EA
Sbjct: 245 LEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAE 304
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L QME P Y Y +I G+ +A R + +++LE ++ER P+ + S +
Sbjct: 305 ELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNS----I 360
Query: 126 FRCLDPHKAFE---LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
CL + + L M+++ N ++ L EA IL +M
Sbjct: 361 LTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLF 420
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA--------- 233
P T + V L L E I ++ +RG P TY L++ L K
Sbjct: 421 PNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRL 480
Query: 234 --------------------------GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
GR +G + + + ++ N +DC K
Sbjct: 481 FEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFK 540
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+++ I ++R P++ +++ LI G K + +T + + + GF D
Sbjct: 541 AGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARA 600
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+N+++D C++ + A + L EM E V P TY ++ L I + + LF++ +
Sbjct: 601 YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 660
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ I ++ +++LI F ++ +I++A M+ GL P+ +++++L+ AL+K+ +
Sbjct: 661 SKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEIN 720
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
EA F SM++ C P++YT ++++ L + ++ +A + +++G+
Sbjct: 721 EALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGL 769
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/515 (21%), Positives = 222/515 (43%), Gaps = 36/515 (6%)
Query: 19 ALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGY-- 76
ALV++ +D A L M + +P Y +LI + + AL L++QM+ +GY
Sbjct: 153 ALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEV 212
Query: 77 ---------------------------------APNVYTYTILIDGFCNAKRVAEVFRVL 103
P++ Y + ID F A V ++
Sbjct: 213 GVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFF 272
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
+K + + P++ + S++ + + +A EL + + NT++ +
Sbjct: 273 HELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSA 332
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
+A +L ++ +RG +P +F+ +TCL ++E + + +K+ +P STY
Sbjct: 333 GRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEV-MKKDAEPNSSTY 391
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
++++ L GR E R L+ + L N+ + N+++D CK ++ A +I
Sbjct: 392 NIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQ 451
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
R P+ VT+ +LI G K +V + L +L+ G + + S+I R ED
Sbjct: 452 RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKED 511
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
E++ G P+ N + + G+V + +F+ +++ PD+ +++ LI
Sbjct: 512 GHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIH 571
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ + + F +M G D +Y+A++ KSG+ +A + M++ P
Sbjct: 572 GLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQP 631
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
T I++ L + R +EA+ + + +K +GI
Sbjct: 632 TVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIEL 666
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 193/430 (44%), Gaps = 1/430 (0%)
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+++++M LGY L A+R+ + + +M+ P + L+ +
Sbjct: 130 KVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGAL 189
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
P +A ELL + E + TL+ L+ ++A A++ ++ P+
Sbjct: 190 AEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDI 249
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
++ + C +++ +G+KP +Y ++ L KAGR E +
Sbjct: 250 VLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQ 309
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ +R V +YN +I + + A ++ +R+R P++V+FN++++ K +
Sbjct: 310 MEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRK 369
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V + L ++ + +P+ T+N +ID LC R E+A L EM + PN +T NI
Sbjct: 370 VDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNI 428
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
++ LC + + ++F+ +PD T+ +LI + ++++A + F ML G
Sbjct: 429 MVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG 488
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ Y++LI+ GR ++ + F + + GC PD N ++ + + G E+
Sbjct: 489 HNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGR 548
Query: 486 DIVKTSKERG 495
I + + G
Sbjct: 549 MIFEDIRSYG 558
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 172/416 (41%), Gaps = 53/416 (12%)
Query: 131 PHKAFELLIRFMEREPLTQKLVCN---TLLYRLSNNSMASEAAAILRK------------ 175
P A+ ++ F+ + + V L Y L N + A AAA++R
Sbjct: 110 PADAYHAVLPFLHHDLAALEKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAV 169
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
M + P S + + L +L + G + + L+ AL + G+
Sbjct: 170 MRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQ 229
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
+ ++ V L ++ YN+ IDCF K +D A + E++ + + P+ V++ +
Sbjct: 230 VADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTS 289
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
+I CK + + EL + P + +N+MI A RFEDA L + E G
Sbjct: 290 MIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG 349
Query: 356 -VP---------------------------------PNTITYNILIRSLCAIGDVARSLR 381
+P PN+ TYNI+I LC G V + R
Sbjct: 350 CIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYR 409
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
+ +M+ + P++ T N ++ C+ K+E+A K F S G PD +Y +LI L
Sbjct: 410 ILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLG 469
Query: 442 KSGRFDEAKQTFLSMEQNG--CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
K G+ DEA + F M G NP YTS ++ GR E+ H I K RG
Sbjct: 470 KKGQVDEAYRLFEKMLDAGHNANPVVYTS--LIRNFFIHGRKEDGHKIFKELIRRG 523
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 5/186 (2%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
F+P + +I L A R E AL+ L +M E G + L+R+L G VA +L
Sbjct: 175 FRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADAL 234
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
L +++ + PDI +N I F + ++ A K F + GL+PD+ SY+++I L
Sbjct: 235 ALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVL 294
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG----- 495
K+GR EA++ F ME P +Y N ++ GRFE+A+ +++ +ERG
Sbjct: 295 CKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSV 354
Query: 496 ISFKSF 501
+SF S
Sbjct: 355 VSFNSI 360
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 135/509 (26%), Positives = 244/509 (47%), Gaps = 13/509 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN V+ AL K + + QM P+R TYNIL+HG C++ + EA
Sbjct: 241 GCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEA 300
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ M G G P+V+TY ++ G C+ ++ E R+ + M+ + P+ T +L+ G
Sbjct: 301 AEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDG 360
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F AF+L+ R + N ++ EA+ ++ KM + G+ P+
Sbjct: 361 CFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPD 420
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK-PRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + + E ++D ++G+K F+ LL + D +
Sbjct: 421 CFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTM 480
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ ++ V +Y +I + K DRA ++ EM++ I ++T+NT+I G C
Sbjct: 481 KARKRGYILDEV-TYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLS 539
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + + L LLE G PD+ T N +I C E A ++MVE + P+ T
Sbjct: 540 GKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTC 599
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NIL+R LC G + + L LF + D T+N +I SFC+ ++E A M
Sbjct: 600 NILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEG 659
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG-------CNPDSYTSNLI----L 472
L PD ++Y+A++ L K+GR +EA++ L + G +P+ TS+++ +
Sbjct: 660 KNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQI 719
Query: 473 ETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+L QG++++A + + ++++G+S +
Sbjct: 720 SSLCTQGKYKDAMKLFQQAEQKGVSLNKY 748
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 232/497 (46%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ +N +I N+ + A QM C PD TYN ++ +C+ + +
Sbjct: 205 LGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQ 264
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L+ QM+ G PN TY IL+ G+C K + E V+E+M + + P+ T ++V
Sbjct: 265 VRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVR 324
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ +A L + + + + NTL+ + + A ++ +M RG
Sbjct: 325 GLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKE 384
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T + + T ++E ++ ++ G P TY ++ KAG+ E + +
Sbjct: 385 NGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMM 444
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + L + + N ++ C +D A + + R R + VT+ TLI G+ KD
Sbjct: 445 DEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKD 504
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + +L + E G T+N++I LC + + + A+D L+E++E G+ P+ T
Sbjct: 505 EQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTS 564
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI+I C G V ++ + KM + PDI+T N L++ CR +EK F + ++
Sbjct: 565 NIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWIS 624
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G D +Y+ +I + K R ++A ME PD YT N I+ L + GR EE
Sbjct: 625 KGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEE 684
Query: 484 AHDIVKTSKERGISFKS 500
A + E+G K+
Sbjct: 685 AEKLALKFAEKGQQVKT 701
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 198/416 (47%), Gaps = 15/416 (3%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN +ID + D A+ ++M K + T+NI+I C G +DEA +
Sbjct: 349 PDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNV 408
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M G++P+ +TY +I+G+C A ++AE +++++ M + + + T+ +L+H +
Sbjct: 409 MVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTM-- 466
Query: 128 CLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
CL+ A+ L ++ +R + ++ TL+ + A A + +M + G +
Sbjct: 467 CLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATI 526
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + L ++ L+ +++G+ P ST +++ G + ++ N
Sbjct: 527 ITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNK 586
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + L ++ + N+++ C+ M+++ + + + VT+N +IS CK+
Sbjct: 587 MVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERR 646
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT----- 360
+ +L+ + +PD++T+N+++ L +A R E+A + E G T
Sbjct: 647 LEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSP 706
Query: 361 ------ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
+ Y+ I SLC G +++LFQ+ + +S + YT+ L+ + K
Sbjct: 707 ELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRK 762
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 134/248 (54%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NVN++N++I +C N + A + +M + P+ VT+NT+++ CK +++ + R+LL
Sbjct: 210 NVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLL 269
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ + G P++ T+N ++ C+ ++A + + M G+ P+ TYN ++R LC
Sbjct: 270 LQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDE 329
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G + ++RL KM++ ++ PD+ T+N LI + A K M G++ + ++
Sbjct: 330 GKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTH 389
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ +IK G+ DEA + M ++G +PD +T N ++ + G+ EA+ ++
Sbjct: 390 NIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGR 449
Query: 494 RGISFKSF 501
+G+ +F
Sbjct: 450 KGLKLDTF 457
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 117/224 (52%), Gaps = 3/224 (1%)
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHK---TRELLVMLLECGFKPDKFTFNSMI 332
+I +M+ PNL+T NTL++ + H +RE+ ++ G +P+ TFN +I
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILI 218
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
C + E+AL +++M E+G P+ +TYN ++ +LC + + L +M+ +
Sbjct: 219 HGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLF 278
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
P+ T+N L+ +C++ +++A + M G+ PD ++Y+ +++ L G+ DEA +
Sbjct: 279 PNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRL 338
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
ME PD T N +++ + + A +V+ K RG+
Sbjct: 339 RDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGV 382
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLA---YLKF----QQMSVDQCKPDRFTYNIL----IHG 54
+ P YNA++ L K+ + A LKF QQ+ P+ T +++ I
Sbjct: 662 LEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISS 721
Query: 55 ICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
+C G +A++L +Q E G + N YTY L+DG ++ +L M
Sbjct: 722 LCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLLPFM 773
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 240/493 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ + + +I+ + + LA+ ++ +P+ T++ LI+G+C G V EA
Sbjct: 216 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 275
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L LV +M +G+ P++ T L++G C + + AE +++ M E PN T +++
Sbjct: 276 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 335
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A ELL + ER + + ++ L + A + +M +G
Sbjct: 336 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 395
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + ++ +L IKR + P T+ +L+++ K G+ E +
Sbjct: 396 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 455
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + +Y +ID FCK N +D+A ++ M + PN+ TFN LI+G+CK
Sbjct: 456 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 515
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ EL + G D T+N++I C + A + EMV VPPN +TY
Sbjct: 516 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 575
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
IL+ LC G+ ++L +F+K++ ++ DI +N +I C +K++ A F S+
Sbjct: 576 ILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 635
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G++P +Y+ +I L K G EA+ F ME++G PD +T N+++ + G ++
Sbjct: 636 GVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKS 695
Query: 485 HDIVKTSKERGIS 497
+++ K G S
Sbjct: 696 VKLIEELKRCGFS 708
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 230/491 (46%), Gaps = 4/491 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P+T ++ +I+ L + A +M KPD T N L++G+C G E
Sbjct: 250 LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAE 309
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+ +M G PN TY +++ C + + A +L M+ERN+ + ++
Sbjct: 310 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 369
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + AF L ME + +T ++ N L+ N + A +LR M R
Sbjct: 370 GLCKHGSLDNAFNLFNE-MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 428
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P TF + V L E + I RG+ P TY L++ K + ++
Sbjct: 429 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 488
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
++ + N+ ++N++I+ +CK N +D E+ R+M R + + VT+NTLI G C+
Sbjct: 489 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 548
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+++ +EL ++ P+ T+ ++D LC E AL+ ++ + + +
Sbjct: 549 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 608
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YNI+I +C V + LF + + P + T+N +I C+ + +AE F M
Sbjct: 609 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 668
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV--QQGR 480
G PD ++Y+ LI+A + G ++ + +++ G + D+ T ++++ L +
Sbjct: 669 EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDDKANY 728
Query: 481 FEEAHDIVKTS 491
F + H+ K++
Sbjct: 729 FSKYHNCSKST 739
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 218/482 (45%), Gaps = 40/482 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+S RL + ++D + ++IDL F+ M + P ++ L I + D L
Sbjct: 152 LSYRERLRSGLVD-IKADDAIDL----FRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVL 206
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L KQME G A N+YT +I+I+ FC +++ F + + + PN T +L++G+
Sbjct: 207 ALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGL 266
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
CL+ SEA ++ +M + G+ P+
Sbjct: 267 --CLE---------------------------------GRVSEALELVDRMVEMGHKPDL 291
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T + V L E ++D ++ G +P TY ++ + K+G+ L
Sbjct: 292 ITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 351
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + + + Y+++ID CK +D A + EM + I N++T+N LI G C
Sbjct: 352 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 411
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+LL +++ P+ TF+ +ID + + +A + EM+ G+ P+TITY
Sbjct: 412 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 471
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI C + ++ ++ M + P+I TFN LI +C+ N+I+ + F M G
Sbjct: 472 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 531
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ D +Y+ LI+ + G+ + AK+ F M P+ T ++L+ L G E+A
Sbjct: 532 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 591
Query: 486 DI 487
+I
Sbjct: 592 EI 593
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 187/445 (42%), Gaps = 8/445 (1%)
Query: 53 HGICRIGVVDEALRLVKQMEGLGYAPNVYTYTIL-IDGFCNAKRVAEVFRVLEIMKERNV 111
G + V D LR + G PN + I +D + K E F + +RN+
Sbjct: 95 EGTGFVAVAD--LRHILTSIGEKLEPNEFDEWIKEVDVGSDGKIRYEDFIARMVANDRNL 152
Query: 112 CPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAA 171
E LV + A +L + PL + + L ++ A
Sbjct: 153 SYRERLRSGLVD-----IKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLA 207
Query: 172 ILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY 231
+ ++M +G T + C L + IK G +P T+ L+ L
Sbjct: 208 LCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLC 267
Query: 232 KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
GR E ++ + + ++ + N +++ C A + +M + PN V
Sbjct: 268 LEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV 327
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
T+ +++ CK + ELL + E K D ++ +ID LC+ ++A + +EM
Sbjct: 328 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 387
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
G+ N ITYNILI C G +L + M +I+P++ TF+ LI SF + K+
Sbjct: 388 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 447
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
+AE+ M+ G+ PD +Y++LI K D+A Q M GC+P+ T N++
Sbjct: 448 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 507
Query: 472 LETLVQQGRFEEAHDIVKTSKERGI 496
+ + R ++ ++ + RG+
Sbjct: 508 INGYCKANRIDDGLELFRKMSLRGV 532
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 180/403 (44%), Gaps = 21/403 (5%)
Query: 105 IMKERNVCPNEATVRSLV--HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
+M+ P +A ++S++ + D ++ +L+ + ++ EP ++L L
Sbjct: 37 LMRSLGGNPTQAQLKSIIASENLSSPFDFNRFLDLMAKHLKTEPFDRQL--RDAFKVLDK 94
Query: 163 NSMASEAAAILRK-MGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL--DTFIKRGV-KP 218
A A LR + G E + FD + + G D G + + FI R V
Sbjct: 95 EGTGFVAVADLRHILTSIGEKLEPNEFDEWIKEVDVGSD-----GKIRYEDFIARMVAND 149
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKD----RLVSNVNSYNMVIDCFCKVNMMDRA 274
R +Y E L D++ D ++ +F+D R + V ++ + K D
Sbjct: 150 RNLSY---RERLRSGLVDIKADDAID-LFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLV 205
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+C++M + IA NL T + +I+ C+ ++ + +++ G++P+ TF+++I+
Sbjct: 206 LALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLING 265
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LC R +AL+ + MVE G P+ IT N L+ LC G A ++ L KM P+
Sbjct: 266 LCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPN 325
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
T+ ++ C+ + A + M ++ D YS +I L K G D A F
Sbjct: 326 AVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFN 385
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
ME G + T N+++ GR+++ +++ +R I+
Sbjct: 386 EMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 428
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 92/196 (46%), Gaps = 2/196 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ T YN +I + +++A FQ+M + P+ TY IL+ G+C G
Sbjct: 527 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 586
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
++AL + +++E ++ Y I+I G CNA +V + + + + + V P T
Sbjct: 587 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 646
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREP-LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
++ G+ + P ELL R ME + N L+ + A+++ ++ ++
Sbjct: 647 MIGGLCK-KGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRC 705
Query: 180 GYLPESSTFDYTVTCL 195
G+ ++ST + L
Sbjct: 706 GFSVDASTIKMVIDML 721
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 223/493 (45%), Gaps = 35/493 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P VI++L N +D A+ ++ +PD T+ LI G+C G + EA
Sbjct: 100 GIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEA 159
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M G G+ PNV TY LI+G C + R+L M++ N PN +L+
Sbjct: 160 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDS 219
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF + + + + N+L++ L ++ +M D +P+
Sbjct: 220 LCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPD 279
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T + V L + E ++D I RGV+P
Sbjct: 280 VFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP-------------------------- 313
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
NV +YN ++D C N +D A ++ M +D N++++NTLI+G+CK
Sbjct: 314 ---------NVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQ 364
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V K L + P+ T+N++I LC R +DA+ EMV G P+ +TY
Sbjct: 365 SVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYR 424
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L LC + +++ L + ++ PDI + ++ CR ++E A F ++ +
Sbjct: 425 TLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSK 484
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL+P+ ++Y+ +I L K G EA + F M +NGC+P+ T NLI ++
Sbjct: 485 GLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRT 544
Query: 485 HDIVKTSKERGIS 497
++++ RG S
Sbjct: 545 IELLEEMLARGFS 557
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 208/451 (46%), Gaps = 6/451 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P + +I L I A F +M + +P+ TY LI+G+C++G
Sbjct: 134 LGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSA 193
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+RL++ ME PNV ++ LID C ++V E F + M + + PN T SL+H
Sbjct: 194 AIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIH 253
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + + L+ ++ + + NT++ L M +EA ++ M RG P
Sbjct: 254 GLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP 313
Query: 184 ESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
T++ + CL +D+ + DT + + +Y L+ K + V+
Sbjct: 314 NVVTYNALMDGHCLRNEVDV--AVKVFDTMVHKDCVANVISYNTLINGYCKI-QSVDKAM 370
Query: 242 YL-NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
YL + + L N +YN +I C V + A + EM R P+LVT+ TL
Sbjct: 371 YLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYL 430
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ + K LL + + PD + +++D +CRA EDA D S + G+ PN
Sbjct: 431 CKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNV 490
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
TYNI+I LC G +A + +LF +M + SP+ T+N + + F R N+ + +
Sbjct: 491 WTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEE 550
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
ML G D + + L+ L G KQ
Sbjct: 551 MLARGFSVDVSTTTLLVGMLSDDGLDQSVKQ 581
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 72/171 (42%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y + D L K+ +D A + + PD Y ++ G+CR G +++A
Sbjct: 415 GQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDA 474
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + G PNV+TY I+I G C +AE ++ M + PN+ T + G
Sbjct: 475 RDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRG 534
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
R + + ELL + R L+ LS++ + IL K
Sbjct: 535 FLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCK 585
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P+ YN +I L K + A F +M+ + C P+ TYN++ G R
Sbjct: 481 LSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNE 540
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILI 87
+ L+++M G++ +V T T+L+
Sbjct: 541 ALRTIELLEEMLARGFSVDVSTTTLLV 567
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 230/501 (45%), Gaps = 15/501 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P N +++ +D A + M ++C PD +Y ++ G+C+ G V+EA+RL
Sbjct: 210 PCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRL 269
Query: 68 VKQME------GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
E P++ Y I+I G C R+ E ++ E M ERNV P+ + L
Sbjct: 270 FGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGIL 329
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ G+ + + A L + + + +L++ L + +A + M RG
Sbjct: 330 IDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGC 389
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P T++ + L E C ++ I+ G P TY +M+ L K+ R E
Sbjct: 390 PPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALL 449
Query: 242 YLNHVFKDRLVSNVNSYNMVI---------DCFCKVNMMDRATEICREMRDRDIAPNLVT 292
N + + N S+N +I D C+ +D A + + M D P++VT
Sbjct: 450 LFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVT 509
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
++TLISG C A V R LL +++ KP T N++I LC+A R ++A + L MV
Sbjct: 510 YSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMV 569
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
G P+ +TYN L+ C G R+ L M A ++P++ T+ AL+ C+ N++
Sbjct: 570 SSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLP 629
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
+A F M + G P+ F+Y+ALI +G+ D + F M G +PD +
Sbjct: 630 EACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLA 689
Query: 473 ETLVQQGRFEEAHDIVKTSKE 493
L + GR A +I++ +E
Sbjct: 690 AELCKSGRSARALEILREGRE 710
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 222/483 (45%), Gaps = 32/483 (6%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
R YN VI L +++ ID A F++M+ PD ++Y ILI G+ + G +++A L ++
Sbjct: 289 RGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQK 348
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
+ G P+ YT LI G C A + + M R P+ T ++ +
Sbjct: 349 LLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGM 408
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A +L+ + +E + + NT++ L +S EA + +M G P + +
Sbjct: 409 LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNT 468
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L +++ C + G+ E R L + D
Sbjct: 469 IILGLCQQSKIDQAC--------------------------QRGKLDEAFRLLKRMTDDG 502
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
V +V +Y+ +I C + +D A + +M R P +VT NTLI G CK + + R
Sbjct: 503 HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAR 562
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
E+L ++ G PD T+N+++ CRA + E A + LS+MV G+ PN +TY L+ L
Sbjct: 563 EVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 622
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C + + +F +M++ +P+++T+ ALI FC +++ K F M+ G+ PD+
Sbjct: 623 CKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDH 682
Query: 431 FSYSALIKALIKSGRFDEA----KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
Y L L KSGR A ++ S+ + Y ++ L++ G+ E A
Sbjct: 683 VVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVY--RFAVDGLLEAGKMEMALG 740
Query: 487 IVK 489
V+
Sbjct: 741 FVR 743
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 210/453 (46%), Gaps = 32/453 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++PST Y ++I L +NS D A F M+ C P TYN++I C+ G+++EA
Sbjct: 353 GVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEA 412
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+K+M G+ P+V TY ++DG C + RV E + M+ PN + +++ G
Sbjct: 413 CDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILG 472
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + + + EA +L++M D G++P+
Sbjct: 473 LCQ--------------------------QSKIDQACQRGKLDEAFRLLKRMTDDGHVPD 506
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ ++ L + +++ +L+ +KR KP T L+ L KAGR E L+
Sbjct: 507 VVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLD 566
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +V +YN ++ C+ +RA E+ +M R +APN+VT+ L+SG CK
Sbjct: 567 AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN 626
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + + G P+ FT+ ++I C A + + L EMV G+ P+ + Y
Sbjct: 627 RLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYG 686
Query: 365 ILIRSLCAIGDVARSLRLF----QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
L LC G AR+L + + ++++ ++Y F + K+E A
Sbjct: 687 TLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFA--VDGLLEAGKMEMALGFVRD 744
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
M+ G P ++L+ L KSG+ EA+
Sbjct: 745 MVRGGQLPAPERCASLVAGLCKSGQGGEARAVL 777
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/575 (23%), Positives = 242/575 (42%), Gaps = 90/575 (15%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ-CKPDRFTYNILIHGICRIGVVDEAL 65
SP +YN +ID+L K + A K Q+ VD+ C PD FT+ ++ G+C+ G +DEA
Sbjct: 41 SPYPDVYNVLIDSLSKRQETE-AVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAE 99
Query: 66 RLVKQMEGLGYAP-------------------------------NVYTYTILIDGFCNAK 94
++ +M P N Y I++ C A
Sbjct: 100 LVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAA 159
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME--REPLTQKLV 152
RV + + M E+ + ++ S++ G+ +D + E L + E REP L
Sbjct: 160 RVDDALELARTMSEKRIPLAAGSLDSVLVGL---MDSGRIDEALQVYRENRREPCLVTL- 215
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST------------------------- 187
N LL + +A +LR M D P+ +
Sbjct: 216 -NVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRE 274
Query: 188 ----------------FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY 231
++ + L ++E + + +R V P +Y +L++ L
Sbjct: 275 LPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLA 334
Query: 232 KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
KAG+ + + + + +Y +I C N D A E+ +M R P+ V
Sbjct: 335 KAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPV 394
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
T+N +I CK + + +L+ ++E G PD T+N+++D LC++ R E+AL +EM
Sbjct: 395 TYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM 454
Query: 352 VEWGVPPNTITYNILIRSLCAI---------GDVARSLRLFQKMQADRISPDIYTFNALI 402
G PN ++N +I LC G + + RL ++M D PD+ T++ LI
Sbjct: 455 ERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLI 514
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
C + +++ A M+ +P + + LI L K+GR EA++ +M +G +
Sbjct: 515 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 574
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
PD T N ++ + G+ E A +++ RG++
Sbjct: 575 PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLA 609
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/507 (23%), Positives = 228/507 (44%), Gaps = 24/507 (4%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN V+ AL K+ +D A + MS + + + ++ G+ G +DEAL++ ++
Sbjct: 148 YNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENR 207
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
P + T +L++GFC+ +V + +L M + P+E + +++ G+ +
Sbjct: 208 ---REPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVE 264
Query: 133 KAFELLIRFMEREPLTQKLVC---------NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+A L F +RE + N ++ L N EA + KM +R P
Sbjct: 265 EAVRL---FGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSP 321
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+S ++ + L LN+ + + GV P Y L+ L A +
Sbjct: 322 DSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELF 381
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + +YN++ID CK M++ A ++ ++M + P++VT+NT++ G CK
Sbjct: 382 ADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 441
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFN---------SMIDCLCRAHRFEDALDCLSEMVEW 354
+ V + L + G P++ + N S ID C+ + ++A L M +
Sbjct: 442 SRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDD 501
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G P+ +TY+ LI LC+I V + L + M + P + T N LI C+ +I++A
Sbjct: 502 GHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA 561
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
+ +M++ G PD +Y+ L+ ++G+ + A++ M G P+ T ++
Sbjct: 562 REVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSG 621
Query: 475 LVQQGRFEEAHDIVKTSKERGISFKSF 501
L + R EA + K G + F
Sbjct: 622 LCKANRLPEACGVFAQMKSSGCAPNLF 648
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 195/459 (42%), Gaps = 78/459 (16%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
G P +T +I G+CN R E ++ +M+E C P+
Sbjct: 5 GIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEE-------------------CHSPYPD 45
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
V N L+ LS +++ M DRG P+S TF +
Sbjct: 46 -----------------VYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCG 88
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
L ++E ++D R + P F+T L L G +E L + V+N
Sbjct: 89 LCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRG-SMERAFQLLEIMP---VAN 144
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIA--------------------------- 287
++YN+V+ CK +D A E+ R M ++ I
Sbjct: 145 SSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYR 204
Query: 288 -----PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
P LVT N L+ G C +V K RELL + + PD+ ++ +++D LC+A R E
Sbjct: 205 ENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVE 264
Query: 343 DALDCLSE------MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
+A+ + PP+ YNI+I LC + ++++F+KM +SPD +
Sbjct: 265 EAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSW 324
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
++ LI + K+ A F +L G+ P +Y++LI L + FD+A++ F M
Sbjct: 325 SYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 384
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ GC P T N++++ ++G EEA D++K E G
Sbjct: 385 NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDG 423
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 106/244 (43%), Gaps = 41/244 (16%)
Query: 281 MRDRDIAPNLVTFNTLISGHC----------------------------------KDAEV 306
M + I P + F ++I G C K E
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQET 60
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
++++ ++++ G PD FTF +++ LC+A + ++A + EM +PP T + L
Sbjct: 61 EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
LC G + R+ +L + M S +N ++ + C+ +++ A + +M +
Sbjct: 121 AHELCLRGSMERAFQLLEIMPVANSS----AYNIVVVALCKAARVDDALELARTMSEKRI 176
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
S +++ L+ SGR DEA Q + +N P T N++LE +G+ ++A +
Sbjct: 177 PLAAGSLDSVLVGLMDSGRIDEALQVY---RENRREPCLVTLNVLLEGFCSRGQVDKARE 233
Query: 487 IVKT 490
+++
Sbjct: 234 LLRA 237
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
I P F ++IQ +C + + +A K FS++ P Y+ LI +L K + K
Sbjct: 6 IFPAPLLFTSVIQGWCNVGRTFEAVK-IFSLMEECHSPYPDVYNVLIDSLSKRQETEAVK 64
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ M GC PDS+T IL L + G+ +EA ++ + R I
Sbjct: 65 KMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMI 110
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 235/491 (47%), Gaps = 8/491 (1%)
Query: 6 ISPST--RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+SP+T LY A I A ++ + A F++M + C P YN ++ + D+
Sbjct: 45 LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 104
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ +M G +P+++T+TI + FC R R+L + R ++V
Sbjct: 105 AHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVC 160
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G++ H A +L + + N +L+ L EA +L K+ RG
Sbjct: 161 GLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSI 220
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + L L E ++D V P TY L+ L K E YL
Sbjct: 221 NLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYL 279
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + +YN +ID +CK++M+ ATE+ ++ + P+ VT+ +LI+G C +
Sbjct: 280 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 339
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V + EL G KPD +NS++ LC AL ++EM E G P+ TY
Sbjct: 340 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 399
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI+I LC +G+++ + + PD++TFN LI +C+ K++ A + M
Sbjct: 400 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 459
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ PD +Y++++ L K+G+ +E +TF M GC+P+ T N+++E + + EE
Sbjct: 460 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 519
Query: 484 AHD-IVKTSKE 493
A IVK S+E
Sbjct: 520 ASKVIVKMSQE 530
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 231/499 (46%), Gaps = 36/499 (7%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F QM P+ +N ++H +C+ G V EA L+ ++ G + N++TY I I G C
Sbjct: 175 FDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCE 234
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
A R+ E R+++ M+ V P+ T +L+ G+ + P +A L R M + L
Sbjct: 235 AGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 293
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
NT++ SM EA +L+ +G++P+ T+ + L D+ + +
Sbjct: 294 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 353
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+G+KP Y L++ L G + + +N + ++ ++ +YN+VI+ CK+ +
Sbjct: 354 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNIS 413
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
AT + + + P++ TFNTLI G+CK ++ +L+ + E G PD T+NS++
Sbjct: 414 DATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVL 473
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
+ LC+A + + + EM+ G PN ITYNILI + C + + ++ KM + +
Sbjct: 474 NGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLH 533
Query: 393 PDIYTFNALIQSFCRMNKIEK-----------------------------------AEKA 417
PD +FN LI FCR +E AEK
Sbjct: 534 PDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKI 593
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F ML+ G R D+++Y LI K+ D A + M + G P T ++ +L
Sbjct: 594 FDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTV 653
Query: 478 QGRFEEAHDIVKTSKERGI 496
R +A I+ + G+
Sbjct: 654 NHRVFQAVGIIHIMVKIGV 672
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 194/427 (45%), Gaps = 10/427 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN +I L K + A ++M C PD FTYN +I G C+I +V EA L
Sbjct: 254 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 313
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV-F 126
+K G+ P+ TY LI+G C V + + + + P+ SLV G+
Sbjct: 314 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 373
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ L H A +++ E N ++ L S+A ++ +GYLP+
Sbjct: 374 QGLILH-ALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVF 432
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
TF+ + L L+ +++ + G+ P TY ++ L KAG+ E +N
Sbjct: 433 TFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNE----VNET 488
Query: 247 FKDRLVS----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
F++ ++ N +YN++I+ FC+ N M+ A+++ +M + P+ V+FNTLI G C+
Sbjct: 489 FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCR 548
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ ++ L L E G+ TFN++I A EM+ G ++ T
Sbjct: 549 NGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYT 608
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y +LI C +V R+ +M P + TF +I S +++ +A M+
Sbjct: 609 YRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMV 668
Query: 423 TLGLRPD 429
+G+ P+
Sbjct: 669 KIGVVPE 675
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 197/422 (46%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
PD TYN LI G+C+ + EA+ +++M G P+ +TY +IDG+C V E +
Sbjct: 254 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 313
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
L+ + P++ T SL++G+ D +A EL + +V N+L+ L
Sbjct: 314 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 373
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+ A ++ +M + G P+ T++ + L ++++ +++ I +G P T
Sbjct: 374 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 433
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
+ L++ K + + + +++ + + +YN V++ CK ++ E +EM
Sbjct: 434 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 493
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+ PN +T+N LI C+ ++ + +++V + + G PD +FN++I CR E
Sbjct: 494 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 553
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
A ++ E G T+N LI + ++ + ++F +M + D YT+ LI
Sbjct: 554 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 613
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
C+ +++A M+ G P ++ +I +L + R +A M + G
Sbjct: 614 DGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVV 673
Query: 463 PD 464
P+
Sbjct: 674 PE 675
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 172/391 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN +ID K + + A + PD+ TY LI+G+C G V+ A
Sbjct: 286 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 345
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L + + G P++ Y L+ G C + +V+ M E P+ T +++G
Sbjct: 346 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 405
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + A ++ + + L NTL+ A ++ +M + G P+
Sbjct: 406 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 465
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + L +NE I +G P TY +L+E ++ + E + +
Sbjct: 466 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 525
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ L + S+N +I FC+ ++ A + +++ ++ + TFNTLI
Sbjct: 526 KMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKL 585
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+H ++ +L G + D +T+ +ID C+ + A L EM++ G P+ T+
Sbjct: 586 NMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFG 645
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
+I SL V +++ + M + P++
Sbjct: 646 RVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 676
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 159/360 (44%), Gaps = 2/360 (0%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G P Y ++I+ L ++ A F + KPD YN L+ G+C G++
Sbjct: 319 FKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLIL 378
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
AL+++ +M G P++ TY I+I+G C +++ V+ + P+ T +L+
Sbjct: 379 HALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 438
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G + L A +L+ R E + N++L L +E ++M +G
Sbjct: 439 DGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCH 498
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T++ + + E ++ + G+ P ++ L+ + G D+EG
Sbjct: 499 PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNG-DLEGAYL 557
Query: 243 LNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L +++ S +++N +I F M A +I EM + + T+ LI G C
Sbjct: 558 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC 617
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K A V + LV +++ GF P TF +I+ L HR A+ + MV+ GV P +
Sbjct: 618 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 677
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/535 (26%), Positives = 249/535 (46%), Gaps = 43/535 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P Y VI+ K D AY + +M + PD TY+ +I +C+ +D+A
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ M G PN TY ++ G+C++++ E L+ M+ V P+ T SL+
Sbjct: 251 MEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDY 310
Query: 125 V---FRCLDPHKAFELLI-RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ R + K F+ + R +E + T C TLL + E A+L M G
Sbjct: 311 LCKNGRSTEARKIFDSMTKRGLEPDIAT---YC-TLLQGYATKGALVEMHALLDLMVRNG 366
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ F+ + ++E + + G+ P TY ++ L K+G +
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM 426
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
Y + + L N+ Y +I C + D+A E+ EM DR I N + FN++I H
Sbjct: 427 LYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSH 486
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ V ++ +L +++ G KP+ T++++ID C A + ++A LS M G+ P+
Sbjct: 487 CKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDC 546
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ----------------- 403
+TYN LI C + + +L LF++M + +SP+I T+N ++Q
Sbjct: 547 VTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVG 606
Query: 404 ------------------SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
C+ N ++A + F ++ L+ + +++ +I AL+K GR
Sbjct: 607 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 666
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
DEAK F++ NG P+ +T L+ E ++ QG EE + + ++ G + S
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDS 721
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 232/468 (49%), Gaps = 6/468 (1%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM---EGLGYAPN 79
S+++D+ + ++S C PD F+ IL+ G+C EAL L+ M G G AP+
Sbjct: 139 SDAMDIVLRRMTELS---CMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPD 195
Query: 80 VYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLI 139
V +YT +I+GF + + M +R + P+ T S++ + + KA E+L
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLT 255
Query: 140 RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL 199
++ + + N++L+ ++ EA L+KM G P+ T++ + L
Sbjct: 256 TMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNG 315
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
E I D+ KRG++P +TY L++ G VE L+ + ++ + + + +N
Sbjct: 316 RSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFN 375
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
++I + K +D A + +MR + PN+VT+ +I CK V +++
Sbjct: 376 ILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDE 435
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G P+ + S+I LC +++ A + + EM++ G+ NTI +N +I S C G V S
Sbjct: 436 GLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIES 495
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+LF M + P++ T++ LI +C K+++A K SM ++G++PD +Y+ LI
Sbjct: 496 EKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLING 555
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+ R D+A F M +G +P+ T N+IL+ L R A ++
Sbjct: 556 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 603
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/533 (24%), Positives = 233/533 (43%), Gaps = 41/533 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP Y+++I AL K ++D A M + P+ TYN ++HG C EA+
Sbjct: 227 ISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAI 286
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+K+M G P+V TY L+D C R E ++ + M +R + P+ AT +L+ G
Sbjct: 287 GFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGY 346
Query: 126 FR---CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
++ H +L++R V N L+ + EA + KM G
Sbjct: 347 ATKGALVEMHALLDLMVR---NGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLN 403
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY----------- 231
P T+ + L +++ + I G+ P Y L+ +L
Sbjct: 404 PNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEEL 463
Query: 232 ------------------------KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
K GR +E ++ + + + + NV +Y+ +ID +C
Sbjct: 464 ILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCL 523
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
MD AT++ M + P+ VT+NTLI+G+C+ + + L ++ G P+ T
Sbjct: 524 AGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 583
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+N ++ L R A + + + G TYNI++ LC +LR+FQ +
Sbjct: 584 YNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 643
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ + TFN +I + ++ + ++A+ F + + GL P+ ++Y + + +I G +
Sbjct: 644 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
E Q F SME NGC DS N I+ L+Q+G A + E+ S ++
Sbjct: 704 ELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEA 756
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 233/483 (48%), Gaps = 5/483 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN+++D L K+ A F M+ +PD TY L+ G G + E
Sbjct: 296 GVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEM 355
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G P+ + + ILI + ++V E V M++ + PN T +++
Sbjct: 356 HALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGI 415
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + A L M E LT ++ T L++ L +A ++ +M DRG
Sbjct: 416 LCKSGSVDDAM-LYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL 474
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ F+ + + E+ + D ++ GVKP TY L++ AG+ E + L
Sbjct: 475 NTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLL 534
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +F + + +YN +I+ +C+V+ MD A + +EM ++PN++T+N ++ G
Sbjct: 535 SSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 594
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+EL V + + G + + T+N ++ LC+ + ++AL + + T T+
Sbjct: 595 RRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 654
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI+I +L +G + LF ++ + P+ +T+ + ++ +E+ ++ FFSM
Sbjct: 655 NIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMED 714
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM-EQNGCNPDSYTSNLILETLVQQGRFE 482
G D+ + +++ L++ G A T+LSM ++ + ++ T++L ++ L+ G+++
Sbjct: 715 NGCTVDSGMLNFIVRELLQRGEITRAG-TYLSMIDEKHFSLEASTASLFID-LLSGGKYQ 772
Query: 483 EAH 485
E H
Sbjct: 773 EYH 775
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 164/347 (47%), Gaps = 9/347 (2%)
Query: 160 LSNNSMASEAAAILR-----KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
L++ + S AAA+ R + G P T+ + C L+ L +K+
Sbjct: 57 LADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKK 116
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G + T+ L++ L R + D L + + + +V S +++ C N
Sbjct: 117 GFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQE 176
Query: 274 ATEICREM---RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
A E+ M R AP++V++ T+I+G K+ + K +L+ PD T++S
Sbjct: 177 ALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSS 236
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I LC+ + A++ L+ MV+ GV PN +TYN ++ C+ ++ +KM++D
Sbjct: 237 IIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDG 296
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ PD+ T+N+L+ C+ + +A K F SM GL PD +Y L++ G E
Sbjct: 297 VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMH 356
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M +NG +PD + N+++ +Q + +EA + ++ G++
Sbjct: 357 ALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLN 403
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 35/231 (15%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ Y+ +ID + +D A M KPD TYN LI+G CR+ +D+
Sbjct: 505 IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDD 564
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L K+M G +PN+ TY I++ G + +R A
Sbjct: 565 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA-------------------------- 598
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
A EL + + + N +L+ L N++ EA + + +
Sbjct: 599 ---------AAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 649
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
E+ TF+ + L+ +E + F G+ P + TY L+ E + G
Sbjct: 650 ETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG 700
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 235/491 (47%), Gaps = 8/491 (1%)
Query: 6 ISPST--RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+SP+T LY A I A ++ + A F++M + C P YN ++ + D+
Sbjct: 44 LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 103
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ +M G +P+++T+TI + FC R R+L + R ++V
Sbjct: 104 AHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVC 159
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G++ H A +L + + N +L+ L EA +L K+ RG
Sbjct: 160 GLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSI 219
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + L L E ++D V P TY L+ L K E YL
Sbjct: 220 NLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYL 278
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + +YN +ID +CK++M+ ATE+ ++ + P+ VT+ +LI+G C +
Sbjct: 279 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 338
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V + EL G KPD +NS++ LC AL ++EM E G P+ TY
Sbjct: 339 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 398
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI+I LC +G+++ + + PD++TFN LI +C+ K++ A + M
Sbjct: 399 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 458
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ PD +Y++++ L K+G+ +E +TF M GC+P+ T N+++E + + EE
Sbjct: 459 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 518
Query: 484 AHD-IVKTSKE 493
A IVK S+E
Sbjct: 519 ASKVIVKMSQE 529
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 231/499 (46%), Gaps = 36/499 (7%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F QM P+ +N ++H +C+ G V EA L+ ++ G + N++TY I I G C
Sbjct: 174 FDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCE 233
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
A R+ E R+++ M+ V P+ T +L+ G+ + P +A L R M + L
Sbjct: 234 AGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 292
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
NT++ SM EA +L+ +G++P+ T+ + L D+ + +
Sbjct: 293 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 352
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+G+KP Y L++ L G + + +N + ++ ++ +YN+VI+ CK+ +
Sbjct: 353 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNIS 412
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
AT + + + P++ TFNTLI G+CK ++ +L+ + E G PD T+NS++
Sbjct: 413 DATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVL 472
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
+ LC+A + + + EM+ G PN ITYNILI + C + + ++ KM + +
Sbjct: 473 NGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLH 532
Query: 393 PDIYTFNALIQSFCRMNKIEK-----------------------------------AEKA 417
PD +FN LI FCR +E AEK
Sbjct: 533 PDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKI 592
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F ML+ G R D+++Y LI K+ D A + M + G P T ++ +L
Sbjct: 593 FDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTV 652
Query: 478 QGRFEEAHDIVKTSKERGI 496
R +A I+ + G+
Sbjct: 653 NHRVFQAVGIIHIMVKIGV 671
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 194/427 (45%), Gaps = 10/427 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN +I L K + A ++M C PD FTYN +I G C+I +V EA L
Sbjct: 253 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 312
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV-F 126
+K G+ P+ TY LI+G C V + + + + P+ SLV G+
Sbjct: 313 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 372
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ L H A +++ E N ++ L S+A ++ +GYLP+
Sbjct: 373 QGLILH-ALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVF 431
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
TF+ + L L+ +++ + G+ P TY ++ L KAG+ E +N
Sbjct: 432 TFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNE----VNET 487
Query: 247 FKDRLVS----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
F++ ++ N +YN++I+ FC+ N M+ A+++ +M + P+ V+FNTLI G C+
Sbjct: 488 FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCR 547
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ ++ L L E G+ TFN++I A EM+ G ++ T
Sbjct: 548 NGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYT 607
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y +LI C +V R+ +M P + TF +I S +++ +A M+
Sbjct: 608 YRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMV 667
Query: 423 TLGLRPD 429
+G+ P+
Sbjct: 668 KIGVVPE 674
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 197/422 (46%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
PD TYN LI G+C+ + EA+ +++M G P+ +TY +IDG+C V E +
Sbjct: 253 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 312
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
L+ + P++ T SL++G+ D +A EL + +V N+L+ L
Sbjct: 313 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 372
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+ A ++ +M + G P+ T++ + L ++++ +++ I +G P T
Sbjct: 373 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 432
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
+ L++ K + + + +++ + + +YN V++ CK ++ E +EM
Sbjct: 433 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 492
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+ PN +T+N LI C+ ++ + +++V + + G PD +FN++I CR E
Sbjct: 493 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 552
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
A ++ E G T+N LI + ++ + ++F +M + D YT+ LI
Sbjct: 553 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 612
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
C+ +++A M+ G P ++ +I +L + R +A M + G
Sbjct: 613 DGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVV 672
Query: 463 PD 464
P+
Sbjct: 673 PE 674
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 172/391 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN +ID K + + A + PD+ TY LI+G+C G V+ A
Sbjct: 285 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 344
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L + + G P++ Y L+ G C + +V+ M E P+ T +++G
Sbjct: 345 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 404
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + A ++ + + L NTL+ A ++ +M + G P+
Sbjct: 405 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 464
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + L +NE I +G P TY +L+E ++ + E + +
Sbjct: 465 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 524
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ L + S+N +I FC+ ++ A + +++ ++ + TFNTLI
Sbjct: 525 KMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKL 584
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+H ++ +L G + D +T+ +ID C+ + A L EM++ G P+ T+
Sbjct: 585 NMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFG 644
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
+I SL V +++ + M + P++
Sbjct: 645 RVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 675
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 159/360 (44%), Gaps = 2/360 (0%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G P Y ++I+ L ++ A F + KPD YN L+ G+C G++
Sbjct: 318 FKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLIL 377
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
AL+++ +M G P++ TY I+I+G C +++ V+ + P+ T +L+
Sbjct: 378 HALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 437
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G + L A +L+ R E + N++L L +E ++M +G
Sbjct: 438 DGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCH 497
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T++ + + E ++ + G+ P ++ L+ + G D+EG
Sbjct: 498 PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNG-DLEGAYL 556
Query: 243 LNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L +++ S +++N +I F M A +I EM + + T+ LI G C
Sbjct: 557 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC 616
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K A V + LV +++ GF P TF +I+ L HR A+ + MV+ GV P +
Sbjct: 617 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 676
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/496 (26%), Positives = 230/496 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ Y VID L K+ +D A FQQM KPD TYN LIHG IG E
Sbjct: 233 GIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEV 292
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+R++++M G P+ YTY L++ CN R E + + M + + PN A L+HG
Sbjct: 293 VRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHG 352
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +LL +E + N + + +M EA I KM +G P+
Sbjct: 353 YATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPD 412
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + L +++ + + GV P + L+ L + + +
Sbjct: 413 VVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYF 472
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +V +N ++ C + +A + M P ++++ TLI GHC
Sbjct: 473 EMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVG 532
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + L ++L G KPD++T+N+++ CRA R +DA EM+ G+ P +TY+
Sbjct: 533 RIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYS 592
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++ L + + L+ M +I+ +N ++ + N +++A K F S+ +
Sbjct: 593 TILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ + +++ +I AL KSGR ++A F ++ G PD +T LI E L+++G EE
Sbjct: 653 DFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEF 712
Query: 485 HDIVKTSKERGISFKS 500
D+ ++ G + S
Sbjct: 713 DDLFSAMEKSGTTPNS 728
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/521 (25%), Positives = 242/521 (46%), Gaps = 39/521 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P Y+ +I + ++ + F + + + N L+ G+C + EA+
Sbjct: 90 VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149
Query: 66 R-LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE---RNVCPNEATVRSL 121
LVK+M LG P+V +Y L+ GFCN KR E +L +M + R+ PN + +
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++G F KA+ L + M+R + T++ L + A + ++M D+G
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269
Query: 182 LPESSTFDYTV--------------------------TCLVTGLDLNETCG--------- 206
P++ T++ + C G LN C
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+ D+ I++G+KP + Y +L+ G E LN + ++ L + + +N++ +
Sbjct: 330 LFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K M+D A I +M+ + ++P++V + LI CK V ++ G P+ F
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIF 449
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
FNS++ LC ++E A + EM+ G+ P+ + +N ++ +LC G V ++ RL M
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLM 509
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ P + ++ LI C + +I++A K+ ML++GL+PD ++Y+ L+ ++GR
Sbjct: 510 ERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRI 569
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
D+A F M +NG P T + IL L RF EA ++
Sbjct: 570 DDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKEL 610
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 230/506 (45%), Gaps = 11/506 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ---CKPDRFTYNILIHGICRIGV 60
LG +P YN ++ + A M+ Q C P+ +Y I+I+G G
Sbjct: 159 LGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQ 218
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD+A L +M G PNV TYT +IDG C A+ V V + M ++ V P+ T
Sbjct: 219 VDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNC 278
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT---LLYRLSNNSMASEAAAILRKMG 177
L+HG L K E++ E K C T LL L NN EA + M
Sbjct: 279 LIHGY---LSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMI 335
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
+G P + + + T L+E +L+ ++ G+ P + ++ A K
Sbjct: 336 RKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMID 395
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E N + + L +V +Y +ID CK+ +D A +M + +APN+ FN+L+
Sbjct: 396 EAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLV 455
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G C + K +E +L G +PD FN+++ LC + A + M G
Sbjct: 456 YGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTR 515
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P I+Y LI C +G + + + M + + PD +T+N L+ +CR +I+ A
Sbjct: 516 PGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGV 575
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F ML G+ P +YS ++ L + RF EAK+ +L+M +G + + N+IL L +
Sbjct: 576 FREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSK 635
Query: 478 QGRFEEAHDIVKT--SKERGISFKSF 501
+EA + ++ SK+ + +F
Sbjct: 636 NNCVDEAFKLFQSLCSKDFQLEITTF 661
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 171/407 (42%), Gaps = 8/407 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP ++N + A K ID A F +M PD Y LI +C++G VD+A
Sbjct: 373 GLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDA 432
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ QM G APN++ + L+ G C + + M + + P+ +++
Sbjct: 433 VLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCN 492
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS---EAAAILRKMGDRGY 181
+ KA + LI MER ++ T L + + + EAA L M G
Sbjct: 493 LCTKGQVMKA-QRLIDLMERVGTRPGVISYTTL--IGGHCLVGRIDEAAKSLDVMLSVGL 549
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG-D 240
P+ T++ + +++ G+ ++ G+ P TY ++ L+ R E +
Sbjct: 550 KPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKE 609
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
YLN + + N+ YN++++ K N +D A ++ + + +D + TFN +I
Sbjct: 610 LYLNMITSGK-QWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGAL 668
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K L + G PD FT+ + + L E+ D S M + G PN+
Sbjct: 669 FKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNS 728
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
N L+R L GD+ R+ K+ S + T LI R
Sbjct: 729 RMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSR 775
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 108/250 (43%), Gaps = 39/250 (15%)
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
+ P+ T++ LI C+ + ++L+ G++ + N ++ LC A R +A+
Sbjct: 90 VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149
Query: 346 DCL-SEMVEWGVPPNTITYNILIRSLC------------------------------AI- 373
D L M E G P+ ++YN L++ C AI
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209
Query: 374 -------GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
G V ++ LF +M I P++ T+ +I C+ +++AE F M+ G+
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+PDN +Y+ LI + G++ E + M +G PD YT +L L GR EA
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329
Query: 487 IVKTSKERGI 496
+ + +GI
Sbjct: 330 LFDSMIRKGI 339
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 125/308 (40%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +N ++ L + A M +P +Y LI G C +G +DEA
Sbjct: 478 GIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEA 537
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + M +G P+ +TY L+ G+C A R+ + + V M + P T +++HG
Sbjct: 538 AKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHG 597
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F +A EL + + + N +L LS N+ EA + + + + + E
Sbjct: 598 LFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLE 657
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+TF+ + L + + T G+ P TY L+ E L + G E D +
Sbjct: 658 ITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFS 717
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K N N ++ + RA ++ +++ + T LIS +D
Sbjct: 718 AMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDE 777
Query: 305 EVHKTREL 312
H L
Sbjct: 778 YHHHATSL 785
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 11/159 (6%)
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS-------LRLFQKMQAD---R 390
+DAL ++ P + I +N L+ ++ + S + LF +M + +
Sbjct: 30 LDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
++PD T++ LI FCRM ++E F +L G R +N + L+K L + R EA
Sbjct: 90 VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149
Query: 451 QTFLS-MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+ M + GC PD + N +L+ + R EEA +++
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELL 188
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 76/171 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G + +YN +++ L K+N +D A+ FQ + + + T+NI+I + + G ++A
Sbjct: 618 GKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDA 677
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L + G P+V+TY ++ + + E + M++ PN + +LV
Sbjct: 678 MHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRR 737
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
+ D +A L + E+ + L+ LS + A ++ K
Sbjct: 738 LLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEK 788
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P YN ++ ++ ID AY F++M + P TY+ ++HG+ E
Sbjct: 547 VGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSE 606
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L M G N++ Y I+++G V E F++ + + ++ T ++
Sbjct: 607 AKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIG 666
Query: 124 GVFR 127
+F+
Sbjct: 667 ALFK 670
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 240/495 (48%), Gaps = 1/495 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P + ++ +LVK +QM PD T +ILI+ C +G + + +
Sbjct: 8 PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ LGY PN L+ G C V + + + + ++ + L++G+ +
Sbjct: 68 LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ A +LL +R ++ +T++ L + + EA + +M RG P+ T
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + L E G+L+ I + + P TY L++ L K G+ E L +
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K + +V Y++++D +C V + +A +I M + P++ ++N +I+G CK V
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ LL +L PD T++S+ID LC+ R LD EM G P N +TYN L+
Sbjct: 308 EAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLL 367
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC ++ +++ LF KM+ I P+ YT+ ALI C+ +++K + F +L G
Sbjct: 368 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYC 427
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
D ++Y+ +I L K G FDEA ME NGC P++ T +I+ +L+++ ++A +
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKL 487
Query: 488 VKTSKERG-ISFKSF 501
+ +G + F++F
Sbjct: 488 LHEMIAKGLLPFRNF 502
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 143/319 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P Y +I + + A+ +M + P+ +TYN LI +C+ G V E+
Sbjct: 180 GIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKES 239
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G P+V Y+IL+DG+C V + ++ +M + V P+ + +++G
Sbjct: 240 KNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIING 299
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A LL + + + + ++L+ L + + ++M RG
Sbjct: 300 LCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPAN 359
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L +L++ + +RG++P TY L++ L K GR +G
Sbjct: 360 LVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQ 419
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
H+ +V +Y ++I CK M D A + +M D PN VTF +I +
Sbjct: 420 HLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKD 479
Query: 305 EVHKTRELLVMLLECGFKP 323
E K +LL ++ G P
Sbjct: 480 ENDKAEKLLHEMIAKGLLP 498
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 124/247 (50%)
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
R + + + ++ K+ + ++M + I P+LVT + LI+ C ++ +
Sbjct: 5 RHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFS 64
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+L +L+ G++P+ N+++ LC + +L ++V G + ++Y IL+
Sbjct: 65 FSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNG 124
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
LC IG+ +++L + ++ PD+ ++ +I C+ +++A + M G+ PD
Sbjct: 125 LCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPD 184
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y+ LI +G+ EA M NP+ YT N +++TL ++G+ +E+ +++
Sbjct: 185 VITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLA 244
Query: 490 TSKERGI 496
++G+
Sbjct: 245 VMTKKGV 251
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/514 (26%), Positives = 237/514 (46%), Gaps = 40/514 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P ++N +I L K + D A F+ M + KP+ TYN +I G+C+ G +++A
Sbjct: 93 VAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKAR 152
Query: 66 RLVKQM--EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L+++M +G AP++ TY LI+ F A R+ E E MK + P+ T LV
Sbjct: 153 ELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVS 212
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + D +A E+L P+ + N++++ L EAA IL+ M P
Sbjct: 213 GICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCS---P 269
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF+ + L +L+ + + P TY +L+ L + G+ L
Sbjct: 270 DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLL 329
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + +V +Y ++D CK ++ A ++ +EM R +V +++L+SG+C+
Sbjct: 330 EEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRA 389
Query: 304 AEVHKTRELLVMLLEC-----------------------------------GFKPDKFTF 328
VHK RE+L ++ G+ PD T+
Sbjct: 390 GNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTY 449
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N++ID LC+A+R +A D EM G PN +T ++ LC +G V + L +M
Sbjct: 450 NTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSR 509
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
R +P++ + +LI C+ ++++ A +M G+ D+F+Y LI ++ GR E
Sbjct: 510 KRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAE 569
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
A + M G PD TS + E + FE
Sbjct: 570 AMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFE 603
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/526 (24%), Positives = 237/526 (45%), Gaps = 40/526 (7%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN ++D LVKS ++ + C P+ T+ ILI G C+ G AL ++ ++
Sbjct: 30 YNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALD 89
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
AP+VY + +LI G + ++ E M+ V P T +++ G+ + +
Sbjct: 90 EFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLE 149
Query: 133 KAFELLIRFMER--EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
KA ELL + + + + NTL+ S EA A KM G P+ T +
Sbjct: 150 KARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNI 209
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
V+ + D+ E ILD G P TY ++ AL AG+ VE L +
Sbjct: 210 LVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---S 266
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
++ ++N ++D FCK M+ RA E+ EM +I P+++T+ L++G C+ +V
Sbjct: 267 CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAF 326
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA-------------------------- 344
LL ++ G+ PD + S++D LC++ E+A
Sbjct: 327 YLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGY 386
Query: 345 ---------LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
+ L+EMV + P TYNI++ L G +++++ L + A PD+
Sbjct: 387 CRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDV 446
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
T+N LI C+ N++ +A M + G P++ + +++ L + GR D+A +
Sbjct: 447 VTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVE 506
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
M + P+ +++ L + R ++A ++ + +G++ F
Sbjct: 507 MSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDF 552
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 219/478 (45%), Gaps = 8/478 (1%)
Query: 22 KSNSIDLAYLKFQQMS-VDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNV 80
+S+ DLA F D K D +YN L+ + + G ++ K + G +PN+
Sbjct: 3 RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNL 62
Query: 81 YTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIR 140
T+ ILI G C A + L + E +V P+ L+HG+F+ +P +A +L
Sbjct: 63 VTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLF-E 121
Query: 141 FMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRG--YLPESSTFDYTVTCLVT 197
ME + ++V NT++ L + +A +L +M +G P+ T++ +
Sbjct: 122 NMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYR 181
Query: 198 GLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNS 257
+ E C + G+ P T +L+ + K G E L+ + V +V +
Sbjct: 182 ASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVIT 241
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
YN +I C + A EI + M +P+LVTFNTL+ G CK + + E+L +
Sbjct: 242 YNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMC 298
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
PD T+ +++ LCR + + A L E+V G P+ I Y L+ LC G++
Sbjct: 299 RENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIE 358
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+ +L ++M + +++L+ +CR + KA + M+++ + P F+Y+ ++
Sbjct: 359 EAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVL 418
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
LIK G +A + G PD T N +++ L + R EA D+ RG
Sbjct: 419 GGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRG 476
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 109/260 (41%), Gaps = 35/260 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCK---------------------- 42
G P Y +++D L KS I+ A+ ++MSV C+
Sbjct: 336 GYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKA 395
Query: 43 -------------PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDG 89
P FTYNI++ G+ + G + +A+ L+ + GY P+V TY LIDG
Sbjct: 396 REILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDG 455
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C A RV E + + M R PN+ T+ S+V G+ R A+ L++ +
Sbjct: 456 LCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPN 515
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+V +L+ L + +A +L M +G + + + + G + E + D
Sbjct: 516 VVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYD 575
Query: 210 TFIKRGVKPRFSTYLLLMEA 229
+ RG P ST L EA
Sbjct: 576 EMVARGFLPDGSTSKTLEEA 595
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 232/484 (47%), Gaps = 3/484 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y +I + +D+A ++M + + + + L+ G+C G V EAL
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ M AP+V TYT L+ C A + E +L M R P+ T +L+ G+ +
Sbjct: 67 FRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE-AAAILRKMGDRGYLPESS 186
+AF +L ++R T++ RL N + E A+ +L + +G+ P
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
F+ + DL+ +L+ I++G P T+ +L+ L KA R E + L +
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
NV +Y+ VI+ CK +D A E+ + M R+ PN+VT N LI G CK +
Sbjct: 246 VTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRI 305
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV-PPNTITYNI 365
+ R+L + E G PD T+NS+ID LC++ + ++A + E GV N +TY+
Sbjct: 306 EEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYST 365
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L A+G +A + R+F + SPD+ T+ +LI +C+ ++ + + M + G
Sbjct: 366 LFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKG 425
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
P + SA++ L + + A Q F SM GC D+ NL++E + + + +A
Sbjct: 426 FPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKAL 485
Query: 486 DIVK 489
+++
Sbjct: 486 AVLE 489
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 222/474 (46%), Gaps = 10/474 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P+ ++N VI+ K+ +D AY + M C P+ FT+ ILI G+C+ V EA
Sbjct: 179 GFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEA 238
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L+++M G +PNV TY+ +I+G C +V + + + ++M+ RN PN T L+ G
Sbjct: 239 QQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDG 298
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A +L R E + N+L+ L + EA + + + + G
Sbjct: 299 LCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGV--- 355
Query: 185 SSTFDYTVTCLVTGLD----LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
S+ T + L G + + C I + +G P +TY L+ K R VE
Sbjct: 356 SAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVV 415
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + VN+ + V+ + N +RA ++ M R + + +N ++ G
Sbjct: 416 ELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGM 475
Query: 301 CKDAEVHKTRELLVMLLEC---GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
+ ++ +K +L +++ F P +++++ LC+ R +DA L +M E G
Sbjct: 476 ARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFA 535
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
+YN L+ L + + ++F+ M + +P+I T N +I C K++ A +
Sbjct: 536 AAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYEL 595
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
M LG PD + + LI KSGR D A++ M + G P+ T +L+
Sbjct: 596 VQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 196/422 (46%), Gaps = 38/422 (9%)
Query: 78 PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFEL 137
PN +TY ILI GF +A + ++LE MK N +L+ G+ D + E
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGL---CDAGRVVEA 63
Query: 138 LIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVT 197
L F +MA + A P+ T+ V L
Sbjct: 64 LEHF---------------------RAMAKDCA------------PDVMTYTALVHALCK 90
Query: 198 GLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNS 257
+E G+L I RG P T+ L++ L K G + + R L V + + ++ +
Sbjct: 91 AGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAA 150
Query: 258 YNMVIDCFC-KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+ +I C K N ++ A+++ + + P ++ FN +I+G CK ++ +LL ++
Sbjct: 151 FETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVM 210
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
+E G P+ FTF +I LC+A+R +A L +MV G PN +TY+ +I LC G V
Sbjct: 211 IEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQV 270
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+ LFQ M+ P++ T N LI C+ +IE+A + + M G PD +Y++L
Sbjct: 271 DDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSL 330
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCN-PDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
I L KS + DEA Q F ++ ++G + ++ T + + GR +A I ++G
Sbjct: 331 IDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKG 390
Query: 496 IS 497
S
Sbjct: 391 FS 392
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 226/498 (45%), Gaps = 7/498 (1%)
Query: 5 GISPSTRLYNAVIDALV-KSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G+ S + +I L K NS++LA + P +N++I+G C+ +D
Sbjct: 143 GMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDS 202
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +L++ M G PNV+T+TILI G C A RV E ++LE M PN T ++++
Sbjct: 203 AYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVIN 262
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + A+EL + MER +V N L+ L EA + +M + G
Sbjct: 263 GLCKQGQVDDAYELF-QLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCA 321
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS-TYLLLMEALYKAGRDVEGDR 241
P+ T++ + L ++E + T + GV + TY L GR + R
Sbjct: 322 PDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACR 381
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + ++ +Y +I +CK + E+ EM + P + T + ++ G
Sbjct: 382 IFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLF 441
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW---GVPP 358
+ + +L + G D +N +++ + RA + AL L ++++ P
Sbjct: 442 EGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNP 501
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
++ + L+ SLC +G + +L KM + + ++N L+ R+ + ++A + F
Sbjct: 502 SSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVF 561
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+M++ G P+ + + +I L + + D+A + M + GC PD T N ++ +
Sbjct: 562 EAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKS 621
Query: 479 GRFEEAHDIVKTSKERGI 496
GR + A +++ E G+
Sbjct: 622 GRADLARKLLEEMTEAGL 639
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/530 (23%), Positives = 231/530 (43%), Gaps = 42/530 (7%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P Y A++ AL K+ D A ++M C PD T++ LI G+C+ G ++A R
Sbjct: 75 APDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFR 134
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF-RVLEIMKERNVCPNEATVRSLVHGV 125
+++ + G + + +I CN E+ +VL ++ + P +++G
Sbjct: 135 VLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGF 194
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ D A++LL +E+ + L+ L + EA +L KM G P
Sbjct: 195 CKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNV 254
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + L +++ + +R P T+ +L++ L KA R +E R L H
Sbjct: 255 VTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR-IEEARQLYH 313
Query: 246 VFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI-APNLVTFNTLISGHCKD 303
++ ++ +YN +ID CK +D A ++ + + + + A N VT++TL G+
Sbjct: 314 RMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAAL 373
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + ML++ GF PD T+ S+I C+ R + ++ + EM G PP T
Sbjct: 374 GRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTL 433
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN------------------------ 399
+ ++ L R+++LF M A + D +N
Sbjct: 434 SAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVID 493
Query: 400 --------------ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
AL++S C++ + + A++ M G SY+ L+ L + R
Sbjct: 494 KRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQR 553
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+DEA Q F +M G P+ T N+++ L + ++A+++V+ + G
Sbjct: 554 WDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLG 603
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 129/497 (25%), Positives = 232/497 (46%), Gaps = 6/497 (1%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ Y VID L K+ +D A FQ M +P+ TY LIHG G E ++
Sbjct: 199 TPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQ 258
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++++M G P+ Y +L+D C R E + + + + + P+ L+HG
Sbjct: 259 MLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYA 318
Query: 127 R---CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ H +L++R + N + + +M EA I KM + P
Sbjct: 319 TEGALSEMHSFLDLMVR---NGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSP 375
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ + L +++ + I GV P + L+ L + + ++
Sbjct: 376 GVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLF 435
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
V + N +N+++ C+ + A + M D+ P+++++NTL+ GHC
Sbjct: 436 FEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLT 495
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + +LL +++ G KPD+FT+N+++ C+A R +DA EM+ G+ P +TY
Sbjct: 496 GRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTY 555
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N ++ L IG + L+ M +R DIYT+ ++ CR N +++A K F S+ +
Sbjct: 556 NTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCS 615
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
L+ D F+ + +I AL+K GR ++A F ++ G PD T LI E L+++G EE
Sbjct: 616 KDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEE 675
Query: 484 AHDIVKTSKERGISFKS 500
++ +E G + S
Sbjct: 676 LDELFSAMEENGTAPNS 692
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 221/483 (45%), Gaps = 39/483 (8%)
Query: 9 STRLYNAVIDALVKSNSIDLAY-LKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
+T ++ ++ L + +D A + ++M C + +YNIL+ G+C +EAL L
Sbjct: 127 NTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALEL 186
Query: 68 VKQMEGLG---YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M G + PNV TYT +IDG C A+ V V + M ++ V PN T L+HG
Sbjct: 187 MHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHG 246
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ E +L++M G P+
Sbjct: 247 YL-----------------------------------STGKWKEVVQMLQEMSTHGLQPD 271
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + L E I D+ I++G+KP + Y +L+ G E +L+
Sbjct: 272 CVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLD 331
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ + + + +N++ + + K M+D A I +MR + ++P +V + LI CK
Sbjct: 332 LMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLG 391
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V ++ G PD F F+S++ LC ++E A E+++ G+ N +N
Sbjct: 392 RVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFN 451
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
IL+ +LC G V + RL M + PD+ ++N L+ C +I++A K M+++
Sbjct: 452 ILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSI 511
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL+PD F+Y+ L+ K+ R D+A F M G P T N IL L Q GRF EA
Sbjct: 512 GLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEA 571
Query: 485 HDI 487
++
Sbjct: 572 KEL 574
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/503 (21%), Positives = 221/503 (43%), Gaps = 41/503 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P +Y ++D L K+ A F + KP Y IL+HG G
Sbjct: 263 MSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGA 322
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ E + M G +P+ + + I+ + + + E + + M+++ + P +
Sbjct: 323 LSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGA 382
Query: 121 LVHGVFRCLDPHKAFELLIRF--MEREPLTQKL-VCNTLLYRLSNNSMASEAAAILRKMG 177
L+ + + + + +++F M E +T + V ++L+Y L +A + ++
Sbjct: 383 LIDALCKL---GRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVL 439
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
D+G ++ F+ + L + E ++D ++ V+P +Y L++ GR
Sbjct: 440 DQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRID 499
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E + L+ + L + +YN ++ +CK +D A + REM + + P +VT+NT++
Sbjct: 500 EAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTIL 559
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G + + +EL + ++ K D +T+ +++ LCR + ++A
Sbjct: 560 HGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEA------------- 606
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
++FQ + + + DI+T N +I + + + E A
Sbjct: 607 ----------------------FKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDL 644
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F ++ GL PD +Y + + LIK G +E + F +ME+NG P+S N ++ L+
Sbjct: 645 FATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLH 704
Query: 478 QGRFEEAHDIVKTSKERGISFKS 500
+G A + E+ S ++
Sbjct: 705 RGDIGRAGVYLSKLDEKNFSLEA 727
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 181/428 (42%), Gaps = 39/428 (9%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+SP Y A+IDAL K +D A LKF QM + PD F ++ L++G+C + ++A
Sbjct: 373 LSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAE 432
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+L ++ G N + IL+ C RV E R++++M +V P+ + +LV G
Sbjct: 433 KLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDG- 491
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
CL EAA +L M G P+
Sbjct: 492 -HCL---------------------------------TGRIDEAAKLLDVMVSIGLKPDE 517
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + +++ + + +G+ P TY ++ L++ GR E +
Sbjct: 518 FTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLN 577
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ +R ++ +Y ++++ C+ N +D A ++ + + +D+ ++ T N +I K
Sbjct: 578 MINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGR 637
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+L + G PD T+ + + L + E+ + S M E G PN+ N
Sbjct: 638 KEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNA 697
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA----EKAFFSM 421
L+R L GD+ R+ K+ S + T + LI + R + A EK F
Sbjct: 698 LVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSRAEYQQLAKSLPEKYRFPQ 757
Query: 422 LTLGLRPD 429
+L L D
Sbjct: 758 RSLQLSVD 765
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 125/294 (42%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + +N ++ L + + A M +PD +YN L+ G C G +DEA
Sbjct: 442 GIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEA 501
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L+ M +G P+ +TY L+ G+C A+R+ + + + M + + P T +++HG
Sbjct: 502 AKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHG 561
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F+ +A EL + + +L L N+ EA + + + + +
Sbjct: 562 LFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLD 621
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T + + L+ G + + T G+ P TY L+ E L K G E D +
Sbjct: 622 IFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFS 681
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ ++ N N ++ + RA ++ +++ + T + LIS
Sbjct: 682 AMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLIS 735
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 10/235 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P YN ++ K+ ID AY F++M + P TYN ++HG+ +IG E
Sbjct: 511 IGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCE 570
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L M ++YTYTI+++G C V E F++ + + +++ + T+ ++
Sbjct: 571 AKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIG 630
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA-----AILRKMGD 178
+ + A +L LV + YRL ++ E + + M +
Sbjct: 631 ALLKGGRKEDAMDLFATIS-----AYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEE 685
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
G P S + V L+ D+ L ++ ST +L+ +A
Sbjct: 686 NGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSRA 740
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 10/164 (6%)
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILI----RSLCAIGDVARSLRLFQKMQAD---RISP 393
+DAL EM+ + P + T+N L+ R+ C+ + LF +M + +++P
Sbjct: 32 LDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSAS-ELVVSLFNRMIRECSVKVAP 90
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN-FSYSALIKALIKSGRFDEAKQT 452
T+ LI FCRM +++ AF +L G +N + L+K L + R DEA
Sbjct: 91 SSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDI 150
Query: 453 FL-SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
L M + GC + + N++L+ L + R EEA +++ + G
Sbjct: 151 LLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDG 194
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 234/492 (47%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ +T +N +I N + A +M C PD +YN ++ +C+ G ++E
Sbjct: 206 LGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNE 265
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+ M+ G PN T+ IL+ G+C + E +V+++M + NV P+ T L+
Sbjct: 266 ARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIG 325
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +AF L + L + NTL+ + S + + ++ KM +G P
Sbjct: 326 GLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKP 385
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ V V ++ L + G P T+ L+ KAGR E R +
Sbjct: 386 NAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMM 445
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + L N + N ++ C +D A ++ R + V++ TLI G+ KD
Sbjct: 446 DEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKD 505
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + +L + E P T+N+MI LC + + + ++D L+E++E G+ P+ TY
Sbjct: 506 GKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTY 565
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N +I C G V ++ + KM PD++T N L++ C ++KA K F + ++
Sbjct: 566 NTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWIS 625
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G D +Y+ +I L K RF+EA ME+ PD YT N IL L GR +E
Sbjct: 626 KGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKE 685
Query: 484 AHDIVKTSKERG 495
A + + E+G
Sbjct: 686 AEEFMSRIVEQG 697
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/526 (23%), Positives = 237/526 (45%), Gaps = 47/526 (8%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN ++D L K ++ A M + P+R T+NIL+ G C++G + EA ++
Sbjct: 245 PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQV 304
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ M P+V+TY +LI G C ++ E FR+ + M+ + P+ T +L++G F
Sbjct: 305 IDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFD 364
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
C K FEL+ + + + N ++ A LRKM + G+ P+ T
Sbjct: 365 CSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVT 424
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST------------------------- 222
F+ + L+E ++D ++G+K T
Sbjct: 425 FNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSAS 484
Query: 223 ----------YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
Y L+ +K G+ VE + + + + ++ ++ +YN +I C D
Sbjct: 485 KRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTD 544
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
++ + E+ + + P+ T+NT+I G+C++ +V K + +++ FKPD FT N ++
Sbjct: 545 QSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILL 604
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
LC + AL + + G + +TYN +I LC + L +M+ ++
Sbjct: 605 RGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLG 664
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PD YT+NA++ + ++++AE+ ++ G D ++ ++ K
Sbjct: 665 PDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQD------------QTISLNKRKIE 712
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
S +P+S T + + L QG++++A +V+ S ++GI+
Sbjct: 713 SSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITL 758
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 202/430 (46%), Gaps = 23/430 (5%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L + P YN +I+ +S + +M KP+ TYN+++ + G +D
Sbjct: 346 LKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDN 405
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +++ME G++P+ T+ LI+G+C A R++E FR+++ M + + N T+ +++H
Sbjct: 406 AGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILH 465
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ A++LL +R ++ TL+ + + EA + +M ++ +P
Sbjct: 466 TLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIP 525
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + L +++ L+ ++ G+ P +TY ++ + G+ + ++
Sbjct: 526 SIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFH 585
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + K ++ + N+++ C M+D+A ++ + A + VT+NT+ISG CK+
Sbjct: 586 NKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKE 645
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG-------- 355
+ +LL + E PD +T+N+++ L A R ++A + +S +VE G
Sbjct: 646 DRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTIS 705
Query: 356 ---------------VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
PN++T++ I LC G ++ + Q+ I+ T+ +
Sbjct: 706 LNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYIS 765
Query: 401 LIQSFCRMNK 410
L++ + K
Sbjct: 766 LMEGLIKRRK 775
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 190/413 (46%), Gaps = 3/413 (0%)
Query: 87 IDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREP 146
I + R ++ MK ++ PN T +L++ + R + F +
Sbjct: 146 IGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIK 205
Query: 147 LTQKLVCNT---LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
L K+ NT L+Y + SEA ++ KM D P++ +++ + L LNE
Sbjct: 206 LGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNE 265
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
+L G+ P +T+ +L+ K G E + ++ + ++ ++ +V +YNM+I
Sbjct: 266 ARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIG 325
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
CK +D A + EM + + P++VT+NTLI+G + K EL+ + G KP
Sbjct: 326 GLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKP 385
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
+ T+N ++ + + ++A + L +M E G P+ +T+N LI C G ++ + R+
Sbjct: 386 NAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMM 445
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+M + + T N ++ + C K++ A K S G D SY LI K
Sbjct: 446 DEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKD 505
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G+ EA + + M++ P T N ++ L G+ +++ D + E G+
Sbjct: 506 GKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGL 558
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 128/247 (51%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
N N++N++I C N + A + +M+D P+ V++NT++ CK ++++ R+LL
Sbjct: 211 NTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLL 270
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ + G P++ TFN ++ C+ ++A + M + V P+ TYN+LI LC
Sbjct: 271 LDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKD 330
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G + + RL +M+ ++ PD+ T+N LI + K + M G++P+ +Y
Sbjct: 331 GKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTY 390
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ ++K +K G+ D A ME++G +PD T N ++ + GR EA ++
Sbjct: 391 NVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSR 450
Query: 494 RGISFKS 500
+G+ S
Sbjct: 451 KGLKMNS 457
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 105/233 (45%), Gaps = 12/233 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN +I + ++ A+ +M KPD FT NIL+ G+C G++D+A
Sbjct: 557 GLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKA 616
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L G A + TY +I G C R E F +L M+E+ + P+ T +++
Sbjct: 617 LKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSA 676
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A E + R +E+ L + + S N E+++ + D P
Sbjct: 677 LADAGRMKEAEEFMSRIVEQGKLQDQTI--------SLNKRKIESSSETSQESD----PN 724
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
S TF + L T + ++ ++G+ STY+ LME L K + +
Sbjct: 725 SVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKRRKSI 777
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 238/484 (49%), Gaps = 2/484 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDL--AYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
PS +N ++ A+ K DL + +M +P T + L++G C + +A+
Sbjct: 40 PSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 99
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
LV QM +GY P+ T+T LI G + +E +++ M +R PN T +V+G+
Sbjct: 100 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 159
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ D AF LL + + ++ NT++ L +A + ++M +G P
Sbjct: 160 CKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 219
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ ++CL + ++ +L I++ + P T+ L++A K G+ VE ++ +
Sbjct: 220 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 279
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ K + ++ +YN +I+ FC + +D+A ++ M +D P+L T+NTLI G CK
Sbjct: 280 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 339
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V EL + G D T+ ++I L ++A +MV GVPP+ +TY+I
Sbjct: 340 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 399
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L+ LC G + ++L +F MQ I DIY + +I+ C+ K++ F S+ G
Sbjct: 400 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 459
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
++P+ +Y+ +I L EA M+++G PDS T N ++ ++ G +
Sbjct: 460 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 519
Query: 486 DIVK 489
++++
Sbjct: 520 ELIR 523
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 240/480 (50%), Gaps = 10/480 (2%)
Query: 22 KSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE--ALRLVKQMEGLGYAPN 79
K +D A F M + P F +N L+ I ++ D +L L+ +M LGY P+
Sbjct: 19 KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPS 78
Query: 80 VYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLI 139
+ T + L++G+C+ KR+++ +++ M E P+ T +L+HG+F +A L+
Sbjct: 79 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138
Query: 140 RFMER--EP--LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCL 195
R ++R +P +T +V N L R A +L KM + F+ + L
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKR----GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 194
Query: 196 VTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNV 255
+++ + +G++P TY L+ L GR + + L+ + + ++ N+
Sbjct: 195 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 254
Query: 256 NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
++N +ID F K A ++ +M R I P++ T+N+LI+G C + K +++
Sbjct: 255 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 314
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
++ PD T+N++I C++ R ED + EM G+ +T+TY LI+ L GD
Sbjct: 315 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 374
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+ ++F++M +D + PDI T++ L+ C K+EKA + F M ++ D + Y+
Sbjct: 375 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 434
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+I+ + K+G+ D+ F S+ G P+ T N ++ L + +EA+ ++K KE G
Sbjct: 435 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 494
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 205/483 (42%), Gaps = 40/483 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P T + +I L N A +M C+P+ TY ++++G+C+ G +D
Sbjct: 108 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 167
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+ +ME +V + +ID C + V + + + M+ + + PN T SL+
Sbjct: 168 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI- 226
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
CL + + S+A+ +L M ++ P
Sbjct: 227 ---SCLCSYGRW-------------------------------SDASQLLSDMIEKKINP 252
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
TF+ + V E + D IKR + P TY L+ R + +
Sbjct: 253 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 312
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ ++++YN +I FCK ++ TE+ REM R + + VT+ TLI G D
Sbjct: 313 EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 372
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ +++ ++ G PD T++ ++D LC + E AL+ M + + + Y
Sbjct: 373 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 432
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+I +C G V LF + + P++ T+N +I C +++A M
Sbjct: 433 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 492
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN--PDSYTSNLILETLVQQGRF 481
G PD+ +Y+ LI+A ++ G D+A L E C D+ T L+ ++ GR
Sbjct: 493 DGPLPDSGTYNTLIRAHLRDG--DKAASAELIREMRSCRFVGDASTIGLV-ANMLHDGRL 549
Query: 482 EEA 484
+++
Sbjct: 550 DKS 552
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 158/326 (48%)
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
A+L KM GY P T + G +++ ++D ++ G +P T+ L+ L
Sbjct: 65 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 124
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
+ + E ++ + + N+ +Y +V++ CK +D A + +M I ++
Sbjct: 125 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 184
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
V FNT+I CK V L + G +P+ T++S+I CLC R+ DA LS+
Sbjct: 185 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 244
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M+E + PN +T+N LI + G + +L M I PDI+T+N+LI FC ++
Sbjct: 245 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 304
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
++KA++ F M++ PD +Y+ LIK KS R ++ + F M G D+ T
Sbjct: 305 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 364
Query: 471 ILETLVQQGRFEEAHDIVKTSKERGI 496
+++ L G + A + K G+
Sbjct: 365 LIQGLFHDGDCDNAQKVFKQMVSDGV 390
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 192/419 (45%), Gaps = 4/419 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y V++ L K IDLA+ +M + + D +N +I +C+ VD+A
Sbjct: 144 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 203
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L K+ME G PNV TY+ LI C+ R ++ ++L M E+ + PN T +L+
Sbjct: 204 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 263
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +L ++R N+L+ + +A + M + P+
Sbjct: 264 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 323
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + + + RG+ TY L++ L+ G +
Sbjct: 324 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 383
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D + ++ +Y++++D C +++A E+ M+ +I ++ + T+I G CK
Sbjct: 384 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 443
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V +L L G KP+ T+N+MI LC ++A L +M E G P++ TYN
Sbjct: 444 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYN 503
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LIR+ GD A S L ++M++ R D T I M + +K+F ML+
Sbjct: 504 TLIRAHLRDGDKAASAELIREMRSCRFVGDAST----IGLVANMLHDGRLDKSFLDMLS 558
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ T Y +I L D A F+QM D PD TY+IL+ G+C G
Sbjct: 350 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 409
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++AL + M+ ++Y YT +I+G C A +V + + + + + V PN T +
Sbjct: 410 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 469
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ +A+ LL + E PL NTL+ + + +A ++R+M
Sbjct: 470 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 529
Query: 181 YLPESSTFDYTVTCLVTG 198
++ ++ST L G
Sbjct: 530 FVGDASTIGLVANMLHDG 547
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 231/496 (46%), Gaps = 16/496 (3%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+ +I + + A F +++ P T++ L+HG+C V EAL Q+
Sbjct: 114 FTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI- 172
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
PNV +T L++G C RV E +L+ M E + PN+ T ++V G+ + D
Sbjct: 173 ---CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 229
Query: 133 KAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
A LL + E + +V + ++ L + ++A + +M ++G P T++
Sbjct: 230 SALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCM 289
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ + +E +L +R + P T+ +L+ AL K G+ E + N + +
Sbjct: 290 INGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGI 349
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+ N +YN +ID F K N +D A + M + +P+++TF+ LI G+C V +
Sbjct: 350 IPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMK 409
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
LL + G + T+ ++I C+ ALD L EM+ GV PN +T N L+ LC
Sbjct: 410 LLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLC 469
Query: 372 AIGDVARSLRLFQKMQADR-----------ISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
G + +L +F+ MQ + + PD+ T+N LI K +AE+ +
Sbjct: 470 NNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEE 529
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M GL PD +Y+++I L K R DEA Q F SM G +PD T ++ + GR
Sbjct: 530 MPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGR 589
Query: 481 FEEAHDIVKTSKERGI 496
+ ++ RGI
Sbjct: 590 VGDGLEVFCEMGRRGI 605
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 232/508 (45%), Gaps = 16/508 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I+ LG PS ++ ++ L + + A F Q+ CKP+ + L++G+CR G
Sbjct: 137 ITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI----CKPNVIAFTTLMNGLCREGR 192
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE-RNVCPNEATVR 119
V EA+ L+ +M G PN TY ++DG C +L M+E + PN
Sbjct: 193 VVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYS 252
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+++ G+++ A L E+ N ++ ++ SEA +LR+M +R
Sbjct: 253 AIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFER 312
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
P+ TF + LV E + + + RG+ P TY +++ K R
Sbjct: 313 KMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAA 372
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+R + +V +++++ID +C +D ++ EM R + N +T+ TLI G
Sbjct: 373 ERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHG 432
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW----- 354
C+ ++ +LL ++ G P+ T N+++D LC + +DAL+ M +
Sbjct: 433 FCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLD 492
Query: 355 ------GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
V P+ TYNILI L G + + L+++M + PD T+N++I C+
Sbjct: 493 ASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQ 552
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+++++A + F SM + G PD +++ LI K GR + + F M + G ++ T
Sbjct: 553 SRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITY 612
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGI 496
++ Q G A DI + G+
Sbjct: 613 RTLIHGFCQVGNINGALDIFQEMISSGV 640
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/489 (24%), Positives = 225/489 (46%), Gaps = 12/489 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ + +++ L + + A +M D +P++ TY ++ G+C++G AL L
Sbjct: 175 PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL 234
Query: 68 VKQMEGLG-YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+++ME + PNV Y+ +IDG R + + M+E+ + PN T +++G
Sbjct: 235 LRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFC 294
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+A LL ER+ + + L+ L EA + +M RG +P +
Sbjct: 295 SSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTI 354
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + L+ + +G P T+ +L++ A R +G + L+ +
Sbjct: 355 TYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEM 414
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ LV+N +Y +I FC++ ++ A ++ +EM + PN+VT NTL+ G C + ++
Sbjct: 415 SRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKL 474
Query: 307 HKTRELLVMLLECGF-----------KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
E+ ++ + +PD T+N +I L +F +A + EM G
Sbjct: 475 KDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRG 534
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ P+TITYN +I LC + + ++F M + SPD+ TF LI +C++ ++
Sbjct: 535 LVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGL 594
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ F M G+ + +Y LI + G + A F M +G PD+ T +L L
Sbjct: 595 EVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 654
Query: 476 VQQGRFEEA 484
+ + A
Sbjct: 655 WSKEELKRA 663
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/495 (25%), Positives = 218/495 (44%), Gaps = 53/495 (10%)
Query: 51 LIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
L+ + R+ D + L ++ME N+Y++TILI FC+ ++ + +
Sbjct: 82 LLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLG 141
Query: 111 VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA 170
P+ T +L+HG+ C++ + L F + + TL+ L EA
Sbjct: 142 FHPSLVTFSTLLHGL--CVEDRVSEAL--HFFHQICKPNVIAFTTLMNGLCREGRVVEAV 197
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF--IKRGVKPRFSTYLLLME 228
A+L +M + G P T+ V + D +L + R +KP Y +++
Sbjct: 198 ALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSR-IKPNVVIYSAIID 256
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
L+K GR + + + + + N+ +YN +I+ FC A + REM +R ++P
Sbjct: 257 GLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSP 316
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL------------- 335
++VTF+ LI+ K+ + + EL +L G P+ T+NSMID
Sbjct: 317 DVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMF 376
Query: 336 ----------------------CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
C A R +D + L EM G+ NTITY LI C +
Sbjct: 377 YLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQL 436
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL------- 426
G++ +L L Q+M + + P++ T N L+ C K++ A + F M +
Sbjct: 437 GNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHP 496
Query: 427 ----RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
PD +Y+ LI LI G+F EA++ + M G PD+ T N +++ L +Q R +
Sbjct: 497 FNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLD 556
Query: 483 EAHDIVKTSKERGIS 497
EA + + +G S
Sbjct: 557 EATQMFDSMGSKGFS 571
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 203/459 (44%), Gaps = 12/459 (2%)
Query: 5 GISPSTRLYNAVIDALVK-SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G+ P+ Y ++D + K +++ L + V + KP+ Y+ +I G+ + G +
Sbjct: 207 GLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTD 266
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L +M+ G +PN++TY +I+GFC++ R +E R+L M ER + P+ T L++
Sbjct: 267 AQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLIN 326
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +A EL + R + + N+++ S + A + M +G P
Sbjct: 327 ALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSP 386
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF + +++ +L +RG+ TY L+ + G L
Sbjct: 387 DVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLL 446
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD-----------RDIAPNLVT 292
+ + NV + N ++D C + A E+ + M+ D+ P++ T
Sbjct: 447 QEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQT 506
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+N LI G + + + EL + G PD T+NS+ID LC+ R ++A M
Sbjct: 507 YNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMG 566
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
G P+ +T+ LI C +G V L +F +M I + T+ LI FC++ I
Sbjct: 567 SKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNIN 626
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
A F M++ G+ PD + ++ L A Q
Sbjct: 627 GALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 153/322 (47%), Gaps = 15/322 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+T YN++ID K N +D A F M+ C PD T++ILI G C VD+
Sbjct: 348 GIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDG 407
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+ +M G N TYT LI GFC + +L+ M VCPN T +L+ G
Sbjct: 408 MKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDG 467
Query: 125 V---FRCLDPHKAFELLIR----------FMEREPLTQKLVCNTLLYRLSNNSMASEAAA 171
+ + D + F+++ + F + EP Q N L+ L N SEA
Sbjct: 468 LCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTY--NILICGLINEGKFSEAEE 525
Query: 172 ILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY 231
+ +M RG +P++ T++ + L L+E + D+ +G P T+ L+
Sbjct: 526 LYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYC 585
Query: 232 KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
K GR +G + + +V+N +Y +I FC+V ++ A +I +EM + P+ +
Sbjct: 586 KVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTI 645
Query: 292 TFNTLISGHCKDAEVHKTRELL 313
T +++G E+ + + L
Sbjct: 646 TIRNMLTGLWSKEELKRAVQCL 667
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 161/354 (45%), Gaps = 11/354 (3%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+SP ++ +I+ALVK A + +M P+ TYN +I G + +D A
Sbjct: 314 MSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAE 373
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
R+ M G +P+V T++ILIDG+C AKRV + ++L M R + N T +L+HG
Sbjct: 374 RMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGF 433
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD------- 178
+ + + A +LL + + CNTLL L NN +A + + M
Sbjct: 434 CQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDA 493
Query: 179 ----RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
P+ T++ + L+ +E + + RG+ P TY +++ L K
Sbjct: 494 SHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQS 553
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
R E + + + +V ++ +I+ +CKV + E+ EM R I N +T+
Sbjct: 554 RLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYR 613
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
TLI G C+ ++ ++ ++ G PD T +M+ L + A+ CL
Sbjct: 614 TLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 128/275 (46%), Gaps = 40/275 (14%)
Query: 261 VIDCFCK----VNMMDR---ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
VID FCK V M+R + R+M R I N+ +F LI C +++
Sbjct: 76 VID-FCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTF 134
Query: 314 VMLLECGFKPDKFTFNSMI-------------------------------DCLCRAHRFE 342
+ + GF P TF++++ + LCR R
Sbjct: 135 GKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPNVIAFTTLMNGLCREGRVV 194
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM-QADRISPDIYTFNAL 401
+A+ L MVE G+ PN ITY ++ +C +GD +L L +KM + RI P++ ++A+
Sbjct: 195 EAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAI 254
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I + + A+ F M G+ P+ F+Y+ +I SGR+ EA++ M +
Sbjct: 255 IDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKM 314
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+PD T ++++ LV++G+F EA ++ RGI
Sbjct: 315 SPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGI 349
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 77/171 (45%), Gaps = 4/171 (2%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P F ++ + R R + + +M +P N ++ ILI+ C+ + +L
Sbjct: 74 PCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALST 133
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
F K+ P + TF+ L+ C +++ +A F + +P+ +++ L+ L +
Sbjct: 134 FGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI----CKPNVIAFTTLMNGLCR 189
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
GR EA M ++G P+ T I++ + + G A ++++ +E
Sbjct: 190 EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEE 240
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 135/464 (29%), Positives = 226/464 (48%), Gaps = 14/464 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T Y ++I K+ ++DLA+ F +M D C P+ TY+ LI+G+C G ++EA
Sbjct: 232 GACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEA 291
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++++M G P V+ YTI I C+A R E ++L MK+R PN T +L+ G
Sbjct: 292 MDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISG 351
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE-----AAAILRKMGDR 179
+ R FE+ I + L LV + Y N + E A I M
Sbjct: 352 LSR----DGKFEVAIGVYHKM-LADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSH 406
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
LP + T++ + + + + I D +K G P TY +++ +K G
Sbjct: 407 DSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNA 466
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
R L + + L + +Y +I F + ++ A + EM + I+PN+VT+N +I+G
Sbjct: 467 MRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIING 526
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ A+V L ++E G P T+N MI + +R +A + +MV+ G+ PN
Sbjct: 527 YLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPN 586
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
ITY I LC G + + ++F +M+ P++ T+++LI C+ + E AE+
Sbjct: 587 VITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAER--- 643
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+L G P+ +Y+ L++ L GR EA Q SM++ G P
Sbjct: 644 -LLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQP 686
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 217/484 (44%), Gaps = 35/484 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ +NA+I L + A L + PD FTY LI G C+ G +D A
Sbjct: 197 GIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLA 256
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G PN TY+ LI+G C+ R+ E +LE M ++ + P VH
Sbjct: 257 FEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPT-------VH- 308
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
A+ + I L + + EA +L KM RG P
Sbjct: 309 ---------AYTIPI------------------VSLCDAGRSCEAVKLLGKMKKRGCGPN 341
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ ++ L G+ + G+ P TY L+ LY GR
Sbjct: 342 VQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFE 401
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N +YN++I FC + + +AT I +M +PN++T+N +I + K
Sbjct: 402 WMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQG 461
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ LL M+ G K D +T+ ++I R + E A +EMVE G+ PN +TYN
Sbjct: 462 YMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYN 521
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I + V +L LF KM P T+N +I F + N+I +AE M+
Sbjct: 522 AIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQ 581
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL P+ +Y++ I L K+GR A + F M++ P+ T + +++ L Q+G+ E+A
Sbjct: 582 GLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA 641
Query: 485 HDIV 488
++
Sbjct: 642 ERLL 645
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/492 (24%), Positives = 214/492 (43%), Gaps = 7/492 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ + Y A+I L + ++A + +M D P TY+ LI+ + G + A
Sbjct: 337 GCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETA 396
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + + M PN TY ++I GFC+ + + + + M + PN T ++H
Sbjct: 397 LTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHI 456
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ + A LL L+ S A ++ +M + G P
Sbjct: 457 YFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPN 516
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + +T +++ + ++ G P TY +++ K R E + +
Sbjct: 517 VVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCG 576
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K L+ NV +Y ID CK A +I EM+ RD PNL T+++LI G C++
Sbjct: 577 KMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEG 636
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ LL + G +P+ T+ +++ LC R +A + M + G+ P+ Y
Sbjct: 637 QAEDAERLL----DDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYR 692
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ C +V +L++F M P + + ALI + C+ N +KA+ F +ML
Sbjct: 693 ALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKK 752
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
D ++ L+ L+K G D + + ME C + T ++ L G +
Sbjct: 753 HWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSALGC---S 809
Query: 485 HDIVKTSKERGI 496
+I + SK+ GI
Sbjct: 810 IEIPQISKQLGI 821
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 214/490 (43%), Gaps = 4/490 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ Y I +L + A +M C P+ TY LI G+ R G + A
Sbjct: 302 GIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVA 361
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + +M G P TY+ LI+ R + E M + PN T ++ G
Sbjct: 362 IGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKG 421
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
KA + + ++ P + N +++ + A +L M G +
Sbjct: 422 FCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLD 481
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T+ ++ G L + + ++ G+ P TY ++ + +
Sbjct: 482 TWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFW 541
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + V + +YNM+I F K N + A C +M + + PN++T+ + I G CK+
Sbjct: 542 KMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNG 601
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + + + P+ T++S+ID LC+ + EDA +++ G PN TY
Sbjct: 602 RTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYT 657
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+R LC G + +L + M+ + P + AL+ C+ ++E A K F SM+T
Sbjct: 658 TLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTT 717
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G +P Y ALI AL K+ +A+ F +M + N D ++L+ L+++G + +
Sbjct: 718 GFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLS 777
Query: 485 HDIVKTSKER 494
+++ + R
Sbjct: 778 LELLHVMESR 787
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 128/264 (48%), Gaps = 5/264 (1%)
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
GRDV Y+ + + N+ ++N +I C + A I + P+ T+
Sbjct: 186 GRDV----YI-EMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTY 240
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
+LI GHCK+ + E+ +++ G P+ T++++I+ LC R E+A+D L EM++
Sbjct: 241 TSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMID 300
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
G+ P Y I I SLC G +++L KM+ P++ T+ ALI R K E
Sbjct: 301 KGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEV 360
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A + ML GL P +YSALI L GRF+ A F M + P++ T N+I++
Sbjct: 361 AIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIK 420
Query: 474 TLVQQGRFEEAHDIVKTSKERGIS 497
G ++A I + G S
Sbjct: 421 GFCSIGYIQKATAIFDQMLKAGPS 444
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 150/344 (43%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
+TLL +L M + +M + G P TF+ + L + E I+
Sbjct: 171 STLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFH 230
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G P TY L+ K G + + KD N +Y+ +I+ C ++
Sbjct: 231 YGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEE 290
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A ++ EM D+ I P + + I C + +LL + + G P+ T+ ++I
Sbjct: 291 AMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALIS 350
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
L R +FE A+ +M+ G+ P +TY+ LI L G +L +F+ M + P
Sbjct: 351 GLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLP 410
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
+ T+N +I+ FC + I+KA F ML G P+ +Y+ +I K G + A +
Sbjct: 411 NTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLL 470
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M+ NG D++T ++ + G+ E A + E GIS
Sbjct: 471 EMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGIS 514
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 135/290 (46%)
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+ G++P T+ +++ L G+ E + + H+F + +Y +I CK +
Sbjct: 194 LNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNL 253
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
D A E+ M PN VT++ LI+G C + + + ++L +++ G +P +
Sbjct: 254 DLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIP 313
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
I LC A R +A+ L +M + G PN TY LI L G ++ ++ KM AD +
Sbjct: 314 IVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGL 373
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
P T++ALI + E A F ML+ P+ +Y+ +IK G +A
Sbjct: 374 VPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATA 433
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
F M + G +P+ T N+I+ +QG A +++ K G+ ++
Sbjct: 434 IFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTW 483
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 225/483 (46%), Gaps = 5/483 (1%)
Query: 3 FLGISPSTRL----YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRI 58
F ++P L Y VI L S ID A F+++ C P+ Y +I G+ +
Sbjct: 97 FRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKA 156
Query: 59 GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
G +++ L+ ++M G P TYT++IDG C A+ + + +V E M ++ P+ T
Sbjct: 157 GRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITY 216
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
+L+ G + +A +LL + + P + ++++ M +EA ++ +M +
Sbjct: 217 TTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRE 276
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
RG P F ++ ++ E +L RG P Y L++ L+ GR E
Sbjct: 277 RGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPE 336
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + + +Y +I F K+ ++ A EI M + P+ +N+L+
Sbjct: 337 ARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMD 396
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE-WGVP 357
G+ K V + + ++ G KP+ TFN ++ L + + + A EM+E VP
Sbjct: 397 GYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVP 456
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P ++Y ILI L G V+ + FQ+M I P+ +T+ +LI S + +I +A+K
Sbjct: 457 PTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKL 516
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
M+ LG+ PD +YSALI LI S D A F M + GC P+ T ++
Sbjct: 517 VEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRA 576
Query: 478 QGR 480
GR
Sbjct: 577 AGR 579
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 218/453 (48%), Gaps = 4/453 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP+ Y AVID L+K+ I+ F++MS C P R TY ++I G+C+ ++ +A
Sbjct: 138 GCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDA 197
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +QM G P+ TYT LIDGF A ++ E ++L++M + P T S+VHG
Sbjct: 198 CKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHG 257
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ ++A E++ + ER + +LL + A EA +L +M RG P+
Sbjct: 258 FCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPD 317
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + L + + E + D+ I++G P TY +++ K G L
Sbjct: 318 VILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILE 377
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K + + +YN ++D + K+ +D+A + M I PN VTFN L+ G KD
Sbjct: 378 LMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDG 437
Query: 305 EVHKTRELLVMLLEC-GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + L +LE P ++ +ID L +A R +A EM++ G+ P TY
Sbjct: 438 KTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTY 497
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI SL G + + +L + M ++PD+ ++ALI + ++ A F M+
Sbjct: 498 TSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMK 557
Query: 424 LGLRPDNFSYSALIKALIKSGR---FDEAKQTF 453
G P+ +Y L + +GR + KQ F
Sbjct: 558 RGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHF 590
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/495 (23%), Positives = 222/495 (44%), Gaps = 7/495 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P+ YN VI L + +D AY F M + C+PD + LIHG C+ G
Sbjct: 1 MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRV-AEVFRVLEIMKERNVCPNEATVRSLV 122
+L+ Q + P+V+ YT +I G+C A + FR + +V ++ L
Sbjct: 61 GHKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLA 119
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ +D +A EL + ++ L + +M +
Sbjct: 120 DS--KRID--EACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCV 175
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P +T+ + L L + C + + +++G P TY L++ KA + E +
Sbjct: 176 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 235
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L+ + +Y ++ FCK++M++ A E+ +MR+R P L F +L+S +
Sbjct: 236 LDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLS 295
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ ++L + G PD + S+ID L R +A M+E G P+ +T
Sbjct: 296 KGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALT 355
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y +I++ IG+V + + + M + PD + +N+L+ + ++ ++++A + M+
Sbjct: 356 YGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMV 415
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM-EQNGCNPDSYTSNLILETLVQQGRF 481
G++P+ +++ L+ L K G+ D A F M E+ P + ++++ L + GR
Sbjct: 416 ASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRV 475
Query: 482 EEAHDIVKTSKERGI 496
EA + +RGI
Sbjct: 476 SEAFLQFQEMIDRGI 490
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/497 (26%), Positives = 229/497 (46%), Gaps = 35/497 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G+ P+ N +I++ N + A+ ++ +PD T+ LI G+C G + E
Sbjct: 94 FGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGE 153
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L +M G+ PNV TY LI+G C + R+L M++ N P+ S++
Sbjct: 154 ALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID 213
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +AF L + + + +L++ L N +L +M + LP
Sbjct: 214 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 273
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ F V L + E I+D I+RGV+P
Sbjct: 274 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP------------------------- 308
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+V +Y ++D C + MD A ++ M + AP+++++ TLI+G+CK
Sbjct: 309 ----------DVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKI 358
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ K L + + PD T+N+++ LC R +DA+ EMV G P+ +TY
Sbjct: 359 HKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTY 418
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+IL+ SLC + ++ L + ++A ++PDI +N +I CR ++E A F ++ +
Sbjct: 419 SILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 478
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL P ++Y+ +I L K G +EA + F+ M+ N C+PD T N I +Q
Sbjct: 479 KGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLR 538
Query: 484 AHDIVKTSKERGISFKS 500
A +++ RG S S
Sbjct: 539 AIQLLEEMLARGFSADS 555
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 35/263 (13%)
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
N +D A + P++V F L++ K L + G P+ +T
Sbjct: 44 NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTL 103
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N +I+ C +R A L+++++ G P+ T+ LIR LC G + +L LF KM
Sbjct: 104 NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 163
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ P++ T+ LI C++ A + SM +PD Y+++I +L K + E
Sbjct: 164 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTE 223
Query: 449 AKQTFLSMEQNGCNPD--SYTS---------------------------------NLILE 473
A F M G +PD +YTS + +++
Sbjct: 224 AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVD 283
Query: 474 TLVQQGRFEEAHDIVKTSKERGI 496
L ++G+ EAH+IV +RG+
Sbjct: 284 ALCKEGKVTEAHEIVDMMIQRGV 306
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ PS YN +I L K ++ A F +M + C PD TYN + G +
Sbjct: 476 LSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNE 535
Query: 61 VDEALRLVKQMEGLGYAPN 79
A++L+++M G++ +
Sbjct: 536 TLRAIQLLEEMLARGFSAD 554
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 143/491 (29%), Positives = 225/491 (45%), Gaps = 5/491 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ + YN V+D LV +N +A F +M P +T+ +++ +C + VD A L
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSL 230
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ M G PN Y LI RV E ++LE M P+ T +++G+ R
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCR 290
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
H+ +L+ R + R + L+ L EA +L K+ P
Sbjct: 291 LNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PNDVH 346
Query: 188 FDYTVTCLVTGLDLNETCGIL-DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
F + V L+E L D IK G +P T+ L+ L K G +N +
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDM 406
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ N+ +Y ++D FCK N ++ A + EM + N++ +N L+ CK+ +V
Sbjct: 407 SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKV 466
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
K ++L + + G KPD FTFN++I LC+ R EDAL +M+ GV NT+TYN L
Sbjct: 467 PKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTL 526
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I + G + +L+L M D T+N LI++FC++ EKA F M+ L
Sbjct: 527 IHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDL 586
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P N S + LI L + G+ A + M G PD T N ++ L + G EA +
Sbjct: 587 VPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFN 646
Query: 487 IVKTSKERGIS 497
+ + GI
Sbjct: 647 LFNKLQAEGIQ 657
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 227/482 (47%), Gaps = 5/482 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ + V+ AL N +D A + M+ C P+ Y LIH + + V+EA
Sbjct: 203 GVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEA 262
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L+++M +G P+V T+ +I G C R+ E ++++ M R PN+ T L++G
Sbjct: 263 LKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNG 322
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILR-KMGDRGYLP 183
+ R +A LL + P + L+ + EA A L KM G P
Sbjct: 323 LCRVGKVDEAQVLL----NKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRP 378
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF+ + L + +++ G P TY L++ K + E L
Sbjct: 379 DVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVL 438
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + N+ YN+++ CK + +A ++ EM D+ P++ TFNTLI G CK
Sbjct: 439 NEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKV 498
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
L +L G + T+N++I R ++AL +++M+ G P + ITY
Sbjct: 499 DRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITY 558
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI++ C +G ++L LF +M + P + N LI CR+ K+ A + M+
Sbjct: 559 NGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIH 618
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL PD +Y++LI L K G EA F ++ G PD+ T N ++ + G F++
Sbjct: 619 RGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDD 678
Query: 484 AH 485
A+
Sbjct: 679 AY 680
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 235/498 (47%), Gaps = 18/498 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P++ +Y +I AL K + ++ A ++M + C PD T+N +I+G+CR+ + E
Sbjct: 238 GCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEG 297
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+LV +M G+ PN TY +L++G C +V E +++ + PN+ L++G
Sbjct: 298 AKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEA----QVLLNKVPTPNDVHFTILING 353
Query: 125 VFRC--LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ LD AF L + ++ NTL++ L + A ++ M G
Sbjct: 354 YVKSGRLDEANAF-LYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCT 412
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T+ + L E +L+ +G + Y +L+ AL K G+ +
Sbjct: 413 PNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDM 472
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + ++ ++N +I CKV+ + A + R+M + N VT+NTLI +
Sbjct: 473 LGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLR 532
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + +L+ +L G D+ T+N +I C+ E AL EMV + P+ I+
Sbjct: 533 GGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNIS 592
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
N+LI LC +G V +L L + M ++PD+ T+N+LI C+M I +A F +
Sbjct: 593 CNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQ 652
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G++PD +Y+ LI ++G FD+A L +N P+ T +++ +++
Sbjct: 653 AEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKE---- 708
Query: 483 EAHDIVKTSKERGISFKS 500
KE GISF +
Sbjct: 709 -------IGKENGISFGT 719
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 192/414 (46%), Gaps = 10/414 (2%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
GY Y +LID AK + ++L +KE + E+ ++ R P +A
Sbjct: 97 GYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQA 156
Query: 135 FELLIRFMER---EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
+L+ EP + N +L L + + S AA + +M +G +P TF
Sbjct: 157 TRMLLDMKGVYCCEPTFKSY--NVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVV 214
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ L +++ C +L K G P Y L+ AL K R E + L +F
Sbjct: 215 MKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGC 274
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+ +V+++N VI C++N + ++ M R PN +T+ L++G C+ +V + +
Sbjct: 275 LPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQV 334
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL-SEMVEWGVPPNTITYNILIRSL 370
LL + P+ F +I+ ++ R ++A L +M++ G P+ T+N LI L
Sbjct: 335 LLNKVP----TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGL 390
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C G + ++ + M A+ +P++ T+ L+ FC+ N++E+A M G +
Sbjct: 391 CKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNI 450
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
Y+ L++AL K+G+ +A M GC PD +T N ++ L + R E+A
Sbjct: 451 MGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDA 504
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 149/515 (28%), Positives = 244/515 (47%), Gaps = 24/515 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS YNAV+ AL + S+ A F M D P+ +TYNIL+ +C G EA
Sbjct: 151 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +++ M G G PNV TY L+ F A V R++ +M+E + PN T S+V+G
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269
Query: 125 VFRCL---DPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + D K F+ ++R E L V NTL+ + EA ++ +M +G
Sbjct: 270 MCKAGKMEDARKVFDEMVR----EGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 325
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P+ TF + + +L ++ +RG++ T+ L++ K G +
Sbjct: 326 IMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 385
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + R+ +V YN +I+ +C V MD A E+ EM + + P++VT++T+IS +
Sbjct: 386 LAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 445
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ + H EL +LE G PD T++S+I LC R DA M++ G+ P+
Sbjct: 446 CKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDE 505
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
TY LI C G+V +L L KM + PD+ T++ LI + + +A++ F
Sbjct: 506 FTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFK 565
Query: 421 MLTLGLRPDNFSYSALI----KALIKS-----------GRFDEAKQTFLSMEQNGCNPDS 465
+ P N Y AL+ KA +KS G +EA + + SM N D
Sbjct: 566 LYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDG 625
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
++++ + G +A K + G + S
Sbjct: 626 SVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNS 660
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 167/351 (47%), Gaps = 1/351 (0%)
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
L N +L LS+ S+ S A M G P T++ V L E IL
Sbjct: 157 LAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRD 215
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
G P TY L+ A ++AG +R + + + L N+ ++N +++ CK
Sbjct: 216 MRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGK 275
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
M+ A ++ EM +AP+ V++NTL+ G+CK H+ + + + G PD TF S
Sbjct: 276 MEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTS 335
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I +C+A E A+ + +M E G+ N +T+ LI C G + +L + M+ R
Sbjct: 336 LIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCR 395
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
I P + +NALI +C + ++++A + M GL+PD +YS +I A K+ A
Sbjct: 396 IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAF 455
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ M + G PD+ T + ++ L + R +AH + K + G+ F
Sbjct: 456 ELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEF 506
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/480 (22%), Positives = 206/480 (42%), Gaps = 27/480 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ +N++++ + K+ ++ A F +M + PD +YN L+ G C+ G EA
Sbjct: 255 GLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEA 314
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + +M G P+V T+T LI C A + ++ M+ER + NE T +L+ G
Sbjct: 315 LSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDG 374
Query: 125 VFRCLDPHKAFE----LLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDR 179
+ K F L +R M++ + +VC N L+ EA +L +M +
Sbjct: 375 FCK-----KGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAK 429
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G P+ T+ ++ D + + +++GV P TY L+ L R +
Sbjct: 430 GLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDA 489
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
++ K L + +Y +ID CK ++ A + +M + P++VT++ LI+G
Sbjct: 490 HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLING 549
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL----------- 348
K A + ++LL L P +++++ C CR + L L
Sbjct: 550 LSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHC-CRKAELKSVLALLKGFCMKGLMNE 608
Query: 349 -----SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
M++ + Y++LI C G+V ++L ++M +P+ + +LI+
Sbjct: 609 ADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIR 668
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ +A++ +L D + ALI + G D M ++G P
Sbjct: 669 GLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 728
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 170/409 (41%), Gaps = 58/409 (14%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P + ++I + K+ +++ A +QM + + T+ LI G C+ G +D+A
Sbjct: 325 GIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDA 384
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L V+ M+ P+V Y LI+G+C R+ E +L M+ + + P+ T +++
Sbjct: 385 LLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISA 444
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D H AFEL + +E+ L + ++L+ L S+A + + M G P+
Sbjct: 445 YCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPD 504
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
++T T L+ G ++ + D +K GV P TY +L+ L K+ R +E
Sbjct: 505 ----EFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQ 560
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDC---------------FCKVNMMDRATEICREMRDR- 284
+ L ++ + + Y+ ++ C FC +M+ A ++ + M DR
Sbjct: 561 QLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRN 620
Query: 285 ----------------------------------DIAPNLVTFNTLISGHCKDAEVHKTR 310
APN + +LI G ++ V +
Sbjct: 621 WNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEAD 680
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+++ LL D ++ID + LD L M + G+ P+
Sbjct: 681 QVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 93/235 (39%), Gaps = 25/235 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P Y ++ID K +++ A +M PD TY++LI+G+ + E
Sbjct: 499 LGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAME 558
Query: 64 ALRLVKQMEGLGYAPNVYTYT---------------ILIDGFCNAKRVAEVFRVLEIMKE 108
A +L+ ++ P Y L+ GFC + E +V + M +
Sbjct: 559 AQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLD 618
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE 168
RN + + L+HG R + KA + ++ +L+ L N M E
Sbjct: 619 RNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVE 678
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE-----TCGILDTFIKRGVKP 218
A +++++ L S D + + L+LNE +L K G+ P
Sbjct: 679 ADQVIQQL-----LNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 728
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 230/506 (45%), Gaps = 41/506 (8%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM---EGLGYAPNVYTYTILIDG 89
Q+M C PD +Y+IL+ G C +EAL L++ M G PNV TYT +IDG
Sbjct: 157 LQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDG 216
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C A+ V + M + V PN T L+HG + ++L + R
Sbjct: 217 LCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSAR---GL 273
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
K C T L+ SE + L M + G P+ F+ + +++ I +
Sbjct: 274 KPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFN 333
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+ G+ P Y L++AL K GR + + N + + + N+ +N ++ C V+
Sbjct: 334 KMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVD 393
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+RA E+ EM D+ I PN V FNTLI C V + R L+ ++ G +PD F++
Sbjct: 394 KWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYT 453
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+I C A R ++A MV G+ P +TYN L+ C+ + + LF++M
Sbjct: 454 PLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRK 513
Query: 390 RISP-----------------------------------DIYTFNALIQSFCRMNKIEKA 414
++P DIYT+N ++ C+ N +++A
Sbjct: 514 GVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEA 573
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
K F S+ + GL+ + +++ +I AL+K GR ++A F ++ NG P+ T L+ E
Sbjct: 574 FKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAEN 633
Query: 475 LVQQGRFEEAHDIVKTSKERGISFKS 500
L+++G EE + ++ G + S
Sbjct: 634 LIEEGSLEEFDSLFSAMEKNGTAPNS 659
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 225/490 (45%), Gaps = 50/490 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P+T Y+ +I L + + ++ F + + + N L+ G+C V EA+
Sbjct: 94 VAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAM 153
Query: 66 R-LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE---RNVCPNEATVRSL 121
L+++M LG P+ +Y+IL+ GFCN R E +L +M R+ PN T ++
Sbjct: 154 DVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTV 213
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ G +C L+ A + ++M D G
Sbjct: 214 IDG---------------------------LCKAQLF--------DRAEGVFQQMIDNGV 238
Query: 182 LPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
P + T++ CL+ G E +L+ RG+KP TY L+ L
Sbjct: 239 KPNNDTYN----CLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALS--- 291
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E +L+ + ++ L + + +N+ + K M+D+A +I +MR ++PN+V + LI
Sbjct: 292 EMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALI 351
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
CK V ++ G P+ FNS++ LC ++E A + + EM++ G+
Sbjct: 352 DALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGIC 411
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
PN + +N LI +LC +G V RL M+ + PD +++ LI +C + ++AEK
Sbjct: 412 PNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKV 471
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F M+++GL P +Y+ L+ + R D+A F M + G P T N IL L Q
Sbjct: 472 FDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQ 531
Query: 478 QGRFEEAHDI 487
RF EA ++
Sbjct: 532 TKRFSEAKEL 541
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 225/494 (45%), Gaps = 5/494 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y VID L K+ D A FQQM + KP+ TYN LIHG IG E +++
Sbjct: 205 PNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQM 264
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+++M G P+ YTY L++ C ++E+ L++M E + P+ +
Sbjct: 265 LEKMSARGLKPDCYTYGSLLNYLC---ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAK 321
Query: 128 CLDPHKAFELLIRFMEREPLTQKLV-CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
C KA ++ + M + L+ +V L+ L +A +M + G P
Sbjct: 322 CGMIDKAMDIFNK-MRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIV 380
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
F+ V L T ++ + +G+ P + L+ L GR +EG R ++ +
Sbjct: 381 VFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLM 440
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ + SY +I +C D A ++ M ++P VT+NTL+ G+C + +
Sbjct: 441 EHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRI 500
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
L +L G P T+N+++ L + RF +A + M+ G + TYNI+
Sbjct: 501 DDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNII 560
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ LC V + ++FQ + + + +I TF +I + + + E A F ++ GL
Sbjct: 561 LNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGL 620
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P+ +Y + + LI+ G +E F +ME+NG P+S N ++ L+ +G A
Sbjct: 621 VPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGA 680
Query: 487 IVKTSKERGISFKS 500
+ ER S ++
Sbjct: 681 YLSKLDERNFSVEA 694
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 201/443 (45%), Gaps = 12/443 (2%)
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
R+V++ + APN TY+ILI C R+ F ++ + N+ + L+ G+
Sbjct: 85 RMVRECS-IKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGL 143
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGD---RGY 181
+A ++L++ M T V ++L + N + A EA +LR M + R
Sbjct: 144 CDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSC 203
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P T+ + L + G+ I GVKP TY L+ G+ E +
Sbjct: 204 PPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQ 263
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + L + +Y +++ C ++ M ++ M + ++P+ FN S +
Sbjct: 264 MLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDL---MVENGLSPDHHIFNIFFSAYA 320
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + K ++ + + G P+ + ++ID LC+ R +DA ++M+ GV PN +
Sbjct: 321 KCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIV 380
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
+N L+ LC + R+ L +M I P+ FN LI + C + ++ + + M
Sbjct: 381 VFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLM 440
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+G+RPD FSY+ LI +GR DEA++ F M G +P T N +L R
Sbjct: 441 EHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRI 500
Query: 482 EEAHDIVKTSKERGISFKSFPGL 504
++A+ + + +G++ PG+
Sbjct: 501 DDAYCLFREMLRKGVT----PGV 519
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 174/404 (43%), Gaps = 41/404 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP+ Y A+IDAL K +D A +KF QM + P+ +N L++G+C + + A
Sbjct: 339 GLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERA 398
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LV +M G PN + LI CN RV E R++++M+ V P+ + L+ G
Sbjct: 399 EELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISG 458
Query: 125 ---VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
R + K F+ ++ + P ++ NTLL+ + S +A + R+M
Sbjct: 459 YCLAGRTDEAEKVFDGMVS-IGLSP--TEVTYNTLLHGYCSASRIDDAYCLFREM----- 510
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+++GV P TY ++ L++ R E
Sbjct: 511 ------------------------------LRKGVTPGVVTYNTILHGLFQTKRFSEAKE 540
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
++ ++ +YN++++ CK N +D A ++ + + + + N++TF +I
Sbjct: 541 LYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALL 600
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K +L + G P+ T+ + + L E+ S M + G PN+
Sbjct: 601 KGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQ 660
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
N L+R L GD++R+ K+ S + T + LI F
Sbjct: 661 MLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIF 704
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 130/324 (40%), Gaps = 10/324 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ +N +I L + M +PD F+Y LI G C G DEA
Sbjct: 409 GICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEA 468
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ M +G +P TY L+ G+C+A R+ + + + M + V P T +++HG
Sbjct: 469 EKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHG 528
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F+ +A EL + + N +L L ++ EA + + + +G
Sbjct: 529 LFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLN 588
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + L+ G + + G+ P TY L+ E L + G E D +
Sbjct: 589 IITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFS 648
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K+ N N ++ + RA ++ +R+ + T + LIS D
Sbjct: 649 AMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIFTSDE 708
Query: 305 EVHKTRELLVMLLECGFKPDKFTF 328
H + L P+K+ F
Sbjct: 709 YQHHAKSL----------PEKYHF 722
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 224/493 (45%), Gaps = 35/493 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ + +I++ N + A+ ++ +PD T+ LI GI G + EA
Sbjct: 91 GIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEA 150
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M G G+ P+V TY LI+G C + R+L M ++N PN +++
Sbjct: 151 LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDS 210
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF L + + N+L++ L N A +L +M D +P+
Sbjct: 211 LCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 270
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+F+ V L + E ++D I+RGV+P
Sbjct: 271 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEP-------------------------- 304
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
NV +Y ++D C ++ MD A ++ M + PN++++NTLI+G+CK
Sbjct: 305 ---------NVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQ 355
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ K L + PD T++++I LC R +DA+ EMV PN +TY
Sbjct: 356 RIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYR 415
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
IL+ LC +A ++ L + ++ + PDI N I CR ++E A F ++ +
Sbjct: 416 ILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 475
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL+PD ++YS +I L + G DEA + F M++NGC + N I ++ A
Sbjct: 476 GLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRA 535
Query: 485 HDIVKTSKERGIS 497
+++ RG S
Sbjct: 536 IQLLQEMVARGFS 548
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 214/486 (44%), Gaps = 35/486 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P T + +I + I A F +M + +PD TY LI+G+C++G
Sbjct: 125 LGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSA 184
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+RL+ M PNV+ Y +ID C ++V E F + M + + P+ T SL+H
Sbjct: 185 AIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIH 244
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+CN ++ A +L +M D +P
Sbjct: 245 A---------------------------LCNLCEWK--------HVATLLNEMVDSKIMP 269
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ +F+ V L + E ++D I+RGV+P TY LM+ E +
Sbjct: 270 DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVF 329
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + NV SYN +I+ +CK+ +D+A + EM +++ P+ VT++TLI G C
Sbjct: 330 DTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV 389
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ L ++ C P+ T+ ++D LC+ +A+ L + + P+
Sbjct: 390 ERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVN 449
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI I +C G++ + LF + + + PD++T++ +I CR +++A K F M
Sbjct: 450 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDE 509
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G + Y+ + + +++ A Q M G + D+ T L ++ L G +
Sbjct: 510 NGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQS 569
Query: 484 AHDIVK 489
I++
Sbjct: 570 LKQILR 575
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%)
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
+ A+ + M+ PP+T+ +N L+ S+ + + L L +M + I P+IYT +
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI SFC +N++ A +L LG +PD +++ LI+ + G+ EA F M G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161
Query: 461 CNPDSYTSNLILETLVQQGRFEEA 484
PD T ++ L + G A
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAA 185
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 237/491 (48%), Gaps = 1/491 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS YN ++ L K ++ A F++M D P+ TYNILI +CR G ++ A
Sbjct: 365 GSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAA 423
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + ME G PNV T I+ID C A+++ E + E M ++ PN T SL+ G
Sbjct: 424 LEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDG 483
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +C A+ L + ++ + +V +L+ + I ++M G P+
Sbjct: 484 LGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPD 543
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + C+ + + + G P +Y +L+ L KAG E
Sbjct: 544 LTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFY 603
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + V + ++YN VID FCK +++A ++ EM+ + P +VT+ ++I G K
Sbjct: 604 AMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKID 663
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L G K + ++S+ID + R ++A + E+++ G+ PN T+N
Sbjct: 664 RLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 723
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ +L ++ +L FQ M+ + P+ T++ LI CR+ K KA + M L
Sbjct: 724 CLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKL 783
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL+P+ +Y+ +I L K+G EA F + NG PDS + N ++E L + +A
Sbjct: 784 GLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDA 843
Query: 485 HDIVKTSKERG 495
+ + + ++ +G
Sbjct: 844 YALFEETRLKG 854
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 226/481 (46%), Gaps = 3/481 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++I L K+N +D A F+Q+ ++ P + YN +I G G DEA
Sbjct: 295 GLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEA 354
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+++ + G P+V Y ++ +RV E R+ E MK R+ PN T L+
Sbjct: 355 YGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDM 413
Query: 125 VFRCLDPHKAFELLIRFMEREPL-TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ R + A E+ MER L L N ++ RL EA +I M D+ P
Sbjct: 414 LCREGKLNAALEIRDD-MERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTP 472
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF + L +++ + + + G P Y L+ + +K GR +G +
Sbjct: 473 NAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIY 532
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ ++ N +DC K ++ + RE+ P+ +++ LI G K
Sbjct: 533 KEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKA 592
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++T EL + E G D +N++ID C++ + A L EM G PP +TY
Sbjct: 593 GLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTY 652
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+I L I + + LF++ +++ I ++ +++LI F ++ +I++A ++
Sbjct: 653 GSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQ 712
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL P+ ++++ L+ AL+K+ +EA F SM+ C P+ T ++++ L + +F +
Sbjct: 713 KGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNK 772
Query: 484 A 484
A
Sbjct: 773 A 773
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 215/491 (43%), Gaps = 1/491 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y +I AL + D + F QM + + + LI R G VD AL L
Sbjct: 193 PAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSL 252
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M+ ++ Y + ID F A +V ++ MK + P++ T S++ + +
Sbjct: 253 LDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCK 312
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+A EL + + + NT++ + EA +L + +G +P
Sbjct: 313 ANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIA 372
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ +TCL + E I + +KR P TY +L++ L + G+ + +
Sbjct: 373 YNCILTCLGKKRRVEEALRIFEE-MKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDME 431
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ L NV + N++ID CK ++ A I M D+ PN VTF++LI G K V
Sbjct: 432 RAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVD 491
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
L +L+CG P + S+I + R ED EMV G P+ N +
Sbjct: 492 DAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYM 551
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+ G+ + LF+++ A PD +++ LI + + + F++M G
Sbjct: 552 DCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCV 611
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
D +Y+A+I KSG+ ++A Q M+ G P T +++ L + R +EA+ +
Sbjct: 612 LDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYML 671
Query: 488 VKTSKERGISF 498
+ +K GI
Sbjct: 672 FEEAKSNGIKL 682
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 182/414 (43%), Gaps = 44/414 (10%)
Query: 114 NEATVRSLVHGVFRCL-DPHKAFELLIRFMEREPLTQKLVC----NTLLYRLSNNSMASE 168
E + LV GV + L D + A F E T+K+ C N+LL ++ N+
Sbjct: 87 GEKPLPELVIGVLKRLKDANTAVNY---FQWAEKQTEKVHCPEAYNSLLMVMARNTEFDH 143
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
IL +M G+ P S+ V V L E I+ T K +P FS Y +L+
Sbjct: 144 LERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIG 203
Query: 229 AL-----------------------------------YKAGRDVEGDRYLNHVFKDRLVS 253
AL + GR L+ + + L +
Sbjct: 204 ALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDA 263
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
++ YN+ IDCF K +D + + EM+ + P+ VT+ ++I CK + + EL
Sbjct: 264 DIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELF 323
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
L + P + +N+MI A +F++A L G P+ I YN ++ L
Sbjct: 324 EQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKK 383
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
V +LR+F++M+ D + P++ T+N LI CR K+ A + M GL P+ +
Sbjct: 384 RRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTV 442
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+ +I L K+ + +EA F M+ C P++ T + +++ L + GR ++A+ +
Sbjct: 443 NIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSL 496
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 111/239 (46%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+YN ++ + D I EM P+ L++ K ++ + +++ +
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
+ F+P + +I L + L +M E G N + LIR G V
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+L L +M+++ + DI +N I F + K++ + K F M + GL PD+ +Y+++
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
I L K+ R DEA + F +EQN P +Y N ++ G+F+EA+ +++ K +G
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 365
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 48/105 (45%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+T Y +I L K+ +I A F + + PD +YN +I G+ +
Sbjct: 783 LGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMD 842
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
A L ++ G + T +L+D A+ + + V ++KE
Sbjct: 843 AYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKE 887
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 238/490 (48%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P +N ++D+ K A ++ + +PD T NILI+ C +G +
Sbjct: 56 TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++ ++ GY P+ T LI G C +V + + + + N+ + +L++GV
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVC 175
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ D A + L + R ++ NT++ + + SEA + +M +G +
Sbjct: 176 KIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVV 235
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + L E G+L+ + + + P TY +L++AL K G+ E L +
Sbjct: 236 TYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K + +V +Y+ ++D + V + +A + M + P++ T+ LI+G CK+ V
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMV 355
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ L + + P T++S+ID LC++ R D + EM + G P + ITY+ L
Sbjct: 356 DEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSL 415
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I LC G + R++ LF KM+ I P+I+TF L+ C+ +++ A++ F +LT G
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 475
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+ ++Y+ +I K G +EA ME NGC P+++T I+ L ++ ++A
Sbjct: 476 HLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEK 535
Query: 487 IVKTSKERGI 496
+++ RG+
Sbjct: 536 LLRQMIARGL 545
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 138/320 (43%), Gaps = 43/320 (13%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P+ YN ++DAL K + A M KPD TY+ L+ G + V +A
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQ 324
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M +G P+V+TYTILI+GFC K V E + + M ++N+ P T SL+ G+
Sbjct: 325 HVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ ++L+ +R + ++L+ L N A A+ KM D
Sbjct: 385 CKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKD------- 437
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+ ++P T+ +L++ L K GR +
Sbjct: 438 ----------------------------QEIRPNIFTFTILLDGLCKGGRLKDAQE---- 465
Query: 246 VFKDRLVS----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
VF+D L NV +YN++I+ CK +++ A + +M D PN TF T+I
Sbjct: 466 VFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALF 525
Query: 302 KDAEVHKTRELLVMLLECGF 321
K E K +LL ++ G
Sbjct: 526 KKDENDKAEKLLRQMIARGL 545
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 96/216 (44%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S +G++P Y +I+ K+ +D A F++M P TY+ LI G+C+ G
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ L+ +M G +V TY+ LIDG C + + MK++ + PN T
Sbjct: 390 ISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTI 449
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G+ + A E+ + + N ++ + EA +L KM D G
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNG 509
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
+P + TF+ + L + ++ +L I RG+
Sbjct: 510 CIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P FN ++D + + A+ + G+ P+ IT NILI C +G + +
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
K+ PD T N LI+ C +++KA +L G + + SY+ LI + K
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G A + ++ PD N I++ + + EA+ + +GIS
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGIS 231
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+DA+ + M+ P I +N ++ S + + ++ L +++ I PD+ T N L
Sbjct: 41 DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
I FC M +I +L G PD + + LIK L G+ +A
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKA 148
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
+I +V ++ F +M R +P I FN ++ SF +M A + G++PD
Sbjct: 36 SIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLI 95
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA---HD 486
+ + LI G+ + + G PD+ T N +++ L +G+ ++A HD
Sbjct: 96 TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHD 153
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 144/535 (26%), Positives = 251/535 (46%), Gaps = 43/535 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P Y VI+ K D AY + +M + PD TY+ +I +C+ +D+A
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ M G PN TY ++ G+C++++ E L+ M+ V P+ T SL+
Sbjct: 251 MEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDY 310
Query: 125 V---FRCLDPHKAFELLI-RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ R + K F+ + R +E + T C TLL + E A+L M G
Sbjct: 311 LCKNGRSTEARKIFDSMTKRGLEPDIAT---YC-TLLQGYATKGALVEMHALLDLMVRNG 366
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ F+ + ++E + + G+ P TY ++ L K+G +
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM 426
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
Y + + L N+ Y +I C + D+A E+ EM DR I N + FN++I H
Sbjct: 427 LYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSH 486
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ V ++ +L +++ G KP+ T++++ID C A + ++A LS M G+ P+
Sbjct: 487 CKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDC 546
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ----------------- 403
+TYN LI C + + +L LF++M + +SP+I T+N ++Q
Sbjct: 547 VTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVG 606
Query: 404 ------------------SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
C+ N ++A + F ++ L+ + +++ +I AL+K GR
Sbjct: 607 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 666
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
DEAK F ++ NG PD T +L+ E L++QG EE D+ + +E G + S
Sbjct: 667 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANS 721
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 232/468 (49%), Gaps = 6/468 (1%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM---EGLGYAPN 79
S+++D+ + ++S C PD F+ IL+ G+C EAL L+ M G G AP+
Sbjct: 139 SDAMDIVLRRMTELS---CMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPD 195
Query: 80 VYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLI 139
V +YT +I+GF + + M +R + P+ T S++ + + KA E+L
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLT 255
Query: 140 RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL 199
++ + + N++L+ ++ EA L+KM G P+ T++ + L
Sbjct: 256 TMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNG 315
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
E I D+ KRG++P +TY L++ G VE L+ + ++ + + + +N
Sbjct: 316 RSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFN 375
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
++I + K +D A + +MR + PN+VT+ +I CK V +++
Sbjct: 376 ILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDE 435
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G P+ + S+I LC +++ A + + EM++ G+ NTI +N +I S C G V S
Sbjct: 436 GLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIES 495
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+LF M + P++ T++ LI +C K+++A K SM ++G++PD +Y+ LI
Sbjct: 496 EKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLING 555
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+ R D+A F M +G +P+ T N+IL+ L R A ++
Sbjct: 556 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 603
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 135/533 (25%), Positives = 235/533 (44%), Gaps = 41/533 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP Y+++I AL K ++D A M + P+ TYN ++HG C EA+
Sbjct: 227 ISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAI 286
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+K+M G P+V TY L+D C R E ++ + M +R + P+ AT +L+ G
Sbjct: 287 GFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGY 346
Query: 126 FR---CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
++ H +L++R V N L+ + EA + KM G
Sbjct: 347 ATKGALVEMHALLDLMVR---NGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLN 403
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY----------- 231
P T+ + L +++ + I G+ P Y L+ +L
Sbjct: 404 PNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEEL 463
Query: 232 ------------------------KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
K GR +E ++ + + + + NV +Y+ +ID +C
Sbjct: 464 ILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCL 523
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
MD AT++ M + P+ VT+NTLI+G+C+ + + L ++ G P+ T
Sbjct: 524 AGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 583
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+N ++ L R A + + + G TYNI++ LC +LR+FQ +
Sbjct: 584 YNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 643
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ + TFN +I + ++ + ++A+ F ++ GL PD +YS + + LI+ G +
Sbjct: 644 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLE 703
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
E FLSME+NGC +S N I+ L+Q+G A + E+ S ++
Sbjct: 704 ELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEKHFSLEA 756
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 164/347 (47%), Gaps = 9/347 (2%)
Query: 160 LSNNSMASEAAAILR-----KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
L++ + S AAA+ R + G P T+ + C L+ L +K+
Sbjct: 57 LADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKK 116
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G + T+ L++ L R + D L + + + +V S +++ C N
Sbjct: 117 GFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQE 176
Query: 274 ATEICREM---RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
A E+ M R AP++V++ T+I+G K+ + K +L+ PD T++S
Sbjct: 177 ALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSS 236
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I LC+ + A++ L+ MV+ GV PN +TYN ++ C+ ++ +KM++D
Sbjct: 237 IIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDG 296
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ PD+ T+N+L+ C+ + +A K F SM GL PD +Y L++ G E
Sbjct: 297 VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMH 356
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M +NG +PD + N+++ +Q + +EA + ++ G++
Sbjct: 357 ALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLN 403
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 93/231 (40%), Gaps = 35/231 (15%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ Y+ +ID + +D A M KPD TYN LI+G CR+ +D+
Sbjct: 505 IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDD 564
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L K+M G +PN+ TY I++ G + +R A
Sbjct: 565 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA-------------------------- 598
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
A EL + + + N +L+ L N++ EA + + +
Sbjct: 599 ---------AAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 649
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
E+ TF+ + L+ +E + G+ P TY L+ E L + G
Sbjct: 650 ETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 700
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 224/451 (49%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
+YNI+IH +C++G + EA L+ ME GY P+V +Y+ +++G+C + +V++++E+M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
K + + PN S++ + R +A E + + L +V TL+
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
A+ +M R P+ T+ ++ D+ E + +G++P T+ L
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ KAG + R NH+ + NV +Y +ID CK +D A E+ EM +
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN+ T+N++++G CK + + +L+ G D T+ +++D C++ + A +
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L EM+ G+ P +T+N+L+ C G + +L M A I+P+ TFN+L++ +C
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
N ++ A + M + G+ PD +Y L+K K+ EA F M+ G +
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T +++++ +++ +F EA ++ + G++
Sbjct: 668 TYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/477 (24%), Positives = 214/477 (44%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ + YN VI + + I A+ M + PD +Y+ +++G CR G +D+
Sbjct: 240 VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDK 299
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+L++ M+ G PN Y Y +I C ++AE M + + P+ +L+
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + D A + R+ L ++ EA + +M +G P
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+S TF + + + + + I+ G P TY L++ L K G + L
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ ++K L N+ +YN +++ CK ++ A ++ E + + VT+ TL+ +CK
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E+ K +E+L +L G +P TFN +++ C ED L+ M+ G+ PN T+
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L++ C ++ + +++ M + + PD T+ L++ C+ +++A F M
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
G +YS LIK +K +F EA++ F M + G D + +T + R
Sbjct: 660 KGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 716
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 138/244 (56%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV SYN+VI C++ + A + M + P++++++T+++G+C+ E+ K +L+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++ G KP+ + + S+I LCR + +A + SEM+ G+ P+T+ Y LI C
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
GD+ + + F +M + I+PD+ T+ A+I FC++ + +A K F M GL PD+ ++
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ LI K+G +A + M Q GC+P+ T +++ L ++G + A++++ +
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 494 RGIS 497
G+
Sbjct: 485 IGLQ 488
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 162/384 (42%), Gaps = 35/384 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P T +Y +ID K I A F +M PD TY +I G C+IG + EA
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L +M G P+ T+T LI+G+C A + + FRV M + PN T +L+ G
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + D A ELL + N+++ L + EA ++ + G +
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T+ + ++++ IL + +G++P T+ +LM G +G++ LN
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP------NLV------- 291
+ + N ++N ++ +C N + AT I ++M R + P NLV
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 292 ----------------------TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
T++ LI G K + + RE+ + G DK F+
Sbjct: 646 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Query: 330 SMIDCLCRAHRFEDALDCLSEMVE 353
D + R + +D + E++E
Sbjct: 706 FFSDTKYKGKRPDTIVDPIDEIIE 729
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 124/280 (44%), Gaps = 11/280 (3%)
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI-----DC 264
T+ G PR + + + L G E R + LV +V+S N+ + DC
Sbjct: 167 TYKDWGSDPR--VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC 224
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
+ A + RE + + N+ ++N +I C+ + + LL+++ G+ PD
Sbjct: 225 YKTAT----AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD 280
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
+++++++ CR + + M G+ PN+ Y +I LC I +A + F
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS 340
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+M I PD + LI FC+ I A K F+ M + + PD +Y+A+I + G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
EA + F M G PDS T ++ + G ++A
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR-MNKI 411
+WG P +++ + L G + + R+F+KM + + + N + + K
Sbjct: 170 DWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 227
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
A F +G+ + SY+ +I + + GR EA L ME G PD + + +
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 472 LETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ + G ++ +++ K +G+ S+
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSY 317
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 141/529 (26%), Positives = 239/529 (45%), Gaps = 39/529 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN ID L K+ +D A+ ++M +C P TY L+ G+ + G +DEA
Sbjct: 71 GCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEA 130
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +++QM G +P + TYT++IDG A RV E R+ M P+ +L+ G
Sbjct: 131 MAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISG 190
Query: 125 VFRCLDPHKAFELLIRFMER------EP------LTQKLVC------------------- 153
+ + +A L + +E EP L + +C
Sbjct: 191 LAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSL 250
Query: 154 -------NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
N L+ L EA A ++KM +R P T+ V + L+E
Sbjct: 251 DLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALL 310
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
L ++RG P TY +++ L K GR EG + + + +Y +ID F
Sbjct: 311 QLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFM 370
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K M+ +A + R+M + VT+N ++ G CK V + + + E G
Sbjct: 371 KAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVV 430
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+++++D C A++ M++ G PN ++YNI+IR LC G +A++ F+K+
Sbjct: 431 TYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKL 490
Query: 387 QADRISPDIYTFNALIQSFC-RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
R+ PD+YTFN+ + C R++ + + F SM++ G P+ SYS L+ + ++G
Sbjct: 491 LQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGG 550
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
+ + F M G PD N ++ L GR +EA ++ + + R
Sbjct: 551 LEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERR 599
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 138/501 (27%), Positives = 225/501 (44%), Gaps = 40/501 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP+ + Y VID L K+ ++ A F M + C+PD F Y LI G+ +IG +DEA
Sbjct: 141 GNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEA 200
Query: 65 LRLVKQME----GLGYAPNV----------------------------------YTYTIL 86
L + QM G P+V +T+ L
Sbjct: 201 LVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPL 260
Query: 87 IDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREP 146
+ C A+R E ++ M ER P T SLV G + +A L +ER
Sbjct: 261 VAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGF 320
Query: 147 LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
+ + +++ L E +M +RGY P++ T+ + + + +
Sbjct: 321 IPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHR 380
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+ ++ G TY ++++ L KAGR E + + V+ V +Y+ ++D FC
Sbjct: 381 VYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFC 440
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
+ A E+ R M DR PNLV++N +I G C+ ++ K LL+ PD +
Sbjct: 441 SEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVY 500
Query: 327 TFNSMIDCLC-RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
TFNS + LC R D ++ MV G PN +Y+IL+ +C G + +L +F +
Sbjct: 501 TFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHE 560
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M + ++PD+ FN LI+ C ++++A + F L PD +SY +L+ AL + R
Sbjct: 561 MVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRE-LERRSAPDAWSYWSLLDALSRCER 619
Query: 446 FDEAKQTFLSMEQNGCNPDSY 466
+EA+ M+ GC P Y
Sbjct: 620 MEEARLLSFHMKLQGCAPRHY 640
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 218/490 (44%), Gaps = 43/490 (8%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
TR+ A+++ L K+ +D A L +M C PD + ++I+G+CR +DEA +++
Sbjct: 9 TRVCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLE 65
Query: 70 QMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
+ G P+ TY + IDG C A+RV + F++L+ M E+ P T +LV G+
Sbjct: 66 RAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLL--- 122
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
KA L EA AIL +M ++G P T+
Sbjct: 123 ---KAGRL-----------------------------DEAMAILEQMVEKGNSPTLKTYT 150
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
+ L + E I + G +P Y L+ L K G+ E YLN + ++
Sbjct: 151 VVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVEN 210
Query: 250 RLVSNVNS----YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
V +N+VI C ++ A E+ D + TFN L++ CK
Sbjct: 211 GCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDD-SLDLTHFTFNPLVAALCKAER 269
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + + E P FT+ S++D + R ++AL L E VE G P+ +TY
Sbjct: 270 TEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTS 329
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+I LC +G V F +M+ PD T+ ALI F + I KA + + ML G
Sbjct: 330 IIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSG 389
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+Y+ ++ L K+GR EA TFL+ME+ GC T + +++ +G A
Sbjct: 390 TVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAV 449
Query: 486 DIVKTSKERG 495
++ + +RG
Sbjct: 450 ELFRRMLDRG 459
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L+ LC G + R++ L +M SPD+ F +I CR ++++A + G
Sbjct: 15 LLNGLCKTGQLDRAMLLLDEMPC---SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAG 71
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
PD +Y+ I L K+ R D+A Q M++ C P + T +++ L++ GR +EA
Sbjct: 72 CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAM 131
Query: 486 DIVKTSKERGIS 497
I++ E+G S
Sbjct: 132 AILEQMVEKGNS 143
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 147/531 (27%), Positives = 245/531 (46%), Gaps = 35/531 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y+++ID L K+ +++ A Q M P+ TYNI+I G C +G ++EA
Sbjct: 233 GFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEA 292
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+RL+K+M G G P+V TY +LI +C R AE V + M + PN L+HG
Sbjct: 293 VRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHG 352
Query: 125 ---------VFRCLD---------PHKAFELLIRFMEREPLTQKLVC------------- 153
V LD H+AF +LI + K +
Sbjct: 353 YATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPD 412
Query: 154 ----NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+T+++ L +A +M G P +F + L + + + +
Sbjct: 413 VVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAF 472
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
I RG+ P +M+ L K GR VE + + V + NV SYN +ID +C V
Sbjct: 473 EMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVG 532
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
MD + + M + P+ T+N L++G+ K+ V L + K T N
Sbjct: 533 KMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSN 592
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++ L +A R A + +MV+ G TYN ++ LC V +LR+F+ +++
Sbjct: 593 IILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSK 652
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
D++TFN +I + ++ +I++A+ F +M+ G P +YS +IK+ I+ G +E+
Sbjct: 653 EFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEES 712
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
FLSME+NGC DS+ N+I+ L+++G A + E+ S ++
Sbjct: 713 DDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEA 763
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 126/497 (25%), Positives = 237/497 (47%), Gaps = 8/497 (1%)
Query: 11 RLYNAVIDALVKS-----NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
R+ N ++ L+K + D + F++M PD F+YN LI G+C EAL
Sbjct: 126 RVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEAL 185
Query: 66 RLVKQME---GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
L+ M G +PNV +Y+ +IDGF V + + + + M + P+ T SL+
Sbjct: 186 ELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLI 245
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + +KA +L ++ + N ++ + EA +L+KM G
Sbjct: 246 DGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQ 305
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ T+ + E + D+ +++G KP + Y +L+ G ++
Sbjct: 306 PDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDL 365
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L+ + +D + ++N++I + K +D+A EMR + P++V+++T+I CK
Sbjct: 366 LDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCK 425
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
V ++ G P+ +F S+I LC ++ + EM+ G+ P+ I
Sbjct: 426 IGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIF 485
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
N ++ +LC G V + F + + P++ ++N LI +C + K++++ K F M+
Sbjct: 486 MNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMV 545
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
++GLRPD+++Y+AL+ K+GR ++A + M + + TSN+IL L Q GR
Sbjct: 546 SIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIV 605
Query: 483 EAHDIVKTSKERGISFK 499
A ++ +RG +
Sbjct: 606 AARELYMKMVDRGTQLR 622
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/537 (24%), Positives = 251/537 (46%), Gaps = 51/537 (9%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP+ Y+ +ID K +D AY F +M PD TY+ LI G+C+ +++A
Sbjct: 200 SPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEA 259
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH--- 123
+++ M G PN TY I+I G+C+ ++ E R+L+ M + P+ T L+
Sbjct: 260 ILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYC 319
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAI-LRKMGD---R 179
+ RC + F+ ++R ++ N+ +Y + + A++ A I +R + D R
Sbjct: 320 KIGRCAEARSVFDSMVRKGQKP--------NSTIYHILLHGYATKGALIDVRDLLDLMIR 371
Query: 180 GYLP-ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+P E F+ + +++ + G++P +Y ++ L K GR +
Sbjct: 372 DGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVED 431
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ N + + L N+ S+ +I C + + E+ EM +R I P+ + NT++
Sbjct: 432 AVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMD 491
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
CK+ V + ++ M++ G KP+ ++N++ID C + ++++ MV G+ P
Sbjct: 492 NLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRP 551
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKM--------------------QADRISPD---- 394
++ TYN L+ G V +L L+++M QA RI
Sbjct: 552 DSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELY 611
Query: 395 -----------IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
I T+N ++ C + +++A + F + + D ++++ +I AL+K
Sbjct: 612 MKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKV 671
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
GR DEAK F +M G P T +L++++ +++G EE+ D+ + ++ G + S
Sbjct: 672 GRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADS 728
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/539 (23%), Positives = 232/539 (43%), Gaps = 49/539 (9%)
Query: 9 STRLYNAVIDALVKSNSID-------LAYLKFQQMS---VDQCKPDRFTYNILIHGICRI 58
S +N+V+ + +++S LA F M+ V+ +R+ ILI C +
Sbjct: 48 SVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMMAANRYIIGILIRCFCTV 107
Query: 59 GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE----VFR------------- 101
G +D A +G+ T LI G C+ KR + VFR
Sbjct: 108 GRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFS 167
Query: 102 ----------------VLEIMKER------NVCPNEATVRSLVHGVFRCLDPHKAFELLI 139
LE++ N PN + +++ G F+ + KA+ L
Sbjct: 168 YNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFD 227
Query: 140 RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL 199
+ + + ++L+ L ++A AIL+ M D+G +P + T++ + +
Sbjct: 228 EMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLG 287
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
L E +L G++P TY+LL++ K GR E + + + N Y+
Sbjct: 288 QLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYH 347
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
+++ + + ++ M I FN LI + K V K + +
Sbjct: 348 ILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQN 407
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G +PD +++++I LC+ R EDA+ ++MV G+ PN I++ LI LC+IG+ +
Sbjct: 408 GLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKV 467
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
L +M I PD N ++ + C+ ++ +A+ F ++ +G++P+ SY+ LI
Sbjct: 468 EELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDG 527
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
G+ DE+ + F M G PDS+T N +L + GR E+A + + + + F
Sbjct: 528 YCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKF 586
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 179/402 (44%), Gaps = 8/402 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI R +N +I A K ++D A F +M + +PD +Y+ +IH +C+IG V++A
Sbjct: 373 GIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDA 432
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ QM G +PN+ ++T LI G C+ +V + M R + P+ + +++
Sbjct: 433 VYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDN 492
Query: 125 V---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ R ++ F+++I + + NTL+ E+ +M G
Sbjct: 493 LCKEGRVVEAQDFFDMVIHIGVKPNVVSY---NTLIDGYCFVGKMDESIKQFDRMVSIGL 549
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P+S T++ + + + + ++ VK T +++ L++AGR V R
Sbjct: 550 RPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAA-R 608
Query: 242 YLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L DR + +YN V+ C+ + +D A + ++R ++ ++ TFN +I+
Sbjct: 609 ELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINAL 668
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K + + + L ++ G P T++ MI E++ D M + G ++
Sbjct: 669 LKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADS 728
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
N++IR L GDV R+ K+ S + T LI
Sbjct: 729 HMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLI 770
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 111/259 (42%), Gaps = 35/259 (13%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ YN +ID +D + +F +M +PD +TYN L++G + G V++
Sbjct: 512 IGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVED 571
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L ++M FR K+ C + + ++H
Sbjct: 572 ALALYREM----------------------------FR-----KDVKFCAITSNI--ILH 596
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+F+ A EL ++ ++R + NT+L L NS EA + + + +
Sbjct: 597 GLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFEL 656
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF+ + L+ ++E + + RG P TY L++++ + G E D
Sbjct: 657 DVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLF 716
Query: 244 NHVFKDRLVSNVNSYNMVI 262
+ K+ ++ + N++I
Sbjct: 717 LSMEKNGCAADSHMLNVII 735
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 92/224 (41%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P + YNA+++ K+ ++ A +++M K T NI++HG+ + G +
Sbjct: 547 IGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVA 606
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L +M G + TY ++ G C V E R+ E ++ + + T +++
Sbjct: 607 ARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVIN 666
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +A L + R P+ + + ++ + E+ + M G
Sbjct: 667 ALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAA 726
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
+S + + L+ D+ L ++ ST LL+
Sbjct: 727 DSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLI 770
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR--------LFQKMQ---ADR 390
EDAL+ E++ P + +N ++ ++ A D + S R LF M +
Sbjct: 31 EDALNLFDELLPQARPASVHAFNSVL-TVVARADSSSSPRHSAALAVSLFNTMARSGVNM 89
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA- 449
++ + Y LI+ FC + +++ A AF L +G R N + + LIK L R D+A
Sbjct: 90 MAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAM 149
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
F M + G PD ++ N +++ L + + +EA +++
Sbjct: 150 DMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELL 188
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 224/485 (46%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGI VI++ N +D + ++ +PD T+ LI G+C G + E
Sbjct: 103 LGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGE 162
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L +M G G+ PN TY LI G C R+L M ++N PN T +++
Sbjct: 163 ALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIID 222
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+F+ ++A + + + N++++ L S A ++ +M D +P
Sbjct: 223 CLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMP 282
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
F V L + ++D I+RGV+P TY LM+ E D+
Sbjct: 283 NVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVF 342
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + NV SY+ +I+ +CK+ +D+A + EM R++ PN+VT+NTLI G C
Sbjct: 343 DTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHV 402
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ L ++ G PD T+ ++D LC+ + A+ L + + P+ +Y
Sbjct: 403 GRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSY 462
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI+I +C +G++ + LF + + + PD++T+ +I C + +A K F M T
Sbjct: 463 NIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNT 522
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G PD+ +Y+ + + +++ A Q M G + D+ T LI+E L G +
Sbjct: 523 DGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQS 582
Query: 484 AHDIV 488
I+
Sbjct: 583 VKQIL 587
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 225/464 (48%)
Query: 34 QQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNA 93
+QM D +T I+I+ C + VD ++ ++ LG+ P+ T+T LI G C
Sbjct: 98 KQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVE 157
Query: 94 KRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC 153
++ E + + M PN T +L+HG+ + + A LL +++ +
Sbjct: 158 GKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITY 217
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
NT++ L + +EA I +M +G P ST++ + L + +++ +
Sbjct: 218 NTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVD 277
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
+ P + L++AL K G ++ + + + +V +Y ++D C + MD
Sbjct: 278 SKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDE 337
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A ++ M + APN+++++TLI+G+CK + K L + + P+ T+N++I
Sbjct: 338 ADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIH 397
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
LC R DA+ EMV G P+ +TY IL+ LC + +++ + + ++ ++P
Sbjct: 398 GLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAP 457
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
DI ++N +I CR+ ++E A F S+ + GL PD ++Y+ +I L G EA + F
Sbjct: 458 DIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLF 517
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M +GC+PD T NLI ++ A +++ RG S
Sbjct: 518 REMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFS 561
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 211/475 (44%), Gaps = 39/475 (8%)
Query: 24 NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTY 83
N+ID A F +M Q P + ++ I + L L KQM+ LG +VYT
Sbjct: 53 NTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTL 112
Query: 84 TILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH--KAFELLIRF 141
I+I+ FC+ RV F VL + + P+ AT +L+ G+ C++ +A L +
Sbjct: 113 AIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGL--CVEGKIGEALHLFDKM 170
Query: 142 MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
+ + TL++ L + A +LR M + P T++ + CL +
Sbjct: 171 VGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQV 230
Query: 202 NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
NE I I +G+ P NV++YN +
Sbjct: 231 NEALNIFSEMIAKGISP-----------------------------------NVSTYNSI 255
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
I CK + + EM D I PN+V F TL+ CK+ V +++ ++++ G
Sbjct: 256 IHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGV 315
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
+PD T+ +++D C ++A MV G PN I+Y+ LI C I + +++
Sbjct: 316 EPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMY 375
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
LF++M + P+I T+N LI C + ++ A F M+ G PD +Y L+ L
Sbjct: 376 LFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLC 435
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
K+ D+A ++E + PD + N++++ + + G E A D+ + +G+
Sbjct: 436 KTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGL 490
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 74/175 (42%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P F ++ + + L +M G+P + T I+I S C + V +
Sbjct: 72 PSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSV 131
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
K+ PD TF LI+ C KI +A F M+ G +P+ +Y LI L K
Sbjct: 132 LAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCK 191
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G A + SM Q C P+ T N I++ L + + EA +I +GIS
Sbjct: 192 VGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGIS 246
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y ++D L K+ +D A + + PD +YNI+I G+CR+G ++ A
Sbjct: 419 GQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAA 478
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + G P+V+TYTI+I+G C +AE ++ M P++ T + G
Sbjct: 479 GDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRG 538
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
R + A +LL + R ++ LS++ + IL +
Sbjct: 539 FLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHE 589
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P Y +I+ L + A F++M+ D C PD TYN++ G R
Sbjct: 485 LSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNE 544
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID 88
A++L+++M G G++ + T T++++
Sbjct: 545 TLSAIQLLQEMLGRGFSADASTITLIVE 572
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 237/491 (48%), Gaps = 1/491 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS YN ++ L K ++ A F++M D P+ TYNILI +CR G ++ A
Sbjct: 120 GSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAA 178
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + ME G PNV T I+ID C A+++ E + E M ++ PN T SL+ G
Sbjct: 179 LEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDG 238
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +C A+ L + ++ + +V +L+ + I ++M G P+
Sbjct: 239 LGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPD 298
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + C+ + + + G P +Y +L+ L KAG E
Sbjct: 299 LTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFY 358
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + V + ++YN VID FCK +++A ++ EM+ + P +VT+ ++I G K
Sbjct: 359 AMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKID 418
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L G K + ++S+ID + R ++A + E+++ G+ PN T+N
Sbjct: 419 RLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 478
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ +L ++ +L FQ M+ + P+ T++ LI CR+ K KA + M L
Sbjct: 479 CLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKL 538
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL+P+ +Y+ +I L K+G EA F + NG PDS + N ++E L + +A
Sbjct: 539 GLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDA 598
Query: 485 HDIVKTSKERG 495
+ + + ++ +G
Sbjct: 599 YALFEETRLKG 609
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 219/466 (46%), Gaps = 3/466 (0%)
Query: 20 LVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPN 79
L K+N +D A F+Q+ ++ P + YN +I G G DEA L+++ + G P+
Sbjct: 65 LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124
Query: 80 VYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLI 139
V Y ++ +RV E R+ E MK R+ PN T L+ + R + A E+
Sbjct: 125 VIAYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNAALEIRD 183
Query: 140 RFMEREPL-TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTG 198
MER L L N ++ RL EA +I M D+ P + TF + L
Sbjct: 184 D-MERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKC 242
Query: 199 LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY 258
+++ + + + G P Y L+ + +K GR +G + + ++
Sbjct: 243 GRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLI 302
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
N +DC K ++ + RE+ P+ +++ LI G K ++T EL + E
Sbjct: 303 NTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKE 362
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
G D +N++ID C++ + A L EM G PP +TY +I L I +
Sbjct: 363 QGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDE 422
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+ LF++ +++ I ++ +++LI F ++ +I++A ++ GL P+ ++++ L+
Sbjct: 423 AYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 482
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
AL+K+ +EA F SM+ C P+ T ++++ L + +F +A
Sbjct: 483 ALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKA 528
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 187/434 (43%), Gaps = 11/434 (2%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV-FRCLDPH- 132
G+ P+ L+ ++++ E F +++ M++ P + L+ V L P
Sbjct: 5 GFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWV 64
Query: 133 --------KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+A EL + + + NT++ + EA +L + +G +P
Sbjct: 65 LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ +TCL + E I + +KR P TY +L++ L + G+ +
Sbjct: 125 VIAYNCILTCLGKKRRVEEALRIFEE-MKRDAVPNVPTYNILIDMLCREGKLNAALEIRD 183
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L NV + N++ID CK ++ A I M D+ PN VTF++LI G K
Sbjct: 184 DMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 243
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V L +L+CG P + S+I + R ED EMV G P+ N
Sbjct: 244 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLIN 303
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+ + G+ + LF+++ A PD +++ LI + + + F++M
Sbjct: 304 TYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQ 363
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G D +Y+A+I KSG+ ++A Q M+ G P T +++ L + R +EA
Sbjct: 364 GCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEA 423
Query: 485 HDIVKTSKERGISF 498
+ + + +K GI
Sbjct: 424 YMLFEEAKSNGIKL 437
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 48/105 (45%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+T Y +I L K+ +I A F + + PD +YN +I G+ +
Sbjct: 538 LGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMD 597
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
A L ++ G + T +L+D A+ + + V ++KE
Sbjct: 598 AYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKE 642
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 142/524 (27%), Positives = 231/524 (44%), Gaps = 35/524 (6%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN +I L +S +++ A+ ++M PD FTY L++G+C+ G + EA L+ +M
Sbjct: 283 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMS 342
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEA---------------- 116
G PNV Y L+DGF + AE F +L M V PN+
Sbjct: 343 CSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLG 402
Query: 117 -------------------TVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL 157
T L+ G F+ D AFELL L ++
Sbjct: 403 RASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMI 462
Query: 158 YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK 217
L N + EA +L +M G P + + + ++ C L+ K V
Sbjct: 463 NGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVL 522
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
P Y L++ L GR E + Y V K LV + +Y+ +I +CK +++A ++
Sbjct: 523 PDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQL 582
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
++M + + PN T+ L+ G+ K + K +L +L G KPD + +I L R
Sbjct: 583 LQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSR 642
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
+ E A L+E+ + G+ P+ Y+ LI LC + D+ +++ L +M + + P I
Sbjct: 643 SENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVC 702
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+NALI FCR I +A F S+L GL P+ +Y+ALI K+G +A + M
Sbjct: 703 YNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDML 762
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
G PD++ N++ E+A + + RG + S
Sbjct: 763 DRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSL 806
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 208/481 (43%), Gaps = 35/481 (7%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
T + + ++D K+ S+ A M P R N L+ + R ++ +L
Sbjct: 175 TAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKG 234
Query: 70 QMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
MEG G P+VYTY+ ++ C A+ +V E M+ R+ NE T ++ G+ R
Sbjct: 235 FMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR-- 292
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
+ EA +M D G P++ T+
Sbjct: 293 ---------------------------------SGAVEEAFGFKEEMVDYGLSPDAFTYG 319
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
+ L G L E +LD G+KP Y L++ K G+ E LN +
Sbjct: 320 ALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISA 379
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
+ N Y+ +I CK+ + RA+++ EM P+ T++ L+ GH + +
Sbjct: 380 GVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGA 439
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
ELL + G P+ +T+ MI+ LC+ ++A + L EM+ G+ PN Y LI
Sbjct: 440 FELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIG 499
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
G ++ + + M + PD++ +N+LI+ + +IE+AE+ + + GL PD
Sbjct: 500 HSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPD 559
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
F+YS LI K+ ++A Q M +G P++ T +LE + E+ I++
Sbjct: 560 EFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQ 619
Query: 490 T 490
+
Sbjct: 620 S 620
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/477 (23%), Positives = 221/477 (46%), Gaps = 2/477 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P T Y+ ++ + D A+ +M P+ +TY I+I+G+C+ G E
Sbjct: 414 VGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKE 473
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+++M G PN + Y LI G ++ LE M + NV P+ SL+
Sbjct: 474 AGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIK 533
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ +A E + +R + + + L++ +A +L++M + G P
Sbjct: 534 GLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKP 593
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ + D + IL + + G KP Y +++ L ++ L
Sbjct: 594 NADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVL 653
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
V K+ LV +++ Y+ +I CK+ M++A + EM + P +V +N LI G C+
Sbjct: 654 TEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRS 713
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + R + +L G P+ T+ ++ID C+ DA D +M++ G+ P+ Y
Sbjct: 714 GDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVY 773
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+L D+ ++L L ++M +R + F+ L++ FC+ ++++ EK M+
Sbjct: 774 NVLATGCSDAADLEQALFLTEEM-FNRGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMD 832
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS-NLILETLVQQG 479
+ P+ + +I K+G+ EA + F ++Q + S +L+ ++ +G
Sbjct: 833 REIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSLLFTDMINKG 889
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 191/416 (45%), Gaps = 8/416 (1%)
Query: 85 ILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIR---F 141
+L+D + V +V+ +M + + P R +G+ + L A EL+ + F
Sbjct: 180 VLVDTYKKNGSVRTAAQVVLMMGDLGLAP----TRRCCNGLLKDLLRADAMELVWKLKGF 235
Query: 142 MEREPLTQKLVCNTLLYRLSNNSMASEAAA-ILRKMGDRGYLPESSTFDYTVTCLVTGLD 200
ME + + + + +AA + +M R T++ ++ L
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 295
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
+ E G + + G+ P TY LM L K GR E L+ + L NV Y
Sbjct: 296 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYAT 355
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
++D F K A +I EM + PN + ++ LI G CK ++ + +LL +++ G
Sbjct: 356 LVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
+PD FT++ ++ + + + A + L+EM G+ PN TY I+I LC G+ +
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
L ++M ++ + P+ + + LI + I A ++ +M + PD F Y++LIK L
Sbjct: 476 NLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGL 535
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
GR +EA++ + +++ G PD +T + ++ + E+A +++ G+
Sbjct: 536 STVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGL 591
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 128/248 (51%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+V +Y+ ++ CK D A ++ EMR RD A N VT+N +ISG C+ V +
Sbjct: 244 DVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFK 303
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+++ G PD FT+ ++++ LC+ R ++A L EM G+ PN + Y L+
Sbjct: 304 EEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKE 363
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G A + + +M + + P+ ++ LI+ C++ ++ +A K M+ +G RPD F+Y
Sbjct: 364 GKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTY 423
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
L++ + D A + M +G P++YT +++ L Q G +EA ++++
Sbjct: 424 HPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMIS 483
Query: 494 RGISFKSF 501
G+ +F
Sbjct: 484 EGLKPNAF 491
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 66/142 (46%)
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
T ++L+ + G V + ++ M ++P N L++ R + +E K
Sbjct: 175 TAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKG 234
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M G+ PD ++YS ++A K+ FD AK+ F M + C + T N+++ L + G
Sbjct: 235 FMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 294
Query: 480 RFEEAHDIVKTSKERGISFKSF 501
EEA + + G+S +F
Sbjct: 295 AVEEAFGFKEEMVDYGLSPDAF 316
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 131/496 (26%), Positives = 228/496 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ Y VID L K+ +D A FQQM KPD TYN LIHG G E
Sbjct: 191 GIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEV 250
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++++++M G P+ TY +L+D C R E + M + + P+ A L+HG
Sbjct: 251 VQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHG 310
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ L + + + N + + +M EA I KM +G P+
Sbjct: 311 YATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPD 370
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+F + L +++ + I GV P + L+ L G+ + +
Sbjct: 371 VVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFF 430
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
V + + +N ++ C + A + M + PN++++NTL++GHC
Sbjct: 431 EVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTG 490
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + +LL +++ G KP++FT+ ++ C+A R +DA EM+ GV P TYN
Sbjct: 491 RIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYN 550
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++ L G + + L+ M R DIYT+N ++ C+ N +++A K F + +
Sbjct: 551 TILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSK 610
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ D+ +++ +I AL+K GR ++A F ++ G PD T LI E L+++G E
Sbjct: 611 DPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEF 670
Query: 485 HDIVKTSKERGISFKS 500
+ ++ G + S
Sbjct: 671 DGLFSAMEKSGTAPNS 686
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 226/484 (46%), Gaps = 11/484 (2%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
++L + DA + D+ L+ MS C PD YN +I+G R G V++A L
Sbjct: 129 SQLLKGLCDAKRVDEATDILLLR---MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFL 185
Query: 70 QMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
+M G PNV TYT +IDG C A+ V V + M +R V P+ T L+HG
Sbjct: 186 EMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTG 245
Query: 130 DPHKAFELL----IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ ++L +E + +T L LL L N EA M +G P+
Sbjct: 246 KWKEVVQMLEEMSTHGLEPDCITYAL----LLDYLCKNGRCREARLFFDSMFRKGIKPDV 301
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+ + + T L+E LD + GV P + ++ A K E N
Sbjct: 302 AIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNK 361
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + L +V S+ +ID CK+ +D A +M + + PN+ F++L+ G C +
Sbjct: 362 MRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGK 421
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
K EL +L+ G D FN+++ LC R +A + M+ GV PN I+YN
Sbjct: 422 WEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNT 481
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L+ C G + + +L M ++ + P+ +T+ L++ +C+ +++ A F ML G
Sbjct: 482 LVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKG 541
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ P +Y+ ++ L ++GRF EA + +L+M + D YT N+IL L + +EA
Sbjct: 542 VTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAF 601
Query: 486 DIVK 489
+ +
Sbjct: 602 KMFR 605
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 222/484 (45%), Gaps = 36/484 (7%)
Query: 40 QCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV 99
+ P+ TY+ILI CR+G ++ + G+ NV + L+ G C+AKRV E
Sbjct: 85 KVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEA 144
Query: 100 FRVLEI-MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
+L + M E P+ ++++G FR KA+ L + M++ + T++
Sbjct: 145 TDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVID 204
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
L + A + ++M DRG P++ T++ + ++ E +L+ G++P
Sbjct: 205 GLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEP 264
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
TY LL++ L K GR E + + +F+ + +V Y +++ + +
Sbjct: 265 DCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFL 324
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
M ++PN FN + + K A + + + + + G PD +F ++ID LC+
Sbjct: 325 DLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKL 384
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF--------------- 383
R +DA+ ++M+ GV PN ++ L+ LC +G ++ LF
Sbjct: 385 GRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFF 444
Query: 384 -----------QKMQADR---------ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+ M+A R + P++ ++N L+ C +I++A K M++
Sbjct: 445 NTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVS 504
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL+P+ F+Y+ L++ K+ R D+A F M G P T N IL L Q GRF E
Sbjct: 505 NGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSE 564
Query: 484 AHDI 487
A+++
Sbjct: 565 ANEL 568
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/483 (21%), Positives = 222/483 (45%), Gaps = 3/483 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P Y ++D L K+ A L F M KPD Y IL+HG G
Sbjct: 257 MSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGA 316
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ E + M G G +PN + I+ + + E + M+++ + P+ + +
Sbjct: 317 LSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGA 376
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKL-VCNTLLYRLSNNSMASEAAAILRKMGDR 179
L+ + + A L M E +T + V ++L+Y L +A + ++ D+
Sbjct: 377 LIDALCKLGRVDDAV-LQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQ 435
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G ++ F+ + L + E ++D I+ GV+P +Y L+ GR E
Sbjct: 436 GICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEA 495
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ L+ + + L N +Y +++ +CK +D A + REM + + P + T+NT++ G
Sbjct: 496 AKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHG 555
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ + EL + ++ K D +T+N +++ LC+ + ++A + +
Sbjct: 556 LFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLD 615
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
++T+NI+I +L G ++ LF + A + PD+ T+ + ++ + + + F
Sbjct: 616 SVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFS 675
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+M G P++ +AL++ L+ G A +++ + ++ T+++++ +L +G
Sbjct: 676 AMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLI-SLYSRG 734
Query: 480 RFE 482
++
Sbjct: 735 EYQ 737
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 108/276 (39%), Gaps = 35/276 (12%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
+P+ +YN L+ G C G +DEA +L+ M G PN +TYTIL+ G+C A+RV + +
Sbjct: 473 RPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYS 532
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFR---------------------------------C 128
+ M + V P AT +++HG+F+ C
Sbjct: 533 LFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLC 592
Query: 129 LDP--HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ +AF++ R ++P + N ++ L +A + + G +P+
Sbjct: 593 KNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVV 652
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ L+ L E G+ K G P L+ L G YL +
Sbjct: 653 TYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKL 712
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
+ ++ +M+I + + A + + R
Sbjct: 713 DEKNFSLEASTTSMLISLYSRGEYQPHAKSLPEKYR 748
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 239/497 (48%), Gaps = 8/497 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P +N ++ L K N + + +M + PD FT +IL + +C + V EAL
Sbjct: 89 PPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAA 148
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ + GY PNV TYT LI G C R++E R+ M++ PN T +L+ G+ +
Sbjct: 149 MAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQ 208
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-------NTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + A +L + M + + C + ++ L EA + +M +G
Sbjct: 209 TGNVNIALKLH-KEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQG 267
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P+ ++ + +++ + D + +GV+P T+ +L++ L K G+ E
Sbjct: 268 MIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAK 327
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L + + +V N+ +YN +ID FC V ++ A E+ M + + P+ +++ TLI+G+
Sbjct: 328 KLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGY 387
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK +V + L +L+ G P+ T+ +++ L + + DA M +GV N+
Sbjct: 388 CKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANS 447
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
Y I + LC + ++ LF ++++ +I ++ LI C+ K+E A + F
Sbjct: 448 QIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEK 507
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+ GL+PD +Y+ +I K G+ D A F ME+NGC PD N +L + +
Sbjct: 508 LSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNK 567
Query: 481 FEEAHDIVKTSKERGIS 497
EE ++ ++ +S
Sbjct: 568 LEEVIKLLHKMVQKDVS 584
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 209/451 (46%), Gaps = 8/451 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y +I L + I A F +M C P+ TY LI G+C+ G V+ A
Sbjct: 156 GYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIA 215
Query: 65 LRLVKQM------EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
L+L K+M G+ P V TY+I+IDG C R E + E MK + + P+ +
Sbjct: 216 LKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISY 275
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMG 177
+L+HG F C + L M + + +V + L+ L +EA +L M
Sbjct: 276 STLIHG-FCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMI 334
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
RG +P T++ + DLN + + +G++P +Y L+ K +
Sbjct: 335 QRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVK 394
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E N + + NV +Y ++ + + A ++ M+ ++ N + +
Sbjct: 395 EAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFL 454
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G CK+ + + EL L FK + ++ +ID LC+A + E A + ++ + G+
Sbjct: 455 DGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQ 514
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P+ +TYNI+I C +G V + LF+KM+ + +PDI +N L+ FC NK+E+ K
Sbjct: 515 PDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKL 574
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
M+ + P+ S + ++ L K ++ +
Sbjct: 575 LHKMVQKDVSPNAASCTIVVDMLCKDEKYKK 605
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 175/374 (46%), Gaps = 6/374 (1%)
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+AF M P+ N LL L+ + S+ ++ +M G P+ T
Sbjct: 74 QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILA 133
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
CL ++E + ++RG P TY L++ L R E R + K
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDR------DIAPNLVTFNTLISGHCKDAEV 306
N +Y +I C+ ++ A ++ +EM + + P ++T++ +I G CK
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRE 253
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ +EL + G PD +++++I C A +++ + EMV+ GV P+ +T+++L
Sbjct: 254 DEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVL 313
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I +LC G V + +L + M I P++ T+N+LI FC + + A + F SM + GL
Sbjct: 314 IDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGL 373
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
PD SY+ LI K+ + EA + M Q G +P+ T +L+ L Q+G+ +A
Sbjct: 374 EPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKK 433
Query: 487 IVKTSKERGISFKS 500
+ K G+S S
Sbjct: 434 LFGVMKTYGVSANS 447
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 174/390 (44%), Gaps = 14/390 (3%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P Y+ +ID L K D A F++M PD +Y+ LIHG C G D++ L
Sbjct: 235 PGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHL 294
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+M G P++ T+++LID C +V E ++LE+M +R + PN T SL+ G
Sbjct: 295 FDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCM 354
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D + A EL + + ++ TL+ EA + +M G P +T
Sbjct: 355 VGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTT 414
Query: 188 FDYTVTCLVTGL-------DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ L+ GL D + G++ T+ GV Y + ++ L K E
Sbjct: 415 YG----TLLKGLFQKGKVGDAKKLFGVMKTY---GVSANSQIYGIFLDGLCKNDCLFEAM 467
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
N + N+ +Y+ +ID CK ++ A E+ ++ + P++VT+N +I G
Sbjct: 468 ELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGF 527
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK +V L + E G PD +N+++ C ++ E+ + L +MV+ V PN
Sbjct: 528 CKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNA 587
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+ I++ LC + + L K R
Sbjct: 588 ASCTIVVDMLCKDEKYKKFVDLLPKFPVQR 617
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 137/266 (51%), Gaps = 6/266 (2%)
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
++ + + + + + ++S+N ++ K+N + + EMR ++P+L T + L
Sbjct: 73 IQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSIL 132
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ C V + + +L G+ P+ T+ ++I LC HR +A M + G
Sbjct: 133 ANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGC 192
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQAD------RISPDIYTFNALIQSFCRMNK 410
PN +TY LI+ LC G+V +L+L ++M D P + T++ +I C++ +
Sbjct: 193 TPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGR 252
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
++A++ F M G+ PD SYS LI +G++D++K F M G PD T ++
Sbjct: 253 EDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSV 312
Query: 471 ILETLVQQGRFEEAHDIVKTSKERGI 496
+++TL ++G+ EA +++ +RGI
Sbjct: 313 LIDTLCKEGKVTEAKKLLEVMIQRGI 338
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 2/185 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G SP+ Y ++ L + + A F M + Y I + G+C+ + E
Sbjct: 406 VGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFE 465
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L +++ + N+ Y+ LIDG C A ++ + + E + + + P+ T ++H
Sbjct: 466 AMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIH 525
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G + A +L ME T ++ NTLL + E +L KM +
Sbjct: 526 GFCKVGQVDNA-NILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVS 584
Query: 183 PESST 187
P +++
Sbjct: 585 PNAAS 589
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 224/451 (49%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
+YNI+IH +C++G + EA L+ ME GY P+V +Y+ +++G+C + +V++++E+M
Sbjct: 691 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 750
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
K + + PN S++ + R +A E + + L +V TL+
Sbjct: 751 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 810
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
A+ +M R P+ T+ ++ D+ E + +G++P T+ L
Sbjct: 811 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 870
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ KAG + R NH+ + NV +Y +ID CK +D A E+ EM +
Sbjct: 871 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 930
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN+ T+N++++G CK + + +L+ G D T+ +++D C++ + A +
Sbjct: 931 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 990
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L EM+ G+ P +T+N+L+ C G + +L M A I+P+ TFN+L++ +C
Sbjct: 991 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 1050
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
N ++ A + M + G+ PD +Y L+K K+ EA F M+ G +
Sbjct: 1051 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 1110
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T +++++ +++ +F EA ++ + G++
Sbjct: 1111 TYSVLIKGFLKRKKFLEAREVFDQMRREGLA 1141
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 209/461 (45%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ + YN VI + + I A+ M + PD +Y+ +++G CR G +D+
Sbjct: 683 VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDK 742
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+L++ M+ G PN Y Y +I C ++AE M + + P+ +L+
Sbjct: 743 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 802
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + D A + R+ L ++ EA + +M +G P
Sbjct: 803 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 862
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+S TF + + + + + I+ G P TY L++ L K G + L
Sbjct: 863 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 922
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ ++K L N+ +YN +++ CK ++ A ++ E + + VT+ TL+ +CK
Sbjct: 923 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 982
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E+ K +E+L +L G +P TFN +++ C ED L+ M+ G+ PN T+
Sbjct: 983 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 1042
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L++ C ++ + +++ M + + PD T+ L++ C+ +++A F M
Sbjct: 1043 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 1102
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
G +YS LIK +K +F EA++ F M + G D
Sbjct: 1103 KGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 1143
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 138/243 (56%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV SYN+VI C++ + A + M + P++++++T+++G+C+ E+ K +L+
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++ G KP+ + + S+I LCR + +A + SEM+ G+ P+T+ Y LI C
Sbjct: 748 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 807
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
GD+ + + F +M + I+PD+ T+ A+I FC++ + +A K F M GL PD+ ++
Sbjct: 808 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 867
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ LI K+G +A + M Q GC+P+ T +++ L ++G + A++++ +
Sbjct: 868 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 927
Query: 494 RGI 496
G+
Sbjct: 928 IGL 930
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 162/384 (42%), Gaps = 35/384 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P T +Y +ID K I A F +M PD TY +I G C+IG + EA
Sbjct: 789 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 848
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L +M G P+ T+T LI+G+C A + + FRV M + PN T +L+ G
Sbjct: 849 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 908
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + D A ELL + N+++ L + EA ++ + G +
Sbjct: 909 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 968
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T+ + ++++ IL + +G++P T+ +LM G +G++ LN
Sbjct: 969 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 1028
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP------NLV------- 291
+ + N ++N ++ +C N + AT I ++M R + P NLV
Sbjct: 1029 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 1088
Query: 292 ----------------------TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
T++ LI G K + + RE+ + G DK F+
Sbjct: 1089 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 1148
Query: 330 SMIDCLCRAHRFEDALDCLSEMVE 353
D + R + +D + E++E
Sbjct: 1149 FFSDTKYKGKRPDTIVDPIDEIIE 1172
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 124/280 (44%), Gaps = 11/280 (3%)
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI-----DC 264
T+ G PR + + + L G E R + LV +V+S N+ + DC
Sbjct: 610 TYKDWGSDPR--VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC 667
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
+ A + RE + + N+ ++N +I C+ + + LL+++ G+ PD
Sbjct: 668 YKTAT----AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD 723
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
+++++++ CR + + M G+ PN+ Y +I LC I +A + F
Sbjct: 724 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS 783
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+M I PD + LI FC+ I A K F+ M + + PD +Y+A+I + G
Sbjct: 784 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 843
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
EA + F M G PDS T ++ + G ++A
Sbjct: 844 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 883
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR-MNKI 411
+WG P +++ + L G + + R+F+KM + + + N + + K
Sbjct: 613 DWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 670
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
A F +G+ + SY+ +I + + GR EA L ME G PD + + +
Sbjct: 671 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 730
Query: 472 LETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ + G ++ +++ K +G+ S+
Sbjct: 731 VNGYCRFGELDKVWKLIEVMKRKGLKPNSY 760
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 234/470 (49%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + + + K QM + + + ++ NILI+ +CR+ VD ++ +
Sbjct: 91 PSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSV 150
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LG P+ T+ LI+G CN ++ E + M +R PN + ++++G+ +
Sbjct: 151 LGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCK 210
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ A ++ + + + +T++ L + + ++A L +M +RG P T
Sbjct: 211 TGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFT 270
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ V LNE + + R V P T+ +L++ L K G E +
Sbjct: 271 YNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMT 330
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ + ++++YN ++D +C +M+ A ++ M + AP ++N LI+G+CK +
Sbjct: 331 EKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMD 390
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ + LL + PD T+++++ LC+ R ++AL+ EM +G PN +TY IL+
Sbjct: 391 EAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILL 450
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
C G + +L+L + M+ ++ P+I + LI+ K+E A++ F + G R
Sbjct: 451 DGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTR 510
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
PD +Y+ +IK L+K G DEA F ME +G P+S + N++++ +Q
Sbjct: 511 PDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQ 560
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 197/440 (44%), Gaps = 35/440 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGI P +NA+I+ L I A F +M +P+ +Y +I+G+C+ G
Sbjct: 157 LGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSM 216
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ + K+ME G PNV TY+ +ID C + V + L M ER + PN T S+VH
Sbjct: 217 AVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVH 276
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G CN +EA + ++M R +P
Sbjct: 277 G---------------------------FCNL--------GQLNEATRLFKEMVGRDVMP 301
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF V L ++E + +T ++GV+P STY LM+ E +
Sbjct: 302 NTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVF 361
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +SYN++I+ +CK MD A + EM + + P+ VT++TL+ G C+
Sbjct: 362 EIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQL 421
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ L + G P+ T+ ++D C+ ++AL L M E + PN + Y
Sbjct: 422 GRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHY 481
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
ILI + G + + LF K+ D PDI T+ +I+ + ++A F M
Sbjct: 482 TILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMED 541
Query: 424 LGLRPDNFSYSALIKALIKS 443
G P++ SY+ +I+ +++
Sbjct: 542 DGFLPNSCSYNVMIQGFLQN 561
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 151/303 (49%)
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ + + CL ++ + +L K G+ P T+ L+ L G+ E N +
Sbjct: 130 SLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEM 189
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K NV SY VI+ CK A ++ ++M PN+VT++T+I CKD V
Sbjct: 190 VKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLV 249
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ E L ++E G P+ FT+NS++ C + +A EMV V PNT+T+ IL
Sbjct: 250 NDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTIL 309
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ LC G V+ + +F+ M + PDI T+NAL+ +C + +A+K F M+ G
Sbjct: 310 VDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGC 369
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P SY+ LI KS R DEAK M NPD+ T + +++ L Q GR +EA +
Sbjct: 370 APGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALN 429
Query: 487 IVK 489
+ K
Sbjct: 430 LFK 432
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 161/366 (43%), Gaps = 39/366 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y+ +ID+L K ++ A +M P+ FTYN ++HG C +G ++EA
Sbjct: 228 GCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEA 287
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL K+M G PN T+TIL+DG C V+E V E M E+ V P+ +T +L+ G
Sbjct: 288 TRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDG 347
Query: 125 VFRCL-----DPHKAFELLIRF-------------------------------MEREPLT 148
CL + K FE++IR M + L
Sbjct: 348 Y--CLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALN 405
Query: 149 QKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGI 207
V +TL+ L EA + ++M G P T+ + L+E +
Sbjct: 406 PDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKL 465
Query: 208 LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
L + ++ ++P Y +L+E ++ AG+ + +F D ++ +Y ++I K
Sbjct: 466 LKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLK 525
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+ D A ++ R+M D PN ++N +I G ++ + L+ ++ F + T
Sbjct: 526 EGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLST 585
Query: 328 FNSMID 333
F ++D
Sbjct: 586 FQMLLD 591
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 127/243 (52%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+V + + F K +C +M + N+ + N LI+ C+ V + +L
Sbjct: 92 SVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVL 151
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ + G PD TFN++I+ LC + ++A++ +EMV+ G PN I+Y +I LC
Sbjct: 152 GKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKT 211
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G+ + ++ +F+KM+ + P++ T++ +I S C+ + A + M+ G+ P+ F+Y
Sbjct: 212 GNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTY 271
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
++++ G+ +EA + F M P++ T ++++ L ++G EA + +T E
Sbjct: 272 NSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTE 331
Query: 494 RGI 496
+G+
Sbjct: 332 KGV 334
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 130/298 (43%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+T + ++D L K + A L F+ M+ +PD TYN L+ G C +++EA
Sbjct: 299 VMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAK 358
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
++ + M G AP ++Y ILI+G+C ++R+ E +L M + + P+ T +L+ G+
Sbjct: 359 KVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGL 418
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ P +A L P + LL + EA +L+ M ++ P
Sbjct: 419 CQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNI 478
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+ + + L + G +P TY ++++ L K G E
Sbjct: 479 VHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRK 538
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ D + N SYN++I F + A + EM + + NL TF L+ +D
Sbjct: 539 MEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDLESQD 596
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 85/175 (48%)
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
+P F + + ++ + ++M + V N + NILI LC + V S+
Sbjct: 90 RPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVS 149
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
+ KM I PD TFNALI C KI++A + F M+ G P+ SY+ +I L
Sbjct: 150 VLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLC 209
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
K+G A F MEQNGC P+ T + I+++L + +A + + ERGI
Sbjct: 210 KTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGI 264
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/563 (24%), Positives = 257/563 (45%), Gaps = 73/563 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKP-DRFTYNILIHGICRIGVVDE 63
G+ P +A+ID ++ ID L+ + + V P + TYN+LIHG+C+ G +++
Sbjct: 328 GLKPDYNACSALIDGFMREGDID-EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEK 386
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++K M LG PN T+ +LI+G+C + +L+ M++RN+ P+ + ++++
Sbjct: 387 AAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMIN 446
Query: 124 GV-----------------FRCLDPHKA-FELLI-------RFMEREPLTQKLVC----- 153
G+ F L P+ + +LI R E L + C
Sbjct: 447 GLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAP 506
Query: 154 -----NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
N ++ LS EA+ L ++ RG P++ TF + + E
Sbjct: 507 DIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYF 566
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAG---------------------------------- 234
D + G+ P Y +L+ +KAG
Sbjct: 567 DEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKN 626
Query: 235 -RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
R E + + + + LV +V +Y+ +I FCK +++A E+ EM + IAPN+ +
Sbjct: 627 GRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIY 686
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
N L+ G CK ++ + R+L + E G +PD T+++MID C++ +A EM
Sbjct: 687 NALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS 746
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
GV P++ YN L+ C GD+ +++ LF++M + + +FN LI +C+ KI++
Sbjct: 747 KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQE 805
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A + F M+ + PD+ +Y+ +I K+G+ +EA F M++ D+ T ++
Sbjct: 806 ASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMY 865
Query: 474 TLVQQGRFEEAHDIVKTSKERGI 496
+ G+ E + + +G+
Sbjct: 866 GYNKLGQSSEVFALFEKMVAKGV 888
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 222/493 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+T Y + L ++ ++ A L F++M KPD + LI G R G +DE
Sbjct: 293 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 352
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LR+ M G N+ TY +LI G C ++ + +L+ M PN T L+ G
Sbjct: 353 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEG 412
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + +A ELL +R + + ++ L + S A +L KM G P
Sbjct: 413 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 472
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + + E +LD GV P Y ++ L KAG+ E YL
Sbjct: 473 VVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 532
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L + ++ I + K M A + EM D + PN + LI+GH K
Sbjct: 533 EIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAG 592
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + L G PD T ++ I L + R ++AL SE+ E G+ P+ TY+
Sbjct: 593 NLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYS 652
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C G+V ++ L +M I+P+I+ +NAL+ C+ I++A K F M
Sbjct: 653 SLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK 712
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL PD+ +YS +I KS EA F M G P S+ N ++ ++G E+A
Sbjct: 713 GLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKA 772
Query: 485 HDIVKTSKERGIS 497
++ + ++G +
Sbjct: 773 MNLFREMLQKGFA 785
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 135/524 (25%), Positives = 234/524 (44%), Gaps = 35/524 (6%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y ++ AL K+ + A +M P+ F Y+++I G+C++G +DEA+ L + M
Sbjct: 231 YTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMG 290
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G PN YTYTI+ G C AKR+ E E M++ + P+ +L+ G R D
Sbjct: 291 EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 350
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF---- 188
+ + + + N L++ L +AA IL+ M G P S TF
Sbjct: 351 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLI 410
Query: 189 ---------------------------DYTVTCLVTGL----DLNETCGILDTFIKRGVK 217
+ ++ GL DL+ +L+ G+K
Sbjct: 411 EGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK 470
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
P Y +L+ A GR E R L+ + + ++ YN +I C K M+ A+
Sbjct: 471 PNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 530
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
E++ R + P+ VTF I G+ K ++ + + +L+ G P+ + +I+ +
Sbjct: 531 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 590
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
A +AL + GV P+ T + I L G V +L++F +++ + PD++T
Sbjct: 591 AGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 650
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+++LI FC+ ++EKA + M G+ P+ F Y+AL+ L KSG A++ F M
Sbjct: 651 YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 710
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ G PDS T + +++ + EA + +G+ SF
Sbjct: 711 EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 754
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 110/496 (22%), Positives = 226/496 (45%), Gaps = 1/496 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++F G+ P+ +Y+ +I A I+ A MS PD F YN +I + + G
Sbjct: 464 MTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 523
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
++EA + +++G G P+ T+ I G+ ++ E + + M + + PN
Sbjct: 524 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 583
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L++G F+ + +A + R L C+ ++ L N EA + ++ ++G
Sbjct: 584 LINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 643
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P+ T+ ++ ++ + + D +G+ P Y L++ L K+G
Sbjct: 644 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 703
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + + L + +Y+ +ID +CK + A + EM + + P+ +N L+ G
Sbjct: 704 KLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGC 763
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ ++ K L +L+ GF +FN++ID C++ + ++A EM+ + P+
Sbjct: 764 CKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDH 822
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TY +I C G + + LF++MQ + D T+ +L+ + ++ + + F
Sbjct: 823 VTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEK 882
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ G++PD +Y +I A K EA + + G +L++ L ++
Sbjct: 883 MVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRED 942
Query: 481 FEEAHDIVKTSKERGI 496
EA ++ E G+
Sbjct: 943 LTEASKLLDEMGELGL 958
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 117/492 (23%), Positives = 218/492 (44%), Gaps = 1/492 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P YNA+I L K+ ++ A ++ KPD T+ I G + G + EA
Sbjct: 503 GVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEA 562
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G PN YT+LI+G A + E + + V P+ T + +HG
Sbjct: 563 AKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHG 622
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A ++ E+ + ++L+ +A + +M +G P
Sbjct: 623 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 682
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ V L D+ + D ++G++P TY +++ K+ E +
Sbjct: 683 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 742
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + YN ++ CK M++A + REM + A L +FNTLI G+CK
Sbjct: 743 EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSC 801
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + +L ++ PD T+ ++ID C+A + E+A EM E + +T+TY
Sbjct: 802 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYT 861
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ +G + LF+KM A + PD T+ +I + C+ + + +A K ++
Sbjct: 862 SLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 921
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ + LI AL K EA + M + G P N ++ + + G+ +EA
Sbjct: 922 GMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEA 981
Query: 485 HDIVKTSKERGI 496
+ + K G+
Sbjct: 982 TRVFEGVKSLGL 993
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 214/446 (47%), Gaps = 1/446 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ LY +I+ K+ ++ A F+++ PD T + IHG+ + G V EA
Sbjct: 573 GLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEA 632
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ +++ G P+V+TY+ LI GFC V + F + + M + + PN +LV G
Sbjct: 633 LKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDG 692
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + D +A +L E+ + +T++ + +EA ++ +M +G P
Sbjct: 693 LCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPH 752
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S ++ V D+ + + +++G S + L++ K+ + E +
Sbjct: 753 SFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQ 811
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +++ + +Y VID CK M+ A + +EM++R++ + VT+ +L+ G+ K
Sbjct: 812 EMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLG 871
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L ++ G KPD+ T+ +I C+ +A E+V G+ ++
Sbjct: 872 QSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHD 931
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI +LC D+ + +L +M + P + N L++SF K+++A + F + +L
Sbjct: 932 LLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSL 991
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAK 450
GL PD + L+ + ++A+
Sbjct: 992 GLVPDTTTLIDLVNGNLNDTDSEDAR 1017
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 211/492 (42%), Gaps = 49/492 (9%)
Query: 47 TYNILIHGICRIGVVDEALR-------------------LVKQMEGLGYAP--------- 78
++ILI R+G++DEA L+K + G
Sbjct: 160 VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGM 219
Query: 79 -------NVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
+VYTYT L+ C + RVL M E+ + PNE ++ G+ + D
Sbjct: 220 LDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDI 279
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA-----SEAAAILRKMGDRGYLPESS 186
+A EL +R + LV NT Y + + +EA +M G P+ +
Sbjct: 280 DEAVEL-----KRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYN 334
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ + D++E I D + G+ TY +L+ L K G+ + L +
Sbjct: 335 ACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGM 394
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG--HCKDA 304
N ++ ++I+ +C+ + M RA E+ EM R++ P+ V++ +I+G HCKD
Sbjct: 395 VTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDL 454
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +LL + G KP+ ++ +I R E+A L M GV P+ YN
Sbjct: 455 SL--ANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYN 512
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I L G + + ++Q + PD TF A I + + K+ +A K F ML
Sbjct: 513 AIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDH 572
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL P+N Y+ LI K+G EA F + G PD T + + L++ GR +EA
Sbjct: 573 GLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEA 632
Query: 485 HDIVKTSKERGI 496
+ KE+G+
Sbjct: 633 LKVFSELKEKGL 644
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 188/410 (45%), Gaps = 2/410 (0%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
G +P V+ ILID + + E V + K ++ + SL+ + +C
Sbjct: 155 GSSPVVFD--ILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELF 212
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
+++ ++ + L+ L A +L +M ++G P + +
Sbjct: 213 WKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEG 272
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
+ D++E + + ++G+ P TY ++ L +A R E + K L +
Sbjct: 273 MCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPD 332
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
N+ + +ID F + +D I M I NL+T+N LI G CK ++ K E+L
Sbjct: 333 YNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILK 392
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
++ G KP+ TF +I+ CR H AL+ L EM + + P+ ++Y +I LC
Sbjct: 393 GMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCK 452
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
D++ + +L +KM + P++ ++ LI ++ +IE+A + M G+ PD F Y+
Sbjct: 453 DLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYN 512
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
A+I L K+G+ +EA L ++ G PD+ T + + G+ EA
Sbjct: 513 AIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEA 562
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 150/313 (47%), Gaps = 1/313 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P + Y+ +ID KS ++ A+ F +M +P F YN L+HG C+ G +++A
Sbjct: 713 GLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKA 772
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L ++M G+A + ++ LIDG+C + ++ E ++ + M + + P+ T +++
Sbjct: 773 MNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDW 831
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A L ER + + +L+Y + +SE A+ KM +G P+
Sbjct: 832 HCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPD 891
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + +L E + D + +G+ + + + LL+ AL K E + L+
Sbjct: 892 EVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLD 951
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L ++ + N ++ F + MD AT + ++ + P+ T L++G+ D
Sbjct: 952 EMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDT 1011
Query: 305 EVHKTRELLVMLL 317
+ R L+ L+
Sbjct: 1012 DSEDARNLIKQLV 1024
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 73/136 (53%)
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ ++ILI S +G + + +F + D I + N+L++ + +E K +
Sbjct: 159 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNG 218
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
ML + D ++Y+ L+ AL K+G AK+ + M++ G NP+ + +L++E + Q G
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278
Query: 481 FEEAHDIVKTSKERGI 496
+EA ++ ++ E+G+
Sbjct: 279 IDEAVELKRSMGEKGL 294
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/492 (25%), Positives = 227/492 (46%), Gaps = 35/492 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P +N ++DA ++ + A M KP TYN ++ G+CR G+ D+A
Sbjct: 187 VFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAW 246
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ K+M+ G AP+V ++TILI GFC + E ++ + M+ R + P+ + L+ G+
Sbjct: 247 EVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI-GL 305
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
F + A A LR+M G +P+
Sbjct: 306 F----------------------------------ARRGKMDHAMAYLREMRCFGLVPDG 331
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+ + +++ + D + G P TY L+ L K R ++ + LN
Sbjct: 332 VIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNE 391
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + + ++ ++ +I +C +D+A ++ M ++ + P++VT+NTLI G C+ +
Sbjct: 392 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 451
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ K +L + P+ T++ +ID C + EDA L EM+ G+ PN +TYN
Sbjct: 452 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 511
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+I+ C G+V++ + QKM +++SPD+ T+N LI + + +K+ A K M
Sbjct: 512 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 571
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
++PD +Y+ LI G EA F M G PD YT ++ V G +EA
Sbjct: 572 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 631
Query: 486 DIVKTSKERGIS 497
+ +RG +
Sbjct: 632 QLHDEMLQRGFA 643
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 204/426 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN+V+ L +S D A+ F++M PD ++ ILI G CR+G ++EA
Sbjct: 221 GLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEA 280
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ K+M G P++ +++ LI F ++ L M+ + P+ ++ G
Sbjct: 281 LKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGG 340
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R A + + L + NTLL L +A +L +M +RG P+
Sbjct: 341 FCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPD 400
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + L++ + DT + + ++P TY L++ + + G + + +
Sbjct: 401 LCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWD 460
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N +Y+++ID C+ ++ A EM ++ I PN++T+N++I G+C+
Sbjct: 461 DMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSG 520
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V K ++ L ++ PD T+N++I + + DA L+ M + V P+ +TYN
Sbjct: 521 NVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYN 580
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI G+V + +F+KM A I PD YT+ ++I ++A + ML
Sbjct: 581 MLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 640
Query: 425 GLRPDN 430
G PD+
Sbjct: 641 GFAPDD 646
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 200/453 (44%), Gaps = 35/453 (7%)
Query: 79 NVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELL 138
N YT I++ +C A +V V+ M++R V P+ T +V FR D A L+
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 214
Query: 139 IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTG 198
+ + + N++L L + M +A + ++M D G P+ +F +
Sbjct: 215 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 274
Query: 199 LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY 258
++ E I RG+KP ++ L+ + G+ YL + LV + Y
Sbjct: 275 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 334
Query: 259 NMVIDCFCKVNMMDRATEI-----------------------CRE------------MRD 283
MVI FC+ +M A + C+E MR+
Sbjct: 335 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 394
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
R + P+L TF TLI G+C + ++ K +L +L +PD T+N++ID +CR +
Sbjct: 395 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 454
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A D +M + PN +TY+ILI S C G V + +M I P+I T+N++I+
Sbjct: 455 ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIK 514
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+CR + K +K M+ + PD +Y+ LI IK + +A + ME+ P
Sbjct: 515 GYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQP 574
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
D T N+++ G +EA I + +GI
Sbjct: 575 DVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGI 607
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 196/443 (44%), Gaps = 7/443 (1%)
Query: 54 GICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCP 113
G CR +V L G P + +LI + +++ E F ++ + V
Sbjct: 67 GACRREIVSSLL-------GSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPI 119
Query: 114 NEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAIL 173
A +L+ + R PH A + N +++ + A++
Sbjct: 120 PAAASNALLAALSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVI 179
Query: 174 RKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
+M R P+ T + V D ++D+ + +G+KP TY +++ L ++
Sbjct: 180 SEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRS 239
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
G + + + +V S+ ++I FC+V ++ A +I +EMR R I P+LV+F
Sbjct: 240 GMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSF 299
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
+ LI + ++ L + G PD + +I CRA DAL EMV
Sbjct: 300 SCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVG 359
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
G P+ +TYN L+ LC + + L +M+ + PD+ TF LI +C K++K
Sbjct: 360 CGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDK 419
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A + F +ML LRPD +Y+ LI + + G D+A + M P+ T +++++
Sbjct: 420 ALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILID 479
Query: 474 TLVQQGRFEEAHDIVKTSKERGI 496
+ ++G+ E+A + +GI
Sbjct: 480 SHCEKGQVEDAFGFLDEMINKGI 502
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 238/498 (47%), Gaps = 8/498 (1%)
Query: 7 SPSTRLYNAVIDALVK-SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+P +N ++ A+ K D+ L +++MS+ PD T NILI+ C + VD L
Sbjct: 89 TPPISSFNTLLGAVAKIKRYFDVISL-YKRMSLIGLAPDFITLNILINCYCNLNKVDFGL 147
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
++ +M G++PN T+T L+ G C R++E +L M PN T +L++G+
Sbjct: 148 AVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGL 207
Query: 126 FRCLDPHKAFELLIRFMERE-----PLTQKLVCN-TLLYRLSNNSMASEAAAILRKMGDR 179
+ A +L + + LVC T++ L + + + + +M R
Sbjct: 208 CMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGR 267
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G P+ + + + G+ + + GV P T+ +L++AL KAG+ E
Sbjct: 268 GISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEA 327
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ L + + + +YN +ID FC +D A ++ M + I + V++N LI+G
Sbjct: 328 NHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLING 387
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+CK + + ++L ++ P T+N+++ L R + DA + EM + P
Sbjct: 388 YCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPE 447
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+ TYNIL+ LC ++ ++ LF ++ P I FN LI C+ KIE A + F
Sbjct: 448 SCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFN 507
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+ GL P+ +Y+ +I L KSG+ + AK FL ME+ GC P+ T N ++ Q
Sbjct: 508 RLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQND 567
Query: 480 RFEEAHDIVKTSKERGIS 497
++ ++++ E+ S
Sbjct: 568 EMQKVVELLQEMAEKDFS 585
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/507 (21%), Positives = 229/507 (45%), Gaps = 6/507 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S +G++P N +I+ N +D +M P+ T+ L+ G+C
Sbjct: 118 MSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSR 177
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN------VCPN 114
+ EA L+++M +GY PNV TY L++G C ++ E M N + PN
Sbjct: 178 ISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPN 237
Query: 115 EATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILR 174
+++ + + K EL + R + +++++ + + A +
Sbjct: 238 LVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFN 297
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
+M D G P TF+ + L + E +L I+RG P TY L++ G
Sbjct: 298 EMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEG 357
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
R + + + ++ SYN++I+ +CK M A ++ REM ++I P ++T+N
Sbjct: 358 RIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYN 417
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
TL++G ++ +V L + P+ T+N ++D LC+ + +A++ +
Sbjct: 418 TLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENH 477
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
P+ +N LI LC + + LF ++ + + P++ T+ +I C+ ++E A
Sbjct: 478 DFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENA 537
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
+ F M G P+ +++ L++ ++ + + M + +PD+ T +++++
Sbjct: 538 KDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDL 597
Query: 475 LVQQGRFEEAHDIVKTSKERGISFKSF 501
L + ++ E ++ T +G + + +
Sbjct: 598 LSKDEKYREYLHLLPTFPAQGQTGRGY 624
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 176/374 (47%), Gaps = 6/374 (1%)
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+AF + ++ +P NTLL ++ + ++ ++M G P+ T + +
Sbjct: 75 EAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILI 134
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
C ++ +L ++RG P T+ L++ L R E L + +
Sbjct: 135 NCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYR 194
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRD------IAPNLVTFNTLISGHCKDAEV 306
NV +Y +++ C A ++ EM + + I PNLV + T+I CKD +
Sbjct: 195 PNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLI 254
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
K +EL + + G PD ++S+I +C R+E A +EMV+ GV PN +T+N+L
Sbjct: 255 DKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVL 314
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I +LC G + + L + M SPD +T+N LI FC +I+ A F SM + G+
Sbjct: 315 IDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGI 374
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
D SY+ LI KSGR EAK+ + M P T N +L L ++G+ +A +
Sbjct: 375 ETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWN 434
Query: 487 IVKTSKERGISFKS 500
+ K ++ +S
Sbjct: 435 LFGEMKVHDLTPES 448
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 134/265 (50%), Gaps = 6/265 (2%)
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
NH+ + ++S+N ++ K+ + + M +AP+ +T N LI+ +C
Sbjct: 80 FNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCN 139
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+V +L +L G P+ TF S++ LC R +A L +MV G PN +T
Sbjct: 140 LNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVT 199
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADR------ISPDIYTFNALIQSFCRMNKIEKAEK 416
Y L+ LC G+ +++L ++M I P++ + +I S C+ I+K ++
Sbjct: 200 YGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKE 259
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
F M G+ PD +YS++I + +GR++ AK F M G +P+ T N++++ L
Sbjct: 260 LFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALC 319
Query: 477 QQGRFEEAHDIVKTSKERGISFKSF 501
+ G+ EEA+ ++K +RG S +F
Sbjct: 320 KAGKMEEANHLLKLMIQRGESPDTF 344
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/496 (25%), Positives = 245/496 (49%), Gaps = 10/496 (2%)
Query: 7 SPSTRLYNAVIDALVKSN------SIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+PS +N ++ ++VK+N +I L++ Q+ + P T+NIL++ C +G
Sbjct: 54 TPSIVEFNKILGSIVKANNNHYTTAISLSH----QLELKGITPTIVTFNILVNCYCHLGE 109
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A + ++ LGY P T+ LI+G C ++ E + + ++ + R+
Sbjct: 110 MTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRT 169
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L++G+ + + A ++L + + T ++ N ++ L + S+A + +M +
Sbjct: 170 LINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKR 229
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ TF+ + L E G+ + + + P T+ +L++AL K G
Sbjct: 230 ISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAK 289
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L + K ++ +V +Y+ ++D +C VN +++A + M +AP+ ++N +I+G
Sbjct: 290 NMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGL 349
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K V + L + G PD T+NS+ID LC+ R A + EM G+P +
Sbjct: 350 GKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADI 409
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TYN LI LC + +++ L +K++ I P +YT+N LI C+ +++ A+ F
Sbjct: 410 LTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQD 469
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+L G + ++Y+ +I L K G F+EA+ ME NG PD+ T I+ L ++
Sbjct: 470 LLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDE 529
Query: 481 FEEAHDIVKTSKERGI 496
E+A +++ RG+
Sbjct: 530 NEKAEKLLREMIIRGL 545
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 166/368 (45%), Gaps = 35/368 (9%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A +I K+ GY P + TF+ + + L E D I G +Y L+
Sbjct: 113 AFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLIN 172
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
L K G + L + + ++V YN++I+ CK + A ++ EM + I+P
Sbjct: 173 GLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISP 232
Query: 289 NLVTFNTLISGHC-----------------------------------KDAEVHKTRELL 313
++VTFN+LI G C KD + + + +L
Sbjct: 233 DVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNML 292
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++++ G PD T++S++D C + A S M GV P+ +YNI+I L I
Sbjct: 293 AVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKI 352
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
V +L LF++M I+PD T+N+LI C++ +I A + M G+ D +Y
Sbjct: 353 KMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTY 412
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
++LI L K+ D+A ++ G P YT N++++ L + GR + A D+ +
Sbjct: 413 NSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLI 472
Query: 494 RGISFKSF 501
+G S ++
Sbjct: 473 KGYSVNAW 480
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 125/241 (51%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
++N++++C+C + M A I ++ P +TFNTLI+G C + ++ + +
Sbjct: 96 TFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHV 155
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
+ GF D+ ++ ++I+ LC+ AL L ++ V + + YNI+I SLC V
Sbjct: 156 IALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAV 215
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+ + +L+ +M RISPD+ TFN+LI FC + ++++A F M+ + PD +++S L
Sbjct: 216 SDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSIL 275
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ AL K G AK M + G PD T + +++ +A + T G+
Sbjct: 276 VDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGV 335
Query: 497 S 497
+
Sbjct: 336 A 336
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 124/282 (43%), Gaps = 35/282 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y++++D N ++ A F MS P +YNI+I+G+ +I +VDEA
Sbjct: 299 GVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEA 358
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L K+M G AP+ TY LIDG C R++ +++++ M N P +
Sbjct: 359 LSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEM-HNNGIPADI-------- 409
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
L N+L+ L N +A A+++K+ D+G P
Sbjct: 410 --------------------------LTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPS 443
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L G L + + +G TY +++ L K G E + L+
Sbjct: 444 MYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLS 503
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ + ++ + +Y +I + + ++A ++ REM R +
Sbjct: 504 KMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGL 545
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 8/220 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S LG++P YN +I+ L K +D A F++M PD TYN LI G+C++G
Sbjct: 330 MSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGR 389
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A +LV +M G ++ TY LID C + + +++ +K++ + P+ T
Sbjct: 390 ISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNI 449
Query: 121 LVHGV---FRCLDPHKAFE-LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
L+ G+ R + F+ LLI+ T ++ N L + +EA +L KM
Sbjct: 450 LIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMING----LCKEGLFNEAEVLLSKM 505
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
+ G +P++ T++ + L + + +L I RG+
Sbjct: 506 ENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGL 545
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 2/177 (1%)
Query: 323 PDKFTFNSMIDCLCRAH--RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
P FN ++ + +A+ + A+ ++ G+ P +T+NIL+ C +G++ +
Sbjct: 55 PSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAF 114
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
+F K+ P TFN LI C K+++A ++ LG D SY LI L
Sbjct: 115 SIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGL 174
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
K G A Q +E N D N+I+ +L + +A+ + + IS
Sbjct: 175 CKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRIS 231
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 240/492 (48%), Gaps = 5/492 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP+ + V+ AL N +D A + M+ C P+ Y LIH + + V EA
Sbjct: 213 GVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEA 272
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L+++M +G P+V T+ +I G C ++ + ++++ M R P+ T L+HG
Sbjct: 273 LKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHG 332
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK-MGDRGYLP 183
+ R ++A ++LI+ P + NTL+ + EA + L + M + G+ P
Sbjct: 333 LCRIGKLNEARKILIKI----PCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQP 388
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + L L+ +++ +RG +P TY +L+ L KAG E L
Sbjct: 389 DIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVL 448
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + L N YN +I C+ + A + EM + P+L T+N+LI G CK
Sbjct: 449 HEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKV 508
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + L +L G + T+N++I L R F+ AL +++M+ G + ITY
Sbjct: 509 DRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITY 568
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI++ C +G++ + L L+++M D + D + N +I C++ K++ A + +
Sbjct: 569 NGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAIN 628
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G PD +Y++++ L K GR EA F ++ G PD++T N + ++G +
Sbjct: 629 RGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVND 688
Query: 484 AHDIVKTSKERG 495
A E G
Sbjct: 689 ACSFFYRGIENG 700
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 226/495 (45%), Gaps = 5/495 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ + Y+ V++ LV N +A F M P FT+ I++ +C VD A L
Sbjct: 181 PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSL 240
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ M G PN Y LI +V+E ++LE M P+ T ++HG+ +
Sbjct: 241 LRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCK 300
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
H A +L+ R + R + LL+ L +EA IL K+ P ++
Sbjct: 301 VNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAI 356
Query: 188 FDYTVTCLVTGLDLNETCGIL-DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ + V L E L +T I G +P TY +LM L K G +N +
Sbjct: 357 LNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEM 416
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ NV +Y ++++ CK +++ A + EM R + N V +N LI C+ +V
Sbjct: 417 SRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKV 476
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
H LL + G KPD FT+NS+I LC+ R ++A M+ G N +TYN L
Sbjct: 477 HVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTL 536
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I +L G ++L L M + D T+N LI++FC++ IEK + + M+ GL
Sbjct: 537 IHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGL 596
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
D S + +I L K G+ D A + G PD T N +L L + GR +EA +
Sbjct: 597 GADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALN 656
Query: 487 IVKTSKERGISFKSF 501
+ + G+ +F
Sbjct: 657 LFDRLQVEGVRPDAF 671
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 213/475 (44%), Gaps = 40/475 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P++ +Y +I AL + N + A ++M V C PD T+N +IHG+C++ + +A
Sbjct: 248 GCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDA 307
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+LV +M G+ P+ TY L+ G C ++ E ++L + CPN A + +L++G
Sbjct: 308 TKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILNTLING 363
Query: 125 VFRC--LDPHKAF--ELLIRF-------------------------------MEREPLTQ 149
L ++F E +I F M R
Sbjct: 364 YVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEP 423
Query: 150 KLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
++ +L L + EA +L +M RG S ++ + L ++ +L
Sbjct: 424 NVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLL 483
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+G KP TY L+ L K R E R +++ D V+N +YN +I +
Sbjct: 484 SEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRR 543
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+A + +M R + +T+N LI CK + K EL ++ G D +
Sbjct: 544 GAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISC 603
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N MI+ LC+ + ++A + L + + G P+ +TYN ++ LC +G + +L LF ++Q
Sbjct: 604 NIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQV 663
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+ + PD +T+N I C+ + A F+ + G P N +++ L+ L+K
Sbjct: 664 EGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQ 718
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 153/351 (43%), Gaps = 2/351 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P YN ++ L K S+ A +MS C+P+ TY IL++G+C+ G+++E
Sbjct: 384 FGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEE 443
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ +M G N Y LI C ++V +L M + P+ T SL++
Sbjct: 444 AGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIY 503
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +AF L + + + NTL++ L +A ++ M RG
Sbjct: 504 GLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTL 563
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + ++ + + + I G+ + +++ L K G+ +L
Sbjct: 564 DKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFL 623
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
V ++ +YN V++ CKV + A + ++ + P+ T+NT IS CK+
Sbjct: 624 RDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKE 683
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
V+ +E GF P T+N ++ L + E+ L E+ W
Sbjct: 684 GMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL--W 732
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 114/288 (39%), Gaps = 76/288 (26%)
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL-----VMLLECGFKPDKFTFNSMIDC 334
+M++ I F ++ + K + + LL V L E FK +++ +++
Sbjct: 137 QMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFK----SYDLVLEI 192
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD------------------- 375
L + + A + +M+ GV P T+ I++++LC +
Sbjct: 193 LVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPN 252
Query: 376 ----------------VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
V+ +L+L ++M PD+ TFN +I C++NKI A K
Sbjct: 253 SIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVD 312
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAK----------------------------- 450
ML G PDN +Y L+ L + G+ +EA+
Sbjct: 313 RMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKE 372
Query: 451 -QTFL--SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
Q+FL +M G PD +T N+++ L ++G A D+V RG
Sbjct: 373 AQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRG 420
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 4/164 (2%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G + YN +I A K +I+ ++QM +D D + NI+I+G+C++G VD
Sbjct: 558 FRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVD 617
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A ++ G+ P++ TY +++G C R+ E + + ++ V P+ T + +
Sbjct: 618 NAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677
Query: 123 HGVFRCLDP--HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNS 164
++C + + A R +E + L N L+Y L S
Sbjct: 678 S--WQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQS 719
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 239/492 (48%), Gaps = 35/492 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP+ Y+ I L + ++ A + + + + YN +IHG+C+ G +DEA
Sbjct: 285 GESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEA 344
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+++++M+ G +P+VYTY+ILI GFC V + ++E MK N+ P+ + SL HG
Sbjct: 345 LKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHG 404
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
L +K RLS+ S+ I R +G GY +
Sbjct: 405 ----------------------LCKK--------RLSDISLD-----IFRDLGAAGYKYD 429
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + DL+ +++ ++ + P S + L+ K G V + N
Sbjct: 430 QTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFN 489
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++ ++ + N++ID C+ ++ A + EM+ + I PNL T+N +I+ CK+
Sbjct: 490 MMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKER 549
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + EL ++L+ P ++++ID + + AL + M++ GV P+ + Y
Sbjct: 550 KSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYT 609
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
ILI LC + + LF+KM + ++PD ++ ++I FCR+ + KA F ML
Sbjct: 610 ILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQR 669
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G P +Y++L+ K R D A M++ G PD T N+++ ++G ++A
Sbjct: 670 GHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKA 729
Query: 485 HDIVKTSKERGI 496
+++ KE G+
Sbjct: 730 LEMLNEMKENGV 741
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 190/443 (42%), Gaps = 44/443 (9%)
Query: 63 EALR-LVKQMEGLGYAPNVYTYTILIDGFCNAK------RVAEVFRVLEIMKERNVCPNE 115
E LR L ++M+ G PNV+TYTI+++ +C + +LE M+ P
Sbjct: 231 EFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTV 290
Query: 116 ATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
T + ++G+ R A + + + L N +++ L EA +L +
Sbjct: 291 VTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEE 350
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
M ++CGI P TY +L+ K G
Sbjct: 351 M--------------------------KSCGI---------SPDVYTYSILIHGFCKQG- 374
Query: 236 DVEGDRYLNHVFK-DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
DVE YL K + ++ SY+ + CK + D + +I R++ + ++
Sbjct: 375 DVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYS 434
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
LI G C ++ +L+ ++ PD F S++ C+ + +AL+ + M+E
Sbjct: 435 ILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEG 494
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G+ P+ T N++I + C G V +L L +MQ I P+++T+NA+I C+ K E+A
Sbjct: 495 GILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERA 554
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
+ F ML + P YS LI K +A + M + G PD +++
Sbjct: 555 LELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINI 614
Query: 475 LVQQGRFEEAHDIVKTSKERGIS 497
L + R EA+++ K E G++
Sbjct: 615 LCHRSRMCEAYNLFKKMTENGMT 637
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 154/366 (42%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ + + PS Y+++ L K D++ F+ + K D+ Y+ILI G C G
Sbjct: 386 MKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGD 445
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+D A +L+++M AP+ + L+ GFC +M E + P+ AT
Sbjct: 446 LDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNV 505
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ R +A L+ + N ++ RL + A + M R
Sbjct: 506 IIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRN 565
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
LP + + + + + +K GV P Y +L+ L R E
Sbjct: 566 VLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAY 625
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ ++ + + SY VI FC++ M +A + EM R P +VT+ +L+ G+
Sbjct: 626 NLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGY 685
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK + L+ + G PD T+N +I R + AL+ L+EM E GV P+
Sbjct: 686 CKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDH 745
Query: 361 ITYNIL 366
+TY +L
Sbjct: 746 MTYMML 751
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 103/215 (47%), Gaps = 6/215 (2%)
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
+D A +++ F+ LI ++ + ++ + + G + + N ++ CL A+R E
Sbjct: 173 KDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREF 232
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLC------AIGDVARSLRLFQKMQADRISPDIYT 397
EM G PPN TY I++ C A D ++ + ++M+ + SP + T
Sbjct: 233 LRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVT 292
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
++ I CR+ +E A S+++ + + Y+A+I L K G DEA + M+
Sbjct: 293 YSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMK 352
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
G +PD YT ++++ +QG E+ +++ K
Sbjct: 353 SCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMK 387
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 8/219 (3%)
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
++++I F +M++ A ++ + + + + + N L+ + R L +
Sbjct: 182 FDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMK 241
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFE------DALDCLSEMVEWGVPPNTITYNILIRSLC 371
G P+ FT+ M++ C+ + E A + L EM G P +TY+ I LC
Sbjct: 242 STGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLC 301
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
+G V +L + + + ++Y +NA+I C+ ++++A K M + G+ PD +
Sbjct: 302 RVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVY 361
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD--SYTS 468
+YS LI K G ++ M+ + P SY+S
Sbjct: 362 TYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSS 400
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/563 (25%), Positives = 256/563 (45%), Gaps = 73/563 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKP-DRFTYNILIHGICRIGVVDE 63
G+ P +A+ID ++ ID L+ + + V P + TYN+LIHG+C+ G +++
Sbjct: 239 GLKPDYNACSALIDGFMREGDID-EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEK 297
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++K M LG PN T+ +LI+G+C + +L+ M++RN+ P+ + ++++
Sbjct: 298 AAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMIN 357
Query: 124 GV-----------------FRCLDPHKA-FELLI-------RFMEREPLTQKLVC----- 153
G+ F L P+ + LI R E L + C
Sbjct: 358 GLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAP 417
Query: 154 -----NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
N ++ LS EA+ L ++ RG P++ TF + + E
Sbjct: 418 DIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYF 477
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH----------------------- 245
D + G+ P Y +L+ +KAG +E H
Sbjct: 478 DEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKN 537
Query: 246 --------VFKD----RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
VF + LV +V +Y+ +I FCK +++A E+ EM + IAPN+ +
Sbjct: 538 GRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIY 597
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
N L+ G CK ++ + R+L + E G +PD T+++MID C++ +A EM
Sbjct: 598 NALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS 657
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
GV P++ YN L+ C GD+ +++ LF++M + + +FN LI +C+ KI++
Sbjct: 658 KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQE 716
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A + F M+ + PD+ +Y+ +I K+G+ +EA F M++ D+ T ++
Sbjct: 717 ASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMY 776
Query: 474 TLVQQGRFEEAHDIVKTSKERGI 496
+ G+ E + + +G+
Sbjct: 777 GYNKLGQSSEVFALFEKMVAKGV 799
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 222/493 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+T Y + L ++ ++ A L F++M KPD + LI G R G +DE
Sbjct: 204 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 263
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LR+ M G N+ TY +LI G C ++ + +L+ M PN T L+ G
Sbjct: 264 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 323
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + +A ELL +R + + ++ L + S A +L KM G P
Sbjct: 324 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 383
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + + E +LD GV P Y ++ L KAG+ E YL
Sbjct: 384 VVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 443
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L + ++ I + K M A + EM D + PN + LI+GH K
Sbjct: 444 EIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAG 503
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + L G PD T ++ I L + R ++AL SE+ E G+ P+ TY+
Sbjct: 504 NLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYS 563
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C G+V ++ L +M I+P+I+ +NAL+ C+ I++A K F M
Sbjct: 564 SLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK 623
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL PD+ +YS +I KS EA F M G P S+ N ++ ++G E+A
Sbjct: 624 GLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKA 683
Query: 485 HDIVKTSKERGIS 497
++ + ++G +
Sbjct: 684 MNLFREMLQKGFA 696
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/496 (21%), Positives = 224/496 (45%), Gaps = 1/496 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++F G+ P+ +Y+ +I I+ A MS PD F YN +I + + G
Sbjct: 375 MTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 434
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
++EA + +++G G P+ T+ I G+ ++ E + + M + + PN
Sbjct: 435 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 494
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L++G F+ + +A + L C+ ++ L N EA + ++ ++G
Sbjct: 495 LINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 554
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P+ T+ ++ ++ + + D +G+ P Y L++ L K+G
Sbjct: 555 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 614
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + + L + +Y+ +ID +CK + A + EM + + P+ +N L+ G
Sbjct: 615 KLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGC 674
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ ++ K L +L+ GF +FN++ID C++ + ++A EM+ + P+
Sbjct: 675 CKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDH 733
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TY +I C G + + LF++MQ + D T+ +L+ + ++ + + F
Sbjct: 734 VTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEK 793
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ G++PD +Y +I A K EA + + G +L++ L ++
Sbjct: 794 MVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRED 853
Query: 481 FEEAHDIVKTSKERGI 496
EA ++ E G+
Sbjct: 854 LTEASKLLDEMGELGL 869
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/507 (24%), Positives = 216/507 (42%), Gaps = 53/507 (10%)
Query: 48 YNILIHGICRIGVVDEALRL------------------VKQMEGLGYAPNVYTYTILIDG 89
++ILI R+G++DEA + ++ M G PN YTYTI+ G
Sbjct: 159 FDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITAG 218
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C AKR+ E E M++ + P+ +L+ G R D + + +
Sbjct: 219 LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPIN 278
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF--------------------- 188
+ N L++ L +AA IL+ M G P S TF
Sbjct: 279 LITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLD 338
Query: 189 ----------DYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
+ ++ GL DL+ +L+ G+KP Y L+ G
Sbjct: 339 EMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEG 398
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
R E R L+ + + ++ YN +I C K M+ A+ E++ R + P+ VTF
Sbjct: 399 RIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 458
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
I G+ K ++ + + +L+ G P+ + +I+ +A +AL +
Sbjct: 459 AFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHAL 518
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
GV P+ T + I L G V +L++F +++ + PD++T+++LI FC+ ++EKA
Sbjct: 519 GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKA 578
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
+ M G+ P+ F Y+AL+ L KSG A++ F M + G PDS T + +++
Sbjct: 579 FELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 638
Query: 475 LVQQGRFEEAHDIVKTSKERGISFKSF 501
+ EA + +G+ SF
Sbjct: 639 YCKSENVAEAFSLFHEMPSKGVQPHSF 665
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 218/492 (44%), Gaps = 1/492 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P YNA+I L K+ ++ A ++ KPD T+ I G + G + EA
Sbjct: 414 GVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEA 473
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G PN YT+LI+G A + E + + V P+ T + +HG
Sbjct: 474 AKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHG 533
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A ++ E+ + ++L+ +A + +M +G P
Sbjct: 534 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 593
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ V L D+ + D ++G++P TY +++ K+ E +
Sbjct: 594 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 653
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + YN ++ CK M++A + REM + A L +FNTLI G+CK
Sbjct: 654 EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSC 712
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + +L ++ PD T+ ++ID C+A + E+A EM E + +T+TY
Sbjct: 713 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYT 772
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ +G + LF+KM A + PD T+ +I + C+ + + +A K ++
Sbjct: 773 SLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 832
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ + LI AL K EA + M + G P + ++ + + G+ +EA
Sbjct: 833 GMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEA 892
Query: 485 HDIVKTSKERGI 496
+ + K G+
Sbjct: 893 TRVFEGVKSLGL 904
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 213/446 (47%), Gaps = 1/446 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ LY +I+ K+ ++ A F+ + PD T + IHG+ + G V EA
Sbjct: 484 GLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEA 543
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ +++ G P+V+TY+ LI GFC V + F + + M + + PN +LV G
Sbjct: 544 LKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDG 603
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + D +A +L E+ + +T++ + +EA ++ +M +G P
Sbjct: 604 LCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPH 663
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S ++ V D+ + + +++G S + L++ K+ + E +
Sbjct: 664 SFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQ 722
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +++ + +Y VID CK M+ A + +EM++R++ + VT+ +L+ G+ K
Sbjct: 723 EMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLG 782
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L ++ G KPD+ T+ +I C+ +A E+V G+ ++
Sbjct: 783 QSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHD 842
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI +LC D+ + +L +M + P + + L++SF K+++A + F + +L
Sbjct: 843 LLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSL 902
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAK 450
GL PD + L+ + ++A+
Sbjct: 903 GLVPDTTTLIDLVNGNLNDTDSEDAR 928
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 150/313 (47%), Gaps = 1/313 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P + Y+ +ID KS ++ A+ F +M +P F YN L+HG C+ G +++A
Sbjct: 624 GLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKA 683
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L ++M G+A + ++ LIDG+C + ++ E ++ + M + + P+ T +++
Sbjct: 684 MNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDW 742
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A L ER + + +L+Y + +SE A+ KM +G P+
Sbjct: 743 HCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPD 802
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + +L E + D + +G+ + + + LL+ AL K E + L+
Sbjct: 803 EVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLD 862
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L ++ + + ++ F + MD AT + ++ + P+ T L++G+ D
Sbjct: 863 EMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDT 922
Query: 305 EVHKTRELLVMLL 317
+ R L+ L+
Sbjct: 923 DSEDARNLIKQLV 935
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 232/475 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP YN++I AL K+ ++D A + +M + P+R T+N L+HG C G ++A
Sbjct: 233 GLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDA 292
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + K+M G P+V+TY L+ C R E ++ + M +R PN AT +L+HG
Sbjct: 293 IGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHG 352
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
K LL + + N L+ + + +A + KM +G P+
Sbjct: 353 YATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPD 412
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T+ + L +++ I G+ P + L+ L + + +
Sbjct: 413 TVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAV 472
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N +N +++ CK M+ RA I M D+ +++T+NTLI G+C
Sbjct: 473 EMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHG 532
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V + +LL ++ G KP++ T+N+MI+ C+ R EDA +M GV P +TY+
Sbjct: 533 KVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYS 592
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+++ L A + L+ M I DI T+N ++ C+ N + A + F ++ +
Sbjct: 593 TILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLI 652
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+N +++ +I AL+K GR DEAK F S+ G P+ T L++++L++QG
Sbjct: 653 DFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 707
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 239/494 (48%), Gaps = 11/494 (2%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
L A+ D S ++D+A ++M V C P+ F+Y IL+ G+C +AL L+ M
Sbjct: 132 LLKALCDKKRTSEAMDIA---LRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTM 188
Query: 72 ------EGLGYAPNVYTYTILIDGFC-NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
G GY P+V +Y +I+G +++ + + + M ++ + P+ T S++
Sbjct: 189 MVADDTRG-GYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISA 247
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + KA +L+R ++ + ++ N+LL+ ++ ++A + ++M G P+
Sbjct: 248 LSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPD 307
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L E I D+ +KRG KP +TY L+ G V+ L+
Sbjct: 308 VFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLD 367
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ + + +N++I + K +D A + +MR + + P+ VT+ ++ C
Sbjct: 368 MMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVG 427
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V L+ G PD F ++I LC +++ A + EM+ G+ PN I +N
Sbjct: 428 KVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFN 487
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ LC G VAR+ +F M + D+ T+N LI +C K+++A K M+
Sbjct: 488 TLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLD 547
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G++P+ +Y+ +I K+GR ++A F M G NP T + IL+ L Q R A
Sbjct: 548 GVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAA 607
Query: 485 HDIVKTSKERGISF 498
++ + GI F
Sbjct: 608 KELYLWMIKSGIKF 621
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/487 (27%), Positives = 221/487 (45%), Gaps = 6/487 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLA-YLKFQQMSVDQCK----PDRFTYNILIHGICRI 58
LG +P+ Y ++ L N A +L M D + PD +YN +I+G+ R
Sbjct: 156 LGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLRE 215
Query: 59 G-VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
G +D A L QM G +P+V TY +I A+ + + VL M + PN T
Sbjct: 216 GRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRIT 275
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
SL+HG P+ A + R NTL+ L N + EA I M
Sbjct: 276 HNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMV 335
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
RG+ P S+T+ + T L + +LD ++ G++P + +L+ K G+
Sbjct: 336 KRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVD 395
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ + + + L + +Y +V+D C V +D A + + P+ V F LI
Sbjct: 396 DAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLI 455
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G C + K EL V ++ G P+ FN++++ LC+ A + MV V
Sbjct: 456 HGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQ 515
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
+ ITYN LI C G V + +L + M D + P+ T+N +I +C+ +IE A
Sbjct: 516 RDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSL 575
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F M + G+ P +YS +++ L ++ R AK+ +L M ++G D T N+IL L Q
Sbjct: 576 FRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQ 635
Query: 478 QGRFEEA 484
++A
Sbjct: 636 NNCTDDA 642
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/480 (22%), Positives = 208/480 (43%), Gaps = 38/480 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P++ Y ++ S+ + M + +PD + +NILI + G VD+A
Sbjct: 338 GHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDA 397
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +M G P+ TY I++D C +V + + + P+ R+L+HG
Sbjct: 398 MLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHG 457
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KA EL + + R + NTLL L M + A
Sbjct: 458 LCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAK-------------- 503
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
I D ++ V+ TY L++ G+ E + L
Sbjct: 504 ---------------------NIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLE 542
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D + N +YN +I+ +CK ++ A + R+M + + P +VT++T++ G +
Sbjct: 543 GMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQAR 602
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+EL + +++ G K D T+N ++ LC+ + +DAL + T+N
Sbjct: 603 RTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFN 662
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+I +L G + LF + A + P++ T+ +++S +E+ + F S+
Sbjct: 663 IMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKN 722
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS-NLILETLVQQGRFEE 483
G ++ +AL+ L++ G +A +++N + ++ T+ +L+L LV G++++
Sbjct: 723 GCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLVL--LVSSGKYDQ 780
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+VM+ P+ T++ +IDC R + A L ++ G IT++ L+++LC
Sbjct: 79 MVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCD 138
Query: 373 IGDVARSLRL-FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL-----GL 426
+ ++ + ++M +P+++++ L++ C N+ ++A +M+ G
Sbjct: 139 KKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGY 198
Query: 427 RPDNFSYSALIKALIKSGR-FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
PD SY+ +I L++ GR D A F M G +PD T N I+ L + ++A
Sbjct: 199 PPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKA 257
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/514 (26%), Positives = 235/514 (45%), Gaps = 36/514 (7%)
Query: 18 DALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG-VVDEALRLVKQMEGLGY 76
DA +ID A F M + P + L+ I ++G D + L KQME +G
Sbjct: 65 DASSSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGL 124
Query: 77 APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFE 136
+PN+YT +I ++ FC +RV F VL + + + P T +L++G+ + + +A E
Sbjct: 125 SPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVE 184
Query: 137 LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLV 196
L + + NT++ L + AA +L+KM + G P T+ + L
Sbjct: 185 LFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLC 244
Query: 197 TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVN 256
+NE I +G+ P TY L++ L K R E LN + ++ ++
Sbjct: 245 RDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIV 304
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF----------------------- 293
++N+++D FCK + A + + M + + PN+VT+
Sbjct: 305 TFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVM 364
Query: 294 ------------NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
N LI+G+CK + + +L ++ G P+ ++N++I C+ +
Sbjct: 365 ITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKL 424
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+A D M G P+ TY+IL+ C G + ++ RLF+ MQ+ + P++ + L
Sbjct: 425 REAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTIL 484
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
+ + C+ + A K F + GL+P Y+ +I L K G DEA + F +ME +GC
Sbjct: 485 VHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGC 544
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
PD + N+I+ L+Q A +V ++RG
Sbjct: 545 PPDEISYNVIIRGLLQHKDESRALLLVGEMRDRG 578
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 226/459 (49%), Gaps = 6/459 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ +G+SP+ + ++ + +DL + ++ +P T+ LI+G+C++G
Sbjct: 119 MELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGE 178
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+A+ L M G P+VYTY +I+G C A +L+ M+E PN T +
Sbjct: 179 FAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYST 238
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDR 179
L+ + R ++A ++ +M+ + ++ + T L+ L S EA+A+L +M
Sbjct: 239 LIDSLCRDRLVNEALDIF-SYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSL 297
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
+P+ TF+ V ++E G+L T + GV+P TY LM Y DV
Sbjct: 298 NIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYG-YSLWTDVVE 356
Query: 240 DRYLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
R L HV + N+ SYN++I+ +CK +D A ++ EM + + PN V++NTLI
Sbjct: 357 ARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIH 416
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G C+ ++ + ++L + G PD FT++ ++D C+ A M + P
Sbjct: 417 GFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKP 476
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N + Y IL+ ++C G+ + +LF ++ + P + + +I C+ +++A +AF
Sbjct: 477 NLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAF 536
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+M G PD SY+ +I+ L++ DE++ L E
Sbjct: 537 RNMEADGCPPDEISYNVIIRGLLQHK--DESRALLLVGE 573
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 139/283 (49%)
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G+ P T + M + R G L V K L + ++ +I+ CKV +A
Sbjct: 123 GLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQA 182
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
E+ +M + P++ T+NT+I+G CK E LL + E G +P+ T++++ID
Sbjct: 183 VELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDS 242
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LCR +ALD S M G+ P+ TY LI+ LC + L +M + I PD
Sbjct: 243 LCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPD 302
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
I TFN L+ +FC+ K+ +A +M +G+ P+ +YS+L+ EA++ F
Sbjct: 303 IVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFH 362
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M GC P+ ++ N+++ + R +EA + +G++
Sbjct: 363 VMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLT 405
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 129/255 (50%), Gaps = 1/255 (0%)
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMM-DRATEICREMRDRDIAPNLVTFNTLISGHC 301
NH+ + + + + ++ K+ D + ++M ++PN+ T + ++ C
Sbjct: 80 FNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFC 139
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ V +L +++ G +P TF ++I+ LC+ F A++ +MV G P+
Sbjct: 140 QLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVY 199
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN +I LC IG+ A + L +KM+ P++ T++ LI S CR + +A F M
Sbjct: 200 TYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYM 259
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G+ PD F+Y++LI+ L K R+ EA M PD T N++++T ++G+
Sbjct: 260 KAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKV 319
Query: 482 EEAHDIVKTSKERGI 496
EA ++KT E G+
Sbjct: 320 SEALGVLKTMTEMGV 334
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 150/355 (42%), Gaps = 35/355 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y+ +ID+L + ++ A F M PD FTY LI G+C+ EA
Sbjct: 228 GCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEA 287
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M L P++ T+ +L+D FC +V+E VL+ M E V PN T SL++G
Sbjct: 288 SALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYG 347
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
D +A +L + + N L+ EA + +M +G P
Sbjct: 348 YSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPN 407
Query: 185 SSTFDYTVT--CLVTGL-----------------DLNETCGILDTFIKRG---------- 215
+ +++ + C + L DL +LD F K+G
Sbjct: 408 NVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFR 467
Query: 216 ------VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+KP Y +L+ A+ K+G + + + +F L +V Y +I+ CK
Sbjct: 468 AMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEG 527
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
++D A E R M P+ +++N +I G + + + L+ + + GF D
Sbjct: 528 LLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIAD 582
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 1/176 (0%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW-GVPPNTITYNILIRSLCAIGDVARSLR 381
P F ++ + + ++ D + LS+ +E G+ PN T +I + C + V
Sbjct: 90 PCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFS 149
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
+ K+ + P I TF LI C++ + +A + F M+ G +PD ++Y+ +I L
Sbjct: 150 VLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLC 209
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
K G A ME+ GC P+ T + ++++L + EA DI K +GIS
Sbjct: 210 KIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGIS 265
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P +LY +I+ L K +D A F+ M D C PD +YN++I G+ + A
Sbjct: 508 GLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRA 567
Query: 65 LRLVKQMEGLGYAPNV 80
L LV +M G+ +V
Sbjct: 568 LLLVGEMRDRGFIADV 583
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 231/488 (47%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
S R YN ++ L + ID + +M D P+ +T N +++ ++G + EA V
Sbjct: 178 SVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYV 237
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
++ G +P+ +TYT LI G+C V ++V +M + NE + +++HG+
Sbjct: 238 SKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEA 297
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+ L + E + +++ L N E + +M +R P T+
Sbjct: 298 GRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTY 357
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
V + L+E+ IL+ +++G+ P TY L+ + GR L +
Sbjct: 358 TVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMES 417
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+ N +YN +I F K + +A + +M + + P+LVT+N+LI CK
Sbjct: 418 NNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDS 477
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+LL +L E G PD++T++ ID LC++ R E+A D + + E G+ N + Y LI
Sbjct: 478 AYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALID 537
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
C G + ++ L ++M ++ P+ T+N+LI C+ K+++ +M +G++P
Sbjct: 538 GHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKP 597
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+Y+ LI+ +++ G FD A + F M G PD YT + T G +EA ++
Sbjct: 598 TVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMM 657
Query: 489 KTSKERGI 496
E G+
Sbjct: 658 ARMIEAGV 665
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/459 (26%), Positives = 214/459 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP + Y ++I ++N ++ AY F M C+ + +Y +IHG+C G +DE
Sbjct: 244 GLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEG 303
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L K+M P V TYT++I R E + M+ER+ PN T +V
Sbjct: 304 ISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDA 363
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + ++ +L ME+ + + N L+ A IL M P
Sbjct: 364 MCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPN 423
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + +++ +L ++ + P TY L+ KAG + L+
Sbjct: 424 ERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLD 483
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ LV + +Y++ ID CK M+ A ++ ++++ I N V + LI GHCK
Sbjct: 484 LLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAG 543
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + LL + P+ T+NS+I +C+ + ++ L + M + GV P TY
Sbjct: 544 KIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYT 603
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
ILI + GD + R+F +M + PD+YT+ A I ++C +++AE M+
Sbjct: 604 ILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEA 663
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
G+ PD+ +Y+ LI A + G +A M GC+P
Sbjct: 664 GVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDP 702
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 184/396 (46%), Gaps = 2/396 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ R Y +I AL ++ F +M C+P+ TY +++ +C+ +DE+ R+
Sbjct: 317 PTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRI 376
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M G P+V TY LI G+C R+ +L +M+ N PNE T L+ G +
Sbjct: 377 LNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSK 436
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
HKA LL + +E + LT LV N+L++ A +L + + G +P+
Sbjct: 437 RKHVHKAMTLLSKMLESK-LTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQW 495
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L + E C + ++ ++G+K Y L++ KAG+ E L +
Sbjct: 496 TYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERM 555
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ + N ++YN +I CK + + M + P + T+ LI ++ +
Sbjct: 556 HSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDF 615
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ ++ G KPD +T+ + I C + ++A ++ M+E GV P+++TY +L
Sbjct: 616 DHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLL 675
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
I + +G + + ++M P +N LI
Sbjct: 676 ISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 151/363 (41%), Gaps = 35/363 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS YNA+I + I+ A M + C+P+ TYN LI G + V +A
Sbjct: 384 GLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKA 443
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M P++ TY LI C A +++L+++KE + P++ T +
Sbjct: 444 MTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDT 503
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A +L E+ +++ L+ EA ++L +M LP
Sbjct: 504 LCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPN 563
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
SST++ + + + E +++ K GVKP +TY +L+E + + EGD
Sbjct: 564 SSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLR-----EGD---- 614
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
D A + +M P++ T+ I +C
Sbjct: 615 --------------------------FDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSG 648
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V + ++ ++E G PD T+ +I R DA + L M++ G P+ +N
Sbjct: 649 NVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWN 708
Query: 365 ILI 367
LI
Sbjct: 709 NLI 711
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
FK ++N ++ L R ++ +EM+ + PN T N ++ + +G++ +
Sbjct: 175 FKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEAN 234
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
K+ +SPD +T+ +LI +CR N + A K F M G R + SY+ +I L
Sbjct: 235 LYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGL 294
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
++GR DE F M ++ C P T +I+ L R E D+ +ER
Sbjct: 295 CEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERS 349
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 104/227 (45%)
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
++D ++ R+ D ++ ++N L+ + + + + + +L P+ +T N
Sbjct: 159 LLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLN 218
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+M++ + +A +S++ + G+ P++ TY LI C DV + ++F M
Sbjct: 219 TMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNK 278
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ ++ +I C +I++ F M P +Y+ +I AL + R E
Sbjct: 279 GCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEG 338
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
F M + C P+ +T ++++ + ++ + +E+ I+ E+G+
Sbjct: 339 MDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGL 385
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S +G+ P+ Y +I+ +++ D A F QM KPD +TY IH C G
Sbjct: 590 MSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGN 649
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V EA ++ +M G P+ TYT+LI + + F VL+ M + P+ +
Sbjct: 650 VKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNN 709
Query: 121 LV 122
L+
Sbjct: 710 LI 711
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/518 (27%), Positives = 236/518 (45%), Gaps = 41/518 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN+VI AL K+ ++D A +QM + +PD TYN LIHG +G +A
Sbjct: 241 GVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQA 300
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+R+ K+M G PN T + + C R+ E + M + N + +L+HG
Sbjct: 301 VRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHG 360
Query: 125 --VFRCL-DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
CL D F L++R + + V N L+ + M EA I M RG
Sbjct: 361 YATAGCLVDMSNLFNLMVR---DGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGL 417
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEA------------ 229
P+ T+ + +++ + I +GV+P F+ Y L++
Sbjct: 418 NPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEE 477
Query: 230 -----------------------LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
L K GR E R + + + ++VN + +ID +C
Sbjct: 478 LVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYC 537
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
+ M A + M I P++VT+ TL++G CK+ + L LL G KP F
Sbjct: 538 LIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTF 597
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+ ++D L A R A + EM+E G+ TY+IL+ LC ++ +FQK+
Sbjct: 598 TYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKL 657
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
A + DI N +I + + E+AE F S+ GL P +Y+ +++ LIK G
Sbjct: 658 CAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSV 717
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+EA+ F M ++G +P S+ N+I+ TL+++G +A
Sbjct: 718 EEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKA 755
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 131/521 (25%), Positives = 229/521 (43%), Gaps = 35/521 (6%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
+Y+ V+ L K + A F +M+ P+ TYN +IH +C+ VD+A +++QM
Sbjct: 213 VYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQM 272
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
G G P+ TY LI G+ + + R+ + M R V PN T + V + +
Sbjct: 273 VGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRI 332
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
+A E + + + +TLL+ + + + + M G +P F+
Sbjct: 333 EEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNIL 392
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
V + E I + KRG+ P TYL ++ A + G + NH+ +
Sbjct: 393 VNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGV 452
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
N Y +I FC + +A E+ E+R++ + P +++F +LI+ CK+ V + +
Sbjct: 453 EPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQR 512
Query: 312 LLVMLLECGFKPDKFTFNSMID--CL---------------------------------C 336
+ M++ G K D F S+ID CL C
Sbjct: 513 IFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCC 572
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
+ R +D L E++ GV P T TY I++ L G A + +FQ+M I+ I
Sbjct: 573 KNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIP 632
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
T++ L+ CR N E+A F + + ++ D + +I + K+ R +EA+ F S+
Sbjct: 633 TYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASI 692
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G P T +++E L+++G EEA + + G+S
Sbjct: 693 PDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLS 733
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/490 (22%), Positives = 224/490 (45%), Gaps = 5/490 (1%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
+ L + DA ++D+ + + ++ C PD +Y+ ++ +C G AL +++
Sbjct: 142 SSLLRGLCDAKRTDEAVDVLFHRMPELG---CVPDAISYSTVLKSVCDDGRSQWALDILR 198
Query: 70 QM--EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+G G NV Y+ ++ G +V E + M ++ V PN T S++H + +
Sbjct: 199 MAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCK 258
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
KA +L + + + NTL++ S +A + ++M RG +P + T
Sbjct: 259 ARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVT 318
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
V L + E D+ + +G K +Y L+ AG V+ N +
Sbjct: 319 CSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMV 378
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+D +V N + +N++++ + K M+ A I +M+ R + P+++T+ +I C+ +
Sbjct: 379 RDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMD 438
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ +++ G +P+ + +I C A + + E+ G+ P +++ LI
Sbjct: 439 DAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLI 498
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G V + R+F + D+ F +LI +C + K+ +A + +M+++G+
Sbjct: 499 NHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIE 558
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD +Y L+ K+GR D+ F + G P ++T +IL+ L GR A ++
Sbjct: 559 PDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEM 618
Query: 488 VKTSKERGIS 497
+ E GI+
Sbjct: 619 FQEMIESGIA 628
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 157/336 (46%), Gaps = 7/336 (2%)
Query: 169 AAAILRKM----GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYL 224
A A+ +M G R LP T+ + C L+ +++G+K
Sbjct: 83 AVALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVS 142
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKD-RLVSNVNSYNMVIDCFCKVNMMDRATEICR-EMR 282
L+ L A R E L H + V + SY+ V+ C A +I R ++
Sbjct: 143 SLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVK 202
Query: 283 DRDIAP-NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
P N+V ++T++ G K+ +V + +L + + G P+ T+NS+I LC+A
Sbjct: 203 QGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAV 262
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+ A L +MV GV P+ +TYN LI +G +++R+F++M + + P+ T +
Sbjct: 263 DKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTF 322
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
+ C+ +IE+A + F SML G + + SYS L+ +G + F M ++G
Sbjct: 323 VAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGI 382
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
P+ + N+++ + G EA I + ++RG++
Sbjct: 383 VPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLN 418
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 108/265 (40%), Gaps = 36/265 (13%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI P Y +++ K+ ID + F+++ KP FTY I++ G+ G
Sbjct: 555 VGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAA 614
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + ++M G A + TY+IL+ G C RN C EA
Sbjct: 615 AKEMFQEMIESGIAVTIPTYSILLTGLC-----------------RNNCTEEAIT----- 652
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
VF+ K + ++F ++ N ++ ++ EA + + D G +P
Sbjct: 653 -VFQ-----KLCAMNVKF-------DIVILNIMISKMFKARRREEAEGLFASIPDYGLVP 699
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ + L+ + E G+ +K G+ P +++ L + G V+ Y+
Sbjct: 700 TVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYM 759
Query: 244 NHVFKDRLVSNVNSYNMVIDCF-CK 267
V ++ ++ +M++ F CK
Sbjct: 760 CRVDGKSILFEASTASMLLSLFSCK 784
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 231/498 (46%), Gaps = 36/498 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP YN +++A + + A +M + P R TYN L+ R+G + +A
Sbjct: 239 GLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQA 298
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN-VCPNEATVRSLVH 123
+V+ M G+ P+++TY +L G C A +V E F++ + M++ V P+ T +LV
Sbjct: 299 TDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVD 358
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
F+C +S+A +L +M ++G
Sbjct: 359 ACFKC-----------------------------------QRSSDALNLLEEMREKGVKS 383
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T + V L L E G L+ + G+ P TY L++A KAG + +
Sbjct: 384 SLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLM 443
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + L + + N ++ CK + A E+ R R P+ V++ T+++ + K+
Sbjct: 444 DEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKE 503
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ L +++ P T+N++I L + +A+D L+E++E G+ P+ TY
Sbjct: 504 YKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTY 563
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI+I + C GD+ ++ + KM + PD+ T N L+ C ++EKA K F S +
Sbjct: 564 NIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVE 623
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G + D +Y+ LI+AL K D A + F ME G PD +T N++L L + GR E
Sbjct: 624 KGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVE 683
Query: 484 AHDIVKTSKERGISFKSF 501
A ++ E G + F
Sbjct: 684 AQKMLHKLNESGKLYGRF 701
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 226/493 (45%), Gaps = 38/493 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSI--DLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ PS + NAV+ AL +S S + F + + P+ +T+N+L+H C G + +
Sbjct: 168 VRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLAD 227
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL + +M+G G +P+ TY L++ C + E +L MK+ + P AT +LV
Sbjct: 228 ALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVS 287
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
R +A ++ M G+ P
Sbjct: 288 AYARL-----------------------------------GWIKQATDVVEAMTAFGFEP 312
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRG-VKPRFSTYLLLMEALYKAGRDVEGDRY 242
+ T++ L ++E + D + G V P TY L++A +K R +
Sbjct: 313 DLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNL 372
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + + + S++ ++N+++ C+ ++ A M + + P+++T+NTLI CK
Sbjct: 373 LEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCK 432
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
V K L+ ++ G K D FT N+++ LC+ R+E+A + L + G P+ ++
Sbjct: 433 AGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVS 492
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y ++ + +L L+ +M +++P I T+N LI+ M K+ +A ++
Sbjct: 493 YGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELM 552
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+GL PD+ +Y+ +I A K G ++A Q M +N PD T N ++ L GR E
Sbjct: 553 EMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLE 612
Query: 483 EAHDIVKTSKERG 495
+A + ++ E+G
Sbjct: 613 KAMKLFESWVEKG 625
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/513 (23%), Positives = 196/513 (38%), Gaps = 107/513 (20%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ YN ++ A + I A + M+ +PD +TYN+L G+C+ G VDEA
Sbjct: 274 GIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEA 333
Query: 65 LRLVKQMEGLG-YAPNVYTYTILID----------------------------------- 88
+L +ME LG +P+V TY L+D
Sbjct: 334 FKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVK 393
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
G C ++ E LE+M E + P+ T +L+ + + KAF L+ +
Sbjct: 394 GLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKM 453
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
NTLLY L EA +LR RG++P+ ++ + +
Sbjct: 454 DTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLW 513
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
D IKR + P STY L++ L G+ E LN + + LV + +YN++I +CK
Sbjct: 514 DEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKE 573
Query: 269 NMMDRATEICREMRDRDIAPNLVT-----------------------------------F 293
+++A + +M + P++VT +
Sbjct: 574 GDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITY 633
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS---- 349
NTLI CKD +V + G +PD FT+N ++ L A R +A L
Sbjct: 634 NTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNE 693
Query: 350 -----------------EMVEWGVPP---------------NTITYNILIRSLCAIGDVA 377
E VE G P + +YN I+ LC G +
Sbjct: 694 SGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLK 753
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
+ + +M +S D T+ L++ + K
Sbjct: 754 EAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQK 786
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 126/260 (48%), Gaps = 6/260 (2%)
Query: 243 LNHVFKDRLVSNVNSY--NMVIDCFCKVNMMDRATEICREMRDRD-IAPNLVTFNTLISG 299
L H+ + L S S + + + ++ + A ++ R R + P+L N ++S
Sbjct: 122 LRHLHRHLLASFPTSALADAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSA 181
Query: 300 HCKDAEVHKTRELLVM--LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
+ L L+ P+ +TFN ++ C DAL LS+M +G+
Sbjct: 182 LARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLS 241
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P+ +TYN L+ + C G + + L +M+ + I P T+N L+ ++ R+ I++A
Sbjct: 242 PDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDV 301
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG-CNPDSYTSNLILETLV 476
+M G PD ++Y+ L L ++G+ DEA + MEQ G +PD T N +++
Sbjct: 302 VEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACF 361
Query: 477 QQGRFEEAHDIVKTSKERGI 496
+ R +A ++++ +E+G+
Sbjct: 362 KCQRSSDALNLLEEMREKGV 381
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/503 (27%), Positives = 234/503 (46%), Gaps = 46/503 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSN----SIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
LG+ P T Y+ V+ +L + + ++DL + ++ C P+ +YN +IHG R G
Sbjct: 184 LGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSG--GCSPNVVSYNTVIHGFFREG 241
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
V +A L +M G P+V TY+ ID C A+ + + VL M P++ T
Sbjct: 242 EVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYN 301
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
++HG + +L ++ E A + R+M R
Sbjct: 302 CMIHG----------YSILGQW-------------------------KETAGMFREMTRR 326
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G +P+ T + ++ L E D+ +G KP TY +L+ G V+
Sbjct: 327 GLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDM 386
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
N + + +V++ + YN++ID + K MMD A I +M++R + P+ T+ T+I+
Sbjct: 387 LNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAA 446
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP-P 358
+ + + ++ G KPD +NS+I C A + +SEM+ G+P P
Sbjct: 447 FSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRP 506
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
NT+ +N +I SLC G V + +F + PD+ TFN+LI + + K+EKA
Sbjct: 507 NTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVL 566
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+M+++G+ PD +YSAL+ ++GR D+ F M G P + T +IL L
Sbjct: 567 DAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFND 626
Query: 479 GRFEEA----HDIVKTSKERGIS 497
GR A H+++++ IS
Sbjct: 627 GRTVGAKKMCHEMIESGTTMDIS 649
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/536 (25%), Positives = 240/536 (44%), Gaps = 44/536 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y++ IDAL K+ ++D A L +QM + +PD+ TYN +IHG +G E
Sbjct: 257 GVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKET 316
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++M G P+++T + C + E + M + P+ T L+HG
Sbjct: 317 AGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHG 376
Query: 125 VFRCLDPHKAFELLIRFMEREP---LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++L F E + V N L+ M EA I +M +RG
Sbjct: 377 Y---AAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGV 433
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P++ T+ + L + + I G+KP Y L++ G V+
Sbjct: 434 MPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKE 493
Query: 242 YLNHVFKDRLVSNVNS--YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
++ + R + N+ +N +I+ CK + A +I + P+++TFN+LI G
Sbjct: 494 LISEMMS-RGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDG 552
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ ++ K +L ++ G +PD T+++++D CR R +D L EM+ GV P
Sbjct: 553 YGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPT 612
Query: 360 TITYNILIRSL---------------------------CAI--GDVAR------SLRLFQ 384
TITY I++ L C I G + R ++ LF+
Sbjct: 613 TITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFK 672
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
K+ A + +I N +I + ++ K E+A + F S+ GL P+ +Y +I L+K G
Sbjct: 673 KLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEG 732
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+EA F ME++GC P S N I+ L+++G +A + + + IS ++
Sbjct: 733 SVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEA 788
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 177/396 (44%), Gaps = 3/396 (0%)
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
E + R P T L+ R P F L RF++ T +V N LL L +
Sbjct: 108 EEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHA 167
Query: 164 SMASEAA-AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR--GVKPRF 220
+ +A +L +M + G P++ ++ + L +L T +K+ G P
Sbjct: 168 KRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNV 227
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
+Y ++ ++ G + + + + +V +V +Y+ ID CK MD+A + R+
Sbjct: 228 VSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQ 287
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M P+ VT+N +I G+ + +T + + G PD FT NS + LC+ +
Sbjct: 288 MISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGK 347
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
++A + M G P+ +TY++L+ A G V L LF M+ + I D +N
Sbjct: 348 SKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNI 407
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI ++ + +++A F M G+ PD ++Y +I A + GR +A F M G
Sbjct: 408 LIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMG 467
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
PD+ N +++ G +A +++ RGI
Sbjct: 468 LKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGI 503
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 186/421 (44%), Gaps = 7/421 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI +YN +IDA K +D A L F QM PD +TY +I R+G + +A
Sbjct: 397 GIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADA 456
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVH 123
+ QM +G P+ Y LI GFC + + ++ M R + PN S+++
Sbjct: 457 MDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIIN 516
Query: 124 GV---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ R ++ F+L+I ER + + N+L+ +A +L M G
Sbjct: 517 SLCKEGRVVEAQDIFDLVIHIGERPDV---ITFNSLIDGYGLVGKMEKAFGVLDAMISVG 573
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T+ + +++ + + +GVKP TY +++ L+ GR V
Sbjct: 574 IEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAK 633
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + + ++++ +++ C+ N D A + +++ ++ N+ NT+I
Sbjct: 634 KMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAM 693
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K + + EL + G P+ T+ MI L + E+A + S M + G P++
Sbjct: 694 YKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSS 753
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
N +IR L G+++++ K+ IS + T + ++ F R K + K+ +
Sbjct: 754 RLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKSLPA 813
Query: 421 M 421
M
Sbjct: 814 M 814
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 99/245 (40%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI P Y+A++D ++ ID + F++M KP TY I++HG+ G
Sbjct: 572 VGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVG 631
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ +M G ++ T I++ G C E + + + NV N A + +++
Sbjct: 632 AKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMID 691
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+++ +A EL + ++ L EA + M G P
Sbjct: 692 AMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAP 751
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
S + + L+ ++++ L + + ST L++ + G+ E + L
Sbjct: 752 SSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKSL 811
Query: 244 NHVFK 248
+++
Sbjct: 812 PAMYQ 816
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 229/489 (46%), Gaps = 2/489 (0%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y VI L S ID A F+++ C P+ Y +I G+ + G +++ L+ + M
Sbjct: 366 YTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMS 425
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G P TYT++IDG C A+ + + +V E M ++ P+ T +L+ G +
Sbjct: 426 GSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMD 485
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A +LL + + P + ++++ M +EA ++ +M +RG P F +
Sbjct: 486 EARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLL 545
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+ ++ E +L RG P Y L++ L+ GR E + + +
Sbjct: 546 SYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCA 605
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+ +Y +I F K+ ++ A EI M + P+ +N+L+ G+ K V + +
Sbjct: 606 PDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGV 665
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG-VPPNTITYNILIRSLC 371
++ G KP+ TFN ++ L + + + A EM+E VPP ++Y ILI L
Sbjct: 666 YDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLG 725
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
G V+ + FQ+M I P+ +T+ +LI S + +I +A+K M+ LG+ PD
Sbjct: 726 KAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQ 785
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
+YSALI LI S D A F M + GC P+ T ++ GR + + VK
Sbjct: 786 AYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDL-EAVKQH 844
Query: 492 KERGISFKS 500
+G++ ++
Sbjct: 845 FSQGVAMEA 853
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 217/453 (47%), Gaps = 4/453 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP+ Y AVID L+K+ I+ F+ MS C P R TY ++I G+C+ ++ +A
Sbjct: 393 GCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDA 452
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +QM G P+ TYT LIDGF A ++ E ++L++M + P T S+VHG
Sbjct: 453 CKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHG 512
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ ++A E++ + ER + +LL + A EA +L +M RG P+
Sbjct: 513 FCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPD 572
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + L + + E + D+ I++G P TY +++ K G L
Sbjct: 573 VILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILE 632
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K + + +YN ++D + K+ +D+A + M I PN VTFN L+ G KD
Sbjct: 633 LMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDG 692
Query: 305 EVHKTRELLVMLLECG-FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + L +LE P ++ +ID L +A R +A EM++ G+ P TY
Sbjct: 693 KTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTY 752
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI SL G + + +L + M ++PD+ ++ALI + ++ A F M+
Sbjct: 753 TSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMK 812
Query: 424 LGLRPDNFSYSALIKALIKSGR---FDEAKQTF 453
G P+ +Y L + +GR + KQ F
Sbjct: 813 RGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHF 845
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 136/521 (26%), Positives = 226/521 (43%), Gaps = 30/521 (5%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P+ YN VI L + +D AY F M + C+PD + LIHG C+ G
Sbjct: 49 MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 108
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L+ Q + P+V+ YT +I G+C A + F++LE M P+ A L+
Sbjct: 109 GHMLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLID 167
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +A+EL R + L + TL+ LSN+ EA + R+M +RGY P
Sbjct: 168 PLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEP 227
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
D + L ++E I T + + V Y LM+ K GR +G + L
Sbjct: 228 YLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLL 287
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + ++ +YN+++ F + N +D A E+ + + PN T+ T+I G
Sbjct: 288 LQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDA 347
Query: 304 AEVHKTR-----------------------------ELLVMLLECGFKPDKFTFNSMIDC 334
+ + + EL L G P+ + ++ID
Sbjct: 348 QRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDG 407
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
L +A R ED L +M P TY ++I LC + + ++F++M PD
Sbjct: 408 LLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPD 467
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
T+ LI F + +K+++A K MLT G P +Y +++ K +EAK+
Sbjct: 468 TITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIA 527
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
M + GC P + +L + +GR EEA+ ++ RG
Sbjct: 528 QMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARG 568
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 138/529 (26%), Positives = 228/529 (43%), Gaps = 34/529 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P N V++ L K+ ID A F +M C+P +YN +I G+ I +DEA
Sbjct: 15 GLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEA 74
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M G P+V +T LI GFC A + +V +L + P+ S++HG
Sbjct: 75 YKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKRFRPDVFLYTSVIHG 133
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D F++L + + L+ L EA + +M G L +
Sbjct: 134 YCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGD 193
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + L L+E C + I+RG +P L+ AL KAG+ E +
Sbjct: 194 YVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQ 253
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
V ++ ++ +YN ++D +CK+ +D ++ +M + D P++ T+N L++G +
Sbjct: 254 TVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRAN 313
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR-------FEDALDCLS-------- 349
+ EL +L G KP+ T+ ++I L A R F++ALD +S
Sbjct: 314 RLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGL 373
Query: 350 ----------EMVE----WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
E+ E G PN + Y +I L G + L+ F+ M P
Sbjct: 374 ADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTR 433
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
T+ +I C+ + A K F M+ G PD +Y+ LI K+ + DEA++
Sbjct: 434 TTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDV 493
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFPGL 504
M G P + T I+ + EA +++ +ERG PGL
Sbjct: 494 MLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCE----PGL 538
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 189/424 (44%), Gaps = 7/424 (1%)
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
++EAL +K+M G P+V I+++G C A+++ + + M P + +
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ +A++ ++ + TL++ +L + R
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR- 119
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ P+ + + DL+ IL+ + G P + Y +L++ L K GR E
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ K + + ++ +I+ +D A E+ REM +R P L ++LI
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK +V + E+ ++ + +NS++D C+ R +D L L +MVE P+
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDI 299
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
TYNIL+ + +L LF+ + + P+ T+ +IQ ++E+A KAFF
Sbjct: 300 QTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEA-KAFFD 358
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
D SY+ +IK L S R DEA + F ++ GC+P+ +++ L++ GR
Sbjct: 359 EAL-----DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGR 413
Query: 481 FEEA 484
E+
Sbjct: 414 IEDG 417
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 1/225 (0%)
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
M+ A + +EM + P++V N +++G CK ++ K EL + + G +P ++N+
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I L + ++A + M++ G P+ I + LI C G L + R
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQ-ALKR 119
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
PD++ + ++I +C+ ++ K ML G PD +Y LI L K GR DEA
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ F M ++GC D T ++E L G+ +EA ++ + ERG
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERG 224
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG++P + Y+A+I L+ S+ +D A+ FQ+M C P+ TY +L G G +
Sbjct: 778 LGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD 837
Query: 64 ALRLVKQMEGLGYA 77
L VKQ G A
Sbjct: 838 -LEAVKQHFSQGVA 850
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 226/490 (46%), Gaps = 35/490 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P +N ++DA ++ + A M KP TYN ++ G+CR G+ D+A
Sbjct: 126 VFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAW 185
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ K+M+ G AP+V ++TILI GFC + E ++ + M+ R + P+ + L+ G+
Sbjct: 186 EVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI-GL 244
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
F + A A LR+M G +P+
Sbjct: 245 F----------------------------------ARRGKMDHAMAYLREMRCFGLVPDG 270
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+ + +++ + D + G P TY L+ L K R ++ + LN
Sbjct: 271 VIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNE 330
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + + ++ ++ +I +C +D+A ++ M ++ + P++VT+NTLI G C+ +
Sbjct: 331 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 390
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ K +L + P+ T++ +ID C + EDA L EM+ G+ PN +TYN
Sbjct: 391 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 450
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+I+ C G+V++ + QKM +++SPD+ T+N LI + + +K+ A K M
Sbjct: 451 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 510
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
++PD +Y+ LI G EA F M G PD YT ++ V G +EA
Sbjct: 511 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 570
Query: 486 DIVKTSKERG 495
+ +RG
Sbjct: 571 QLHDEMLQRG 580
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 200/453 (44%), Gaps = 35/453 (7%)
Query: 79 NVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELL 138
N YT I++ +C A +V V+ M++R V P+ T +V FR D A L+
Sbjct: 94 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 153
Query: 139 IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTG 198
+ + + N++L L + M +A + ++M D G P+ +F +
Sbjct: 154 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 213
Query: 199 LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY 258
++ E I RG+KP ++ L+ + G+ YL + LV + Y
Sbjct: 214 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 273
Query: 259 NMVIDCFCKVNMMDRATEI-----------------------CRE------------MRD 283
MVI FC+ +M A + C+E MR+
Sbjct: 274 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 333
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
R + P+L TF TLI G+C + ++ K +L +L +PD T+N++ID +CR +
Sbjct: 334 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 393
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A D +M + PN +TY+ILI S C G V + +M I P+I T+N++I+
Sbjct: 394 ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIK 453
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+CR + K +K M+ + PD +Y+ LI IK + +A + ME+ P
Sbjct: 454 GYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQP 513
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
D T N+++ G +EA I + +GI
Sbjct: 514 DVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGI 546
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 196/443 (44%), Gaps = 7/443 (1%)
Query: 54 GICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCP 113
G CR +V L G P + +LI + +++ E F ++ + V
Sbjct: 6 GACRREIVSSLL-------GSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPI 58
Query: 114 NEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAIL 173
A +L+ + R PH A + N +++ + A++
Sbjct: 59 PAAASNALLAALSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVI 118
Query: 174 RKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
+M R P+ T + V D ++D+ + +G+KP TY +++ L ++
Sbjct: 119 SEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRS 178
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
G + + + +V S+ ++I FC+V ++ A +I +EMR R I P+LV+F
Sbjct: 179 GMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSF 238
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
+ LI + ++ L + G PD + +I CRA DAL EMV
Sbjct: 239 SCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVG 298
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
G P+ +TYN L+ LC + + L +M+ + PD+ TF LI +C K++K
Sbjct: 299 CGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDK 358
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A + F +ML LRPD +Y+ LI + + G D+A + M P+ T +++++
Sbjct: 359 ALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILID 418
Query: 474 TLVQQGRFEEAHDIVKTSKERGI 496
+ ++G+ E+A + +GI
Sbjct: 419 SHCEKGQVEDAFGFLDEMINKGI 441
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 187/448 (41%), Gaps = 50/448 (11%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G+ P +Y VI ++ + A +M C PD TYN L++G+C+ + +
Sbjct: 264 FGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLD 323
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+ +M G P++ T+T LI G+C ++ + ++ + M + + P+ T +L+
Sbjct: 324 AEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLID 383
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R D KA +L RE + + L+ +A L +M ++G LP
Sbjct: 384 GMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILP 443
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
TY +++ ++G +G ++L
Sbjct: 444 N-----------------------------------IMTYNSIIKGYCRSGNVSKGQKFL 468
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +++ ++ +YN +I + K + M A ++ M + P++VT+N LI+G
Sbjct: 469 QKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVH 528
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV----PPN 359
V + + + G +PD++T+ SMI+ A ++A EM++ G
Sbjct: 529 GNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKEKRRAAG 588
Query: 360 TITYNILIRSLCAIGDVARSLRL------FQKMQADRISPDIYTFNALIQSFCRMN---- 409
T+ + + S ++ + L++ F K Q I + F AL +S +N
Sbjct: 589 TVQFVNIQNSAESLKQMPMDLKVTCSIYFFAKTQEFAIRGCAFVFGALEKSSTPLNFQGT 648
Query: 410 -KIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+E K +L + PD ++ +
Sbjct: 649 RSLEDHWKILVGLLGSLVHPDAPGFAEV 676
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 40/235 (17%)
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
RE++ LL P F+ +I ++ + +A + +++ VP N L+ +
Sbjct: 10 REIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAA 69
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR----------MNKIEK------ 413
L G + ++ + + + YT N ++ ++C+ ++++EK
Sbjct: 70 LSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPD 129
Query: 414 ----------------AEKAFF---SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
AE A SM++ GL+P +Y++++K L +SG +D+A + F
Sbjct: 130 VVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFK 189
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI-----SFKSFPGL 504
M+ G PD + +++ + G EEA I K + RGI SF GL
Sbjct: 190 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGL 244
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 238/481 (49%), Gaps = 5/481 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP+ + V+ AL N +D A + M+ C P+ Y LIH + + V EA
Sbjct: 213 GVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEA 272
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L+++M +G P+V T+ +I G C ++ + ++++ M R P+ T L+HG
Sbjct: 273 LKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHG 332
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK-MGDRGYLP 183
+ R ++A ++LI+ P + NTL+ + EA + L + M + G+ P
Sbjct: 333 LCRIGKLNEARKILIKI----PCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQP 388
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + L L+ +++ +RG +P TY +L+ L KAG E L
Sbjct: 389 DIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVL 448
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + L N YN +I C+ + A + EM + P+L T+N+LI G CK
Sbjct: 449 HEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKV 508
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + L +L G + T+N++I L R F+ AL +++M+ G + ITY
Sbjct: 509 DRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITY 568
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI++ C +G++ + L L+++M D + D + N +I C++ K++ A + +
Sbjct: 569 NGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAIN 628
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G PD +Y++++ L K GR EA F ++ G PD++T N + ++G +
Sbjct: 629 RGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVND 688
Query: 484 A 484
A
Sbjct: 689 A 689
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 226/495 (45%), Gaps = 5/495 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ + Y+ V++ LV N +A F M P FT+ I++ +C VD A L
Sbjct: 181 PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSL 240
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ M G PN Y LI +V+E ++LE M P+ T ++HG+ +
Sbjct: 241 LRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCK 300
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
H A +L+ R + R + LL+ L +EA IL K+ P ++
Sbjct: 301 VNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAI 356
Query: 188 FDYTVTCLVTGLDLNETCGIL-DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ + V L E L +T I G +P TY +LM L K G +N +
Sbjct: 357 LNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEM 416
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ NV +Y ++++ CK +++ A + EM R + N V +N LI C+ +V
Sbjct: 417 SRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKV 476
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
H LL + G KPD FT+NS+I LC+ R ++A M+ G N +TYN L
Sbjct: 477 HVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTL 536
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I +L G ++L L M + D T+N LI++FC++ IEK + + M+ GL
Sbjct: 537 IHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGL 596
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
D S + +I L K G+ D A + G PD T N +L L + GR +EA +
Sbjct: 597 GADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALN 656
Query: 487 IVKTSKERGISFKSF 501
+ + G+ +F
Sbjct: 657 LFDRLQVEGVRPDAF 671
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 213/475 (44%), Gaps = 40/475 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P++ +Y +I AL + N + A ++M V C PD T+N +IHG+C++ + +A
Sbjct: 248 GCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDA 307
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+LV +M G+ P+ TY L+ G C ++ E ++L + CPN A + +L++G
Sbjct: 308 TKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILNTLING 363
Query: 125 VFRC--LDPHKAF--ELLIRF-------------------------------MEREPLTQ 149
L ++F E +I F M R
Sbjct: 364 YVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEP 423
Query: 150 KLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
++ +L L + EA +L +M RG S ++ + L ++ +L
Sbjct: 424 NVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLL 483
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+G KP TY L+ L K R E R +++ D V+N +YN +I +
Sbjct: 484 SEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRR 543
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+A + +M R + +T+N LI CK + K EL ++ G D +
Sbjct: 544 GAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISC 603
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N MI+ LC+ + ++A + L + + G P+ +TYN ++ LC +G + +L LF ++Q
Sbjct: 604 NIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQV 663
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+ + PD +T+N I C+ + A F+ + G P N +++ L+ L+K
Sbjct: 664 EGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQ 718
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 153/351 (43%), Gaps = 2/351 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P YN ++ L K S+ A +MS C+P+ TY IL++G+C+ G+++E
Sbjct: 384 FGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEE 443
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ +M G N Y LI C ++V +L M + P+ T SL++
Sbjct: 444 AGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIY 503
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +AF L + + + NTL++ L +A ++ M RG
Sbjct: 504 GLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTL 563
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + ++ + + + I G+ + +++ L K G+ +L
Sbjct: 564 DKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFL 623
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
V ++ +YN V++ CKV + A + ++ + P+ T+NT IS CK+
Sbjct: 624 RDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKE 683
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
V+ +E GF P T+N ++ L + E+ L E+ W
Sbjct: 684 GMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL--W 732
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 114/288 (39%), Gaps = 76/288 (26%)
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL-----VMLLECGFKPDKFTFNSMIDC 334
+M++ I F ++ + K + + LL V L E FK +++ +++
Sbjct: 137 QMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFK----SYDLVLEI 192
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD------------------- 375
L + + A + +M+ GV P T+ I++++LC +
Sbjct: 193 LVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPN 252
Query: 376 ----------------VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
V+ +L+L ++M PD+ TFN +I C++NKI A K
Sbjct: 253 SIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVD 312
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAK----------------------------- 450
ML G PDN +Y L+ L + G+ +EA+
Sbjct: 313 RMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKE 372
Query: 451 -QTFL--SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
Q+FL +M G PD +T N+++ L ++G A D+V RG
Sbjct: 373 AQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRG 420
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 4/164 (2%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G + YN +I A K +I+ ++QM +D D + NI+I+G+C++G VD
Sbjct: 558 FRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVD 617
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A ++ G+ P++ TY +++G C R+ E + + ++ V P+ T + +
Sbjct: 618 NAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677
Query: 123 HGVFRCLDP--HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNS 164
++C + + A R +E + L N L+Y L S
Sbjct: 678 S--WQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQS 719
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 237/495 (47%), Gaps = 2/495 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN VI+ L K + A F++M +CKP+ T++ LI G C+ G V+E L
Sbjct: 162 PDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGL 221
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+++ME +G +V+ Y+ LI GFC+ + + M +NV PN T L++ + +
Sbjct: 222 LEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCK 281
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+A ++L + + L LS N AS+A +L M RG P + T
Sbjct: 282 KQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVT 341
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + L +++ GIL+T K+G KP TY L++ L G+ E LN +
Sbjct: 342 YNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLM 401
Query: 248 KD--RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ +V ++N+VI CK + A + M +R N+VT+N LI G+ +
Sbjct: 402 SKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGK 461
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ K EL ++ G P+ T+ +I+ LC+ A ++ G P YN
Sbjct: 462 LTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNT 521
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L+ SLC V ++ LFQ+M+ PD+ +FN +I + +E A++ ML +
Sbjct: 522 LMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMN 581
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
L PDN ++S LI +K G+ DEA + M G PD+ + +L+ +G+ E+
Sbjct: 582 LVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVV 641
Query: 486 DIVKTSKERGISFKS 500
+++ ++ + S
Sbjct: 642 SMLQQMADKDVVLDS 656
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 131/515 (25%), Positives = 214/515 (41%), Gaps = 39/515 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS N +ID L K+ D +M+ P + + LI A +
Sbjct: 57 PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNA---------------------------------- 93
+ + G+ NVY + +L+ GFC +
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176
Query: 94 -KRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL- 151
KR+ E + + MK PN T +L+ G + D + F LL ME+ L +
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLL-EEMEKMGLEGDVF 235
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
V + L+ + + +M + P T+ + L E +LDT
Sbjct: 236 VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM 295
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
V+P Y +L + L K GR + + L+ + K N +YN +I+ CK +
Sbjct: 296 TGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRV 355
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF--KPDKFTFN 329
D A I M + P++VT++TL+ G C ++ + +LL +L+ F KPD F FN
Sbjct: 356 DDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFN 415
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+I LC+ R A MVE G P N +TYNILI + G + ++L L++
Sbjct: 416 LVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDS 475
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
ISP+ T+ LI C+M + A+ F G RP Y+ L+ +L + ++A
Sbjct: 476 GISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQA 535
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ F M +PD + N+I++ ++ G E A
Sbjct: 536 RNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESA 570
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/479 (22%), Positives = 203/479 (42%), Gaps = 37/479 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ +Y+A+I I+ F +M P+ TY+ L++ +C+ E
Sbjct: 228 MGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKE 287
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +++ M G P+V YT+L DG R ++ +VL++M +R PN T ++++
Sbjct: 288 AAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIIN 347
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G L +A IL M +G P
Sbjct: 348 G-----------------------------------LCKEGRVDDALGILETMAKKGKKP 372
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKR--GVKPRFSTYLLLMEALYKAGRDVEGDR 241
+ T+ V L ++E +L+ + + +KP + L+++ L K R R
Sbjct: 373 DVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKR 432
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + SN+ +YN++ID + + +A E+ ++ D I+PN T+ LI+G C
Sbjct: 433 VYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLC 492
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + + L G +P +N+++ LCR E A + EM P+ +
Sbjct: 493 KMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVV 552
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
++NI+I GDV + L +M + PD TF+ LI F ++ ++++A + M
Sbjct: 553 SFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERM 612
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
++ G PD + +L+K G+ ++ M DS ++ IL L +
Sbjct: 613 VSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSK 671
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 156/336 (46%)
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
CNTL+ L ++ KM P ++ + V + G+L +
Sbjct: 62 CNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIM 121
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
KRG + LL++ ++G + + ++ L+ + SYN VI+ CK +
Sbjct: 122 KRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLV 181
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A E+ +EM+ + PN VTF+ LI G CK+ +V + LL + + G + D F ++++I
Sbjct: 182 EAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALI 241
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
C E + +EM+ V PN +TY+ L+ +LC + ++ M ++
Sbjct: 242 SGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVR 301
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PD+ + L + + A K M+ G P+N +Y+A+I L K GR D+A
Sbjct: 302 PDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGI 361
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+M + G PD T + +++ L G+ +EA D++
Sbjct: 362 LETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLL 397
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 146/280 (52%)
Query: 216 VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT 275
V P F++ L+E+ + L + K NV ++N+++ FC+ +A
Sbjct: 90 VFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAM 149
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
++ M+ + P+ V++NT+I+G CK + + +EL + KP+ TF+++ID
Sbjct: 150 DLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGF 209
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
C+ E+ L EM + G+ + Y+ LI C+ GD+ R LF +M ++P++
Sbjct: 210 CKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNV 269
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
T++ L+ + C+ K ++A + +M +RPD +Y+ L L K+GR +A +
Sbjct: 270 VTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDL 329
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
M + G P++ T N I+ L ++GR ++A I++T ++G
Sbjct: 330 MVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKG 369
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 190/425 (44%), Gaps = 5/425 (1%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P+ Y+ +++AL K A M+ + +PD Y +L G+ + G +A+
Sbjct: 265 VTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAI 324
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+++ M G PN TY +I+G C RV + +LE M ++ P+ T +LV G+
Sbjct: 325 KVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGL 384
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVC--NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+A +LL M +E + V N ++ L A + M +RG+
Sbjct: 385 CGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPS 444
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + ++ L + + + G+ P +TY +L+ L K
Sbjct: 445 NIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLF 504
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N V+ YN ++ C+ + +++A + +EMR+ + P++V+FN +I G K
Sbjct: 505 NKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKA 564
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V +ELL+ +L PD TF+ +I+ + + ++A MV G P+ + +
Sbjct: 565 GDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLF 624
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK---IEKAEKAFFS 420
+ L++ G + + + Q+M + D + ++ C M+K IEK F
Sbjct: 625 DSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKFSQ 684
Query: 421 MLTLG 425
++G
Sbjct: 685 HTSVG 689
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 115/255 (45%), Gaps = 2/255 (0%)
Query: 238 EGDRYLNHVFKD--RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
E + +H +D + + +S N +ID K D + +M + P + +
Sbjct: 40 ESLSHFHHTLQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSA 99
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
LI + +L ++++ GF + + FN ++ C++ A+D M
Sbjct: 100 LIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNC 159
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ P+ ++YN +I LC + + LF++M+ P+ TF+ALI FC+ +E+
Sbjct: 160 LIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGF 219
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
M +GL D F YSALI G + K+ F M + P+ T + ++ L
Sbjct: 220 GLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNAL 279
Query: 476 VQQGRFEEAHDIVKT 490
++ +++EA ++ T
Sbjct: 280 CKKQKWKEAAQMLDT 294
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN ++ +L + +S++ A FQ+M PD ++NI+I G + G V+ A
Sbjct: 511 GTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESA 570
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M + P+ T++ILI+ F ++ E + E M P+ SL+ G
Sbjct: 571 KELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKG 630
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
K +L + +++ + + +T+L L N S + IL K
Sbjct: 631 YSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKILPK 681
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 239/497 (48%), Gaps = 8/497 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG++P+ YN +I L KS +D AY ++M ++ P TY++ I+G+ ++ +DE
Sbjct: 285 LGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDE 344
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++K+M LG+ PN Y LIDG+C ++E ++ + M + + PN T+ SL+
Sbjct: 345 ANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQ 404
Query: 124 GVFRCLDPHKAFELLIRFMERE-PLTQ---KLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
G + +A +L + R P+ Q +V N L + A +R+M R
Sbjct: 405 GFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFR----FVTALHFIREMLLR 460
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
P V+ L E + + +G P T L+ L KAG E
Sbjct: 461 NLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQET 520
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ L + + LV + +YN +I CK + E+ EM + I P++ TFN L+ G
Sbjct: 521 LKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHG 580
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
C ++ + L + G+ P+ +T+ MID C+A++ E+ + L+E+V + N
Sbjct: 581 LCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELN 640
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
++ YN LIR+ C G++ + RL M++ + T+++L+ C + ++ A+
Sbjct: 641 SVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLD 700
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M GL P+ Y+ +I K G+ ++ M + +P+ +T ++++ + G
Sbjct: 701 EMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLG 760
Query: 480 RFEEAHDIVKTSKERGI 496
+ +EA ++ E+GI
Sbjct: 761 KTKEAAKLLNEMTEKGI 777
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/479 (26%), Positives = 222/479 (46%), Gaps = 35/479 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+SPS Y+ I+ L+K ID A ++MS P+ YN LI G C++G + EAL
Sbjct: 322 VSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEAL 381
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM------------------- 106
++ M G +PN T LI GFC + ++ + VLE M
Sbjct: 382 KIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWL 441
Query: 107 -------------KE---RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQK 150
+E RN+ PN+ + +LV G+ + +A EL R + + +
Sbjct: 442 CLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNI 501
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
+ N L++ L E +LR M +RG + + T++ ++ + E + +
Sbjct: 502 VTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEE 561
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
+K+G++P T+ LL+ L A + E R + K+ V NV +Y ++ID +CK N
Sbjct: 562 MVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANK 621
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
++ + E+ + + N V +N+LI +C + ++ L + G T++S
Sbjct: 622 VEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSS 681
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
++ LC +DA L EM + G+ PN + Y +I +G + + + Q+M +
Sbjct: 682 LMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHN 741
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
I P+ +T+ +I FC++ K ++A K M G+ PD +Y+A L K G+ +EA
Sbjct: 742 IHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEA 800
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 221/492 (44%), Gaps = 35/492 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS + ++ +LVK+N + +Y + + + PD ++ +I+ C+ D+A
Sbjct: 216 GLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDA 275
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +ME LG APNV TY +I G C + R+ E +R E M + V P+ T ++G
Sbjct: 276 IGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFING 335
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +E+ EA +L++M + G++P
Sbjct: 336 LIK--------------LEK---------------------IDEANCVLKEMSELGFVPN 360
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + +++E I D + +G+ P T L++ K+ + + + L
Sbjct: 361 EVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLE 420
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L N S++MVI+ C A REM R++ PN TL+SG CK
Sbjct: 421 EMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAG 480
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + EL LL GF P+ T N++I LC+A ++ L L +M+E G+ + ITYN
Sbjct: 481 KQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYN 540
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C G V L ++M I PDIYTFN L+ C +KI++A + +
Sbjct: 541 TLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKN 600
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G P+ ++Y +I K+ + +E + + +S N ++ G A
Sbjct: 601 GYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAA 660
Query: 485 HDIVKTSKERGI 496
+ K RG+
Sbjct: 661 FRLRDDMKSRGV 672
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 157/330 (47%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
AA + + +G P T + ++ LV +L ++ + D G+ P + ++
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
A K R+ + + + K + NV +YN +I CK +D A +M ++P
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+L+T++ I+G K ++ + +L + E GF P++ +N++ID C+ +AL
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
+M+ G+ PN++T N LI+ C + ++ + ++M + + +F+ +I C
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLK 444
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+ A ML LRP++ + L+ L K+G+ EA + + + G P+ TS
Sbjct: 445 FRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTS 504
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGISF 498
N ++ L + G +E +++ ERG+ F
Sbjct: 505 NALIHGLCKAGNMQETLKLLRDMLERGLVF 534
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 134/287 (46%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN +I K + + ++M +PD +T+N+L+HG+C +DEA RL + +
Sbjct: 539 YNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECK 598
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
GY PNVYTY ++IDG+C A +V E +L + + + N SL+ + +
Sbjct: 599 KNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMN 658
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
AF L R L ++L++ L N + +A +L +M G LP + +
Sbjct: 659 AAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTII 718
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+N+ +L + P TY ++++ K G+ E + LN + + ++
Sbjct: 719 GGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGIL 778
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ +YN + CK ++ A ++C EM + + +T+ TLI G
Sbjct: 779 PDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y +I K ++ + Q+MS P++FTY I+I G C++G EA
Sbjct: 706 GLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEA 765
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L+ +M G P+ TY +G C +V E F+V + M VC +E T +L+ G
Sbjct: 766 AKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825
Query: 125 VFRCLDPHKA 134
C P A
Sbjct: 826 ---CHQPSTA 832
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 81/155 (52%)
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
F A D S + + G+ P+ T L+ SL ++ +S ++ + I PD++ F+
Sbjct: 202 FGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFST 261
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
+I +FC+ ++ + A F M LG+ P+ +Y+ +I L KSGR DEA + M +
Sbjct: 262 MINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEK 321
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+P T ++ + L++ + +EA+ ++K E G
Sbjct: 322 VSPSLITYSVFINGLIKLEKIDEANCVLKEMSELG 356
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/497 (27%), Positives = 238/497 (47%), Gaps = 6/497 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ I P YN +I+ L K ++ A +M C+P+ FTY IL+ G+C+ G V+E
Sbjct: 4 INILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEE 63
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+RL+ +M+ G +V Y+ LI GFC+ + + + M E+ + PN L++
Sbjct: 64 AMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLIN 123
Query: 124 GVFRCLDPHKAFELLIRFMER--EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
G + +A +L ER +P C ++ L + A +A + M ++G
Sbjct: 124 GFCKKGLWREATAVLHTMTERGIQPDVYTYTC--MIGGLCKDGRARKALDLFDLMTEKGE 181
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P + T++ + L + + I +T +++G + +Y L+ L G+ E +
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMK 241
Query: 242 YLNHVFKDR--LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + +D + +V ++N VI CK +D+A EI M +R NL T + LI
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGE 301
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ K + K EL + + G P T++ MID C+ H A S M G+ P
Sbjct: 302 YIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPT 361
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
YN L+ SLC + ++ RLFQ+M+ PD +FN +I + I A++
Sbjct: 362 LFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLN 421
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M +GL PD ++YS+ I L K G+ +EAK F SM +G PD++ + +++
Sbjct: 422 DMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLND 481
Query: 480 RFEEAHDIVKTSKERGI 496
EE ++++ + G+
Sbjct: 482 EIEEVINLLRQMADMGV 498
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 230/463 (49%), Gaps = 14/463 (3%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
PD +YN +I+G+C+ +++A+ L+ +MEG PN +TY IL+DG C RV E R+
Sbjct: 8 PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67
Query: 103 LEIMKERNVCPNEATVRSLVHGVFR--CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
L MK + + + +L+ G CLD KA L +E+ +V + L+
Sbjct: 68 LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKA--LFDEMLEKGISPNVVVYSCLINGF 125
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGV 216
+ EA A+L M +RG P+ YT TC++ GL + + D ++G
Sbjct: 126 CKKGLWREATAVLHTMTERGIQPDV----YTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
+P TY +L+ L K G + + + + V SYN +I C +D A +
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMK 241
Query: 277 ICREMRDRD--IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ + + + P+++TFNT+I G CK+ + K E+ ++E G + FT + +I
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGE 301
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
++ + A++ + + G+ P++ TY+++I C + + + LF +M+ +SP
Sbjct: 302 YIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPT 361
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
++ +N L+ S C+ + +E+A + F M PD S++ +I +K+G AK+
Sbjct: 362 LFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLN 421
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M+Q G PD+YT + + L + G+ EEA + GI+
Sbjct: 422 DMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGIT 464
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 214/437 (48%), Gaps = 10/437 (2%)
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M+ + P++ +Y +I+G C KR+ + +L M+ + PN T L+ G+ +
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A LL + +V +TL+ + A+ +M ++G P +
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVY-- 118
Query: 191 TVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+CL+ G E +L T +RG++P TY ++ L K GR + + +
Sbjct: 119 --SCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLM 176
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ + +YN++I+ CK + A +I M ++ +V++NTLI G C + ++
Sbjct: 177 TEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKL 236
Query: 307 HKTRELLVMLLECG--FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +L LLE G +PD TFN++I LC+ R + A++ M+E G N T +
Sbjct: 237 DEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCH 296
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
ILI G + +++ L++++ + P T++ +I FC+M+ + A+ F M
Sbjct: 297 ILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKIS 356
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL P F Y+ L+ +L K ++A++ F M+++ C PD+ + N++++ ++ G A
Sbjct: 357 GLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSA 416
Query: 485 HDIVKTSKERGISFKSF 501
+++ ++ G++ ++
Sbjct: 417 KELLNDMQQMGLTPDAY 433
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 197/439 (44%), Gaps = 37/439 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ +Y+ +I +D F +M P+ Y+ LI+G C+ G+ EA
Sbjct: 75 GLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREA 134
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ M G P+VYTYT +I G C R + + ++M E+ P+ T L++G
Sbjct: 135 TAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLING 194
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG-YL- 182
+ + AF++ +E+ + + NTL+ L NN EA + + + G Y+
Sbjct: 195 LCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVE 254
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ TF+ + L L++ I DT I+RG T +L+ K+G +
Sbjct: 255 PDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMEL 314
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMM------------------------------- 271
V K LV + +Y+++ID FCK++M+
Sbjct: 315 WKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCK 374
Query: 272 ----DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
++A + +EM++ + P+ ++FN +I G K ++H +ELL + + G PD +T
Sbjct: 375 ESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYT 434
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
++S I+ L + + E+A M+ G+ P+ Y+ LI+ ++ + L ++M
Sbjct: 435 YSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMA 494
Query: 388 ADRISPDIYTFNALIQSFC 406
+ D+ N+++ C
Sbjct: 495 DMGVILDLEITNSILTFLC 513
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G++P Y++ I+ L K ++ A F M PD Y+ LI G ++E
Sbjct: 426 MGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEE 485
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
+ L++QM +G ++ ++ CN+ AE V+E++
Sbjct: 486 VINLLRQMADMGVILDLEITNSILTFLCNS---AEHLHVMELL 525
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 224/492 (45%), Gaps = 35/492 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS + N ++ +LVK+N + ++Y F M PD + ++ +++ C G VD+A
Sbjct: 157 GLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDA 216
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L ++ME +G APNV TY +I G C R+ E F+ E M++ V P+ T L++G
Sbjct: 217 IELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLING 276
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + L RF EA IL++M DRGY P
Sbjct: 277 LVK----------LERF-------------------------DEANCILKEMSDRGYAPN 301
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ + +++ I D I G+ P T L++ K+ + + L
Sbjct: 302 NVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLE 361
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ V N ++ VI C D A EM R+ PN L+SG C++
Sbjct: 362 EMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNG 421
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + EL LLE GF + T N++I LC A E+A L EM+E G+ ++I+YN
Sbjct: 422 KQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYN 481
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI + C G V +L ++M I PD+YT+N L+ C M KIE+A +
Sbjct: 482 TLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKN 541
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G PD ++Y +I K+ R +E ++ F M ++ ++ + G EA
Sbjct: 542 GNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREA 601
Query: 485 HDIVKTSKERGI 496
+ + RGI
Sbjct: 602 FRLRDDMRSRGI 613
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/534 (25%), Positives = 236/534 (44%), Gaps = 43/534 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G++P+ YN +I L K+ +D A+ ++M ++ KP TY +LI+G+ ++ DE
Sbjct: 226 VGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDE 285
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++K+M GYAPN Y LIDG+C ++ ++ + M + PN T SL+
Sbjct: 286 ANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQ 345
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + A LL + + + ++++RL A + +M R + P
Sbjct: 346 GYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKP 405
Query: 184 ESSTFDYTVTCLVTGLDLN----ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
D +T LV+GL N E + +++G T L+ L +AG E
Sbjct: 406 N----DGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEA 461
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ L + + LV + SYN +I CK ++ ++ EM R I P++ T+N L+ G
Sbjct: 462 AKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHG 521
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
C ++ + L + G PD +T+ MID C+A+R E+ EMV + N
Sbjct: 522 LCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQN 581
Query: 360 TITYNILIRSLCAIGDVARSLR-----------------------------------LFQ 384
+ Y LIR+ C G++ + R L
Sbjct: 582 AVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLD 641
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+M+ + +SP++ + ALI +C++ ++ K + M + P+ +Y+ +I K G
Sbjct: 642 EMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLG 701
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
A + M Q G PD+ T N + ++G+ EEA + GIS
Sbjct: 702 NMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISL 755
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/503 (24%), Positives = 220/503 (43%), Gaps = 35/503 (6%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ PS Y +I+ LVK D A ++MS P+ YN LI G CRIG + AL
Sbjct: 263 VKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTAL 322
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE----------------- 108
++ M G +PN T LI G+C + ++ +LE M
Sbjct: 323 QIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRL 382
Query: 109 ------------------RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQK 150
RN PN+ + LV G+ + +A EL R +E+
Sbjct: 383 CLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANT 442
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
+ N L++ L EAA +L++M +RG + +S +++ + + E + +
Sbjct: 443 VTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEE 502
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
++RG++P TY +L+ L G+ E + K+ + +Y ++ID +CK N
Sbjct: 503 MVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANR 562
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
++ ++ +EM I N V + TLI +C++ + + L + G T++S
Sbjct: 563 VEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSS 622
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I L + A L EM + G+ PN + Y LI C +G + + + Q+M +
Sbjct: 623 LIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINN 682
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ P+ T+ +I C++ ++ A K M G+ PD +Y+AL K G+ +EA
Sbjct: 683 VHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEAL 742
Query: 451 QTFLSMEQNGCNPDSYTSNLILE 473
+ M G + D T +++
Sbjct: 743 KVCDLMSTGGISLDDITYTTLID 765
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 187/436 (42%), Gaps = 35/436 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP++ N++I KSN ++ A ++M ++ T+ +IH +C D A
Sbjct: 332 GISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSA 391
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + +M + PN T+L+ G C + +E + + E+ N T +L+HG
Sbjct: 392 LLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHG 451
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +LL +ER + + NTL+ E + +M RG P+
Sbjct: 452 LCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPD 511
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L + E G+ K G P TY ++++ KA R EG++
Sbjct: 512 MYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQ 571
Query: 245 HVFKDRLVSNVNSYNMVIDCFCK-----------------------------------VN 269
+ ++ N Y +I +C+ +
Sbjct: 572 EMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIG 631
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
++D A ++ EMR ++PN+V + LI G+CK ++HK +L + P+K T+
Sbjct: 632 LVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYT 691
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
MI+ C+ + A L+EM + G+ P+ +TYN L C G + +L++ M
Sbjct: 692 IMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTG 751
Query: 390 RISPDIYTFNALIQSF 405
IS D T+ LI +
Sbjct: 752 GISLDDITYTTLIDGW 767
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 181/404 (44%), Gaps = 4/404 (0%)
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
VF + ++ + + P+ T L+ + + + ++++ + +T++
Sbjct: 146 VFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVN 205
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
+A + RKM G P T++ + L L+E + K VKP
Sbjct: 206 AFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKP 265
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
TY +L+ L K R E + L + N YN +ID +C++ + A +I
Sbjct: 266 SLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIR 325
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
+M I+PN VT N+LI G+CK ++ LL +L G ++ TF S+I LC
Sbjct: 326 DDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLK 385
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
RF+ AL + EM+ PN +L+ LC G + ++ L+ ++ + + T
Sbjct: 386 CRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTS 445
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
NALI C E+A K ML GL D+ SY+ LI A K G+ +E + M +
Sbjct: 446 NALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVR 505
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFP 502
G PD YT N++L L G+ EEA + K+ G +FP
Sbjct: 506 RGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNG----NFP 545
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 140/303 (46%), Gaps = 9/303 (2%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN +I A K ++ + ++M +PD +TYN+L+HG+C +G ++EA L + +
Sbjct: 480 YNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECK 539
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G P+ YTY I+IDG+C A RV E ++ + M + N +L+ +
Sbjct: 540 KNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMR 599
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+AF L R ++L++ LSN + A +L +M G P +
Sbjct: 600 EAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCY---- 655
Query: 193 TCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
T L+ G +++ IL V P TY +++ K G + LN + +
Sbjct: 656 TALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQ 715
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+V + +YN + + FCK M+ A ++C M I+ + +T+ TLI G K V
Sbjct: 716 KGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHKPLTV-S 774
Query: 309 TRE 311
+RE
Sbjct: 775 SRE 777
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 83/155 (53%)
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
F + S + G+ P+ T N L+ SL +V S ++F M ++PD+Y F+
Sbjct: 143 FGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFST 202
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
++ +FC +++ A + F M +G+ P+ +Y+ +I L K+GR DEA Q ME+
Sbjct: 203 MVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKER 262
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
P T +++ LV+ RF+EA+ I+K +RG
Sbjct: 263 VKPSLVTYGVLINGLVKLERFDEANCILKEMSDRG 297
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S + P+ Y +I+ K ++ A +M+ PD TYN L +G C+ G
Sbjct: 678 MSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGK 737
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGF 90
++EAL++ M G + + TYT LIDG+
Sbjct: 738 MEEALKVCDLMSTGGISLDDITYTTLIDGW 767
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/507 (25%), Positives = 236/507 (46%), Gaps = 36/507 (7%)
Query: 25 SIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG-VVDEALRLVKQMEGLGYAPNVYTY 83
+ID A F M + P + L+ I ++G D + L KQME G +PN+YT
Sbjct: 77 NIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTL 136
Query: 84 TILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME 143
+ILI+ F + +RV F VL + + + P T +L++ + + +A EL +
Sbjct: 137 SILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVA 196
Query: 144 REPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
R T++ L + AA +L+KM + G P T+ + +NE
Sbjct: 197 RGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNE 256
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
I +G+ P TY L++ L + E LN + ++ ++ ++N+++D
Sbjct: 257 ALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVD 316
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
CK + A + + M + + P++VT+++L+ G+ +EV + R+L ++ G KP
Sbjct: 317 TICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKP 376
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV------- 376
D F++N +I+ C+ R ++A +EM+ G+ PN ++YN LI LC +G +
Sbjct: 377 DVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLF 436
Query: 377 ----------------------------ARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
++ RLF+ MQ+ P++ +N LI + C+
Sbjct: 437 KNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKS 496
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+ A K F + GL+P+ Y+ +I L K G DEA + F +ME++GC PD +
Sbjct: 497 GNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISY 556
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERG 495
N+I+ + A ++ +++G
Sbjct: 557 NVIIRGFLHHKDESRAVQLIGEMRDKG 583
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 211/465 (45%), Gaps = 35/465 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ + +I+ L K A F M C+PD +TY +I+G+C+IG
Sbjct: 162 LGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAA 221
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+K+ME G PNV TY+ +ID +RV E + MK + + P+ T SL+
Sbjct: 222 AAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQ 281
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G L N S EA+A+L +M +P
Sbjct: 282 G-----------------------------------LCNFSQWKEASALLNEMRSLNIMP 306
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF+ V + ++E G+L T + GV+P TY LM VE +
Sbjct: 307 DIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLF 366
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +V SYN++I+ +CKV +D A ++ EM + + PN V++NTLI G C+
Sbjct: 367 DAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQL 426
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + R L + G P+ FT++ ++D C+ F A M PN + Y
Sbjct: 427 GSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMY 486
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NILI ++C G++ + +LF ++ + P+ + +I C+ +++A +AF +M
Sbjct: 487 NILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEE 546
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
G PD SY+ +I+ + A Q M G D T+
Sbjct: 547 DGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGTT 591
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 128/255 (50%), Gaps = 1/255 (0%)
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMM-DRATEICREMRDRDIAPNLVTFNTLISGHC 301
NH+ + + + + ++ K+ D + ++M ++PN+ T + LI+
Sbjct: 85 FNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFS 144
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
V +L +++ G +P TF ++I+ LC+ +F A++ +MV G P+
Sbjct: 145 HLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVY 204
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY +I LC IG+ A + L +KM+ P++ T++ +I S + ++ +A F M
Sbjct: 205 TYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYM 264
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G+ PD F+Y++LI+ L ++ EA M PD T N++++T+ ++G+
Sbjct: 265 KVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKV 324
Query: 482 EEAHDIVKTSKERGI 496
EA ++KT E G+
Sbjct: 325 SEAQGVLKTMTEMGV 339
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 1/176 (0%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW-GVPPNTITYNILIRSLCAIGDVARSLR 381
P F ++ + + ++ D + L++ +E G+ PN T +ILI + V +
Sbjct: 95 PCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFS 154
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
+ K+ + P I TF LI C++ K +A + F M+ G RPD ++Y+ +I L
Sbjct: 155 VLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLC 214
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
K G A ME+ GC P+ T + I+++ + R EA DI K +GIS
Sbjct: 215 KIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGIS 270
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 223/463 (48%), Gaps = 14/463 (3%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P Y ++I ++ +D A+ F +M D C P+ TY+ LI+G+C G + EA+
Sbjct: 228 LCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAM 287
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
++++M G P VYTYT+ I C+ RV + ++ M ++ P+ T +++ G+
Sbjct: 288 DMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGL 347
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE-----AAAILRKMGDRG 180
FR EL I M + L + LV NT+ Y N + +E A I M G
Sbjct: 348 FRA----GKMELAIG-MYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHG 402
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
L + T++ + L D+ + + + +K G P TY L+ K G
Sbjct: 403 TLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNAT 462
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
R+L + + + +Y +I FCK +D AT EM I+PN T+ +I G+
Sbjct: 463 RFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGY 522
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ ++ L + E G T+N++I L + +RF +A ++M E G+ PNT
Sbjct: 523 CKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNT 582
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITY LI LC + ++F +M+ P+ +T+ +LI C+ K++ AE+
Sbjct: 583 ITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAER---- 638
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ G P +YS L+ L + GR +EA Q +M++ G +P
Sbjct: 639 LTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSP 681
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 226/493 (45%), Gaps = 37/493 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKPDRFTYNILIHGICRIGVVDE 63
G+ PS +N +I+ L K + A L F ++ D C PD FTY LI G CR +D+
Sbjct: 192 GVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLC-PDAFTYTSLILGHCRNRKLDK 250
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + +M G PN TY+ LI+G CN R+ E +LE M E+ + P T
Sbjct: 251 AFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTV--- 307
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
P++ L + +A ++R MG +G P
Sbjct: 308 ----------------------PISS----------LCDIGRVDDAINLVRSMGKKGCSP 335
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ ++ L + G+ +K G+ P TY L+ L GR +
Sbjct: 336 SVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIF 395
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + ++N +YN +I ++ +++A + +M +P +VT+NTLI + K
Sbjct: 396 DWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKR 455
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ L M+ E +PD+ T+ +I C+ + + A EM++ G+ PN TY
Sbjct: 456 GYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTY 515
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+I C G + +L LF++M+ + S I T+NA+I + N+ +AEK M
Sbjct: 516 TAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTE 575
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL+P+ +Y++LI L K+ + A + F ME+ C P+++T ++ L Q+G+ +
Sbjct: 576 QGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDA 635
Query: 484 AHDIVKTSKERGI 496
A + + E I
Sbjct: 636 AERLTENGCEPTI 648
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 208/475 (43%), Gaps = 4/475 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ Y I +L +D A + M C P TY +I G+ R G ++ A
Sbjct: 297 GIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELA 356
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + +M G PN TY LI+ C R ++ + M+ N T ++ G
Sbjct: 357 IGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKG 416
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F D KA + + ++ P + NTL+ + A L M + P+
Sbjct: 417 LFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPD 476
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ ++ G L+ +K G+ P TY +++ K G+
Sbjct: 477 ERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFE 536
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ +++ +YN +I K N A + C +M ++ + PN +T+ +LI+G CK+
Sbjct: 537 RMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNT 596
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ ++ + + P+ T+ S+I LC+ E +D + E G P TY+
Sbjct: 597 ATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQ----EGKVDAAERLTENGCEPTIDTYS 652
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ LC G + +L + M+ +SP + + +L+ + C+ K++ A + F M
Sbjct: 653 TLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVK 712
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
G +P F Y LI AL R +EA F S+ + N D ++++ L+Q+G
Sbjct: 713 GFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEG 767
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 127/240 (52%)
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+F + ++ ++N +I+ CK + A + ++ D+ P+ T+ +LI GHC++
Sbjct: 187 QIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNR 246
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ K E+ +++ G P+ T++++I+ LC R +A+D L EM E G+ P TY
Sbjct: 247 KLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYT 306
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+ I SLC IG V ++ L + M SP + T+ A+I R K+E A + ML
Sbjct: 307 VPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKE 366
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL P+ +Y+ALI L GRF A + F ME +G ++ T N I++ L E+A
Sbjct: 367 GLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKA 426
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 173/406 (42%), Gaps = 39/406 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP+ YN +I +K ++ A M C+PD TY LI G C+ G +D A
Sbjct: 437 GPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSA 496
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+M G +PN +TYT +IDG+C ++ + E M+E + T +++ G
Sbjct: 497 TSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISG 556
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
LS + SEA KM ++G P
Sbjct: 557 -----------------------------------LSKGNRFSEAEKFCAKMTEQGLQPN 581
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T+ + L N I K+ P TY L+ L + G+ +R
Sbjct: 582 TITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAER--- 638
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ +++Y+ ++ C+ + A+++ M+++ ++P++ + +L+ HCK
Sbjct: 639 -LTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSL 697
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V E+ ++ GF+P F + +I LC R E+AL+ +++ + I +
Sbjct: 698 KVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWT 757
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
+L+ L GD ++ M++ +P ++T+ L + ++ K
Sbjct: 758 VLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGK 803
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 121/239 (50%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
S+N ++ K +M+ A + ++ + P+L+TFNT+I+ CK +V + + +
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
+ PD FT+ S+I CR + + A + MV+ G PN++TY+ LI LC G +
Sbjct: 224 FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRI 283
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
++ + ++M I P +YT+ I S C + +++ A SM G P +Y+A+
Sbjct: 284 GEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAI 343
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
I L ++G+ + A + M + G P++ T N ++ L +GRF A I + G
Sbjct: 344 ISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHG 402
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 118/246 (47%), Gaps = 4/246 (1%)
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCK-VNMMDRATEICREMRDRD---IAPNLVTFNTLIS 298
LN + KD++++ + +++ C+ + + R T+ + D L +FNTL+
Sbjct: 111 LNRLVKDKILAPADHVRILMIKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLL 170
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
K V + + + G KP TFN+MI+ LC+ + ++A+ +++ ++ + P
Sbjct: 171 QLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCP 230
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ TY LI C + ++ +F +M D +P+ T++ LI C +I +A
Sbjct: 231 DAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDML 290
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M G+ P ++Y+ I +L GR D+A SM + GC+P T I+ L +
Sbjct: 291 EEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRA 350
Query: 479 GRFEEA 484
G+ E A
Sbjct: 351 GKMELA 356
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 92/172 (53%)
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
++FN+++ L + A + +++ GV P+ +T+N +I LC G V ++ +F K
Sbjct: 163 YSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNK 222
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
+ + PD +T+ +LI CR K++KA + F M+ G P++ +YS LI L GR
Sbjct: 223 IFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGR 282
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
EA M + G P YT + + +L GR ++A ++V++ ++G S
Sbjct: 283 IGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCS 334
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 109/242 (45%), Gaps = 4/242 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+T Y ++I+ L K+ + +LA+ F +M C P+ TY LI+G+C+ G VD A
Sbjct: 577 GLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA 636
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL + G P + TY+ L+ G C R E +++E MKE+ + P+ SL+
Sbjct: 637 ERLTEN----GCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVA 692
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ L A E+ + + L+ L S A EA I + + + + +
Sbjct: 693 HCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSD 752
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ V L+ D + L R P TY++L L K G+ + D+ N
Sbjct: 753 LIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGN 812
Query: 245 HV 246
+
Sbjct: 813 RL 814
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/490 (25%), Positives = 237/490 (48%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P +N ++D+ K A ++ + +PD T NILI+ C +G +
Sbjct: 56 TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++ ++ GY P+ T LI G C +V + + + + N+ + +L++GV
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVC 175
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ D A +LL + R + +T++ L + SEA + +M +G +
Sbjct: 176 KIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 235
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L E G+L+ + + + P TY +L++AL K G+ E L +
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K + +V +Y+ ++D + V + +A + M + P++ T+ LI+G CK+ V
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMV 355
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ L + + P T++S+ID LC++ R D + EM + G P + ITY+ L
Sbjct: 356 DEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSL 415
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I LC G + R++ LF KM+ I P+I+TF L+ C+ +++ A++ F +LT G
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 475
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+ ++Y+ +I K G +EA ME NGC P+++T I+ L ++ ++A
Sbjct: 476 HLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEK 535
Query: 487 IVKTSKERGI 496
+++ RG+
Sbjct: 536 LLRQMIARGL 545
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 138/320 (43%), Gaps = 43/320 (13%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P+ YN ++DAL K + A M KPD TY+ L+ G + V +A
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQ 324
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M +G P+V+TYTILI+GFC K V E + + M ++N+ P T SL+ G+
Sbjct: 325 HVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ ++L+ +R + ++L+ L N A A+ KM D
Sbjct: 385 CKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKD------- 437
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+ ++P T+ +L++ L K GR +
Sbjct: 438 ----------------------------QEIRPNIFTFTILLDGLCKGGRLKDAQE---- 465
Query: 246 VFKDRLVS----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
VF+D L NV +YN++I+ CK +++ A + +M D PN TF T+I
Sbjct: 466 VFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALF 525
Query: 302 KDAEVHKTRELLVMLLECGF 321
K E K +LL ++ G
Sbjct: 526 KKDENDKAEKLLRQMIARGL 545
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 96/216 (44%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S +G++P Y +I+ K+ +D A F++M P TY+ LI G+C+ G
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ L+ +M G +V TY+ LIDG C + + MK++ + PN T
Sbjct: 390 IPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTI 449
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G+ + A E+ + + N ++ + EA +L KM D G
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNG 509
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
+P + TF+ + L + ++ +L I RG+
Sbjct: 510 CIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 74/175 (42%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P FN ++D + + A+ + G+ P+ IT NILI C +G + +
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
K+ PD T N LI+ C +++KA +L G + + SY+ LI + K
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G A + ++ P+ + I++ L + EA+ + +GIS
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGIS 231
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+DA+ + M+ P I +N ++ S + + ++ L +++ I PD+ T N L
Sbjct: 41 DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
I FC M +I +L G PD + + LIK L G+ +A
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKA 148
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
+I +V ++ F +M R +P I FN ++ SF +M A + G++PD
Sbjct: 36 SIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLI 95
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA---HD 486
+ + LI G+ + + G PD+ T N +++ L +G+ ++A HD
Sbjct: 96 TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHD 153
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 141/523 (26%), Positives = 242/523 (46%), Gaps = 40/523 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ---CKPDRFTYNILIHGICRIGV 60
G +P+ YN ++ N + A M+ DQ C PD +YN +I+G R G
Sbjct: 260 FGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQ 319
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD+A L QM G P+V TY +IDG C A+ V V + M ++ V P+ T
Sbjct: 320 VDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNC 379
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+HG + LL + + LL L N +EA I + +G
Sbjct: 380 LIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKG 439
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG- 239
P++ ++E I D ++G+ P Y L++AL K GR +
Sbjct: 440 IKPDAM--------------IDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAI 485
Query: 240 ---DRYLNHVF----------KDRLV---------SNVNSYNMVIDCFCKVNMMDRATEI 277
++ +N V+ + LV +V +N ++ C+ + A +
Sbjct: 486 LKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRL 545
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
M + P+++++NTL+ GHC + +LL +++ G KP++FT+N+++ C+
Sbjct: 546 IELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCK 605
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
A R +DA L EM+ G P+ +TYN ++ L G + + L+ M R D+YT
Sbjct: 606 ARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYT 665
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+N ++ C+ N +++A K F S+ + GL+ +++ +I AL+K G+ ++A F ++
Sbjct: 666 YNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATIS 725
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
G PD T LI E L+++G EE + +E G + S
Sbjct: 726 AYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNS 768
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/500 (22%), Positives = 231/500 (46%), Gaps = 34/500 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P YN VID L K+ +D A FQQM KP TYN LIHG G E
Sbjct: 334 GIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEV 393
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE-------VFR--------------VL 103
+RL+++M P+ + Y +L+D C R E V R +
Sbjct: 394 VRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIF 453
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
+ M+++ + PN +L+ + + + + +++F + + N + Y L
Sbjct: 454 DKMRQQGLSPNVVNYGALIDALCKL---GRVDDAILKFNQ--------MINEV-YGLCTV 501
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
+A ++ +M D+G + F+ + L + E +++ ++ GV+P +Y
Sbjct: 502 EKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISY 561
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
L++ GR E + L+ + L N +YN ++ +CK +D A + REM
Sbjct: 562 NTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLM 621
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
P++VT+NT++ G + + +EL + ++ + D +T+N +++ LC+ + ++
Sbjct: 622 NGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDE 681
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A + G+ + IT+NI+I +L G ++ LF + A + PD+ T+ + +
Sbjct: 682 AFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAE 741
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ + +E+ F +M G P++ +AL++ + G A +++ +
Sbjct: 742 NLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSL 801
Query: 464 DSYTSNLILETLVQQGRFEE 483
++ T+++++ +L +G +++
Sbjct: 802 EASTASMLI-SLYSRGEYQQ 820
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 183/453 (40%), Gaps = 78/453 (17%)
Query: 77 APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFE 136
AP+ TY+ILI FC R+ F V ++ + N L+ G+ +A
Sbjct: 192 APDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATN 251
Query: 137 LLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL---PESSTFDYTV 192
+L+ M T +V NTL+ N + A EA +L M D L P+ +++ +
Sbjct: 252 ILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVI 311
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+++ + I RG+ P
Sbjct: 312 NGFFREGQVDKAYNLFLQMIDRGIPP---------------------------------- 337
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+V +YN VID CK ++DRA + ++M D+ + P+ T+N LI G+ + + L
Sbjct: 338 -DVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRL 396
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHR---------------------FEDALDCLSEM 351
L + +PD F + ++D LC+ R ++A+ +M
Sbjct: 397 LEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKM 456
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ---SFCRM 408
+ G+ PN + Y LI +LC +G R+ I FN +I C +
Sbjct: 457 RQQGLSPNVVNYGALIDALCKLG---------------RVDDAILKFNQMINEVYGLCTV 501
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
K EKAE+ F ML G+R D ++ L+ L + GR EA++ M + G PD +
Sbjct: 502 EKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISY 561
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
N +++ GR +EA ++ G+ F
Sbjct: 562 NTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEF 594
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 11/167 (6%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR------LFQKMQ---ADRIS 392
DAL ++ P + +N L+ ++ +L LF +M +D+++
Sbjct: 133 HDALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVA 192
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PD T++ LI FCRM ++E F +L G R ++ ++ L+K L + R DEA
Sbjct: 193 PDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNI 252
Query: 453 FL-SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT-SKERGIS 497
L M + GC P+ + N +++ + R EEA +++ + ++G+S
Sbjct: 253 LLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLS 299
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 234/481 (48%), Gaps = 1/481 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS +N+++ L K +D A F+ M D +P+ TYNI+I +C G V+EA
Sbjct: 83 GCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD-AEPNSSTYNIIIDMLCLGGRVEEA 141
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++ +ME PN+ T I++D C A+++ E +++ E +R P+ T SL+ G
Sbjct: 142 YRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDG 201
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A+ L + ++ +V +L+ + + I +++ RG P+
Sbjct: 202 LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPD 261
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + C+ ++ + I + G P +Y +L+ L KAG+ E +
Sbjct: 262 LTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFH 321
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + +YN V+D FCK + +A EI EM+++ + P + T+ ++ G K
Sbjct: 322 AMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKID 381
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L G + + ++S+ID + R ++A L EM++ G+ PN T+N
Sbjct: 382 RLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 441
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ +L ++ +L FQ M+ + P+ YT++ LI CR+ K KA + M
Sbjct: 442 SLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQ 501
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL P+ +Y+ +I L K G +A F + NG PD+ + N ++E + R EA
Sbjct: 502 GLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 561
Query: 485 H 485
+
Sbjct: 562 Y 562
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/492 (21%), Positives = 229/492 (46%), Gaps = 1/492 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++I L K+ + A F QM ++ P + YN +I G G ++A
Sbjct: 13 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDA 72
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L++++ G P+V ++ ++ ++V E + E+MK ++ PN +T ++
Sbjct: 73 YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDM 131
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A+ +L L N ++ RL EA I RG P+
Sbjct: 132 LCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPD 191
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L ++E + + + G Y L+ + GR +G +
Sbjct: 192 CVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFK 251
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++ N +DC K +++ I ++R P++ +++ LI G K
Sbjct: 252 ELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAG 311
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +T + + + GF D +N+++D C++ + A + L EM E V P TY
Sbjct: 312 QARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYG 371
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++ L I + + LF++ ++ I ++ +++LI F ++ +I++A M+
Sbjct: 372 AIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKK 431
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL P+ +++++L+ AL+K+ +EA F SM++ C P++YT ++++ L + ++ +A
Sbjct: 432 GLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKA 491
Query: 485 HDIVKTSKERGI 496
+ +++G+
Sbjct: 492 FVFWQDMQKQGL 503
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 188/434 (43%), Gaps = 36/434 (8%)
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
++ +K + + P++ + S++ + + +A EL + + NT++
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
+ +A +L ++ +RG +P +F+ +TCL ++E + + +K+ +P
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEV-MKKDAEP 120
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
STY ++++ L GR E R L+ + L N+ + N+++D CK ++ A +I
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF----------------- 321
R P+ VT+ +LI G K +V + L +L+ G
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240
Query: 322 ------------------KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
KPD N+ +DC+ +A E ++ +G P+ +Y
Sbjct: 241 GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 300
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+ILI L G + +F M+ + D +NA++ FC+ K+ KA + M
Sbjct: 301 SILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE 360
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
++P +Y A++ L K R DEA F + G + + +++ + GR +E
Sbjct: 361 KCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDE 420
Query: 484 AHDIVKTSKERGIS 497
A+ I++ ++G++
Sbjct: 421 AYLILEEMMKKGLT 434
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 144/568 (25%), Positives = 253/568 (44%), Gaps = 90/568 (15%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKP-DRFTYNILIHGICRIGVVDE 63
G+ P +A+ID ++ ID L+ + + V P + TYN+LIHG+C+ G +++
Sbjct: 40 GLKPDYNACSALIDGFMREGDID-EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEK 98
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++K M LG PN T+ +LI+G+C + +L+ M++RN+ P+ + ++++
Sbjct: 99 AAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMIN 158
Query: 124 GV-----------------FRCLDPHKA-FELLI-------RFMEREPLTQKLVC----- 153
G+ F L P+ + LI R E L + C
Sbjct: 159 GLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAP 218
Query: 154 -----NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
N ++ LS EA+ L ++ RG P++ TF + + E
Sbjct: 219 DIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYF 278
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH----------------------- 245
D + G+ P Y +L+ +KAG +E H
Sbjct: 279 DEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKN 338
Query: 246 --------VFKD----RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
VF + LV +V +Y+ +I FCK +++A E+ EM + IAPN+ +
Sbjct: 339 GRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIY 398
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
N L+ G CK ++ + R+L + E G +PD T+++MID C++ +A EM
Sbjct: 399 NALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS 458
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
GV P++ YN L+ C GD+ +++ LF++M + + +FN LI +C+ KI++
Sbjct: 459 KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQE 517
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ--------------- 458
A + F M+ + PD+ +Y+ +I K+G+ +EA F M++
Sbjct: 518 ASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKM 577
Query: 459 --NGCNPDSYTSNLILETLVQQGRFEEA 484
G PD T L++ ++ EA
Sbjct: 578 VAKGVKPDEVTYGLVIYAHCKEDNLVEA 605
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 222/493 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+T Y + L ++ ++ A L F++M KPD + LI G R G +DE
Sbjct: 5 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 64
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LR+ M G N+ TY +LI G C ++ + +L+ M PN T L+ G
Sbjct: 65 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 124
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + +A ELL +R + + ++ L + S A +L KM G P
Sbjct: 125 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 184
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + + E +LD GV P Y ++ L KAG+ E YL
Sbjct: 185 VVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 244
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L + ++ I + K M A + EM D + PN + LI+GH K
Sbjct: 245 EIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAG 304
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + L G PD T ++ I L + R ++AL SE+ E G+ P+ TY+
Sbjct: 305 NLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYS 364
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C G+V ++ L +M I+P+I+ +NAL+ C+ I++A K F M
Sbjct: 365 SLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK 424
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL PD+ +YS +I KS EA F M G P S+ N ++ ++G E+A
Sbjct: 425 GLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKA 484
Query: 485 HDIVKTSKERGIS 497
++ + ++G +
Sbjct: 485 MNLFREMLQKGFA 497
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/513 (21%), Positives = 226/513 (44%), Gaps = 18/513 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++F G+ P+ +Y+ +I I+ A MS PD F YN +I + + G
Sbjct: 176 MTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 235
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
++EA + +++G G P+ T+ I G+ ++ E + + M + + PN
Sbjct: 236 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 295
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L++G F+ + +A + L C+ ++ L N EA + ++ ++G
Sbjct: 296 LINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 355
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P+ T+ ++ ++ + + D +G+ P Y L++ L K+G
Sbjct: 356 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 415
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + + L + +Y+ +ID +CK + A + EM + + P+ +N L+ G
Sbjct: 416 KLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGC 475
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ ++ K L +L+ GF +FN++ID C++ + ++A EM+ + P+
Sbjct: 476 CKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDH 534
Query: 361 ITYNILIRSLCAIGDVARS-----------------LRLFQKMQADRISPDIYTFNALIQ 403
+TY +I C G + + LF+KM A + PD T+ +I
Sbjct: 535 VTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIY 594
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ C+ + + +A K ++ G+ + LI AL K EA + M + G P
Sbjct: 595 AHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKP 654
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ ++ + + G+ +EA + + K G+
Sbjct: 655 SLAACSTLVRSFHEAGKMDEATRVFEGVKSLGL 687
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 200/452 (44%), Gaps = 18/452 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P + A I K+ + A F +M P+ Y +LI+G + G + EA
Sbjct: 250 GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEA 309
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + + + LG P+V T + I G RV E +V +KE+ + P+ T SL+ G
Sbjct: 310 LSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 369
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + KAFEL + + N L+ L + A + M ++G P+
Sbjct: 370 FCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPD 429
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S T+ + ++ E + +GV+P Y L+ K G D+E L
Sbjct: 430 SVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG-DMEKAMNLF 488
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + S+N +ID +CK + A+++ +EM + I P+ VT+ T+I HCK
Sbjct: 489 REMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAG 548
Query: 305 EVHKT---------RELLV--------MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
++ + R L+V ++ G KPD+ T+ +I C+ +A
Sbjct: 549 KMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL 608
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
E+V G+ +++LI +LC D+ + +L +M + P + + L++SF
Sbjct: 609 RDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHE 668
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
K+++A + F + +LGL PD + L+
Sbjct: 669 AGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 700
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 153/326 (46%), Gaps = 10/326 (3%)
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
MG++G +P + T+ L +NE + K G+KP ++ L++ + G
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG- 59
Query: 236 DVEGDRYLNHVFKDRLVS-----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
D+ D L KD +VS N+ +YN++I CK M++A EI + M PN
Sbjct: 60 DI--DEVLR--IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNS 115
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
TF LI G+C++ + + ELL + + P ++ +MI+ LC A L +
Sbjct: 116 RTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEK 175
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M G+ PN + Y+ LI + G + + RL M ++PDI+ +NA+I + K
Sbjct: 176 MTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 235
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+E+A + GL+PD ++ A I K+G+ EA + F M +G P++ +
Sbjct: 236 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 295
Query: 471 ILETLVQQGRFEEAHDIVKTSKERGI 496
++ + G EA I + G+
Sbjct: 296 LINGHFKAGNLMEALSIFRHLHALGV 321
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 134/495 (27%), Positives = 231/495 (46%), Gaps = 31/495 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ L++ +I L + ID A +F+ M ++C P+ TYN +++G+C+ +DE
Sbjct: 29 GVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG-EECSPNVITYNTVVNGLCKANRIDEG 87
Query: 65 LRLVKQME-----GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
L L ME G P+V +Y+ +ID C A+RV + + + M+ PN T
Sbjct: 88 LELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYS 147
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
SL+ G+ + +A+ LL++ + + + + N ++ SE +L M ++
Sbjct: 148 SLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEK 207
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G+ F+ + L + + C + +K G KP TY + + L KAG+ E
Sbjct: 208 GFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEA 267
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
R L + + ++ +V +Y+ +ID FCK MD+A ++ M + P+ VTF TL+ G
Sbjct: 268 YRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHG 327
Query: 300 ---HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
H K E + E +V GF P T+N ++DC+C A E AL+ +M
Sbjct: 328 FSEHKKSREAFRVHEDMV---NAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKR 384
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI----- 411
P+ TY LI+ LC V + M+AD + P+ +AL++ C+ ++
Sbjct: 385 QPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACS 444
Query: 412 --------------EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
++A + M+ G+RPD +Y A++++L R D A F M
Sbjct: 445 VLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMA 504
Query: 458 QNGCNPDSYTSNLIL 472
GC P T L++
Sbjct: 505 SRGCAPGLVTYTLLI 519
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 183/433 (42%), Gaps = 51/433 (11%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G +P+ Y+++ID L K + +D AY Q+ + P YN +++G R G E
Sbjct: 137 VGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSE 196
Query: 64 ALRLVKQMEGLGYA-----------------------------------PNVYTYTILID 88
L L+ M+ G+ PNV TY + +
Sbjct: 197 CLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVH 256
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
G C A +V E +R+L M E V P+ T S++ G + KA ++ R M E +
Sbjct: 257 GLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIP 316
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
+ TLL+ S + + EA + M + G++P T++ + C+ + I
Sbjct: 317 HPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIY 376
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
++ +P +TY L++ L +A R E +L+ + D +V N + +++ CK
Sbjct: 377 HKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQ 436
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+D A + N+V CK E + E++ ++ G +PD+ T+
Sbjct: 437 GEVDEACS---------VLDNVVEI-------CKAGEPDEAVEVIEQMVLKGVRPDEATY 480
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+++ LC R + A+ +M G P +TY +LI C+ + R+F+ M A
Sbjct: 481 VAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVA 540
Query: 389 DRISPDIYTFNAL 401
+P T L
Sbjct: 541 AGFTPQAQTMRTL 553
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 239/495 (48%), Gaps = 7/495 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS YN ++ L K +D A F++M D P+ TYNILI +CR G +D A
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDCA 396
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L M+ G PNV T I++D C ++++ E + E M + P+E T SL+ G
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDG 456
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A+++ + ++ + T +V +L+ N+ + I + M ++ P+
Sbjct: 457 LGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPD 516
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + C+ + + + + R P +Y +L+ L KAG E
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFY 576
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + V + +YN+VID FCK +++A ++ EM+ + P +VT+ ++I G A
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL---A 633
Query: 305 EVHKTRELLVMLLECGFKPDKFT---FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
++ + E ++ E K + ++S+ID + R ++A L E+++ G+ PN
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVY 693
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
T+N L+ +L ++ +L FQ M+ + +P+ T+ LI C++ K KA + M
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G++P SY+ +I L K+G EA F + NG PDS N ++E L R
Sbjct: 754 QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRA 813
Query: 482 EEAHDIVKTSKERGI 496
+A + + ++ RG+
Sbjct: 814 MDAFSLFEETRRRGL 828
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/492 (23%), Positives = 224/492 (45%), Gaps = 1/492 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++I L K+N +D A F+ + ++ P + YN +I G G DEA
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+++ G P+V Y ++ +V E RV E MK ++ PN +T L+
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMK-KDAAPNLSTYNILIDM 386
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R AFEL + N ++ RL + EA AI +M + P+
Sbjct: 387 LCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPD 446
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + L +++ I + + + Y L++ + GR +G +
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ N +DC K ++ + E++ R P+ +++ LI G K
Sbjct: 507 DMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAG 566
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++T EL + E G D +N +ID C+ + A L EM G P +TY
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I L I + + LF++ ++ RI ++ +++LI F ++ +I++A ++
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL P+ +++++L+ AL+K+ +EA F SM++ C P+ T +++ L + +F +A
Sbjct: 687 GLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 485 HDIVKTSKERGI 496
+ +++G+
Sbjct: 747 FVFWQEMQKQGM 758
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 206/445 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ R N ++D L KS +D A F+QM C PD T+ LI G+ ++G VD+A
Sbjct: 407 GLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDA 466
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ ++M N YT LI F N R + ++ + M +N P+ + + +
Sbjct: 467 YKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDC 526
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F+ +P K + R + + L++ L A+E + M ++G + +
Sbjct: 527 MFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLD 586
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ + +N+ +L+ +G +P TY +++ L K R E
Sbjct: 587 TRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE 646
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
R+ NV Y+ +ID F KV +D A I E+ + + PN+ T+N+L+ K
Sbjct: 647 EAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAE 706
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E+++ + E P++ T+ +I+ LC+ +F A EM + G+ P+TI+Y
Sbjct: 707 EINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYT 766
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I L G++A + LF + +A+ PD +NA+I+ N+ A F
Sbjct: 767 TMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRR 826
Query: 425 GLRPDNFSYSALIKALIKSGRFDEA 449
GL N + L+ L K+ ++A
Sbjct: 827 GLHIHNKTCVVLLDTLHKNDCLEQA 851
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 217/498 (43%), Gaps = 7/498 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G PS ++ + VK+N + + Q M + +P Y LI +
Sbjct: 124 MSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNH 183
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
D L L +QM+ LGY P V+ +T LI GF RV +L+ MK ++ +
Sbjct: 184 SDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNV 243
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + A++ ++ +++ L + EA + +
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P + ++ + + +E +L+ +G P Y ++ L K G+ E
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEAL 363
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
R + KD N+++YN++ID C+ +D A E+ M+ + PN+ T N ++
Sbjct: 364 RVFEEMKKD-AAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRL 422
Query: 301 CKDAEVHKTRELLVMLLECGFK---PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
CK K E + + +K PD+ TF S+ID L + R +DA +M++
Sbjct: 423 CKS---QKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCR 479
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
N+I Y LI++ G ++++ M SPD+ N + + + EK
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F + + PD SYS LI LIK+G +E + F SM++ GC D+ N++++ +
Sbjct: 540 FEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 478 QGRFEEAHDIVKTSKERG 495
G+ +A+ +++ K +G
Sbjct: 600 CGKVNKAYQLLEEMKTKG 617
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/458 (23%), Positives = 202/458 (44%), Gaps = 21/458 (4%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
+YN L+ + R D +++ +M G+ P+V T ++ A ++ E F V++ M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNM 159
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMER---EPLTQKLVCNTLLYRLSNN 163
++ P + +L+ G F ++ L + M+ EP + TL+ +
Sbjct: 160 RKFKFRPAFSAYTTLI-GAFSAVNHSDMMLTLFQQMQELGYEPTVH--LFTTLIRGFAKE 216
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK-------RGV 216
A ++L +M +SS+ D + +D G +D K G+
Sbjct: 217 GRVDSALSLLDEM-------KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
KP TY ++ L KA R E H+ K+R V +YN +I + D A
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 329
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
+ R + P+++ +N +++ K +V + + + + P+ T+N +ID LC
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDA-APNLSTYNILIDMLC 388
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
RA + + A + M + G+ PN T NI++ LC + + +F++M +PD
Sbjct: 389 RAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEI 448
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
TF +LI ++ +++ A K + ML R ++ Y++LIK GR ++ + + M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
C+PD N ++ + + G E+ + + K R
Sbjct: 509 VNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSR 546
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 180/433 (41%), Gaps = 15/433 (3%)
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL-EIMKERNVCPNEATVRSL 121
E R ++ L + P Y +L+ C F L +I+ E +V +V +
Sbjct: 83 EYFRWYERRTELPHCPESYNSLLLVMARCRN------FDALDQILGEMSVAGFGPSVNTC 136
Query: 122 VHGVFRCLDPHK---AFELL--IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
+ V C+ +K F+++ +R + P TL+ S + + + ++M
Sbjct: 137 IEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYT--TLIGAFSAVNHSDMMLTLFQQM 194
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
+ GY P F + ++ +LD + Y + +++ K G+
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV 254
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
++ + + + L + +Y +I CK N +D A E+ + P +NT+
Sbjct: 255 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 314
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
I G+ + + LL G P +N ++ CL + + ++AL EM +
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKK-DA 373
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
PN TYNILI LC G + + L MQ + P++ T N ++ C+ K+++A
Sbjct: 374 APNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
F M PD ++ +LI L K GR D+A + + M + C +S +++
Sbjct: 434 IFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFF 493
Query: 477 QQGRFEEAHDIVK 489
GR E+ H I K
Sbjct: 494 NHGRKEDGHKIYK 506
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 136/305 (44%), Gaps = 12/305 (3%)
Query: 201 LNETCGILDT----------FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+N+ C +L+T KP+ + ++ L R +E R+ +
Sbjct: 36 VNDICNVLETGAWGPSAENALSALNFKPQPEFVIGVLRRLKDVNRAIEYFRWYER--RTE 93
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
L SYN ++ + D +I EM P++ T ++ K ++ +
Sbjct: 94 LPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGF 153
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+++ + + F+P + ++I + + L +M E G P + LIR
Sbjct: 154 DVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGF 213
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
G V +L L +M++ + DI +N I SF ++ K++ A K F + GL+PD
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+Y+++I L K+ R DEA + F +E+N P +Y N ++ G+F+EA+ +++
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 491 SKERG 495
+ +G
Sbjct: 334 QRAKG 338
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ +N+++DALVK+ I+ A + FQ M +C P++ TY ILI+G+C++ ++A
Sbjct: 687 GLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++M+ G P+ +YT +I G A +AE + + K P+ A +++ G
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA---AILRKMG 177
+ AF L R C LL L N +AA A+LR+ G
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 216/427 (50%)
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
LG P + T+ L+ G C+ ++ + ++ + M + P+ T ++++G+ + +
Sbjct: 4 LGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTM 63
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A +LL + E+ + NT++ L + + +EA +M G P+ T+ +
Sbjct: 64 ALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILH 123
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
+NE + ++R V P T+ +L++ L K E + + L
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+V +YN ++D +C + MD A ++ M + APN+ ++N LI+GHCK + + + LL
Sbjct: 184 DVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLL 243
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ PD FT+++++ C+ R ++A + L EM +G+ PN ITY+I++ LC
Sbjct: 244 AEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKH 303
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G + + L + MQ +I P+I+ + LI+ C K+E A + F ++ G++P +Y
Sbjct: 304 GHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTY 363
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ +I L+K G +EA + F M NGC P+S T N+I++ ++ G A +++
Sbjct: 364 TVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVG 423
Query: 494 RGISFKS 500
+G S S
Sbjct: 424 KGFSADS 430
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 205/433 (47%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ +N ++ L I A F +M +PD TY+ +I+G+C++G
Sbjct: 4 LGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTM 63
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL+L+K+ME G PNV Y +ID C + V E M + + P+ T S++H
Sbjct: 64 ALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILH 123
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G ++A L + +ER + K+ L+ L M SEA + M ++G P
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ V + ++E + + ++G P +Y +L+ K+GR E L
Sbjct: 184 DVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLL 243
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ L ++ +Y+ ++ FC+V A E+ +EM + PNL+T++ ++ G CK
Sbjct: 244 AEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKH 303
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + ELL + E +P+ F + +I+ +C + E A + S + G+ P +TY
Sbjct: 304 GHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTY 363
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
++I L G + LF++M + P+ T+N +IQ F R A + M+
Sbjct: 364 TVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVG 423
Query: 424 LGLRPDNFSYSAL 436
G D+ ++ L
Sbjct: 424 KGFSADSSTFRML 436
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 147/277 (53%)
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
K G++P T+ L+ L + ++ + + + K +V +Y+ +I+ CK+
Sbjct: 3 KLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTT 62
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A ++ ++M ++ PN+V +NT+I CKD V + + +++ G PD FT++S++
Sbjct: 63 MALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSIL 122
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
C R +A +MVE V PN +T+ ILI LC ++ + +F+ M +
Sbjct: 123 HGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLE 182
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PD+YT+NAL+ +C +++++A+K F M G P+ SY+ LI KSGR DEAK
Sbjct: 183 PDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGL 242
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
M PD +T + ++ Q GR +EA +++K
Sbjct: 243 LAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLK 279
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 137/253 (54%), Gaps = 2/253 (0%)
Query: 246 VFKDRLVSNVNSYNMVIDCFC-KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+FK L + ++N ++ C K +MD A ++ EM P+++T++T+I+G CK
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMD-AVKLFDEMVKMGHEPDVITYSTIINGLCKMG 59
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+LL + E G KP+ +N++ID LC+ +A+D SEMV+ G+PP+ TY+
Sbjct: 60 NTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYS 119
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++ C +G V + LF++M + P+ TF LI C+ I +A F +M
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEK 179
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL PD ++Y+AL+ + DEA++ F M++ GC P+ + N+++ + GR +EA
Sbjct: 180 GLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEA 239
Query: 485 HDIVKTSKERGIS 497
++ + ++
Sbjct: 240 KGLLAEMSHKSLT 252
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 161/364 (44%), Gaps = 35/364 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN +ID+L K + A F +M + PD FTY+ ++HG C +G V+EA
Sbjct: 75 GCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEA 134
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L KQM PN T+TILIDG C + ++E + V E M E+ + P+ T +LV G
Sbjct: 135 TSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDG 194
Query: 125 ------------VFRCLD-----PH-KAFELLIRF----------------MEREPLTQK 150
+F +D P+ +++ +LI M + LT
Sbjct: 195 YCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPD 254
Query: 151 LVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ +TL+ EA +L++M G LP T+ + L L+E +L
Sbjct: 255 IFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLK 314
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+ ++P Y +L+E + G+ +++F + V +Y ++I K
Sbjct: 315 AMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGG 374
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+ + A E+ REM PN T+N +I G ++ + L+ ++ GF D TF
Sbjct: 375 LSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFR 434
Query: 330 SMID 333
+ D
Sbjct: 435 MLSD 438
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 123/281 (43%), Gaps = 9/281 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YNA++D + +D A F M C P+ +YNILI+G C+ G +DEA
Sbjct: 180 GLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEA 239
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M P+++TY+ L+ GFC R E +L+ M + PN T ++ G
Sbjct: 240 KGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDG 299
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AFELL E + + L+ + A + + +G P
Sbjct: 300 LCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPT 359
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ ++ L+ G NE C + G P TY ++++ + G R +
Sbjct: 360 VVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIE 419
Query: 245 HVFKD---------RLVSNVNSYNMVIDCFCKVNMMDRATE 276
+ R++S++ S + +I F + + DR T+
Sbjct: 420 EMVGKGFSADSSTFRMLSDLESSDEIISQFMRGSSQDRKTK 460
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 236/491 (48%), Gaps = 9/491 (1%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P +N ++D+ K +++ + +PD FT NILI+ C +G ++ A
Sbjct: 60 TPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFS 119
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++ ++ GY P+ T T LI G C +V + + + + ++ + +L++GV
Sbjct: 120 VLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVC 179
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + A +LL R R ++ NT++ L + SEA + +M +G
Sbjct: 180 KIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVV 239
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L E G L+ + + + P Y L++AL+K G+ E L +
Sbjct: 240 TYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVI 299
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K L NV +YN +ID + K + + + P++ ++N +I+ CK V
Sbjct: 300 VKTCLKPNVITYNTLIDGYAK--------HVFNAVGLMGVTPDVWSYNIMINRLCKIKRV 351
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ L + + P+ T+NS+ID LC++ R A D + EM + G N ITYN L
Sbjct: 352 EEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSL 411
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF-CRMNKIEKAEKAFFSMLTLG 425
I LC G + +++ L KM+ I PD+YT N L+ C+ +++ A+ F +L G
Sbjct: 412 INGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKG 471
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
P+ ++Y+ +I K G DEA ME +GC+P++ T +I+ L+++G ++A
Sbjct: 472 YHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAE 531
Query: 486 DIVKTSKERGI 496
++ RG+
Sbjct: 532 KLLCEMIARGL 542
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 207/461 (44%), Gaps = 52/461 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T +I L + A ++ + D+ +Y LI+G+C+IG A
Sbjct: 128 GYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAA 187
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+++++G PNV Y +ID C K V+E + M + + N T +++HG
Sbjct: 188 IQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHG 247
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
C + KL +EA L +M + P+
Sbjct: 248 F--C------------------IVGKL---------------TEALGFLNEMVLKAINPD 272
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ V L + E +L +K +KP TY L+ D Y
Sbjct: 273 VYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLI------------DGYAK 320
Query: 245 HVFKD----RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
HVF + +V SYN++I+ CK+ ++ A + +EM +++ PN VT+N+LI G
Sbjct: 321 HVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGL 380
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK + +L+ + + G + T+NS+I+ LC+ + + A+ +++M + G+ P+
Sbjct: 381 CKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDM 440
Query: 361 ITYNILIRSLCAIGDVARSLR-LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
T NIL+ L G ++ + LFQ + P++YT+N +I C+ +++A
Sbjct: 441 YTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQS 500
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
M G P+ ++ +I AL++ G D+A++ M G
Sbjct: 501 KMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARG 541
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 106/223 (47%), Gaps = 7/223 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ +G++P YN +I+ L K ++ A +++M P+ TYN LI G+C+ G
Sbjct: 326 VGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGR 385
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A L+ +M G+ NV TY LI+G C ++ + ++ MK++ + P+ T+
Sbjct: 386 ISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNI 445
Query: 121 LVHGVF----RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
L+HG+ R + F+ L +++ N ++Y + EA A+ KM
Sbjct: 446 LLHGLLCKGKRLKNAQGLFQDL---LDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKM 502
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
D G P + TF + L+ + ++ +L I RG+ R
Sbjct: 503 EDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGLLKR 545
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P FN ++D + + + + + P+ T NILI C +G + + +
Sbjct: 61 PPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSV 120
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
K+ PD T LI+ C +++KA +L G R D SY LI + K
Sbjct: 121 LSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCK 180
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G A Q ++ P+ N I++ L ++ EA ++ +GIS
Sbjct: 181 IGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGIS 235
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+DAL M+ P I +N ++ S + + L ++++ I PD +T N L
Sbjct: 45 DDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNIL 104
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
I FC + +I A +L G +PD + + LIK L G+ +A
Sbjct: 105 INCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKA 152
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 227/479 (47%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ +T YN + +L + + A+ QM + C PD +Y+ +I+G C++G +
Sbjct: 247 VGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQR 306
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L+L+++M+ G PN YTY +I C +VAE RVL M + P+ +L+
Sbjct: 307 VLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLID 366
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + + A+ L +R+ + ++ L EA + +M + P
Sbjct: 367 GFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEP 426
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ + + E + + ++ G+ P TY L + L K G + L
Sbjct: 427 DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELL 486
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + L N+ +YN +++ CK +D+A ++ ++M P+ VT+ TL+ +CK
Sbjct: 487 HEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKS 546
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E+ + ELL +L+ +P TFN +++ C + ED L M+E G+ PN TY
Sbjct: 547 REMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTY 606
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI+ C ++ + +++ M A + PD T+N LI+ C+ +++A M+
Sbjct: 607 NSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVG 666
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G SY+ALIK K +F EA++ F M + G D N+ + +G+ E
Sbjct: 667 KGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKME 725
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 204/438 (46%), Gaps = 35/438 (7%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
+YNI+ H +C++G V EA +L+ QME G P+V +Y+ +I+G+C + V +++E M
Sbjct: 255 SYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEM 314
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
+ + + PN T ++ L+C T
Sbjct: 315 QIKGLKPNPYTYNGVI---------------------------LLLCKT--------GKV 339
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
+EA +LR+M G P+ + + +++ + D KR + P F TY +
Sbjct: 340 AEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAV 399
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ L + GR +E D+ + + RL + +Y +ID +CK M A + +M +
Sbjct: 400 ICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGL 459
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN+VT+ L G CK EV ELL + G + + +T+NS+++ LC+A + A+
Sbjct: 460 TPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVK 519
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
+ +M G P+ +TY L+ + C ++ R+ L ++M + P + TFN L+ FC
Sbjct: 520 LMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFC 579
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+E EK ML G+ P+ +Y++LIK + + M G PD
Sbjct: 580 MSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGN 639
Query: 467 TSNLILETLVQQGRFEEA 484
T N++++ + +EA
Sbjct: 640 TYNILIKGHCKARNMKEA 657
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 169/363 (46%)
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A ++ + F E N + + L EA +L +M RG +P+ ++ +
Sbjct: 237 ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVIN 296
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
+L +++ +G+KP TY ++ L K G+ E +R L + + +
Sbjct: 297 GYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAP 356
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+ Y +ID FCK+ + A + EM+ R I+P+ +T+ +I G C+ V + +L
Sbjct: 357 DGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLF 416
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++ +PD+ T+ ++ID C+ + ++A ++M++ G+ PN +TY L LC
Sbjct: 417 HEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKC 476
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G+V + L +M + +IYT+N+L+ C+ I++A K M G PD +Y
Sbjct: 477 GEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTY 536
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ L+ A KS A + M P T N+++ G E+ ++K E
Sbjct: 537 TTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLE 596
Query: 494 RGI 496
+GI
Sbjct: 597 KGI 599
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 163/327 (49%), Gaps = 7/327 (2%)
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+ + + FD LV L+E + D + G+ + L + L D++
Sbjct: 176 KDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHL---SEDLD 232
Query: 239 GDRYLNHVFKD----RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
G + VF + + N SYN++ C++ + A ++ +M R P++++++
Sbjct: 233 GIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYS 292
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
T+I+G+C+ E+ + +L+ + G KP+ +T+N +I LC+ + +A L EM+
Sbjct: 293 TVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISE 352
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G+ P+ + Y LI C +G+V+ + RLF +MQ +ISPD T+ A+I C+ ++ +A
Sbjct: 353 GIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEA 412
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
+K F M+ L PD +Y+ALI K G+ EA M Q G P+ T + +
Sbjct: 413 DKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADG 472
Query: 475 LVQQGRFEEAHDIVKTSKERGISFKSF 501
L + G + A++++ +G+ +
Sbjct: 473 LCKCGEVDTANELLHEMCRKGLELNIY 499
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 163/337 (48%), Gaps = 1/337 (0%)
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLD-LNETCGILDTFIKRGVKP 218
L M EA + KM + G L + + ++ L LD + + F + GV
Sbjct: 192 LVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCW 251
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
++Y ++ +L + GR VE + L + + +V SY+ VI+ +C+V + R ++
Sbjct: 252 NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLI 311
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
EM+ + + PN T+N +I CK +V + +L ++ G PD + ++ID C+
Sbjct: 312 EEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 371
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
A EM + + P+ ITY +I LC G V + +LF +M R+ PD T+
Sbjct: 372 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 431
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
ALI +C+ K+++A ML +GL P+ +Y+AL L K G D A + M +
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 491
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G + YT N ++ L + G ++A ++K + G
Sbjct: 492 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG 528
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/498 (21%), Positives = 216/498 (43%), Gaps = 58/498 (11%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQM-------SVDQCKPDRFTYNILIHGICR-IGVVD 62
R+++ LV++ +D A F +M SVD C N+ I + + +
Sbjct: 183 RVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSC-------NLFISHLSEDLDGIK 235
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
AL++ + +G N +Y I+ C RV E ++L M+ R P+ + +++
Sbjct: 236 IALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVI 295
Query: 123 HGVFRCLDPHKAFELL----IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
+G + + + +L+ I+ ++ P T N ++ L +EA +LR+M
Sbjct: 296 NGYCQVGELQRVLKLIEEMQIKGLKPNPYTY----NGVILLLCKTGKVAEAERVLREMIS 351
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P+ + + +++ + D KR + P F TY ++ L + GR +E
Sbjct: 352 EGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVME 411
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
D+ + EM + + P+ VT+ LI
Sbjct: 412 ADKLFH-----------------------------------EMVCKRLEPDEVTYTALID 436
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G+CK+ ++ + L +L+ G P+ T+ ++ D LC+ + A + L EM G+
Sbjct: 437 GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL 496
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N TYN L+ LC G++ ++++L + M+ PD T+ L+ ++C+ ++ +A +
Sbjct: 497 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 556
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
ML L+P +++ L+ SG ++ ++ M + G P++ T N +++ +
Sbjct: 557 RQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIR 616
Query: 479 GRFEEAHDIVKTSKERGI 496
+I + +G+
Sbjct: 617 NNMRATTEIYRGMCAKGV 634
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 158/384 (41%), Gaps = 35/384 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P +Y +ID K ++ AY F +M + PD TY +I G+C+ G V EA
Sbjct: 353 GIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEA 412
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L +M P+ TYT LIDG+C ++ E F + M + + PN T +L G
Sbjct: 413 DKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADG 472
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +C + A ELL + N+L+ L +A +++ M G+ P+
Sbjct: 473 LCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPD 532
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T+ + ++ +L + R ++P T+ +LM +G +G++ L
Sbjct: 533 AVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLK 592
Query: 245 HVFKDRLVSNV-----------------------------------NSYNMVIDCFCKVN 269
+ + ++ N N+YN++I CK
Sbjct: 593 WMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKAR 652
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
M A + R+M + + ++N LI G K + + REL + G D+ +N
Sbjct: 653 NMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYN 712
Query: 330 SMIDCLCRAHRFEDALDCLSEMVE 353
D + E L+ E +E
Sbjct: 713 IFADINYDEGKMELTLELCDEAIE 736
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 142/294 (48%), Gaps = 4/294 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G++P+ Y A+ D L K +D A +M + + +TYN L++G+C+ G +D+
Sbjct: 457 MGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQ 516
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A++L+K ME G+ P+ TYT L+D +C ++ + +L M +R + P T L++
Sbjct: 517 AVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMN 576
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL--YRLSNNSMASEAAAILRKMGDRGY 181
G +LL +E+ + N+L+ Y + NN A+ I R M +G
Sbjct: 577 GFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRAT--TEIYRGMCAKGV 634
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P+ +T++ + ++ E + + +G S+Y L++ YK + +E
Sbjct: 635 VPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARE 694
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
+ ++ LV++ YN+ D M+ E+C E ++ + ++ T NT
Sbjct: 695 LFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 748
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 136/508 (26%), Positives = 239/508 (47%), Gaps = 22/508 (4%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM- 71
Y+ +I L + I A F M C+PD Y L+ G+C+ G ++ AL+L ++M
Sbjct: 229 YSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEML 288
Query: 72 -----EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
G+ P + +Y+I+IDG C +R E + + MK + + P+ + +L+HG
Sbjct: 289 NDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFC 348
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
KA L ++ + L+ L EA +L + RG +P+
Sbjct: 349 LSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVV 408
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T V L +++ + K G P T LM+ L ++G ++
Sbjct: 409 TCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 468
Query: 247 FKDRLVSNVN------SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
D +N SY+++ID CK D A E+ +EM+ + P+++++ +LI G
Sbjct: 469 LSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGF 528
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ + + L +++ G +PD TF+ +ID LC+ + +A + L M++ G PNT
Sbjct: 529 CRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNT 588
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TY L++ LC ++ + +LF KMQ PD+ T+ L++ C+ I+ A +
Sbjct: 589 VTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKK 648
Query: 421 MLT------LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD--SYTSNLIL 472
ML+ +PD SYS +I L K GR DEA++ F M+ G P+ SYTS ++
Sbjct: 649 MLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTS--LI 706
Query: 473 ETLVQQGRFEEAHDIVKTSKERGISFKS 500
+ G+ E+A + ++G+ +
Sbjct: 707 HGFCRSGKLEDAKHLFNEMVDQGVQLNA 734
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 230/483 (47%), Gaps = 35/483 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y+ +ID L K D A F++M PD +Y LIHG C G ++A L
Sbjct: 300 PTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCL 359
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+M +G P+V T ++LID C +V E ++LE++ +R P+ T +LV G+
Sbjct: 360 FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCM 419
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
KA +L ++ + + + C TL+ L + A + + M S T
Sbjct: 420 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM-------LSDT 472
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
Y + C KP +Y ++++ L K GR+ E +
Sbjct: 473 SPYGINC----------------------KPNAISYSIIIDGLCKCGREDEARELFKEMK 510
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
++ +V SY +I FC+ A + EM D + P++ TF+ LI CK+ +V
Sbjct: 511 ALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVI 570
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ ELL ++++ G P+ T+ +++ LC R +A +M + G P+ +TY L+
Sbjct: 571 EANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLM 630
Query: 368 RSLCAIGDVARSLRLFQKMQAD------RISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
+ LC G++ +L L +KM +D PD+ +++ +I C+ + ++A + F M
Sbjct: 631 KGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEM 690
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
LG+ P+ SY++LI +SG+ ++AK F M G ++ T ++++ ++G+
Sbjct: 691 KALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQI 750
Query: 482 EEA 484
++A
Sbjct: 751 DKA 753
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 136/512 (26%), Positives = 249/512 (48%), Gaps = 22/512 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD------QCKPDRFTYNILIHGICR 57
LG P Y ++ L ++ I++A Q+M D +CKP +Y+I+I G+C+
Sbjct: 74 LGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCK 133
Query: 58 IGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
DEA L K+M+ G P+V +YT LI GFC + + + + M + + + T
Sbjct: 134 DRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTT 193
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
L+ + + +A ELL ++R + + +TL+ L SEA + M
Sbjct: 194 SSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQ 253
Query: 178 DRGYLPESSTFDYTVTCLV------TGLDLNETCGILDTFIKRGV--KPRFSTYLLLMEA 229
G P++ + + L T L L++ +L+ + G+ KP +Y ++++
Sbjct: 254 KLGCRPDAIAYGTLMKGLCQTGNINTALQLHQE--MLNDTGRYGIKCKPTLISYSIIIDG 311
Query: 230 LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
L K R+ E + ++ +V SY +I FC ++A + EM D I P+
Sbjct: 312 LCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPD 371
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+ T + LI CK +V + +LL ++++ G PD T +++ LC HR A
Sbjct: 372 VTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFL 431
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD------RISPDIYTFNALIQ 403
+M + G PN +T L++ LC G++ +L L + M +D P+ +++ +I
Sbjct: 432 KMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIID 491
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
C+ + ++A + F M LG+ PD SY++LI +SG++ +AK F M G P
Sbjct: 492 GLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQP 551
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
D T +++++ L ++G+ EA+++++ +RG
Sbjct: 552 DVTTFSVLIDMLCKEGKVIEANELLEVMIQRG 583
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 198/422 (46%), Gaps = 12/422 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P Y +I S + A F +M +PD T ++LI +C+ G V EA
Sbjct: 332 GIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEA 391
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L++ + G P+V T T L+ G C R+++ ++ M++ PN T +L+ G
Sbjct: 392 NKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKG 451
Query: 125 VFRCLDPHKAFELLIRFM-EREPLTQKLVCNTLLYRLSNNSMAS-----EAAAILRKMGD 178
+ + + A EL + + P N + Y + + + EA + ++M
Sbjct: 452 LCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKA 511
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G +P+ ++ + + + + + GV+P +T+ +L++ L K G+ +E
Sbjct: 512 LGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIE 571
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ L + + + N +Y ++ C + + AT++ +M+ P++VT+ TL+
Sbjct: 572 ANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMK 631
Query: 299 GHCKDAEVHKTREL-LVMLLECG-----FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
G C+ + EL ML + G FKPD +++ +ID LC+ R ++A + EM
Sbjct: 632 GLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMK 691
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
GV PN I+Y LI C G + + LF +M + + T++ +I FC+ +I+
Sbjct: 692 ALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQID 751
Query: 413 KA 414
KA
Sbjct: 752 KA 753
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 179/398 (44%), Gaps = 14/398 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI P + +ID L K + A + + C PD T L+ G+C + +
Sbjct: 366 VGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISK 425
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER------NVCPNEAT 117
A +L +M+ LG PNV T L+ G C + + + + M N PN +
Sbjct: 426 ATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAIS 485
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
++ G+ +C +A EL + + +L++ + +A + +M
Sbjct: 486 YSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV 545
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
D G P+ +TF + L + E +L+ I+RG P TY L++ L R
Sbjct: 546 DIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRIS 605
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD------RDIAPNLV 291
E + + K + +V +Y ++ C+ + A E+ ++M + P+++
Sbjct: 606 EATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVI 665
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
+++ +I G CK + REL + G P+ ++ S+I CR+ + EDA +EM
Sbjct: 666 SYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEM 725
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
V+ GV N +TY+++I C G + ++ LFQKM+A+
Sbjct: 726 VDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEAN 761
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 144/302 (47%), Gaps = 12/302 (3%)
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+L+ ++RG TY L++ L R E + + K + +Y ++ C
Sbjct: 32 LLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLC 91
Query: 267 KVNMMDRATEICREMRDR------DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
+ ++ A + +EM + P LV+++ +I G CKD + REL + G
Sbjct: 92 QTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQG 151
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
PD ++ S+I CR+ ++E A +EM++ G+ + T ++LI LC G V +
Sbjct: 152 MMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEAN 211
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
L + M DI T++ LI+ C ++I +A + F SM LG RPD +Y L+K L
Sbjct: 212 ELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGL 271
Query: 441 IKSGRFDEAKQTFLSMEQN------GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
++G + A Q M + C P + ++I++ L + R +EA ++ K K +
Sbjct: 272 CQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQ 331
Query: 495 GI 496
GI
Sbjct: 332 GI 333
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 41/221 (18%)
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
+L G +PD T +ID C+ + +A + L MV+ G + +TY+ LI+ LC
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI------------------------ 411
++ + +LF M+ PD + L++ C+ KI
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 412 -----------------EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
++A + F M G+ PD SY++LI +SG++++AK F
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
M G D TS+++++ L ++G+ EA+++++ +RG
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRG 221
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 234/481 (48%), Gaps = 1/481 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS +N+++ L K +D A F+ M D +P+ TYNI+I +C G V+EA
Sbjct: 215 GCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD-AEPNSSTYNIIIDMLCLGGRVEEA 273
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++ +ME PN+ T I++D C A+++ E +++ E +R P+ T SL+ G
Sbjct: 274 YRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDG 333
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A+ L + ++ +V +L+ + + + +++ RG P+
Sbjct: 334 LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPD 393
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + C+ ++ + I + G P +Y +L+ L KAG+ E +
Sbjct: 394 LTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFH 453
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + +YN V+D FCK + +A EI EM+++ + P + T+ ++ G K
Sbjct: 454 AMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKID 513
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L G + + ++S+ID + R ++A L EM++ G+ PN T+N
Sbjct: 514 RLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 573
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ +L ++ +L FQ M+ + P+ YT++ LI CR+ K KA + M
Sbjct: 574 SLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQ 633
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL P+ +Y+ +I L K G +A F + NG PD+ + N ++E + R EA
Sbjct: 634 GLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 693
Query: 485 H 485
+
Sbjct: 694 Y 694
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/529 (23%), Positives = 236/529 (44%), Gaps = 42/529 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P LYN ID K+ ++D+A F ++ KPD +Y +I +C+ G + EA
Sbjct: 111 LEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAE 170
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L QME P Y Y +I G+ +A R + +++LE ++ER P+ + S +
Sbjct: 171 ELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNS----I 226
Query: 126 FRCLDPHKAFE---LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
CL + + L M+++ N ++ L EA IL +M
Sbjct: 227 LTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLF 286
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG-------- 234
P T + V L L E I ++ +RG P TY L++ L K G
Sbjct: 287 PNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRL 346
Query: 235 ---------------------------RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
R +G + + + ++ N +DC K
Sbjct: 347 FEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFK 406
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+++ I ++R P++ +++ LI G K + +T + + + GF D
Sbjct: 407 AGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARA 466
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+N+++D C++ + A + L EM E V P TY ++ L I + + LF++ +
Sbjct: 467 YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 526
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ I ++ +++LI F ++ +I++A M+ GL P+ +++++L+ AL+K+ +
Sbjct: 527 SKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEIN 586
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
EA F SM++ C P++YT ++++ L + ++ +A + +++G+
Sbjct: 587 EALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGL 635
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/529 (22%), Positives = 229/529 (43%), Gaps = 36/529 (6%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L P+ Y +I AL ++ + A +QM + + L+ + R G V +
Sbjct: 39 LKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVAD 98
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL LV +++G P++ Y + ID F A V + +K + + P++ + S++
Sbjct: 99 ALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIW 158
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +A EL + + NT++ + +A +L ++ +RG +P
Sbjct: 159 VLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIP 218
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+F+ +TCL ++E + + +K+ +P STY ++++ L GR E R L
Sbjct: 219 SVVSFNSILTCLGKKRKVDEALSLFEV-MKKDAEPNSSTYNIIIDMLCLGGRVEEAYRIL 277
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + L N+ + N+++D CK ++ A +I R P+ VT+ +LI G K
Sbjct: 278 DEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKK 337
Query: 304 AEVHKTRELLVMLLECGF-----------------------------------KPDKFTF 328
+V + L +L+ G KPD
Sbjct: 338 GQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLL 397
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N+ +DC+ +A E ++ +G P+ +Y+ILI L G + +F M+
Sbjct: 398 NTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQ 457
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ D +NA++ FC+ K+ KA + M ++P +Y A++ L K R DE
Sbjct: 458 QGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDE 517
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
A F + G + + +++ + GR +EA+ I++ ++G++
Sbjct: 518 AYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 566
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 112/515 (21%), Positives = 224/515 (43%), Gaps = 36/515 (6%)
Query: 19 ALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAP 78
ALV++ +D A L M + +P Y +LI + + AL L++QM+ +GY
Sbjct: 19 ALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEV 78
Query: 79 NVYTYTILIDGFCNAKRVAEVFRVLEIMKER---------NVC----------------- 112
V+ +T L+ +VA+ +++ +K NVC
Sbjct: 79 GVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFF 138
Query: 113 ---------PNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
P++ + S++ + + +A EL + + NT++ +
Sbjct: 139 HELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSA 198
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
+A +L ++ +RG +P +F+ +TCL ++E + + +K+ +P STY
Sbjct: 199 GRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEV-MKKDAEPNSSTY 257
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
++++ L GR E R L+ + L N+ + N+++D CK ++ A +I
Sbjct: 258 NIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQ 317
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
R P+ VT+ +LI G K +V + L +L+ G + + S+I R ED
Sbjct: 318 RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKED 377
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
E++ G P+ N + + G+V + +F+ +++ PD+ +++ LI
Sbjct: 378 GHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIH 437
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ + + F +M G D +Y+A++ KSG+ +A + M++ P
Sbjct: 438 GLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQP 497
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
T I++ L + R +EA+ + + +K +GI
Sbjct: 498 TVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIEL 532
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 189/425 (44%), Gaps = 1/425 (0%)
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M LGY L A+R+ + + +M+ P + L+ +
Sbjct: 1 MAVLGYGLPNQACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARR 60
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
P +A ELL + E + TL+ L+ ++A A++ ++ P+ ++
Sbjct: 61 PERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNV 120
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ C +++ C +G+KP +Y ++ L KAGR E + + +R
Sbjct: 121 CIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAER 180
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
V +YN +I + + A ++ +R+R P++V+FN++++ K +V +
Sbjct: 181 SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 240
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
L ++ + +P+ T+N +ID LC R E+A L EM + PN +T NI++ L
Sbjct: 241 SLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRL 299
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C + + ++F+ +PD T+ +LI + ++++A + F ML G +
Sbjct: 300 CKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP 359
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
Y++LI+ GR ++ + F + + GC PD N ++ + + G E+ I +
Sbjct: 360 VVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFED 419
Query: 491 SKERG 495
+ G
Sbjct: 420 IRSYG 424
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 5/185 (2%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
F+P + +I L A R E AL+ L +M E G + L+R+L G VA +L
Sbjct: 41 FRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADAL 100
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
L +++ + PDI +N I F + ++ A K F + GL+PD+ SY+++I L
Sbjct: 101 ALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVL 160
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG----- 495
K+GR EA++ F ME P +Y N ++ GRFE+A+ +++ +ERG
Sbjct: 161 CKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSV 220
Query: 496 ISFKS 500
+SF S
Sbjct: 221 VSFNS 225
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 133/477 (27%), Positives = 227/477 (47%), Gaps = 58/477 (12%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P YN ++D L++ N + LA + +M C P+ T++ILI G+C+ G V +AL
Sbjct: 158 TPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALH 217
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L +M G P+ +TY ++I G C +KRV + +R+ + MK+ V P+ T +L++G
Sbjct: 218 LFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNG-- 275
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
F +L R EA ++LR GY+ +
Sbjct: 276 --------FCMLDR-------------------------VDEAFSLLRLFEKDGYVLDVR 302
Query: 187 TFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+ +CL+ GL + + I+ VKP Y ++M+ L +AG+ +
Sbjct: 303 GY----SCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALEL 358
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
LN + + +V + YN++I FC + ++ A + E+ D PN+ T++ LISG C+
Sbjct: 359 LNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCR 418
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP---- 358
+ +E+ + + G P TFNS+ID LC+ + E A +M E G P
Sbjct: 419 NGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKM-EIGRNPSLFL 477
Query: 359 ----------NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
++ + ++ LC G + ++ R+ ++ +P IYT+N L+ FC++
Sbjct: 478 RLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKL 537
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
A K F M GL PD +Y LI L++ R ++A + F ME+NGC PD+
Sbjct: 538 GNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDA 594
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 194/466 (41%), Gaps = 50/466 (10%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ ++ +ID L KS ++ A F +M+ PD FTY ++I G+CR VD+A RL
Sbjct: 194 PNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRL 253
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+M+ G P+ T L++GFC RV E F +L + ++ + L+ G+FR
Sbjct: 254 FDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFR 313
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
K +E + + RKM + P+
Sbjct: 314 A----KRYE-------------------------------DVQLLYRKMIEDNVKPDVYL 338
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + L + + +L+ + GV P Y +L++ G E +
Sbjct: 339 YTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEIS 398
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ NV +Y+++I C+ + A EI EM P+ VTFN+LI G CK ++
Sbjct: 399 RHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLE 458
Query: 308 KTRELLVMLLECGFKP--------------DKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
K LL +E G P D + M++ LC + A L ++ +
Sbjct: 459 KA-HLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLAD 517
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
G P TYNIL+ C +G+ + +LF++MQ +SPD T+ LI R + E
Sbjct: 518 SGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREED 577
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
A K F M G PD Y ++ + + A +L +N
Sbjct: 578 AYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRN 623
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 123/507 (24%), Positives = 217/507 (42%), Gaps = 20/507 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P Y VI L +S +D AY F +M PD T N L++G C + VDEA
Sbjct: 226 GILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEA 285
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ E GY +V Y+ LI G AKR +V + M E NV P+ ++ G
Sbjct: 286 FSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKG 345
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A ELL E + + N L+ + + SEA ++ ++ P
Sbjct: 346 LAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPN 405
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR--------- 235
T+ ++ + + I + K G P T+ L++ L K G+
Sbjct: 406 VKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFY 465
Query: 236 DVEGDR----YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
+E R +L V + S +++ C ++ +A I ++ D AP +
Sbjct: 466 KMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIY 525
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
T+N L++G CK + +L + G PD T+ ++I+ L R R EDA +M
Sbjct: 526 TYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQM 585
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
+ G P+ Y ++ +C ++ R+ L+ K + S + A+ F +
Sbjct: 586 EKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAIKAIEGYFEK---- 641
Query: 412 EKAEKAFFSMLTLGLRPDNFS---YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
++ EKA +L + + ++F Y+ + L ++ R EA + FL +E+
Sbjct: 642 QEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLILEEYKVVITPPCC 701
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERG 495
++ L+++G + A D+ + E+G
Sbjct: 702 VKLIYFLLKEGDLDRAIDVFLYTIEKG 728
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/497 (22%), Positives = 197/497 (39%), Gaps = 48/497 (9%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
+ + D L+ N ++L + + K + +LI ++G+ D+A+ M
Sbjct: 95 DLITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRD 154
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
P+VYTY +++D + V M + N PN AT L+ G
Sbjct: 155 FDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDG--------- 205
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
L + +A + +M RG LP++ T+ ++
Sbjct: 206 --------------------------LCKSGNVKDALHLFDEMTQRGILPDAFTYCVVIS 239
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
L +++ + D GV P F T L+ R E L KD V
Sbjct: 240 GLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVL 299
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+V Y+ +I + + + R+M + ++ P++ + ++ G + +V ELL
Sbjct: 300 DVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELL 359
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ E G PD +N +I C +A E+ PN TY+ILI +C
Sbjct: 360 NEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRN 419
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM---------LTL 424
G + +F +M+ P TFN+LI C+ ++EKA F+ M L L
Sbjct: 420 GLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRL 479
Query: 425 GLRP----DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
P D+ S +++ L SG +A + + + +G P YT N+++ + G
Sbjct: 480 SQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGN 539
Query: 481 FEEAHDIVKTSKERGIS 497
F A+ + + + +G+S
Sbjct: 540 FNGAYKLFREMQFKGLS 556
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 122/279 (43%), Gaps = 43/279 (15%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
S +++ D N ++ + +++ I + F LI + K K E +
Sbjct: 93 SCDLITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSM 152
Query: 317 LECGFKPDKFTFNS-----------------------------------MIDCLCRAHRF 341
+ PD +T+N +ID LC++
Sbjct: 153 RDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNV 212
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+DAL EM + G+ P+ TY ++I LC V + RLF KM+ + PD T NAL
Sbjct: 213 KDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNAL 272
Query: 402 IQSFCRMNKIEKAEKAFFSMLTL----GLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+ FC ++++++A FS+L L G D YS LI+ L ++ R+++ + + M
Sbjct: 273 LNGFCMLDRVDEA----FSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMI 328
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++ PD Y ++++ L + G+ +A +++ E G+
Sbjct: 329 EDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGV 367
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 96/232 (41%), Gaps = 37/232 (15%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F G+SP T Y +I+ L++ + AY F QM + C PD Y ++ +CR
Sbjct: 550 MQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRME 609
Query: 61 VDEALRL---------------VKQMEG----------------LGYAPNVY---TYTIL 86
+ A L +K +EG + + N + Y I
Sbjct: 610 LPRAFSLWLKYLRNIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIW 669
Query: 87 IDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREP 146
+ G C +RV E ++ I++E V L++ + + D +A ++ + +E+
Sbjct: 670 LIGLCQTRRVGEALKIFLILEEYKVVITPPCCVKLIYFLLKEGDLDRAIDVFLYTIEKGY 729
Query: 147 LTQKLVCNTLLYRL--SNNSMASEAAA-ILRKMGDRGYLPESSTFDYTVTCL 195
L ++ V N +L +L M + A +L +M GY ++ +T + L
Sbjct: 730 LLRRRVANRILTKLVRRKGEMGKDRAIYLLCRMKSVGYDLDAHLLPWTKSLL 781
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 231/474 (48%)
Query: 24 NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTY 83
N++D A F +M P F + L+ I ++ L L K+M+ G P+VYT
Sbjct: 35 NTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTL 94
Query: 84 TILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME 143
TI+I+ FC+ RV VL + + P+ AT +LV G+ +A ++ + +
Sbjct: 95 TIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVG 154
Query: 144 REPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
+ TL+ L + +EA + +M +G P+ T++ + L +
Sbjct: 155 EGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKH 214
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
+L+ +K + P + ++++AL K G+ E ++ + + + +V +Y ++D
Sbjct: 215 VTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMD 274
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
C + MD A ++ M N+V++NTLI+G+CK + K L + P
Sbjct: 275 GHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIP 334
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
+ T++++I LC R +DA+ +EMV G PN +TY+IL+ LC +A ++ L
Sbjct: 335 NTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALL 394
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+ ++ + PD+ +N I CR +E A F ++ GL+PD ++++ +I+ L K
Sbjct: 395 KAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKR 454
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G DEA + F M++NGC + T N I + L+Q + A +++ RG S
Sbjct: 455 GLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFS 508
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 219/484 (45%), Gaps = 35/484 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P VI++ N +D A ++ +PD T+ L+ G+C +G + EA
Sbjct: 86 GIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEA 145
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + +M G G+ PNV TY L++G C +++ E + M + + P+ T SL+H
Sbjct: 146 LDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHA 205
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ CN ++ +L +M +P
Sbjct: 206 L---------------------------CNLCEWK--------HVTTLLNEMVKSKIMPN 230
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + V L + E ++D I+ GV+P TY LM+ E + +
Sbjct: 231 VVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFD 290
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ V NV SYN +I+ +CK+ +D+A + EM +++ PN +T++TLI G C
Sbjct: 291 MMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVG 350
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ L ++ CG P+ T++ ++D LC+ HR +A+ L + + P+ YN
Sbjct: 351 RLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYN 410
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I I +C GD+ + LF + + PD++T N +I+ C+ +++A K F M
Sbjct: 411 IAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDEN 470
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G + +Y+ + + L+++ + A Q M G + D T+ L+++ L G +
Sbjct: 471 GCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSV 530
Query: 485 HDIV 488
I+
Sbjct: 531 KQIL 534
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 184/448 (41%), Gaps = 35/448 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P T + ++ L I A F +M + +P+ TY L++G+C+ + E
Sbjct: 120 LGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTE 179
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L +M G +P+++TY LI CN V +L M + + PN ++
Sbjct: 180 ALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSL----- 234
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
N ++ L +EA ++ M G P
Sbjct: 235 ------------------------------NIVVDALCKEGKVTEAHDVVDMMIQGGVEP 264
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ + +++E + D ++ G +Y L+ K R +
Sbjct: 265 DVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLF 324
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + L+ N +Y+ +I C V + A + EM PNLVT++ L+ CK+
Sbjct: 325 EEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKN 384
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + LL + PD +N ID +CRA E A D S + G+ P+ T+
Sbjct: 385 HRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTH 444
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI+IR LC G + + +LF++M + + T+N + Q + NK +A + ML
Sbjct: 445 NIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLA 504
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQ 451
G D + + L+K L G KQ
Sbjct: 505 RGFSADVSTTALLVKMLSDDGLDQSVKQ 532
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 239/495 (48%), Gaps = 7/495 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS YN ++ L K +D A F++M D P+ TYNILI +CR G +D A
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTA 396
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L M+ G PNV T I++D C ++++ E + E M + P+E T SL+ G
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A+++ + ++ + T +V +L+ N+ + I + M ++ P+
Sbjct: 457 LGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + C+ + + + + R P +Y +L+ L KAG E
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + V + +YN+VID FCK +++A ++ EM+ + P +VT+ ++I G A
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL---A 633
Query: 305 EVHKTRELLVMLLECGFKPDKFT---FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
++ + E ++ E K + ++S+ID + R ++A L E+++ G+ PN
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
T+N L+ +L ++ +L FQ M+ + +P+ T+ LI C++ K KA + M
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G++P SY+ +I L K+G EA F + NG PDS N ++E L R
Sbjct: 754 QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRA 813
Query: 482 EEAHDIVKTSKERGI 496
+A + + ++ RG+
Sbjct: 814 MDAFSLFEETRRRGL 828
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 224/492 (45%), Gaps = 1/492 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++I L K+N +D A F+ + ++ P + YN +I G G DEA
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+++ G P+V Y ++ +V E +V E MK ++ PN +T L+
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDM 386
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R AFEL + N ++ RL + EA A+ +M + P+
Sbjct: 387 LCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPD 446
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + L +++ + + + + Y L++ + GR +G +
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ N +DC K ++ + E++ R P+ +++ LI G K
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++T EL + E G D +N +ID C+ + A L EM G P +TY
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I L I + + LF++ ++ RI ++ +++LI F ++ +I++A ++
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL P+ +++++L+ AL+K+ +EA F SM++ C P+ T +++ L + +F +A
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 485 HDIVKTSKERGI 496
+ +++G+
Sbjct: 747 FVFWQEMQKQGM 758
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 206/445 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ R N ++D L KS +D A F++M C PD T+ LI G+ ++G VD+A
Sbjct: 407 GLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDA 466
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ ++M N YT LI F N R + ++ + M +N P+ + + +
Sbjct: 467 YKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDC 526
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F+ +P K + R + + L++ L A+E + M ++G + +
Sbjct: 527 MFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLD 586
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ + +N+ +L+ +G +P TY +++ L K R E
Sbjct: 587 TRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE 646
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
R+ NV Y+ +ID F KV +D A I E+ + + PNL T+N+L+ K
Sbjct: 647 EAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAE 706
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E+++ + E P++ T+ +I+ LC+ +F A EM + G+ P+TI+Y
Sbjct: 707 EINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYT 766
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I L G++A + LF + +A+ PD +NA+I+ N+ A F
Sbjct: 767 TMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRR 826
Query: 425 GLRPDNFSYSALIKALIKSGRFDEA 449
GL N + L+ L K+ ++A
Sbjct: 827 GLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 215/498 (43%), Gaps = 7/498 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G PS ++ VK+N + Y Q M + +P Y LI +
Sbjct: 124 MSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNH 183
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
D L L +QM+ LGY P V+ +T LI GF RV +L+ MK ++ +
Sbjct: 184 SDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNV 243
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + A++ ++ +++ L + EA + +
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P + ++ + + +E +L+ +G P Y ++ L K G+ E
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEAL 363
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + KD N+++YN++ID C+ +D A E+ M+ + PN+ T N ++
Sbjct: 364 KVFEEMKKD-AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRL 422
Query: 301 CKDAEVHKTRELLVMLLECGFK---PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
CK K E M E +K PD+ TF S+ID L + R +DA +M++
Sbjct: 423 CKS---QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
N+I Y LI++ G ++++ M SPD+ N + + + EK
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F + PD SYS LI LIK+G +E + F SM++ GC D+ N++++ +
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 478 QGRFEEAHDIVKTSKERG 495
G+ +A+ +++ K +G
Sbjct: 600 CGKVNKAYQLLEEMKTKG 617
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/458 (23%), Positives = 205/458 (44%), Gaps = 21/458 (4%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
+YN L+ + R D +++ +M G+ P+V T ++ G A ++ E + V+++M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMER---EPLTQKLVCNTLLYRLSNN 163
++ P + +L+ G F ++ L + M+ EP + TL+ +
Sbjct: 160 RKFKFRPAFSAYTTLI-GAFSAVNHSDMMLTLFQQMQELGYEPTVH--LFTTLIRGFAKE 216
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK-------RGV 216
A ++L +M +SS+ D + +D G +D K G+
Sbjct: 217 GRVDSALSLLDEM-------KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
KP TY ++ L KA R E H+ K+R V +YN +I + D A
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 329
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
+ R + P+++ +N +++ K +V + ++ + + P+ T+N +ID LC
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLC 388
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
RA + + A + M + G+ PN T NI++ LC + + +F++M +PD
Sbjct: 389 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
TF +LI ++ +++ A K + ML R ++ Y++LIK GR ++ + + M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
C+PD N ++ + + G E+ + + K R
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR 546
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 138/305 (45%), Gaps = 12/305 (3%)
Query: 201 LNETCGILDT----------FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+N+ C +L+T KP+ + ++ L R +E R+ +
Sbjct: 36 VNDICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYER--RTE 93
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
L SYN ++ + D +I EM P++ T ++ G K ++ +
Sbjct: 94 LPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGY 153
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+++ M+ + F+P + ++I + + L +M E G P + LIR
Sbjct: 154 DVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGF 213
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
G V +L L +M++ + DI +N I SF ++ K++ A K F + GL+PD
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+Y+++I L K+ R DEA + F +E+N P +Y N ++ G+F+EA+ +++
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 491 SKERG 495
+ +G
Sbjct: 334 QRAKG 338
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ +N+++DALVK+ I+ A + FQ M +C P++ TY ILI+G+C++ ++A
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++M+ G P+ +YT +I G A +AE + + K P+ A +++ G
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA---AILRKMG 177
+ AF L R C LL L N +AA A+LR+ G
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 241/497 (48%), Gaps = 8/497 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGISP+ YN +I+ L ++ +D A+ ++M+V +P+ TY LI+G+ ++ D+
Sbjct: 249 LGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDK 308
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
++ +M G G+ PNV + LIDG+C + ++ ++M +N+ P T+ SL+
Sbjct: 309 VNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQ 368
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + A L + C ++++ L A + M R + P
Sbjct: 369 GFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRP 428
Query: 184 ESSTFDYTVTCLVTGLDLN----ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
D +T LV GL + E + +++G T L+ L AG+ E
Sbjct: 429 S----DLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEA 484
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
R + + + L + +YN +I FC ++ + EM R I P++ T+N L+ G
Sbjct: 485 SRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRG 544
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
C ++ +L G + T+ M++ C+A+R ED + +E++ + N
Sbjct: 545 LCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELN 604
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+I YNI+I++ C G+VA +L+L + M++ I P+ T+++LI C + +E A+
Sbjct: 605 SIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLID 664
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M G P+ Y+ALI K G+ D A+ T+L M +P+ +T ++++ + G
Sbjct: 665 EMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLG 724
Query: 480 RFEEAHDIVKTSKERGI 496
E+A++++ KE GI
Sbjct: 725 NMEKANNLLIKMKESGI 741
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 218/492 (44%), Gaps = 36/492 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS + N + +LVK+N + F+ MS C PD F++ +I+ +C+ G ++ A
Sbjct: 181 GTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGAC-PDVFSFTNVINALCKGGKMENA 239
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +ME LG +PNV TY +I+G C R+ F + E M + V PN T +L++G
Sbjct: 240 IELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALING 299
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + F ++ IL +M G+ P
Sbjct: 300 LIK-----------LNFFDK------------------------VNHILDEMIGAGFNPN 324
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F+ + ++ I D I + + P T LM+ K+ + + L
Sbjct: 325 VVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALE 384
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L + ++ V+ CK A + M R+ P+ + L+ G CKD
Sbjct: 385 EILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDG 444
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + EL LLE G K T N++I LC A + +A + EM+E G+P + ITYN
Sbjct: 445 KHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYN 504
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C G V RL ++M I PDIYT+N L++ C + K++ A K +
Sbjct: 505 ALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKAS 564
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL + +Y +++ K+ R ++ + F + +S N+I++ Q G A
Sbjct: 565 GLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAA 624
Query: 485 HDIVKTSKERGI 496
+++ K +GI
Sbjct: 625 LQLLENMKSKGI 636
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 117/498 (23%), Positives = 217/498 (43%), Gaps = 35/498 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ + Y A+I+ L+K N D +M P+ +N LI G C++G ++ A
Sbjct: 285 GVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGA 344
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE-------------------------- 98
L++ M P T L+ GFC + ++
Sbjct: 345 LKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHW 404
Query: 99 ---------VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
FR ++M RN P++ + LV G+ + +A EL R +E+
Sbjct: 405 LCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPAS 464
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
K+ N L++ L EA+ I+++M +RG + T++ + + + +
Sbjct: 465 KVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLRE 524
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
KRG++P TY L+ L G+ + + + L+SN+++Y ++++ +CK N
Sbjct: 525 EMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKAN 584
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
++ + E+ + + N + +N +I HC++ V +LL + G P+ T++
Sbjct: 585 RIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYS 644
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
S+I +C EDA + EM + G PN + Y LI C +G + + + +M +
Sbjct: 645 SLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISF 704
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
I P+ +T+ +I +C++ +EKA M G+ PD +Y+ L K+ D A
Sbjct: 705 NIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNA 764
Query: 450 KQTFLSMEQNGCNPDSYT 467
+ M G D T
Sbjct: 765 FKVCDQMATEGLPVDEIT 782
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 159/356 (44%), Gaps = 41/356 (11%)
Query: 180 GYLPESSTFDYTVTCLVTGL-DLNETCGILDTF---IKRGVKPRFSTYLLLMEALYKAGR 235
G + FD + T +L +C + D F ++G P T + +L KA
Sbjct: 143 GRFEWTQAFDLLIHVYSTQFRNLGFSCAV-DVFYLLARKGTFPSLKTCNFXLSSLVKA-N 200
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
+ E + V + +V S+ VI+ CK M+ A E+ +M I+PN+VT+N
Sbjct: 201 EFEKCCEVFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNC 260
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
+I+G C++ + EL + G +P+ T+ ++I+ L + + F+ L EM+ G
Sbjct: 261 IINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAG 320
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
PN + +N LI C +G++ +L++ M + I+P T +L+Q FC+ ++IE AE
Sbjct: 321 FNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAE 380
Query: 416 KAFFSMLTLGL-----------------------------------RPDNFSYSALIKAL 440
A +L+ GL RP + + L+ L
Sbjct: 381 NALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGL 440
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
K G+ EA + + + + G TSN ++ L G+ EA IVK ERG+
Sbjct: 441 CKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGL 496
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 1/210 (0%)
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
P+L T N +S K E K E+ ++ E G PD F+F ++I+ LC+ + E+A++
Sbjct: 184 PSLKTCNFXLSSLVKANEFEKCCEVFRVMSE-GACPDVFSFTNVINALCKGGKMENAIEL 242
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
+M + G+ PN +TYN +I LC G + + L +KM + P++ T+ ALI +
Sbjct: 243 FMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIK 302
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+N +K M+ G P+ ++ LI K G + A + M P S T
Sbjct: 303 LNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVT 362
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+++ + + E A + ++ G+S
Sbjct: 363 LYSLMQGFCKSDQIEHAENALEEILSSGLS 392
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 65/120 (54%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y A+I K +D A + +M P++FTY ++I G C++G +++A
Sbjct: 670 GFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKA 729
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M+ G P+V TY +L +GFC A + F+V + M + +E T +LVHG
Sbjct: 730 NNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 789
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
ISF I P+ Y +ID K +++ A +M PD TYN+L +G C+
Sbjct: 702 ISF-NIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAND 760
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGF 90
+D A ++ QM G + TYT L+ G+
Sbjct: 761 MDNAFKVCDQMATEGLPVDEITYTTLVHGW 790
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 231/446 (51%), Gaps = 4/446 (0%)
Query: 31 LKFQQMSVDQCK-PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDG 89
LKF + + Q PD LI G CR G +A R+++ +E G P+V TY +LI G
Sbjct: 126 LKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGG 185
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
+C + E+ + LE+++ +V P+ T +++ + +A E+L R ++RE
Sbjct: 186 YCKS---GEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPD 242
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ L+ N+S +A +L +M +G P+ T++ + + L+E L+
Sbjct: 243 VITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLN 302
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
G KP T+ +++ ++ GR ++ +R L+ + + +V ++N++I+ C+
Sbjct: 303 NMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKR 362
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
++ RA ++ +M PN +++N L+ G C++ ++ + E L +++ G PD T+N
Sbjct: 363 LLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYN 422
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+++ LC+ + + A++ L+++ G P ITYN +I L +G ++ L ++M+
Sbjct: 423 TLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRK 482
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ PDI T++ L++ R K+++A K F M L ++P +Y+A++ L K+ + A
Sbjct: 483 GLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRA 542
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETL 475
M + GC P T +++E +
Sbjct: 543 IDFLAYMVEKGCKPTEATYTILIEGI 568
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 223/453 (49%), Gaps = 5/453 (1%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
+ F NI + + R G ++E L+ +++M G P+V T LI GFC + + + R++
Sbjct: 105 EEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIM 164
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSN 162
EI++ P+ T L+ G + + KA E+L ER + +V NT+L L +
Sbjct: 165 EILENSGAVPDVITYNVLIGGYCKSGEIDKALEVL----ERMSVAPDVVTYNTILRSLCD 220
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+ EA +L + R P+ T+ + + + +LD K+G KP T
Sbjct: 221 SGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVT 280
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y +L+ + K GR E ++LN++ NV ++N+++ C A + +M
Sbjct: 281 YNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDML 340
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+ +P++VTFN LI+ C+ + + ++L + + G P+ ++N ++ C+ + +
Sbjct: 341 RKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMD 400
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
A++ L MV G P+ +TYN L+ +LC G V ++ + ++ + SP + T+N +I
Sbjct: 401 RAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVI 460
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
++ K E A + M GL+PD +YS L++ L + G+ DEA + F ME
Sbjct: 461 DGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIK 520
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
P + T N I+ L + + A D + E+G
Sbjct: 521 PSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKG 553
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 209/440 (47%), Gaps = 46/440 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN +I KS ID A ++MSV PD TYN ++ +C G + EA
Sbjct: 171 GAVPDVITYNVLIGGYCKSGEIDKALEVLERMSV---APDVVTYNTILRSLCDSGKLKEA 227
Query: 65 LRLV-KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ ++ +Q++ Y P+V TYTILI+ CN V + ++L+ M+++ P+ T L++
Sbjct: 228 MEVLDRQLQRECY-PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + + I+F+ P + N + + + ILR M G
Sbjct: 287 GICK----EGRLDEAIKFLNNMP-SYGCKPNVITHNI-----------ILRSMCSTGRWM 330
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA---GRDVEGD 240
++ +L +++G P T+ +L+ L + GR ++
Sbjct: 331 DAER-------------------LLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAID-- 369
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L + K V N SYN ++ FC+ MDRA E M R P++VT+NTL++
Sbjct: 370 -VLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTAL 428
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CKD +V E+L L G P T+N++ID L + + E A++ L EM G+ P+
Sbjct: 429 CKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDI 488
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITY+ L+R L G V ++++F M+ I P T+NA++ C+ + +A
Sbjct: 489 ITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAY 548
Query: 421 MLTLGLRPDNFSYSALIKAL 440
M+ G +P +Y+ LI+ +
Sbjct: 549 MVEKGCKPTEATYTILIEGI 568
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 64/125 (51%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G SP YN VID L K + A ++M KPD TY+ L+ G+ R G
Sbjct: 444 LSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGK 503
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VDEA+++ MEGL P+ TY ++ G C A++ + L M E+ P EAT
Sbjct: 504 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTI 563
Query: 121 LVHGV 125
L+ G+
Sbjct: 564 LIEGI 568
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/508 (26%), Positives = 239/508 (47%), Gaps = 22/508 (4%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM- 71
Y+ +I L + I A F M C+PD TY L+ G+C+ G ++ AL+L ++M
Sbjct: 385 YSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEML 444
Query: 72 -----EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
G+ P + +Y+I+IDG C +R E + E MK + + P+ + +L+HG
Sbjct: 445 NDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFC 504
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
KA L ++ + L+ L EA +L + RG + +
Sbjct: 505 LSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVV 564
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T V L +++ + K G P T LM+ L ++G ++
Sbjct: 565 TCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 624
Query: 247 FKDRLVSNVN------SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
D +N SY+++ID CK D A E+ +EM+ + P+++++ +LI G
Sbjct: 625 LSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGF 684
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ + + L +++ G +PD TF+ +ID LC+ + +A + L M++ G PNT
Sbjct: 685 CRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNT 744
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TY L++ LC ++ + +LF KMQ PD+ T+ L++ C+ I+ A +
Sbjct: 745 VTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKK 804
Query: 421 MLT------LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD--SYTSNLIL 472
ML+ +PD SYS +I L K GR DEA++ F M+ G P+ SYTS ++
Sbjct: 805 MLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTS--LI 862
Query: 473 ETLVQQGRFEEAHDIVKTSKERGISFKS 500
+ G+ E+A + ++G+ +
Sbjct: 863 HGFCRSGKLEDAKHLFNEMVDQGVQLNA 890
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/483 (26%), Positives = 229/483 (47%), Gaps = 35/483 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y+ +ID L K D A F++M PD +Y LIHG C G ++A L
Sbjct: 456 PTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCL 515
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+M +G P+V T ++LID C +V E ++LE++ +R + T +LV G+
Sbjct: 516 FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCM 575
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
KA +L ++ + + + C TL+ L + A + + M S T
Sbjct: 576 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM-------LSDT 628
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
Y + C KP +Y ++++ L K GR+ E +
Sbjct: 629 SPYGINC----------------------KPNAISYSIIIDGLCKCGREDEARELFKEMK 666
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
++ +V SY +I FC+ A + EM D + P++ TF+ LI CK+ +V
Sbjct: 667 ALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVI 726
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ ELL ++++ G P+ T+ +++ LC R +A +M + G P+ +TY L+
Sbjct: 727 EANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLM 786
Query: 368 RSLCAIGDVARSLRLFQKMQAD------RISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
+ LC G++ +L L +KM +D PD+ +++ +I C+ + ++A + F M
Sbjct: 787 KGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEM 846
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
LG+ P+ SY++LI +SG+ ++AK F M G ++ T ++++ ++G+
Sbjct: 847 KALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQI 906
Query: 482 EEA 484
++A
Sbjct: 907 DKA 909
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/507 (26%), Positives = 242/507 (47%), Gaps = 23/507 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD------QCKPDRFTYNILIHGICR 57
LG P Y ++ L ++ +I++A Q+M D +CKP +Y+I+I G+C+
Sbjct: 118 LGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCK 177
Query: 58 IGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
DEA L K+M+ G P+V +YT LI GFC++ + + + M + + P+ T
Sbjct: 178 DRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTT 237
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
L+ + +A ELL + R + + +TL+ L SEA + M
Sbjct: 238 SGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMK 297
Query: 178 DRGYLPESSTFDYTVTCLV-TG-----LDLNETCGILDTFIKRGVK---PRFSTYLLLME 228
G P++ + + L TG L L++ +L+ + G+K P +T +L++
Sbjct: 298 KLGCRPDAIAYGTLMKGLCQTGKINIALHLHQE--MLNDTSQYGIKCIRPDVTTSSMLID 355
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
L K G+ +E + L + + + ++ +Y+ +I C + + AT + M+ P
Sbjct: 356 ILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRP 415
Query: 289 NLVTFNTLISGHCKDAEVHKTREL-LVMLLECG-----FKPDKFTFNSMIDCLCRAHRFE 342
+ +T+ TL+ G C+ ++ +L ML + G KP +++ +ID LC+ R +
Sbjct: 416 DAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRED 475
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+A + EM G+ P+ I+Y LI C G ++ LF +M I PD+ T + LI
Sbjct: 476 EARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLI 535
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
C+ K+ +A K ++ G D + + L+K L R +A Q FL M++ GC
Sbjct: 536 DMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCM 595
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVK 489
P+ T +++ L Q G + A ++ K
Sbjct: 596 PNVVTCATLMKGLCQSGNIKIALELHK 622
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 209/465 (44%), Gaps = 59/465 (12%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTI---------LIDGFCNA 93
PD FT+NILI+ +C + V+E L + + GY P++ TY+I LID C
Sbjct: 8 PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE 67
Query: 94 KRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC 153
+V E +LE+M +R + T +L+ G+ C++ H+ E FM QKL C
Sbjct: 68 GKVIEANELLEVMIQRGCILDIVTYSTLIKGL--CME-HRISEATWLFMS----MQKLGC 120
Query: 154 -------NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
TL+ L + A + ++M + T Y + C
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEM-------LNDTGRYGIKC------------ 161
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
KP +Y ++++ L K R+ E + ++ +V SY +I FC
Sbjct: 162 ----------KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFC 211
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
++A + EM D I P++ T LI CK+ +V + ELL +++ G D
Sbjct: 212 HSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIV 271
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T++++I LC HR +A M + G P+ I Y L++ LC G + +L L Q+M
Sbjct: 272 TYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEM 331
Query: 387 QADR-------ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
D I PD+ T + LI C+ K+ +A + M+ G D +YS LIK
Sbjct: 332 LNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 391
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
L R EA F+SM++ GC PD+ T +++ L Q G A
Sbjct: 392 LCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIA 436
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 134/533 (25%), Positives = 219/533 (41%), Gaps = 54/533 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P + +ID L K + A + M C D TY+ LI G+C + EA
Sbjct: 50 IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEAT 109
Query: 66 RLVKQMEGLGYAPNVYT-----------------------------------------YT 84
L M+ LG P+ T Y+
Sbjct: 110 WLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYS 169
Query: 85 ILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMER 144
I+IDG C +R E + + MK + + P+ + SL+HG KA L ++
Sbjct: 170 IIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDV 229
Query: 145 EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNET 204
L+ EA +L M RG + + T+ + L ++E
Sbjct: 230 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEA 289
Query: 205 CGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR-------LVSNVNS 257
+ + K G +P Y LM+ L + G+ + D + +V +
Sbjct: 290 TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTT 349
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
+M+ID CK + A E+ M R ++VT++TLI G C + + + L + +
Sbjct: 350 SSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQ 409
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV----EWGV--PPNTITYNILIRSLC 371
+ G +PD T+ +++ LC+ AL EM+ +G+ P I+Y+I+I LC
Sbjct: 410 KLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLC 469
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
+ LF++M+A I PD+ ++ LI FC K EKA+ F ML +G++PD
Sbjct: 470 KDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVT 529
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ S LI L K G+ EA + + Q GC D T +++ L + R +A
Sbjct: 530 TSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKA 582
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 178/398 (44%), Gaps = 14/398 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI P + +ID L K + A + + C D T L+ G+C + +
Sbjct: 522 VGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISK 581
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER------NVCPNEAT 117
A +L +M+ LG PNV T L+ G C + + + + M N PN +
Sbjct: 582 ATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAIS 641
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
++ G+ +C +A EL + + +L++ + +A + +M
Sbjct: 642 YSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV 701
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
D G P+ +TF + L + E +L+ I+RG P TY L++ L R
Sbjct: 702 DIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRIS 761
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD------RDIAPNLV 291
E + + K + +V +Y ++ C+ + A E+ ++M + P+++
Sbjct: 762 EATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVI 821
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
+++ +I G CK + REL + G P+ ++ S+I CR+ + EDA +EM
Sbjct: 822 SYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEM 881
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
V+ GV N +TY+++I C G + ++ LFQKM+A+
Sbjct: 882 VDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEAN 917
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 172/364 (47%), Gaps = 22/364 (6%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF----DYTVTCLVTGL-----DLNET 204
N L+ L N +E A + + RGY+P+ T+ D T + ++ + + E
Sbjct: 14 NILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKVIEA 73
Query: 205 CGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
+L+ I+RG TY L++ L R E + K + +Y ++
Sbjct: 74 NELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKG 133
Query: 265 FCKVNMMDRATEICREMRDR------DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
C+ ++ A ++ +EM + P L++++ +I G CKD + REL +
Sbjct: 134 LCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKA 193
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
G PD ++ S+I C + ++E A +EM++ G+ P+ T +LI C G V
Sbjct: 194 QGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIE 253
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+ L + M DI T++ LI+ C ++I +A + F SM LG RPD +Y L+K
Sbjct: 254 ANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMK 313
Query: 439 ALIKSGRFDEAKQTFLSM----EQNGCN---PDSYTSNLILETLVQQGRFEEAHDIVKTS 491
L ++G+ + A M Q G PD TS+++++ L ++G+ EA+++++
Sbjct: 314 GLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVM 373
Query: 492 KERG 495
+RG
Sbjct: 374 IQRG 377
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI---------LIRSL 370
G PD FTFN +I+CLC R + L ++ ++ G P+ +TY+I LI L
Sbjct: 5 GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C G V + L + M DI T++ LI+ C ++I +A F SM LG RPD
Sbjct: 65 CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQN------GCNPDSYTSNLILETLVQQGRFEEA 484
+Y L+K L ++G + A Q M + C P + ++I++ L + R +EA
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 184
Query: 485 HDIVKTSKERGI 496
++ K K +G+
Sbjct: 185 RELFKEMKAQGM 196
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 227/492 (46%), Gaps = 35/492 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ T ++N +++ LV+ + + L + +M+ +PD T N LI +CR V A
Sbjct: 157 GVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTA 216
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++++M G AP+ T+T L+ GF + RV M E P TV L++G
Sbjct: 217 VLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLING 276
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A + + + ++ NT ++ L N S A ++ M G+ P+
Sbjct: 277 YCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPD 336
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + CL +L+E GI++ + RG P +T+
Sbjct: 337 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTF--------------------- 375
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
N +I N ++ A ++ RE+ + ++P++ TFN LI+ CK
Sbjct: 376 --------------NTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVG 421
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ H L + G PD+ T+N +ID LC + +ALD L+EM G P +T+TYN
Sbjct: 422 DPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYN 481
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I +LC + + +F +M A IS TFN LI C+ +I+ A + M+
Sbjct: 482 TIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKE 541
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL+P+N +Y++++ K G +A +M NG D T ++ L + GR + A
Sbjct: 542 GLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVA 601
Query: 485 HDIVKTSKERGI 496
+++ + +GI
Sbjct: 602 LKLLRGMRIKGI 613
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/513 (26%), Positives = 229/513 (44%), Gaps = 40/513 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P N +I AL +++ + A L ++MS PD T+ L+ G G ++ A
Sbjct: 192 GIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAA 251
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LR+ +M G +P T +LI+G+C RV + ++ P++ T + VHG
Sbjct: 252 LRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHG 311
Query: 125 VFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ C + H A +++ ++ NT++ LS N EA I+ +M DRG L
Sbjct: 312 L--CQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCL 369
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG--- 239
P+++TF+ + L + L E + +G+ P T+ +L+ AL K G G
Sbjct: 370 PDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRL 429
Query: 240 -----------DRYLNHVFKDRLVS---------------------NVNSYNMVIDCFCK 267
D ++ D L S + +YN +ID CK
Sbjct: 430 FEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCK 489
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
++ A E+ +M + I+ + VTFNTLI G CK + EL+ +++ G +P+ T
Sbjct: 490 KMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNIT 549
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+NS++ C+ + A D L M G + +TY LI LC G +L+L + M+
Sbjct: 550 YNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMR 609
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR-F 446
I P +N +IQS R N + A F M +G PD +Y + ++L + G
Sbjct: 610 IKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPI 669
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
EA + M G P+ + ++ E L+ G
Sbjct: 670 KEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLG 702
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 195/425 (45%), Gaps = 3/425 (0%)
Query: 76 YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAF 135
+AP+ Y ++ A + ++ M+ VRS V R A
Sbjct: 85 FAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAV 144
Query: 136 ELLIRFMEREPL---TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+L++ ++ + +V N LL L S ++ +M RG P+ T + +
Sbjct: 145 DLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLI 204
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L + +L+ GV P +T+ LM+ + G R + +
Sbjct: 205 KALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCS 264
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+ N++I+ +CK+ ++ A ++ P+ VT+NT + G C++ V ++
Sbjct: 265 PTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKV 324
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+ ++L+ G PD FT+N++I+CL + ++A +++MV+ G P+T T+N LI +L +
Sbjct: 325 MDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSS 384
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
+ +L L +++ +SPD+YTFN LI + C++ + F M + G PD +
Sbjct: 385 QNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVT 444
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y+ LI L G+ A ME NGC + T N I++ L ++ R EEA ++
Sbjct: 445 YNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMD 504
Query: 493 ERGIS 497
+GIS
Sbjct: 505 AQGIS 509
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 9/237 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G ST YN +IDAL K I+ A F QM T+N LI G+C+ +D+A
Sbjct: 472 GCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDA 531
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++QM G PN TY ++ +C + + +LE M + T +L++G
Sbjct: 532 TELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLING 591
Query: 125 VFRCLDPHKAFELL----IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + A +LL I+ + P V +L R NN +A + R+M + G
Sbjct: 592 LCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRR--NN--LRDALNLFREMTEVG 647
Query: 181 YLPESSTFDYTVTCLVTGLD-LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
P++ T+ L G + E L + +G P FS++ +L E L G D
Sbjct: 648 EPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMD 704
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/524 (27%), Positives = 234/524 (44%), Gaps = 40/524 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ +YNAVI+AL K ++ A +++ + PD FTY +I G CR +D A
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF------------------------ 100
L++ QM G PN TY+ LI+G C++ RV E F
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329
Query: 101 -----------RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
R+ MK + PN T +L+ G+ A L R
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ N L+ L N A +L MG G P T++ + D + +++
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
++RG TY +++ +G R L+ + + SY +I FCK++
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
M+ A + EM D + PN VT+ LI G+CKD ++ LL + G +P+ T+N
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+I L + + F A + M+E G+ PN +TY +I LC G + +L +F KM
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
P++ T+++LI++ + K+E+AE F + GL PD +Y +I+A I SG+ + A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689
Query: 450 KQTFLSMEQNGCNPDSYTSNLIL-----ETLVQQGRFEEAHDIV 488
M + GC P +T +++ E L+ R D+V
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVV 733
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 213/504 (42%), Gaps = 59/504 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+T YNA+I+ LV++ I A++ M + C P+ TYN +I G C +G +A
Sbjct: 385 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKA 444
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ M G++ N+ TY +I G+C++ R+L++M++ P+E + L+ G
Sbjct: 445 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ AF + +M D G P
Sbjct: 505 FCKISKMESAF-----------------------------------GLFNEMVDDGLCPN 529
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L+ +L+ + G +P TY +L+ L K +
Sbjct: 530 EVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK 589
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ + NV +Y +ID CK A E+ +M ++ PNL+T+++LI ++
Sbjct: 590 VMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEG 649
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V + L L G PD+ T+ MI+ + + E A + L M++ G P TY
Sbjct: 650 KVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYG 709
Query: 365 ILIRS-----------LCAIGDVARSLRL-FQKMQADRISP------------DIYTFNA 400
+LI+ L A+ DV + +Q D +S + NA
Sbjct: 710 VLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNA 769
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
L+ + + +A + SM++ GL PD +Y++L+ +L++ D A F M G
Sbjct: 770 LVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQG 829
Query: 461 CNPDSYTSNLILETLVQQGRFEEA 484
C ++ L Q R +EA
Sbjct: 830 CEVHLNGYKELICALCQLHRRKEA 853
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 121/256 (47%)
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+L+ + + L + +Y+ ++ ++ M + M + PNL+ +N +I+ C
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
KD V ++ + E PD FT+ SMI CR H + AL ++M + G PNT+
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY+ LI LC G V + L ++M I P +T I + C M E A + F M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G P+ ++Y+ALI L SG A F M ++G P++ T N ++ LV+ R
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406
Query: 482 EEAHDIVKTSKERGIS 497
+ A ++ G S
Sbjct: 407 KYAFVVLNLMGRNGCS 422
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 149/298 (50%), Gaps = 2/298 (0%)
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE-GDRYLNHVFKDRLVSNVNSYN 259
+ T LD + G++ Y L+ L + G DRY + + + + N+ YN
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRY-HRMLSEGVQPNLLIYN 219
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
VI+ CK + A I +++ + +++P+ T+ ++I GHC+ ++ ++ + +
Sbjct: 220 AVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 279
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G +P+ T++++I+ LC + R +A D + EM+ G+ P T I +LC +G +
Sbjct: 280 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 339
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
RLF M+ P++YT+ ALI C ++ A F M G+ P+ +Y+ALI
Sbjct: 340 WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 399
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
L+++ R A M +NGC+P+ T N +++ G ++A ++ +RG S
Sbjct: 400 LVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS 457
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 166/427 (38%), Gaps = 24/427 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S + YN +I S + A M CKPD ++Y LI G C+I ++ A
Sbjct: 455 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 514
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +M G PN TYT LIDG+C +++ +LE MK PN T L+HG
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + A EL +E + ++ L N S A + KM ++G LP
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L + E + + G+ P TY+ ++EA +G+ +L
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMM------------------------DRATEICRE 280
+ K + +Y ++I ++ D + + +
Sbjct: 695 RMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAK 754
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
+ + D ++ N L+S + ELL ++ G PD+ +NS++ L R
Sbjct: 755 LAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRN 814
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
+ A+ M G + Y LI +LC + + F+ M +PD
Sbjct: 815 VDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAV 874
Query: 401 LIQSFCR 407
LI R
Sbjct: 875 LIDGLLR 881
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/524 (27%), Positives = 234/524 (44%), Gaps = 40/524 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ +YNAVI+AL K ++ A +++ + PD FTY +I G CR +D A
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF------------------------ 100
L++ QM G PN TY+ LI+G C++ RV E F
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329
Query: 101 -----------RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
R+ MK + PN T +L+ G+ A L R
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPN 389
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ N L+ L N A +L MG G P T++ + D + +++
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
++RG TY +++ +G R L+ + + SY +I FCK++
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
M+ A + EM D + PN VT+ LI G+CKD ++ LL + G +P+ T+N
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+I L + + F A + M+E G+ PN +TY +I LC G + +L +F KM
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
P++ T+++LI++ + K+E+AE F + GL PD +Y +I+A I SG+ + A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689
Query: 450 KQTFLSMEQNGCNPDSYTSNLIL-----ETLVQQGRFEEAHDIV 488
M + GC P +T +++ E L+ R D+V
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVV 733
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 213/504 (42%), Gaps = 59/504 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+T YNA+I+ LV++ I A++ M + C P+ TYN +I G C +G +A
Sbjct: 385 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKA 444
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ M G++ N+ TY +I G+C++ R+L++M++ P+E + L+ G
Sbjct: 445 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ AF + +M D G P
Sbjct: 505 FCKISKMESAF-----------------------------------GLFNEMVDDGLCPN 529
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L+ +L+ + G +P TY +L+ L K +
Sbjct: 530 EVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK 589
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ + NV +Y +ID CK A E+ +M ++ PNL+T+++LI ++
Sbjct: 590 VMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEG 649
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V + L L G PD+ T+ MI+ + + E A + L M++ G P TY
Sbjct: 650 KVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYG 709
Query: 365 ILIRS-----------LCAIGDVARSLRL-FQKMQADRISP------------DIYTFNA 400
+LI+ L A+ DV + +Q D +S + NA
Sbjct: 710 VLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNA 769
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
L+ + + +A + SM++ GL PD +Y++L+ +L++ D A F M G
Sbjct: 770 LVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQG 829
Query: 461 CNPDSYTSNLILETLVQQGRFEEA 484
C ++ L Q R +EA
Sbjct: 830 CEVHLNGYKELICALCQLHRRKEA 853
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 121/256 (47%)
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+L+ + + L + +Y+ ++ ++ M + M + PNL+ +N +I+ C
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
KD V ++ + E PD FT+ SMI CR H + AL ++M + G PNT+
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY+ LI LC G V + L ++M I P +T I + C M E A + F M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G P+ ++Y+ALI L SG A F M ++G P++ T N ++ LV+ R
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406
Query: 482 EEAHDIVKTSKERGIS 497
+ A ++ G S
Sbjct: 407 KYAFVVLNLMGRNGCS 422
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 149/298 (50%), Gaps = 2/298 (0%)
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE-GDRYLNHVFKDRLVSNVNSYN 259
+ T LD + G++ Y L+ L + G DRY + + + + N+ YN
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRY-HRMLSEGVQPNLLIYN 219
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
VI+ CK + A I +++ + +++P+ T+ ++I GHC+ ++ ++ + +
Sbjct: 220 AVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 279
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G +P+ T++++I+ LC + R +A D + EM+ G+ P T I +LC +G +
Sbjct: 280 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 339
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
RLF M+ P++YT+ ALI C ++ A F M G+ P+ +Y+ALI
Sbjct: 340 WRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINI 399
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
L+++ R A M +NGC+P+ T N +++ G ++A ++ +RG S
Sbjct: 400 LVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS 457
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 166/427 (38%), Gaps = 24/427 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S + YN +I S + A M CKPD ++Y LI G C+I ++ A
Sbjct: 455 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 514
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +M G PN TYT LIDG+C +++ +LE MK PN T L+HG
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + A EL +E + ++ L N S A + KM ++G LP
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L + E + + G+ P TY+ ++EA +G+ +L
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMM------------------------DRATEICRE 280
+ K + +Y ++I ++ D + + +
Sbjct: 695 RMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAK 754
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
+ + D ++ N L+S + ELL ++ G PD+ +NS++ L R
Sbjct: 755 LAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRN 814
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
+ A+ M G + Y LI +LC + + F+ M +PD
Sbjct: 815 VDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAV 874
Query: 401 LIQSFCR 407
LI R
Sbjct: 875 LIDGLLR 881
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 245/494 (49%), Gaps = 6/494 (1%)
Query: 8 PSTRL--YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
P RL ++ + + ++ DL +QM + + +T +I+I+ CR + A
Sbjct: 68 PRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAF 127
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ ++ LGY P+ T++ LI+G C RV+E +++ M E P T+ +LV+G+
Sbjct: 128 SAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGL 187
Query: 126 FRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
CL+ A L+ R +E ++ +L + + + A +LRKM +R
Sbjct: 188 --CLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL 245
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ + + L L+ + + +G K Y L+ AGR +G + L
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ K ++ +V +++ +IDCF K + A E+ +EM R I+P+ VT+ +LI G CK+
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ K +L +++ G P+ TFN +I+ C+A+ +D L+ +M GV +T+TY
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI+ C +G + + LFQ+M + R+ PDI ++ L+ C + EKA + F +
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+ D Y+ +I + + + D+A F S+ G PD T N+++ L ++G E
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545
Query: 484 AHDIVKTSKERGIS 497
A + + +E G S
Sbjct: 546 ADLLFRKMEEDGHS 559
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 238/493 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ + + +I+ + + LA+ ++ +PD T++ LI+G+C G V EA
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L LV +M +G+ P + T L++G C +V++ +++ M E PNE T ++
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV 221
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A ELL + ER+ + + ++ L + A + +M +G+ +
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 281
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + ++ +L IKR + P + L++ K G+ E +
Sbjct: 282 IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHK 341
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + + +Y +ID FCK N +D+A + M + PN+ TFN LI+G+CK
Sbjct: 342 EMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN 401
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ EL + G D T+N++I C + E A + EMV V P+ ++Y
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
IL+ LC G+ ++L +F+K++ ++ DI +N +I C +K++ A F S+
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G++PD +Y+ +I L K G EA F ME++G +P+ T N+++ + +G ++
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581
Query: 485 HDIVKTSKERGIS 497
+++ K G S
Sbjct: 582 AKLIEEIKRCGFS 594
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 220/484 (45%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P T ++ +I+ L + A +M KP T N L++G+C G V +
Sbjct: 136 LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSD 195
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+ +M G+ PN TY ++ C + + A +L M+ER + + ++
Sbjct: 196 AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIID 255
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + AF L + ++ TL+ + A +LR M R P
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ F + C V L E + I+RG+ P TY L++ K + + + L
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + N+ ++N++I+ +CK N++D E+ R+M R + + VT+NTLI G C+
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ +EL ++ +PD ++ ++D LC E AL+ ++ + + + Y
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI+I +C V + LF + + PD+ T+N +I C+ + +A+ F M
Sbjct: 496 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G P+ +Y+ LI+A + G ++ + +++ G + D+ T L TL + +
Sbjct: 556 DGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGH 615
Query: 484 AHDI 487
D+
Sbjct: 616 EPDV 619
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 122/498 (24%), Positives = 216/498 (43%), Gaps = 24/498 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y V+ + KS LA ++M + K D Y+I+I G+C+ G +D A
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +ME G+ ++ YT LI GFC A R + ++L M +R + P+ +L+
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A EL ++R + +L+ + +A +L M +G P
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + +++ + RGV TY L++ + G+
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ R+ ++ SY +++D C ++A EI ++ + ++ +N +I G C +
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V +L L G KPD T+N MI LC+ +A +M E G PN TYN
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRIS----------------------PDIYTFNALI 402
ILIR+ GD +S +L ++++ S PD++TF L+
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLL 626
Query: 403 QSFC--RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
+ FC + A F +M +G +P+ +Y+ +IK L+ + M + G
Sbjct: 627 RPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERG 686
Query: 461 CNPDSYTSNLILETLVQQ 478
C P++ T + + L +Q
Sbjct: 687 CQPNAVTKSTFISGLCKQ 704
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 223/482 (46%), Gaps = 40/482 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+S RL + ++D + + +++DL FQ+M+ + +P ++ L + R D L
Sbjct: 38 VSYRERLRSGIVD-IKEDDAVDL----FQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVL 92
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L KQME G A N+YT +I+I+ C ++++ F + + + P+ T +L++G+
Sbjct: 93 DLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGL 152
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
CL+ SEA ++ +M + G+ P
Sbjct: 153 --CLEGR---------------------------------VSEALELVDRMVEMGHKPTL 177
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T + V L +++ ++D ++ G +P TY +++ + K+G+ L
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + ++ + Y+++ID CK +D A + EM + +++ + TLI G C
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+LL +++ PD F+++IDC + + +A + EM++ G+ P+T+TY
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI C + ++ + M + P+I TFN LI +C+ N I+ + F M G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ D +Y+ LI+ + G+ + AK+ F M PD + ++L+ L G E+A
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 486 DI 487
+I
Sbjct: 478 EI 479
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 202/488 (41%), Gaps = 34/488 (6%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y+ +ID L K S+D A+ F +M + K D Y LI G C G D+ +L++ M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
P+V ++ LID F ++ E + + M +R + P+ T SL+ G +
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
KA +L + + N L+ ++ + + RKM RG + ++ T++ +
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L + + R V+P +Y +L++ L G + + K ++
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
++ YN++I C + +D A ++ + + + P++ T+N +I G CK + + L
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFED--------------------------ALD 346
+ E G P+ T+N +I RAH E AL
Sbjct: 550 FRKMEEDGHSPNGCTYNILI----RAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALS 605
Query: 347 CLSEMVEWGVPPNTITYNILIRSLC--AIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
L+ M++ G P+ T+ L+R C V + LF+ M+A P++ T+N +I+
Sbjct: 606 TLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKG 665
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
N I + M G +P+ + S I L K A ME + N D
Sbjct: 666 LLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMEND--NED 723
Query: 465 SYTSNLIL 472
T IL
Sbjct: 724 VTTKKKIL 731
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 169/387 (43%), Gaps = 15/387 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP T Y ++ID K N +D A M C P+ T+NILI+G C+ ++D+
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG 406
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L ++M G + TY LI GFC ++ + + M R V P+ + + L+ G
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +P KA E+ + + + + N +++ + N S +A + + +G P+
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L L+E + + G P TY +L+ A G + + +
Sbjct: 527 VKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIE 586
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC--K 302
+ + + ++ + + M+ E P++ TF TL+ C +
Sbjct: 587 EIKRCGFSVDASTLRFALSTLAR--MLKAGHE-----------PDVFTFTTLLRPFCLEE 633
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+A V+ L + G+KP+ T+N++I L + L +M E G PN +T
Sbjct: 634 NASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVT 693
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQAD 389
+ I LC ++ L +KM+ D
Sbjct: 694 KSTFISGLCKQDLHGSAILLLRKMEND 720
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 106/224 (47%)
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
D A ++ +EM P L+ F+ L S + + +L + G + +T + M
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
I+C CR + A + ++++ G P+T+T++ LI LC G V+ +L L +M
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
P + T NAL+ C K+ A M+ G +P+ +Y ++K + KSG+ A +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
ME+ D+ ++I++ L + G + A ++ + +G
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 148/321 (46%), Gaps = 18/321 (5%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ T YN +I + +++A FQ+M + +PD +Y IL+ G+C G
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
++AL + +++E ++ Y I+I G CNA +V + + + + + V P+ T
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS-NNSMASEAAAILRKMGDR 179
++ G+ + +A +LL R ME + + +L R A+++A ++ ++
Sbjct: 533 MIGGLCKKGSLSEA-DLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRC 591
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEA--LYKAGRDV 237
G+ ++ST + ++ L +K G +P T+ L+ L +
Sbjct: 592 GFSVDASTLRFALSTLA-------------RMLKAGHEPDVFTFTTLLRPFCLEENASVY 638
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ ++ NV +YN VI NM+ + + +M +R PN VT +T I
Sbjct: 639 DAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFI 698
Query: 298 SGHCKDAEVHKTRELLVMLLE 318
SG CK ++H + LL+ +E
Sbjct: 699 SGLCKQ-DLHGSAILLLRKME 718
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/524 (27%), Positives = 234/524 (44%), Gaps = 40/524 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ +YNAVI+AL K ++ A +++ + PD FTY +I G CR +D A
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF------------------------ 100
L++ QM G PN TY+ LI+G C++ RV E F
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329
Query: 101 -----------RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
R+ MK + PN T +L+ G+ A L R
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ N L+ L N A +L MG G P T++ + D + +++
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
++RG TY +++ +G R L+ + + SY +I FCK++
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
M+ A + EM D + PN VT+ LI G+CKD ++ LL + G +P+ T+N
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+I L + + F A + M+E G+ PN +TY +I LC G + +L +F KM
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
P++ T+++LI++ + K+E+AE F + GL PD +Y +I+A I SG+ + A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689
Query: 450 KQTFLSMEQNGCNPDSYTSNLIL-----ETLVQQGRFEEAHDIV 488
M + GC P +T +++ E L+ R D+V
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVV 733
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 213/504 (42%), Gaps = 59/504 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+T YNA+I+ LV++ I A++ M + C P+ TYN +I G C +G +A
Sbjct: 385 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKA 444
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ M G++ N+ TY +I G+C++ R+L++M++ P+E + L+ G
Sbjct: 445 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ AF + +M D G P
Sbjct: 505 FCKISKMESAF-----------------------------------GLFNEMVDDGLCPN 529
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L+ +L+ + G +P TY +L+ L K +
Sbjct: 530 EVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK 589
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ + NV +Y +ID CK A E+ +M ++ PNL+T+++LI ++
Sbjct: 590 VMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEG 649
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V + L L G PD+ T+ MI+ + + E A + L M++ G P TY
Sbjct: 650 KVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYG 709
Query: 365 ILIRS-----------LCAIGDVARSLRL-FQKMQADRISP------------DIYTFNA 400
+LI+ L A+ DV + +Q D +S + NA
Sbjct: 710 VLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNA 769
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
L+ + + +A + SM++ GL PD +Y++L+ +L++ D A F M G
Sbjct: 770 LVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQG 829
Query: 461 CNPDSYTSNLILETLVQQGRFEEA 484
C ++ L Q R +EA
Sbjct: 830 CEVHLNGYKELICALCQLHRRKEA 853
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 121/256 (47%)
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+L+ + + L + +Y+ ++ ++ M + M + PNL+ +N +I+ C
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
KD V ++ + E PD FT+ SMI CR H + AL ++M + G PNT+
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY+ LI LC G V + L ++M I P +T I + C M E A + F M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G P+ ++Y+ALI L SG A F M ++G P++ T N ++ LV+ R
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406
Query: 482 EEAHDIVKTSKERGIS 497
+ A ++ G S
Sbjct: 407 KYAFVVLNLMGRNGCS 422
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 149/298 (50%), Gaps = 2/298 (0%)
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE-GDRYLNHVFKDRLVSNVNSYN 259
+ T LD + G++ Y L+ L + G DRY + + + + N+ YN
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRY-HRMLSEGVQPNLLIYN 219
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
VI+ CK + A I +++ + +++P+ T+ ++I GHC+ ++ ++ + +
Sbjct: 220 AVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 279
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G +P+ T++++I+ LC + R +A D + EM+ G+ P T I +LC +G +
Sbjct: 280 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 339
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
RLF M+ P++YT+ ALI C ++ A F M G+ P+ +Y+ALI
Sbjct: 340 WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 399
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
L+++ R A M +NGC+P+ T N +++ G ++A ++ +RG S
Sbjct: 400 LVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS 457
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 166/427 (38%), Gaps = 24/427 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S + YN +I S + A M CKPD ++Y LI G C+I ++ A
Sbjct: 455 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 514
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +M G PN TYT LIDG+C +++ +LE MK PN T L+HG
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + A EL +E + ++ L N S A + KM ++G LP
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L + E + + G+ P TY+ ++EA +G+ +L
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMM------------------------DRATEICRE 280
+ K + +Y ++I ++ D + + +
Sbjct: 695 RMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAK 754
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
+ + D ++ N L+S + ELL ++ G PD+ +NS++ L R
Sbjct: 755 LAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRN 814
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
+ A+ M G + Y LI +LC + + F+ M +PD
Sbjct: 815 VDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAV 874
Query: 401 LIQSFCR 407
LI R
Sbjct: 875 LIDGLLR 881
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 245/494 (49%), Gaps = 6/494 (1%)
Query: 8 PSTRL--YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
P RL ++ + + ++ DL +QM + + +T +I+I+ CR + A
Sbjct: 68 PRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAF 127
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ ++ LGY P+ T++ LI+G C RV+E +++ M E P T+ +LV+G+
Sbjct: 128 SAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGL 187
Query: 126 FRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
CL+ A L+ R +E ++ +L + + + A +LRKM +R
Sbjct: 188 --CLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL 245
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ + + L L+ + + +G K Y L+ AGR +G + L
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ K ++ +V +++ +IDCF K + A E+ +EM R I+P+ VT+ +LI G CK+
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ K +L +++ G P+ TFN +I+ C+A+ +D L+ +M GV +T+TY
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI+ C +G + + LFQ+M + R+ PDI ++ L+ C + EKA + F +
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+ D Y+ +I + + + D+A F S+ G PD T N+++ L ++G E
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545
Query: 484 AHDIVKTSKERGIS 497
A + + +E G S
Sbjct: 546 ADLLFRKMEEDGHS 559
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 238/493 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ + + +I+ + + LA+ ++ +PD T++ LI+G+C G V EA
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L LV +M +G+ P + T L++G C +V++ +++ M E PNE T ++
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV 221
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A ELL + ER+ + + ++ L + A + +M +G+ +
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 281
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + ++ +L IKR + P + L++ K G+ E +
Sbjct: 282 IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHK 341
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + + +Y +ID FCK N +D+A + M + PN+ TFN LI+G+CK
Sbjct: 342 EMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN 401
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ EL + G D T+N++I C + E A + EMV V P+ ++Y
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
IL+ LC G+ ++L +F+K++ ++ DI +N +I C +K++ A F S+
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G++PD +Y+ +I L K G EA F ME++G +P+ T N+++ + +G ++
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581
Query: 485 HDIVKTSKERGIS 497
+++ K G S
Sbjct: 582 AKLIEEIKRCGFS 594
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 116/481 (24%), Positives = 223/481 (46%), Gaps = 1/481 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P T ++ +I+ L + A +M KP T N L++G+C G V +
Sbjct: 136 LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSD 195
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+ +M G+ PN TY ++ C + + A +L M+ER + + ++
Sbjct: 196 AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIID 255
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + AF L + ++ TL+ + A +LR M R P
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ F + C V L E + I+RG+ P TY L++ K + + + L
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + N+ ++N++I+ +CK N++D E+ R+M R + + VT+NTLI G C+
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ +EL ++ +PD ++ ++D LC E AL+ ++ + + + Y
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI+I +C V + LF + + PD+ T+N +I C+ + +A+ F M
Sbjct: 496 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G P+ +Y+ LI+A + G ++ + +++ G + D+ T ++++ L GR ++
Sbjct: 556 DGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRLKK 614
Query: 484 A 484
+
Sbjct: 615 S 615
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 223/482 (46%), Gaps = 40/482 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+S RL + ++D + + +++DL FQ+M+ + +P ++ L + R D L
Sbjct: 38 VSYRERLRSGIVD-IKEDDAVDL----FQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVL 92
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L KQME G A N+YT +I+I+ C ++++ F + + + P+ T +L++G+
Sbjct: 93 DLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGL 152
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
CL+ SEA ++ +M + G+ P
Sbjct: 153 --CLEGR---------------------------------VSEALELVDRMVEMGHKPTL 177
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T + V L +++ ++D ++ G +P TY +++ + K+G+ L
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + ++ + Y+++ID CK +D A + EM + +++ + TLI G C
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+LL +++ PD F+++IDC + + +A + EM++ G+ P+T+TY
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI C + ++ + M + P+I TFN LI +C+ N I+ + F M G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ D +Y+ LI+ + G+ + AK+ F M PD + ++L+ L G E+A
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 486 DI 487
+I
Sbjct: 478 EI 479
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 150/372 (40%), Gaps = 35/372 (9%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y+ +ID L K S+D A+ F +M + K D Y LI G C G D+ +L++ M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
P+V ++ LID F ++ E + + M +R + P+ T SL+ G +
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
KA +L + + N L+ ++ + + RKM RG + ++ T++ +
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL- 251
L + + R V+P +Y +L++ L G + + K ++
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 252 ----------------------------------VSNVNSYNMVIDCFCKVNMMDRATEI 277
+V +YN++I CK + A +
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
R+M + +PN T+N LI H + + K+ +L+ + CGF D T ++D L
Sbjct: 550 FRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSD 609
Query: 338 AHRFEDALDCLS 349
+ LD LS
Sbjct: 610 GRLKKSFLDMLS 621
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 106/224 (47%)
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
D A ++ +EM P L+ F+ L S + + +L + G + +T + M
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
I+C CR + A + ++++ G P+T+T++ LI LC G V+ +L L +M
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
P + T NAL+ C K+ A M+ G +P+ +Y ++K + KSG+ A +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
ME+ D+ ++I++ L + G + A ++ + +G
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 97/199 (48%), Gaps = 2/199 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ T YN +I + +++A FQ+M + +PD +Y IL+ G+C G
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
++AL + +++E ++ Y I+I G CNA +V + + + + + V P+ T
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS-NNSMASEAAAILRKMGDR 179
++ G+ + +A +LL R ME + + +L R A+++A ++ ++
Sbjct: 533 MIGGLCKKGSLSEA-DLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRC 591
Query: 180 GYLPESSTFDYTVTCLVTG 198
G+ ++ST V L G
Sbjct: 592 GFSVDASTVKMVVDMLSDG 610
>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 245/498 (49%), Gaps = 15/498 (3%)
Query: 8 PSTRLYNAVIDALVK----SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
PS + + ++ +V+ + +I L F + ++ D T NI+I+ +CR+ +V
Sbjct: 74 PSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIE---ADTITLNIVINCLCRLKLVAF 130
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
++ M LG P V T T LI+G C VA+ +++ M++ + T L++
Sbjct: 131 GFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLIN 190
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + D A E L + ER +V +T++ L + + SEA + +M +G P
Sbjct: 191 GLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRP 250
Query: 184 ESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
T+ CL+ GL ET +LD IK G++ T +L++A K G+ ++
Sbjct: 251 NLVTY----ACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQA 306
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + +V +YN +I +C N M+ A + M R P++V F +LI G
Sbjct: 307 KSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHG 366
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CKD ++K LL + + GF PD T+ ++I C+A R A + M ++G PN
Sbjct: 367 WCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPN 426
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
T +++ LC ++ ++ L + M+ + +I ++ L+ C K+ A + F
Sbjct: 427 LQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFS 486
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
S+ GL+ + ++Y+ +IK L K G D+A+ ++ME+NGC PD+ T N+ ++ L+ +
Sbjct: 487 SLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKK 546
Query: 480 RFEEAHDIVKTSKERGIS 497
+ + +++G S
Sbjct: 547 EIARSIKYLTIMRDKGFS 564
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 120/552 (21%), Positives = 214/552 (38%), Gaps = 111/552 (20%)
Query: 21 VKSNSIDLAYLKFQQMSVDQCKPDRFT----YNILIHGICRIGVV---DEALRLVKQMEG 73
++S S L + K S + D + + I + +C+ G V DEAL L + M
Sbjct: 10 IRSPSFSLFFSKHCHCSTNTYDTDSHSNGTQFLISMRNLCKSGKVKNIDEALDLFQGMAS 69
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
+ P+V +T+L+ K T SLV +F L
Sbjct: 70 MKPLPSVKDFTLLLGVIVRLKHYT-------------------TAISLVKHIFSSLG--- 107
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
+E + +T +V N L RL + + ++L M G P T +
Sbjct: 108 --------IEADTITLNIVINCLC-RLK---LVAFGFSVLGTMFKLGLEPTVMTLTALIN 155
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
L ++ + G++D K TY +L+ L K G + +L + +
Sbjct: 156 GLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKP 215
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG-------------- 299
NV Y+ ++D CK ++ A +C EM + + PNLVT+ LI G
Sbjct: 216 NVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLL 275
Query: 300 ---------------------HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
CK+ +V + + ++ ++ G PD FT+NS+I C
Sbjct: 276 DEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQ 335
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
++ +A+ MV G P+ + + LI C ++ + + L ++M PD+ T+
Sbjct: 336 NKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTW 395
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPD----------------------------- 429
LI FC+ + A++ F +M G P+
Sbjct: 396 TTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEK 455
Query: 430 -NFS-----YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
N YS L+ + +G+ + A + F S+ G + YT ++++ L +QG ++
Sbjct: 456 SNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDK 515
Query: 484 AHDIVKTSKERG 495
A D++ +E G
Sbjct: 516 AEDLLINMEENG 527
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 84/194 (43%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P + +I ++ A F M P+ T +++ G+C+ ++ E
Sbjct: 386 MGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSE 445
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L + ME N+ Y+IL+DG C+A ++ + + + + + N T ++
Sbjct: 446 AVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIK 505
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + KA +LLI E L N + L + + L M D+G+
Sbjct: 506 GLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSV 565
Query: 184 ESSTFDYTVTCLVT 197
+++T + T+ L T
Sbjct: 566 DAATTEITINYLST 579
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 240/490 (48%), Gaps = 4/490 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ +N + A+ K+ +L +QM +T +I+I+ CR + A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ LGY P+ + L++G C RV+E +++ M E P T+ +LV+G+
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGL-- 203
Query: 128 CLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
CL+ A L+ R +E ++ +L + + + A +LRKM +R ++
Sbjct: 204 CLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+ + L L+ + + +G K TY L+ AGR +G + L
Sbjct: 264 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD 323
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ K ++ NV +++++ID F K + A ++ +EM R IAPN +T+N+LI G CK+
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + +++ +++ G PD TFN +I+ C+A+R +D L+ EM GV NT+TYN
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L++ C G + + +LFQ+M + R+ PDI ++ L+ C ++EKA + F +
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ D Y +I + + + D+A F S+ G D+ N+++ L ++ +A
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563
Query: 486 DIVKTSKERG 495
+ + E G
Sbjct: 564 ILFRKMTEEG 573
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 230/470 (48%), Gaps = 4/470 (0%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F+ M + P +N L I + + L L KQME G A ++YT +I+I+ FC
Sbjct: 76 FRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCR 135
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD--PHKAFELLIRFMEREPLTQK 150
++++ F + + + P+ +L++G+ CL+ +A EL+ R +E
Sbjct: 136 CRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGL--CLECRVSEALELVDRMVEMGHKPTL 193
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
+ NTL+ L N S+A ++ +M + G+ P T+ + + +L
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
+R +K Y ++++ L K G N + +++ +YN +I FC
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
D ++ R+M R I+PN+VTF+ LI K+ ++ + +LL +++ G P+ T+NS
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+ID C+ +R E+A+ + M+ G P+ +T+NILI C + L LF++M
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ + T+N L+Q FC+ K+E A+K F M++ +RPD SY L+ L +G ++A
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL 493
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+ F +E++ D +I+ + + ++A D+ + +G+ +
Sbjct: 494 EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA 543
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 236/491 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ S + +I+ + + A+ ++ +PD +N L++G+C V EA
Sbjct: 118 GIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEA 177
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L LV +M +G+ P + T L++G C +V++ +++ M E PNE T +++
Sbjct: 178 LELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNV 237
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A ELL + ER + + ++ L + A + +M +G+ +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 297
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + ++ +L IKR + P T+ +L+++ K G+ E D+ L
Sbjct: 298 IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + N +YN +ID FCK N ++ A ++ M + P+++TFN LI+G+CK
Sbjct: 358 EMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKAN 417
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ EL + G + T+N+++ C++ + E A EMV V P+ ++Y
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
IL+ LC G++ ++L +F K++ ++ DI + +I C +K++ A F S+
Sbjct: 478 ILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G++ D +Y+ +I L + +A F M + G PD T N+++ + A
Sbjct: 538 GVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTA 597
Query: 485 HDIVKTSKERG 495
++++ K G
Sbjct: 598 AELIEEMKSSG 608
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 226/491 (46%), Gaps = 4/491 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P T ++N +++ L + A +M KP T N L++G+C G V +
Sbjct: 152 LGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSD 211
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+ +M G+ PN TY +++ C + + A +L M+ERN+ + ++
Sbjct: 212 AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + AF L ME + ++ NTL+ N + A +LR M R
Sbjct: 272 GLCKDGSLDNAFNLF-NEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P TF + V L E +L ++RG+ P TY L++ K R E +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
++ + ++ ++N++I+ +CK N +D E+ REM R + N VT+NTL+ G C+
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ ++L ++ +PD ++ ++D LC E AL+ ++ + + +
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y I+I +C V + LF + + D +N +I CR + + KA+ F M
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G PD +Y+ LI+A + A + M+ +G D T +++ L G +
Sbjct: 571 EEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML-SSGELD 629
Query: 483 EAH-DIVKTSK 492
++ D++ T++
Sbjct: 630 KSFLDMLSTTR 640
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 100/224 (44%)
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
D A ++ R+M P ++ FN L S K + L + G +T + M
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
I+C CR + A + ++++ G P+T+ +N L+ LC V+ +L L +M
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
P + T N L+ C K+ A M+ G +P+ +Y ++ + KSG+ A +
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
ME+ D+ ++I++ L + G + A ++ + +G
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 93/198 (46%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ +T YN ++ +S +++A FQ+M + +PD +Y IL+ G+C G
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++AL + ++E ++ Y I+I G CNA +V + + + + + V +
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNI 548
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ + R KA L + E +L N L+ + A+ AA ++ +M G
Sbjct: 549 MISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG 608
Query: 181 YLPESSTFDYTVTCLVTG 198
+ + ST + L +G
Sbjct: 609 FPADVSTVKMVINMLSSG 626
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 226/496 (45%), Gaps = 35/496 (7%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ G+ T +YN +++ L + + + L + +M+ +PD T N LI +CR
Sbjct: 151 LNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQ 210
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V A+ ++++M AP+ T+T L+ GF + RV M E P TV
Sbjct: 211 VRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNV 270
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L++G + A + + + ++ NT ++ L N S A ++ M G
Sbjct: 271 LINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEG 330
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ P+ T++ + CL +L+E GI++ + RG P +T+
Sbjct: 331 HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTF----------------- 373
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
N +I C N ++ A ++ RE+ + ++P++ TFN LI+
Sbjct: 374 ------------------NTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINAL 415
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK + H L + G PD+ T+N +ID LC + +ALD L EM G P +T
Sbjct: 416 CKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRST 475
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TYN +I +LC + + +F +M A IS TFN LI C+ +I+ A +
Sbjct: 476 VTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQ 535
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ GL+P N +Y++++ K G +A +M NG D T ++ L + GR
Sbjct: 536 MVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGR 595
Query: 481 FEEAHDIVKTSKERGI 496
+ A +++ + +GI
Sbjct: 596 TQVALKLLRGMRIKGI 611
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/513 (26%), Positives = 225/513 (43%), Gaps = 40/513 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P N +I AL +++ + A L ++MS PD T+ L+ G G ++ A
Sbjct: 190 GIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAA 249
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LR+ +M G +P T +LI+G+C RV + ++ P++ T + VH
Sbjct: 250 LRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHC 309
Query: 125 VFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ C + H A +++ ++ NT++ LS N EA I+ +M DRG L
Sbjct: 310 L--CQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCL 367
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG--- 239
P+++TF+ + L + L E + +G+ P T+ +L+ AL K G G
Sbjct: 368 PDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRL 427
Query: 240 -----------DRYLNHVFKDRLVS---------------------NVNSYNMVIDCFCK 267
D ++ D L S + +YN +ID CK
Sbjct: 428 FEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCK 487
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
++ A E+ +M I+ + VTFNTLI G CK + EL+ +++ G +P T
Sbjct: 488 QMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNIT 547
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+NS++ C+ + A D L M G + +TY LI LC G +L+L + M+
Sbjct: 548 YNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMR 607
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR-F 446
I P +N +IQS R N + A F M +G PD +Y + + L + G
Sbjct: 608 IKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPI 667
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
EA + M G P+ + ++ E L+ G
Sbjct: 668 KEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLG 700
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 171/347 (49%), Gaps = 2/347 (0%)
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
V N LL L+ S ++ +M DRG P+ T + + L + +L+
Sbjct: 162 VYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEM 221
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
V P +T+ LM+ + G R + + + N++I+ +CK+ +
Sbjct: 222 SSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRV 281
Query: 272 DRATE-ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+ A I +E+ D P+ VT+NT + C++ V +++ ++L+ G PD FT+N+
Sbjct: 282 EDALGYIQKEIAD-GFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNT 340
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I+CL + ++A +++MV+ G P+T T+N LI +LC+ + +L L +++
Sbjct: 341 VINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKG 400
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+SPD+YTFN LI + C++ + F M + G PD +Y+ LI L G+ A
Sbjct: 401 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNAL 460
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
ME NGC + T N I++ L +Q R EEA ++ GIS
Sbjct: 461 DLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGIS 507
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 194/444 (43%), Gaps = 36/444 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN + L ++ + A M + PD FTYN +I+ + + G +DEA
Sbjct: 295 GFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 354
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+V QM G P+ T+ LI C+ R+ E + + + + P+ T L++
Sbjct: 355 KGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINA 414
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + DPH L IR E +M G P+
Sbjct: 415 LCKVGDPH----LGIRLFE-------------------------------EMKSSGCAPD 439
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L + L +L G TY +++AL K R E + +
Sbjct: 440 EVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFD 499
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + ++N +ID CK +D ATE+ +M + P+ +T+N++++ +CK
Sbjct: 500 QMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQG 559
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ K ++L + GF+ D T+ ++I+ LC+A R + AL L M G+ P YN
Sbjct: 560 DLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYN 619
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR-MNKIEKAEKAFFSMLT 423
+I+SL ++ +L LF++M PD T+ + + CR I++A M+
Sbjct: 620 PVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVN 679
Query: 424 LGLRPDNFSYSALIKALIKSGRFD 447
G P+ S+ L + L+ G D
Sbjct: 680 KGFMPEFSSFRMLAEGLLNLGMDD 703
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 70/178 (39%), Gaps = 1/178 (0%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
F P + + +I L A F+ + EM G + S + ++
Sbjct: 85 FAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAV 144
Query: 381 RLFQ-KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
L + ++ + D +N L+ ++++ E + M G++PD + + LIKA
Sbjct: 145 DLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKA 204
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
L ++ + A M + PD T +++ +++G E A + E G S
Sbjct: 205 LCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCS 262
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 222/474 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P R +A+++AL + F + KPD + Y +++ +C + ++A
Sbjct: 185 GLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKA 244
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ Q EG G + ++ TY + I+G C +KRV E V + E+ + + T +LV G
Sbjct: 245 KEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLG 304
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R + E++ +E + + + L+ L A +L K+G G +P
Sbjct: 305 LCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPN 364
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + L L E + +RG+ P TY +L++ + + Y N
Sbjct: 365 LFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFN 424
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + + V SYN +I+C CK M A + +EM D+ + P + T+ +LISG+CKD
Sbjct: 425 KMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDG 484
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V K +L + G P+ TF ++I LC+ ++ +A EMVE + PN +TYN
Sbjct: 485 LVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYN 544
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI C G+ R+ L +M +SPD YT+ LI C ++ +A++ +
Sbjct: 545 VLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHK 604
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
R D Y+AL++ K GR EA M G D + +++ + Q
Sbjct: 605 HQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQ 658
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 218/485 (44%), Gaps = 10/485 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GIS + YN++I+ K + +A L F++M KP TY LI G C+ G+V +A
Sbjct: 430 GISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKA 489
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L +M G G APN T+T LI G C ++AE ++ + M E + PNE T L+ G
Sbjct: 490 FKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEG 549
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + +AFELL +++ L+ L + SEA + + + +
Sbjct: 550 HCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLD 609
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + E + RG++ +Y +L+ +G + DR L
Sbjct: 610 ELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLI-----SGALNQNDRILF 664
Query: 245 HVFKDRLVSNVNS----YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ ++ + Y ++ID F K + +A E M PN VT+ L++G
Sbjct: 665 ELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGL 724
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K V++ + L +L P+ T+ +D L + E+AL + M++ G NT
Sbjct: 725 FKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANT 783
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TYNILIR C IG + +L M + PD T++ I +C+ ++ A +
Sbjct: 784 VTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWEC 843
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
ML GL+PD ++ LI A +G D A Q M G P T + ++ L Q+ R
Sbjct: 844 MLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRAR 903
Query: 481 FEEAH 485
+
Sbjct: 904 LTQVQ 908
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 206/442 (46%), Gaps = 2/442 (0%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
+++LI + V + + +V M G P V T + L++ ++ +V + + +
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
V P+ +V + D +KA E++ + + N + L +
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVW 277
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
EA + R +G++G + T+ V L + ++D I+ G P + L+
Sbjct: 278 EAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLI 337
Query: 228 EALYKAGRDVEGD-RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
E L K G +EG LN V K +V N+ YN +I+ CK ++ A + M +R +
Sbjct: 338 EGLIKMG-SIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGL 396
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN VT+ LI G + A++ ++ECG +++NSMI+C C+ + + A
Sbjct: 397 NPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAEL 456
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
EMV+ G+ P TY LI C G V ++ +L+ +M I+P+ TF ALI C
Sbjct: 457 LFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLC 516
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
++NK+ +A K F M+ L + P+ +Y+ LI+ + G A + M + G +PD+Y
Sbjct: 517 QINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTY 576
Query: 467 TSNLILETLVQQGRFEEAHDIV 488
T ++ L GR EA + +
Sbjct: 577 TYRPLIAGLCSTGRVSEAKEFI 598
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 220/493 (44%), Gaps = 4/493 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ Y +ID + +D+A+ F +M ++YN +I+ C+ G + A
Sbjct: 395 GLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMA 454
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L K+M G P V TYT LI G+C V + F++ M + + PN T +L+ G
Sbjct: 455 ELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICG 514
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A +L +E + L ++ N L+ + A +L +M +G P+
Sbjct: 515 LCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPD 574
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T+ + L + ++E ++ + + Y L++ K GR E
Sbjct: 575 TYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQ 634
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT-EICREMRDRDIAPNLVTFNTLISGHCKD 303
+ L ++ SY ++I +N DR E+ REM + + P+ V + LI G K
Sbjct: 635 EMVGRGLQMDLVSYAVLISG--ALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKS 692
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ K E +++ G+ P+ T+ ++++ L +A +A M+ PN ITY
Sbjct: 693 GNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITY 752
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+ L G++ +L+L M + + T+N LI+ +C++ K ++A K M+
Sbjct: 753 GCFLDHLTKEGNMENALQLHNAMLQGSFANTV-TYNILIRGYCQIGKFQEAAKLLDVMIG 811
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+G+ PD +YS I K G D A + M Q G PD N ++ G +
Sbjct: 812 IGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDR 871
Query: 484 AHDIVKTSKERGI 496
A + RG+
Sbjct: 872 ALQLRNDMMLRGL 884
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 164/368 (44%)
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
+PH+ FE ++ + + L+ N + ++ M D G LPE T
Sbjct: 135 NPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLS 194
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
+ L + + DT + GVKP Y ++++ L + + +N +
Sbjct: 195 ALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGN 254
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
++ +YN+ I+ CK + A E+ R + ++ + +LVT+ TL+ G C+ E
Sbjct: 255 GCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVG 314
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
E++ ++E G+ P + + +I+ L + E A + L+++ + GV PN YN +I S
Sbjct: 315 MEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINS 374
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
LC G + + LF M ++P+ T+ LI F R K++ A F M+ G+
Sbjct: 375 LCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISAT 434
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+SY+++I K G+ A+ F M G P T ++ + G +A +
Sbjct: 435 VYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYH 494
Query: 490 TSKERGIS 497
+GI+
Sbjct: 495 EMTGKGIA 502
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 174/400 (43%), Gaps = 32/400 (8%)
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP----- 183
++PH ++LIR ++ L + L+R ++S AS I + + + P
Sbjct: 67 IEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFWPASSLL 126
Query: 184 ---------------------------ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
SS FD + V + + +++ G+
Sbjct: 127 QTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGL 186
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
P T L+ AL + + + + + + + Y +V+ C C++ ++A E
Sbjct: 187 LPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKE 246
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
I + + ++VT+N I+G CK V + E+ L E G K D T+ +++ LC
Sbjct: 247 IINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLC 306
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
R FE ++ + EM+E G P+ + LI L +G + + L K+ + P+++
Sbjct: 307 RIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLF 366
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
+N++I S C+ K+E+AE F M GL P++ +Y+ LI + + D A F M
Sbjct: 367 VYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKM 426
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ G + Y+ N ++ + G+ + A + K ++G+
Sbjct: 427 IECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGL 466
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P Y+ I K ++D A ++ M KPDR +N LIH C G +D
Sbjct: 812 IGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDR 871
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV 99
AL+L M G P TY L+ R+ +V
Sbjct: 872 ALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQV 907
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 241/497 (48%), Gaps = 8/497 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGISP+ YN +I+ L ++ +D A+ ++M+V +P+ TY LI+G+ ++ D+
Sbjct: 272 LGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDK 331
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
++ +M G G+ PNV + LIDG+C + ++ ++M +N+ P T+ SL+
Sbjct: 332 VNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQ 391
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + A L + C ++++ L A + M R + P
Sbjct: 392 GFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRP 451
Query: 184 ESSTFDYTVTCLVTGLDLN----ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
D +T LV GL + E + +++G T L+ L AG+ E
Sbjct: 452 S----DLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEA 507
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
R + + + L + +YN +I FC ++ + EM R I P++ T+N L+ G
Sbjct: 508 SRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRG 567
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
C ++ +L G + T+ M++ C+A+R ED + +E++ + N
Sbjct: 568 LCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELN 627
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+I YNI+I++ C G+VA +L+L + M++ I P+ T+++LI C + +E A+
Sbjct: 628 SIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLID 687
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M G P+ Y+ALI K G+ D A+ T+L M +P+ +T ++++ + G
Sbjct: 688 EMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLG 747
Query: 480 RFEEAHDIVKTSKERGI 496
E+A++++ KE GI
Sbjct: 748 NMEKANNLLIKMKESGI 764
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 219/492 (44%), Gaps = 36/492 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS + N ++ +LVK+N + F+ MS C PD F++ +I+ +C+ G ++ A
Sbjct: 204 GTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGAC-PDVFSFTNVINALCKGGKMENA 262
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +ME LG +PNV TY +I+G C R+ F + E M + V PN T +L++G
Sbjct: 263 IELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALING 322
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + F ++ +L +M G+ P
Sbjct: 323 LIK-----------LNFFDK------------------------VNHVLDEMIGSGFNPN 347
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F+ + ++ I D I + + P T LM+ K+ + + L
Sbjct: 348 VVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALE 407
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L + ++ V+ CK A + M R+ P+ + L+ G CKD
Sbjct: 408 EILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDG 467
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + EL LLE G K T N++I LC A + +A + EM+E G+P + ITYN
Sbjct: 468 KHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYN 527
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C G V RL ++M I PDIYT+N L++ C + K++ A K +
Sbjct: 528 ALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKAS 587
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL + +Y +++ K+ R ++ + F + +S N+I++ Q G A
Sbjct: 588 GLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAA 647
Query: 485 HDIVKTSKERGI 496
+++ K +GI
Sbjct: 648 LQLLENMKSKGI 659
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/498 (23%), Positives = 217/498 (43%), Gaps = 35/498 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ + Y A+I+ L+K N D +M P+ +N LI G C++G ++ A
Sbjct: 308 GVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGA 367
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE-------------------------- 98
L++ M P T L+ GFC + ++
Sbjct: 368 LKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHW 427
Query: 99 ---------VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
FR ++M RN P++ + LV G+ + +A EL R +E+
Sbjct: 428 LCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPAS 487
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
K+ N L++ L EA+ I+++M +RG + T++ + + + +
Sbjct: 488 KVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLRE 547
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
KRG++P TY L+ L G+ + + + L+SN+++Y ++++ +CK N
Sbjct: 548 EMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKAN 607
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
++ + E+ + + N + +N +I HC++ V +LL + G P+ T++
Sbjct: 608 RIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYS 667
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
S+I +C EDA + EM + G PN + Y LI C +G + + + +M +
Sbjct: 668 SLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISF 727
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
I P+ +T+ +I +C++ +EKA M G+ PD +Y+ L K+ D A
Sbjct: 728 NIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNA 787
Query: 450 KQTFLSMEQNGCNPDSYT 467
+ M G D T
Sbjct: 788 FKVCDQMATEGLPVDEIT 805
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 1/210 (0%)
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
P+L T N L+S K E K E+ ++ E G PD F+F ++I+ LC+ + E+A++
Sbjct: 207 PSLKTCNFLLSSLVKANEFEKCCEVFRVMSE-GACPDVFSFTNVINALCKGGKMENAIEL 265
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
+M + G+ PN +TYN +I LC G + + L +KM + P++ T+ ALI +
Sbjct: 266 FMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIK 325
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+N +K M+ G P+ ++ LI K G + A + M P S T
Sbjct: 326 LNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVT 385
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+++ + + E A + ++ G+S
Sbjct: 386 LYSLMQGFCKSDQIEHAENALEEILSSGLS 415
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 1/177 (0%)
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
++ +L G P T N ++ L +A+ FE + M E G P+ ++ +I +L
Sbjct: 195 DVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSE-GACPDVFSFTNVINAL 253
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C G + ++ LF KM+ ISP++ T+N +I C+ +++ A + M G++P+
Sbjct: 254 CKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNL 313
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+Y ALI LIK FD+ M +G NP+ N +++ + G E A I
Sbjct: 314 KTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKI 370
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 65/120 (54%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y A+I K +D A + +M P++FTY ++I G C++G +++A
Sbjct: 693 GFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKA 752
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M+ G P+V TY +L +GFC A + F+V + M + +E T +LVHG
Sbjct: 753 NNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 812
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
ISF I P+ Y +ID K +++ A +M PD TYN+L +G C+
Sbjct: 725 ISF-NIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAND 783
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGF 90
+D A ++ QM G + TYT L+ G+
Sbjct: 784 MDNAFKVCDQMATEGLPVDEITYTTLVHGW 813
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 227/488 (46%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
+ R YN ++ L + ID + +M D P+ FT N +++G C++G V EA V
Sbjct: 168 TLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYV 227
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
++ G + + +TYT LI G+C K V + M + NE + +L+HG
Sbjct: 228 SKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEA 287
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+A +L + E +++ L +EA + ++M ++ P T+
Sbjct: 288 RRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTY 347
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ L + ++ IL+ +++G+ P TY L++ K G L+ +
Sbjct: 348 TVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMES 407
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+ N +YN +I FC+ + +A + +M +R + PN+VT+N LI G CK+ ++
Sbjct: 408 NNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGS 467
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+LL ++ E G PD++T++ ID LC+ E+A + E G+ N + Y+ LI
Sbjct: 468 AYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLID 527
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
C +G V+ L KM + P+ T+N+LI +C+ ++A M+ + P
Sbjct: 528 GYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEP 587
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+Y+ LI L+K FD+A F M G +PD + + GR ++A ++
Sbjct: 588 AADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLI 647
Query: 489 KTSKERGI 496
+GI
Sbjct: 648 CKMNAKGI 655
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/471 (26%), Positives = 224/471 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+S T Y ++I ++ ++D A F M C + +Y LIHG C VDEA
Sbjct: 234 GLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEA 293
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L QM P V TYT++I C R E + + M E++ PN T L+
Sbjct: 294 LKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICS 353
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A ++L +E+ + + N L+ +++ A IL M P
Sbjct: 354 LCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPN 413
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + G ++++ +L ++R ++P TY +L+ K G + L+
Sbjct: 414 ARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLS 473
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + LV + +Y++ ID CK +++ A + ++++ I N V ++TLI G+CK
Sbjct: 474 LMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVG 533
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V R LL +L G P+ T+NS+ID C+ F++A + M++ + P TY
Sbjct: 534 KVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYT 593
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
ILI +L + ++ +F +M + PD++ + A I ++C +++ AE M
Sbjct: 594 ILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAK 653
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G+ PD Y+ I A + G D A M + GC P YT + +++ L
Sbjct: 654 GIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHL 704
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 218/490 (44%), Gaps = 6/490 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ R Y +I AL + A F++M+ C+P+ TY +LI +C D+A ++
Sbjct: 307 PTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKI 366
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ M G P+V TY LIDG+C A +L +M+ N PN T L+ G R
Sbjct: 367 LNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCR 426
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ HKA LL + +ER+ + N L++ A +L M + G +P+ T
Sbjct: 427 GKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWT 486
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + L + E + ++ ++G+K Y L++ K G+ +G L+ +
Sbjct: 487 YSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKML 546
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
V N +YN +ID +CK A + M RDI P T+ LI KD E
Sbjct: 547 SAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFD 606
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ ++ +L G PD F + + I C R +DA + +M G+ P+T+ Y + I
Sbjct: 607 QAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFI 666
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+ G + + + ++M P YT++ LI+ E + + S L+ G+
Sbjct: 667 DAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVA 726
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
++FS + ++ F M ++GC P++ T + L + G E AH +
Sbjct: 727 SNDFS------NCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRL 780
Query: 488 VKTSKERGIS 497
KE+G S
Sbjct: 781 FDHMKEKGQS 790
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/525 (24%), Positives = 222/525 (42%), Gaps = 39/525 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS YNA+ID K A M + C P+ TYN LI G CR + +A
Sbjct: 374 GLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKA 433
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M PNV TY ILI G C + +++L +M E + P+E T +
Sbjct: 434 MSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDT 493
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A L E+ +++ +TL+ S+ +L KM G +P
Sbjct: 494 LCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPN 553
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S T++ + + E ++D IKR ++P TY +L++ L K D E D+
Sbjct: 554 SITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLK---DDEFDQ--A 608
Query: 245 HVFKDRLVS-----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
H D+++S +V Y I +C + A + +M + I P+ + + I
Sbjct: 609 HDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDA 668
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH-------------------- 339
+ + + +L + E G +P +T++ +I L A
Sbjct: 669 YGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASN 728
Query: 340 ---------RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+E LD +M E G PN TY I LC +G + + RLF M+
Sbjct: 729 DFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKG 788
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
SP+ +N+L+ C++ +A + M+ P S L+ L G ++AK
Sbjct: 789 QSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAK 848
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ F S Q N D ++++ L+++G ++ D+ + +G
Sbjct: 849 RVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQG 893
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 184/403 (45%), Gaps = 15/403 (3%)
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCN 154
R+AE R+L I K + N V ++ + R +D K F+L +R N
Sbjct: 127 RIAENMRILMI-KSTDSSENALFVLEMLRSMNRRVDAFK-FKLTLR-----------CYN 173
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
LL LS M E ++ +M D P T + V ++ E + ++
Sbjct: 174 MLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQA 233
Query: 215 GVKPRFSTYL-LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G+ TY L++ D +L+ K L + V SY +I FC+ +D
Sbjct: 234 GLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEV-SYTNLIHGFCEARRVDE 292
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A ++ +M + + P + T+ +I C+ + + + E +P+ T+ +I
Sbjct: 293 ALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLIC 352
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
LC F+DA L+ M+E G+ P+ +TYN LI C G A +L + M+++ SP
Sbjct: 353 SLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSP 412
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
+ T+N LI FCR I KA ML L+P+ +Y+ LI K G A +
Sbjct: 413 NARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLL 472
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M ++G PD +T ++ ++TL ++G EEA + ++ KE+GI
Sbjct: 473 SLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGI 515
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/436 (19%), Positives = 161/436 (36%), Gaps = 64/436 (14%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y+ ID L K ++ A F+ + K + Y+ LI G C++G V +
Sbjct: 479 GLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDG 538
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M G PN TY LIDG+C K E +++IM +R++ P T L+
Sbjct: 539 RFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDN 598
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + +A ++ + + + ++ ++ +A ++ KM +G +P+
Sbjct: 599 LLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPD 658
Query: 185 SSTFD-------------------------------YTVTCLVTGL-------------- 199
+ + YT +CL+ L
Sbjct: 659 TMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSEL 718
Query: 200 -------------------DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
D T + + G P +TY + L K G
Sbjct: 719 SDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAH 778
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
R +H+ + N + YN ++ C C++ + A M + P+L + L+ G
Sbjct: 779 RLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGL 838
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ K + + L+C + D+ + +ID L + + D M G +
Sbjct: 839 YDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHP 898
Query: 361 ITYNILIRSLCAIGDV 376
TY++LI I ++
Sbjct: 899 KTYSMLIEGFDGIQEI 914
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 210/438 (47%), Gaps = 46/438 (10%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N ++ ALVK N +++M + +P+ T+NI I+G+C+ G +++A +++ ++
Sbjct: 169 NPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKA 228
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE---RNVCPNEATVRSLVHGVFR--- 127
G++PN+ TY LIDG C +++R I+KE +CPNE T +L+ G +
Sbjct: 229 WGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDEN 288
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
L AFE M+R+ L +V N+L+ LSNN
Sbjct: 289 VLAAKNAFEE----MQRQGLKPNIVTYNSLINGLSNNG---------------------- 322
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
L+E + D + G+KP T+ L+ K E + + +
Sbjct: 323 -------------KLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDI 369
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ LV N ++N +ID FCK MM+ + M D I PN+ T+N LI+G C++ V
Sbjct: 370 AEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNV 429
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
++LL + K D T+N +I C+ A L EM+ GV PN +TYN L
Sbjct: 430 RAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTL 489
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ C G++ +L++ +M+ + ++ T+N LI+ FC+ K+E A + ML GL
Sbjct: 490 MDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGL 549
Query: 427 RPDNFSYSALIKALIKSG 444
P+ +Y + +++ G
Sbjct: 550 NPNRTTYDVVRLEMLEKG 567
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 195/440 (44%), Gaps = 39/440 (8%)
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT 155
V+ VF L + +R C N LV L+ H A E+ R + CN
Sbjct: 112 VSSVFHSLLLGGDR-PCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNP 170
Query: 156 LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRG 215
LL L + E + ++M R P +TF+ + L LN+ +++ G
Sbjct: 171 LLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWG 230
Query: 216 VKPRFSTYLLLMEALYK---AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
P TY L++ K AG+ D L + +++ N ++N +ID FCK +
Sbjct: 231 FSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVL 290
Query: 273 RATEICREMRDRDIAPNLVTFNT-----------------------------------LI 297
A EM+ + + PN+VT+N+ LI
Sbjct: 291 AAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALI 350
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
+G CK + + R+L + E P+ TFN+MID C+A E+ + M++ G+
Sbjct: 351 NGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIF 410
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
PN TYN LI LC +V + +L +M+ + D+ T+N LI +C+ + KAEK
Sbjct: 411 PNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKL 470
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
ML +G++P++ +Y+ L+ G A + ME+ G + T N++++ +
Sbjct: 471 LGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCK 530
Query: 478 QGRFEEAHDIVKTSKERGIS 497
G+ E+A+ ++ E+G++
Sbjct: 531 TGKLEDANRLLNEMLEKGLN 550
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 201/445 (45%), Gaps = 39/445 (8%)
Query: 35 QMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAK 94
++S++ C P L+ + + E + K+M PN+ T+ I I+G C A
Sbjct: 162 KLSLNSCNP-------LLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAG 214
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCN 154
++ + V+E +K PN T +L+ G + K
Sbjct: 215 KLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGK--------------------- 253
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
+YR A AIL++M P TF+ + ++ + ++
Sbjct: 254 --MYR---------ADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQ 302
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G+KP TY L+ L G+ E + + L N+ ++N +I+ FCK M+ A
Sbjct: 303 GLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEA 362
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
++ ++ ++D+ PN +TFNT+I CK + + L +L+ G P+ T+N +I
Sbjct: 363 RKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAG 422
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LCR A L+EM + + + +TYNILI C G+ +++ +L +M + P+
Sbjct: 423 LCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPN 482
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
T+N L+ +C ++ A K M G R + +Y+ LIK K+G+ ++A +
Sbjct: 483 HVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLN 542
Query: 455 SMEQNGCNPDSYTSNLILETLVQQG 479
M + G NP+ T +++ ++++G
Sbjct: 543 EMLEKGLNPNRTTYDVVRLEMLEKG 567
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 145/328 (44%), Gaps = 43/328 (13%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ +N +ID K ++ A F++M KP+ TYN LI+G+ G +DEA+
Sbjct: 269 ICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAI 328
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L +M GLG PN+ T+ LI+GFC K + E ++ + + E+++ PN T
Sbjct: 329 ALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITF------- 381
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
NT++ M E A+ M D G P
Sbjct: 382 ----------------------------NTMIDAFCKAGMMEEGFALHNSMLDEGIFPNV 413
Query: 186 STFDYTVTCLVTGLDLNETC----GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
ST++ CL+ GL N+ +L+ +K TY +L+ K G + ++
Sbjct: 414 STYN----CLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEK 469
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + + N +YN ++D +C + A ++ +M N+VT+N LI G C
Sbjct: 470 LLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFC 529
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFN 329
K ++ LL +LE G P++ T++
Sbjct: 530 KTGKLEDANRLLNEMLEKGLNPNRTTYD 557
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 6/243 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ +NA+I+ K I A F ++ P+ T+N +I C+ G+++E
Sbjct: 337 LGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEE 396
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L M G PNV TY LI G C + V ++L M+ + + T L+
Sbjct: 397 GFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIG 456
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL--YRLSNNSMASEAAAILRKMGDRGY 181
G + +P KA +LL + + NTL+ Y + N A A + +M G
Sbjct: 457 GWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKA--ALKVRTQMEKEGK 514
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG--RDVEG 239
T++ + L + +L+ +++G+ P +TY ++ + + G D+EG
Sbjct: 515 RANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPDIEG 574
Query: 240 DRY 242
Y
Sbjct: 575 HLY 577
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/498 (26%), Positives = 229/498 (45%), Gaps = 8/498 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P ++N VI L K+ A F+ ++ +C PD T+NIL+ + + G V+EA
Sbjct: 60 GIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEA 119
Query: 65 LRLVKQMEGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
++ + M PNV TYT +I+G C ++ +L++M E CPN T LV
Sbjct: 120 FQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVE 179
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + K F LL R ++ NTLL L + EA +++ M G P
Sbjct: 180 GLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYP 239
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + ++ ++ +RG P Y ++ L + R + L
Sbjct: 240 TVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALL 299
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDR------ATEICREMRDRDIAPNLVTFNTLI 297
+ R V +V +Y+ +ID CK +D A EI M+ PN T+ +I
Sbjct: 300 KQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVI 359
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G C+ + + LL +++ PD +F+ +I LC++H + A M E
Sbjct: 360 EGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECK 419
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
PN + Y LI L G+V +++R+F+ M + P + T+N+++ C + +IE+A +
Sbjct: 420 PNPVAYAALIDGLSKGGEVDKAVRVFELM-VESFRPGVATYNSVLDGLCGVGRIEEAVRM 478
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
M+ PD SY ALI+ L + +EA + F ++E G + N+++ L +
Sbjct: 479 VEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCK 538
Query: 478 QGRFEEAHDIVKTSKERG 495
+ R +AH + E G
Sbjct: 539 KKRLSDAHGVANKLIEAG 556
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 230/483 (47%), Gaps = 11/483 (2%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N ++ LV++ A F++ ++C P+ FTY LIHG+C+ G +D+A L+ +M
Sbjct: 2 NCALNLLVRAGQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G P V + +I G C A R + + + P+ T LV + + +
Sbjct: 59 RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 134 AFELLIRF-MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
AF++ + L + T++ L + A +L M + G P T+ V
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L ++ +L +RG +P Y L+ L K+ R E + + +
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
V +YN +++ FC+ +DRA + + M +R P+++ +NT+I+G C+DA + + L
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHR------FEDALDCLSEMVEWGVPPNTITYNIL 366
L ++ PD T++++ID LC+ R E A + L M + G PPN TY ++
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I LC ++L L ++M + PD+ +F+ +I S C+ + ++ A K F M
Sbjct: 359 IEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSEREC 418
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+P+ +Y+ALI L K G D+A + F M ++ P T N +L+ L GR EEA
Sbjct: 419 KPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVR 477
Query: 487 IVK 489
+V+
Sbjct: 478 MVE 480
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 205/426 (48%), Gaps = 7/426 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y VI+ L K +D A M+ C P+ TY++L+ G+C+ G D+ L
Sbjct: 134 PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTL 193
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+++M G+ P+V Y L++G C ++R+ E ++++M P T SL+ R
Sbjct: 194 LQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCR 253
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+AF L+ ER + NT++ L ++ +A A+L++M +P+ T
Sbjct: 254 SKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVIT 313
Query: 188 FDYTVTCLV------TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+ + L L C IL+ + G P TY +++E L +A + +
Sbjct: 314 YSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALA 373
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + +V +++S++MVI CK + +D A +I M +R+ PN V + LI G
Sbjct: 374 LLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLS 433
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K EV K + +++E F+P T+NS++D LC R E+A+ + M+ P+
Sbjct: 434 KGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGA 492
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
+Y LIR LC + V + LFQ ++A + ++ +N L+ C+ ++ A +
Sbjct: 493 SYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKL 552
Query: 422 LTLGLR 427
+ G +
Sbjct: 553 IEAGYK 558
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 116/249 (46%), Gaps = 1/249 (0%)
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
++R V N +Y +I CK +D+A E+ EMRDR I P + N +I G CK
Sbjct: 23 EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFG 82
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM-VEWGVPPNTITYNIL 366
+ PD TFN ++D L ++ R E+A M PN +TY +
Sbjct: 83 DALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTV 142
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I LC G + R++ L M P++ T++ L++ C+ + +K M G
Sbjct: 143 INGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGF 202
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+PD Y+ L+ L KS R DEA + M ++GC P T N ++E + + + A
Sbjct: 203 QPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFR 262
Query: 487 IVKTSKERG 495
+++ ERG
Sbjct: 263 LIQVMSERG 271
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 73/127 (57%), Gaps = 7/127 (5%)
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+L+R+ G ++++LF++ +R P+ +T+ +LI C+ K+++A + M
Sbjct: 6 NLLVRA----GQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ P ++ +IK L K+GRF +A F ++ C PD T N++++ LV+ GR EE
Sbjct: 59 RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 484 AHDIVKT 490
A I ++
Sbjct: 119 AFQIFES 125
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 224/476 (47%)
Query: 22 KSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVY 81
+ I A F++M + C P ++YN +++ + G ++A ++ +M+ +VY
Sbjct: 167 RKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVY 226
Query: 82 TYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF 141
TYTI I FC R R+L M N ++V G + D +A EL
Sbjct: 227 TYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEM 286
Query: 142 MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
+E N L++ L E+ + K+ RG P TF+ + L L
Sbjct: 287 LECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSL 346
Query: 202 NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
+ +L + G++P TY ++ L + R VE + L+ + N +YN +
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
ID +CK M+ A I ++ + P+ T+ +L++G C+D + + + L G
Sbjct: 407 IDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGL 466
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
+P +N++I LC+ AL ++EM E G P+ TYN++I LC +G ++ +
Sbjct: 467 RPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANH 526
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
L PDI+T+N L+ +CR K++ A + M + G+ PD +Y+ L+ L
Sbjct: 527 LIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLC 586
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
K+ + +E + F +M + GC P+ T N I+E+L + EA D++ K +G++
Sbjct: 587 KTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLT 642
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 230/493 (46%), Gaps = 36/493 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ +N I L K S+D A +S + +PD TYN +I G+CR V EA
Sbjct: 325 GVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEA 384
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G+ PN +TY +IDG+C V + R+L+ + P+E T SLV+G
Sbjct: 385 EECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNG 444
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ DP +A + + + +V NTL+ L + A ++ +M ++G
Sbjct: 445 FCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKG---- 500
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
KP TY L++ L K G + + +
Sbjct: 501 -------------------------------CKPDIWTYNLIINGLCKMGCLSDANHLIG 529
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ +YN ++D +C+ +D A E+ M + + P+++T+NTL++G CK A
Sbjct: 530 DAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTA 589
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + E+ + E G P+ T+N++I+ LC + + +A+D L EM G+ P+ +++
Sbjct: 590 KSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFG 649
Query: 365 ILIRSLCAIGDVARSLRLFQKMQAD-RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI C +GD+ + LF+ M+ +S T+N +I +F ++ A + F M
Sbjct: 650 TLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKK 709
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G PDN++Y LI K+G ++ + L + G P T +L L + + +E
Sbjct: 710 NGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQE 769
Query: 484 AHDIVKTSKERGI 496
A I+ ++ I
Sbjct: 770 AVGIIHLMVQKDI 782
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 119/493 (24%), Positives = 234/493 (47%), Gaps = 1/493 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG + Y V+ + D A F +M PD T+N L+H +C+ G V E
Sbjct: 254 LGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLE 313
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ RL ++ G PN++T+ I I G C + R+L + + P+ T +++
Sbjct: 314 SERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVIC 373
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R +A E L + + N+++ M +A IL+ +G+ P
Sbjct: 374 GLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKP 433
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ V D ++ + + +G++P Y L++ L + G + + +
Sbjct: 434 DEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLM 493
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + + ++ +YN++I+ CK+ + A + + + P++ T+NTL+ G+C+
Sbjct: 494 NEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQ 553
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ EL+ + G PD T+N++++ LC+ + E+ ++ M E G PN ITY
Sbjct: 554 LKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITY 613
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM-L 422
N +I SLC V ++ L +M++ ++PD+ +F LI FC++ ++ A F M
Sbjct: 614 NTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEK 673
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ +Y+ +I A + A + F M++NGC+PD+YT ++++ + G
Sbjct: 674 QYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVN 733
Query: 483 EAHDIVKTSKERG 495
+ + + + E+G
Sbjct: 734 QGYKFLLENIEKG 746
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 205/475 (43%), Gaps = 38/475 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P YN VI L + + + A +M +P+ FTYN +I G C+ G+
Sbjct: 356 VSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGM 415
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V +A R++K G+ P+ +TY L++GFC
Sbjct: 416 VVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDG-------------------------- 449
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
DP +A + + + +V NTL+ L + A ++ +M ++G
Sbjct: 450 ---------DPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKG 500
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T++ + L L++ ++ I +G P TY L++ + +
Sbjct: 501 CKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAI 560
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+N ++ + +V +YN +++ CK + EI + M ++ APN++T+NT+I
Sbjct: 561 ELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESL 620
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM-VEWGVPPN 359
C +V++ +LL + G PD +F ++I C+ + A M ++ V
Sbjct: 621 CNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHT 680
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
T TYNI+I + ++ +LRLF +M+ + PD YT+ LI FC+ + + K
Sbjct: 681 TATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLL 740
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
+ G P ++ ++ L + EA M Q PD T N I E
Sbjct: 741 ENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD--TVNTIFEA 793
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 120/248 (48%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+V SYN +++ + ++A ++ M+D+ + ++ T+ I C+ + LL
Sbjct: 189 SVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLL 248
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ G + + +++ + A + EM+E + P+ T+N L+ +LC
Sbjct: 249 RNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKK 308
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G V S RLF K+ + P+++TFN IQ C+ +++A + + GLRPD +Y
Sbjct: 309 GFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTY 368
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ +I L + R EA++ M G P+ +T N I++ ++G +A+ I+K +
Sbjct: 369 NTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVF 428
Query: 494 RGISFKSF 501
+G F
Sbjct: 429 KGFKPDEF 436
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 126/277 (45%), Gaps = 5/277 (1%)
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV---FKDRLVSNVNSYNMVIDCFCKVN 269
K+G K TY +++ L G+ E + L+ + + L+ V Y + + +
Sbjct: 112 KQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGV--YVEAMRFYGRKG 169
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+ A + M + P++ ++N +++ + ++ ++ + + + + D +T+
Sbjct: 170 KIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYT 229
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
I CR R AL L M G N + Y ++ GD R+ LF +M
Sbjct: 230 IRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLEC 289
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ PD+ TFN L+ + C+ + ++E+ F +L G+ P+ F+++ I+ L K G D A
Sbjct: 290 CLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRA 349
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+ + + G PD T N ++ L ++ R EA +
Sbjct: 350 VRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEE 386
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 87/213 (40%), Gaps = 36/213 (16%)
Query: 320 GFKPDKFTFNSMIDCL------------------------------------CRAHRFED 343
GFK FT+ SM+ L R + ++
Sbjct: 114 GFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQE 173
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A+D M + P+ +YN ++ L G ++ +++ +M+ ++ D+YT+ I+
Sbjct: 174 AVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIK 233
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
SFCR + A + +M LG + +Y ++ + G D A++ F M + P
Sbjct: 234 SFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCP 293
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
D T N ++ L ++G E+ + +RG+
Sbjct: 294 DVTTFNKLVHALCKKGFVLESERLFDKVLKRGV 326
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/498 (26%), Positives = 229/498 (45%), Gaps = 8/498 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P ++N VI L K+ A F+ ++ +C PD T+NIL+ + + G V+EA
Sbjct: 60 GIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEA 119
Query: 65 LRLVKQMEGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
++ + M PNV TYT +I+G C ++ +L++M E CPN T LV
Sbjct: 120 FQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVE 179
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + K F LL R ++ NTLL L + EA +++ M G P
Sbjct: 180 GLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYP 239
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + ++ ++ +RG P Y ++ L + R + L
Sbjct: 240 TVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALL 299
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDR------ATEICREMRDRDIAPNLVTFNTLI 297
+ R V +V +Y+ +ID CK +D A EI M+ PN T+ +I
Sbjct: 300 KQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVI 359
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G C+ + + LL +++ PD +F+ +I LC++H + A M E
Sbjct: 360 EGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECK 419
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
PN + Y LI L G+V +++R+F+ M + P + T+N+++ C + +IE+A +
Sbjct: 420 PNPVAYAALIDGLSKGGEVDKAVRVFELM-VESFRPGVATYNSVLDGLCGVGRIEEAVRM 478
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
M+ PD SY ALI+ L + +EA + F ++E G + N+++ L +
Sbjct: 479 VEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCK 538
Query: 478 QGRFEEAHDIVKTSKERG 495
+ R +AH + E G
Sbjct: 539 KKRLSDAHGVANKLIEAG 556
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 230/483 (47%), Gaps = 11/483 (2%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N ++ LV++ A F++ ++C P+ FTY LIHG+C+ G +D+A L+ +M
Sbjct: 2 NCALNLLVRAGQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G P V + +I G C A R + + + P+ T LV + + +
Sbjct: 59 RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 134 AFELLIRF-MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
AF++ + L + T++ L + A +L M + G P T+ V
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L ++ +L +RG +P Y L+ L K+ R E + + +
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
V +YN +++ FC+ +DRA + + M +R P+++ +NT+I+G C+DA + + L
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHR------FEDALDCLSEMVEWGVPPNTITYNIL 366
L ++ PD T++++ID LC+ R E A + L M + G PPN TY ++
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I LC ++L L ++M + PD+ +F+ +I S C+ + ++ A K F M
Sbjct: 359 IEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSEREC 418
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+P+ +Y+ALI L K G D+A + F M ++ P T N +L+ L GR EEA
Sbjct: 419 KPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVR 477
Query: 487 IVK 489
+V+
Sbjct: 478 MVE 480
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 205/426 (48%), Gaps = 7/426 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y VI+ L K +D A M+ C P+ TY++L+ G+C+ G D+ L
Sbjct: 134 PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTL 193
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+++M G+ P+V Y L++G C ++R+ E ++++M P T SL+ R
Sbjct: 194 LQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCR 253
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+AF L+ ER + NT++ L ++ +A A+L++M +P+ T
Sbjct: 254 SKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVIT 313
Query: 188 FDYTVTCLV------TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+ + L L C IL+ + G P TY +++E L +A + +
Sbjct: 314 YSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALA 373
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + +V +++S++MVI CK + +D A +I M +R+ PN V + LI G
Sbjct: 374 LLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLS 433
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K EV K + +++E F+P T+NS++D LC R E+A+ + M+ P+
Sbjct: 434 KGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGA 492
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
+Y LIR LC + V + LFQ ++A + ++ +N L+ C+ ++ A +
Sbjct: 493 SYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKL 552
Query: 422 LTLGLR 427
+ G +
Sbjct: 553 IEAGYK 558
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 116/249 (46%), Gaps = 1/249 (0%)
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
++R V N +Y +I CK +D+A E+ EMRDR I P + N +I G CK
Sbjct: 23 EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFG 82
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM-VEWGVPPNTITYNIL 366
+ PD TFN ++D L ++ R E+A M PN +TY +
Sbjct: 83 DALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTV 142
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I LC G + R++ L M P++ T++ L++ C+ + +K M G
Sbjct: 143 INGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGF 202
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+PD Y+ L+ L KS R DEA + M ++GC P T N ++E + + + A
Sbjct: 203 QPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFR 262
Query: 487 IVKTSKERG 495
+++ ERG
Sbjct: 263 LIQVMSERG 271
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 73/127 (57%), Gaps = 7/127 (5%)
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+L+R+ G ++++LF++ +R P+ +T+ +LI C+ K+++A + M
Sbjct: 6 NLLVRA----GQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ P ++ +I+ L K+GRF +A F ++ C PD T N++++ LV+ GR EE
Sbjct: 59 RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 484 AHDIVKT 490
A I ++
Sbjct: 119 AFQIFES 125
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 144/537 (26%), Positives = 245/537 (45%), Gaps = 43/537 (8%)
Query: 2 SFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD----QCKPDRFTYNILIHGICR 57
SFLG +P R +NA++DA V++ A F +S + P+ TYNI++ +C
Sbjct: 112 SFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCV 171
Query: 58 IGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
G +D A+ L + G AP+ TY+ L+ GF R+ +L+ M V P+
Sbjct: 172 RGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVC 231
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKM 176
+L+ G FR + KA + + + + L N +L L M EA + +M
Sbjct: 232 YNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERM 291
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
+ P+ T+ + L D++ + IK G+ P Y L++ AGR
Sbjct: 292 VANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRV 351
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM-RDRDIAPNLVTFNT 295
E ++ + + + NV SYN+++ M+D+AT++ + +D ++P++VTF+T
Sbjct: 352 GEAWKFWDSMSVSG-IRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFST 410
Query: 296 LISGHCKDAEVHKTRELLVMLLECG----------------------------------- 320
+I G C+ +K+ ++L G
Sbjct: 411 MIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDS 470
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
FKP+ +N++I+ C+A +F DA+ S+M E P TITYN LI LC +
Sbjct: 471 FKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEAS 530
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
R ++M D+ T+ +LI+ CR KI+ A + +L GL+ D ++ LI L
Sbjct: 531 RFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGL 590
Query: 441 IKSGRFDEAKQTFLSM-EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+G+ DEA Q M E+N C P+ T N +++ + G F++A + E G+
Sbjct: 591 CSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGL 647
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 130/480 (27%), Positives = 225/480 (46%), Gaps = 38/480 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP+ YN ++D L K A +++M + +PD TY +IHG+CR VD A
Sbjct: 260 GASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSA 319
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R+ +M G P+V Y L+ GFC+A RV E ++ + M + N + ++ G
Sbjct: 320 ARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGI-RNVTSYNIMLKG 378
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+F KA +L + + L+ +V +T+++ L A+++ IL
Sbjct: 379 LFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILE--------- 429
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
E+ T +G +L+E FS Y ++ L K GR + +
Sbjct: 430 EART---------SGKELDE----------------FS-YSSMISGLCKDGRLDDAVKLY 463
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ D N + YN +I+ FC+ + A + +M + D +P +T+NTLI G CK
Sbjct: 464 EKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKA 523
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + +LE G D T+ S+I LCR + + AL +++++ G+ + + +
Sbjct: 524 EKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMH 583
Query: 364 NILIRSLCAIGDVARSLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
NILI LC+ G V + +L +M + + P++ T+N L+ F +KA + ++L
Sbjct: 584 NILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAIL 643
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
GL PD SY+ IK L R E Q M +G P + T N+++ +++ G +
Sbjct: 644 ENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQ 703
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 188/438 (42%), Gaps = 35/438 (7%)
Query: 50 ILIHGICRIGVVDEALRLVKQMEG-LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
+++ R + D AL +++ LG P V ++ L+D F A+R ++
Sbjct: 89 VVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDA--------- 139
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE 168
+A SL HG F R N +L L
Sbjct: 140 ------DAFFASLSHGAF----------------GRRIAPNLQTYNIMLRSLCVRGDLDR 177
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A + + RG P+ T+ ++ V L+ +LD V+P Y L+
Sbjct: 178 AVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLG 237
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
++ G + R + +D S N+ +YN+++D CK+ M A ++ M +
Sbjct: 238 GCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQ 297
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
P+++T+ T+I G C+ +V + +++ G PD +NS++ C A R +A
Sbjct: 298 PDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKF 357
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD-RISPDIYTFNALIQSFC 406
M G+ N +YNI+++ L G V ++ L++ ++ D +SPD+ TF+ +I C
Sbjct: 358 WDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLC 416
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
K+ + T G D FSYS++I L K GR D+A + + + + P+S+
Sbjct: 417 EKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSH 476
Query: 467 TSNLILETLVQQGRFEEA 484
N ++ Q +F +A
Sbjct: 477 IYNALINGFCQASKFSDA 494
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 102/234 (43%), Gaps = 40/234 (17%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIH------- 53
IS P++ +YNA+I+ +++ A + QM+ + C P TYN LIH
Sbjct: 466 ISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEK 525
Query: 54 ----------------------------GICRIGVVDEALRLVKQMEGLGYAPNVYTYTI 85
G+CR +D AL L Q+ G +V + I
Sbjct: 526 YLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNI 585
Query: 86 LIDGFCNAKRVAEVFRVLEIMKER-NVCPNEATVRSLVHGVFR--CLDPHKAFELLIRFM 142
LI G C+A +V E ++L MKE+ N CPN T +L+ G + C D KA L + +
Sbjct: 586 LIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFD--KAASLWMAIL 643
Query: 143 EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLV 196
E + + NT + L + + E +L +M G +P + T++ V ++
Sbjct: 644 ENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVI 697
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 228/485 (47%), Gaps = 4/485 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P T +N+++D L K+ + A+ M+ C+P TYN LI G+C+ VD A
Sbjct: 40 GVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRA 99
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LV + G+ P+V TY+IL DG C R+ E F +++ M PN T +L+ G
Sbjct: 100 KTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDG 159
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + KA+ELL + + + ++ L +A ++ M RG P
Sbjct: 160 LCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPS 219
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L ++E I + + Y+ L+ K+ R E + ++
Sbjct: 220 VITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD 279
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ R ++ YN ++D +CK +D + +M R PN+ T+N ++ G CK
Sbjct: 280 GI---RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHG 336
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V + L + G PD ++N +ID L +A + ++A L +M++ G+PP+ +TYN
Sbjct: 337 KVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYN 396
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ C ++ + + M + PD T+N LI + N++ A + ML
Sbjct: 397 TLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRN 456
Query: 425 G-LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G + +Y+ +I L K G +A M +G ++ T N+ ++ L ++GR +E
Sbjct: 457 GCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDE 516
Query: 484 AHDIV 488
A ++
Sbjct: 517 ASSLL 521
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 136/495 (27%), Positives = 237/495 (47%), Gaps = 8/495 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y+ + D L K ID A+ ++MS + C P+ TYN LI G+C+ ++A
Sbjct: 110 GFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKA 169
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ + G+ P+V TYTI++DG C R+ + +++E M +R P+ T +L+ G
Sbjct: 170 YELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEG 229
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R +A + + ++ L +L+ +S EA ++ G RG P
Sbjct: 230 LCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD--GIRG-TPY 286
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + L+E + + RG P TY ++M+ L K G+ E +L
Sbjct: 287 IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLE 346
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ V +V SYN++ID K + A ++ +M I P+ VT+NTL++ CK+
Sbjct: 347 SMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEE 406
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG-VPPNTITY 363
+L +++ G PD T+N++I L + +R DA + + EM+ G V TY
Sbjct: 407 RFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTY 466
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N +I LC G + ++L L M + + T+N I C+ ++++A M T
Sbjct: 467 NTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT 526
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM-EQNGCNPDSYTSNLILETLVQQGRFE 482
L D SY+ +I L K+ + D A + M G S+T NL+++ + R +
Sbjct: 527 L---RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLD 583
Query: 483 EAHDIVKTSKERGIS 497
EA +++ +RG S
Sbjct: 584 EALTLLELMVQRGCS 598
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 218/446 (48%), Gaps = 3/446 (0%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
PD FTYNILI G+C+ D+A ++ +M G P+ T+ ++DG C A + +
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
L +M ERN P+ T +L+ G+ + + +A L+ F+ + + + L L
Sbjct: 68 LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
EA ++++M G P T++ + L + +L+T + G P T
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT 187
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y ++++ L K GR + + + + K +V +Y +++ C+ +D A I +EM
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 247
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+D + + + +L++G+CK + +T+E ++ P +N+++D C+ R +
Sbjct: 248 SKDCTADALAYVSLVNGYCKSS---RTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLD 304
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+ + +M G PN TYNI++ LC G V + + M + PD+ ++N +I
Sbjct: 305 EIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIII 364
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+ +K ++A + M+ G+ PD +Y+ L+ K RFD+A +M + G +
Sbjct: 365 DGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVD 424
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIV 488
PD+ T N ++ L Q R +A++++
Sbjct: 425 PDNVTYNTLISGLSQTNRLGDAYELM 450
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/487 (26%), Positives = 223/487 (45%), Gaps = 8/487 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +PS Y A+++ L ++ +D A+ F++M C D Y L++G C+ EA
Sbjct: 215 GCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA 274
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++V + G P + Y L+DG+C R+ E+ V E M R PN T ++ G
Sbjct: 275 QKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDG 331
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF L + + N ++ L S EA +L +M G P+
Sbjct: 332 LCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPD 391
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + ++ GIL IK GV P TY L+ L + R + ++
Sbjct: 392 AVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMH 451
Query: 245 HVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ ++ +VS +YN +ID CK + +A + M + N VT+N I CK+
Sbjct: 452 EMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKE 511
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW-GVPPNTIT 362
+ + LL E D+ ++ ++I LC+A + + A EMV G+ + T
Sbjct: 512 GRLDEASSLLS---EMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHT 568
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+N+LI + + +L L + M SP + T+N +I C+++K++KA + F M
Sbjct: 569 FNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMA 628
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G+ + SY+ LI L GR EA Q M + C D + L QGR E
Sbjct: 629 VRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGE 688
Query: 483 EAHDIVK 489
EA ++++
Sbjct: 689 EAAELLR 695
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 173/355 (48%), Gaps = 7/355 (1%)
Query: 143 EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
ER+ N L+ L S +A+ +L +M DRG P++ TF+ + L
Sbjct: 3 ERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFE 62
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
+L +R +P TY L+ L K ++ V +V +Y+++
Sbjct: 63 RAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILA 122
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
D CK +D A E+ +EM PNLVT+NTLI G CK ++ K ELL L+ GF
Sbjct: 123 DGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFV 182
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
PD T+ ++D LC+ R + AL + M++ G P+ ITY L+ LC G V + +
Sbjct: 183 PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHI 242
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF--SYSALIKAL 440
F++M + + D + +L+ +C+ ++ ++A+K + G+R + Y+AL+
Sbjct: 243 FKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQK-----VVDGIRGTPYIDVYNALMDGY 297
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
K GR DE F M GC P+ T N++++ L + G+ +EA +++ G
Sbjct: 298 CKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAG 352
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 194/422 (45%), Gaps = 7/422 (1%)
Query: 77 APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFE 136
AP+V+TY ILIDG C A + + +L M +R V P+ T S++ G+ + +A
Sbjct: 7 APDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHS 66
Query: 137 LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLV 196
LL ER NTL+ L A ++ + G++P+ T+ L
Sbjct: 67 LLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLC 126
Query: 197 TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVN 256
++E ++ G P TY L++ L KA + + L + V +V
Sbjct: 127 KRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVV 186
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+Y +++D CK +D+A ++ M R P+++T+ L+ G C+ V + + +
Sbjct: 187 TYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 246
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV--PPNTITYNILIRSLCAIG 374
+ D + S+++ C++ R ++A + V G+ P YN L+ C G
Sbjct: 247 VSKDCTADALAYVSLVNGYCKSSRTKEA-----QKVVDGIRGTPYIDVYNALMDGYCKEG 301
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
+ +F+ M P+I T+N ++ C+ K+++A SM + G PD SY+
Sbjct: 302 RLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYN 361
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
+I L K+ + EA+Q M Q G PD+ T N ++ ++ RF++A I+K +
Sbjct: 362 IIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKA 421
Query: 495 GI 496
G+
Sbjct: 422 GV 423
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 122/244 (50%), Gaps = 35/244 (14%)
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M +R +AP++ T+N LI G CK ++ K E+L +++ G PD TFNS++D LC+A +
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 341 FEDALDCLS-----------------------------------EMVEWGVPPNTITYNI 365
FE A L+ E V G P+ +TY+I
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L LC G + + L ++M + +P++ T+N LI C+ +K EKA + ++++ G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
PD +Y+ ++ L K GR D+A + M + GC P T ++E L + GR +EAH
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240
Query: 486 DIVK 489
I K
Sbjct: 241 HIFK 244
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ G+ ++ +N +IDA K+ +D A + M C P TYN++I +C++
Sbjct: 557 VAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDK 616
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD+A L +M G + +YT+LI G C R E +VLE M + ++ R
Sbjct: 617 VDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRK 676
Query: 121 LVHGVFRCLDPHKAFELLIRFMER 144
L + +A ELL R +
Sbjct: 677 LYLALRGQGRGEEAAELLRRMTTK 700
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 239/488 (48%), Gaps = 3/488 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ A+ K N +L +QM D +TY+I I+ CR + AL +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P++ T + L++G+C++KR+++ +++ M E P+ T +L+HG+F
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+A L+ + ++R + T++ L A +L KM
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
F+ + L + + +G++P TY L+ L GR + R L+++
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ ++ NV ++N +ID F K + A ++ EM R I P+ +T+N LI+G C +
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ +++ ++ P+ T+N++I+ C+ R ED ++ EM + G+ NT+TY +I
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+ GD + +F++M ++R+ DI T++ L+ C K++ A F + +
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+ F Y+ +I+ + K+G+ EA F S+ PD T N ++ L + +EA D+
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDL 557
Query: 488 VKTSKERG 495
+ KE G
Sbjct: 558 FRKMKEDG 565
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/492 (25%), Positives = 241/492 (48%), Gaps = 3/492 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGIS Y+ I+ + + + LA +M +PD T + L++G C + +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ LV QM +GY P+ +T+T LI G + +E +++ M +R P+ T ++V+
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + D A LL + ++ NT++ L A + +M +G P
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + CL ++ +L +++ + P T+ L++A +K G+ VE ++
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + + +YN++I+ FC N +D A ++ + M +D PN+ T+NTLI+G CK
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V EL + + G + T+ ++I +A + A +MV VP + +TY
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+IL+ LC+ G + +L +F+ +Q + +I+ +N +I+ C+ K+ +A F S
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCS--- 528
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
L ++PD +Y+ +I L EA F M+++G P+S T N ++ ++
Sbjct: 529 LSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAA 588
Query: 484 AHDIVKTSKERG 495
+ +++K + G
Sbjct: 589 SAELIKEMRSSG 600
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 231/494 (46%), Gaps = 49/494 (9%)
Query: 2 SFLGISPSTR--LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
SF S R L N + D + +++DL F M + P +N L+ + ++
Sbjct: 42 SFASASGDYREILRNRLSDIIKVDDAVDL----FGDMVKSRPFPSIVEFNKLLSAVAKMN 97
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+ + L +QM+ LG + ++YTY+I I+ FC +++ VL M + P+ T+
Sbjct: 98 KFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS 157
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
SL++G C++ S+A A++ +M +
Sbjct: 158 SLLNG---------------------------YCHS--------KRISDAVALVDQMVEM 182
Query: 180 GYLPESSTFDYTVTCLVTGLDLN----ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
GY P++ TF T L+ GL L+ E ++D ++RG +P TY ++ L K G
Sbjct: 183 GYKPDTFTF----TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
LN + R+ +NV +N +ID CK ++ A ++ EM + I PN+VT+N+
Sbjct: 239 IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS 298
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
LI+ C LL +LE P+ TFN++ID + + +A EM++
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ P+TITYN+LI C + + ++F+ M + P+I T+N LI FC+ ++E
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV 418
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ F M GL + +Y+ +I+ ++G D A+ F M N D T +++L L
Sbjct: 419 ELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478
Query: 476 VQQGRFEEAHDIVK 489
G+ + A I K
Sbjct: 479 CSYGKLDTALVIFK 492
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 192/419 (45%), Gaps = 7/419 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y V++ L K IDLA +M + K + +N +I +C+ V+ A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +ME G PNV TY LI+ CN R ++ R+L M E+ + PN T +L+
Sbjct: 278 VDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDA 337
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ +A +L ++R + N L+ ++ EA + + M + LP
Sbjct: 338 FFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + + + +RG+ TY +++ ++AG
Sbjct: 398 IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK 457
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +R+ +++ +Y++++ C +D A I + ++ ++ N+ +NT+I G CK
Sbjct: 458 QMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAG 517
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V + +L L KPD T+N+MI LC ++A D +M E G PN+ TYN
Sbjct: 518 KVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYN 574
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LIR+ D A S L ++M++ D T I M + +K+F +ML+
Sbjct: 575 TLIRANLRDCDRAASAELIKEMRSSGFVGDAST----ISLVTNMLHDGRLDKSFLNMLS 629
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 134/240 (55%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+Y++ I+CFC+ + + A + +M P++VT ++L++G+C + L+ +
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
+E G+KPD FTF ++I L ++ +A+ + +MV+ G P+ +TY ++ LC GD+
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+L L KM+A RI ++ FN +I S C+ +E A F M T G+RP+ +Y++L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
I L GR+ +A + +M + NP+ T N +++ ++G+ EA + + +R I
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 162/369 (43%), Gaps = 45/369 (12%)
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLS-------NNSMASEAAAILRKMGDRGYLPESST 187
FEL+I E+ Q L + LY S S S A A+L KM GY P+ T
Sbjct: 99 FELVISLGEQ---MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 155
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ +++ ++D ++ G KP T+ L+ L+ + E
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE--------- 206
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
A + +M R P+LVT+ T+++G CK ++
Sbjct: 207 --------------------------AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
LL + K + FN++ID LC+ E A+D +EM G+ PN +TYN LI
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G + + RL M +I+P++ TFNALI +F + K+ +AEK M+ +
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD +Y+ LI R DEAKQ F M C P+ T N ++ + R E+ ++
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 488 VKTSKERGI 496
+ +RG+
Sbjct: 421 FREMSQRGL 429
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ +DA+D +MV+ P+ + +N L+ ++ + + L ++MQ IS D+YT++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
I FCR +++ A M+ LG PD + S+L+ S R +A M +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G PD++T ++ L + EA +V +RG
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 55/137 (40%)
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
IL L I V ++ LF M R P I FN L+ + +MNK E M TL
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ D ++YS I + + A M + G PD T + +L R +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 485 HDIVKTSKERGISFKSF 501
+V E G +F
Sbjct: 173 VALVDQMVEMGYKPDTF 189
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 136/493 (27%), Positives = 231/493 (46%), Gaps = 37/493 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ +YNAVI+AL K ++ A +++ + PD FTY +I G CR +D A
Sbjct: 380 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 439
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ QM G PN TY+ LI+G C++ RV E F ++ M ++HG
Sbjct: 440 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM--------------ILHG 485
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ L C + L + +A + M ++G P
Sbjct: 486 I---------------------LPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPN 524
Query: 185 SSTFDYTVTCL-VTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ ++ L V+GL L G+ + GV P TY L+ L + R L
Sbjct: 525 VYTYTALISGLCVSGL-LKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVL 583
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + ++ L +N+ +YN +I +C + +A + M R + NLVT+NT+I G+C
Sbjct: 584 NLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDS 643
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+L ++ + G KPD++++ +I C+ + E A +EMV+ G+ PN +TY
Sbjct: 644 GNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTY 703
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI C + + L + M+ P++ T+N LI + N AE+ M+
Sbjct: 704 TALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIE 763
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ P+ +Y+A+I L K+G A + F M + GC P+ T + ++ L Q+G+ EE
Sbjct: 764 EGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEE 823
Query: 484 AHDIVKTSKERGI 496
A ++ + G+
Sbjct: 824 AENLFAELERHGL 836
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 194/436 (44%), Gaps = 35/436 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ I AL + A+ F M C+P+ +TY LI G+C G++ A
Sbjct: 485 GILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVA 544
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +M G PN TY LI+ +R+ F VL +M + N T ++ G
Sbjct: 545 IGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKG 604
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
DP KA ++ ++R + NT++ ++ + A IL M D G P+
Sbjct: 605 YCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPD 664
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+++ T L+ G C I ME+ + N
Sbjct: 665 ----EWSYTELICGF-----CKISK-----------------MESAFG---------LFN 689
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D L N +Y +ID +CK +D AT + M+ PN+ T+N LI G K
Sbjct: 690 EMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQN 749
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
EL +++E G P+ T+ +MID LC+ AL+ ++M+E G PN +TY+
Sbjct: 750 NFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYS 809
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LIR+L G V + LF +++ + PD T+ +I+++ K+E A M+
Sbjct: 810 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 869
Query: 425 GLRPDNFSYSALIKAL 440
G +P ++Y LIK L
Sbjct: 870 GCQPTLWTYGVLIKGL 885
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/504 (23%), Positives = 211/504 (41%), Gaps = 59/504 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+T YNA+I+ LV++ I A++ M + + TYN +I G C +G +A
Sbjct: 555 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKA 614
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ M G++ N+ TY +I G+C++ R+L++M++ P+E + L+ G
Sbjct: 615 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 674
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ AF L +M D G P
Sbjct: 675 FCKISKMESAFGL-----------------------------------FNEMVDDGLCPN 699
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L+ +L+ + G +P TY +L+ L K +
Sbjct: 700 EVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK 759
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ + NV +Y +ID CK A E+ +M ++ PNL+T+++LI ++
Sbjct: 760 VMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEG 819
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V + L L G PD+ T+ MI+ + + E A + L M++ G P TY
Sbjct: 820 KVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYG 879
Query: 365 ILIRS-----------LCAIGDVARSLRL-FQKMQADRISP------------DIYTFNA 400
+LI+ L A+ DV + +Q D +S + NA
Sbjct: 880 VLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNA 939
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
L+ + + +A + SM++ GL PD +Y++L+ +L++ D A F M G
Sbjct: 940 LVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQG 999
Query: 461 CNPDSYTSNLILETLVQQGRFEEA 484
C ++ L Q R +EA
Sbjct: 1000 CEVHLNGYKELICALCQLHRRKEA 1023
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 187/443 (42%), Gaps = 11/443 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S + YN +I S + A M CKPD ++Y LI G C+I ++ A
Sbjct: 625 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 684
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +M G PN TYT LIDG+C +++ +LE MK PN T L+HG
Sbjct: 685 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 744
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + A EL +E + ++ L N S A + KM ++G LP
Sbjct: 745 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 804
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L + E + + G+ P TY+ ++EA +G+ +L
Sbjct: 805 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 864
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K + +Y ++I ++ R D+ PN +F D
Sbjct: 865 RMIKAGCQPTLWTYGVLIKGLKNEYLLADQ----RLAALPDVVPN-CSFGY----QTTDQ 915
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L+ G N+++ L A R+ +A + L M+ G+ P+ YN
Sbjct: 916 DAVSVMSAKLAELDPGLSVQ--VQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYN 973
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ SL + +V ++ +F+ M + + LI + C++++ ++A F +ML
Sbjct: 974 SLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMR 1033
Query: 425 GLRPDNFSYSALIKALIKSGRFD 447
PD+ + LI L++ G D
Sbjct: 1034 TWNPDDVVQAVLIDGLLRDGYKD 1056
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 121/255 (47%)
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+L+ + + L + +Y+ ++ ++ M + M + PNL+ +N +I+ C
Sbjct: 337 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 396
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
KD V ++ + E PD FT+ SMI CR H + AL ++M + G PNT+
Sbjct: 397 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 456
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY+ LI LC G V + L ++M I P +T I + C M E A + F M
Sbjct: 457 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 516
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G P+ ++Y+ALI L SG A F M ++G P++ T N ++ LV+ R
Sbjct: 517 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 576
Query: 482 EEAHDIVKTSKERGI 496
+ A ++ G+
Sbjct: 577 KYAFVVLNLMGRNGL 591
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 146/298 (48%), Gaps = 2/298 (0%)
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE-GDRYLNHVFKDRLVSNVNSYN 259
+ T LD + G++ Y L+ L + G DRY + + + + N+ YN
Sbjct: 331 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRY-HRMLSEGVQPNLLIYN 389
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
VI+ CK + A I +++ + +++P+ T+ ++I GHC+ ++ ++ + +
Sbjct: 390 AVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 449
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G +P+ T++++I+ LC + R +A D + EM+ G+ P T I +LC +G +
Sbjct: 450 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 509
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
RLF M+ P++YT+ ALI C ++ A F M G+ P+ +Y+ALI
Sbjct: 510 WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 569
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
L+++ R A M +NG + T N +++ G ++A ++ +RG S
Sbjct: 570 LVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS 627
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 135/505 (26%), Positives = 244/505 (48%), Gaps = 25/505 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+S + YN +I + ++++ F++M ++C P+ TYN +I C++ +DEA
Sbjct: 198 GVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEA 257
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L++ M G PN+ TY ++I+G C R+ E VL M + P+ T +LV+G
Sbjct: 258 FKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNG 317
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + H+A +L M R L +V T L+ + + A +M RG P
Sbjct: 318 YCKVGNFHQAL-VLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRP 376
Query: 184 ESSTFDYTVTCLVTGLD----LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
T+ T L+ G ++E I D I+ G P TY L+ +GR E
Sbjct: 377 NGVTY----TSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEA 432
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L + L +V SY+ +I FC+ +DRA ++ EM ++ ++P+ +T+++LI G
Sbjct: 433 IGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQG 492
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
C+ +++ +L +L PD+FT+ S+I+ C+ +AL+ EM++ G P+
Sbjct: 493 LCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPD 552
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN---------------ALIQS 404
T+TYN+LI L + RL K+ D P+ T++ ALI+
Sbjct: 553 TVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKG 612
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
FC + +A++ F SM+ +P+ Y+ +I + G +A + + M G P
Sbjct: 613 FCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPH 672
Query: 465 SYTSNLILETLVQQGRFEEAHDIVK 489
+ T +++ L +G E+ + +++
Sbjct: 673 TVTIIALVKALYSEGMDEQLNLVIR 697
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/501 (25%), Positives = 226/501 (45%), Gaps = 16/501 (3%)
Query: 5 GISPSTRLYNAVIDALVK-SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P YNA++D++V+ + A +++M + F+YNILI G C G ++
Sbjct: 162 GFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEM 221
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
LR ++ME PNV TY +I +C KR+ E F++L M + PN T +++
Sbjct: 222 GLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVIN 281
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R + +L + + NTL+ +A + +M G P
Sbjct: 282 GLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPP 341
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ + + +LN D RG++P TY L+ + G E R
Sbjct: 342 DVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIW 401
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + + +YN +++ C M+ A + R M + ++P++V+++T+I+G C+
Sbjct: 402 DEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRY 461
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E+ + ++ ++E G PD T++S+I LC R +A D EM+ + P+ TY
Sbjct: 462 QELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTY 521
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI C GD+ +L L +M PD T+N LI + + +A++ +
Sbjct: 522 TSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFY 581
Query: 424 LGLRPDNFSYSALIK-----------ALIKS----GRFDEAKQTFLSMEQNGCNPDSYTS 468
P+ +Y LI+ ALIK G +EA Q F SM + P+
Sbjct: 582 DESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVY 641
Query: 469 NLILETLVQQGRFEEAHDIVK 489
N+I+ + G +AH + K
Sbjct: 642 NVIIHGHCRDGNVHKAHKLYK 662
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 224/482 (46%), Gaps = 52/482 (10%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMS---VDQCK-----PDRFTYNILIHGI--CRIGVVDE 63
+AV D +VKS S YL F + + VD K P +YN ++ I CR V+
Sbjct: 132 SAVFDLVVKSCS----YLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVI-F 186
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLV 122
A ++ ++M G + NV++Y ILI GFC A + R E M ERN C PN T +++
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEM-ERNRCLPNVVTYNTVI 245
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ +AF+LL R MG G
Sbjct: 246 GAYCKLKRIDEAFKLL-----------------------------------RSMGLEGLE 270
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T++ + L + ET G+L ++G P TY L+ K G +
Sbjct: 271 PNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVL 330
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + ++ L +V +Y +I+ CK ++RA E +M R + PN VT+ +LI+G +
Sbjct: 331 HSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQ 390
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + ++ GF P T+N++++ C + R E+A+ L M G+ P+ ++
Sbjct: 391 KGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVS 450
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y+ +I C ++ R+ ++ +M +SPD T+++LIQ C ++ +A F ML
Sbjct: 451 YSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEML 510
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
L PD F+Y++LI K G +EA M + G PD+ T N+++ L +Q R
Sbjct: 511 NKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTR 570
Query: 483 EA 484
EA
Sbjct: 571 EA 572
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 149/286 (52%)
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
I GV +Y +L+ AG G R+ + ++R + NV +YN VI +CK+ +
Sbjct: 195 IASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRI 254
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
D A ++ R M + PNL+T+N +I+G C+ + +T +L + GF PD T+N++
Sbjct: 255 DEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTL 314
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
++ C+ F AL SEM+ G+PP+ +TY LI ++C G++ R++ F +M +
Sbjct: 315 VNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGL 374
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
P+ T+ +LI F + +++A + + M+ G P +Y+AL+ SGR +EA
Sbjct: 375 RPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIG 434
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
ME G +PD + + I+ + + A + E+G+S
Sbjct: 435 LLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVS 480
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 3/241 (1%)
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG--HCKDAEVHKTRELLVM 315
+++V+ +N +++A I + P ++++N ++ C+ + + M
Sbjct: 135 FDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREM 194
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
+ G + F++N +I C A E L EM PN +TYN +I + C +
Sbjct: 195 I-ASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKR 253
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+ + +L + M + + P++ T+N +I CR+ +IE+ M G PD +Y+
Sbjct: 254 IDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNT 313
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
L+ K G F +A M +NG PD T ++ T+ + G A + RG
Sbjct: 314 LVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRG 373
Query: 496 I 496
+
Sbjct: 374 L 374
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 125/299 (41%), Gaps = 54/299 (18%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YNA+++ S ++ A + M PD +Y+ +I G CR +D A
Sbjct: 408 GFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRA 467
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +M G +P+ TY+ LI G C +R+ E + + M +++ P+E T SL++G
Sbjct: 468 FQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLING 527
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D ++A L +++ L + N L+ L+ + EA +L K+ +P
Sbjct: 528 YCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPN 587
Query: 185 SSTFDY-----------TVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTY------ 223
T+D +V L+ G +NE + ++ IKR KP + Y
Sbjct: 588 GITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHG 647
Query: 224 -----------------------------LLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
+ L++ALY G D + LN V +D L S
Sbjct: 648 HCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQ----LNLVIRDILRS 702
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAI-GDVARSLRLFQKMQADRISPDIYTFNA 400
E AL+ + G P ++YN ++ S+ V + +++++M A +S +++++N
Sbjct: 149 EKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNI 208
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI+ FC +E + F M P+ +Y+ +I A K R DEA + SM G
Sbjct: 209 LIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEG 268
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
P+ T N+++ L + GR EE ++ +G +
Sbjct: 269 LEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFA 305
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 228/472 (48%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P +N ++D+ K A ++ + +PD T NILI+ C +G +
Sbjct: 56 TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++ ++ GY P+ T LI G C +V + + + + N+ + +L++GV
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVC 175
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ D A +LL + R ++ +T++ L + SEA + +M +G +
Sbjct: 176 KIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 235
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L E G+L+ + + + P TY +L++AL K G+ E L +
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K + +V +Y+ ++D + V + +A + M + P++ T+ LI+G CK+ V
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMV 355
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ L + + P T++S+ID LC++ R D + EM + G P N ITY+ L
Sbjct: 356 DEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSL 415
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I LC G + R++ LF KM+ I P+ +TF L+ C+ +++ A++ F +LT G
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 475
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+ ++Y+ +I K G +EA ME NGC PD+ T +I+ L ++
Sbjct: 476 HLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKK 527
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 160/331 (48%)
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
++L K+ RGY P++ T + + L + + D + +G + +Y L+ +
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGV 174
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
K G + L + NV Y+ +ID CK ++ A + EM + I+ ++
Sbjct: 175 CKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 234
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
VT++TLI G C + ++ + LL ++ P+ +T+N ++D LC+ + ++A L+
Sbjct: 235 VTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M++ V P+ ITY+ L+ + +V ++ +F M ++PD++T+ LI FC+
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKM 354
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+++A F M + P +YS+LI L KSGR M G + T +
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSS 414
Query: 471 ILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+++ L + G + A + K++GI +F
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQGIRPNTF 445
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 125/242 (51%), Gaps = 2/242 (0%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+ N++I+CFC + + I ++ R P+ +TF TLI+G C +V+K L
Sbjct: 963 TLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKL 1022
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
L GF+ ++ ++ ++I+ +C+ A+ L ++ P+ + YN +I +LC V
Sbjct: 1023 LAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLV 1082
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+++ LF +M IS D+ T+N LI FC + K+++A M+ + P+ +Y+ L
Sbjct: 1083 SKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNIL 1142
Query: 437 IKALIKSGR--FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
+ AL K G+ DE+ ME NGC ++ T +I+ L ++ ++ ++ R
Sbjct: 1143 VDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIAR 1202
Query: 495 GI 496
G+
Sbjct: 1203 GL 1204
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%)
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + + + I P+L T N LI+ C ++ +L +L+ G+ PD TF ++I+
Sbjct: 945 AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
LC + AL +++ G N ++Y LI +C IGD +++L +K+ P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
D+ +N +I + C+ + KA FF M G+ D +Y+ LI G+ EA
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGR 480
M NP+ T N++++ L ++G+
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGK 1151
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 125/272 (45%), Gaps = 4/272 (1%)
Query: 159 RLSNNSMA--SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
R+ +N M S A ++ ++ +G P+ T + + C + IL +KRG
Sbjct: 933 RIPHNPMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGY 992
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
P T+ L+ L G+ + + + + N SY +I+ CK+ A +
Sbjct: 993 HPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIK 1052
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
+ R++ R P++V +NT+I CK V K L + G D T+N++I C
Sbjct: 1053 LLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFC 1112
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD--VARSLRLFQKMQADRISPD 394
+ ++A+ L++MV + PN TYNIL+ +LC G + SL + KM+ + +
Sbjct: 1113 IVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKAN 1172
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
TF +I + ++ +K EK M+ GL
Sbjct: 1173 AVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 123/255 (48%), Gaps = 2/255 (0%)
Query: 34 QQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNA 93
++ + +PD FT NILI+ C +G + ++ ++ GY P+ T+T LI+G C
Sbjct: 950 HRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLK 1009
Query: 94 KRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC 153
+V + + + + N+ + +L++GV + D A +LL + R ++
Sbjct: 1010 GQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMY 1069
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
NT++ L + + S+A + +M +G + T++ + L E G+L+ +
Sbjct: 1070 NTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVL 1129
Query: 214 RGVKPRFSTYLLLMEALYKAGRDV--EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+ + P TY +L++AL K G+D+ E L+ + + +N ++ ++I + +
Sbjct: 1130 KTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDEN 1189
Query: 272 DRATEICREMRDRDI 286
D+ ++ EM R +
Sbjct: 1190 DKVEKLLHEMIARGL 1204
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S +G++P Y +I+ K+ +D A F++M P TY+ LI G+C+ G
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ L+ +M G NV TY+ LIDG C + + MK++ + PN T
Sbjct: 390 IPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTI 449
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G+ + A E+ + + N ++ + EA +L KM D G
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNG 509
Query: 181 YLPESSTFDYTVTCL 195
+P++ TF+ + L
Sbjct: 510 CIPDAVTFEIIIIAL 524
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P +YN +IDAL K + AY F +M+V D TYN LI+G C +G + EA+ L
Sbjct: 1064 PDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGL 1123
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKR--VAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ +M PNV TY IL+D C + + E +L M++ N T ++ +
Sbjct: 1124 LNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183
Query: 126 FRCLDPHKAFELLIRFMER 144
F + K +LL + R
Sbjct: 1184 FEKDENDKVEKLLHEMIAR 1202
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 116/260 (44%), Gaps = 2/260 (0%)
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L ++E G P+++T ILI+ FC+ ++ F +L + +R P+ T +L++
Sbjct: 945 AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ +KA + + + ++ TL+ + A +LRK+ R P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + L +++ G+ +G+ TY L+ G+ E L
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCK--VNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
N + + NV +YN+++D CK +++D + + +M D N VTF +IS
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184
Query: 302 KDAEVHKTRELLVMLLECGF 321
+ E K +LL ++ G
Sbjct: 1185 EKDENDKVEKLLHEMIARGL 1204
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 73/175 (41%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P FN ++D + + A+ + G+ P+ IT NILI C +G + +
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
K+ PD T N LI+ C +++KA +L G + + SY LI + K
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCK 176
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G A + ++ P+ + I++ L + EA+ + +GIS
Sbjct: 177 IGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGIS 231
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 98/214 (45%), Gaps = 2/214 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T + +I+ L ++ A ++ + ++ +Y LI+G+C+IG A
Sbjct: 991 GYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAA 1050
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+++++G P+V Y +ID C + V++ + + M + + + T +L++G
Sbjct: 1051 IKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYG 1110
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL--SNNSMASEAAAILRKMGDRGYL 182
+A LL + + + N L+ L + E+ ++L KM D G
Sbjct: 1111 FCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCK 1170
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
+ TF+ ++ L + ++ +L I RG+
Sbjct: 1171 ANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 60/143 (41%)
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G+ P+ T NILI C +G + + + K+ PD TF LI C ++ KA
Sbjct: 956 GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
+L G + + SY LI + K G A + ++ PD N I++
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDA 1075
Query: 475 LVQQGRFEEAHDIVKTSKERGIS 497
L + +A+ + +GIS
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVKGIS 1098
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
+I +V ++ F +M R +P I FN ++ SF +M A + G++PD
Sbjct: 36 SIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLI 95
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA---HD 486
+ + LI G+ + + G PD+ T N +++ L +G+ ++A HD
Sbjct: 96 TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHD 153
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/490 (25%), Positives = 233/490 (47%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ ++ ++ + ++QM + +T NILI+ C + + A +
Sbjct: 52 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 111
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ + LGY P+ T+T LI G C ++ E ++ + M P+ T +L++G+ +
Sbjct: 112 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 171
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ A L +R +V +T++ L + +EA ++ M +G P + T
Sbjct: 172 VGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFT 231
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + L E + I R + P T+ L++AL K G V+ ++ +
Sbjct: 232 YSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMI 291
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ L +V +YN ++D C + M + + M + P+++++ TLI+G+CK +
Sbjct: 292 QSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMD 351
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
K L + + G PD T+N++I LC R DA+ EMV +G P+ +TY IL
Sbjct: 352 KAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILF 411
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC +A ++ L + ++ + PDI+ ++ ++ CR ++E A F + + GL
Sbjct: 412 DYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLH 471
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD +Y+ +I L + G EA + F M++NGC+P++ T NLI ++ A +
Sbjct: 472 PDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQL 531
Query: 488 VKTSKERGIS 497
+ RG S
Sbjct: 532 FQEMLSRGFS 541
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/487 (25%), Positives = 220/487 (45%), Gaps = 39/487 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG PST + +I L I A F +M+ + +PD TY LI+G+C++G
Sbjct: 118 LGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTST 177
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+R ++ ME P V Y+ +ID C +++ E + M + + PN T SL+H
Sbjct: 178 AIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIH 237
Query: 124 GVFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
G+ C+ H +A L + R+ + +L NTL+ L M +A ++ M
Sbjct: 238 GL--CILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDL 295
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P+ T++ + ++ +T + DT +++G P
Sbjct: 296 KPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVP----------------------- 332
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+V SY +I+ +CK+ +MD+A + EM + + P+ VT+NTLI G C
Sbjct: 333 ------------SVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLC 380
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ L ++ G PD T+ + D LC+ HR +A+ L + + P+
Sbjct: 381 HVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIH 440
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y+I++ +C G++ + LF K+ + + PD+ T+ +I C+ + +A K F M
Sbjct: 441 IYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM 500
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G P+ +Y+ + + +++ A Q F M G + D T+ L++E L G
Sbjct: 501 DENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLD 560
Query: 482 EEAHDIV 488
+ I+
Sbjct: 561 QSVKQIL 567
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 163/355 (45%), Gaps = 8/355 (2%)
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A L R + P + + LL ++ S ++ ++M G +P ++ YT+
Sbjct: 38 ALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFG-IPHNT---YTLN 93
Query: 194 CLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
L+ L +L +K G +P +T+ L+ L G+ E + + + +
Sbjct: 94 ILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGE 153
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
+V +Y +I+ CKV A R M R+ P +V ++T+I CKD ++ +
Sbjct: 154 GFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEA 213
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
L +L G P+ FT++S+I LC +++A+ M+ + P+ +T+N L+ +
Sbjct: 214 LSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDA 273
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
LC G V ++ + M + PD+ T+N+L+ C +++ K F +M+ G P
Sbjct: 274 LCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPS 333
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
SY+ LI K D+A F M Q G PD+ T N ++ L GR +A
Sbjct: 334 VISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDA 388
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 35/256 (13%)
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
VN +D A + M P++V F+ L++ + L + G + +T
Sbjct: 32 VNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYT 91
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
N +I+ C +R A L ++++ G P+T T+ LIR LC G + +L+LF KM
Sbjct: 92 LNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMT 151
Query: 388 ADRISPDIYTFNALIQSFCRMN-----------------------------------KIE 412
+ PD+ T+ LI C++ ++
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLT 211
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
+A F ML G+ P+NF+YS+LI L G + EA + F +M PD T N ++
Sbjct: 212 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLV 271
Query: 473 ETLVQQGRFEEAHDIV 488
+ L ++G +AH +V
Sbjct: 272 DALCKEGMVVKAHYVV 287
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 79/179 (44%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P F+ ++ + R + L +M +G+P NT T NILI S C + + + +
Sbjct: 52 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 111
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
+ P TF LI+ C KI +A + F M G +PD +Y LI L K
Sbjct: 112 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 171
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
G A + SMEQ C P + I+++L + + EA + +GIS +F
Sbjct: 172 VGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNF 230
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 77/153 (50%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+DAL + M+ PP+ + ++ L+ S+ + + L L+++M + I + YT N L
Sbjct: 36 DDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNIL 95
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I SFC +N++ A +L LG +P +++ LI+ L G+ EA Q F M G
Sbjct: 96 INSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGF 155
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
PD T ++ L + G A +++ ++R
Sbjct: 156 QPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQR 188
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 227/497 (45%), Gaps = 45/497 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SPS YN VI L + ++ A F++M +PD TYN LI G ++G++ A
Sbjct: 246 GLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGA 305
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + ++M+ G P+V TY LI+ FC +R+ + F L MK+R + PN T +L+
Sbjct: 306 VSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDA 365
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ M EA M G P
Sbjct: 366 FCKA-----------------------------------GMLLEANKFFVDMIRVGLQPN 390
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + DLNE + + GV TY L++ L + GR E +
Sbjct: 391 EFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFG 450
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K N Y + + K MM++A +I EM +++ P+L+ + T I G C+
Sbjct: 451 ALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQN 510
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E+ + ++ +++CG + + + ++ID + + +A++ L EM + G+ +TY
Sbjct: 511 EIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYG 570
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI LC IG V +++R F M + + P+I + ALI C+ + +E+A+ F ML
Sbjct: 571 VLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDK 630
Query: 425 GLRPDNFSYSALIKALIKSGRFDEA-----KQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
G+ PD Y++LI +K G EA + + ME + C +YTS ++ + G
Sbjct: 631 GISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLC---AYTS--LIWGFSRYG 685
Query: 480 RFEEAHDIVKTSKERGI 496
+ + A ++ +GI
Sbjct: 686 QVQLAKSLLDEMLRKGI 702
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/524 (23%), Positives = 221/524 (42%), Gaps = 70/524 (13%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P +++ + + LV ++ A F +M+ + P + N L+H + + AL
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
K M G +P+V+TY ++I + + E MK + + P+ T SL+ G +
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGK 298
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
M + A ++ +M D G P+ T
Sbjct: 299 V-----------------------------------GMLTGAVSVFEEMKDAGCEPDVIT 323
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + C + + L +RG++P TY L++A KAG +E +++ +
Sbjct: 324 YNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMI 383
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ L N +Y +ID CK+ ++ A ++ EM+ + N+VT+ L+ G C+D +
Sbjct: 384 RVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMR 443
Query: 308 KTRELLVMLLECGF-----------------------------------KPDKFTFNSMI 332
+ EL LL+ G+ KPD + + I
Sbjct: 444 EAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKI 503
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
LCR + ED++ + EM++ G+ N+ Y LI + +G ++ L Q+MQ I
Sbjct: 504 WGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIK 563
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
+ T+ LI C++ +++A + F M GL+P+ Y+ALI L K+ +EAK
Sbjct: 564 ITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNL 623
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
F M G +PD +++ ++ G EA + E G+
Sbjct: 624 FNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGM 667
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 200/457 (43%), Gaps = 2/457 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN++ID K + A F++M C+PD TYN LI+ C+ + +A
Sbjct: 281 GLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQA 340
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M+ G PNV TY+ LID FC A + E + M + PNE T SL+
Sbjct: 341 FEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDA 400
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ D ++AF+L M++ + +V T LL L + EA + + G+
Sbjct: 401 NCKIGDLNEAFKLESE-MQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTL 459
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ + + + IL+ K+ +KP Y + L + + +
Sbjct: 460 NQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVI 519
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ L +N Y +ID + KV A + +EM+D I +VT+ LI G CK
Sbjct: 520 REMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKI 579
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V + + G +P+ + ++ID LC+ E+A + +EM++ G+ P+ + Y
Sbjct: 580 GLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVY 639
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI G+ +L L +M + D+ + +LI F R +++ A+ ML
Sbjct: 640 TSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLR 699
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
G+ PD L++ + G +EA M + G
Sbjct: 700 KGIIPDQVLCICLLRKYYELGDINEALALHDDMARRG 736
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 160/349 (45%), Gaps = 35/349 (10%)
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
CN LL+RLS +S A + + M G P T++ + CL DL + +
Sbjct: 219 CNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMK 278
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+G++P ++ +YN +ID + KV M+
Sbjct: 279 AKGLRP-----------------------------------DIVTYNSLIDGYGKVGMLT 303
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + EM+D P+++T+N+LI+ CK + + E L + + G +P+ T++++I
Sbjct: 304 GAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLI 363
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
D C+A +A +M+ G+ PN TY LI + C IGD+ + +L +MQ ++
Sbjct: 364 DAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVN 423
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
+I T+ AL+ C ++ +AE+ F ++L G + Y++L IK+ ++A
Sbjct: 424 LNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDI 483
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
M + PD + L +Q E++ +++ + G++ S+
Sbjct: 484 LEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSY 532
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 163/383 (42%), Gaps = 35/383 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ Y ++IDA K ++ A+ +M + TY L+ G+C G + E
Sbjct: 385 VGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMRE 444
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L + G+ N YT L G+ AK + + +LE M ++N+ P+
Sbjct: 445 AEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPD--------- 495
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
L+ T ++ L + ++ A++R+M D G
Sbjct: 496 --------------------------LLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTA 529
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
S + + E +L G+K TY +L++ L K G + RY
Sbjct: 530 NSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYF 589
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+H+ ++ L N+ Y +ID CK + ++ A + EM D+ I+P+ + + +LI G+ K
Sbjct: 590 DHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKH 649
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ L ++E G + D + S+I R + + A L EM+ G+ P+ +
Sbjct: 650 GNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLC 709
Query: 364 NILIRSLCAIGDVARSLRLFQKM 386
L+R +GD+ +L L M
Sbjct: 710 ICLLRKYYELGDINEALALHDDM 732
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 143/555 (25%), Positives = 249/555 (44%), Gaps = 66/555 (11%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP+ Y +++ L K+ ++ A F +M + C PD YN LI G+ + G D A
Sbjct: 354 SPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACG 413
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNE----------- 115
L K+M+ G PN+ TY I+I A R E +++ +KE+ P+
Sbjct: 414 LFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLG 473
Query: 116 ---------ATVRSLVHGVFRCL---DPHKAFELLI----RFMEREPLTQK----LVCNT 155
A ++ +V C+ D + E I R +E L K + NT
Sbjct: 474 KGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNT 533
Query: 156 LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRG 215
L+ +N EA +L M +P T+ V L L+E +L K+G
Sbjct: 534 LMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQG 593
Query: 216 VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT 275
+P TY LM + YK ++ E + + + V++V++Y++VI+C CK + +D+A
Sbjct: 594 CEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQAL 653
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN------ 329
++ M++ + P L + TL+S KD ++ ++ L E PD F +N
Sbjct: 654 DVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGL 713
Query: 330 -----------------------------SMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
S++D L ++ R E+A + ++M E G P+
Sbjct: 714 VKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDV 773
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ Y L+ L G ++ +L +F+ M R PD+ T+++LI S + ++E+A F +
Sbjct: 774 VAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFEN 833
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
++ G P+ YS+LI + K G D A + F M++ C P+ T N +L L + GR
Sbjct: 834 SISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGR 893
Query: 481 FEEAHDIVKTSKERG 495
A +++ ++ G
Sbjct: 894 LNVAEKLLEEMEKVG 908
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 137/523 (26%), Positives = 235/523 (44%), Gaps = 31/523 (5%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G +PST +YN V++ LVK A + F ++ + +PD T+ I +H R G +D
Sbjct: 246 FGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDP 305
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +++M G P V+T+T+LID + + E + MK PN T +LV+
Sbjct: 306 AAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVN 365
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +A E+ + E + NTL+ L A A + ++M DRG +P
Sbjct: 366 GLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVP 425
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG--------- 234
T++ ++ L E + ++G P TY L++ L K G
Sbjct: 426 NLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAII 485
Query: 235 -------------RDVEGDRYLNHVFKDRLVSNVN---------SYNMVIDCFCKVNMMD 272
RD DR V + +YN ++ F +D
Sbjct: 486 KEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVD 545
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A ++ M+ + P +VT+ TL+ G K + + LL + + G +P T++S++
Sbjct: 546 EAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLM 605
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
+ + E++L EMV G + TY+++I LC DV ++L +F +M+ + +
Sbjct: 606 ASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGME 665
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
P + + L+ S + KI+ A + F + L PD F Y+ ++ L+KS R DEA +
Sbjct: 666 PLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKL 725
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
SM+ PD +T +L+ L + GR EEA ++ E G
Sbjct: 726 VDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 129/485 (26%), Positives = 235/485 (48%), Gaps = 4/485 (0%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN ++ A + + +D A + M +C P TY L+ G+ + G +DEA+ L+++ME
Sbjct: 531 YNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREME 590
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G P+V TY+ L+ F + E + + M + + +T +++ + + D
Sbjct: 591 KQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVD 650
Query: 133 KAFELLIRFMER--EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A ++ R E EPL TLL L + A I ++ + +P++ ++
Sbjct: 651 QALDVFGRMKEEGMEPLLGNY--KTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNI 708
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
V LV ++E C ++D+ + + P TY L++ L K+GR E + ++
Sbjct: 709 MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+V +Y ++D K + A I R M + P++VT+++LI K+ V +
Sbjct: 769 HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+ G P+ ++S+ID + + AL+ EM PPN +TYN L+ L
Sbjct: 829 YFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGL 888
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
G + + +L ++M+ PD+ T+N LI +M +++AE F M G+ PD
Sbjct: 889 AKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDV 948
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
++++LI++L K + EA + F SME+ G NP T N++++ L + G+ EA I
Sbjct: 949 ITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHE 1008
Query: 491 SKERG 495
K +G
Sbjct: 1009 MKVKG 1013
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 124/510 (24%), Positives = 227/510 (44%), Gaps = 31/510 (6%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P + + + + +S +D A Q+M P T+ +LI + + G +DEA
Sbjct: 283 IQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEAC 342
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M+ L +PNV TYT L++G A R+ E V MKE N P+ +L+ G+
Sbjct: 343 KFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGL 402
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ + A L +R + N ++ L EA + + ++G +P+
Sbjct: 403 GKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDV 462
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVK------------------------PRFS 221
T++ + L G +++ I+ +++G + P
Sbjct: 463 FTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLG 522
Query: 222 -------TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
TY LM A G E + L + K + V +Y ++D K +D A
Sbjct: 523 FKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEA 582
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ REM + P++VT+++L++ K + ++ L ++ G D T++ +I+C
Sbjct: 583 VSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINC 642
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LC++ + ALD M E G+ P Y L+ SL + +L++F ++Q + PD
Sbjct: 643 LCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPD 702
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+ +N ++ + N++++A K SM + PD F+Y++L+ L KSGR +EA F
Sbjct: 703 TFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFT 762
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
M + G PD +++ L + G+ A
Sbjct: 763 KMTEEGHEPDVVAYTSLMDVLGKGGKLSHA 792
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 202/436 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS Y++++ + K + + + F +M C D TY+++I+ +C+ VD+A
Sbjct: 593 GCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQA 652
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + +M+ G P + Y L+ +++ ++ ++E ++ P+ +V+G
Sbjct: 653 LDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNG 712
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A +L+ + L +LL L + EA + KM + G+ P+
Sbjct: 713 LVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPD 772
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + L G L+ I K+ P TY L+++L K GR E +
Sbjct: 773 VVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFE 832
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ NV Y+ +ID F K M+DRA E+ EM+ R PN+VT+N L+SG K
Sbjct: 833 NSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAG 892
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ +LL + + G PD T+N +ID + + ++A M E G+ P+ IT+
Sbjct: 893 RLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFT 952
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI SL + + + LF M+ + +P + T+N LI R K+ +A F M
Sbjct: 953 SLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVK 1012
Query: 425 GLRPDNFSYSALIKAL 440
G PD + + + L
Sbjct: 1013 GCMPDGITIGIMKRIL 1028
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 187/443 (42%), Gaps = 35/443 (7%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
GY+ V TYT++I A+ V ++L M + + + SL+ + A
Sbjct: 177 GYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGA 236
Query: 135 FELL--IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
E+ ++ P T + N +L L A + K+G P++ TF V
Sbjct: 237 LEIFNQMKSFGCNPSTN--MYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFV 294
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L+ + IK G+ P T+ +L++AL K+G E ++ N + R
Sbjct: 295 HSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCS 354
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
NV +Y +++ K ++ A E+ EM++ + +P+ + +NTLI G K E L
Sbjct: 355 PNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGL 414
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+ + G P+ T+N MI L +A R +A ++ E G P+ TYN LI L
Sbjct: 415 FKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGK 474
Query: 373 IGDVARSLRLFQKM----------------------QADRI---------SPDIYTFNAL 401
G + + L + ++M ADR S T+N L
Sbjct: 475 GGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTL 534
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
+ +F +++A K M P +Y+ L+ L K+GR DEA ME+ GC
Sbjct: 535 MSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGC 594
Query: 462 NPDSYTSNLILETLVQQGRFEEA 484
P T + ++ + ++ + EE+
Sbjct: 595 EPSVVTYSSLMASFYKRDQEEES 617
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 128/281 (45%)
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G TY L+++ L A + L ++K+ +++ ++ F N + A
Sbjct: 177 GYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGA 236
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
EI +M+ P+ +N ++ K H + L + +PD TF +
Sbjct: 237 LEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHS 296
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
R+ R + A + + EM++ G+ P T+ +LI +L G++ + + F M+ R SP+
Sbjct: 297 FNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPN 356
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+ T+ L+ + ++E+A + F M PD +Y+ LI L K+G D A F
Sbjct: 357 VVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFK 416
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
M+ G P+ T N+++ L + GR EA + KE+G
Sbjct: 417 EMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQG 457
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 112/249 (44%)
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+D V +Y ++I D +I M ++ +L+ V
Sbjct: 175 QDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVS 234
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
E+ + G P +N +++ L + + A+ ++ ++ + P+ T+ I +
Sbjct: 235 GALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFV 294
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
S G + + Q+M I P ++TF LI + + I++A K F M L
Sbjct: 295 HSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCS 354
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P+ +Y+ L+ L K+GR +EA + F+ M++N C+PD+ N +++ L + G + A +
Sbjct: 355 PNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGL 414
Query: 488 VKTSKERGI 496
K K+RG+
Sbjct: 415 FKEMKDRGL 423
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%)
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
T+ +I E ++L + + G + S++ + AL+ ++M
Sbjct: 184 TYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQM 243
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
+G P+T YN ++ L G ++ +F K+ RI PD TF + SF R ++
Sbjct: 244 KSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRL 303
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
+ A + M+ G+ P +++ LI AL+KSG DEA + F M+ C+P+ T +
Sbjct: 304 DPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTL 363
Query: 472 LETLVQQGRFEEAHDIVKTSKERGIS 497
+ L + GR EEA ++ KE S
Sbjct: 364 VNGLAKAGRLEEACEVFVEMKENNCS 389
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P YN +ID + K +D A F++M PD T+ LI + ++ + E
Sbjct: 907 VGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLE 966
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
A L ME GY P+V TY +LID A +V E + MK + P+ T+
Sbjct: 967 ACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITI 1021
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 139/478 (29%), Positives = 227/478 (47%), Gaps = 24/478 (5%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P+ +TYNIL+ +C G ++EA+ +V M G G APN TY L+ FC A + RV
Sbjct: 8 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67
Query: 103 LEIMKER-NVCPNEATVRSLVHGV---FRCLDPHKAFELLIRFMEREPLTQKLVC-NTLL 157
+ +M+E N PN T S+V+G+ R K F+ ++R E L +V NTLL
Sbjct: 68 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR----EGLAPDVVSYNTLL 123
Query: 158 YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK 217
E+ A+ +M RG +P+ TF + +L + ++ +RG++
Sbjct: 124 SGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLR 183
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
T+ L++ K G + + + K + +V YN +I+ +CK+ MD A E+
Sbjct: 184 MNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 243
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
REM + + P++VT++T+ISG+CK + +L +L+ G PD T++S+I LC
Sbjct: 244 IREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCE 303
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
R DA + M++ GV P+ TY LI C G+V ++L L +M + PD+ T
Sbjct: 304 EKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVT 363
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI----KALIKS---------- 443
++ LI + + ++A + F + PDN Y AL+ KA KS
Sbjct: 364 YSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCM 423
Query: 444 -GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
G EA + + SM D ++++ + G +A K G S S
Sbjct: 424 KGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNS 481
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/501 (24%), Positives = 236/501 (47%), Gaps = 16/501 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ YN ++ AL ++ A M C P+ TYN L+ CR G +D A
Sbjct: 5 GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64
Query: 65 LRLVKQMEGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
R+V M G A PN+ T+ +++G C A R+ +V + M + P+ + +L+
Sbjct: 65 ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 124
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + H++ + +R + + +L++ +A A++ +M +RG
Sbjct: 125 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 184
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
TF + L++ ++ K G++P Y L+ K GR +
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 244
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ R+ +V +Y+ +I +CKV +D A ++ ++M + + P+ +T+++LI G C++
Sbjct: 245 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 304
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ EL +L+ G +PD+FT+ ++ID C+ E AL EM+ GV P+ +TY
Sbjct: 305 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTY 364
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN---------------ALIQSFCRM 408
++LI L + RL K+ + PD ++ AL++ FC
Sbjct: 365 SVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMK 424
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+++A+K + SML + D YS LI + G +A M ++G +P+S ++
Sbjct: 425 GLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTST 484
Query: 469 NLILETLVQQGRFEEAHDIVK 489
++ L ++G EA + ++
Sbjct: 485 ISLVRGLFEEGMVVEADNAIQ 505
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 167/347 (48%), Gaps = 39/347 (11%)
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P T++ V L L E G++ G P TY L+ A +AG
Sbjct: 4 HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDG 63
Query: 239 GDRYLNHVFKD-RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+R ++ + ++ N+ ++N +++ CK M+ A ++ EM +AP++V++NTL+
Sbjct: 64 AERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLL 123
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE--------------- 342
SG+CK +H++ + + + G PD TF S+I C+A E
Sbjct: 124 SGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLR 183
Query: 343 --------------------DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
DAL + EM + G+ P+ + YN LI C +G + + L
Sbjct: 184 MNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 243
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
++M+A R+ PD+ T++ +I +C++ ++ A + ML G+ PD +YS+LI+ L +
Sbjct: 244 IREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCE 303
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA---HD 486
R ++A + F +M Q G PD +T +++ ++G E+A HD
Sbjct: 304 EKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHD 350
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/478 (23%), Positives = 208/478 (43%), Gaps = 25/478 (5%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ +N++++ L K+ ++ A F +M + PD +YN L+ G C++G + E+L +
Sbjct: 79 PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAV 138
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+M G P+V T+T LI C A + + ++ M+ER + NE T +L+ G +
Sbjct: 139 FSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCK 198
Query: 128 CLDPHKAF----ELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
K F L + M + + +VC N L+ A ++R+M +
Sbjct: 199 -----KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK 253
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ T+ ++ +L+ + +K+GV P TY L+ L + R +
Sbjct: 254 PDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACEL 313
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
++ + + + +Y +ID CK +++A + EM + + P++VT++ LI+G K
Sbjct: 314 FENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSK 373
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDC---------------LCRAHRFEDALDC 347
A + LL L PD +++++ C C ++A
Sbjct: 374 SARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKV 433
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
M++ + Y+ILI C G+V ++L ++M SP+ + +L++
Sbjct: 434 YQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFE 493
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
+ +A+ A +LT D + ALI K G D M ++G P S
Sbjct: 494 EGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPSS 551
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 158/357 (44%), Gaps = 22/357 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI PS YNA+I+ K +DLA ++M + KPD TY+ +I G C++G +D A
Sbjct: 216 GIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSA 275
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L ++M G P+ TY+ LI G C KR+ + + E M + V P+E T +L+ G
Sbjct: 276 FQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDG 335
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + KA L + + L + + L+ LS ++ EA +L K+ +P+
Sbjct: 336 HCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPD 395
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ +D + C K F + + L++ G E D+
Sbjct: 396 NIKYDALMLCC--------------------SKAEFKSVVALLKGFCMKGLMKEADKVYQ 435
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + Y+++I C+ + +A ++M +PN + +L+ G ++
Sbjct: 436 SMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEG 495
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL-DCLSEMVEWGVPPNT 360
V + + LL C D ++ID L R DAL D L M G+ P++
Sbjct: 496 MVVEADNAIQDLLTCCPLADAEASKALID-LNRKEGNVDALIDVLCGMARDGLLPSS 551
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 81/147 (55%), Gaps = 1/147 (0%)
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
MV GV PN TYNIL+R+LCA G + ++ + M+ +P+ T+N L+ +FCR +
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 411 IEKAEKAFFSMLTLG-LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
++ AE+ M G +P+ ++++++ L K+GR + A++ F M + G PD + N
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGI 496
+L + G E+ + +RG+
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGL 147
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 15/147 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P Y +ID K +++ A +M PD TY++LI+G+ + E
Sbjct: 320 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 379
Query: 64 ALRLVKQMEGLGYAPNVYTY---------------TILIDGFCNAKRVAEVFRVLEIMKE 108
A RL+ ++ P+ Y L+ GFC + E +V + M +
Sbjct: 380 AHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLD 439
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAF 135
RN + + L+HG R + KA
Sbjct: 440 RNWKLDGSVYSILIHGHCRGGNVRKAL 466
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/481 (24%), Positives = 243/481 (50%), Gaps = 3/481 (0%)
Query: 20 LVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPN 79
LV++ ++ + + M PD LI G+C+ G +A R+++ +E G P+
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179
Query: 80 VYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLI 139
V TY +LI G+C + E+ L+++ +V P+ T +++ + +A E+L
Sbjct: 180 VITYNVLISGYC---KTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLD 236
Query: 140 RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL 199
R M+RE + L+ S +A +L +M D+G P+ T++ + +
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
L+E L+ G +P T+ +++ ++ GR ++ +++L + + +V ++N
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFN 356
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
++I+ C+ ++ RA ++ +M PN +++N L+ CKD ++ + E L +++
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSR 416
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G PD T+N+++ LC+ + + A++ L+++ G P ITYN +I L +G +
Sbjct: 417 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDA 476
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
++L +M+ + PDI T++ L+ R K+++A F + +G++P+ +Y++++
Sbjct: 477 IKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLG 536
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
L K+ + A M GC P + +++E L +G +EA +++ RG+ K
Sbjct: 537 LCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKK 596
Query: 500 S 500
S
Sbjct: 597 S 597
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 176/387 (45%), Gaps = 8/387 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ +SP YN ++ L S + A + +C PD TY ILI C+ V +
Sbjct: 206 MSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQ 265
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT----VR 119
A++L+ +M G P+V TY +LI+G C R+ E R L M PN T +R
Sbjct: 266 AMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILR 325
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
S+ R +D K +IR + + N L+ L + A +L KM
Sbjct: 326 SMC-STGRWMDAEKFLAEMIR---KGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQH 381
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G P S +++ + L + LD + RG P TY L+ AL K G+
Sbjct: 382 GCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVA 441
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
LN + + +YN VID KV D A ++ EM+ + + P+++T++TL+ G
Sbjct: 442 VEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGG 501
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
++ +V + L E G KP+ T+NS++ LC+A + A+D L+ MV G P
Sbjct: 502 LSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPT 561
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKM 386
+Y ILI L G +L L ++
Sbjct: 562 ETSYMILIEGLAYEGLAKEALELLNEL 588
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 144/272 (52%), Gaps = 3/272 (1%)
Query: 230 LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
L + G EG ++L + + ++ + +I CK +AT + + D P+
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
++T+N LISG+CK E+ +LL + PD T+N+++ LC + + ++A++ L
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLD 236
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
++ P+ ITY ILI + C V ++++L +M+ PD+ T+N LI C+
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
++++A + M + G +P+ +++ +++++ +GR+ +A++ M + GC+P T N
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFN 356
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+++ L ++G A D+++ + G + S
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNSL 388
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 154/364 (42%), Gaps = 35/364 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN +I+ + K +D A M C+P+ T+NI++ +C G +A
Sbjct: 277 GCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDA 336
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + +M G +P+V T+ ILI+ C + VLE M + PN + L+H
Sbjct: 337 EKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHA 396
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A E L + R + NTLL L + A IL ++G +G P
Sbjct: 397 LCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPV 456
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L ++ +LD +G+KP TY L+ L + G+
Sbjct: 457 LITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGK--------- 507
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+D A ++ + + PN +T+N+++ G CK
Sbjct: 508 --------------------------VDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKAR 541
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + L ++ G KP + ++ +I+ L ++AL+ L+E+ GV +
Sbjct: 542 QTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQ 601
Query: 365 ILIR 368
++++
Sbjct: 602 VVVK 605
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N+ + L R E+ L +MV G P+ I LIR LC G ++ R+ + ++
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
PD+ T+N LI +C+ +I A + M + PD +Y+ +++ L SG+ E
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKE 230
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
A + Q C PD T +++E ++ +A ++ +++G
Sbjct: 231 AMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKG 277
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 129/530 (24%), Positives = 240/530 (45%), Gaps = 70/530 (13%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+SF G +P +Y+ +++A +S + + M C D N++++ IC G
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VDEA+ L++++ G ++ +Y ++ G C AKR +V +++ M + PN T
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF-- 254
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
NTL+ L N + +L +M + G
Sbjct: 255 ---------------------------------NTLIGYLCRNGLFERVHEVLAQMSEHG 281
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ + + + L IL+ G+KP Y +++ L A R E +
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L+ +F+ + ++N+++D FC+ ++DR E+ +M P+++T+ T+I+G
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ + + LL + CG KP+ ++ ++ LC A R+ DA + +S+M++ G PPN
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+T+N LI LC G V +++ L ++M + SPD+ +++ +I + K E+A +
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521
Query: 421 MLTLGLRPDNFSYSALIKALIKSGR-------FDEAKQT--------------------- 452
M+ G+ P+ YS++ AL + GR FD K T
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581
Query: 453 -------FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
F M NGC P+ T ++++ L +G +EA +++ RG
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 200/451 (44%), Gaps = 38/451 (8%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
YN ++ G CR G + + + PN YT+ ++ G C R+A+ VL+ M
Sbjct: 81 AYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
+ P ++ R + +L + CN +L +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
EA +LRK+ F G + +Y +
Sbjct: 198 DEAVGLLRKL---------------------------------AFF--GCEADIVSYNAV 222
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ L A R + + ++ + + N+ ++N +I C+ + +R E+ +M +
Sbjct: 223 LKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGC 282
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P++ + T+I G CK+ + E+L + G KP+ +N+++ LC A R+++A +
Sbjct: 283 TPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
LSEM + P + +T+NIL+ C G V R + L ++M + PD+ T+ +I FC
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC 402
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ I++A SM + G +P+ SY+ ++K L +GR+ +A++ M Q GC P+
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T N ++ L ++G E+A +++K G S
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCS 493
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 208/486 (42%), Gaps = 7/486 (1%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YNA++ ++ + A + V P+ +T+ ++ G+C G + +AL ++ +M
Sbjct: 82 YNAMVAGYCRAGQLAAARRLAAAVPV---PPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR--CLD 130
G AP Y ++++ C + RVLE M + + +++ + C+D
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+ F E + N +L L + ++ +M P TF+
Sbjct: 199 EAVGLLRKLAFFGCE--ADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L +L + G P Y +++ + K G + LN +
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
L NV YN V+ C A E+ EM +D + VTFN L+ C++ V +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
ELL +L G PD T+ ++I+ C+ ++A+ L M G PNT++Y I+++ L
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C+ G + L +M P+ TFN LI C+ +E+A + ML G PD
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 496
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
SYS +I L K+G+ +EA + M G +P++ + I L ++GR + +
Sbjct: 497 ISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDN 556
Query: 491 SKERGI 496
K+ I
Sbjct: 557 IKDTTI 562
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 84/178 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ +N +I+ L K ++ A +QM V+ C PD +Y+ +I G+ + G +EA
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+ M G +PN Y+ + RV +V ++ + +K+ + + +++
Sbjct: 516 LELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISS 575
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ + + +A + + + + L+ L++ +A EA +L ++ RG L
Sbjct: 576 LCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 129/530 (24%), Positives = 240/530 (45%), Gaps = 70/530 (13%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+SF G +P +Y+ +++A +S + + M C D N++++ IC G
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VDEA+ L++++ G ++ +Y ++ G C AKR +V +++ M + PN T
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF-- 254
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
NTL+ L N + +L +M + G
Sbjct: 255 ---------------------------------NTLIGYLCRNGLFERVHEVLAQMSEHG 281
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ + + + L IL+ G+KP Y +++ L A R E +
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L+ +F+ + ++N+++D FC+ ++DR E+ +M P+++T+ T+I+G
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ + + LL + CG KP+ ++ ++ LC A R+ DA + +S+M++ G PPN
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+T+N LI LC G V +++ L ++M + SPD+ +++ +I + K E+A +
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521
Query: 421 MLTLGLRPDNFSYSALIKALIKSGR-------FDEAKQT--------------------- 452
M+ G+ P+ YS++ AL + GR FD K T
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581
Query: 453 -------FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
F M NGC P+ T ++++ L +G +EA +++ RG
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 200/451 (44%), Gaps = 38/451 (8%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
YN ++ G CR G + + + PN YT+ ++ G C R+A+ VL+ M
Sbjct: 81 AYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
+ P ++ R + +L + CN +L +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
EA +LRK+ F G + +Y +
Sbjct: 198 DEAVGLLRKL---------------------------------AFF--GCEADIVSYNAV 222
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ L A R + + ++ + + N+ ++N +I C+ + +R E+ +M +
Sbjct: 223 LKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGC 282
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P++ + T+I G CK+ + E+L + G KP+ +N+++ LC A R+++A +
Sbjct: 283 TPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
LSEM + P + +T+NIL+ C G V R + L ++M + PD+ T+ +I FC
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC 402
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ I++A SM + G +P+ SY+ ++K L +GR+ +A++ M Q GC P+
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T N ++ L ++G E+A +++K G S
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCS 493
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 208/486 (42%), Gaps = 7/486 (1%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YNA++ ++ + A + V P+ +T+ ++ G+C G + +AL ++ +M
Sbjct: 82 YNAMVAGYCRAGQLAAARRLAAAVPV---PPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR--CLD 130
G AP Y ++++ C + RVLE M + + +++ + C+D
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+ F E + N +L L + ++ +M P TF+
Sbjct: 199 EAVGLLRKLAFFGCE--ADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L +L + G P Y +++ + K G + LN +
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
L NV YN V+ C A E+ EM +D + VTFN L+ C++ V +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
ELL +L G PD T+ ++I+ C+ ++A+ L M G PNT++Y I+++ L
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C+ G + L +M P+ TFN LI C+ +E+A + ML G PD
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 496
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
SYS +I L K+G+ +EA + M G +P++ + I L ++GR + +
Sbjct: 497 ISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDN 556
Query: 491 SKERGI 496
K+ I
Sbjct: 557 IKDTTI 562
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 84/178 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ +N +I+ L K ++ A +QM V+ C PD +Y+ +I G+ + G +EA
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+ M G +PN Y+ + RV +V ++ + +K+ + + +++
Sbjct: 516 LELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISS 575
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ + + +A + + + + L+ L++ +A EA +L ++ RG L
Sbjct: 576 LCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 131/486 (26%), Positives = 240/486 (49%), Gaps = 3/486 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS + ++A++ A K +I ++M +P+ +TY I I + R G +DEA
Sbjct: 224 GLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEA 283
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++K+M+ G P+V TYT+LID C A+++ + + MK + P++ T +L+
Sbjct: 284 YRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDK 343
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLP 183
C K E + ME + +V T+L L +EA +L M +G LP
Sbjct: 344 FSDCGHLDKV-EKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLP 402
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ ++ L+ L++ + GV+P TY+LL++ K+G +
Sbjct: 403 NLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETF 462
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + N+ + N + ++ + A + E++ +AP+ VT+N ++ + K
Sbjct: 463 EKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKV 522
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V + +LL + + +PD NS+ID L +A R E+A M E + P +TY
Sbjct: 523 GQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTY 582
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NIL+ L G + ++++LF+ M SP+ TFN L+ C+ ++++ A K F+ M T
Sbjct: 583 NILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTT 642
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+ RPD +++ +I IK + A F M++ PD T +L +++ G+ E+
Sbjct: 643 MNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIED 701
Query: 484 AHDIVK 489
A I +
Sbjct: 702 AFRITE 707
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 230/501 (45%), Gaps = 40/501 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP+T +N ++D L K++ +DLA F +M+ C+PD T+N +IHG + + A
Sbjct: 609 GCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNA 668
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE-------------------- 104
+ L QM+ L P+ T L+ G + ++ + FR+ E
Sbjct: 669 IWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMG 727
Query: 105 ------------IMKERNVCPNEATVRSLVHGVFRCLDPHK----AFELLIRFMEREPLT 148
+ ER VC S++ + + L HK A + ++F + +
Sbjct: 728 GILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVK 787
Query: 149 QKL-VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGI 207
L V N L+ A + +M G P++ T++ + +NE +
Sbjct: 788 PTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDL 847
Query: 208 LDTFIKRGVKPRFSTYLLLMEALYKAGR-DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
D + RG KP TY +++ L K+ R D D Y N V D ++ +ID
Sbjct: 848 YDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGD-FSPTPCTFGPLIDGLL 906
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K +D A E+ M PN +N L++G+ K V E +++ G +PD
Sbjct: 907 KSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLK 966
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
++ ++D LC A R +DAL ++ + G+ P+ + YN++I L +L LF +M
Sbjct: 967 SYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEM 1026
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
Q I PD+YT+N+LI + + IE+A K + + +GL+P+ F+Y+ALI+ SG
Sbjct: 1027 QNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNS 1086
Query: 447 DEAKQTFLSMEQNGCNPDSYT 467
+ A + M GC+P++ T
Sbjct: 1087 ELAYGIYKKMMVGGCDPNTGT 1107
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 135/517 (26%), Positives = 220/517 (42%), Gaps = 38/517 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P + N++ID L K+ ++ A+ F +M P TYNIL+ G+ + G + +A++L
Sbjct: 542 PDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQL 601
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ M G G +PN T+ L+D C V ++ M N P+ T +++HG +
Sbjct: 602 FESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIK 661
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTL-----------LYRLSNNSMASEAAAILRKM 176
A L + + +C L +R++ + + I R
Sbjct: 662 QNQIKNAIWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSF 721
Query: 177 GD---RGYLPESST-----FDYTVTCLVTGLDLNETCGILDTFIKR-------------- 214
+ G L E+ T F + C D + I+ K
Sbjct: 722 WEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFT 781
Query: 215 ---GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR-LVSNVNSYNMVIDCFCKVNM 270
GVKP Y LL++ + +VE L K + +YN +ID K
Sbjct: 782 KELGVKPTLKVYNLLIDGFLEV-HNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGK 840
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
++ ++ EM R PN +T+N +IS K + K +L L+ F P TF
Sbjct: 841 INELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGP 900
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+ID L ++ R +DA + MV +G PN+ YNIL+ +G V + F++M +
Sbjct: 901 LIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEG 960
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
I PD+ ++ L+ C +++ A F + GL PD +Y+ +I L +S R +EA
Sbjct: 961 IRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEAL 1020
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
F M+ G PD YT N ++ L G EEA I
Sbjct: 1021 SLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKI 1057
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 131/572 (22%), Positives = 240/572 (41%), Gaps = 77/572 (13%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ Y I L + ID AY ++M D C PD TY +LI +C +D+
Sbjct: 258 MGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDD 317
Query: 64 AL-----------------------------------RLVKQMEGLGYAPNVYTYTILID 88
A+ ++ +ME GYAP+V T+TIL++
Sbjct: 318 AMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVN 377
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELL--IRFMEREP 146
C A R+ E F +L+ M+++ V PN T +L+ G+ R A +L + + EP
Sbjct: 378 ALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEP 437
Query: 147 LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
+ L+ + +A KM RG P + ++ L L E
Sbjct: 438 TAYTYIL--LIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKA 495
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+ + G+ P TY ++M+ K G+ E + L+ + K + +V N +ID
Sbjct: 496 MFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLY 555
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K ++ A ++ M + ++AP +VT+N L++G K+ ++ K +L + G P+
Sbjct: 556 KAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTI 615
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
TFN+++DCLC+ + AL +M P+ +T+N +I + ++ LF +M
Sbjct: 616 TFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM 675
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKA---------------EKAFFSMLTLGLRPDNF 431
+ + PD T L+ + +IE A +++F+ + G+ +
Sbjct: 676 KK-LLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAG 734
Query: 432 SYSA---------------------LIKALIKSGRFDEAKQTFLSMEQN-GCNPDSYTSN 469
+ A +IK L K + A+ F+ + G P N
Sbjct: 735 TEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYN 794
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
L+++ ++ E A ++ + K G + +F
Sbjct: 795 LLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTF 826
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/529 (24%), Positives = 226/529 (42%), Gaps = 38/529 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P+ NA + +L + + A F ++ PD TYN+++ ++G VDEA
Sbjct: 469 GIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEA 528
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+ +M + P+V LID A RV E +++ M+E N+ P T L+ G
Sbjct: 529 IKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAG 588
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + KA +L + NTLL L N A + KM P+
Sbjct: 589 LGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPD 648
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR--------- 235
TF+ + + + + +K+ ++P T L+ + K+G+
Sbjct: 649 VLTFNTIIHGFIKQNQIKNAIWLFHQ-MKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITE 707
Query: 236 ----------------DVEGDRYLNH------VFKDRLVSN-VNSYNMVIDCFCKVNMMD 272
DV G +F +RLV + + V+ KV
Sbjct: 708 DFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKH 767
Query: 273 RATEICREM-----RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+ T + R + ++ + P L +N LI G + V L + G PD FT
Sbjct: 768 KKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFT 827
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+NS+ID ++ + + D EM+ G PNTITYN++I +L + +++ L+ +
Sbjct: 828 YNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLV 887
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ SP TF LI + +++ A + F M+ G RP++ Y+ L+ K G D
Sbjct: 888 SGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVD 947
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
A + F M + G PD + ++++ L GR ++A + K+ G+
Sbjct: 948 TACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGL 996
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 209/454 (46%), Gaps = 35/454 (7%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
+ ++YN LIH + + G EAL + ++M G P++ T++ L+ + + V +L
Sbjct: 193 NAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLL 252
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
E M+ + PN T + + IR + R+
Sbjct: 253 EEMESMGLRPNIYT-----------------YTICIRVLGRD------------------ 277
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
EA I+++M D G P+ T+ + L T L++ + KP TY
Sbjct: 278 GKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTY 337
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
+ L++ G + ++ + D +V ++ ++++ CK ++ A ++ MR
Sbjct: 338 VTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRK 397
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
+ + PNL T+NTLISG + + +L + G +P +T+ +ID ++
Sbjct: 398 QGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGK 457
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
AL+ +M G+ PN + N + SL +G + + +F ++++ ++PD T+N +++
Sbjct: 458 ALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMK 517
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ ++ ++++A K M + PD ++LI L K+GR +EA Q F ME+ P
Sbjct: 518 CYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAP 577
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T N++L L ++G+ ++A + ++ G S
Sbjct: 578 TVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCS 611
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 185/426 (43%), Gaps = 35/426 (8%)
Query: 94 KRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC 153
+RV ++ V ++M+ + + N T + +F +A L + E +
Sbjct: 138 RRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSY 197
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
N L++ L + EA + R+M G P TF + ++ G+L+
Sbjct: 198 NGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMES 257
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G++P TY + + L + G+ E R + + D +V +Y ++ID C +D
Sbjct: 258 MGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDD 317
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + +M+ P+ VT+ TL+ + K ++ + G+ PD TF +++
Sbjct: 318 AMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVN 377
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI-------------------- 373
LC+A R +A D L M + GV PN TYN LI L
Sbjct: 378 ALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEP 437
Query: 374 ---------------GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
G ++L F+KM+A I+P+I NA + S M ++ +A+ F
Sbjct: 438 TAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMF 497
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+ + GL PD+ +Y+ ++K K G+ DEA + M + C PD N +++TL +
Sbjct: 498 NELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKA 557
Query: 479 GRFEEA 484
GR EEA
Sbjct: 558 GRVEEA 563
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 159/363 (43%), Gaps = 41/363 (11%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ ++YN +ID ++ +++++A+ F++M C PD FTYN LI + G ++E
Sbjct: 784 LGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINE 843
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L +M G PN TY ++I + R+ + + + + P T L+
Sbjct: 844 LFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLID 903
Query: 124 GVF---RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
G+ R D H+ F+ ++ + G
Sbjct: 904 GLLKSGRLDDAHEMFDGMVHY--------------------------------------G 925
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P S+ ++ V ++ C +K G++P +Y +L++ L AGR +
Sbjct: 926 CRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDAL 985
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
Y + + L ++ +YN++I+ + + A + EM++R I P+L T+N+LI
Sbjct: 986 HYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNL 1045
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ + ++ L G KP+ FT+N++I + E A +M+ G PNT
Sbjct: 1046 GIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNT 1105
Query: 361 ITY 363
T+
Sbjct: 1106 GTF 1108
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 162/390 (41%), Gaps = 42/390 (10%)
Query: 16 VIDALVKSNSIDLA---YLKF-QQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
+I L K +A ++KF +++ V KP YN+LI G + V+ A L ++M
Sbjct: 760 IIKVLCKHKKTSVARNVFVKFTKELGV---KPTLKVYNLLIDGFLEVHNVEVAWNLFEEM 816
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
+ G AP+ +TY LID + ++ E+F + + M R PN T ++ + +
Sbjct: 817 KSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRL 876
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
KA +L + GD + P TF
Sbjct: 877 DKAMDLYYNLVS---------------------------------GD--FSPTPCTFGPL 901
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ L+ L++ + D + G +P + Y +L+ K G + + K+ +
Sbjct: 902 IDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGI 961
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
++ SY +++D C +D A +++ + P+LV +N +I+G + +
Sbjct: 962 RPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALS 1021
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
L + G PD +T+NS+I L E+A E+ G+ PN TYN LIR
Sbjct: 1022 LFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYT 1081
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNAL 401
G+ + +++KM P+ TF L
Sbjct: 1082 LSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN +I+ L +S + A F +M PD +TYN LI + +G+++EA
Sbjct: 995 GLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEA 1054
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
++ ++++ +G PNV+TY LI G+ + + + + M PN T L
Sbjct: 1055 GKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%)
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T N M++ L R ED M + N TY I+ +SL G + ++ +KM
Sbjct: 126 TCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKM 185
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ + Y++N LI + ++A + + M++ GL+P ++SAL+ A K
Sbjct: 186 REAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNI 245
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
ME G P+ YT + + L + G+ +EA+ I+K + G
Sbjct: 246 KTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDG 294
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 125/492 (25%), Positives = 228/492 (46%), Gaps = 35/492 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P +AV+ ++ + A K + M + TYN+LIHG+C+ V EA
Sbjct: 220 GVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEA 279
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + + + G G A +V TY L+ GFC ++ ++++ M E P EA V LV G
Sbjct: 280 VEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDG 339
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A+EL++ K+G G++P
Sbjct: 340 LRKQGKIDDAYELVV-----------------------------------KVGRFGFVPN 364
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + L G DL++ + ++P TY +L+++ ++GR Y +
Sbjct: 365 LFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFD 424
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +D + V +YN +I+ CK + A + EM ++ + P TF +LISG+CKD
Sbjct: 425 RMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDL 484
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V K +L +++ G P+ +TF ++I LC ++ +A + E+VE + P +TYN
Sbjct: 485 QVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYN 544
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI C G + ++ L + M + PD YT+ LI C ++ KA+ +
Sbjct: 545 VLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQ 604
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
++ + YSAL+ + GR EA M Q G N D ++++ ++Q +
Sbjct: 605 NVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTF 664
Query: 485 HDIVKTSKERGI 496
D++K ++G+
Sbjct: 665 FDLLKDMHDQGL 676
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 228/493 (46%), Gaps = 1/493 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P+ +YNA+I++L K +D A L + MS+ +P+ TY+ILI CR G +D
Sbjct: 359 FGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDV 418
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ +M G VY Y LI+G C ++ + M + V P T SL+
Sbjct: 419 AISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLIS 478
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + L KAF+L + ++ L+ L + + +EA+ + ++ +R P
Sbjct: 479 GYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKP 538
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + +++ +L+ ++G+ P TY L+ L GR + ++
Sbjct: 539 TEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFI 598
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K + N Y+ ++ +C+ + A EM R I +LV LI G K
Sbjct: 599 DDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQ 658
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ +LL + + G +PD + SMID + F+ A +C MV PN +TY
Sbjct: 659 PDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTY 718
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
L+ LC G++ R+ LF++MQA + P+ T+ + + + +++A +ML
Sbjct: 719 TALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK 778
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL + +++ +I+ K GRF EA + M +NG PD T + ++ + G
Sbjct: 779 -GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGA 837
Query: 484 AHDIVKTSKERGI 496
+ + T RG+
Sbjct: 838 SVKLWDTMLNRGL 850
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 122/500 (24%), Positives = 221/500 (44%), Gaps = 36/500 (7%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S + + P+ Y+ +ID+ +S +D+A F +M D + YN LI+G C+ G
Sbjct: 391 MSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGD 450
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A L +M G P T+T LI G+C +V + F++ M + + PN T +
Sbjct: 451 LSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTA 510
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G+ +A EL +ER+ ++ N L+ + +A +L M +G
Sbjct: 511 LISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKG 570
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG- 239
+P++ T+ ++ L + +++ +D K+ VK Y L+ + GR +E
Sbjct: 571 LVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEAL 630
Query: 240 -------------DRYLNHVFKDRLVSNVNS---------------------YNMVIDCF 265
D + V D + + Y +ID +
Sbjct: 631 SASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTY 690
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
K +A E M + PN+VT+ L++G CK E+ + L + P+
Sbjct: 691 SKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNS 750
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T+ +D L + ++A+ M++ G+ NT+T+NI+IR C +G + ++ +
Sbjct: 751 ITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSE 809
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M + I PD T++ LI +CR + + K + +ML GL PD +Y+ LI +G
Sbjct: 810 MTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGE 869
Query: 446 FDEAKQTFLSMEQNGCNPDS 465
D+A + M + G PD+
Sbjct: 870 LDKAFELRDDMLRRGIIPDN 889
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 211/490 (43%), Gaps = 35/490 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P R +A+++ L+K + F + +PD +T + ++ +C + A
Sbjct: 188 PEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEK 247
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ ME G+ ++ TY +LI G C RV+E V + + + + T +LV G R
Sbjct: 248 IRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCR 307
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+L+ +E + + L+ L +A ++ K+G G++P
Sbjct: 308 LQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFV 367
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + L G DL++ E LY +++
Sbjct: 368 YNALINSLCKGGDLDKA-----------------------ELLY------------SNMS 392
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
L N +Y+++ID FC+ +D A M I + +N+LI+G CK ++
Sbjct: 393 LMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLS 452
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
L + + G +P TF S+I C+ + + A ++M++ G+ PN T+ LI
Sbjct: 453 AAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALI 512
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC+ +A + LF ++ +I P T+N LI+ +CR KI+KA + M GL
Sbjct: 513 SGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLV 572
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD ++Y LI L +GR +AK + + + + +L Q+GR EA
Sbjct: 573 PDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSA 632
Query: 488 VKTSKERGIS 497
+RGI+
Sbjct: 633 SCEMIQRGIN 642
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 205/449 (45%), Gaps = 47/449 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P+ + A+I L +N + A F ++ + KP TYN+LI G CR G +D+A
Sbjct: 500 GITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKA 559
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ M G P+ YTY LI G C+ RV++ ++ + ++NV NE +L+HG
Sbjct: 560 FELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHG 619
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA-AILRKMGDRGYLP 183
+ +A ++R + LVC+ +L + + +L+ M D+G P
Sbjct: 620 YCQEGRLMEALSASCEMIQR-GINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRP 678
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRG-VKPRFSTYLLLMEALYKAGRDVEGDRY 242
++ + ++DT+ K G K F + L++
Sbjct: 679 DNVIY----------------TSMIDTYSKEGSFKKAFECWDLMV--------------- 707
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ NV +Y +++ CK MDRA + + M+ ++ PN +T+ + K
Sbjct: 708 -----TEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTK 762
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + L +L+ G + T N +I C+ RF +A LSEM E G+ P+ +T
Sbjct: 763 EGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVT 821
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y+ LI C G+V S++L+ M + PD+ +N LI C +++KA + ML
Sbjct: 822 YSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDML 881
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
G+ PDN K L K G EA
Sbjct: 882 RRGIIPDN-------KYLQKKGTIFEATH 903
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 159/376 (42%), Gaps = 49/376 (13%)
Query: 111 VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA 170
V N+A++ S L PH ++L+ ++ L + L++ N+S S A
Sbjct: 56 VAFNDASISS-------TLRPHHVEQVLMNTLDDAKLALRFFNFLGLHKNMNHSTTSYAI 108
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR--FSTYLLLME 228
+ + R + P +S +L T + R P+ FS +L
Sbjct: 109 MVHALVHSRLFWPANS--------------------LLHTLLLRESHPKCVFSHFL---- 144
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
D Y F L +N+++ + + + A I + M ++ P
Sbjct: 145 -----------DSYKRCKFSSTL-----GFNLLVQNYVLSSRIFDAVVIVKLMFANNLLP 188
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+ T + L++G K + EL + G +PD +T ++++ +C F A + +
Sbjct: 189 EVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKI 248
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
M G + +TYN+LI LC V+ ++ + + + ++ D+ T+ L+ FCR+
Sbjct: 249 RWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRL 308
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+ E + M+ LG P + S L+ L K G+ D+A + + + + G P+ +
Sbjct: 309 QQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVY 368
Query: 469 NLILETLVQQGRFEEA 484
N ++ +L + G ++A
Sbjct: 369 NALINSLCKGGDLDKA 384
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 129/530 (24%), Positives = 240/530 (45%), Gaps = 70/530 (13%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+SF G +P +Y+ +++A +S + + M C D N++++ IC G
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VDEA+ L++++ G ++ +Y ++ G C AKR +V +++ M + PN T
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF-- 254
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
NTL+ L N + +L +M + G
Sbjct: 255 ---------------------------------NTLIGYLCRNGLFERVHEVLAQMSEHG 281
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ + + + L IL+ G+KP Y +++ L A R E +
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L+ +F+ + ++N+++D FC+ ++DR E+ +M P+++T+ T+I+G
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ + + LL + CG KP+ ++ ++ LC A R+ DA + +S+M++ G PPN
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+T+N LI LC G V +++ L ++M + SPD+ +++ +I + K E+A +
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521
Query: 421 MLTLGLRPDNFSYSALIKALIKSGR-------FDEAKQT--------------------- 452
M+ G+ P+ YS++ AL + GR FD K T
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581
Query: 453 -------FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
F M NGC P+ T ++++ L +G +EA +++ RG
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 200/451 (44%), Gaps = 38/451 (8%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
YN ++ G CR G + + + PN YT+ ++ G C R+A+ VL+ M
Sbjct: 81 AYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
+ P ++ R + +L + CN +L +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
EA +LRK+ F G + +Y +
Sbjct: 198 DEAVGLLRKLA---------------------------------FF--GCEADIVSYNAV 222
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ L A R + + ++ + + N+ ++N +I C+ + +R E+ +M +
Sbjct: 223 LKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGC 282
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P++ + T+I G CK+ + E+L + G KP+ +N+++ LC A R+++A +
Sbjct: 283 TPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
LSEM + P + +T+NIL+ C G V R + L ++M + PD+ T+ +I FC
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC 402
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ I++A SM + G +P+ SY+ ++K L +GR+ +A++ M Q GC P+
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T N ++ L ++G E+A +++K G S
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCS 493
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 210/486 (43%), Gaps = 7/486 (1%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YNA++ ++ + A + V P+ +T+ ++ G+C G + +AL ++ +M
Sbjct: 82 YNAMVAGYCRAGQLAAARRLAAAVPV---PPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR--CLD 130
G AP Y ++++ C + RVLE M + + +++ + C+D
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A LL + + N +L L + ++ +M P TF+
Sbjct: 199 --EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L +L + G P Y +++ + K G + LN +
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
L NV YN V+ C A E+ EM +D + VTFN L+ C++ V +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
ELL +L G PD T+ ++I+ C+ ++A+ L M G PNT++Y I+++ L
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C+ G + L +M P+ TFN LI C+ +E+A + ML G PD
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 496
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
SYS +I L K+G+ +EA + M G +P++ + I L ++GR + +
Sbjct: 497 ISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDN 556
Query: 491 SKERGI 496
K+ I
Sbjct: 557 IKDTTI 562
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 84/178 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ +N +I+ L K ++ A +QM V+ C PD +Y+ +I G+ + G +EA
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+ M G +PN Y+ + RV +V ++ + +K+ + + +++
Sbjct: 516 LELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISS 575
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ + + +A + + + + L+ L++ +A EA +L ++ RG L
Sbjct: 576 LCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 216/475 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P N +I++ + A+ ++ C+PD T+N LI G+C G + EA
Sbjct: 180 GIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEA 239
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L + G G+ P+V TY L++G C + R+L M ++N PN +++
Sbjct: 240 LHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDS 299
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF L + + N+L++ L N +L +M + +P
Sbjct: 300 LCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPN 359
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F V L + ++D IKRGV+P TY LM+ E + +
Sbjct: 360 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFD 419
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ V NV SYN++I+ +C++ MD+A + +M + + + VT+NTLI G C
Sbjct: 420 TMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVG 479
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ L ++ G PD T+ ++D LC+ H +A+ L + + + + YN
Sbjct: 480 RLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYN 539
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I I +C G++ + LF + + + PD+ T+N +I C+ +++A K F M
Sbjct: 540 IAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDEN 599
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
G D Y+ +I+ ++S A Q M G + D T+ LI+E L G
Sbjct: 600 GCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDG 654
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 225/490 (45%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PST + ++ ++ K QM PD +T NILI+ C + + A +
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ LG P+ T+ LI G C ++ E + + P+ T +L++G+ +
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ A LL +++ + NT++ L + +EA + +M +G P+ T
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + L + +L+ + + P + +++AL K G ++ +
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 387
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K + +V +Y ++D C + MD A ++ M + PN+ ++N LI+G+C+ +
Sbjct: 388 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 447
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
K LL + G D T+N++I LC R + A+ EMV G P+ +TY IL+
Sbjct: 448 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 507
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC +A ++ L + ++ + DI +N I CR ++E A F ++ + GL+
Sbjct: 508 DYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQ 567
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD +Y+ +I L K G DEA + F M++NGC+ D N I+ ++ A +
Sbjct: 568 PDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQL 627
Query: 488 VKTSKERGIS 497
++ G S
Sbjct: 628 LQEMLAEGFS 637
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 221/476 (46%), Gaps = 4/476 (0%)
Query: 24 NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTY 83
N++D A F +M P + L+ I ++ L L QM+ G P+VYT
Sbjct: 129 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 188
Query: 84 TILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH--KAFELLIRF 141
ILI+ FC+ +R+ F VL + + P+ T +L+ G+ C++ +A L +
Sbjct: 189 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGL--CVEGKIGEALHLFDKT 246
Query: 142 MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
+ + TL+ L S A +LR M + P ++ + L +
Sbjct: 247 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQV 306
Query: 202 NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
E + I +G+ P TY L+ AL LN + +++ NV ++ V
Sbjct: 307 TEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 366
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
+D CK M+ A ++ M R + P++VT+ L+ GHC +E+ + ++ ++ G
Sbjct: 367 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 426
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
P+ ++N +I+ C+ R + A+ L +M G+ +T+TYN LI LC +G + ++
Sbjct: 427 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 486
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
LF +M A PD+ T+ L+ C+ + + +A ++ L D Y+ I +
Sbjct: 487 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMC 546
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
++G + A+ F ++ G PD T N+++ L ++G +EA+ + + E G S
Sbjct: 547 RAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCS 602
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 92/232 (39%), Gaps = 36/232 (15%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ R YN +I+ + +D A +QMS+ D TYN LIHG+C +G + A
Sbjct: 425 GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHA 484
Query: 65 LRLVKQMEGLGYAPNVYTYTIL-----------------------------------IDG 89
+ L +M G P++ TY IL IDG
Sbjct: 485 IALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDG 544
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C A + + + + + P+ T ++HG+ + +A +L + E
Sbjct: 545 MCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRD 604
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLV-TGLD 200
+ NT++ ++ A +L++M G+ + ST V L GLD
Sbjct: 605 GCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGLD 656
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 220/459 (47%), Gaps = 8/459 (1%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVK----QMEGLGYAPNVYTYTILIDGFCNAKRVA 97
KPD YNI ++ + V D L+LV+ +M G +V T+ +LI C A ++
Sbjct: 120 KPDTNFYNIALNAL----VEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLR 175
Query: 98 EVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL 157
+LE M + P+E T +L+ G D + A ++ + + L + L+
Sbjct: 176 PAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLV 235
Query: 158 YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK 217
EA + ++ + G+ P+ TF+ V ++N+ I+D I++G
Sbjct: 236 NGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFD 295
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
P TY L+ + K G + L + N +YN +I CK N ++ AT++
Sbjct: 296 PDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDL 355
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
R + + + P++ TFNTLI G C E+ + G KPD+FT++ +ID LC
Sbjct: 356 ARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCY 415
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
R ++AL L EM G N + YN LI LC + + +F +M+ +S T
Sbjct: 416 ERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVT 475
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+N LI C+ ++E+A + M+ GL+PD F+Y++L+ + G ++A +M
Sbjct: 476 YNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMA 535
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
NGC PD +T ++ L + GR + A ++++ + +GI
Sbjct: 536 SNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGI 574
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 132/501 (26%), Positives = 235/501 (46%), Gaps = 5/501 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI +N +I AL K++ + A L ++M+ KPD T+ L+ G G ++ A
Sbjct: 153 GIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGA 212
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ KQM G G + +L++GFC RV E R + + E P++ T SLV+G
Sbjct: 213 LKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNG 272
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + + A +++ +E+ N+L+ + +A IL++M R P
Sbjct: 273 FCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPN 332
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL-YKAGRDVEGDRYL 243
+ T++ ++ L ++ + + +G+ P T+ L++ L +D+ + +
Sbjct: 333 TVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMF- 391
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +Y+++ID C + A + +EM A N V +NTLI G CK
Sbjct: 392 EEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKS 451
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ E+ + G T+N++ID LC+ R E+A + +M+ G+ P+ TY
Sbjct: 452 RRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTY 511
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L+ C +GD+ ++ + Q M ++ PDI+T+ LI CR +++ A K S+
Sbjct: 512 NSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQM 571
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ-QGRFE 482
G+ +Y+ +I+AL R E + F M + PD+ T ++ L G +
Sbjct: 572 KGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQ 631
Query: 483 EAHDIVKTSKERGI--SFKSF 501
EA D E+GI F SF
Sbjct: 632 EAIDFTVEMLEKGILPEFPSF 652
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 204/447 (45%), Gaps = 53/447 (11%)
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
D L+KQ++ G PN T+ LI F N + + ++LE NE +
Sbjct: 72 DSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILE---------NELGFK-- 120
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
P F N L L ++ + KM + G
Sbjct: 121 ---------PDTNF-----------------YNIALNALVEDNKLKLVEMLHSKMVNEGI 154
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+ + STF+ + L L +L+ G+KP T+ LM+ + EGD
Sbjct: 155 VLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIE-----EGD- 208
Query: 242 YLNHVFKDR--------LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
LN K + L++NV S ++++ FCK ++ A E+ + +P+ VTF
Sbjct: 209 -LNGALKMKKQMLGYGCLLTNV-SVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTF 266
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
N+L++G C+ V+ +++ ++E GF PD +T+NS+I +C+ FE A++ L +M+
Sbjct: 267 NSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMIL 326
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
PNT+TYN LI +LC ++ + L + + + + PD+ TFN LIQ C +
Sbjct: 327 RECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDI 386
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A + F M G +PD F+YS LI +L R EA ME +GC ++ N +++
Sbjct: 387 AMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLID 446
Query: 474 TLVQQGRFEEAHDIVKTSKERGISFKS 500
L + R E+A +I + G+S S
Sbjct: 447 GLCKSRRIEDAEEIFDQMELLGVSRSS 473
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 184/376 (48%), Gaps = 37/376 (9%)
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
TLL +L+ +S +L+++ G +P ++TF + ++ IL+ +
Sbjct: 60 TLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN--EL 117
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G KP + Y + + AL + + + + + + +V +V+++N++I CK + + A
Sbjct: 118 GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 177
Query: 275 TEICREMRDRDIAPNLVTFNT-----------------------------------LISG 299
+ EM + + P+ +TF T L++G
Sbjct: 178 ILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNG 237
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK+ V + ++ + E GF PD+ TFNS+++ CR DALD + M+E G P+
Sbjct: 238 FCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPD 297
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
TYN LI +C +G+ +++ + Q+M SP+ T+N LI + C+ N+IE A
Sbjct: 298 VYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLAR 357
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+++ GL PD +++ LI+ L S D A + F M+ GC PD +T ++++++L +
Sbjct: 358 ILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYER 417
Query: 480 RFEEAHDIVKTSKERG 495
R +EA ++K + G
Sbjct: 418 RLKEALMLLKEMESSG 433
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 160/372 (43%), Gaps = 5/372 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN++I + K + A QQM + +C P+ TYN LI +C+ ++ A
Sbjct: 293 GFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAA 352
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + + G P+V T+ LI G C +K + E MK + P+E T L+
Sbjct: 353 TDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDS 412
Query: 125 VFRCLDPH-KAFELLIRFMEREPLTQK-LVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ C + K +L++ ME + +V NTL+ L + +A I +M G
Sbjct: 413 L--CYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVS 470
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
S T++ + L + E ++D I G+KP TY L+ + G +
Sbjct: 471 RSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDI 530
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + + ++ +Y +I C+ +D A+++ R ++ + I +N +I
Sbjct: 531 VQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFM 590
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH-RFEDALDCLSEMVEWGVPPNTI 361
+ L ++E PD T + LC ++A+D EM+E G+ P
Sbjct: 591 RKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFP 650
Query: 362 TYNILIRSLCAI 373
++ L LC++
Sbjct: 651 SFGFLAEGLCSL 662
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 7/194 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ LG+S S+ YN +ID L K+ ++ A QM ++ KPD+FTYN L+ CR+G
Sbjct: 464 MELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGD 523
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++A +V+ M G P+++TY LI G C A RV ++L ++ + +
Sbjct: 524 IEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNP 583
Query: 121 LVHGVFRCLDPHKAFELLIRFMER----EPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
++ +F + L ME+ + LT K+V L + EA +M
Sbjct: 584 VIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGL---CNGGGPIQEAIDFTVEM 640
Query: 177 GDRGYLPESSTFDY 190
++G LPE +F +
Sbjct: 641 LEKGILPEFPSFGF 654
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 129/530 (24%), Positives = 240/530 (45%), Gaps = 70/530 (13%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+SF G +P +Y+ +++A +S + + M C D N++++ IC G
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VDEA+ L++++ G ++ +Y ++ G C AKR +V +++ M + PN T
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF-- 254
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
NTL+ L N + +L +M + G
Sbjct: 255 ---------------------------------NTLIGYLCRNGLFERVHEVLAQMSEHG 281
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ + + + L IL+ G+KP Y +++ L A R E +
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L+ +F+ + ++N+++D FC+ ++DR E+ +M P+++T+ T+I+G
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ + + LL + CG KP+ ++ ++ LC A R+ DA + +S+M++ G PPN
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+T+N LI LC G V +++ L ++M + SPD+ +++ +I + K E+A +
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521
Query: 421 MLTLGLRPDNFSYSALIKALIKSGR-------FDEAKQT--------------------- 452
M+ G+ P+ YS++ AL + GR FD K T
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581
Query: 453 -------FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
F M NGC P+ T ++++ L +G +EA +++ RG
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 200/451 (44%), Gaps = 38/451 (8%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
YN ++ G CR G + + + PN YT+ ++ G C R+A+ VL+ M
Sbjct: 81 AYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
+ P ++ R + +L + CN +L +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
EA +LRK+ F G + +Y +
Sbjct: 198 DEAVGLLRKLA---------------------------------FF--GCEADIVSYNAV 222
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ L A R + + ++ + + N+ ++N +I C+ + +R E+ +M +
Sbjct: 223 LKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGC 282
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P++ + T+I G CK+ + E+L + G KP+ +N+++ LC A R+++A +
Sbjct: 283 TPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
LSEM + P + +T+NIL+ C G V R + L ++M + PD+ T+ +I FC
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC 402
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ I++A SM + G +P+ SY+ ++K L +GR+ +A++ M Q GC P+
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T N ++ L ++G E+A +++K G S
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCS 493
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 210/486 (43%), Gaps = 7/486 (1%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YNA++ ++ + A + V P+ +T+ ++ G+C G + +AL ++ +M
Sbjct: 82 YNAMVAGYCRAGQLAAARRLAAAVPV---PPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR--CLD 130
G AP Y ++++ C + RVLE M + + +++ + C+D
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A LL + + N +L L + ++ +M P TF+
Sbjct: 199 --EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L +L + G P Y +++ + K G + LN +
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
L NV YN V+ C A E+ EM +D + VTFN L+ C++ V +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
ELL +L G PD T+ ++I+ C+ ++A+ L M G PNT++Y I+++ L
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C+ G + L +M P+ TFN LI C+ +E+A + ML G PD
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 496
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
SYS +I L K+G+ +EA + M G +P++ + I L ++GR + +
Sbjct: 497 ISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDN 556
Query: 491 SKERGI 496
K+ I
Sbjct: 557 IKDTTI 562
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 84/178 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ +N +I+ L K ++ A +QM V+ C PD +Y+ +I G+ + G +EA
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+ M G +PN Y+ + RV +V ++ + +K+ + + +++
Sbjct: 516 LELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISS 575
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ + + +A + + + + L+ L++ +A EA +L ++ RG L
Sbjct: 576 LCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 126/497 (25%), Positives = 240/497 (48%), Gaps = 2/497 (0%)
Query: 4 LGISPSTRLY--NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
L I+P+ ++ ++ +LVK N A ++M + D T+NILI+ ++G
Sbjct: 48 LNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHT 107
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
+ + + GY PN T T LI G C ++ + + + N+ +L
Sbjct: 108 HFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTL 167
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++G+ + A +LL R + ++ NT++ + + +EA + +M +G
Sbjct: 168 INGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGI 227
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P+ T+ ++ LN+ G+ + I + P T+ +L++ K GR E
Sbjct: 228 SPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKN 287
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + K + +V +Y ++D +C V +++A I M + N+ ++N +I+G C
Sbjct: 288 VLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFC 347
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K +V + L + PD T+NS+ID LC++ + AL + EM + GVP + I
Sbjct: 348 KIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKI 407
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN ++ +LC V +++ L KM+ + I PD+YT+ LI C+ +++ A+ F +
Sbjct: 408 TYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDL 467
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
L G ++Y+ +I+ + FD+A ME NGC P++ T +I+ +L ++
Sbjct: 468 LVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDEN 527
Query: 482 EEAHDIVKTSKERGISF 498
+ A +++ RG+ F
Sbjct: 528 DMAEKLLREMIARGLLF 544
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 136/281 (48%), Gaps = 2/281 (0%)
Query: 218 PRFSTYLLLMEALYKAGRDVEGD--RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT 275
P+F L L+ +D E N + + + ++ K+N A
Sbjct: 17 PKFIISTSLYSQLHHHHQDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAI 76
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
+ REM IA +LVTFN LI+ + H + + +L+ G++P+ T ++I L
Sbjct: 77 SLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGL 136
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
C + AL ++V G N + Y LI LC +G + +L+L +++ + P++
Sbjct: 137 CLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNV 196
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
+N +I S C++ + +A + M++ G+ PD +YSALI G+ ++A F
Sbjct: 197 VMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNK 256
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M NPD YT +++++ ++GR +EA +++ ++GI
Sbjct: 257 MISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGI 297
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 229/481 (47%), Gaps = 37/481 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P +Y+ +++A + A + + C D N++++ IC G VDEA
Sbjct: 152 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEA 211
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L++ + G P+V +Y ++ G C AKR V ++E M PN T
Sbjct: 212 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTF------ 265
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
NTL+ L N + +L +M + G P+
Sbjct: 266 -----------------------------NTLISYLCRNGLFERVHEVLAQMVEHGCTPD 296
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + L IL+ G+KP Y L++ L A R E + L
Sbjct: 297 IRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 356
Query: 245 HVF-KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+F KD + +V ++N+++D FC+ ++DR E+ +M +R P+++T+ T+I+G CK+
Sbjct: 357 EMFDKDCPLDDV-TFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKE 415
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + LL + CG KP+ ++ ++ LC A R+ DA D +S+M++ G P N IT+
Sbjct: 416 GLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 475
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI LC G V +++ L ++M + SPD+ +++ +I + K ++A + M+
Sbjct: 476 NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 535
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ P+ YS++ AL + GR ++ Q F +++ D+ N ++ +L ++G E
Sbjct: 536 KGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETER 595
Query: 484 A 484
A
Sbjct: 596 A 596
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 211/451 (46%), Gaps = 8/451 (1%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGIC---RIGVVDEALRLVKQ 70
N V++A+ S+D A + + C+PD +YN ++ G+C R G V E L+++
Sbjct: 196 NLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQE---LMEE 252
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M + PN+ T+ LI C V VL M E P+ +++ G+ +
Sbjct: 253 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGH 312
Query: 131 PHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
A E+L R M L +VC NTLL L + E +L +M D+ + TF+
Sbjct: 313 LEVAHEILNR-MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFN 371
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
V ++ +L+ ++RG P TY ++ K G E L +
Sbjct: 372 ILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTAC 431
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
N SY +V+ C A ++ +M + N +TFNTLI+ CK V +
Sbjct: 432 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 491
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
ELL +L G PD +++++ID L +A + ++AL+ L+ MV G+ PNTI Y+ + +
Sbjct: 492 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 551
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
L G + + +++F +Q I D +NA+I S C+ + E+A + M++ G P+
Sbjct: 552 LSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 611
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
+Y+ LI+ L G EA++ + G
Sbjct: 612 ESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 195/450 (43%), Gaps = 3/450 (0%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
YN ++ G CR G ++ A RL + PN YTY ++ C R+A+ VL+ M
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
R P ++ R A +L R CN +L + +
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
EA +LR + G P+ +++ + L +++ ++ P T+ L+
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
L + G L + + ++ Y +ID CK ++ A EI M +
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
PN+V +NTL+ G C +T ELL + + D TFN ++D C+ + ++
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
L +M+E G P+ ITY +I C G + ++ L + M A P+ ++ +++ C
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ AE M+ G + +++ LI L K G ++A + M NGC+PD +
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 509
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ +++ L + G+ +EA +++ +G+S
Sbjct: 510 YSTVIDGLGKAGKTDEALELLNVMVNKGMS 539
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 80/170 (47%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N +I+ L K ++ A +QM V+ C PD +Y+ +I G+ + G DEAL L+ M
Sbjct: 475 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 534
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G +PN Y+ + R+ +V ++ + +++ + + +++ + + +
Sbjct: 535 NKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETE 594
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+A E L + + + L+ L++ EA +L ++ +G L
Sbjct: 595 RAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
++ + LIRSLCA G R+ + + A + +NA++ +CR ++E A +
Sbjct: 57 GSVRLSSLIRSLCAAG---RTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRLA 113
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+ + + P+ ++Y +++AL GR +A M + GC P ++ILE +
Sbjct: 114 AA---VPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRG 170
Query: 479 GRFEEAHDIVKTSKERGISF 498
G F A +++ RG +
Sbjct: 171 GGFRSAVRVLEDLHARGCAL 190
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 123/498 (24%), Positives = 235/498 (47%), Gaps = 6/498 (1%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P + ++ L K + + QM + PD T NIL++ +C + V E L
Sbjct: 93 TPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLA 152
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++ + GY P++ TYT LI G C R+++ + M++ PN T +L+ G+
Sbjct: 153 VMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLC 212
Query: 127 RCLDPHKAFELLIRFMEREPLTQ------KLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
R + A +L + L + + ++ L + EA + +M +G
Sbjct: 213 RTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQG 272
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P ++ + G E + + + +GV+P T+ +L++ L K G+ +E
Sbjct: 273 MTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAK 332
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L + + +V N+ +YN +I+ FC V ++ A E+ M + P+++ + LI+G+
Sbjct: 333 DLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGY 392
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK ++V + +L +L+ G +PD T+ +++ L + + DA M +G+P +
Sbjct: 393 CKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDL 452
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
Y I + LC G + ++ LF K+++ I DI FN LI C+ K+E A + F
Sbjct: 453 YIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEK 512
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+ L+PD +Y+ +I + G+ +A F ME+NGC PD T ++ + +
Sbjct: 513 LPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKK 572
Query: 481 FEEAHDIVKTSKERGISF 498
E+ +++ +R +S
Sbjct: 573 LEKVVELLHMMVQRDVSL 590
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 177/407 (43%), Gaps = 41/407 (10%)
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+AF+ M P LL L+ S+ + +M G P+ T + +
Sbjct: 79 QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKP----------------RFS--------------- 221
CL + E ++ ++RG P R S
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198
Query: 222 ----TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVN------SYNMVIDCFCKVNMM 271
TY LM+ L + G + + D + +N SY+++ID CK
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
D A ++ EM+ + + P ++++ +LI G C + + + L ++ G +P+ TFN +
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVL 318
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
ID LC+ + +A D L M++ G+ PN +TYN LI C +GD+ + LF M +
Sbjct: 319 IDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGC 378
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
PD+ + LI +C+ +K+E+A K + ML +G RPD +Y AL+ L + G+ +AK+
Sbjct: 379 EPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKK 438
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
F M+ G D Y + L L + G EA ++ K I
Sbjct: 439 LFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKL 485
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 167/368 (45%), Gaps = 7/368 (1%)
Query: 2 SFLGIS--PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
S GI+ P Y+ +IDAL K D A F++M V P +Y LIHG C G
Sbjct: 232 SLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGG 291
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+EA RL +M G PNV T+ +LID C +V E +LE+M +R + PN T
Sbjct: 292 KWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYN 351
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGD 178
SL+ G D + A EL + M + ++C T+L S EA + M
Sbjct: 352 SLIEGFCLVGDLNSARELFVS-MPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQ 410
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P+ T+ +T L G + + + G+ Y + + L K G E
Sbjct: 411 VGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFE 470
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
N + + ++ +N +ID CK ++ A E+ ++ ++ P++VT+N +I
Sbjct: 471 AMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIH 530
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
C+ +V K L + + G PDK T+ ++I + + E ++ L MV+ V
Sbjct: 531 EFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDV-- 588
Query: 359 NTITYNIL 366
++ NIL
Sbjct: 589 -SLDVNIL 595
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 225/471 (47%), Gaps = 45/471 (9%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + V+ A+ K N D+ F +M D +++ ILIH CR AL L
Sbjct: 613 PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALAL 672
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LG+ P++ T L++GFC R E +++ M E + PN ++++G+ +
Sbjct: 673 LGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCK 732
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D + A E+ ++ + + NTL+ L N+ ++AA +LR M R P
Sbjct: 733 NRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIF 792
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
F ++DTF+K G LL + LYK +
Sbjct: 793 FT----------------ALIDTFVKEG-------NLLEAKNLYK------------EMI 817
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ + N+ +YN +I+ FC + A + M + P++VT+NTLI+G CK V
Sbjct: 818 RRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 877
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+L + G D FT+N++I C+A + A + MV+ GVPP+ +TYNIL+
Sbjct: 878 DGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILL 937
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G + ++L + + +Q +++ DI T+N +IQ CR +K+++A F S+ G++
Sbjct: 938 DCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVK 997
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP----------DSYTS 468
D +Y +I L ++G EA + M+++G P D YTS
Sbjct: 998 LDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLRDHYTS 1048
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 197/428 (46%), Gaps = 36/428 (8%)
Query: 34 QQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNA 93
QQM + D +++ ILIH CR + AL ++ +M LGY P++ T+ L+ GFC
Sbjct: 89 QQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLR 148
Query: 94 KRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC 153
R+ + F ++ M + PN +L+ + + D + A ELL ++ L LV
Sbjct: 149 NRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVT 208
Query: 154 -NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
NTLL L + +AA ILR M
Sbjct: 209 YNTLLTGLCYSGEWRQAARILRDM-----------------------------------T 233
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
KR + P T+ L++A K G E + + + N +YN +I+ C +
Sbjct: 234 KRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLY 293
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + M + PN+VT+NTLI+G CK V +L + G D FT+N++I
Sbjct: 294 HAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLI 353
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
C+ + A D S MV GV P+ IT+ IL+ LC G++ ++ F M++
Sbjct: 354 HGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKY 413
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
I +N +I C+ +K+E+A + F + G++PD +Y+ +I L K+G EA +
Sbjct: 414 LGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 473
Query: 453 FLSMEQNG 460
F M+++G
Sbjct: 474 FRRMKEDG 481
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 201/436 (46%), Gaps = 1/436 (0%)
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
++AL L +M P+V +T L+ N +R V + M+ + + + L
Sbjct: 47 EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTIL 106
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+H RC A +L + M+ + +LL+ + +A +++ M GY
Sbjct: 107 IHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGY 166
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRG-VKPRFSTYLLLMEALYKAGRDVEGD 240
P ++ + CL D+N +L+ K+G + TY L+ L +G +
Sbjct: 167 EPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAA 226
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
R L + K R+ +V ++ +ID F K +D A E+ ++M I PN VT+N+LI+G
Sbjct: 227 RILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C ++ ++ ++ G P+ T+N++I+ C++ R ED + M G+ +T
Sbjct: 287 CMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDT 346
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
TYN LI C +G + + +F M + ++PDI T L+ C +I A F
Sbjct: 347 FTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFND 406
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M + +Y+ +I L K+ + +EA + F + G PD+ T +++ L + G
Sbjct: 407 MRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 466
Query: 481 FEEAHDIVKTSKERGI 496
EA ++ + KE GI
Sbjct: 467 RREADELFRRMKEDGI 482
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/527 (23%), Positives = 224/527 (42%), Gaps = 36/527 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P + ++ L + I A +KF M + YNI+IHG+C+ V+EA
Sbjct: 376 GVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEA 435
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++ G P+ TYTI+I G C E + MKE + HG
Sbjct: 436 WELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAEDGHLGEHG 495
Query: 125 VFRCLDPHKAFELLI-------RFMEREPLTQKLVCNTL---LYRLSNNSMASEAAAILR 174
+ + +I ME L TL L L + +S +R
Sbjct: 496 T----NNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSSVKGFVR 551
Query: 175 K---MGDRGYLPESSTFDYTVTCLVTG---------------LDLNETCGILDTFIKRGV 216
+ + +RG PES +F + ++ G+ ++
Sbjct: 552 RHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQSRP 611
Query: 217 KPRFSTYLLLMEALYKAGR-DVEGDRYLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRA 274
P + ++ A+ K + D+ YL H ++ +S ++ S+ ++I CFC+ + A
Sbjct: 612 IPSIVDFTRVLTAIAKMNKFDIV--IYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLA 669
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ +M P++VT +L++G C+ + L+ + E G +P+ +N++I+
Sbjct: 670 LALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVING 729
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LC+ +AL+ M + G+ + +TYN LI LC G + RL + M +I P+
Sbjct: 730 LCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPN 789
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+ F ALI +F + + +A+ + M+ + P+ +Y++LI GR +AK F
Sbjct: 790 VIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFD 849
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
M GC PD T N ++ + R E+ + +G+ +F
Sbjct: 850 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAF 896
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 123/551 (22%), Positives = 221/551 (40%), Gaps = 61/551 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN +I+ KS ++ FQ+M + D FTYN LIHG C++G + A
Sbjct: 306 GCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVA 365
Query: 65 LRLVKQMEGLGYAPNVYT-----------------------------------YTILIDG 89
+ M G P++ T Y I+I G
Sbjct: 366 KDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHG 425
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C A +V E + + + V P+ T ++ G+ + P + + L R M+ + +
Sbjct: 426 LCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKN-GPRREADELFRRMKEDGIIC 484
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRK-------MGDRGYLPESSTFDYTVTCLVTGLDLN 202
+ L +NN ++ I K GD Y +T ++ L+ +
Sbjct: 485 QAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSS 544
Query: 203 ETCGILD---TFIKRGVKPRFSTY------------LLLMEALYKAGRDVEGDRYLN--- 244
G + ++RG P ++ E L ++ D
Sbjct: 545 SVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFC 604
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + R + ++ + V+ K+N D + +M + I+ +L +F LI C+ +
Sbjct: 605 EMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCS 664
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
LL +++ GF+P T S+++ C+ +RF++A+ + M E G+ PN + YN
Sbjct: 665 RFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYN 724
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I LC D+ +L +F M+ I D T+N LI C + A + M+
Sbjct: 725 TVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKR 784
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ P+ ++ALI +K G EAK + M + +P+ T N ++ QGR +A
Sbjct: 785 KIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDA 844
Query: 485 HDIVKTSKERG 495
+ +G
Sbjct: 845 KHMFDLMVSKG 855
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 135/246 (54%), Gaps = 1/246 (0%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
S+ ++I CFC+ + + A I +M P++VTF +L+ G C +H L+ +
Sbjct: 102 SFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASM 161
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG-VPPNTITYNILIRSLCAIGD 375
++ G++P+ +N++IDCLC+ AL+ L+EM + G + + +TYN L+ LC G+
Sbjct: 162 VKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGE 221
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
++ R+ + M RI+PD++TF ALI +F + +++A++ + ML + P+ +Y++
Sbjct: 222 WRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNS 281
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
LI L GR AK+TF M GC P+ T N ++ + R E+ + + G
Sbjct: 282 LINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREG 341
Query: 496 ISFKSF 501
+ +F
Sbjct: 342 LVGDTF 347
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 164/367 (44%), Gaps = 4/367 (1%)
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
+RS +H C+ AF L ++ P+ + +L ++ + + KM
Sbjct: 587 LRSELH----CIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKME 642
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
+ G + +F + C + +L +K G +P T L+ + R
Sbjct: 643 NLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQ 702
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E ++ + + L NV YN VI+ CK ++ A EI M + I + VT+NTLI
Sbjct: 703 EAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLI 762
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
SG C LL +++ P+ F ++ID + +A + EM+ V
Sbjct: 763 SGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVH 822
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
PN +TYN LI C G + + +F M + PD+ T+N LI FC+ ++E K
Sbjct: 823 PNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 882
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F M GL D F+Y+ LI ++G+ + A++ F M G PD T N++L+ L
Sbjct: 883 FCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCN 942
Query: 478 QGRFEEA 484
G+ E+A
Sbjct: 943 NGKIEKA 949
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 181/435 (41%), Gaps = 35/435 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGIS + +I + + LA +M +P T L++G C+ E
Sbjct: 644 LGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQE 703
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ LV M LG PNV Y +I+G C + + + M+++ + + T +L+
Sbjct: 704 AVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLIS 763
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G L N+ ++AA +LR M R P
Sbjct: 764 G-----------------------------------LCNSGRWTDAARLLRDMVKRKIDP 788
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
F + V +L E + I+R V P TY L+ GR +
Sbjct: 789 NVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMF 848
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +V +YN +I FCK ++ ++ EM + + + T+NTLI G+C+
Sbjct: 849 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQA 908
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+++ +++ +++CG PD T+N ++DCLC + E AL + ++ + + + ITY
Sbjct: 909 GKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITY 968
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI+I+ +C V + LF+ + + D + +I CR +A+K M
Sbjct: 969 NIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKE 1028
Query: 424 LGLRPDNFSYSALIK 438
G P Y ++
Sbjct: 1029 DGFMPSERIYDETLR 1043
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 158/341 (46%), Gaps = 14/341 (4%)
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
S A A+L KM G+ P T + G E ++D+ + G++P Y +
Sbjct: 667 SLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTV 726
Query: 227 MEALYKAGRDVEGDRYLNHVF-------KDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
+ L K +R LN+ K +V++ +YN +I C A + R
Sbjct: 727 INGLCK-------NRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLR 779
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
+M R I PN++ F LI K+ + + + L ++ P+ T+NS+I+ C
Sbjct: 780 DMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQG 839
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
R DA MV G P+ +TYN LI C V ++LF +M + D +T+N
Sbjct: 840 RLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYN 899
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI +C+ K+ A+K F M+ G+ PD +Y+ L+ L +G+ ++A +++N
Sbjct: 900 TLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKN 959
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+ D T N+I++ + + + +EA + ++ +G+ +
Sbjct: 960 QMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDA 1000
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/524 (22%), Positives = 217/524 (41%), Gaps = 42/524 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P + A+IDA VK ++D A ++QM P+ TYN LI+G+C G + A
Sbjct: 237 INPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAK 296
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M G PNV TY LI+GFC ++RV + ++ + M + + T +L+HG
Sbjct: 297 KTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGY 356
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCN-TLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + + + +M +T ++ + LL+ L N A M
Sbjct: 357 CQ-VGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLG 415
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + L + E + GVKP TY +++ L K G E D
Sbjct: 416 IVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFR 475
Query: 245 HVFKDRLV-------------SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
+ +D ++ +N S +I C + + + ++ D + +LV
Sbjct: 476 RMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLV 535
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN-------------------SMI 332
+ S V + ++LLE G P+ +F+ S +
Sbjct: 536 GLIPIASSSSVKGFVRRH----LLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSEL 591
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
C+ +F+DA EM++ P+ + + ++ ++ + + LF KM+ IS
Sbjct: 592 HCI----KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGIS 647
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
D+Y+F LI FCR ++ A M+ LG +P + +L+ + RF EA
Sbjct: 648 HDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSL 707
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
SM + G P+ N ++ L + A +I +++GI
Sbjct: 708 VDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGI 751
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 168/422 (39%), Gaps = 36/422 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ GIS + +I + + + LA +M P T+ L+HG C
Sbjct: 91 MELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNR 150
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ +A LV M GY PNV Y LID C
Sbjct: 151 IHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNG-------------------------- 184
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDR 179
D + A ELL ++ L LV NTLL L + +AA ILR M R
Sbjct: 185 ---------DVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKR 235
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
P+ TF + V +L+E + ++ + P TY L+ L GR
Sbjct: 236 RINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHA 295
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + + NV +YN +I+ FCK ++ ++ + M + + T+NTLI G
Sbjct: 296 KKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHG 355
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+C+ ++ +++ ++ CG PD T ++ LC A+ ++M
Sbjct: 356 YCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLG 415
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+ YNI+I LC V + LF ++ + + PD T+ +I C+ +A++ F
Sbjct: 416 IVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFR 475
Query: 420 SM 421
M
Sbjct: 476 RM 477
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 137/282 (48%)
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G+ ++ +L+ + R L + K ++ + +++ FC+ N A
Sbjct: 645 GISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEA 704
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ M + + PN+V +NT+I+G CK+ +++ E+ + + G D T+N++I
Sbjct: 705 VSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISG 764
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LC + R+ DA L +MV+ + PN I + LI + G++ + L+++M + P+
Sbjct: 765 LCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPN 824
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
I T+N+LI FC ++ A+ F M++ G PD +Y+ LI KS R ++ + F
Sbjct: 825 ILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 884
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M G D++T N ++ Q G+ A + + G+
Sbjct: 885 EMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 926
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 102/500 (20%), Positives = 179/500 (35%), Gaps = 67/500 (13%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN ++ L S A + M+ + PD FT+ LI + G +DEA L KQM
Sbjct: 209 YNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQML 268
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
PN TY LI+G C R+ + ++M + PN T +L++G +
Sbjct: 269 QSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVE 328
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+L R + NTL++ A I F + V
Sbjct: 329 DGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDI---------------FSWMV 373
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+C GV P T+ +L+ L G N +
Sbjct: 374 SC--------------------GVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKY 413
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+ +YN++I CK + ++ A E+ + + P+ T+ +I G CK+ + EL
Sbjct: 414 LGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 473
Query: 313 LVMLLECGF-------------KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ E G ++ + ++I C R ++ D + + +
Sbjct: 474 FRRMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSS 533
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL---------------IQS 404
+ + S G V R L L ++ +P+ +F+ ++S
Sbjct: 534 LVGLIPIASSSSVKGFVRRHLLLLERGN----NPESRSFSGASHHHHHHHHHHYRERLRS 589
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
K + A F ML P ++ ++ A+ K +FD F ME G + D
Sbjct: 590 ELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHD 649
Query: 465 SYTSNLILETLVQQGRFEEA 484
Y+ +++ + RF A
Sbjct: 650 LYSFTILIHCFCRCSRFSLA 669
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 138/335 (41%), Gaps = 41/335 (12%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ +YN VI+ L K+ ++ A F M D TYN LI G+C G +
Sbjct: 714 LGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTD 773
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A RL++ M PNV +T LID F + E + + M R+V PN T SL++
Sbjct: 774 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLIN 833
Query: 124 GV---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
G R D F+L++ + + NTL+ + + + +M +G
Sbjct: 834 GFCIQGRLGDAKHMFDLMV---SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQG 890
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ ++ T++ + LN + + + GV P TY +L++ L G+ +
Sbjct: 891 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKAL 950
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCK--------------------------VNMMD-- 272
+ + K+++ ++ +YN++I C+ + M+
Sbjct: 951 VMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGL 1010
Query: 273 -------RATEICREMRDRDIAPNLVTFNTLISGH 300
A ++C M++ P+ ++ + H
Sbjct: 1011 CRNGLRREADKLCTRMKEDGFMPSERIYDETLRDH 1045
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 76/156 (48%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
RFEDALD EMV+ P+ + + L+ ++ + + Q+M+ IS D+Y+F
Sbjct: 45 RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFT 104
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI FCR +++ A M+ LG P ++ +L+ R +A SM ++
Sbjct: 105 ILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKS 164
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G P+ N +++ L + G A +++ +++G
Sbjct: 165 GYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKG 200
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 136/490 (27%), Positives = 226/490 (46%), Gaps = 2/490 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P R N ++ L KS + L F M P FTYN++I +C+ G ++ + RL
Sbjct: 193 PKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRL 252
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
QM +G +P+V TY LIDG+ + EV + MK+ P+ T L++ +
Sbjct: 253 FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK 312
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+AFE M+ L +V +TL+ M A +L M G LP
Sbjct: 313 FEKMPRAFEYFSE-MKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEF 371
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + +L E +L+ ++ GVK TY L++ L KAGR +E + +
Sbjct: 372 TYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM 431
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
KD + N Y ++ + K M+ A +I ++M + +I P+L+ + ++I GHC ++
Sbjct: 432 LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL 491
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+T+ +L + G + ++ID +A + DAL+ EM + GV +TY +L
Sbjct: 492 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVL 551
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I LC G V ++ F +M + + P++ + +LI C N IE A+K F M G+
Sbjct: 552 IDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGM 611
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
PD +++ALI +K G EA M + D + ++ Q G +A
Sbjct: 612 TPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARK 671
Query: 487 IVKTSKERGI 496
E+GI
Sbjct: 672 FFNEMIEKGI 681
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 182/393 (46%), Gaps = 1/393 (0%)
Query: 105 IMKERNVCPNEATVRSLVHGVFRCLDP-HKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
+ RN+C + + V ++ VF L +A E R L + CN LL+RLS +
Sbjct: 149 LWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKS 208
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
M G P T++ + L DL + + + G+ P TY
Sbjct: 209 GNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTY 268
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
L++ K G E N + V ++ +YN +I+C+CK M RA E EM++
Sbjct: 269 NSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKN 328
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
+ PN+VT++TLI CK+ + +LL + G P++FT+ S+ID C+A +
Sbjct: 329 NGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTE 388
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A L++M++ GV N +TY L+ LC G + + +F+ M D ISP+ + AL+
Sbjct: 389 AWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVH 448
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ + ++E A K M ++PD Y ++I + +E K M+ G +
Sbjct: 449 GYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISA 508
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ S I++ + G+ +A + + ++ G+
Sbjct: 509 NPVISTTIIDAYFKAGKSSDALNFFQEMQDVGV 541
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/496 (24%), Positives = 204/496 (41%), Gaps = 35/496 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP YN++ID K S++ F +M C PD TYN LI+ C+ +
Sbjct: 259 MGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPR 318
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +M+ G PNV TY+ LID FC + ++L M+ + PNE T SL+
Sbjct: 319 AFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLID 378
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +A++LL ++ + LL L EA + R M
Sbjct: 379 ANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM------- 431
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+K G+ P Y L+ KA R + + L
Sbjct: 432 ----------------------------LKDGISPNQQVYTALVHGYIKAERMEDAMKIL 463
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + ++ Y +I C ++ I EM+ R I+ N V T+I + K
Sbjct: 464 KQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKA 523
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + + G + T+ +ID LC A E A+D M+ G+ PN Y
Sbjct: 524 GKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVY 583
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI LC + + +LF +MQ ++PDI F ALI + +++A M
Sbjct: 584 TSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTE 643
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
L + D Y++L+ + G +A++ F M + G P+ +L ++G+ +E
Sbjct: 644 LAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDE 703
Query: 484 AHDIVKTSKERGISFK 499
A ++ + SF+
Sbjct: 704 AIELKNEMERMAYSFE 719
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 123/525 (23%), Positives = 210/525 (40%), Gaps = 70/525 (13%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
+ +++ + V+ ++ A F +M + P + N L+H + + G +
Sbjct: 159 GSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFF 218
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
M G G AP+V+TY ++ID C + R+ M+E + P+ T SL+ G +
Sbjct: 219 NDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKV 278
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
E A++ +M D G +P+ T+
Sbjct: 279 -----------------------------------GSLEEVASLFNEMKDVGCVPDIITY 303
Query: 189 DYTVTCLV-----------------TGLDLNET--CGILDTFIKRGVK------------ 217
+ + C GL N ++D F K G+
Sbjct: 304 NGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRR 363
Query: 218 ----PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
P TY L++A KAG E + LN + + + N+ +Y ++D CK M
Sbjct: 364 TGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIE 423
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A E+ R M I+PN + L+ G+ K + ++L + EC KPD + S+I
Sbjct: 424 AEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIW 483
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
C + E+ L EM G+ N + +I + G + +L FQ+MQ +
Sbjct: 484 GHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEA 543
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
I T+ LI C +E A F ML+LGL+P+ Y++LI L + + AK+ F
Sbjct: 544 TIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLF 603
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
M+ G PD +++ ++ G +EA ++ E I F
Sbjct: 604 DEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEF 648
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 117/489 (23%), Positives = 244/489 (49%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P + ++ +L+K+ A QQM + KPD T N+L++ ++G + + +
Sbjct: 56 PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ GY P+ T+TILI G C V + + + + ++ + +L++G+ R
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ A +LL R + ++ +T++ + + + ++A + +M + P+ T
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ ++ L + + I + P T+ +L++ K G+ E L +
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K + +V +YN ++D +C V +++A + M R + P++ +++ +I+G CK V
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVD 355
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ +L + P+ T+NS++D LC++ R AL+ + EM + G P N ITYN ++
Sbjct: 356 EAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSIL 415
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
++C V +++ L K++ I PDI+T+ LI C++ +++ A+K F +L G
Sbjct: 416 DAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYS 475
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P+ ++Y++LI G FDE M+ NGC P++ T +++ +L ++ ++A +
Sbjct: 476 PNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKL 535
Query: 488 VKTSKERGI 496
++ RG+
Sbjct: 536 LREMIARGL 544
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 135/285 (47%), Gaps = 8/285 (2%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P+ ++ +ID K + A M K D TYN L+ G C + V++A
Sbjct: 264 INPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAK 323
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L M G P+V++Y+I+I+GFC K V E ++ E M + + PN T SLV G+
Sbjct: 324 SLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGL 383
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ A EL+ +R + + N++L + N+ +A +L K+ ++G P+
Sbjct: 384 CKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPD- 442
Query: 186 STFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
F YTV L+ GL L++ + + + +G P TY L+ G EG
Sbjct: 443 -IFTYTV--LINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLA 499
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
L+ + + + N +Y ++I + + D+A ++ REM R +
Sbjct: 500 MLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 121/497 (24%), Positives = 240/497 (48%), Gaps = 6/497 (1%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+PS +N ++ L K + + QM + DR T NIL++ +C + + E
Sbjct: 66 TPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFA 125
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+ GY+PN+ TY LI G C R++E R+ M++ P+ T +L+ G+
Sbjct: 126 AFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLC 185
Query: 127 RCLDPHKAFEL---LIRFMEREPLTQK---LVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + A +L ++ + R + K + N ++ L EA + +M +G
Sbjct: 186 GTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQG 245
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P +++ + E+ +LD + +G++P T+ +L++ L K G+ +E
Sbjct: 246 MIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAK 305
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L + + +V ++ +YN +I+ FC V ++ A E+ M + P+++++N LI+G+
Sbjct: 306 KLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGY 365
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K +V + +L +L G +P+ T++S++ + A + +DA S M G+ N+
Sbjct: 366 SKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENS 425
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
TY I + LC + +++LF ++++ +I N LI C+ K+E A + F
Sbjct: 426 YTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEK 485
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+ G P+ +Y+ +I + G+ D+A ME NGC PD T N ++ + +
Sbjct: 486 LSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNK 545
Query: 481 FEEAHDIVKTSKERGIS 497
EE ++ ++ +S
Sbjct: 546 LEEVVQLLHRMAQKDVS 562
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 210/451 (46%), Gaps = 8/451 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP+ YN +I L + I A F +M C PD TY LI G+C G ++ A
Sbjct: 134 GYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIA 193
Query: 65 LRLVKQMEG------LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
L+L ++M + PNV TY I++DG C R E ++ E MK + + P+ +
Sbjct: 194 LKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISY 253
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMG 177
SL+HG F C + + L+ M + L +V N L+ L EA +L M
Sbjct: 254 NSLIHG-FCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMI 312
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
+ G +P+ T++ + DLN + + +G +P +Y +L+ K +
Sbjct: 313 ESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVE 372
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E + N + NV +Y+ ++ +D A ++ M+ IA N T+ +
Sbjct: 373 EAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFL 432
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G CK+ + + +L L FK + N +ID LC+A + E A + ++ G
Sbjct: 433 DGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHE 492
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
PN +TY I+I C G V ++ L QKM+A+ +PDI T+N L++ F NK+E+ +
Sbjct: 493 PNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQL 552
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
M + PD + S ++ L K ++ E
Sbjct: 553 LHRMAQKDVSPDAITCSIVVDMLSKDEKYQE 583
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 189/395 (47%), Gaps = 6/395 (1%)
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT 155
+M P+ ++ L+ G+ + + F L + + + N
Sbjct: 50 ATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNI 109
Query: 156 LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRG 215
LL L N + E A + RGY P T++ + L ++E + K G
Sbjct: 110 LLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG 169
Query: 216 VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD------RLVSNVNSYNMVIDCFCKVN 269
P TY L++ L G + + D NV +YN+++D CKV
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
D A ++ EM+ + + P+++++N+LI G C + +++ LL +L+ G +PD TFN
Sbjct: 230 REDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFN 289
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+ID LC+ + +A L M+E G+ P+ +TYN LI C +GD+ + LF M +
Sbjct: 290 VLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSK 349
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
PD+ ++N LI + + K+E+A K + ML +G RP+ +Y +L+K + +G+ D+A
Sbjct: 350 GCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDA 409
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
K+ F M+ +G +SYT + L+ L + EA
Sbjct: 410 KKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEA 444
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 178/374 (47%), Gaps = 11/374 (2%)
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
F L++R L+ N LL L+ S+ ++ +M G + T + + C
Sbjct: 57 FHLMMRSTPTPSLSS---FNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNC 113
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
L L E ++RG P TY L++ L R E R + K +
Sbjct: 114 LCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPD 173
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIA-------PNLVTFNTLISGHCKDAEVH 307
V +Y +I C ++ A ++ +EM + DI+ PN++T+N ++ G CK
Sbjct: 174 VVTYGTLIKGLCGTGNINIALKLHQEMLN-DISRYEINCKPNVITYNIIVDGLCKVGRED 232
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ ++L + G P ++NS+I C A ++E++ L EM++ G+ P+ +T+N+LI
Sbjct: 233 EAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLI 292
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+LC G V + +L M I PD+ T+N+LI+ FC + + A + F SM + G
Sbjct: 293 DTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCE 352
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD SY+ LI K+ + +EA + + M G P+ T + +L+ + G+ ++A +
Sbjct: 353 PDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKL 412
Query: 488 VKTSKERGISFKSF 501
K GI+ S+
Sbjct: 413 FSVMKAHGIAENSY 426
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 153/330 (46%), Gaps = 6/330 (1%)
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
+ N A+ A M P S+F++ ++ L ++ + + G+
Sbjct: 45 TGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDR 104
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
T +L+ L R EG + + N+ +YN +I C + + AT +
Sbjct: 105 CTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLR 164
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL------ECGFKPDKFTFNSMIDC 334
M+ P++VT+ TLI G C ++ +L +L E KP+ T+N ++D
Sbjct: 165 MQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDG 224
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LC+ R ++A EM G+ P+ I+YN LI C G S RL +M + PD
Sbjct: 225 LCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPD 284
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+ TFN LI + C+ K+ +A+K M+ G+ PD +Y++LI+ G + A++ F+
Sbjct: 285 MVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFV 344
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
SM GC PD + N+++ + + EEA
Sbjct: 345 SMPSKGCEPDVISYNVLINGYSKTLKVEEA 374
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 75/128 (58%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N +ID L K+ ++ A+ F+++S + +P+ TY I+IHG CR G VD+A L+++ME
Sbjct: 464 NCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEA 523
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G P++ TY L+ GF + ++ EV ++L M +++V P+ T +V + + +
Sbjct: 524 NGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQE 583
Query: 134 AFELLIRF 141
LL RF
Sbjct: 584 CLHLLPRF 591
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 84/171 (49%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ ++ Y +D L K++ + A F ++ K + N LI G+C+ G ++ A
Sbjct: 420 GIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETA 479
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +++ G+ PNV TYTI+I GFC +V + +++ M+ P+ T +L+ G
Sbjct: 480 WELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRG 539
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
+ + +LL R +++ + C+ ++ LS + E +L +
Sbjct: 540 FYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPR 590
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 140/507 (27%), Positives = 230/507 (45%), Gaps = 50/507 (9%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNI-------LIHGICRIGVVDEAL 65
Y V++AL K+ + Q + CK R + + L+ CR + EA
Sbjct: 197 YRTVVNALCKNGFV-------QAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAF 249
Query: 66 RLVKQM-EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R+ ++M + PN TY+ILI G C A R+ E F++ + M E+ P+ T L+
Sbjct: 250 RVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKA 309
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
KA ++L + + L+ RL EA + RKM G P
Sbjct: 310 KCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPG 369
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + + +L K KP TY LME L + + + L
Sbjct: 370 IITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLR 429
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
V + L+ + +YN+++D FCK ++ A I M + P+ TF LI G CK
Sbjct: 430 RVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLG 489
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMID----------------------CLCRAHRFE 342
+ + +L +++ G D+ TF ++ID CL AH F
Sbjct: 490 RLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFN 549
Query: 343 DALDCLSE-------------MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
LD L + M+++G+ P+ +T+ ILI C G+ A SL++ ++M+
Sbjct: 550 CFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQA 609
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
SP++YT+ +I C ++E+AE FSM + G+ P++F+Y+ L+KA +K+GR D A
Sbjct: 610 GCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRA 669
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLV 476
Q +M +NGC P+S+ + +L V
Sbjct: 670 FQIVSTMVKNGCQPNSHIYSALLSGFV 696
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 231/499 (46%), Gaps = 1/499 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG S Y+ ++ L K N +A+L +++M + Y +++ +C+ G V
Sbjct: 153 LGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQA 212
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM-KERNVCPNEATVRSLV 122
A ++ LG+ + + T L+ C + E FRV E M KE N PN T L+
Sbjct: 213 AEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILI 272
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
HG+ +AF+L +E+ L+ + M +A +L +M + +
Sbjct: 273 HGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACV 332
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T+ + L + E G+ +K G+ P T+ L+ K G V +
Sbjct: 333 PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 392
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L+ + K N+ +YN +++ C+V+ +A + R + D + P+ VT+N L+ G CK
Sbjct: 393 LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCK 452
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ +++ + + G +PD FTF ++ID LC+ R E A L MV+ G+ + +T
Sbjct: 453 EGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVT 512
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+ LI C IG LF+ M +R +TFN + + + K+ +A M+
Sbjct: 513 FTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMM 572
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
GL P +++ LI+ ++G + + M+Q GC+P+ YT +I+ L GR E
Sbjct: 573 KYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVE 632
Query: 483 EAHDIVKTSKERGISFKSF 501
EA I+ + G+S F
Sbjct: 633 EAETILFSMSSFGVSPNHF 651
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 223/488 (45%), Gaps = 22/488 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PSTR Y +I A D A +M+ C P+ TY ILI +CR G ++EA
Sbjct: 295 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 354
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++M G P + T+ LI+G+C V F++L +M++ N PN T L+ G
Sbjct: 355 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 414
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R +KAF LL R ++ L ++ N L+ + A I M G P+
Sbjct: 415 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 474
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + L L + GIL + +K+G+ T+ L++ K G+ +
Sbjct: 475 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE 534
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
++ ++R ++ +++N +D K ++ A + +M + P++VT LI GHC+
Sbjct: 535 NMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAG 594
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E + ++L + + G P+ +T+ +I+ LC R E+A L M +GV PN TY
Sbjct: 595 ETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYA 654
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+L+++ G + R+ ++ M + P+ + ++AL+ F N A +A S L
Sbjct: 655 VLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGA-RALSSTGDL 713
Query: 425 GLR---------------------PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
R P Y+ L+ L K GR EA Q M ++G P
Sbjct: 714 DARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFP 773
Query: 464 DSYTSNLI 471
D S++I
Sbjct: 774 DKAISSII 781
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 204/468 (43%), Gaps = 23/468 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P +NA+I+ K + A+ M CKP+ TYN L+ G+CR+ +A
Sbjct: 365 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 424
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++++ G P+ TY IL+DGFC ++ F + M + P+ T +L+ G
Sbjct: 425 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 484
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A +L +++ ++ L+ A + + M + L
Sbjct: 485 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTT 544
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ TF+ + L LNE +L +K G+ P T+ +L+E +AG + L
Sbjct: 545 AHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLE 604
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + NV +Y ++I+ C ++ A I M ++PN T+ L+ H K
Sbjct: 605 RMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAG 664
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCL--------CRAHRFEDALD---------- 346
+ + +++ +++ G +P+ +++++ RA LD
Sbjct: 665 RLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEEND 724
Query: 347 --CLS-EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
CLS E+ + GVP + YN L+ LC G + + +L Q M + PD +++I+
Sbjct: 725 NNCLSNEIKKCGVPTEDL-YNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIE 782
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
+C+ K + + +L P SY +I L GR EA++
Sbjct: 783 HYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQK 830
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/403 (21%), Positives = 158/403 (39%), Gaps = 56/403 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN ++D K +++A+ F M+ +PD FT+ LI G+C++G +++A
Sbjct: 435 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 494
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER--------------- 109
++ M G + + T+T LIDG C + +V + E M E
Sbjct: 495 NGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDA 554
Query: 110 --------------------NVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
+ P+ T L+ G R + + ++L R +
Sbjct: 555 LGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 614
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
++ L NN EA IL M G P T+ V V L+ I+
Sbjct: 615 VYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVS 674
Query: 210 TFIKRGVKPRFSTYLLLME------------ALYKAG----RDVEGDRYLNHVFKDRL-- 251
T +K G +P Y L+ AL G R + + N+ + +
Sbjct: 675 TMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKK 734
Query: 252 --VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
V + YN ++ CK + A ++ ++M + P+ +++I +CK +
Sbjct: 735 CGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNC 793
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
E + ++L+ F P ++ +I L R ++A +S++V
Sbjct: 794 LEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 836
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 42/247 (17%)
Query: 296 LISGHCKDAE--VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
L+ C+D+E V K L + E GF+ +++++ CL + + A MV
Sbjct: 128 LLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVN 187
Query: 354 WGVPPNTITYNILIRSLCAIG-----------------------------------DVAR 378
G I Y ++ +LC G D+
Sbjct: 188 EGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGE 247
Query: 379 SLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+ R+F+KM + + P+ T++ LI C ++E+A + M+ G +P +Y+ LI
Sbjct: 248 AFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 307
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
KA G D+A + M C P+ +T ++++ L ++G+ EEA+ + + + G+
Sbjct: 308 KAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLC 367
Query: 498 FKSFPGL 504
PG+
Sbjct: 368 ----PGI 370
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 129/488 (26%), Positives = 225/488 (46%), Gaps = 5/488 (1%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y A+I AL K+ +D + ++ +P TYN+L+ +C+ G V+EA RL +ME
Sbjct: 224 YTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRME 283
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G P+V T+ ILI+G +R EV VL+ M++ V PNE L+ + C H
Sbjct: 284 QGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIG--WHCRKGH 341
Query: 133 --KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A L + ++ + N + L A IL M G F+
Sbjct: 342 CSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNT 401
Query: 191 TVTCLVTGLD-LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
V L+ L I + + RG++P M L K G+ E
Sbjct: 402 VVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNK 461
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
L N+ + N +I C+ M AT++ + M ++ I + +T+N +I G CKD+++ +
Sbjct: 462 GLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEA 521
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+L + GFKPD FTFN+++ C + E+ L +M G+ P+ ++Y +I
Sbjct: 522 IKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDG 581
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
C D+ ++ ++ + P+++ +NALI + R I A A +M + G++P
Sbjct: 582 HCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPT 641
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
N +Y +L+ + +G +EAK F +N + ++++ + G+ EA +
Sbjct: 642 NVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFE 701
Query: 490 TSKERGIS 497
+ RGIS
Sbjct: 702 EMRSRGIS 709
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/499 (22%), Positives = 224/499 (44%), Gaps = 36/499 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN ++DAL KS ++ A+ +M P T+ ILI+G+ R E
Sbjct: 251 GLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEV 310
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++++ME LG +PN Y LI C ++ R+ + M + + P T +
Sbjct: 311 GIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKA 370
Query: 125 VFRCLDPHKA------------------FELLIRFMERE--------PLTQKLVCNTL-- 156
+ + + +A F ++ ++ + +T ++V +
Sbjct: 371 LCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRP 430
Query: 157 --------LYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
+ L EA I K ++G +T + + L G + E ++
Sbjct: 431 NDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVI 490
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
T + +G++ TY +++ K + E + + + ++ ++N ++ +C +
Sbjct: 491 QTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNL 550
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
M+ + +M+ + P++V++ T+I GHCK ++ K +E L L++ G KP+ F +
Sbjct: 551 GKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIY 610
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N++I R A+D + M G+ P +TY L+ +C G V + +F + +
Sbjct: 611 NALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARE 670
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ + + + +IQ +C++ K+ +A F M + G+ P+ +Y+ L+ A KSG +E
Sbjct: 671 NNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEE 730
Query: 449 AKQTFLSMEQNGCNPDSYT 467
A + F M +G PD+ T
Sbjct: 731 ASKLFDEMVGSGVIPDNIT 749
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/446 (21%), Positives = 187/446 (41%), Gaps = 36/446 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+SP+ +YN +I + A F +M + + KP TYN++ +C+ G ++
Sbjct: 320 LGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMER 379
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCN-AKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A R+++ M +G + + ++ +R+ V + M R + PN+ + + +
Sbjct: 380 AERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACM 439
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ + +A + + + + N L++ L EA +++ M ++G
Sbjct: 440 RELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIE 499
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+S T++ + + E + +RG KP T+ L+ A G+ E
Sbjct: 500 LDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHL 559
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L+ + + L ++ SY +ID CK + +A E E+ DR + PN+ +N LI G+ +
Sbjct: 560 LDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGR 619
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS------------- 349
+ ++ + + + G +P T+ S++ +C A E+A S
Sbjct: 620 NGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIG 679
Query: 350 ----------------------EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
EM G+ PN +TY L+ + G+ + +LF +M
Sbjct: 680 YTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMV 739
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEK 413
+ PD T+ LI +N ++K
Sbjct: 740 GSGVIPDNITYGTLIARCSEVNSLDK 765
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 152/357 (42%), Gaps = 40/357 (11%)
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTF---IKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+ + D+ + +T C D F RG P T +EAL +AG+
Sbjct: 147 TPSSDFLIHTFITSPAQGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAARE 206
Query: 242 YLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + R V+ N SY +I CK +D E+ E+ + P +VT+N L+
Sbjct: 207 VFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDAL 266
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK V + L + + G P TF +I+ L R RF + L EM + GV PN
Sbjct: 267 CKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNE 326
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ YN LI C G +++LRLF +M ++ P T+N + ++ C+ ++E+AE+
Sbjct: 327 VIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILED 386
Query: 421 MLTL------------------------------------GLRPDNFSYSALIKALIKSG 444
ML++ G+RP++ +A ++ L K G
Sbjct: 387 MLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGG 446
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ EA + G + TSN ++ L + +EA +++T +GI S
Sbjct: 447 KHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSI 503
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 159/369 (43%), Gaps = 37/369 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG++ +T NA+I L + + A Q M + D TYNI+I G C+ ++E
Sbjct: 463 LGVNLATS--NALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEE 520
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A++L M G+ P+++T+ L+ +CN ++ E F +L+ MK + P+ + +++
Sbjct: 521 AIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIID 580
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + D KA E L M+R L N +Y A++ G G
Sbjct: 581 GHCKAKDIRKAKEYLTELMDR-----GLKPNVFIYN-----------ALIGGYGRNG--- 621
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
D++ ++T G++P TY LM + AG E
Sbjct: 622 ----------------DISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIF 665
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ ++ + V Y ++I +CK+ M A EMR R I+PN +T+ TL+ + K
Sbjct: 666 SQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKS 725
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ +L ++ G PD T+ ++I + + + +E+ + + Y
Sbjct: 726 GNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMY 785
Query: 364 NILIRSLCA 372
NIL + A
Sbjct: 786 NILSNGINA 794
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/400 (19%), Positives = 164/400 (41%), Gaps = 3/400 (0%)
Query: 4 LGISPSTRLYNAVIDALV-KSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
+G++ L+N V+ L+ ++ ++ +M +P+ + +C+ G
Sbjct: 390 IGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQ 449
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA+ + + G N+ T LI G C K + E +V++ M + + + T ++
Sbjct: 450 EAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMI 509
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G + +A +L R NTLL+ N E +L +M G
Sbjct: 510 RGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQ 569
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ ++ + D+ + L + RG+KP Y L+ + G D+ G
Sbjct: 570 PDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNG-DISGAID 628
Query: 243 LNHVFKDRLVSNVN-SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
K + N +Y ++ C +++ A I + R+ ++ ++ + +I G+C
Sbjct: 629 AVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYC 688
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K ++ + + G P+K T+ +++ ++ E+A EMV GV P+ I
Sbjct: 689 KLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNI 748
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
TY LI + + + + ++ + ++ D +N L
Sbjct: 749 TYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYNIL 788
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 226/490 (46%), Gaps = 2/490 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P R N ++ L KS + L F M P FTYN++I +C+ G ++ + RL
Sbjct: 252 PKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRL 311
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
QM +G +P+V TY LIDG+ + EV + MK+ P+ T L++ +
Sbjct: 312 FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK 371
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+AFE M+ L +V +TL+ M A + M G LP
Sbjct: 372 FEKMPRAFEYFSE-MKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEF 430
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + +L E +L+ ++ GVK TY L++ L KAGR +E + +
Sbjct: 431 TYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM 490
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
KD + N Y ++ + K M+ A +I ++M + +I P+L+ + ++I GHC ++
Sbjct: 491 LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL 550
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+T+ +L + G + ++ID +A + DAL+ EM + GV +TY +L
Sbjct: 551 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVL 610
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I LC G V ++ F +M + + P++ + +LI C+ N IE A+K F M G+
Sbjct: 611 IDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGM 670
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
PD +++ALI +K G EA M + D + ++ Q G +A
Sbjct: 671 TPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARK 730
Query: 487 IVKTSKERGI 496
E+GI
Sbjct: 731 FFNEMIEKGI 740
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 186/402 (46%), Gaps = 3/402 (0%)
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP-HKAFELLIRFMEREPLTQKLVCN 154
V +F +L RN+C + + V ++ VF L +A E R L + CN
Sbjct: 201 VCNIFDML--WSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCN 258
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
LL+RLS + M G P T++ + L DL + + +
Sbjct: 259 FLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREM 318
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G+ P TY L++ K G E N + V ++ +YN +I+C+CK M RA
Sbjct: 319 GLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRA 378
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
E EM++ + PN+VT++TLI CK+ + +L V + G P++FT+ S+ID
Sbjct: 379 FEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDA 438
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
C+A +A L++M++ GV N +TY L+ LC G + + +F+ M D ISP+
Sbjct: 439 NCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPN 498
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+ AL+ + + ++E A K M ++PD Y ++I + +E K
Sbjct: 499 QQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILE 558
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M+ G + + S I++ + G+ +A + + ++ G+
Sbjct: 559 EMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGV 600
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 202/465 (43%), Gaps = 2/465 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP YN++ID K S++ F +M C PD TYN LI+ C+ +
Sbjct: 318 MGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPR 377
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +M+ G PNV TY+ LID FC + ++ M+ + PNE T SL+
Sbjct: 378 AFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLID 437
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +A++LL ++ + LL L EA + R M G P
Sbjct: 438 ANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISP 497
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ V + + + IL + +KP Y ++ + + R +E + +
Sbjct: 498 NQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWG-HCSQRKLEETKLI 556
Query: 244 NHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
K R +S N +ID + K A +EM+D + +VT+ LI G CK
Sbjct: 557 LEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCK 616
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
V + +L G +P+ + S+ID LC+ + E A EM G+ P+
Sbjct: 617 AGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITA 676
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+ LI G++ +L L +M I D++ + +L+ F + ++ +A K F M+
Sbjct: 677 FTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMI 736
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
G+ P+ L++ K G+ DEA + ME+ G +S T
Sbjct: 737 EKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITESAT 781
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ + Y +ID L K+ ++LA F +M +P+ Y LI G+C+ ++
Sbjct: 598 VGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIES 657
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +L +M+ G P++ +T LIDG + E ++ M E + + SLV
Sbjct: 658 AKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVS 717
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G +C + H+A + +E+ L ++++C LL EA + +M G +
Sbjct: 718 GFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLIT 777
Query: 184 ESSTFDYTV 192
ES+T + V
Sbjct: 778 ESATMQFPV 786
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 126/494 (25%), Positives = 234/494 (47%), Gaps = 3/494 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS Y +++A+ KS+ A +M C P+ TYN++I+G+CR VD+A ++
Sbjct: 170 PSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQI 229
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ G+ P+ +YT ++ G C AKR +V + M E N PNE T LV R
Sbjct: 230 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCR 289
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+A E+L R E +CN ++ + +A L MG G P++ +
Sbjct: 290 GGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTIS 349
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + L + +L+ +++ P T+ + L + G + + +
Sbjct: 350 YTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMP 409
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ + +YN +++ FC +D A E+ + PN +T+ TL++G C +
Sbjct: 410 EYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLTGLCHAERLD 466
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
ELL +++ + TFN ++ C+ E+A++ + +M+E G PN IT+N L+
Sbjct: 467 AAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLL 526
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+ + +L L + + IS D T+++++ R ++IE+A + F ++ +G+R
Sbjct: 527 DGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMR 586
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P Y+ ++ AL K D A F M N C P+ T +++E L ++G +EA +
Sbjct: 587 PKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYV 646
Query: 488 VKTSKERGISFKSF 501
+ RG+ KS
Sbjct: 647 LSELCSRGVLSKSL 660
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 216/455 (47%), Gaps = 6/455 (1%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
PD + LI +CR G +A R+++ EG G +V+ Y L+ G+C R+ R+
Sbjct: 68 PDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRL 127
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
+ M V P+ T L+ G+ A LL + RE + LL +
Sbjct: 128 IASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCK 184
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+S +A +L +M +G P T++ + + +++ IL+ G +P +
Sbjct: 185 SSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVS 244
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y +++ L A R + + + ++ V N +++M++ FC+ M++RA E+ M
Sbjct: 245 YTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMS 304
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+ N N +I+ CK V E L + G PD ++ +++ LCRA R+E
Sbjct: 305 EHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWE 364
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
DA + L+EMV PPN +T+N I LC G + +++ L ++M S I T+NAL+
Sbjct: 365 DAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALV 424
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
FC +++ A + F S L P+ +Y+ L+ L + R D A + M QN C
Sbjct: 425 NGFCVQGRVDSALELFNS---LPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCP 481
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ T N+++ Q+G EEA ++V+ E G +
Sbjct: 482 LNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCT 516
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 179/374 (47%), Gaps = 15/374 (4%)
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
D +A L+ R R +C L+ L S+AA +LR G F
Sbjct: 50 DLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSG--APVDVFA 107
Query: 190 YTVTCLVTGLDLNETC--GILDT----FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
Y LV G C G LD V P TY L+ L GR + L
Sbjct: 108 YNT--LVAGY-----CRYGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLL 160
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + +V +Y ++++ CK + +A ++ EMR + PN+VT+N +I+G C++
Sbjct: 161 DDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCRE 220
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V R++L L GF+PD ++ +++ LC A R+ED EMVE PN +T+
Sbjct: 221 DRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTF 280
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
++L+R C G V R++ + +M + + N +I S C+ +++ A + +M +
Sbjct: 281 DMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGS 340
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G PD SY+ ++K L ++GR+++AK+ M + C P+ T N + L Q+G ++
Sbjct: 341 YGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQ 400
Query: 484 AHDIVKTSKERGIS 497
A +++ E G S
Sbjct: 401 AILLIEQMPEYGCS 414
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 196/428 (45%), Gaps = 7/428 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G P T Y V+ L + + + F +M + C P+ T+++L+ CR G+
Sbjct: 233 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGM 292
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V+ A+ ++ +M G N I+I+ C RV + F L M P+ + +
Sbjct: 293 VERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTT 352
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ R A ELL + + ++ NT + L + +A ++ +M + G
Sbjct: 353 VLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYG 412
Query: 181 YLPESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
T++ V C+ +D L+ F +P TY L+ L A R
Sbjct: 413 CSVGIVTYNALVNGFCVQGRVD-----SALELFNSLPCEPNTITYTTLLTGLCHAERLDA 467
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
L + ++ NV ++N+++ FC+ ++ A E+ ++M + PNL+TFNTL+
Sbjct: 468 AAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLD 527
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G +D + ELL L+ G D T++S++D L R R E+A+ + + G+ P
Sbjct: 528 GITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRP 587
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ YN ++ +LC + R++ F M ++ P+ T+ LI+ R +++A
Sbjct: 588 KAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVL 647
Query: 419 FSMLTLGL 426
+ + G+
Sbjct: 648 SELCSRGV 655
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+R L A D+A + RL ++ + +PD+Y LI++ CR + A + + G
Sbjct: 42 LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGA 101
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
D F+Y+ L+ + GR D A++ SM PD+YT ++ L +GR +A
Sbjct: 102 PVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDA 156
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/556 (25%), Positives = 248/556 (44%), Gaps = 81/556 (14%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM---EGLGYAPN 79
S+++D+ + ++S C PD F+ IL+ G+C EAL L M G G AP+
Sbjct: 139 SDAMDIVLRRMTELS---CMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPD 195
Query: 80 VYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLI 139
V +YT +I+GF + + M +R + P+ T S++ + + KA E+L
Sbjct: 196 VVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLT 255
Query: 140 RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC-LVTG 198
++ + ++++ ++ EA L+K+ G P+ D C L+ G
Sbjct: 256 SMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQG 315
Query: 199 -------------LDL--------------------------NETCGILDTFIKRGVKPR 219
LDL +E + ++G+ P
Sbjct: 316 YATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPD 375
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
TY ++ L K+GR + Y + + L YN +I C N +RA E+
Sbjct: 376 AVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL 435
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
EM DR I N + FN++I HCK+ V ++ +L +++ G KPD T++++ID C A
Sbjct: 436 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 495
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ ++A+ LS MV G+ PNT+TY LI C I + +L LF++M++ +SPDI T+N
Sbjct: 496 KMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYN 555
Query: 400 ALIQ-----------------------------------SFCRMNKIEKAEKAFFSMLTL 424
++Q C+ + A + F ++ +
Sbjct: 556 IILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLM 615
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
L+ + +++ +I AL+K GR EAK F++ NG P+ +T L+ E ++ QG EE
Sbjct: 616 DLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEEL 675
Query: 485 HDIVKTSKERGISFKS 500
+ + ++ G + S
Sbjct: 676 DQLFLSMEDNGCTVDS 691
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 125/503 (24%), Positives = 233/503 (46%), Gaps = 9/503 (1%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P+ Y +I +++ +DL + + + + T+ L+ G+C +A+
Sbjct: 83 VTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142
Query: 66 RLV-KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE---RNVCPNEATVRSL 121
+V ++M L P+V++ TIL+ G C+ R E + +M + P+ + ++
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTV 202
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++G F+ D KA+ ++R + ++++ L +A +L M G
Sbjct: 203 INGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGV 262
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGIL-----DTFIKRGVKPRFSTYLLLMEALYKAGRD 236
+P T+ + + E G L D G++P +TY L++ G
Sbjct: 263 MPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGAL 322
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
V L+ + ++ + + YN++I + K +D A + +MR + + P+ VT+ +
Sbjct: 323 VGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAV 382
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
I CK V +++ G P +NS+I LC +++E A + + EM++ G+
Sbjct: 383 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 442
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
NTI +N +I S C G V S +LF M + PDI T++ LI +C K+++A K
Sbjct: 443 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMK 502
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
M+++GL+P+ +Y LI K R +A F ME +G +PD T N+IL+ L
Sbjct: 503 LLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLF 562
Query: 477 QQGRFEEAHDIVKTSKERGISFK 499
Q R A ++ E G +
Sbjct: 563 QTRRTAAAKELYVRITESGTQIE 585
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/537 (23%), Positives = 232/537 (43%), Gaps = 42/537 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P Y VI+ K AY + +M + PD TY+ +I +C+ +D+A
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNE-----ATVR 119
+ ++ M G PN TYT ++ G+C++ + E L+ ++ V P+ AT
Sbjct: 251 MEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYC 310
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPL-TQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
+L+ G + L+ M R + V N L+ + EA + KM
Sbjct: 311 TLLQG-YATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQ 369
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+G P++ T+ + L + + + I G+ P Y L+ L +
Sbjct: 370 QGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 429
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + + N +N +ID CK + + ++ M + P+++T++TLI
Sbjct: 430 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 489
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G+C ++ + +LL ++ G KP+ T+ ++I+ C+ R DAL EM GV P
Sbjct: 490 GYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSP 549
Query: 359 NTITYNILIRSL-----------------------------------CAIGDVARSLRLF 383
+ ITYNI+++ L C +LR+F
Sbjct: 550 DIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMF 609
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
Q + + + TFN +I + ++ + +A+ F + + GL P+ ++Y + + +I
Sbjct: 610 QNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQ 669
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
G +E Q FLSME NGC DS N I+ L+Q+G A + E+ S ++
Sbjct: 670 GLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEA 726
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 110/482 (22%), Positives = 216/482 (44%), Gaps = 38/482 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++ ++ + M + PD + YNILI + G VDEA
Sbjct: 301 GLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEA 360
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + +M G P+ TY +I C + RV + E M + + P SL+HG
Sbjct: 361 MLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 420
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ C +A EL++ ++R + NT+ + +S E I
Sbjct: 421 LCTCNKWERAEELILEMLDR-----GICLNTIFFNSIIDSHCKEGRVI------------ 463
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
E+ + D ++ GVKP TY L++ AG+ E + L+
Sbjct: 464 ------------------ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLS 505
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L N +Y +I+ +CK++ M A + +EM ++P+++T+N ++ G +
Sbjct: 506 GMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTR 565
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+EL V + E G + + T+N ++ LC+ +DAL + + T+N
Sbjct: 566 RTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFN 625
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+I +L +G + LF ++ + P+ +T+ + ++ +E+ ++ F SM
Sbjct: 626 IMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 685
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSM-EQNGCNPDSYTSNLILETLVQQGRFEE 483
G D+ + +++ L++ G A T+LSM ++ + ++ T++L ++ L+ G+++E
Sbjct: 686 GCTVDSGMLNFIVRELLQRGEITRAG-TYLSMIDEKHFSLEASTASLFID-LLSGGKYQE 743
Query: 484 AH 485
H
Sbjct: 744 YH 745
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 90/231 (38%), Gaps = 35/231 (15%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P Y+ +ID + +D A M KP+ TY LI+G C+I + +
Sbjct: 475 IGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGD 534
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L K+ME G +P++ TY I++ G +R A
Sbjct: 535 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA-------------------------- 568
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
A EL +R E + N +L+ L N + +A + + +
Sbjct: 569 ---------AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKL 619
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
E+ TF+ + L+ E + F G+ P + TY L+ E + G
Sbjct: 620 EARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG 670
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 11/250 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+T Y +I+ K + + A + F++M PD TYNI++ G+ +
Sbjct: 510 VGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAA 569
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L ++ G + TY I++ G C K + R+ + + ++ T ++
Sbjct: 570 AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMID 629
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS-----NNSMASEAAAILRKMGD 178
+ + +A +L + F + LV N YRL + E + M D
Sbjct: 630 ALLKVGRNGEAKDLFVAFS-----SNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 684
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G +S ++ V L+ ++ L ++ ST L ++ L G+ E
Sbjct: 685 NGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLSGGKYQE 743
Query: 239 GDRYLNHVFK 248
R+L +K
Sbjct: 744 YHRFLPEKYK 753
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 15/155 (9%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR-----SLRLFQKMQ---ADRISP 393
EDA E++ G + N A+ DVAR ++ + +M A +++P
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNR------ALADVARHSPAAAVSRYNRMARAGAGKVTP 85
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
++T+ LI CR ++++ A +++ G R + +++ L+K L R +A
Sbjct: 86 TVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIV 145
Query: 454 L-SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
L M + C PD ++ ++L+ L + R +EA ++
Sbjct: 146 LRRMTELSCMPDVFSCTILLKGLCDENRSQEALEL 180
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 226/465 (48%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F++M C+P F+YN ++ + G D+A ++ +M G P+VY++TI + FC
Sbjct: 99 FERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCR 158
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
R R+L M + N ++V G + + +EL + +
Sbjct: 159 TSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLST 218
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
N LL+ L E +L K+ RG LP T+++ + L +L+ ++ I
Sbjct: 219 FNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLI 278
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+G KP TY L+ L K + E + YL + + L + +YN +I +CK M+
Sbjct: 279 DQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQ 338
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A I P+ T+ +LI G C + E ++ L L G KP+ +N++I
Sbjct: 339 LAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
L +A SEM E G+ P T+NIL+ LC +G V+ + L + M +
Sbjct: 399 KGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF 458
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PDI+TFN LI + K+E A + M+ G+ PD ++Y++L+ L K+ ++++ +T
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMET 518
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ +M + GC P+ +T N++LE+L + + ++A +++ K + ++
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVN 563
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 143/602 (23%), Positives = 253/602 (42%), Gaps = 106/602 (17%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F P+ YNA++ LV S D A+ + +M PD +++ I + CR
Sbjct: 102 MDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSR 161
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGF------------------------------ 90
ALRL+ M G NV Y ++ GF
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNK 221
Query: 91 -----CNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
C V E ++L+ + +R V PN T + G+ + + A ++ R +++
Sbjct: 222 LLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQG 281
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF----------------- 188
P + N L+Y L NS EA L K+ + G P+S T+
Sbjct: 282 PKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAE 341
Query: 189 --------------DYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
++T L+ GL + N + + + +G+KP Y L++ L
Sbjct: 342 RILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
G +E + + + + L+ V ++N++++ CK+ + A + + M + P++
Sbjct: 402 SNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
TFN LI G+ ++ E+L ++++ G PD +T+NS+++ LC+ ++ED ++
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKT 521
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR--- 407
MVE G PN T+NIL+ SLC + ++L L ++M+ ++PD TF LI FC+
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 408 -------MNKIEK--------------------------AEKAFFSMLTLGLRPDNFSYS 434
K+E+ AEK F M+ L PD ++Y
Sbjct: 582 LDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
++ K+G D + L M +NG P T ++ L + R EA I+ ++
Sbjct: 642 LMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 495 GI 496
G+
Sbjct: 702 GL 703
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 213/463 (46%), Gaps = 3/463 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN I L + +D A ++ KPD TYN LI+G+C+ EA
Sbjct: 246 GVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEA 305
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ G P+ +TY LI G+C V R+L P+E T RSL+ G
Sbjct: 306 EVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDG 365
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + ++A L + + ++ NTL+ LSN + EAA + +M ++G +PE
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPE 425
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ V L +++ G++ I +G P T+ +L+ Y +E +
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG-YSTQLKMENALEIL 484
Query: 245 HVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
V D V +V +YN +++ CK + + E + M ++ APNL TFN L+ C+
Sbjct: 485 DVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRY 544
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE-WGVPPNTIT 362
++ K LL + PD TF ++ID C+ + A +M E + V +T T
Sbjct: 545 HKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPT 604
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YNI+I + +V + +LFQ+M + PD YT+ ++ FC+ ++ K M+
Sbjct: 605 YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMM 664
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
G P + +I L R EA M Q G P++
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 201/439 (45%)
Query: 57 RIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEA 116
R G V EA+ + ++M+ P V++Y ++ ++ + +V M++R + P+
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 117 TVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
+ + R PH A LL + + T++ + E + KM
Sbjct: 148 SFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKM 207
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
G STF+ + L D+ E +LD IKRGV P TY ++ L + G
Sbjct: 208 LASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGEL 267
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
R + + +V +YN +I CK + A ++ + + P+ T+NTL
Sbjct: 268 DAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTL 327
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
I+G+CK V +LV + GF PD+FT+ S+ID LC AL +E + G+
Sbjct: 328 IAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
PN I YN LI+ L G + + +L +M + P++ TFN L+ C+M + A+
Sbjct: 388 KPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
M++ G PD F+++ LI + + A + M NG +PD YT N +L L
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLC 507
Query: 477 QQGRFEEAHDIVKTSKERG 495
+ ++E+ + KT E+G
Sbjct: 508 KTSKYEDVMETYKTMVEKG 526
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 167/364 (45%), Gaps = 9/364 (2%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G P Y ++ID L + A F + KP+ YN LI G+ G++
Sbjct: 349 FNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLIL 408
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA +L +M G P V T+ IL++G C V++ ++++M + P+ T L+
Sbjct: 409 EAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
HG L A E+L M+ N+LL L S + + M ++G
Sbjct: 469 HGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCA 528
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD-- 240
P TF+ + L L++ G+L+ + V P T+ L++ K G D++G
Sbjct: 529 PNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG-DLDGAYT 587
Query: 241 --RYLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
R + V+ +VS + +YN++I F + + A ++ +EM DR + P+ T+ ++
Sbjct: 588 LFRKMEEVY---MVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G CK V + L+ ++E GF P T +I+CLC R +A + MV+ G+
Sbjct: 645 DGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704
Query: 358 PNTI 361
P +
Sbjct: 705 PEAV 708
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 120/295 (40%), Gaps = 15/295 (5%)
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYL--------NHVFKDRLVSNVNSYNMVIDCFC 266
G K STY ++E L G+ + L NH+ + V + +Y
Sbjct: 35 GFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGAMKNYG------- 87
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
+ + A + M D P + ++N ++S + ++ + + + G PD +
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
+F + CR R AL L+ M G N + Y ++ LF KM
Sbjct: 148 SFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKM 207
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
A +S + TFN L+ C+ +++ EK ++ G+ P+ F+Y+ I+ L + G
Sbjct: 208 LASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGEL 267
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
D A + + G PD T N ++ L + +F+EA + G+ SF
Sbjct: 268 DAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSF 322
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 88/215 (40%), Gaps = 36/215 (16%)
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFE----------------------------------- 342
E GFK T+ S+I+ L +FE
Sbjct: 33 EDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKV 92
Query: 343 -DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+A++ M + P +YN ++ L G ++ +++ +M+ I+PD+Y+F
Sbjct: 93 QEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIR 152
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
++SFCR ++ A + +M + G + +Y ++ + DE + F M +G
Sbjct: 153 MKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGV 212
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ T N +L L ++G +E ++ +RG+
Sbjct: 213 SLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGV 247
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 228/475 (48%), Gaps = 36/475 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ +YN +I L K I A F +MSV P+R T+N LI G C+ G VD A+
Sbjct: 97 VVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAI 156
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L ++M+ P++ T+ L+ G C A+R+ E +L +K P+ T + G+
Sbjct: 157 GLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGL 216
Query: 126 FRCLD-PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D A +L + + C+ LL L +A +L+ + + G +P
Sbjct: 217 LKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPG 276
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ V D++ ++ RG++P
Sbjct: 277 EVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRP-------------------------- 310
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
N ++N VID FC++ M+D+A E ++M + IAP++ T+N LI G+ +
Sbjct: 311 ---------NCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLC 361
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ ++L + E G KP+ ++ S+I+CLC+ + +A L +MV GV PN YN
Sbjct: 362 VFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYN 421
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI C +G + +LR F +M + I I T+N+LI+ C+M K+++AE+ FF + +
Sbjct: 422 MLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITST 481
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
G PD +Y++LI +G + + + +M++ G P T + ++ ++G
Sbjct: 482 GHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG 536
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/532 (24%), Positives = 239/532 (44%), Gaps = 39/532 (7%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S + P+ +N +ID K+ +D+A ++M ++ +P T+N L+ G+C+
Sbjct: 127 MSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARR 186
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID-------------------------------- 88
++EA ++ +++ G+ P+ +TY+I+ D
Sbjct: 187 IEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCS 246
Query: 89 ----GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMER 144
G C +V + VL+ + E + P E ++V+G + D +A L I ME
Sbjct: 247 ILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAI-LTIEQMES 305
Query: 145 EPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
L + N+++ + M +A ++KM +G P T++ + +
Sbjct: 306 RGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSR 365
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
IL+ + G KP +Y L+ L K G+ +E + L + ++ N N YNM+ID
Sbjct: 366 CFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLID 425
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
C V + A EM I +VT+N+LI G CK ++ + E+ ++ G P
Sbjct: 426 GSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCP 485
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D T+NS+I A + L+ M + G+ P T++ LI S C+ + LF
Sbjct: 486 DVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLI-SGCSKEGIKLKETLF 544
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+M +SPD +NA+I + ++KA M+ +G+RPDN +Y++LI +K
Sbjct: 545 NEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKE 604
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G+ E K M+ G P++ T +L+++ F A+ + E G
Sbjct: 605 GKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENG 656
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/518 (24%), Positives = 225/518 (43%), Gaps = 37/518 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG-VVDEA 64
+ PS +N+++ L K+ I+ A ++ + PD FTY+I+ G+ + A
Sbjct: 167 VEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAA 226
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L ++ G G + YT +IL++G C +V + VL+ + E + P E ++V+G
Sbjct: 227 LDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNG 286
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ D +A L I ME L + N+++ + M +A ++KM +G P
Sbjct: 287 YCQIGDMDRAI-LTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAP 345
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + + IL+ + G KP +Y L+ L K G+ +E + L
Sbjct: 346 SVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVL 405
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ ++ N N YNM+ID C V + A EM I +VT+N+LI G CK
Sbjct: 406 RDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKM 465
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC---------------- 347
++ + E+ ++ G PD T+NS+I A + L+
Sbjct: 466 GKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTF 525
Query: 348 ------------------LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+EM++ + P+ + YN +I G V ++ L ++M
Sbjct: 526 HPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDM 585
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ PD T+N+LI + K+ + + M GL P+ +YS LI+ F+ A
Sbjct: 586 GVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGA 645
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+ M +NG P+ N + L + GR +EA I
Sbjct: 646 YVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSI 683
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 193/456 (42%), Gaps = 36/456 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P +YN +++ + +D A L +QM +P+ +N +I C + ++D+A
Sbjct: 272 GLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKA 331
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
VK+M G G AP+V TY ILIDG+ + F++LE M+E PN + SL++
Sbjct: 332 EEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLIN- 390
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
C L + EA +LR M RG LP
Sbjct: 391 ----------------------------C------LCKDGKILEAEMVLRDMVGRGVLPN 416
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ ++ + T L E D K G+ TY L++ L K G+ E +
Sbjct: 417 ANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFF 476
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +V +YN +I + + E+ M+ + P + TF+ LISG C
Sbjct: 477 LITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISG-CSKE 535
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ L +L+ PD+ +N+MI C + A EMV+ GV P+ TYN
Sbjct: 536 GIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYN 595
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI G ++ + L M+A + P+ T++ LIQ C + A + ML
Sbjct: 596 SLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLEN 655
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
G P+ + L L K GR EA+ M NG
Sbjct: 656 GFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANG 691
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 159/344 (46%), Gaps = 3/344 (0%)
Query: 156 LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRG 215
LL S + M S+ + + M G LP V LV + + + G
Sbjct: 2 LLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLG 61
Query: 216 VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR-LVSNVNSYNMVIDCFCKVNMMDRA 274
+P Y M A K G D++ L K R +V NV YN++I CK + A
Sbjct: 62 FRPDKLVYGRAMLAAVKLG-DLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
++ EM R++ PN VTFNTLI G+CK EV L + + +P TFNS++
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA-RSLRLFQKMQADRISP 393
LC+A R E+A L+E+ G P+ TY+I+ L D A +L L+++ +
Sbjct: 181 LCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKI 240
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
D YT + L+ C+ K+EKAE+ S++ GL P Y+ ++ + G D A T
Sbjct: 241 DNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTI 300
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
ME G P+ N +++ + ++A + VK +GI+
Sbjct: 301 EQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIA 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 115/276 (41%), Gaps = 42/276 (15%)
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
M++ + M + +E+ MR P+ ++ + + +L ++
Sbjct: 1 MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
GF+PDK + + + + A++ M V PN YN+LI LC + +
Sbjct: 61 GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIE---------KAEKAFFSMLTL------ 424
+LF +M + P+ TFN LI +C+ +++ K EK S++T
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180
Query: 425 --------------------GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ----NG 460
G PD F+YS + L+KS D+ L + + G
Sbjct: 181 LCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKS---DDGAGAALDLYREAIGKG 237
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
D+YT +++L L ++G+ E+A +++K+ E G+
Sbjct: 238 VKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGL 273
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ +SP +YNA+I ++ + A+ ++M +PD TYN LI G + G + E
Sbjct: 550 MNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSE 609
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
LV M+ G P TY++LI G C+ K + M E PN L
Sbjct: 610 TKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELST 669
Query: 124 GV 125
G+
Sbjct: 670 GL 671
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 219/456 (48%), Gaps = 38/456 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P+ Y A+I A ++ ++ A ++M C P+ TYN+L+ +C++ +V
Sbjct: 51 MGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGA 110
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +VK+M G+APNV T+ L+DGFC V + ++L IM + + PN T +L+
Sbjct: 111 AQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALID 170
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +QK + EA +L +M G P
Sbjct: 171 GLCK--------------------SQKFL---------------EAKEVLEEMKASGVTP 195
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ T+ + L + E +L G P Y ++ A K+G+ +E + L
Sbjct: 196 DAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTL 255
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR-DIAPNLVTFNTLISGHCK 302
+ K R +V +YN VID CK+ + A I +M++ D+ P++VT++T+I+G CK
Sbjct: 256 QEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCK 315
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + ++LL + + G PD T+ ++ID LC+ R E+A L M G PN +T
Sbjct: 316 SDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVT 375
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y LI LC V + R+ ++M+ P++ T+N ++ C +I++A++ M
Sbjct: 376 YTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMK 435
Query: 423 T--LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
PD +Y ++ AL+ S EA+Q M
Sbjct: 436 DGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 220/460 (47%), Gaps = 6/460 (1%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
++M PD FT+ +I + G +D A+ ++ M G PNV TYT LI F
Sbjct: 13 LEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFAR 69
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
AK++ E ++LE M+ER PN T LV + + A +++ + +E +
Sbjct: 70 AKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMT 129
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
N+L+ +A +L M +G P T+ + L E +L+
Sbjct: 130 FNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMK 189
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
GV P TY L+ L KA + E ++ L + +V Y+ +I FCK +
Sbjct: 190 ASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLL 249
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG-FKPDKFTFNSM 331
A + +EMR + +P++VT+NT+I G CK ++ + + +L + E G PD T++++
Sbjct: 250 EAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTV 309
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
I+ LC++ +A L M + G P+ +TY +I LC G + + L Q M+
Sbjct: 310 INGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGC 369
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
+P++ T+ LI C+ K+++AE+ M G P+ +Y+ ++ L SGR EA+Q
Sbjct: 370 APNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQ 429
Query: 452 TFLSMEQN--GCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
M+ C+PD+ T I+ L+ +EA +++
Sbjct: 430 LVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLE 469
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 180/365 (49%), Gaps = 39/365 (10%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A +L +M G+ P++ T +T + DL+ G +D G P TY L+
Sbjct: 9 ALELLEEMKSAGFAPDAFTHTPIITAMANAGDLD---GAMDHLRSMGCDPNVVTYTALIA 65
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
A +A + E + L + + N+ +YN+++D CK++M+ A ++ ++M + AP
Sbjct: 66 AFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAP 125
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
N++TFN+L+ G CK V R+LL +++ G +P+ T++++ID LC++ +F +A + L
Sbjct: 126 NVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVL 185
Query: 349 SEMVEWGVPPNTITYNILIRSLCAI----------------------------------- 373
EM GV P+ TY+ LI LC
Sbjct: 186 EEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKS 245
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG-LRPDNFS 432
G + + + Q+M+ R SPD+ T+N +I C++ KI +A+ M G + PD +
Sbjct: 246 GKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVT 305
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
YS +I L KS EA++ M + GCNPD T I++ L + GR EEA +++ K
Sbjct: 306 YSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMK 365
Query: 493 ERGIS 497
G +
Sbjct: 366 RAGCA 370
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 161/296 (54%), Gaps = 3/296 (1%)
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
DL+ +L+ G P T+ ++ A+ AG D++G ++H+ NV +Y
Sbjct: 5 DLHAALELLEEMKSAGFAPDAFTHTPIITAMANAG-DLDG--AMDHLRSMGCDPNVVTYT 61
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
+I F + ++ A ++ EMR+R PNLVT+N L+ CK + V ++++ ++E
Sbjct: 62 ALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEG 121
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
GF P+ TFNS++D C+ +DA L MV G+ PN +TY+ LI LC +
Sbjct: 122 GFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEA 181
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+ ++M+A ++PD +T++ALI C+ +KIE+AE+ M G PD YS++I A
Sbjct: 182 KEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHA 241
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
KSG+ EA++T M + +PD T N +++ L + G+ EA I+ +E G
Sbjct: 242 FCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 201/441 (45%), Gaps = 39/441 (8%)
Query: 56 CRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNE 115
C G + AL L+++M+ G+AP+ +T+T +I NA ++ ++ ++ PN
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANA---GDLDGAMDHLRSMGCDPNV 57
Query: 116 ATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
T +L+ R +KL EA +L +
Sbjct: 58 VTYTALIAAFAR--------------------AKKL---------------EEAMKLLEE 82
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
M +RG P T++ V L + ++ I+ G P T+ L++ K G
Sbjct: 83 MRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGN 142
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
+ + L + + NV +Y+ +ID CK A E+ EM+ + P+ T++
Sbjct: 143 VDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSA 202
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
LI G CK ++ + ++L + G PD ++S+I C++ + +A L EM +
Sbjct: 203 LIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQR 262
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQ-ADRISPDIYTFNALIQSFCRMNKIEKA 414
P+ +TYN +I LC +G +A + + +MQ + + PD+ T++ +I C+ + + +A
Sbjct: 263 KSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEA 322
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
+K M G PD +Y+ +I L K GR +EA+ M++ GC P+ T ++
Sbjct: 323 QKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISG 382
Query: 475 LVQQGRFEEAHDIVKTSKERG 495
L + + +EA +++ + G
Sbjct: 383 LCKARKVDEAERVMEEMRNAG 403
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 226/465 (48%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F++M C+P F+YN ++ + G D+A ++ +M G P+VY++TI + FC
Sbjct: 99 FERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCK 158
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
R R+L M + N ++V G + + +EL + +
Sbjct: 159 TSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLST 218
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
N LL L E +L K+ RG LP T++ + L +L+ ++ I
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI 278
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
++G KP TY L+ L K + E + YL + + L + +YN +I +CK M+
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A I + P+ T+ +LI G C + E ++ L L G KP+ +N++I
Sbjct: 339 LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
L +A +EM E G+ P T+NIL+ LC +G V+ + L + M +
Sbjct: 399 KGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF 458
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PDI+TFN LI + K+E A + ML G+ PD ++Y++L+ L K+ +F++ +T
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ +M + GC P+ +T N++LE+L + + +EA +++ K + ++
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVN 563
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 145/602 (24%), Positives = 251/602 (41%), Gaps = 106/602 (17%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F P+ YNA++ LV S D A+ + +M PD +++ I + C+
Sbjct: 102 MDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSR 161
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGF------------------------------ 90
ALRL+ M G NV Y ++ GF
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNK 221
Query: 91 -----CNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
C V E ++L+ + +R V PN T + G+ + + A ++ +E+
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD---------------- 189
P + N L+Y L NS EA L KM + G P+S T++
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341
Query: 190 ---------------YTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
+T L+ GL + N + + + +G+KP Y L++ L
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
G +E + N + + L+ V ++N++++ CK+ + A + + M + P++
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
TFN LI G+ ++ E+L ++L+ G PD +T+NS+++ LC+ +FED ++
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR--- 407
MVE G PN T+NIL+ SLC + +L L ++M+ ++PD TF LI FC+
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 408 -------MNKIEKA--------------------------EKAFFSMLTLGLRPDNFSYS 434
K+E+A EK F M+ L PD ++Y
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
++ K+G + + L M +NG P T ++ L + R EA I+ ++
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 495 GI 496
G+
Sbjct: 702 GL 703
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 210/462 (45%), Gaps = 1/462 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN I L + +D A + KPD TYN LI+G+C+ EA
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G P+ YTY LI G+C V R++ P++ T RSL+ G
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + ++A L + + ++ NTL+ LSN M EAA + +M ++G +PE
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ V L +++ G++ I +G P T+ +L+ + L+
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + +V +YN +++ CK + + E + M ++ APNL TFN L+ C+
Sbjct: 486 VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYR 545
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE-WGVPPNTITY 363
++ + LL + PD TF ++ID C+ + A +M E + V +T TY
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTY 605
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI+I + +V + +LFQ+M + PD YT+ ++ FC+ + K M+
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME 665
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
G P + +I L R EA M Q G P++
Sbjct: 666 NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 203/439 (46%)
Query: 57 RIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEA 116
R G V EA+ + ++M+ P V++Y ++ ++ + +V M++R + P+
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 117 TVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
+ + + PH A LL + + T++ + +E + KM
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
G STF+ + L D+ E +LD IKRGV P TY L ++ L + G
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
R + + + +V +YN +I CK + A +M + + P+ T+NTL
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
I+G+CK V ++ + GF PD+FT+ S+ID LC AL +E + G+
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
PN I YN LI+ L G + + +L +M + P++ TFN L+ C+M + A+
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
M++ G PD F+++ LI + + A + M NG +PD YT N +L L
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Query: 477 QQGRFEEAHDIVKTSKERG 495
+ +FE+ + KT E+G
Sbjct: 508 KTSKFEDVMETYKTMVEKG 526
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 167/361 (46%), Gaps = 3/361 (0%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G P Y ++ID L + A F + KP+ YN LI G+ G++
Sbjct: 349 FNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMIL 408
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA +L +M G P V T+ IL++G C V++ ++++M + P+ T L+
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
HG L A E+L ++ N+LL L S + + M ++G
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P TF+ + L L+E G+L+ + V P T+ L++ K G D++G
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG-DLDGAYT 587
Query: 243 LNHVFKD--RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L ++ ++ S+ +YN++I F + + A ++ +EM DR + P+ T+ ++ G
Sbjct: 588 LFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK V+ + L+ ++E GF P T +I+CLC R +A + MV+ G+ P
Sbjct: 648 CKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Query: 361 I 361
+
Sbjct: 708 V 708
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 123/295 (41%), Gaps = 15/295 (5%)
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYL--------NHVFKDRLVSNVNSYNMVIDCFC 266
G K STY ++E L G+ + L NH+ + V + +Y
Sbjct: 35 GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYG------- 87
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
+ + A + M D P + ++N ++S + ++ + + + G PD +
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
+F + C+ R AL L+ M G N + Y ++ A LF KM
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
A +S + TFN L++ C+ +++ EK ++ G+ P+ F+Y+ I+ L + G
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
D A + + + G PD T N ++ L + +F+EA + G+ S+
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 6/167 (3%)
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE-WGVPPNTITYNILIRSLCAIGDV 376
E GFK T+ S+I+ L +FE + L +M E G Y +++ G V
Sbjct: 33 EVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKV 92
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
++ +F++M P ++++NA++ ++A K + M G+ PD +S++
Sbjct: 93 QEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIR 152
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+K+ K+ R A + +M GC N++ V G +EE
Sbjct: 153 MKSFCKTSRPHAALRLLNNMSSQGCE-----MNVVAYCTVVGGFYEE 194
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 222/471 (47%), Gaps = 35/471 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P N ++ +K N +++A++ + +M + +T+NI+++ +C+ G + +A
Sbjct: 187 GIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKA 246
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ MEGLG+ PNV +Y +I G+ + + R+L+ M+ + + P+ T SL+ G
Sbjct: 247 REFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISG 306
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + EA+ + KM + G +P
Sbjct: 307 MCK-----------------------------------EGRLEEASGLFDKMVEIGLVPN 331
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + DL D +K+G+ P STY LL+ AL+ GR E D +
Sbjct: 332 AVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIK 391
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K ++ + +YN++I+ + + +A ++ EM + I P VT+ +LI +
Sbjct: 392 EMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRN 451
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + +L +L+ G PD FN+M+D C E A L EM VPP+ +T+N
Sbjct: 452 RMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFN 511
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L++ C G V + L +M+ I PD ++N LI + R I+ A + ML++
Sbjct: 512 TLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSI 571
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G P +Y+ALIK L K+ D A++ M G +PD T ++E +
Sbjct: 572 GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 214/451 (47%), Gaps = 2/451 (0%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
+++L+ C + DEA + M+ G P + T ++ F R+ + + M
Sbjct: 160 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 219
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMA 166
+ T +V+ + + KA E I FME +V NT+++ S+
Sbjct: 220 RLRISSTVYTFNIMVNVLCKEGKLKKAREF-IGFMEGLGFKPNVVSYNTIIHGYSSRGNI 278
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
A IL M +G P+S T+ ++ + L E G+ D ++ G+ P TY L
Sbjct: 279 EGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL 338
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ G Y + + K ++ +V++YN+++ M A ++ +EMR + I
Sbjct: 339 IDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI 398
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P+ +T+N LI+G+ + K +L +L G +P T+ S+I L R +R ++A D
Sbjct: 399 IPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADD 458
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
++++ GV P+ I +N ++ CA G+V R+ L ++M + PD TFN L+Q C
Sbjct: 459 LFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRC 518
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R K+E+A M G++PD+ SY+ LI + G +A + M G NP
Sbjct: 519 REGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLL 578
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T N +++ L + + A +++K +GIS
Sbjct: 579 TYNALIKCLCKNQEGDLAEELLKEMVNKGIS 609
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 190/410 (46%), Gaps = 39/410 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P+ YN +I +I+ A M V +PD +TY LI G+C+ G ++E
Sbjct: 256 LGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEE 315
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L +M +G PN TY LIDG+CN + F + M ++ + P+ +T LVH
Sbjct: 316 ASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVH 375
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ FME EA ++++M +G +P
Sbjct: 376 AL---------------FME--------------------GRMGEADDMIKEMRKKGIIP 400
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ T++ + + + + + + +G++P TY L+ L + R E D
Sbjct: 401 DAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLF 460
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +V +N ++D C ++RA + +EM + + P+ VTFNTL+ G C++
Sbjct: 461 EKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 520
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V + R LL + G KPD ++N++I R +DA EM+ G P +TY
Sbjct: 521 GKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTY 580
Query: 364 NILIRSLC--AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
N LI+ LC GD+A L ++M ISPD T+ +LI+ ++ +
Sbjct: 581 NALIKCLCKNQEGDLAE--ELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 628
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%)
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
RDR + + F+ L+ C+ + + M+ E G P T N M+ + +R
Sbjct: 149 RDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRM 208
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
E A +EM + T+NI++ LC G + ++ M+ P++ ++N +
Sbjct: 209 EMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTI 268
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I + IE A + +M G+ PD+++Y +LI + K GR +EA F M + G
Sbjct: 269 IHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGL 328
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
P++ T N +++ +G E A ++GI
Sbjct: 329 VPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGI 363
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P YN +I + I A+ +M P TYN LI +C+ D A
Sbjct: 537 GIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLA 596
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE 98
L+K+M G +P+ TY LI+G N + E
Sbjct: 597 EELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 630
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/495 (25%), Positives = 237/495 (47%), Gaps = 14/495 (2%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G++ ST+ +N V+D ++M ++ + +T NI+I+ CR
Sbjct: 72 FSGVA-STKQFNLVLDFC-------------KKMELNGIAHNIYTLNIMINCFCRCCKTC 117
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A ++ ++ LGY P+ T+ LI+G C +V+E ++ M E PN T S+V
Sbjct: 118 FAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIV 177
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G+ + D A +LL + ER +T++ L + A ++ ++M +G
Sbjct: 178 NGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 237
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
T++ V L N+ +L R + P T+ +L++ K G+ E +
Sbjct: 238 SSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANEL 297
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + N +YN ++D +C N + A + M + +P++VTF +LI G+CK
Sbjct: 298 YKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCK 357
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
V + +L + + G + T++ ++ C++ + E A + EMV GV P+ +T
Sbjct: 358 VKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMT 417
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y IL+ LC G + ++L +F+ +Q +++ DI + +I+ C+ K+E A F S+
Sbjct: 418 YGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLP 477
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G++P+ +Y+ +I L K G EA ME++G P+ T N ++ ++ G
Sbjct: 478 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLT 537
Query: 483 EAHDIVKTSKERGIS 497
+ +++ K G S
Sbjct: 538 ASAKLIEEMKSCGFS 552
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 125/487 (25%), Positives = 243/487 (49%), Gaps = 9/487 (1%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
RL + ++D + + ++IDL FQ+M + P ++ G+ + L K+
Sbjct: 36 RLRSGIVD-IKEDDAIDL----FQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKK 90
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
ME G A N+YT I+I+ FC + + VL + + P+ T +L++G+ CL+
Sbjct: 91 MELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGL--CLE 148
Query: 131 PH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+A L+ R +E + N+++ + + S A +LRKM +R + T+
Sbjct: 149 SKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTY 208
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ L ++ + +G+K TY L+ L KAG+ +G + L +
Sbjct: 209 STIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTS 268
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+++ NV ++N++ID F K + A E+ +EM + I+PN +T+N+L+ G+C + +
Sbjct: 269 RKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSE 328
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+L +++ PD TF S+I C+ R ++ + ++ + G+ NT+TY+IL++
Sbjct: 329 ANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQ 388
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
C G + + LFQ+M + + PD+ T+ L+ C K+EKA + F + +
Sbjct: 389 GFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNL 448
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
D Y+ +I+ + K G+ ++A F S+ G P+ T +++ L ++G EA+ ++
Sbjct: 449 DIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 508
Query: 489 KTSKERG 495
+ +E G
Sbjct: 509 RKMEEDG 515
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 222/474 (46%), Gaps = 6/474 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ + N +I+ + AY ++ +PD T+N LI+G+C V EA
Sbjct: 95 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEA 154
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ LV +M G PNV TY +++G C + + +L M ERNV + T +++
Sbjct: 155 VVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDS 214
Query: 125 VFR--CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ R C+D + L + ME + + LV N+L+ L ++ +L+ M R
Sbjct: 215 LCRDGCIDAAIS---LFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKI 271
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P TF+ + V L E + I +G+ P TY LM+ R E +
Sbjct: 272 IPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANN 331
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L+ + ++ ++ ++ +I +CKV +D ++ R++ R + N VT++ L+ G C
Sbjct: 332 MLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFC 391
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ ++ EL ++ G PD T+ ++D LC + E AL+ ++ + + + +
Sbjct: 392 QSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIV 451
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y I+I +C G V + LF + + P++ T+ +I C+ + +A M
Sbjct: 452 MYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 511
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G P++ +Y+ LI+A ++ G + + M+ G + D+ + ++++ L
Sbjct: 512 EEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 150/334 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI S YN+++ L K+ + + M+ + P+ T+N+LI + G + EA
Sbjct: 235 GIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEA 294
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L K+M G +PN TY L+DG+C R++E +L++M N P+ T SL+ G
Sbjct: 295 NELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKG 354
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +L + +R + + + L+ + A + ++M G LP+
Sbjct: 355 YCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPD 414
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L L + I + K + Y +++E + K G+ +
Sbjct: 415 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFC 474
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + NV +Y ++I CK + A + R+M + PN T+NTLI H +D
Sbjct: 475 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDG 534
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
++ + +L+ + CGF D + +ID L A
Sbjct: 535 DLTASAKLIEEMKSCGFSADASSIKMVIDMLSSA 568
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+DA+D EM+ P+ + ++ + + L +KM+ + I+ +IYT N +
Sbjct: 47 DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I FCR K A ++ LG PD +++ LI L + EA M +NGC
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
P+ T N I+ + + G A D+++ ER + F
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVF 206
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 98/202 (48%), Gaps = 6/202 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS G+ +T Y+ ++ +S +++A FQ+M PD TY IL+ G+C G
Sbjct: 371 ISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGK 430
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++AL + + ++ ++ YTI+I+G C +V + + + + + V PN T
Sbjct: 431 LEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 490
Query: 121 LVHGVFRCLDPHKAFELLIRFMER---EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
++ G+ + +A +L+R ME EP NTL+ + + +A ++ +M
Sbjct: 491 MISGLCKKGSLSEA-NILLRKMEEDGNEP--NDCTYNTLIRAHLRDGDLTASAKLIEEMK 547
Query: 178 DRGYLPESSTFDYTVTCLVTGL 199
G+ ++S+ + L + +
Sbjct: 548 SCGFSADASSIKMVIDMLSSAV 569
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 75/174 (43%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P F+ + +F LD +M G+ N T NI+I C + +
Sbjct: 63 PSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 122
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
K+ PD TFN LI C +K+ +A M+ G +P+ +Y++++ + K
Sbjct: 123 LGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICK 182
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
SG A M++ D +T + I+++L + G + A + K + +GI
Sbjct: 183 SGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 236
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/487 (26%), Positives = 227/487 (46%), Gaps = 38/487 (7%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD--QCKPDRFTYNILIHGICRI 58
+S LG P+ YN VI +L + A Q+M+ + +C PD ++N +IHG +
Sbjct: 218 MSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 277
Query: 59 GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
G V +A L+ +M G P+V TY ++D C A+ + + VL M ++ V P+ T
Sbjct: 278 GEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTY 337
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
+++HG + C K E+A + RKM
Sbjct: 338 TAIIHG-YSCSGHWK----------------------------------ESAKMFRKMTS 362
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+G +P TF+ ++ L + I +G P +Y +L+ GR +
Sbjct: 363 KGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFAD 422
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + +V+N + +N++I K MMD A + EM+ + + P++VT++TLIS
Sbjct: 423 MNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLIS 482
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP- 357
C+ + E ++ G +P+ ++S+I C A + +SEM+ G+P
Sbjct: 483 AFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPR 542
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
PN + ++ +I SLC G V + +F + P I TFN+LI +C + K+EKA
Sbjct: 543 PNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGV 602
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
+M+++G+ PD +Y+ L+ KSG+ D+ F M P + T +++L+ L
Sbjct: 603 LDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFH 662
Query: 478 QGRFEEA 484
GR A
Sbjct: 663 AGRTSAA 669
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/524 (25%), Positives = 230/524 (43%), Gaps = 44/524 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN+++DAL K+ ++D A L +QM +PD TY +IHG G E+
Sbjct: 294 GVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKES 353
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ ++M G P + T+ + C R + + + M + P+ + L+HG
Sbjct: 354 AKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHG 413
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ L M + + C N L+ + M EA + +M +G P
Sbjct: 414 -YATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRP 472
Query: 184 ESSTFDYTVTC-------------------------------LVTGL----DLNETCGIL 208
+ T+ ++ L+ G DL + ++
Sbjct: 473 DVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELV 532
Query: 209 DTFIKRGV-KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
+ +G+ +P + ++ +L GR ++ N V + ++N +ID +C
Sbjct: 533 SEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCL 592
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
V M++A + M I P++VT+NTL+SG+CK ++ L +L KP T
Sbjct: 593 VGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVT 652
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
++ ++D L A R A EM++ G + TY IL++ LC ++ LF K+
Sbjct: 653 YSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLG 712
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
A DI N +I + ++ + E+A F ++ T GL P+ +Y +I L+K G +
Sbjct: 713 AMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVE 772
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
EA F SME++GC P S N I+ L+Q+G DIVK
Sbjct: 773 EADTMFSSMEKSGCAPSSRLLNDIIRMLLQKG------DIVKAG 810
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 205/436 (47%), Gaps = 23/436 (5%)
Query: 66 RLVKQMEGLGYAP-NVYTYTILIDGFCNAKR--VAEVF--RVLEI-MKERNVCPNEATVR 119
R+ ++ G AP +V+TY IL+D C A+R + F R+L ++ R + N
Sbjct: 141 RICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANT---- 196
Query: 120 SLVHGVFRCLDPHKAFE-----LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILR 174
+CL K + LL R + + + NT++ L +S + EA +++
Sbjct: 197 -----FLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQ 251
Query: 175 KMGDRGY--LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK 232
+M G P+ +F+ + ++++ C +++ +++GV+P TY +++AL K
Sbjct: 252 RMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCK 311
Query: 233 AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
A + + L + + + +Y +I + + ++ R+M + + P +VT
Sbjct: 312 ARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVT 371
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
FN+ +S CK E+ + G PD +++ ++ RF D + M
Sbjct: 372 FNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMA 431
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
+ G+ N +NILI + G + ++ +F +MQ + PD+ T++ LI +FCRM ++
Sbjct: 432 DKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLA 491
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC-NPDSYTSNLI 471
A + F M+++GL P+ Y +LI G +AK+ M G P+ + I
Sbjct: 492 DAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSI 551
Query: 472 LETLVQQGRFEEAHDI 487
+ +L +GR +AHD+
Sbjct: 552 IHSLCNEGRVMDAHDV 567
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 142/289 (49%), Gaps = 3/289 (1%)
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD-RLVSNVNSYNMVIDCFCKVN 269
++ G++ R ++ L A R E L H D V N SYN VI C +
Sbjct: 182 LLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDS 241
Query: 270 MMDRATEICREMRDRD--IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
A ++ + M +P++V+FNT+I G K EV K L+ +++ G +PD T
Sbjct: 242 RSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVT 301
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+NS++D LC+A + A L +MV+ GV P+ +TY +I G S ++F+KM
Sbjct: 302 YNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMT 361
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ + P I TFN+ + S C+ + + AE+ F M T G PD SYS L+ GRF
Sbjct: 362 SKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFA 421
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ F SM G + + N+++ ++G +EA + + +G+
Sbjct: 422 DMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGV 470
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 180/410 (43%), Gaps = 7/410 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + +N +I A K +D A L F +M +PD TY+ LI CR+G + +A
Sbjct: 434 GIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADA 493
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVH 123
+ QM +G PN Y LI GFC + + ++ M + + PN S++H
Sbjct: 494 MEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIH 553
Query: 124 GV---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ R +D H F L+I +R + + N+L+ +A +L M G
Sbjct: 554 SLCNEGRVMDAHDVFNLVIHIGDRPTI---VTFNSLIDGYCLVGKMEKAFGVLDAMVSVG 610
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T++ V+ +++ + + + VKP TY ++++ L+ AGR
Sbjct: 611 IEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAK 670
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + ++++Y +++ C+ ++ D A + ++ D ++ NT+I+
Sbjct: 671 KMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINAL 730
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K + +L + G P+ T+ MI L + E+A S M + G P++
Sbjct: 731 YKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSS 790
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
N +IR L GD+ ++ K+ IS + T + L+ F K
Sbjct: 791 RLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGK 840
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 121/245 (49%), Gaps = 3/245 (1%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+V++Y +++DC C+ D + + + NT + C + ++L
Sbjct: 155 SVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVL 214
Query: 314 VM-LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG--VPPNTITYNILIRSL 370
+ + + G P+ ++N++I LC R ++ALD + M + G P+ +++N +I
Sbjct: 215 LHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 274
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
G+V+++ L +M + PD+ T+N+++ + C+ ++KAE M+ G+ PD
Sbjct: 275 FKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDG 334
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+Y+A+I SG + E+ + F M G P T N + +L + GR ++A +I +
Sbjct: 335 LTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQY 394
Query: 491 SKERG 495
+G
Sbjct: 395 MTTKG 399
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 9/234 (3%)
Query: 277 ICREMRDRDIAP-NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
ICRE +AP ++ T+ L+ C+ LL G + N+ + CL
Sbjct: 142 ICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCL 201
Query: 336 CRAHRFEDALDC-LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM--QADRIS 392
C A R ++A+D L M + G PN I+YN +I+SLC +L + Q+M + R S
Sbjct: 202 CHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCS 261
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PD+ +FN +I F + ++ KA M+ G+ PD +Y++++ AL K+ D+A+
Sbjct: 262 PDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELV 321
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG-----ISFKSF 501
M G PD T I+ G ++E+ + + +G ++F SF
Sbjct: 322 LRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSF 375
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 16/175 (9%)
Query: 337 RAHRF--EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV-------ARSLRLFQKM- 386
RA F +DA E++ G P + N + +L D A L LF ++
Sbjct: 84 RAGTFSTDDAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNGPALVLALFNRIC 143
Query: 387 ---QADRISP-DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
R++P ++T+ L+ CR + + F +L GLR + +K L
Sbjct: 144 REEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCH 203
Query: 443 SGRFDEAKQTFLS-MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV-KTSKERG 495
+ R DEA L M GC P++ + N ++++L R +EA D+V + +KE G
Sbjct: 204 AKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGG 258
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 147/540 (27%), Positives = 250/540 (46%), Gaps = 60/540 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +PS YNAV+ AL + S+ A M D P+ +TYNIL+ +C G +EA
Sbjct: 115 GYAPSLLAYNAVLLALSDA-SLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 65 LRLVKQ-MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L +V M G G APNV TY L+ FC A V R++ +M+E V P+ T ++V+
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
Query: 124 GV---FRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDR 179
G+ R D K F+ M RE LT V NTL+ EA A+ +M +
Sbjct: 234 GLCKAGRMEDARKMFD----EMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQK 289
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G +P+ TF + + +L ++ +RG++ T+ L++ + G +
Sbjct: 290 GVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDA 349
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + + R+ +V YN++I+ +CK+ MD A E+ EM + + P++VT++T++SG
Sbjct: 350 LLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSG 409
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+CK + EL +L+ G PD T++S+I LC R DA + +M++ G+ P+
Sbjct: 410 YCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPD 469
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN-------------------- 399
TY LI C G+V ++L L +M + PD+ T++
Sbjct: 470 EFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLF 529
Query: 400 ------------------------------ALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
AL++ F + +A+K + SML + D
Sbjct: 530 KLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLD 589
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
YS LI + G +A + + G +P+S ++ ++ L ++G EA ++++
Sbjct: 590 GSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQ 649
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 190/422 (45%), Gaps = 35/422 (8%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
GYAP++ Y ++ +A + R+L M V PN T LV
Sbjct: 115 GYAPSLLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRA---------- 163
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
L R E L + M G P T++ V
Sbjct: 164 --LCARGQREEAL----------------------GVVGDDMRGAGCAPNVVTYNTLVAA 199
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
+++ ++ + GV+P T+ ++ L KAGR + + + + ++ L +
Sbjct: 200 FCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPD 259
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
SYN ++ +CK + A + EM + + P++VTF +LI C+ + + L+
Sbjct: 260 GVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVG 319
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
+ E G + ++FTF ++ID CR +DAL + EM E + P+ + YN+LI C +G
Sbjct: 320 QMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLG 379
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
+ + L +M+A + PD+ T++ ++ +C++ + A + ML G+ PD +YS
Sbjct: 380 RMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYS 439
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
+LI+ L + R +A + F M Q G PD +T +++ ++G ++A + ++
Sbjct: 440 SLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKK 499
Query: 495 GI 496
G+
Sbjct: 500 GV 501
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 172/352 (48%), Gaps = 2/352 (0%)
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL-D 209
L N +L LS+ S+ S A +L M G P T++ V L E G++ D
Sbjct: 121 LAYNAVLLALSDASLPS-ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGD 179
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
G P TY L+ A +AG +R + + + + ++ ++N V++ CK
Sbjct: 180 DMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAG 239
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
M+ A ++ EM + P+ V++NTL+SG+CK +H+ + + + G PD TF
Sbjct: 240 RMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFT 299
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
S+I +CRA E A+ + +M E G+ N T+ LI C G + +L ++M+
Sbjct: 300 SLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMREC 359
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
RI P + +N LI +C++ ++++A + M G++PD +YS ++ K G D A
Sbjct: 360 RIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSA 419
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ M + G PD+ T + ++ L ++ R +A ++ + + G+ F
Sbjct: 420 FELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEF 471
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 142/537 (26%), Positives = 241/537 (44%), Gaps = 50/537 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G + YN ++ L + + D A FQ+M C+PD FT+ IL+ G+CR +++
Sbjct: 1 MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +L+ +M+ +G P+ Y LI G+ AK + F+ L M + + P T ++V
Sbjct: 61 ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + A +LL ++ N ++ L EA +L +M RGY P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKR-GVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+ T++ + L ++E F+ R V P +Y ++ L K+G R
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEA----RKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRM 236
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L+H+ +V +Y+ +ID FCK ++RA + M PN+V +N+L+ +
Sbjct: 237 LDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHR 296
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ K ++LV + GF PD ++N+ ID LC+A R + A MVE G PN +
Sbjct: 297 LGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASS 356
Query: 363 YNILI----------RSLCAIGDVARSLRLFQKMQADRI-SPDIYTFNALIQSFCRMNKI 411
Y++LI LC G + LF K+ ++I PD++ +N ++ S C+ +I
Sbjct: 357 YSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQI 416
Query: 412 EK----------------------------------AEKAFFSMLTLGLRPDNFSYSALI 437
+K AE +M+ G PD +Y L+
Sbjct: 417 DKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLV 476
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
A+ K G+ A + F + GC PD T + ++ LV + EEA+ + ER
Sbjct: 477 DAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVER 533
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 233/502 (46%), Gaps = 19/502 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P +YNA+I K+ A+ +M + C P TY ++ G+C+ +
Sbjct: 71 MGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRD 130
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A++L+ +M G +PN+YTY ++++G C +++ E ++LE M R P+ T S +
Sbjct: 131 AVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIK 190
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ +C +A +F+ R P+T +V T++ L + A+ +L M +RG
Sbjct: 191 GLCKCDRVDEAR----KFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCT 246
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ T+ + G ++ G+LD+ +K G +P Y L+ AL++ G + +
Sbjct: 247 PDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDM 306
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI----- 297
L + + +V SYN ID CK + +A + M +R PN +++ LI
Sbjct: 307 LVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILL 366
Query: 298 -----SGHCKDAEVHKTRELLVMLLECGF-KPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
G CK + L +L+ +PD F +N M+D C+ + + AL +M
Sbjct: 367 YTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM 426
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
+E N +T+NIL+ LC ++ + + M + PD T+ L+ + C+ K
Sbjct: 427 LEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKS 485
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
A + F + G PD +YSALI L+ +EA F + + PD T L+
Sbjct: 486 AAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLL 545
Query: 472 LE--TLVQQGRFEEAHDIVKTS 491
L+ + R E D+ T+
Sbjct: 546 HRKLKLLNKPRKAEVVDLYLTT 567
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 123/244 (50%), Gaps = 3/244 (1%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV +YN ++ + + D+A+ + +EM D+ P+ TF L+ G C+ ++ K R+LL
Sbjct: 6 NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ E G PD +N++I +A F A L+EMV+ P +TY ++ LC
Sbjct: 66 GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKA 125
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
+++L +M+ SP+IYT+N +++ C K+++A+K M G PD +Y
Sbjct: 126 ERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTY 185
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
++ IK L K R DEA++ M PD + ++ L + G + A ++
Sbjct: 186 NSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSN 242
Query: 494 RGIS 497
RG +
Sbjct: 243 RGCT 246
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 135/296 (45%), Gaps = 3/296 (1%)
Query: 202 NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
++ + I + +P T+ +L+ L ++ + + + L + + V + YN +
Sbjct: 24 DKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNAL 83
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
I + K +A + EM P +VT+ ++ G CK +LL + + G
Sbjct: 84 ISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGC 143
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
P+ +T+N +++ LC + ++A L EM G P+ +TYN I+ LC V + +
Sbjct: 144 SPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARK 203
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
+M ++PD+ ++ +I C+ ++ A + M G PD +YS+LI
Sbjct: 204 FLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFC 260
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
K G + A SM + GC P+ N +L L + G +A D++ + RG +
Sbjct: 261 KGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFT 316
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 95/187 (50%), Gaps = 5/187 (2%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G++ + FT+N ++ L R HR + A EM++ P+ T+ IL+R LC + ++
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+L +M+ PD +NALI + + +A K M+ P +Y+ ++
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG---- 495
L K+ R +A + M GC+P+ YT N+I+E L ++ + +EA +++ RG
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181
Query: 496 -ISFKSF 501
+++ SF
Sbjct: 182 VVTYNSF 188
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 222/471 (47%), Gaps = 35/471 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P N ++ +K N +++A++ + +M + +T+NI+++ +C+ G + +A
Sbjct: 209 GIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKA 268
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ MEGLG+ PNV +Y +I G+ + + R+L+ M+ + + P+ T SL+ G
Sbjct: 269 REFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISG 328
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + EA+ + KM + G +P
Sbjct: 329 MCK-----------------------------------EGRLEEASGLFDKMVEIGLVPN 353
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + DL D +K+G+ P STY LL+ AL+ GR E D +
Sbjct: 354 AVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIK 413
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K ++ + +YN++I+ + + +A ++ EM + I P VT+ +LI +
Sbjct: 414 EMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRN 473
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + +L +L+ G PD FN+M+D C E A L EM VPP+ +T+N
Sbjct: 474 RMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFN 533
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L++ C G V + L +M+ I PD ++N LI + R I+ A + ML++
Sbjct: 534 TLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSI 593
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G P +Y+ALIK L K+ D A++ M G +PD T ++E +
Sbjct: 594 GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 214/451 (47%), Gaps = 2/451 (0%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
+++L+ C + DEA + M+ G P + T ++ F R+ + + M
Sbjct: 182 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 241
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMA 166
+ T +V+ + + KA E I FME +V NT+++ S+
Sbjct: 242 RLRISSTVYTFNIMVNVLCKEGKLKKAREF-IGFMEGLGFKPNVVSYNTIIHGYSSRGNI 300
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
A IL M +G P+S T+ ++ + L E G+ D ++ G+ P TY L
Sbjct: 301 EGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL 360
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ G Y + + K ++ +V++YN+++ M A ++ +EMR + I
Sbjct: 361 IDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI 420
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P+ +T+N LI+G+ + K +L +L G +P T+ S+I L R +R ++A D
Sbjct: 421 IPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADD 480
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
++++ GV P+ I +N ++ CA G+V R+ L ++M + PD TFN L+Q C
Sbjct: 481 LFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRC 540
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R K+E+A M G++PD+ SY+ LI + G +A + M G NP
Sbjct: 541 REGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLL 600
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T N +++ L + + A +++K +GIS
Sbjct: 601 TYNALIKCLCKNQEGDLAEELLKEMVNKGIS 631
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 187/404 (46%), Gaps = 39/404 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P+ YN +I +I+ A M V +PD +TY LI G+C+ G ++E
Sbjct: 278 LGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEE 337
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L +M +G PN TY LIDG+CN + F + M ++ + P+ +T LVH
Sbjct: 338 ASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVH 397
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ FME EA ++++M +G +P
Sbjct: 398 AL---------------FME--------------------GRMGEADDMIKEMRKKGIIP 422
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ T++ + + + + + + +G++P TY L+ L + R E D
Sbjct: 423 DAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLF 482
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +V +N ++D C ++RA + +EM + + P+ VTFNTL+ G C++
Sbjct: 483 EKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 542
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V + R LL + G KPD ++N++I R +DA EM+ G P +TY
Sbjct: 543 GKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTY 602
Query: 364 NILIRSLC--AIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
N LI+ LC GD+A L ++M ISPD T+ +LI+
Sbjct: 603 NALIKCLCKNQEGDLAE--ELLKEMVNKGISPDDSTYLSLIEGM 644
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%)
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
RDR + + F+ L+ C+ + + M+ E G P T N M+ + +R
Sbjct: 171 RDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRM 230
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
E A +EM + T+NI++ LC G + ++ M+ P++ ++N +
Sbjct: 231 EMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTI 290
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I + IE A + +M G+ PD+++Y +LI + K GR +EA F M + G
Sbjct: 291 IHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGL 350
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
P++ T N +++ +G E A ++GI
Sbjct: 351 VPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGI 385
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P YN +I + I A+ +M P TYN LI +C+ D A
Sbjct: 559 GIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLA 618
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE 98
L+K+M G +P+ TY LI+G N + E
Sbjct: 619 EELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 652
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 231/494 (46%), Gaps = 5/494 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG S + YN +++ ++ I+ A M PD FT+N LI +C G V +
Sbjct: 124 LGASATVVTYNTMVNGYCRAGRIEDARRLISGMPF---PPDTFTFNPLIRALCVRGRVPD 180
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL + M G +P+V TY+IL+D C A + +L+ M+ + P+ T L++
Sbjct: 181 ALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLIN 240
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ D +A +L + +L L + E + +M P
Sbjct: 241 AMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAP 300
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF+ VT L ++ ++D + G P TY +++ L GR + L
Sbjct: 301 DEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELL 360
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + +Y V+ C + + A E+ EM D P+ VTFNT+I+ C+
Sbjct: 361 SRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQK 420
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V + +++ + E G PD T+NS+ID LC +DA++ LS + +G P+ +T+
Sbjct: 421 GLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTF 480
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L++ LC++ + +L M PD TFN +I S C+ + +A + M
Sbjct: 481 NTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAE 540
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G P+ +Y+ ++ AL+K+G+ EA + LS NG PD T N ++ + + G+ EE
Sbjct: 541 NGCIPNQSTYNIVVDALLKAGKTQEALK-LLSGMTNG-TPDLITYNTVISNITKAGKMEE 598
Query: 484 AHDIVKTSKERGIS 497
A D+++ G+S
Sbjct: 599 ALDLLRVMVSNGLS 612
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 216/452 (47%), Gaps = 2/452 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y V+ +L S F +M+ ++C PD T+N ++ +C+ G+VD A
Sbjct: 262 GCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRA 321
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++V M G P++ TY+ ++DG C+ RV + +L +K P+ +++ G
Sbjct: 322 IKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKG 381
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A EL+ + + ++ NT++ L + A ++ +M + G P+
Sbjct: 382 LCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPD 441
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L +++ +L G KP T+ L++ L R + ++ +
Sbjct: 442 IVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMV 501
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
++ + ++N VI C+ ++ +A E + M + PN T+N ++ K
Sbjct: 502 NMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAG 561
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + +LL + PD T+N++I + +A + E+ALD L MV G+ P+TITY
Sbjct: 562 KTQEALKLLSGMTN--GTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYR 619
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L +C R++R+ ++Q +SPD +N ++ FC+ + + A F M++
Sbjct: 620 SLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSS 679
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
G PD +Y L++AL DEAKQ +++
Sbjct: 680 GCMPDESTYIILLEALAYECLLDEAKQLLVNL 711
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/530 (23%), Positives = 233/530 (43%), Gaps = 33/530 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SPS Y+ ++DA K++ A + +M C+PD TYN+LI+ +C G VDEA
Sbjct: 192 GCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEA 251
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++ + G P+ TYT ++ C ++R EV + M P+E T ++V
Sbjct: 252 LNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTS 311
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A +++ E + + +++L L + +A +L ++ G P+
Sbjct: 312 LCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPD 371
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + L + ++ + P T+ ++ +L + G + +
Sbjct: 372 TIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVE 431
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ ++ +YN +ID C +D A E+ ++ P++VTFNTL+ G C
Sbjct: 432 QMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVD 491
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT---- 360
+L+V ++ PD TFN++I LC+ A++ L M E G PN
Sbjct: 492 RWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYN 551
Query: 361 -----------------------------ITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
ITYN +I ++ G + +L L + M ++ +
Sbjct: 552 IVVDALLKAGKTQEALKLLSGMTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGL 611
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
SPD T+ +L CR + ++A + + +GL PD Y+ ++ ++ R D A
Sbjct: 612 SPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAID 671
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
F M +GC PD T ++LE L + +EA ++ G+ KS
Sbjct: 672 CFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGVLDKSL 721
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 11/166 (6%)
Query: 335 LCRAHRFEDALDCLSEMVEWG-----VPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
L + +DAL + + G +P + NILI+ LC+ G VA + R+F + A
Sbjct: 68 LIQREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATLGA- 126
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
S + T+N ++ +CR +IE A + M PD F+++ LI+AL GR +A
Sbjct: 127 --SATVVTYNTMVNGYCRAGRIEDARRLISGM---PFPPDTFTFNPLIRALCVRGRVPDA 181
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
F M GC+P T +++L+ + + +A ++ + +G
Sbjct: 182 LAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKG 227
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP YN ++ ++ D+A F M C PD TY IL+ + ++DE
Sbjct: 644 MGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDE 703
Query: 64 ALRLVKQMEGLG 75
A +L+ + LG
Sbjct: 704 AKQLLVNLCSLG 715
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 212/469 (45%), Gaps = 38/469 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ + Y +I+ L K+ LA +K + CK D FTY ++I +C+ G+ EA
Sbjct: 107 GLFGDAKTYGILINGLCKARKTGLA-IKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEA 165
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + +M G G P+V Y+ L+DG C R+ E + M+ R + + T SL+HG
Sbjct: 166 LDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHG 225
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
LS + E L M DRG+ P+
Sbjct: 226 -----------------------------------LSRAGLWKEVTWFLNLMVDRGFSPD 250
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ TF + L + E IL+ +G +P TY LM L G+ +E L
Sbjct: 251 AFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQ-LEDATKLF 309
Query: 245 HVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
DR + NV SYN++I+ +CK +D A + EMR + + P+ VT+NTLI C+
Sbjct: 310 ESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQS 369
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V ++L V + CG T+ ++D LC+ E+A+D + + PN +
Sbjct: 370 GRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVF 429
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+IL+ +C G + + + F ++ + + PD +N LI C + +A K + M
Sbjct: 430 SILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEE 489
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
G PD+ +++ +I+ L+K EA Q M +PD ++++L
Sbjct: 490 KGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 219/493 (44%), Gaps = 36/493 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P ++ + N I A F +M+ D TY ILI+G+C+ A
Sbjct: 72 GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L ++M+G +V+TY ++ID C E + M + P+ SL+ G
Sbjct: 132 IKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 190
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R RL EA ++M RG +
Sbjct: 191 LCR-----------------------------FGRLK------EALEFFKEMEGRGISAD 215
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L E L+ + RG P T+ +L++ L K G+ E + L
Sbjct: 216 VYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILE 275
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ +YN +++ C V ++ AT++ + DR I N+ ++N LI+G+CKD
Sbjct: 276 LMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQ 335
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + L + G KP T+N++I LC++ R A EM G TY
Sbjct: 336 KIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYC 395
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+L+ LC G + ++ LFQ ++ P+I F+ L+ CR K+E+A K F +
Sbjct: 396 VLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKN 455
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL PD +Y+ LI L G EA + ME+ GC PDS T N+I++ L+++ EA
Sbjct: 456 GLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEA 515
Query: 485 HDIVKTSKERGIS 497
+++ + R S
Sbjct: 516 IQLLEEMRNRNFS 528
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 167/354 (47%), Gaps = 4/354 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQC-KPDRFTYNILIHGICRIGVVDE 63
GIS YN++I L ++ + F + VD+ PD FT+ ILI G+C+ G V E
Sbjct: 211 GISADVYTYNSLIHGLSRA-GLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGE 269
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++++ M G P++ TY L++G C ++ + ++ E + +R + N + L++
Sbjct: 270 AQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILIN 329
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + +AF L + + NTL+ L + A + +M G
Sbjct: 330 GYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFL 389
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ST+ + L L E + + K KP + +L++ + +AG+ E +
Sbjct: 390 KLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQF 449
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K+ L + +YN++I+ C M+ A ++ +M ++ P+ +TFN +I K+
Sbjct: 450 DEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKE 509
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH-RFEDALDCLSEMVEWGV 356
E+H+ +LL + F PD+ SM+ CL ++ AL L ++ GV
Sbjct: 510 NEIHEAIQLLEEMRNRNFSPDE-AVTSMLLCLASFDPQWHAALVSLPNALQKGV 562
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 118/233 (50%), Gaps = 1/233 (0%)
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
N + A ++ EM ++ + + T+ LI+G CK + +L + + K D FT+
Sbjct: 91 NGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTY 149
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+ID LC+ +ALD SEM+ G+ P+ + Y+ L+ LC G + +L F++M+
Sbjct: 150 GMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEG 209
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
IS D+YT+N+LI R ++ M+ G PD F+++ LI L K G+ E
Sbjct: 210 RGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGE 269
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
A+Q M G PD T N ++ L G+ E+A + ++ +RGI F
Sbjct: 270 AQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVF 322
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 1/185 (0%)
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
L+ GF+PD T +++ + + DA+ EM E G+ + TY ILI LC
Sbjct: 69 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+++L +KM+ + D++T+ +I S C+ +A F M+ G+ PD YS+L
Sbjct: 129 GLAIKLHEKMKGN-CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ L + GR EA + F ME G + D YT N ++ L + G ++E + +RG
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 247
Query: 497 SFKSF 501
S +F
Sbjct: 248 SPDAF 252
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS G+ P T YN +I+ L + A QM C PD T+N++I + +
Sbjct: 452 ISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENE 511
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILI 87
+ EA++L+++M ++P+ ++L+
Sbjct: 512 IHEAIQLLEEMRNRNFSPDEAVTSMLL 538
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/498 (25%), Positives = 222/498 (44%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F G P T YN+++ K+ A ++M + C PD TYN L R G
Sbjct: 312 LKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGF 371
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+DE + ++ M G PN TYT +ID + A R + R+ +MK+ PN T S
Sbjct: 372 LDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNS 431
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ + + ++L + NT+L S + +LR+M + G
Sbjct: 432 VLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCG 491
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ P+ TF+ ++ ++ + +K G P +TY L+ AL + G +
Sbjct: 492 FEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAE 551
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + N NSY++++ C+ K + ++ +E+ D + P+ + TL+ +
Sbjct: 552 SVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTN 611
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K + L + G+KPD NSM+ R F A + L + E G+ PN
Sbjct: 612 HKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNL 671
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
TYN L+ G+ ++ + + +Q PD+ ++N +I+ FCR +++A
Sbjct: 672 FTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSE 731
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M T G++P +Y+ + FDEA + M ++ C P T ++++ + G+
Sbjct: 732 MTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGK 791
Query: 481 FEEAHDIVKTSKERGISF 498
+EEA D V KE ISF
Sbjct: 792 YEEAMDFVSKIKELDISF 809
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 124/534 (23%), Positives = 245/534 (45%), Gaps = 44/534 (8%)
Query: 4 LGISPSTRLYNAVIDALVK----SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
G + RL N V++ +V+ + +A F + V++ D Y ++H R G
Sbjct: 170 FGSDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTG 229
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE-VFRVLEIMKERNVCPNEATV 118
A+ L +M+ +G P + TY +++D + R + + +L+ M+ + + +E T
Sbjct: 230 KYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTC 289
Query: 119 RSLVHGVFR--CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
+++ R LD + F ++F +P T + N++L + +EA +IL++M
Sbjct: 290 STVISACGREGMLDEARKFLAELKFNGYKPGT--VTYNSMLQVFGKAGIYTEALSILKEM 347
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
D P+S T++ V L+E ++DT +GV P TY +++A KAGR+
Sbjct: 348 EDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGRE 407
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
+ R + + NV +YN V+ K + + ++ EM+ APN T+NT+
Sbjct: 408 DDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTM 467
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
++ ++ + + ++L + CGF+PDK TFN++I R D+ EMV+ G
Sbjct: 468 LAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGF 527
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR------MNK 410
P TYN L+ +L GD + + Q M+ P+ +++ L+ + + + K
Sbjct: 528 TPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEK 587
Query: 411 IEKA-----------------------------EKAFFSMLTLGLRPDNFSYSALIKALI 441
+EK E+AF + G +PD ++++
Sbjct: 588 VEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFA 647
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
++ F +A++ + + G P+ +T N +++ V++G +A +++K + G
Sbjct: 648 RNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSG 701
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 180/457 (39%), Gaps = 70/457 (15%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P + YN + V++ +D M+ P+ TY +I + G D+ALRL
Sbjct: 354 PDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRL 413
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL------ 121
M+ LG APNVYTY ++ R +V +VL MK PN AT ++
Sbjct: 414 FSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSE 473
Query: 122 ------VHGVFR-----CLDPHK-AFELLIRFMER---EPLTQKL--------------V 152
V+ V R +P K F LI R E + K+
Sbjct: 474 EGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTT 533
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCL-----VTGLD------- 200
N LL L+ A ++++ M +G+ P +++ + C V G++
Sbjct: 534 YNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIY 593
Query: 201 ----------------LNETCGIL-------DTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
N C L D K G KP ++ +
Sbjct: 594 DGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFS 653
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ L+ + + L N+ +YN ++D + + +A E+ + +++ P++V++NT+I
Sbjct: 654 KAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVI 713
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G C+ + + +L + G +P T+N+ + F++A + + M+E
Sbjct: 714 KGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCR 773
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
P+ +TY IL+ C G ++ K++ IS D
Sbjct: 774 PSELTYKILVDGYCKAGKYEEAMDFVSKIKELDISFD 810
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 150/335 (44%), Gaps = 8/335 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNS-IDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P +N +I A + S +D A + + +M P TYN L++ + R G
Sbjct: 491 GFEPDKDTFNTLISAYARCGSEVDSAKM-YGEMVKSGFTPCVTTYNALLNALARRGDWKA 549
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +++ M G+ PN +Y++L+ + A V + +V + + + +V P+ +R+LV
Sbjct: 550 AESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVL 609
Query: 124 GVFRCL---DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+C +AF+ L ++ + L +V N++L + N M S+A +L + + G
Sbjct: 610 TNHKCRHLRGMERAFDQLQKYGYKPDL---VVINSMLSMFARNKMFSKAREMLHFIHECG 666
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P T++ + V + + +L G +P +Y +++ + G E
Sbjct: 667 LQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAI 726
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L+ + + + +YN + + + + D A E+ R M + + P+ +T+ L+ G+
Sbjct: 727 GVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGY 786
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
CK + + + + + E D + + C+
Sbjct: 787 CKAGKYEEAMDFVSKIKELDISFDDQSVKRLGSCI 821
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 87/174 (50%), Gaps = 1/174 (0%)
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG-DVARSLRL 382
D + +++ R +++ A+D +M E G+ P +TYN+++ +G R L L
Sbjct: 214 DVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILEL 273
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
+M++ + D +T + +I + R +++A K + G +P +Y+++++ K
Sbjct: 274 LDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGK 333
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+G + EA ME N C PDS T N + T V+ G +E ++ T +G+
Sbjct: 334 AGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGV 387
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/479 (26%), Positives = 233/479 (48%), Gaps = 8/479 (1%)
Query: 19 ALVKSNSIDLAYLKFQQMSVDQCK--PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGY 76
+LV+ ID A + F M+ + P NILI +C G V +A R+ LG
Sbjct: 159 SLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERV---FAALGP 215
Query: 77 APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFE 136
+ V TY +++G+C A R+ + R++ M P+ T L+ + A
Sbjct: 216 SATVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDALA 272
Query: 137 LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLV 196
+ + R + + LL S +A A+L +M +G P+ T++ + +
Sbjct: 273 VFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMC 332
Query: 197 TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVN 256
D++E IL G KP TY ++++L + R E + L + + +
Sbjct: 333 NEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEV 392
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
++N ++ C+ ++DRA E+ M + ++VT+++++ G C V ELL L
Sbjct: 393 TFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRL 452
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
G KPD + +++ LC ++E A + ++EM+ PP+ +T+N ++ SLC G V
Sbjct: 453 KSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLV 512
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
R++R+ ++M + SPDI T+N +I C + I+ A + + + G +PD +++ L
Sbjct: 513 DRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTL 572
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+K L R+++A+Q +M ++ C PD T N ++ +L Q+G +A + +K E G
Sbjct: 573 LKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENG 631
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 226/493 (45%), Gaps = 5/493 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG S + YN +++ ++ I+ A M PD FT+N LI +C G + +
Sbjct: 213 LGPSATVVTYNTMVNGYCRAGRIEDARRLINGMPF---PPDTFTFNPLIRALCVRGRIPD 269
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL + M G +P+V TY+IL+D C + +L+ M+ + P+ T L++
Sbjct: 270 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLIN 329
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ D +A +L + +L L + E +L +M P
Sbjct: 330 AMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAP 389
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF+ VT L ++ ++D + G TY +++ L GR + L
Sbjct: 390 DEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELL 449
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + +Y V+ C +RA E+ EM D P+ VTFNT+++ C+
Sbjct: 450 SRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQK 509
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V + ++ + E G PD T+N +ID LC +DA++ LS++ G P+ +T+
Sbjct: 510 GLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTF 569
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L++ LC + + +L M PD TFN +I S C+ + +A + M
Sbjct: 570 NTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAE 629
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G P++ +YS ++ AL+K+G+ A + LS NG PD T N ++ L + G+ EE
Sbjct: 630 NGCVPNSSTYSIVVDALLKAGKAQAALE-LLSGMTNG-TPDLITYNTVISNLTKAGKMEE 687
Query: 484 AHDIVKTSKERGI 496
A D+++ G+
Sbjct: 688 ALDLLRVMVSNGL 700
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 128/525 (24%), Positives = 232/525 (44%), Gaps = 33/525 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SPS Y+ ++DA K + A +M C+PD TYN+LI+ +C G VDEA
Sbjct: 281 GCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEA 340
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++ + G P+ TYT ++ C ++R EV +L M N P+E T ++V
Sbjct: 341 LNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTS 400
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A E++ E + + +++L L + +A +L ++ G P+
Sbjct: 401 LCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPD 460
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + L + ++ + P T+ ++ +L + G R +
Sbjct: 461 TIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVE 520
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ ++ +YN +ID C + +D A E+ +++ P++VTFNTL+ G C
Sbjct: 521 QMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVD 580
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT---- 360
+L+ ++ PD+ TFN++I LC+ A++ L M E G PN+
Sbjct: 581 RWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYS 640
Query: 361 -----------------------------ITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
ITYN +I +L G + +L L + M ++ +
Sbjct: 641 IVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGL 700
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
PD T+ +L CR + ++A + + GL PD Y+ ++ + R D A
Sbjct: 701 CPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAID 760
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
F M +GC PD T ++LE L G +EA ++ + G+
Sbjct: 761 CFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGV 805
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 227/497 (45%), Gaps = 2/497 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I+ + P T +N +I AL I A F M C P TY+IL+ C+
Sbjct: 242 INGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESG 301
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+A+ L+ +M G P++ TY +LI+ CN V E +L + P+ T
Sbjct: 302 YRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTP 361
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ + + ELL ++ NT++ L + A ++ M + G
Sbjct: 362 VLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHG 421
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ + T+ + L +++ +L G KP Y +++ L + +
Sbjct: 422 CVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAE 481
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + ++N V+ C+ ++DRA + +M + +P++VT+N +I G
Sbjct: 482 ELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGL 541
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C ++ + ELL L CG KPD TFN+++ LC R+EDA ++ M+ PP+
Sbjct: 542 CNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDE 601
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+T+N +I SLC G + +++ + M + P+ T++ ++ + + K + A + S
Sbjct: 602 LTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALE-LLS 660
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+T G PD +Y+ +I L K+G+ +EA M NG PD+ T + + ++
Sbjct: 661 GMTNG-TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDG 719
Query: 481 FEEAHDIVKTSKERGIS 497
+ A +++ ++ G+S
Sbjct: 720 TDRAVRMLRRVQDTGLS 736
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 168/345 (48%), Gaps = 6/345 (1%)
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
CN L+ RL ++ S+A + +G + T++ V + + +++
Sbjct: 190 CNILIKRLCSDGRVSDAERVFAALGPSATV---VTYNTMVNGYCRAGRIEDARRLINGM- 245
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
P T+ L+ AL GR + + + +V +Y++++D CK +
Sbjct: 246 --PFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYR 303
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
+A + EMR + P++VT+N LI+ C + +V + +L L G KPD T+ ++
Sbjct: 304 QAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVL 363
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
LC + R+++ + L+EM P+ +T+N ++ SLC G V R++ + M
Sbjct: 364 KSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCV 423
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
DI T+++++ C + +++ A + + + G +PD +Y+ ++K L + +++ A++
Sbjct: 424 ADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEEL 483
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M + C PD T N ++ +L Q+G + A +V+ E G S
Sbjct: 484 MAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCS 528
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 219/478 (45%), Gaps = 35/478 (7%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP+ YN VID K ++ A F++M PD TYN ++H +C+ +D+A
Sbjct: 219 SPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEA 278
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++QM PN +TY LI G+ + + E RV + M+ ++ P+ T+
Sbjct: 279 FLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL-------- 330
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ L+ L EA + M +G P+
Sbjct: 331 ---------------------------SMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 363
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+++ + T L + + D + G+ P F T+ +L++A G + N +
Sbjct: 364 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 423
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ +V +Y VI C++ MD A E +M D+ +AP+ +N LI G C +
Sbjct: 424 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSL 483
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
K +EL+ ++ G D F+S+I+ LC+ R DA + V G+ P+ + YN+L
Sbjct: 484 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNML 543
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ C +G + ++LR+F M + I P++ + L+ +C++ +I++ F ML G+
Sbjct: 544 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGI 603
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+P YS +I L ++GR AK F M ++G D T N++L L + F+EA
Sbjct: 604 KPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEA 661
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 216/460 (46%), Gaps = 2/460 (0%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGY--APNVYTYTILIDGFCNAKRVAE 98
C PD F+Y+IL+ +C G +A L++ M G +PNV Y +IDGF V +
Sbjct: 181 CVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNK 240
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
+ + M +R + P+ T S+VH + + KA L + + + L N L+Y
Sbjct: 241 ACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIY 300
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
S+ EA + ++M LP+ T + L + E + DT +G P
Sbjct: 301 GYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP 360
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
+Y +++ G V+ + + D + + ++N++I + M+D+A I
Sbjct: 361 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIF 420
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
EMRD + P++VT+ T+I+ C+ ++ E +++ G PDK+ +N +I C
Sbjct: 421 NEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTH 480
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
A + +SE++ G+ + + ++ +I +LC +G V + +F + PD +
Sbjct: 481 GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVY 540
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
N L+ +C + K+EKA + F +M++ G+ P+ Y L+ K GR DE F M Q
Sbjct: 541 NMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQ 600
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
G P + ++I++ L + GR A E GI+
Sbjct: 601 RGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAM 640
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 140/539 (25%), Positives = 243/539 (45%), Gaps = 43/539 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P YN+V+ AL K+ ++D A +QM + P+ +TYN LI+G G EA
Sbjct: 252 GIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEA 311
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+R+ K+M P+V T ++L+ C ++ E V + M + P+ + +++G
Sbjct: 312 VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNG 371
Query: 125 VFR--CL-DPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRG 180
CL D F+L++ + + N L+ +N M +A I +M D G
Sbjct: 372 YATKGCLVDMTDLFDLMLG----DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 427
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T+ + L +++ + I +GV P Y L++ G ++
Sbjct: 428 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAK 487
Query: 241 R----------YLNHVFKDRLVSN-----------------VNS--------YNMVIDCF 265
+L+ VF +++N VN YNM++D +
Sbjct: 488 ELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGY 547
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C V M++A + M I PN+V + TL++G+CK + + L +L+ G KP
Sbjct: 548 CLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPST 607
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
++ +ID L A R A EM E G+ + TYNI++R L ++ LF++
Sbjct: 608 ILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKE 667
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
++A + +I T N +I + ++E+A+ F S+ L P +YS +I LIK G
Sbjct: 668 LRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGL 727
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFPGL 504
+EA+ F SM+ GC P+S N ++ L+++ A + ER S + +
Sbjct: 728 VEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAM 786
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 176/404 (43%), Gaps = 6/404 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P +N +I A +D A + F +M KPD TY +I +CRIG +D+A
Sbjct: 392 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 451
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ QM G AP+ Y Y LI GFC + + ++ + + + S+++
Sbjct: 452 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 511
Query: 125 V---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ R +D F+L + + P +V N L+ +A + M G
Sbjct: 512 LCKLGRVMDAQNIFDLTVN-VGLHP--DAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 568
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P + V ++E + ++RG+KP Y ++++ L++AGR V
Sbjct: 569 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKM 628
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + + + ++ +YN+V+ K D A + +E+R ++ N++T NT+I G
Sbjct: 629 KFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMF 688
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ V + ++L + P T++ MI L + E+A D S M G PN+
Sbjct: 689 QTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSR 748
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
N ++R L ++ R+ K+ S + T L+ F
Sbjct: 749 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLF 792
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 144/321 (44%), Gaps = 38/321 (11%)
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
R + P TY +LM+ +A R + + + L N+ N +++ FC+ D
Sbjct: 108 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 167
Query: 274 ATEI------------------------CREMRDRDI--------------APNLVTFNT 295
A +I C + + +PN+V +NT
Sbjct: 168 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 227
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
+I G K+ +V+K +L +++ G PD T+NS++ LC+A + A L +MV
Sbjct: 228 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 287
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
V PN TYN LI + G ++R+F++M+ I PD+ T + L+ S C+ KI++A
Sbjct: 288 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 347
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
F +M G PD FSY+ ++ G + F M +G PD YT N++++
Sbjct: 348 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY 407
Query: 476 VQQGRFEEAHDIVKTSKERGI 496
G ++A I ++ G+
Sbjct: 408 ANCGMLDKAMIIFNEMRDHGV 428
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 96/239 (40%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ Y +++ K ID F++M KP Y+I+I G+ G A
Sbjct: 567 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPA 626
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+M G A ++ TY I++ G + E + + ++ NV N T+ +++ G
Sbjct: 627 KMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 686
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F+ +A +L + + + ++ L + EA + M + G P
Sbjct: 687 MFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 746
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
S ++ V L+ ++ L +R T +LL++ G E R+L
Sbjct: 747 SRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 805
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/500 (27%), Positives = 231/500 (46%), Gaps = 10/500 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P T YN +I + K + A+ F+ + +P+ FT N L+ G CR G + +A
Sbjct: 178 GLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKA 237
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L M +G N Y+YTILI G C AK V E + +MK PN L+ G
Sbjct: 238 CWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISG 297
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A L + + + N ++ S ++A I M G P+
Sbjct: 298 LCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 357
Query: 185 SSTFDYTVTCLVTGL---DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
D+T L+ GL E +L+ +K G P T+ L+ A + + R
Sbjct: 358 ----DWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALR 413
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
N + + ++ + +I+ K + + A E+ E+ + PN++T+ ++I G+C
Sbjct: 414 MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYC 473
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K +V E+L M+ G +P+ +T+NS++ L + + A+ L++M + G+ PN I
Sbjct: 474 KSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 533
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY L++ C D + RLF+ M+ + + PD + + L + C K +AE+A+ +
Sbjct: 534 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC---KAGRAEEAYSFI 590
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ G+ Y+ LI K+G D A M GC PDSYT +++L L +Q R
Sbjct: 591 VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRL 650
Query: 482 EEAHDIVKTSKERGISFKSF 501
EA I+ RGI F
Sbjct: 651 NEALPILDQMSLRGIKCTIF 670
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 129/526 (24%), Positives = 234/526 (44%), Gaps = 35/526 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P T NA++ ++ + A F M + C+ + ++Y ILI G+C V EA
Sbjct: 213 GLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREA 272
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L M+ G +PNV +T LI G C + RV + + + M + V P+ T +++ G
Sbjct: 273 LVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVG 332
Query: 125 VFRCLDPHKAFELLIRFMEREPL-TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + A ++ ME+ NTL+Y L + EA +L G+ P
Sbjct: 333 YSKLGRMNDALKI-KELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTP 390
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
TF + ++ + + + K + L+ +L K R E L
Sbjct: 391 TVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELL 450
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + + LV NV +Y +ID +CK +D A E+ + M PN T+N+L+ G KD
Sbjct: 451 NEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKD 510
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++HK LL + + G P+ T+ +++ C H F++A M + G+ P+ Y
Sbjct: 511 KKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAY 570
Query: 364 NILIRSLCAIGDVARSLR--------------------------------LFQKMQADRI 391
+L +LC G + L ++M +
Sbjct: 571 AVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGC 630
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
+PD YT++ L+ + C+ ++ +A M G++ F+Y+ LI +++ G+ D AK+
Sbjct: 631 TPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKR 690
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ M +G P + T + + + ++GR E+A D++ + G++
Sbjct: 691 MYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVA 736
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/522 (25%), Positives = 223/522 (42%), Gaps = 54/522 (10%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS G+ P+ Y ++ID KS +D+A + M D C+P+ +TYN L++G+ +
Sbjct: 453 ISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKK 512
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ +A+ L+ +M+ G PNV TYT L+ G C+ FR+ E+M++ + P+E
Sbjct: 513 LHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAV 572
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L + + +A+ ++R + K+ TL+ S AA ++ +M D G
Sbjct: 573 LTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG 629
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+S T+ + L LNE ILD RG+K Y +L++ + + G+
Sbjct: 630 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 689
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI--- 297
R N + + +Y + I+ +CK ++ A ++ +M +AP++VT+N LI
Sbjct: 690 RMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGC 749
Query: 298 ------------------------------------------------SGHCKDAEVHKT 309
SG E+ T
Sbjct: 750 GHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDIT 809
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+LL +++ G P T++S+I C+A R E+A L M G+ PN Y +LI+
Sbjct: 810 WQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKC 869
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
C ++L M P + ++ L+ C EK + F +L LG D
Sbjct: 870 CCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHD 929
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
++ L L+K+G D Q ME+ C S T L+
Sbjct: 930 EVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALV 971
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 142/545 (26%), Positives = 233/545 (42%), Gaps = 57/545 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS YNA+I K ++ A + M + C PD +TYN LI+G+C +EA
Sbjct: 318 GVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEA 376
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAK------------------------------ 94
L+ G+ P V T+T LI+G+C A+
Sbjct: 377 EELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINS 436
Query: 95 -----RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT- 148
R+ E +L + + PN T S++ G + A E+L + MER+
Sbjct: 437 LIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL-KMMERDGCQP 495
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
N+L+Y L + +A A+L KM G +P T+ + D + +
Sbjct: 496 NAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF 555
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ + G+KP Y +L +AL KAGR E ++ V K ++ V Y +ID F K
Sbjct: 556 EMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI--VRKGVALTKV-YYTTLIDGFSKA 612
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
D A + M D P+ T++ L+ CK +++ +L + G K F +
Sbjct: 613 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 672
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+ID + R + + A +EM G P+ TY + I S C G + + L KM+
Sbjct: 673 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMER 732
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK------ 442
+ ++PD+ T+N LI M I++A M+ P+ ++Y L+K L+K
Sbjct: 733 EGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYV 792
Query: 443 -----SGRF-----DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
SG + D Q M ++G NP T + ++ + GR EEA ++
Sbjct: 793 RSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMC 852
Query: 493 ERGIS 497
+G+S
Sbjct: 853 GKGLS 857
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 185/441 (41%), Gaps = 1/441 (0%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
YN + + R + + R+ Q+ G P+ TY +I +C + R ++
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLL 210
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
E + P T +LV G R + KA L + + L+ L
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVR 270
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
EA + M G P F + ++ L + + + D + GV P TY ++
Sbjct: 271 EALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
K GR + + + K+ + +YN +I C + A E+
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFT 389
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
P +VTF LI+G+C + + ++ K D F +I+ L + R ++A +
Sbjct: 390 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 449
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
L+E+ G+ PN ITY +I C G V +L + + M+ D P+ +T+N+L+ +
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
K+ KA M G+ P+ +Y+ L++ FD A + F MEQNG PD +
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 569
Query: 468 SNLILETLVQQGRFEEAHDIV 488
++ + L + GR EEA+ +
Sbjct: 570 YAVLTDALCKAGRAEEAYSFI 590
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 123/248 (49%), Gaps = 1/248 (0%)
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
RL + YN + + +M + + ++ + P+ VT+NT+I +CK+ ++
Sbjct: 143 RLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTA 202
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+LLE G +P+ FT N+++ CR A M G N +Y ILI+
Sbjct: 203 HRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQG 262
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
LC V +L LF M+ D SP++ F LI C+ ++ A F +M G+ P
Sbjct: 263 LCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPS 322
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y+A+I K GR ++A + ME+NGC+PD +T N ++ L Q + EEA +++
Sbjct: 323 VMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLN 381
Query: 490 TSKERGIS 497
+ + G +
Sbjct: 382 NAVKEGFT 389
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 11/131 (8%)
Query: 363 YNILIRSLCAIGDVARSLRL-FQKMQADR--------ISPDIYTFNALIQSFCRMNKIEK 413
Y L+ S+ D A +R+ +QA R +SP Y F ++S R + E
Sbjct: 109 YERLVVSMLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFA--LRSLARFDMTEY 166
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
+ + ++ GL PD +Y+ +IK+ K G A + F + + G P+++T N ++
Sbjct: 167 MGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVL 226
Query: 474 TLVQQGRFEEA 484
+ G +A
Sbjct: 227 GYCRTGELRKA 237
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 123/448 (27%), Positives = 212/448 (47%), Gaps = 1/448 (0%)
Query: 51 LIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
++ IG + EA+ +V +M+ G +ID V +V + M +R
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRA 223
Query: 111 VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA 170
V P+ + + +V G R L +ER C ++ S + A
Sbjct: 224 VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
+K G P F + L + + +L+ +++G KP T+ L++ L
Sbjct: 284 WYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGL 343
Query: 231 YKAGRDVEGDR-YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
K G + R +L V D NV +Y +I+ +CK ++RA + M+++ + PN
Sbjct: 344 CKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPN 403
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
T+ LI GHCK + EL+ ++ + GF P+ FT+N++ID LC+ RF +A L
Sbjct: 404 TNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLR 463
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
++ G+ + +TY ILI C D ++L +F +M + PD++T+N LI +FCR
Sbjct: 464 RGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQK 523
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
K+E++EK F + LGL P +Y+++I + G A + F M GC PDS T
Sbjct: 524 KVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYG 583
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGIS 497
++ L + + +EA + +T + G+S
Sbjct: 584 ALISGLCNESKLDEACQLYETMIDNGLS 611
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 138/517 (26%), Positives = 218/517 (42%), Gaps = 63/517 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ R+ N VID + +D A F +M PD +Y +++ G CR+G + +
Sbjct: 188 GLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDV 247
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R +K M GYA + T T++I F V F + + + PN SL++G
Sbjct: 248 DRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLING 307
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AFE+L +M +G+ P
Sbjct: 308 LCKIGSIKQAFEML-----------------------------------EEMVRKGWKPN 332
Query: 185 SSTFDYTVTCLVTGL-DLNETCGILDTFIK----RGVKPRFSTYLLLMEALYKAGRDVEG 239
YT T L+ GL T F+K KP TY ++ K +
Sbjct: 333 V----YTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRA 388
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ L + + LV N N+Y +ID CK RA E+ M PN+ T+N +I G
Sbjct: 389 EMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDG 448
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK + +LL L+ G DK T+ +I CR + AL S M + G+ P+
Sbjct: 449 LCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPD 508
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
TYN+LI + C V S +LF++ + P T+ ++I +CR I A K F
Sbjct: 509 MHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFH 568
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP---------------- 463
M G +PD+ +Y ALI L + DEA Q + +M NG +P
Sbjct: 569 KMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQG 628
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVK---TSKERGIS 497
DS T+ +ILE L ++ + +++ + K+ G++
Sbjct: 629 DSATAMIILERLEKKLWIRTVNTLIRKLCSEKKVGVA 665
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 205/437 (46%), Gaps = 14/437 (3%)
Query: 16 VIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLG 75
+I + ++ A+ F++ P+ ++ LI+G+C+IG + +A ++++M G
Sbjct: 269 MISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKG 328
Query: 76 YAPNVYTYTILIDGFCNAKRVAEVFRV-LEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
+ PNVYT+T LIDG C + FR+ L++++ N PN T +++G + ++A
Sbjct: 329 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRA 388
Query: 135 FELLIRFMEREPLTQKLVCNTLLYR--LSNNSMASE---AAAILRKMGDRGYLPESSTFD 189
LLIR E Q LV NT Y + + A A ++ MG G+ P T++
Sbjct: 389 EMLLIRMKE-----QGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYN 443
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
+ L E +L +K G+ TY +L+ + + + + +FK
Sbjct: 444 AIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKV 503
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
L ++++YN++I FC+ ++ + ++ E + P T+ ++I G+C+D +
Sbjct: 504 GLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSA 563
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+ + + G KPD T+ ++I LC + ++A M++ G+ P +T L
Sbjct: 564 IKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYE 623
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
C GD A ++ + ++++ I T N LI+ C K+ A F +L L D
Sbjct: 624 YCKQGDSATAMIILERLEKKLW---IRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVD 680
Query: 430 NFSYSALIKALIKSGRF 446
+ +A A +S +F
Sbjct: 681 RITLAAFTTACYESNKF 697
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 122/321 (38%), Gaps = 38/321 (11%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y +I+ K ++ A + +M P+ TY LI G C+ G A L
Sbjct: 367 PNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYEL 426
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ M G+ PN++TY +IDG C R E +++L + + ++ T L+ R
Sbjct: 427 MDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCR 486
Query: 128 CLDPHKAFELLIRFM-------------------------EREPLTQKLVCNTLL-YRLS 161
D +A + R E E L ++ V LL + +
Sbjct: 487 QTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKET 546
Query: 162 NNSM---------ASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
SM S A KM D G P+S T+ ++ L L+E C + +T I
Sbjct: 547 YTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMI 606
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
G+ P T + L K G L + K + VN+ +I C +
Sbjct: 607 DNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWIRTVNT---LIRKLCSEKKVG 663
Query: 273 RATEICREMRDRDIAPNLVTF 293
A ++ D+D+ + +T
Sbjct: 664 VAALFFHKLLDKDLNVDRITL 684
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ Y ++I + I A F +M CKPD TY LI G+C +DE
Sbjct: 538 LGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDE 597
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER 109
A +L + M G +P T L +C A +LE ++++
Sbjct: 598 ACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKK 643
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/500 (27%), Positives = 232/500 (46%), Gaps = 10/500 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P T YN +I + K + A+ F+ + +P+ FT N L+ G CR G + +A
Sbjct: 63 GLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKA 122
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L M +G N Y+YTILI G C+AK V + + +MK PN L+ G
Sbjct: 123 CWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISG 182
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A L + + + N ++ S ++A I M G P+
Sbjct: 183 LCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 242
Query: 185 SSTFDYTVTCLVTGL---DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
D+T L+ GL E +L+ +K G P T+ L+ A + + R
Sbjct: 243 ----DWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALR 298
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
N + + ++ + +I+ K + + A E+ E+ + PN++T+ ++I G+C
Sbjct: 299 MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYC 358
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K +V E+L M+ G +P+ +T+NS++ L + + A+ L++M + G+ PN I
Sbjct: 359 KSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 418
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY L++ C D + RLF+ M+ + + PD + + L + C K +AE+A+ +
Sbjct: 419 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC---KAGRAEEAYSFI 475
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ G+ Y+ LI K+G D A M GC PDSYT +++L L +Q R
Sbjct: 476 VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRL 535
Query: 482 EEAHDIVKTSKERGISFKSF 501
EA I+ RGI F
Sbjct: 536 NEALPILDQMSLRGIKCTIF 555
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 235/529 (44%), Gaps = 41/529 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P T NA++ ++ + A F M + C+ + ++Y ILI G+C V +A
Sbjct: 98 GLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKA 157
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L M+ G +PNV +T LI G C + RV + + + M + V P+ T +++ G
Sbjct: 158 LVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVG 217
Query: 125 VFRCLDPHKAFELLIRFMEREPL-TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + A ++ ME+ NTL+Y L + EA +L G+ P
Sbjct: 218 YSKLGRMNDALKI-KELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTP 275
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
TF + ++ + + + K + L+ +L K R E L
Sbjct: 276 TVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELL 335
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + + LV NV +Y +ID +CK +D A E+ + M PN T+N+L+ G KD
Sbjct: 336 NEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKD 395
Query: 304 AEVHKTRELLV-----------------------------------MLLECGFKPDKFTF 328
++HK LL M+ + G KPD+ +
Sbjct: 396 KKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAY 455
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+ D LC+A R E+A S +V GV + Y LI G+ + L ++M
Sbjct: 456 AVLTDALCKAGRAEEAY---SFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMID 512
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ +PD YT++ L+ + C+ ++ +A M G++ F+Y+ LI +++ G+ D
Sbjct: 513 EGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDH 572
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
AK+ + M +G P + T + + + ++GR E+A D++ + G++
Sbjct: 573 AKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVA 621
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/522 (25%), Positives = 223/522 (42%), Gaps = 54/522 (10%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS G+ P+ Y ++ID KS +D+A + M D C+P+ +TYN L++G+ +
Sbjct: 338 ISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKK 397
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ +A+ L+ +M+ G PNV TYT L+ G C+ FR+ E+M++ + P+E
Sbjct: 398 LHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAV 457
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L + + +A+ ++R + K+ TL+ S AA ++ +M D G
Sbjct: 458 LTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG 514
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+S T+ + L LNE ILD RG+K Y +L++ + + G+
Sbjct: 515 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 574
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI--- 297
R N + + +Y + I+ +CK ++ A ++ +M +AP++VT+N LI
Sbjct: 575 RMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGC 634
Query: 298 ------------------------------------------------SGHCKDAEVHKT 309
SG E+ T
Sbjct: 635 GHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDIT 694
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+LL +++ G P T++S+I C+A R E+A L M G+ PN Y +LI+
Sbjct: 695 WQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKC 754
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
C ++L M P + ++ L+ C EK + F +L LG D
Sbjct: 755 CCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHD 814
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
++ L L+K+G D Q ME+ C S T L+
Sbjct: 815 EVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALV 856
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 142/545 (26%), Positives = 233/545 (42%), Gaps = 57/545 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS YNA+I K ++ A + M + C PD +TYN LI+G+C +EA
Sbjct: 203 GVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEA 261
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAK------------------------------ 94
L+ G+ P V T+T LI+G+C A+
Sbjct: 262 EELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINS 321
Query: 95 -----RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT- 148
R+ E +L + + PN T S++ G + A E+L + MER+
Sbjct: 322 LIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL-KMMERDGCQP 380
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
N+L+Y L + +A A+L KM G +P T+ + D + +
Sbjct: 381 NAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF 440
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ + G+KP Y +L +AL KAGR E ++ V K ++ V Y +ID F K
Sbjct: 441 EMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI--VRKGVALTKV-YYTTLIDGFSKA 497
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
D A + M D P+ T++ L+ CK +++ +L + G K F +
Sbjct: 498 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 557
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+ID + R + + A +EM G P+ TY + I S C G + + L KM+
Sbjct: 558 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMER 617
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK------ 442
+ ++PD+ T+N LI M I++A M+ P+ ++Y L+K L+K
Sbjct: 618 EGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYV 677
Query: 443 -----SGRF-----DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
SG + D Q M ++G NP T + ++ + GR EEA ++
Sbjct: 678 RSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMC 737
Query: 493 ERGIS 497
+G+S
Sbjct: 738 GKGLS 742
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 190/445 (42%), Gaps = 9/445 (2%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
YN + + R + + R+ Q+ G P+ TY +I +C + R ++
Sbjct: 36 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 95
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
E + P T +LV G R + KA L + + L+ L +
Sbjct: 96 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 155
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
+A + M G P F + ++ L + + + D + GV P TY ++
Sbjct: 156 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 215
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI- 286
K GR + + + K+ + +YN +I C D+ TE E+ + +
Sbjct: 216 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-----DQKTEEAEELLNNAVK 270
Query: 287 ---APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
P +VTF LI+G+C + + ++ K D F +I+ L + R ++
Sbjct: 271 EGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKE 330
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A + L+E+ G+ PN ITY +I C G V +L + + M+ D P+ +T+N+L+
Sbjct: 331 AKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMY 390
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ K+ KA M G+ P+ +Y+ L++ FD A + F MEQNG P
Sbjct: 391 GLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKP 450
Query: 464 DSYTSNLILETLVQQGRFEEAHDIV 488
D + ++ + L + GR EEA+ +
Sbjct: 451 DEHAYAVLTDALCKAGRAEEAYSFI 475
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 124/248 (50%), Gaps = 1/248 (0%)
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
RL + YN + + +M + + ++ + P+ VT+NT+I +CK+ ++
Sbjct: 28 RLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTA 87
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+LLE G +P+ FT N+++ CR A M G N +Y ILI+
Sbjct: 88 HRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQG 147
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
LC V ++L LF M+ D SP++ F LI C+ ++ A F +M G+ P
Sbjct: 148 LCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPS 207
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y+A+I K GR ++A + ME+NGC+PD +T N ++ L Q + EEA +++
Sbjct: 208 VMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLN 266
Query: 490 TSKERGIS 497
+ + G +
Sbjct: 267 NAVKEGFT 274
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 211/469 (44%), Gaps = 38/469 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ + Y +I+ L K+ LA +K + CK D FTY ++I +C+ G+ EA
Sbjct: 1046 GLLGDAKTYGILINGLCKARKTGLA-IKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEA 1104
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + +M G G P+V Y+ L+DG C R+ E + M+ R + + T SL+HG
Sbjct: 1105 LDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHG 1164
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
LS + E L M DRG+ P+
Sbjct: 1165 -----------------------------------LSRAGLWKEVTWFLNLMVDRGFSPD 1189
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ TF + L + E IL+ +G +P TY LM L G+ +E L
Sbjct: 1190 AFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQ-LEDATKLF 1248
Query: 245 HVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
DR + NV SYN++I+ +CK +D A EMR + + P+ VT+NTLI C+
Sbjct: 1249 ESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQS 1308
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V ++L V + CG T+ ++D LC+ E+A+D + + PN +
Sbjct: 1309 GRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVF 1368
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+IL+ +C G + + + F ++ + + PD +N LI C + +A K + M
Sbjct: 1369 SILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEE 1428
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
G PD+ +++ +I+ L+K EA Q M +PD ++++L
Sbjct: 1429 KGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 217/493 (44%), Gaps = 36/493 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P ++ + N I A F +M+ D TY ILI+G+C+ A
Sbjct: 1011 GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLA 1070
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L ++M+G +V+TY ++ID C E + M + P+ SL+ G
Sbjct: 1071 IKLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 1129
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
L RF EA ++M RG +
Sbjct: 1130 -------------LCRF----------------------GRLKEALEFFKEMEGRGISAD 1154
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L E L+ + RG P T+ +L++ L K G+ E + L
Sbjct: 1155 VYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILE 1214
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ +YN +++ C V ++ AT++ + DR I N+ ++N LI+G+CKD
Sbjct: 1215 LMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQ 1274
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + + G KP T+N++I LC++ R A EM G TY
Sbjct: 1275 KIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYC 1334
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+L+ LC G + ++ LFQ ++ P+I F+ L+ CR K+E+A K F +
Sbjct: 1335 VLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKN 1394
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL PD +Y+ LI L G EA + ME+ GC PDS T N+I++ L+++ EA
Sbjct: 1395 GLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEA 1454
Query: 485 HDIVKTSKERGIS 497
+++ + R S
Sbjct: 1455 IQLLEEMRNRNFS 1467
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 183/419 (43%), Gaps = 38/419 (9%)
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
+I + ++ P E VR F + + A +L R + EP+ N LL ++
Sbjct: 902 KIGTKASLSPFERYVRDQCR--FGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKL 959
Query: 164 SMASEAAAILRKMGDRGYLPESSTFD-------------------------------YTV 192
S + RK+ D G P+ T + TV
Sbjct: 960 GYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTV 1019
Query: 193 TCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
T LV G+ + + + D K+G+ TY +L+ L KA R L+ K
Sbjct: 1020 TTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKA-RKTGLAIKLHEKMK 1078
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+V +Y M+ID CK M A ++ EM I P++V +++L+ G C+ + +
Sbjct: 1079 GNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKE 1138
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
E + G D +T+NS+I L RA +++ L+ MV+ G P+ T+ ILI
Sbjct: 1139 ALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILID 1198
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
LC G V + ++ + M+ PDI T+N L+ C + ++E A K F S+ G++
Sbjct: 1199 GLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKL 1258
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+ FSY+ LI K + DEA + F M G P + T N ++ L Q GR A +
Sbjct: 1259 NVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKL 1317
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 166/354 (46%), Gaps = 4/354 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQC-KPDRFTYNILIHGICRIGVVDE 63
GIS YN++I L ++ + F + VD+ PD FT+ ILI G+C+ G V E
Sbjct: 1150 GISADVYTYNSLIHGLSRAG-LWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGE 1208
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++++ M G P++ TY L++G C ++ + ++ E + +R + N + L++
Sbjct: 1209 AQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILIN 1268
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + +AF + + NTL+ L + A + +M G
Sbjct: 1269 GYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFL 1328
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ST+ + L L E + + K KP + +L++ + +AG+ E +
Sbjct: 1329 KLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQF 1388
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K+ L + +YN++I+ C M+ A ++ +M ++ P+ +TFN +I K+
Sbjct: 1389 DEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKE 1448
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR-AHRFEDALDCLSEMVEWGV 356
E+H+ +LL + F PD+ SM+ CL ++ AL L ++ GV
Sbjct: 1449 NEIHEAIQLLEEMRNRNFSPDE-AVTSMLLCLASFDPQWHAALVSLPNALQKGV 1501
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 117/247 (47%), Gaps = 1/247 (0%)
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
+++N ++ K+ + R++ D I P+L T N LI C V +
Sbjct: 946 TDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFG 1005
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
L+ GF+PD T +++ + + DA+ EM + G+ + TY ILI LC
Sbjct: 1006 GFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKAR 1065
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
+++L +KM+ + D++T+ +I + C+ +A F M+ G+ PD YS
Sbjct: 1066 KTGLAIKLHEKMKGN-CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYS 1124
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
+L+ L + GR EA + F ME G + D YT N ++ L + G ++E + +R
Sbjct: 1125 SLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDR 1184
Query: 495 GISFKSF 501
G S +F
Sbjct: 1185 GFSPDAF 1191
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS G+ P T YN +I+ L + A QM C PD T+N++I + +
Sbjct: 1391 ISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENE 1450
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILI 87
+ EA++L+++M ++P+ ++L+
Sbjct: 1451 IHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/500 (27%), Positives = 232/500 (46%), Gaps = 10/500 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P T YN +I + K + A+ F+ + +P+ FT N L+ G CR G + +A
Sbjct: 178 GLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKA 237
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L M +G N Y+YTILI G C+AK V + + +MK PN L+ G
Sbjct: 238 CWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISG 297
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A L + + + N ++ S ++A I M G P+
Sbjct: 298 LCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 357
Query: 185 SSTFDYTVTCLVTGL---DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
D+T L+ GL E +L+ +K G P T+ L+ A + + R
Sbjct: 358 ----DWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALR 413
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
N + + ++ + +I+ K + + A E+ E+ + PN++T+ ++I G+C
Sbjct: 414 MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYC 473
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K +V E+L M+ G +P+ +T+NS++ L + + A+ L++M + G+ PN I
Sbjct: 474 KSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 533
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY L++ C D + RLF+ M+ + + PD + + L + C K +AE+A+ +
Sbjct: 534 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC---KAGRAEEAYSFI 590
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ G+ Y+ LI K+G D A M GC PDSYT +++L L +Q R
Sbjct: 591 VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRL 650
Query: 482 EEAHDIVKTSKERGISFKSF 501
EA I+ RGI F
Sbjct: 651 NEALPILDQMSLRGIKCTIF 670
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 235/529 (44%), Gaps = 41/529 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P T NA++ ++ + A F M + C+ + ++Y ILI G+C V +A
Sbjct: 213 GLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKA 272
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L M+ G +PNV +T LI G C + RV + + + M + V P+ T +++ G
Sbjct: 273 LVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVG 332
Query: 125 VFRCLDPHKAFELLIRFMEREPL-TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + A ++ ME+ NTL+Y L + EA +L G+ P
Sbjct: 333 YSKLGRMNDALKI-KELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTP 390
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
TF + ++ + + + K + L+ +L K R E L
Sbjct: 391 TVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELL 450
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + + LV NV +Y +ID +CK +D A E+ + M PN T+N+L+ G KD
Sbjct: 451 NEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKD 510
Query: 304 AEVHKTRELLV-----------------------------------MLLECGFKPDKFTF 328
++HK LL M+ + G KPD+ +
Sbjct: 511 KKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAY 570
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+ D LC+A R E+A S +V GV + Y LI G+ + L ++M
Sbjct: 571 AVLTDALCKAGRAEEAY---SFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMID 627
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ +PD YT++ L+ + C+ ++ +A M G++ F+Y+ LI +++ G+ D
Sbjct: 628 EGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDH 687
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
AK+ + M +G P + T + + + ++GR E+A D++ + G++
Sbjct: 688 AKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVA 736
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/522 (25%), Positives = 223/522 (42%), Gaps = 54/522 (10%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS G+ P+ Y ++ID KS +D+A + M D C+P+ +TYN L++G+ +
Sbjct: 453 ISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKK 512
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ +A+ L+ +M+ G PNV TYT L+ G C+ FR+ E+M++ + P+E
Sbjct: 513 LHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAV 572
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L + + +A+ ++R + K+ TL+ S AA ++ +M D G
Sbjct: 573 LTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG 629
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+S T+ + L LNE ILD RG+K Y +L++ + + G+
Sbjct: 630 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 689
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI--- 297
R N + + +Y + I+ +CK ++ A ++ +M +AP++VT+N LI
Sbjct: 690 RMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGC 749
Query: 298 ------------------------------------------------SGHCKDAEVHKT 309
SG E+ T
Sbjct: 750 GHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDIT 809
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+LL +++ G P T++S+I C+A R E+A L M G+ PN Y +LI+
Sbjct: 810 WQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKC 869
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
C ++L M P + ++ L+ C EK + F +L LG D
Sbjct: 870 CCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHD 929
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
++ L L+K+G D Q ME+ C S T L+
Sbjct: 930 EVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALV 971
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 143/545 (26%), Positives = 235/545 (43%), Gaps = 57/545 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS YNA+I K ++ A + M + C PD +TYN LI+G+C +EA
Sbjct: 318 GVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEA 376
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE-------------------- 104
L+ G+ P V T+T LI+G+C A++ + R+
Sbjct: 377 EELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINS 436
Query: 105 -IMKER--------------NVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT- 148
I K+R + PN T S++ G + A E+L + MER+
Sbjct: 437 LIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL-KMMERDGCQP 495
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
N+L+Y L + +A A+L KM G +P T+ + D + +
Sbjct: 496 NAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF 555
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ + G+KP Y +L +AL KAGR E ++ V K ++ V Y +ID F K
Sbjct: 556 EMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI--VRKGVALTKV-YYTTLIDGFSKA 612
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
D A + M D P+ T++ L+ CK +++ +L + G K F +
Sbjct: 613 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 672
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+ID + R + + A +EM G P+ TY + I S C G + + L KM+
Sbjct: 673 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMER 732
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK------ 442
+ ++PD+ T+N LI M I++A M+ P+ ++Y L+K L+K
Sbjct: 733 EGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYV 792
Query: 443 -----SGRF-----DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
SG + D Q M ++G NP T + ++ + GR EEA ++
Sbjct: 793 RSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMC 852
Query: 493 ERGIS 497
+G+S
Sbjct: 853 GKGLS 857
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 186/441 (42%), Gaps = 1/441 (0%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
YN + + R + + R+ Q+ G P+ TY +I +C + R ++
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 210
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
E + P T +LV G R + KA L + + L+ L +
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 270
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
+A + M G P F + ++ L + + + D + GV P TY ++
Sbjct: 271 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
K GR + + + K+ + +YN +I C + A E+
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFT 389
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
P +VTF LI+G+C + + ++ K D F +I+ L + R ++A +
Sbjct: 390 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 449
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
L+E+ G+ PN ITY +I C G V +L + + M+ D P+ +T+N+L+ +
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
K+ KA M G+ P+ +Y+ L++ FD A + F MEQNG PD +
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 569
Query: 468 SNLILETLVQQGRFEEAHDIV 488
++ + L + GR EEA+ +
Sbjct: 570 YAVLTDALCKAGRAEEAYSFI 590
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 124/248 (50%), Gaps = 1/248 (0%)
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
RL + YN + + +M + + ++ + P+ VT+NT+I +CK+ ++
Sbjct: 143 RLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTA 202
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+LLE G +P+ FT N+++ CR A M G N +Y ILI+
Sbjct: 203 HRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQG 262
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
LC V ++L LF M+ D SP++ F LI C+ ++ A F +M G+ P
Sbjct: 263 LCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPS 322
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y+A+I K GR ++A + ME+NGC+PD +T N ++ L Q + EEA +++
Sbjct: 323 VMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLN 381
Query: 490 TSKERGIS 497
+ + G +
Sbjct: 382 NAVKEGFT 389
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 11/131 (8%)
Query: 363 YNILIRSLCAIGDVARSLRL-FQKMQADR--------ISPDIYTFNALIQSFCRMNKIEK 413
Y L+ S+ D A +R+ +QA R +SP Y F ++S R + E
Sbjct: 109 YERLVVSMLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFA--LRSLARFDMTEY 166
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
+ + ++ GL PD +Y+ +IK+ K G A + F + + G P+++T N ++
Sbjct: 167 MGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVL 226
Query: 474 TLVQQGRFEEA 484
+ G +A
Sbjct: 227 GYCRTGELRKA 237
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/490 (26%), Positives = 233/490 (47%), Gaps = 4/490 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKPDRFTYNILIHGICRIG 59
+S G SPS + N +++AL +DLA F +M + PD +TY ++I +CR G
Sbjct: 171 LSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAG 230
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+D A ++ ++E G P V TY +L+D C + RV E F++ M E + P+ T
Sbjct: 231 EIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFG 290
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
L++G+ R + +++ ME +T +++ N L+ SEA + +M
Sbjct: 291 ILINGLARG-QRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVS 349
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY-LLLMEALYKAGRDV 237
+G T++ L ++ ILD + G+ S + ++ L GR
Sbjct: 350 KGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLD 409
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
R + + L N I CK + A EI + + + N+ T N LI
Sbjct: 410 VVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALI 469
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G C+ + + ++L +++ G + D+ T+N MI C+A + E+A+ +M++ G
Sbjct: 470 HGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFK 529
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P+ T+N +R+ C +G V L L +M+++ + PDI T+ +I +C+ + KA K
Sbjct: 530 PDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKY 589
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
++ GLRP+ Y+ALI ++G +A +M+ NG P T N ++ +
Sbjct: 590 LIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCH 649
Query: 478 QGRFEEAHDI 487
G EEA +I
Sbjct: 650 AGLVEEAKEI 659
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/530 (25%), Positives = 224/530 (42%), Gaps = 40/530 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
++P Y +I AL ++ ID A++ ++ +P TYN+L+ +CR G V+EA
Sbjct: 211 AVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEA 270
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L +M P++ T+ ILI+G +R EV VL+ M+ + PNE L+
Sbjct: 271 FQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIG- 329
Query: 125 VFRCLDPHKAFEL-LIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYL 182
+ C + H + L L M + + Q +V L+ + L A IL +M G
Sbjct: 330 -WHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMT 388
Query: 183 PESSTFDYTVTCLVTGLD-LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
S F+ V + G L+ ++ + R +KP + ++ L K G+ E
Sbjct: 389 VHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAE 448
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD------------------ 283
V L N+ + N +I C+ N M AT++ + M D
Sbjct: 449 IWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCC 508
Query: 284 -----------------RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
R P+L TFNT + +C +V LL + G KPD
Sbjct: 509 KASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIV 568
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+ ++ID C+A A L E+++ G+ PN + YN LI G ++ ++ + M
Sbjct: 569 TYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTM 628
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ + I P T+N+L+ C +E+A++ F + + Y+ +I+ K G+
Sbjct: 629 KHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKI 688
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
DEA F M P+ T ++ + G EEA + GI
Sbjct: 689 DEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGI 738
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 223/504 (44%), Gaps = 36/504 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ YN ++DAL +S ++ A+ +M + +P T+ ILI+G+ R E
Sbjct: 246 GIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEV 305
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++++MEG G PN Y LI C +E R+ + M + + T +
Sbjct: 306 DAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKA 365
Query: 125 VFRCLDPHKAFELL----------------------IRFMEREPLTQKL----------- 151
+ + + A ++L +R R + +L
Sbjct: 366 LCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKP 425
Query: 152 ---VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
V + L EAA I + +G +T + + L G ++ E +L
Sbjct: 426 NDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVL 485
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ GV+ TY ++++ KA + E + + + K ++ ++N + +C +
Sbjct: 486 KAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNL 545
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
++ + +M+ + P++VT+ T+I G+CK +VHK + L+ L++ G +P+ +
Sbjct: 546 GKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIY 605
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N++I R DA+ L M G+ P ITYN L+ +C G V + +F +
Sbjct: 606 NALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCIL 665
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
I + + +IQ FC++ KI++A F M +RP+ +Y+ L+ A K G +E
Sbjct: 666 KNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEE 725
Query: 449 AKQTFLSMEQNGCNPDSYTSNLIL 472
A + F M +G PD+ + N ++
Sbjct: 726 AFKLFDEMVSSGIVPDTVSYNTLI 749
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 153/348 (43%), Gaps = 37/348 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG++ +T NA+I L + N++ A + M + DR TYNI+I C+ ++E
Sbjct: 458 LGVNIATS--NALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEE 515
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A++L M G+ P+++T+ + +CN +V ++ +L+ MK + P+ T +++
Sbjct: 516 AIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIID 575
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + D HKA + LI ++ ++ N L+ N S+A
Sbjct: 576 GYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDA-------------- 621
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
G+LDT G++P TY LM + AG E
Sbjct: 622 ---------------------IGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIF 660
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ V Y ++I FCK+ +D A +EM RDI PN +T+ TL+ +CK
Sbjct: 661 AQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKC 720
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
+ +L ++ G PD ++N++I C + ++ +EM
Sbjct: 721 GNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEM 768
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 147/330 (44%), Gaps = 40/330 (12%)
Query: 209 DTFIK---RGVKPRFSTYLLLMEALYKAGR-DVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
D F++ RG P T +L+EAL G+ D+ + + + +V +Y ++I
Sbjct: 166 DAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKA 225
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
C+ +D A + E+ I P +VT+N L+ C+ V + +L ++E +P
Sbjct: 226 LCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPS 285
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
TF +I+ L R RF + L EM +G+ PN + YN LI C G + +LRLF
Sbjct: 286 IVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFD 345
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG------------------- 425
+M + I + T+N + ++ C+ ++E AE+ ML G
Sbjct: 346 EMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGT 405
Query: 426 -----------------LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
L+P++ +A I+ L K G+ +EA + + + G + TS
Sbjct: 406 GRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATS 465
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGISF 498
N ++ L Q +EA ++K + G+ F
Sbjct: 466 NALIHGLCQGNNMKEATKVLKAMVDSGVEF 495
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 81/155 (52%), Gaps = 1/155 (0%)
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ-ADRISPDIYTFNALI 402
A D E+ G P+ T NIL+ +L G + + ++F +M+ + ++PD+YT+ +I
Sbjct: 164 AADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMI 223
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
++ CR +I+ A + G++P +Y+ L+ AL +SGR +EA Q M +
Sbjct: 224 KALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLR 283
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
P T +++ L + RF E +++ + GI+
Sbjct: 284 PSIVTFGILINGLARGQRFGEVDAVLQEMEGFGIT 318
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 236/493 (47%), Gaps = 1/493 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS YN ++ L + +D A KF++M D P+ TYNI+I +C+ G ++ A
Sbjct: 370 GCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETA 428
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + M+ G PNV T I++D C A+R+ + + E + + P+ T SL+ G
Sbjct: 429 LVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEG 488
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R +A++L + ++ + +V +L+ + I +M G P+
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPD 548
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + C+ ++ + + G P +Y +L+ L KAG E
Sbjct: 549 LLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFY 608
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + V + +YN VID FCK +++A ++ EM+ + P +VT+ ++I G K
Sbjct: 609 TMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKID 668
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L G + + ++S+ID + R ++A + E+++ G+ PN T+N
Sbjct: 669 RLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 728
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ +L +++ +L FQ M+ + +P+ T++ LI C++ K KA + M
Sbjct: 729 CLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQ 788
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G +P+ F+Y+ +I L K+G EA F ++ G DS N I+E L R +A
Sbjct: 789 GFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDA 848
Query: 485 HDIVKTSKERGIS 497
+ + + ++ +G S
Sbjct: 849 YRLFEEARLKGCS 861
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 211/481 (43%), Gaps = 5/481 (1%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P LYN ID K+ +D+A+ F +M + D TY +I +C+ ++EA+
Sbjct: 266 LEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAV 325
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L + M+ P Y Y +I G+ A + + + +LE + + P+ + ++ +
Sbjct: 326 ELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCL 385
Query: 126 FRCLDPHKAFELLIRF--MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
R + E L +F M+++ + N ++ L A + M D G P
Sbjct: 386 GR---KGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFP 442
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T + V L L++ C I + + +P TY L+E L + GR E +
Sbjct: 443 NVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLY 502
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + N Y +I F K + +I EM +P+L+ NT + K
Sbjct: 503 EQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKA 562
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E+ K R L + GF PD ++ +I L +A +A + M E G +T Y
Sbjct: 563 GEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAY 622
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N +I C G V ++ +L ++M+ P + T+ ++I +++++++A F +
Sbjct: 623 NTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 682
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ + YS+LI K GR DEA + Q G P+ YT N +L+ LV+ E
Sbjct: 683 KGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742
Query: 484 A 484
A
Sbjct: 743 A 743
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/495 (23%), Positives = 218/495 (44%), Gaps = 1/495 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G PS ++ + +KS + A+ Q M + +P Y LI +
Sbjct: 156 MSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRD 215
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
D L L +QM+ LGYA NV+ +T LI F RV +L+ MK ++ P+
Sbjct: 216 SDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNV 275
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + A++ + + +++ L +EA + M
Sbjct: 276 CIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNK 335
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P + ++ + + +L+ ++G P +Y ++ L + G+ E
Sbjct: 336 QVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEAL 395
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + KD + N+++YN++ID CK ++ A + M+D + PN++T N ++
Sbjct: 396 KKFEEMKKDA-IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRL 454
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK + + L +PD T+ S+I+ L R R ++A +M++ PN
Sbjct: 455 CKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNA 514
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ Y LIR+ G +++ +M SPD+ N + + +IEK F
Sbjct: 515 VVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQE 574
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+ LG PD SY+ LI L+K+G EA + F +M++ GC D+ N +++ + G+
Sbjct: 575 IKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGK 634
Query: 481 FEEAHDIVKTSKERG 495
+A+ +++ K +G
Sbjct: 635 VNKAYQLLEEMKTKG 649
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/445 (25%), Positives = 189/445 (42%), Gaps = 35/445 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ N ++D L K+ +D A F+ + C+PD TY LI G+ R G VDEA
Sbjct: 439 GLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEA 498
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE-------------------------- 98
+L +QM PN YT LI F R +
Sbjct: 499 YKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDC 558
Query: 99 VFRVLEIMKERNV---------CPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
VF+ EI K R + P+ + L+HG+ + H+A+EL E+ +
Sbjct: 559 VFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLD 618
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
NT++ + ++A +L +M +G+ P T+ + L L+E + +
Sbjct: 619 TRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFE 678
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+G++ Y L++ K GR E + + + L NV ++N ++D K
Sbjct: 679 EAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAE 738
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+ A + M+D PN +T++ LI G CK + +K + + GFKP+ FT+
Sbjct: 739 EISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYT 798
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+MI L +A +A + E G ++ YN +I L + + RLF++ +
Sbjct: 799 TMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLK 858
Query: 390 RISPDIYTFNALIQSFCRMNKIEKA 414
S T L+ S + IE+A
Sbjct: 859 GCSIYTKTCVVLLDSLHKAECIEQA 883
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 182/421 (43%), Gaps = 46/421 (10%)
Query: 106 MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC----NTLLYRLS 161
+ E ++ PN LV GV R L R+ ER LT + C N+LL ++
Sbjct: 88 LAELDLNPNP----ELVIGVLRRLKDVNNAVNYFRWAER--LTDRAHCREAYNSLLMVMA 141
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
+ IL +M G+ P ++T V + L E + T K +P FS
Sbjct: 142 RTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFS 201
Query: 222 TYLLLMEAL-----------------------------------YKAGRDVEGDRYLNHV 246
Y L+ AL + GR L+ +
Sbjct: 202 AYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEM 261
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ L +V YN+ IDCF K +D A + EM+ + + VT+ ++I CK +
Sbjct: 262 KSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRL 321
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
++ EL + + P + +N+MI A +FEDA L G P+ ++YN +
Sbjct: 322 NEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCI 381
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ L G V +L+ F++M+ D I P++ T+N +I C+ K+E A +M GL
Sbjct: 382 LSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGL 440
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P+ + + ++ L K+ R D+A F ++ C PD+ T ++E L + GR +EA+
Sbjct: 441 FPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYK 500
Query: 487 I 487
+
Sbjct: 501 L 501
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 161/367 (43%), Gaps = 35/367 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG SP L N +D + K+ I+ FQ++ PD +Y ILIHG+ + G E
Sbjct: 543 LGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHE 602
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L M+ G + Y +IDGFC + +V + +++LE MK + P T S++
Sbjct: 603 AYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVID 662
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +A+ L E ++ + N ++Y ++++ G G +
Sbjct: 663 GLAKIDRLDEAYMLF-----EEAKSKGIELNVVIY-----------SSLIDGFGKVGRID 706
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
E+ I++ +++G+ P T+ L++AL KA E
Sbjct: 707 EAYL-------------------IMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCF 747
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + N +Y+++I CK+ ++A +EM+ + PN+ T+ T+ISG K
Sbjct: 748 QSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKA 807
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + L E G D +N++I+ L A+R DA E G T T
Sbjct: 808 GNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTC 867
Query: 364 NILIRSL 370
+L+ SL
Sbjct: 868 VVLLDSL 874
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 117/282 (41%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I LG P R Y +I LVK+ AY F M C D YN +I G C+ G
Sbjct: 575 IKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGK 634
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V++A +L+++M+ G+ P V TY +IDG R+ E + + E K + + N S
Sbjct: 635 VNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSS 694
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G + +A+ ++ M++ N LL L SEA + M D
Sbjct: 695 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLK 754
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P T+ + L N+ K+G KP TY ++ L KAG VE D
Sbjct: 755 CTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEAD 814
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
+ V++ YN +I+ N A + E R
Sbjct: 815 TLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEAR 856
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 111/239 (46%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+YN ++ + + +I EM P+ T ++ K ++ + + +
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
+ F+P + ++I L + + L +M E G N + LIR G V
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+L L +M+++ + PD+ +N I F + K++ A K F M GL D+ +Y+++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
I L K+ R +EA + F M+QN P +Y N ++ G+FE+A+ +++ + +G
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 63/170 (37%)
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
+NS++ + R +F L EM G P+ T ++ S + + Q M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ + P + LI + + F M LG + ++ LI+ + GR
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
D A M+ N PD N+ ++ + G+ + A K G+
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGL 301
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 228/481 (47%), Gaps = 37/481 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P +Y+ +++A + A + + C D N++++ IC G VDEA
Sbjct: 189 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEA 248
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L++ + G P+V +Y ++ G C AKR V ++E M PN T
Sbjct: 249 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTF------ 302
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
NTL+ L N + +L +M + G P+
Sbjct: 303 -----------------------------NTLISYLCRNGLFERVHEVLAQMVEHGCTPD 333
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + L IL+ G+KP Y L++ L A R E + L
Sbjct: 334 IRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 393
Query: 245 HVF-KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+F KD + +V ++N+++D FC+ ++DR E+ +M + P+++T+ T+I+G CK+
Sbjct: 394 EMFDKDCPLDDV-TFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKE 452
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + LL + CG KP+ ++ ++ LC A R+ DA D +S+M++ G P N IT+
Sbjct: 453 GLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 512
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI LC G V +++ L ++M + SPD+ +++ +I + K ++A + M+
Sbjct: 513 NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 572
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ P+ YS++ AL + GR ++ Q F +++ D+ N ++ +L ++G E
Sbjct: 573 KGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETER 632
Query: 484 A 484
A
Sbjct: 633 A 633
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 195/450 (43%), Gaps = 3/450 (0%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
YN ++ G CR G ++ A RL + PN YTY ++ C R+A+ VL+ M
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
R P ++ R A +L R CN +L + +
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
EA +LR + G P+ +++ + L +++ ++ P T+ L+
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
L + G L + + ++ Y +ID CK ++ A EI M +
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
PN+V +NTL+ G C +T ELL + + D TFN ++D C+ + ++
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
L +M+E G P+ ITY +I C G + ++ L + M A P+ ++ +++ C
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 486
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ AE M+ G + +++ LI L K G ++A + M NGC+PD +
Sbjct: 487 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 546
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ +++ L + G+ +EA +++ +G+S
Sbjct: 547 YSTVIDGLGKAGKTDEALELLNVMVNKGMS 576
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 80/170 (47%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N +I+ L K ++ A +QM V+ C PD +Y+ +I G+ + G DEAL L+ M
Sbjct: 512 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 571
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G +PN Y+ + R+ +V ++ + +++ + + +++ + + +
Sbjct: 572 NKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETE 631
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+A E L + + + L+ L++ EA +L ++ +G L
Sbjct: 632 RAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 681
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
++ + LIRSLCA G R+ + + A + +NA++ +CR ++E A +
Sbjct: 94 GSVRLSSLIRSLCAAG---RTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRLA 150
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+ + + P+ ++Y +++AL GR +A M + GC P ++ILE +
Sbjct: 151 AA---VPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRG 207
Query: 479 GRFEEAHDIVKTSKERGISF 498
G F A +++ RG +
Sbjct: 208 GGFRSAVRVLEDLHARGCAL 227
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 217/460 (47%), Gaps = 2/460 (0%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGY--APNVYTYTILIDGFCNAKRVAE 98
C PD F+YNIL+ +C G +A L++ M G +P+V Y +IDGF V +
Sbjct: 180 CVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNK 239
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
+ + M +R + P+ T S+VH + + KA L + + + L N L+Y
Sbjct: 240 ACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIY 299
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
S+ EA + ++M + LP+ + + L + E + DT +G P
Sbjct: 300 GYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNP 359
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
+Y +++ G V+ + + D + ++ ++N++I + M+D+A I
Sbjct: 360 DVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIF 419
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
EMRD + P++VT+ T+I+ C+ ++ E +++ G PDK+ ++ +I C
Sbjct: 420 NEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTH 479
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
A + +SE++ G+ + + + +I +LC +G V + +F + PD +
Sbjct: 480 GSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVY 539
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
N L+ +C + K+EKA + F +M++ G+ P+ Y L+ K GR DE F M Q
Sbjct: 540 NMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQ 599
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
G P + N+I++ L + GR A E GI+
Sbjct: 600 KGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAM 639
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 219/486 (45%), Gaps = 51/486 (10%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP YN VID K ++ A F++M PD TY+ ++H +C+ +D+A
Sbjct: 218 SPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEA 277
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++QM G P+ +TY LI G+ + + E RV + M+ +++ P+ +
Sbjct: 278 FLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVAL-------- 329
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
NTL+ L EA + M +G P+
Sbjct: 330 ---------------------------NTLMGSLCKYGKIKEARDVFDTMAMKGQNPD-- 360
Query: 187 TFDYTVT--------CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
F YT+ CLV DL D + G+ P T+ +L++A G +
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDL------FDLMLGDGIAPDIYTFNVLIKAYANCGMLDK 414
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
N + + +V +Y VI C++ MD A E +M D+ + P+ ++ LI
Sbjct: 415 AMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQ 474
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G C + K +EL+ ++ G + D F S+I+ LC+ R DA + V G+ P
Sbjct: 475 GFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHP 534
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ + YN+L+ C +G + ++LR+F M + I P++ + L+ +C++ +I++ F
Sbjct: 535 DAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLF 594
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
ML G++P Y+ +I L ++GR AK F M ++G + T +++L L +
Sbjct: 595 REMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKN 654
Query: 479 GRFEEA 484
F+EA
Sbjct: 655 RCFDEA 660
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 142/539 (26%), Positives = 238/539 (44%), Gaps = 43/539 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P Y++V+ AL K+ ++D A +QM PD +TYN LI+G G EA
Sbjct: 251 GIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEA 310
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+R+ K+M P+V L+ C ++ E V + M + P+ + +++G
Sbjct: 311 VRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNG 370
Query: 125 VFR--CL-DPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRG 180
CL D F+L++ + + + N L+ +N M +A I +M D G
Sbjct: 371 YATKGCLVDMTDLFDLMLG----DGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 426
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP----------RFSTYLLLMEA- 229
P T+ + L +++ + I +GV P F T+ L++A
Sbjct: 427 VKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAK 486
Query: 230 ------------------------LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
L K GR ++ + L + YNM++D +
Sbjct: 487 ELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGY 546
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C V M++A + M I PN+V + TL++G+CK + + L +L+ G KP
Sbjct: 547 CLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPST 606
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
+N +ID L A R A EM E G+ N TY+I++R L ++ LF++
Sbjct: 607 ILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKE 666
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
++A + DI T N +I + ++E+A+ F S+ GL P +YS +I L+K G
Sbjct: 667 LRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGL 726
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFPGL 504
+EA+ F SM+ GC PDS N ++ L+++ A + ER S + +
Sbjct: 727 VEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAM 785
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 175/404 (43%), Gaps = 6/404 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P +N +I A +D A + F +M KP TY +I +CRIG +D+A
Sbjct: 391 GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDA 450
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ QM G P+ Y Y LI GFC + + ++ + + + S+++
Sbjct: 451 MEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINN 510
Query: 125 V---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ R +D F+L + + P +V N L+ +A + M G
Sbjct: 511 LCKLGRVMDAQNIFDLTVN-VGLHP--DAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 567
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P + V ++E + +++G+KP Y ++++ L++AGR V
Sbjct: 568 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + + + N +Y++V+ K D A + +E+R ++ +++T NT+I+G
Sbjct: 628 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 687
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ V + ++L + G P T++ MI L + E+A D S M G P++
Sbjct: 688 QTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSR 747
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
N ++R L ++ R+ K+ S + T L+ F
Sbjct: 748 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLF 791
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 101/248 (40%), Gaps = 73/248 (29%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV---------------------------- 352
P +T+ ++DC RAHR E AL +++
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168
Query: 353 --------EWGVPPNTITYNILIRSLC--------------------------------- 371
E G P+ +YNIL++SLC
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228
Query: 372 ----AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
GDV ++ LF++M I PD+ T+++++ + C+ ++KAE M+ G+
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PDN++Y+ LI +G++ EA + F M + PD N ++ +L + G+ +EA D+
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348
Query: 488 VKTSKERG 495
T +G
Sbjct: 349 FDTMAMKG 356
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 102/248 (41%), Gaps = 10/248 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P +YN ++D ++ A F M +P+ Y L++G C+IG +DE
Sbjct: 530 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 589
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L L ++M G P+ Y I+IDG A R M E + N+ T ++
Sbjct: 590 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLR 649
Query: 124 GVF--RCLDPHKAFELLIRFMEREPLTQK---LVCNTLLYRLSNNSMASEAAAILRKMGD 178
G+F RC D E + F E + K + NT++ + EA + +
Sbjct: 650 GLFKNRCFD-----EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISR 704
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G +P + T+ +T L+ + E + + G +P ++ L K V
Sbjct: 705 SGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVR 764
Query: 239 GDRYLNHV 246
YL+ +
Sbjct: 765 AGAYLSKI 772
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSL--------CAIGD---VARSLRLFQKMQA 388
R E+A D L E+ G P N + +L C G VA R + Q
Sbjct: 46 RPEEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFNRAASRAQG 105
Query: 389 DRI-SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
R+ SP YT+ L+ R ++ E A F +L GLR D S L+K ++ R D
Sbjct: 106 PRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTD 165
Query: 448 EAKQTFLS-MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
EA L + GC PD ++ N++L++L QG+ +A D+++ E G
Sbjct: 166 EALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGG 214
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 97/239 (40%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ Y +++ K ID F++M KP YNI+I G+ G A
Sbjct: 566 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 625
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+M G A N TY+I++ G + E + + ++ NV + T+ +++ G
Sbjct: 626 KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 685
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F+ +A +L + + + ++ L + EA + M + G P+
Sbjct: 686 MFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPD 745
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
S ++ V L+ ++ L +R T +LL++ G E R+L
Sbjct: 746 SRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 219/484 (45%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N ++ + KS D A +M PD T+N+LI R G VD A+ LV M
Sbjct: 161 NIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMAN 220
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G P + T+ ++ G C +R + V M + +V P+ + L+ G R + +
Sbjct: 221 KGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEE 280
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A + +R + + L+ S AAA LR+M G +P+ + +
Sbjct: 281 AMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIG 340
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
++E + D + G P TY L+ L K R ++ + LN + + +
Sbjct: 341 GFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTP 400
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
++ ++ +I +C+ ++A ++ + + + P++V +N+LI G C+ ++ K EL
Sbjct: 401 DLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELW 460
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ P+ T++ +ID C + E+A L EMV G PN +TYN +I+ C
Sbjct: 461 DDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRS 520
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G+V + + QKM D I PD+ TFN LI + + + A F M ++PD +Y
Sbjct: 521 GNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTY 580
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ +I + G +EA + F M +G PD YT ++ V G +EA +
Sbjct: 581 NMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMH 640
Query: 494 RGIS 497
RG +
Sbjct: 641 RGFA 644
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 216/460 (46%), Gaps = 2/460 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P +N +IDA ++ +D A M+ KP T+N ++ G+C+ D+A
Sbjct: 188 VFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAK 247
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ + M+ AP+V ++ ILI GFC V E + + M++R V P+ + L+ G+
Sbjct: 248 EVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLI-GL 306
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLPE 184
F +R M+ L V T++ SEA + +M G LP+
Sbjct: 307 FSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPD 366
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L L + +L+ +RGV P T+ L+ + G + + +
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFD 426
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ RL +V +YN +ID C+ + +A E+ +M R+I PN VT++ LI HC+
Sbjct: 427 TLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKG 486
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V + L ++ G P+ T+NS+I CR+ + L +M++ + P+ IT+N
Sbjct: 487 QVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFN 546
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI ++ + +F M+ + + PD T+N +I F +E+A + F M
Sbjct: 547 TLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGAS 606
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
G+ PD ++Y +LI + +G EA Q M G PD
Sbjct: 607 GIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 202/428 (47%), Gaps = 4/428 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCK--PDRFTYNILIHGICRIGVVD 62
G+ P +N+V+ L K D A F+ M DQC PD ++NILI G CR+G V+
Sbjct: 222 GLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM--DQCSVAPDVRSFNILIGGFCRVGEVE 279
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA++ K+M+ G P+V +++ LI F ++ L MK + P+ ++
Sbjct: 280 EAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVI 339
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G R +A + + L + NTLL L +A +L +M +RG
Sbjct: 340 GGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVT 399
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ TF + + + + DT + + ++P Y L++ + + G + +
Sbjct: 400 PDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANEL 459
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + + N +Y+++ID C+ ++ A EM + PN++T+N++I G+C+
Sbjct: 460 WDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCR 519
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
V K ++ L +++ PD TFN++I + A + + M + V P+ +T
Sbjct: 520 SGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVT 579
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN++I G++ + R+F+KM A I PD YT+ +LI ++A + M+
Sbjct: 580 YNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMM 639
Query: 423 TLGLRPDN 430
G PD+
Sbjct: 640 HRGFAPDD 647
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 192/418 (45%)
Query: 78 PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFEL 137
P + +LI + +++ E F ++ + V + +L+ + R PH A E
Sbjct: 85 PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEA 144
Query: 138 LIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVT 197
+ + N +++ + +A ++ +M R P+ T + +
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFR 204
Query: 198 GLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNS 257
D++ ++D+ +G+KP T+ +++ L K R + + + + +V S
Sbjct: 205 AGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRS 264
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
+N++I FC+V ++ A + +EM+ R + P++V+F+ LI ++ L +
Sbjct: 265 FNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMK 324
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
G PD + +I CRA +AL EMV G P+ +TYN L+ LC +
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLL 384
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+ L +M+ ++PD+ TF LI +CR EKA + F ++L LRPD +Y++LI
Sbjct: 385 DAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLI 444
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ + G +A + + M P+ T ++++++ ++G+ EEA + +G
Sbjct: 445 DGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKG 502
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 130/247 (52%), Gaps = 2/247 (0%)
Query: 253 SNVNSY--NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
S VN+Y N+++ +CK D+A + EM R + P++VT N LI + +V
Sbjct: 153 SEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAI 212
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
L+ + G KP TFNS++ LC+ RF+ A + M + V P+ ++NILI
Sbjct: 213 ALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGF 272
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C +G+V +++ +++MQ ++PD+ +F+ LI F K++ A M LGL PD
Sbjct: 273 CRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDG 332
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
Y+ +I ++G EA + M GC PD T N +L L +Q R +A +++
Sbjct: 333 VIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNE 392
Query: 491 SKERGIS 497
KERG++
Sbjct: 393 MKERGVT 399
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 152/356 (42%), Gaps = 35/356 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P +Y VI ++ S+ A +M C PD TYN L++G+C+ + +
Sbjct: 326 LGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLD 385
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+ +M+ G P++ T+T LI G+C + ++ + + + + P+ SL+
Sbjct: 386 AEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLID 445
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R D KA EL RE + + L+ EA L +M +G LP
Sbjct: 446 GMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLP 505
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
TY +++ ++G +G ++L
Sbjct: 506 N-----------------------------------IMTYNSIIKGYCRSGNVKKGQQFL 530
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +D ++ ++ ++N +I + K M A + M + P+ VT+N +I+G +
Sbjct: 531 QKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQ 590
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ + + + G +PD++T+ S+I+ A ++A EM+ G P+
Sbjct: 591 GNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 236/493 (47%), Gaps = 1/493 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS YN ++ L + +D A KF++M D P+ TYNI+I +C+ G ++ A
Sbjct: 370 GCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETA 428
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + M+ G PNV T I++D C A+R+ + + E + + P+ T SL+ G
Sbjct: 429 LVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEG 488
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R +A++L + ++ + +V +L+ + I +M G P+
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPD 548
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + C+ ++ + + G P +Y +L+ L KAG E
Sbjct: 549 LLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFY 608
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + V + +YN VID FCK +++A ++ EM+ + P +VT+ ++I G K
Sbjct: 609 TMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKID 668
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L G + + ++S+ID + R ++A + E+++ G+ PN T+N
Sbjct: 669 RLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 728
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ +L +++ +L FQ M+ + +P+ T++ LI C++ K KA + M
Sbjct: 729 CLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQ 788
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G +P+ F+Y+ +I L K+G EA F ++ G DS N I+E L R +A
Sbjct: 789 GFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDA 848
Query: 485 HDIVKTSKERGIS 497
+ + + ++ +G S
Sbjct: 849 YRLFEEARLKGCS 861
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 211/481 (43%), Gaps = 5/481 (1%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P LYN ID K+ +D+A+ F +M + D TY +I +C+ ++EA+
Sbjct: 266 LEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAV 325
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L + M+ P Y Y +I G+ A + + + +LE + + P+ + ++ +
Sbjct: 326 ELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCL 385
Query: 126 FRCLDPHKAFELLIRF--MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
R + E L +F M+++ + N ++ L A + M D G P
Sbjct: 386 GR---KGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFP 442
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T + V L L++ C I + + +P TY L+E L + GR E +
Sbjct: 443 NVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLY 502
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + N Y +I F K + +I EM +P+L+ NT + K
Sbjct: 503 EQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKA 562
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E+ K R L + GF PD ++ +I L +A +A + M E G +T Y
Sbjct: 563 GEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAY 622
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N +I C G V ++ +L ++M+ P + T+ ++I +++++++A F +
Sbjct: 623 NTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 682
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ + YS+LI K GR DEA + Q G P+ YT N +L+ LV+ E
Sbjct: 683 KGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742
Query: 484 A 484
A
Sbjct: 743 A 743
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 221/500 (44%), Gaps = 11/500 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G PS ++ + +KS + A+ Q M + +P Y LI +
Sbjct: 156 MSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRD 215
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
D L L +QM+ LGYA NV+ +T LI F RV +L+ MK ++ P+
Sbjct: 216 SDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVV---- 271
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-----LSNNSMASEAAAILRK 175
L + C ++ +F E LV + + Y L +EA +
Sbjct: 272 LYNVCIDCFGKAGKVDMAWKFF-HEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEH 330
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
M +P + ++ + + +L+ ++G P +Y ++ L + G+
Sbjct: 331 MDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQ 390
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
E + + KD + N+++YN++ID CK ++ A + M+D + PN++T N
Sbjct: 391 VDEALKKFEEMKKDA-IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNI 449
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
++ CK + + L +PD T+ S+I+ L R R ++A +M++
Sbjct: 450 MVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDAN 509
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
PN + Y LIR+ G +++ +M SPD+ N + + +IEK
Sbjct: 510 QIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGR 569
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
F + LG PD SY+ LI L+K+G EA + F +M++ GC D+ N +++
Sbjct: 570 ALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGF 629
Query: 476 VQQGRFEEAHDIVKTSKERG 495
+ G+ +A+ +++ K +G
Sbjct: 630 CKSGKVNKAYQLLEEMKTKG 649
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/445 (25%), Positives = 189/445 (42%), Gaps = 35/445 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ N ++D L K+ +D A F+ + C+PD TY LI G+ R G VDEA
Sbjct: 439 GLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEA 498
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE-------------------------- 98
+L +QM PN YT LI F R +
Sbjct: 499 YKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDC 558
Query: 99 VFRVLEIMKERNV---------CPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
VF+ EI K R + P+ + L+HG+ + H+A+EL E+ +
Sbjct: 559 VFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLD 618
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
NT++ + ++A +L +M +G+ P T+ + L L+E + +
Sbjct: 619 TRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFE 678
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+G++ Y L++ K GR E + + + L NV ++N ++D K
Sbjct: 679 EAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAE 738
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+ A + M+D PN +T++ LI G CK + +K + + GFKP+ FT+
Sbjct: 739 EISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYT 798
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+MI L +A +A + E G ++ YN +I L + + RLF++ +
Sbjct: 799 TMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLK 858
Query: 390 RISPDIYTFNALIQSFCRMNKIEKA 414
S T L+ S + IE+A
Sbjct: 859 GCSIYTKTCVVLLDSLHKAECIEQA 883
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 182/421 (43%), Gaps = 46/421 (10%)
Query: 106 MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC----NTLLYRLS 161
+ E ++ PN LV GV R L R+ ER LT + C N+LL ++
Sbjct: 88 LAELDLNPNP----ELVIGVLRRLKDVNNAVNYFRWAER--LTDRAHCREAYNSLLMVMA 141
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
+ IL +M G+ P ++T V + L E + T K +P FS
Sbjct: 142 RTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFS 201
Query: 222 TYLLLMEAL-----------------------------------YKAGRDVEGDRYLNHV 246
Y L+ AL + GR L+ +
Sbjct: 202 AYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEM 261
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ L +V YN+ IDCF K +D A + EM+ + + VT+ ++I CK +
Sbjct: 262 KSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRL 321
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
++ EL + + P + +N+MI A +FEDA L G P+ ++YN +
Sbjct: 322 NEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCI 381
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ L G V +L+ F++M+ D I P++ T+N +I C+ K+E A +M GL
Sbjct: 382 LSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGL 440
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P+ + + ++ L K+ R D+A F ++ C PD+ T ++E L + GR +EA+
Sbjct: 441 FPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYK 500
Query: 487 I 487
+
Sbjct: 501 L 501
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 161/367 (43%), Gaps = 35/367 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG SP L N +D + K+ I+ FQ++ PD +Y ILIHG+ + G E
Sbjct: 543 LGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHE 602
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L M+ G + Y +IDGFC + +V + +++LE MK + P T S++
Sbjct: 603 AYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVID 662
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +A+ L E ++ + N ++Y ++++ G G +
Sbjct: 663 GLAKIDRLDEAYMLF-----EEAKSKGIELNVVIY-----------SSLIDGFGKVGRID 706
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
E+ I++ +++G+ P T+ L++AL KA E
Sbjct: 707 EAYL-------------------IMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCF 747
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + N +Y+++I CK+ ++A +EM+ + PN+ T+ T+ISG K
Sbjct: 748 QSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKA 807
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + L E G D +N++I+ L A+R DA E G T T
Sbjct: 808 GNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTC 867
Query: 364 NILIRSL 370
+L+ SL
Sbjct: 868 VVLLDSL 874
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 117/282 (41%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I LG P R Y +I LVK+ AY F M C D YN +I G C+ G
Sbjct: 575 IKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGK 634
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V++A +L+++M+ G+ P V TY +IDG R+ E + + E K + + N S
Sbjct: 635 VNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSS 694
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G + +A+ ++ M++ N LL L SEA + M D
Sbjct: 695 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLK 754
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P T+ + L N+ K+G KP TY ++ L KAG VE D
Sbjct: 755 CTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEAD 814
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
+ V++ YN +I+ N A + E R
Sbjct: 815 TLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEAR 856
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 111/239 (46%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+YN ++ + + +I EM P+ T ++ K ++ + + +
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
+ F+P + ++I L + + L +M E G N + LIR G V
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+L L +M+++ + PD+ +N I F + K++ A K F M GL D+ +Y+++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
I L K+ R +EA + F M+QN P +Y N ++ G+FE+A+ +++ + +G
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 63/170 (37%)
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
+NS++ + R +F L EM G P+ T ++ S + + Q M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ + P + LI + + F M LG + ++ LI+ + GR
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
D A M+ N PD N+ ++ + G+ + A K G+
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGL 301
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 228/464 (49%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F G+S S +I+ L + + L + ++ KP T+N LI+G+C G
Sbjct: 130 MEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGR 189
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ EA+ + + GY P VYT+T++++G C + + ++ M E + P +
Sbjct: 190 IVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSI 249
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ + + ++A +L + N+L+Y + N+ +A+ + ++M +
Sbjct: 250 IIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWN 309
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ TF V L + E + I+ ++P TY L+ + K+ E
Sbjct: 310 MKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESS 369
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
LN + + +V ++++ +D FCK M+ A I M +R + PN+VT+N+L+ G+
Sbjct: 370 TLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGY 429
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C +++ + R++ +++ G PD ++N +I C++ R ++A EM G+ PN+
Sbjct: 430 CLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNS 489
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
IT+ LI LC G + LF+KM + PD+ T++ L+ FC+ +++A F +
Sbjct: 490 ITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEA 549
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+ L+P++ L+ + K+G+ ++AK+ F S+ PD
Sbjct: 550 LKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPD 593
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 110/483 (22%), Positives = 230/483 (47%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P +N ++ ALV+ D +++M +T ILI+ +C + +V +
Sbjct: 102 PCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSV 161
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ LG+ P++ T+ LI+G C R+ E L+ + R P T +V+G+ +
Sbjct: 162 LGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCK 221
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
A + + +E + + + + ++ L N + +EA + M G P T
Sbjct: 222 IGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVT 281
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + + + + ++ +KP T+ +L++AL K G +E +
Sbjct: 282 YNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMI 341
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ + ++ +Y+ +I CK ++ ++ + EM R+I P++VTF+ + CK V
Sbjct: 342 QIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVS 401
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ + ++ +++E G +P+ T+NS++D C + ++A MV G P+ ++YNILI
Sbjct: 402 EAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILI 461
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+ C + + +LF +M ++P+ T LI C+ + A++ F M + G
Sbjct: 462 KGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCP 521
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD +YS L+ K G DEA F +++++ P+ ++L + + G+ E+A ++
Sbjct: 522 PDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKEL 581
Query: 488 VKT 490
+
Sbjct: 582 FSS 584
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 221/459 (48%), Gaps = 6/459 (1%)
Query: 28 LAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILI 87
LAY F QM P +N L+ + R+ D + + ++ME G + +VYT TILI
Sbjct: 89 LAY--FNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILI 146
Query: 88 DGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH--KAFELLIRFMERE 145
+ C+ V F VL + + P+ T +L++G+ C++ +A E L M R
Sbjct: 147 NCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGL--CIEGRIVEAMEQLDYIMSRG 204
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
++ L S A ++KM + PE ++ + L +NE
Sbjct: 205 YQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAV 264
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
+ G+ P TY L+ + +G+ + + + + +V ++++++D
Sbjct: 265 DLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDAL 324
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
CK ++ A + +M + P++VT+++LI G CK + ++ LL +L +PD
Sbjct: 325 CKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDV 384
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
TF+ +D C+ +A ++ M+E G+ PN +TYN L+ C + + ++F
Sbjct: 385 VTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDI 444
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M +PD+ ++N LI+ +C+ +I++A++ F M GL P++ +++ LI L ++GR
Sbjct: 445 MVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGR 504
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
AK+ F M +GC PD T + +L + G +EA
Sbjct: 505 PYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEA 543
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 163/327 (49%)
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
++L K+ G+ P TF+ + L + E LD + RG +P T+ +++ L
Sbjct: 160 SVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGL 219
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
K G+ ++ + + V SY+++ID CK +++ A ++ MR I+P +
Sbjct: 220 CKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTV 279
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
VT+N+LI G C + + L +LE KPD TF+ ++D LC+ +AL +
Sbjct: 280 VTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGK 339
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M++ + P+ +TY+ LI +C S L +M + I PD+ TF+ + FC+
Sbjct: 340 MIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGM 399
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+ +A+ M+ GLRP+ +Y++L+ + DEA++ F M GC PD + N+
Sbjct: 400 VSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNI 459
Query: 471 ILETLVQQGRFEEAHDIVKTSKERGIS 497
+++ + R +EA + +G++
Sbjct: 460 LIKGYCKSERIDEAKQLFDEMSHKGLT 486
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 192/395 (48%), Gaps = 8/395 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ + +++ L K A + ++M C+P+ +Y+I+I +C+ +V+EA
Sbjct: 204 GYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEA 263
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L M +G +P V TY LI G CN+ + + + + M E N+ P+ T LV
Sbjct: 264 VDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDA 323
Query: 125 VFR---CLDPHKAFELLIRF-MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + L+ F +I+ ME + +T ++L++ + +S+ E++ +L +M R
Sbjct: 324 LCKEGVVLEALSVFGKMIQIAMEPDIVTY----SSLIHGVCKSSLWKESSTLLNEMLSRN 379
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ TF V ++E I++ I+RG++P TY LM+ + E
Sbjct: 380 IRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEAR 439
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + +V SYN++I +CK +D A ++ EM + + PN +T TLISG
Sbjct: 440 KVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGL 499
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ + +EL + G PD T+++++ C+ ++AL + + + PN
Sbjct: 500 CQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNH 559
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
+ IL+ +C G + + LF + + + PD+
Sbjct: 560 VICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 127/243 (52%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+V + ++I+C C ++++ + ++ P+++TFNTLI+G C + + + E L
Sbjct: 138 SVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQL 197
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++ G++P +T +++ LC+ + A+ + +MVE P ++Y+I+I SLC
Sbjct: 198 DYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKN 257
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
V ++ LF M++ ISP + T+N+LI C + ++A F ML ++PD ++
Sbjct: 258 RLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTF 317
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
S L+ AL K G EA F M Q PD T + ++ + + ++E+ ++
Sbjct: 318 SILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLS 377
Query: 494 RGI 496
R I
Sbjct: 378 RNI 380
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 143/329 (43%)
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
+A A +M P + F+ + LV + I GV T +L+
Sbjct: 87 DALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILI 146
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
L G L +FK ++ ++N +I+ C + A E + R
Sbjct: 147 NCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQ 206
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
P + T +++G CK + + ++E +P+ +++ +ID LC+ +A+D
Sbjct: 207 PTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDL 266
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
M G+ P +TYN LI +C G ++ LF++M + PD+ TF+ L+ + C+
Sbjct: 267 FYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCK 326
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ +A F M+ + + PD +YS+LI + KS + E+ M PD T
Sbjct: 327 EGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVT 386
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERGI 496
++ ++ ++G EA I+ ERG+
Sbjct: 387 FSIWVDVFCKKGMVSEAQSIINLMIERGL 415
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%)
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
FN ++ L R ++ + +M +GV + T ILI LC + V + K+
Sbjct: 107 FNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIF 166
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
P I TFN LI C +I +A + +++ G +P ++++ ++ L K G+
Sbjct: 167 KLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTS 226
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
A M + C P+ + ++I+++L + EA D+ + GIS
Sbjct: 227 AAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGIS 276
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 133/505 (26%), Positives = 227/505 (44%), Gaps = 41/505 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P VI++L N +D A+ ++ +PD T+ LI G+C G + EA
Sbjct: 75 GIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEA 134
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M G G+ PNV TY LI+G C ++V E F + M + + PN T SL+HG
Sbjct: 135 LHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHG 194
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
L + E + +T ++ +M D +P+
Sbjct: 195 -------------LCKLCEWKHVT----------------------TLMNEMVDSKIMPD 219
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEA-LYKAGRDVEGDRYL 243
T + V L + E ++D I RGV+P TY LM+ + DV +
Sbjct: 220 VFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFD 279
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
V KD V+NV SYN +I+ +CK+ +D+A + EM +++ PN VT+NTLI G C
Sbjct: 280 TMVHKD-CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 338
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ L ++ G PD T+ ++ D LC+ + A+ L + P+ Y
Sbjct: 339 GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIY 398
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
++ +C G++ + LF + + + P+++T+N +I C+ + +A K F M
Sbjct: 399 TTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 458
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G P++ +Y+ + + +++ + M G + D T+ L++ L G +
Sbjct: 459 NGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQS 518
Query: 484 AHDIV----KTSKERGISFKSFPGL 504
I+ +S+ G +S P L
Sbjct: 519 VKQILCKPSSSSRPSGTQMRSLPPL 543
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 222/476 (46%), Gaps = 4/476 (0%)
Query: 24 NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTY 83
N++D A F +M Q P +N L+ I + L L +QM+ G P+VYT
Sbjct: 24 NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 83
Query: 84 TILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH--KAFELLIRF 141
I+I+ C+ RV F L + + P+ T +L+ G+ C++ +A L +
Sbjct: 84 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGL--CVEGKIGEALHLFDKM 141
Query: 142 MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
+ + TL+ L + +EA I +M +G P T++ + L +
Sbjct: 142 IGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEW 201
Query: 202 NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
+++ + + P T +++AL K G E ++ + + NV +YN +
Sbjct: 202 KHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNAL 261
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
+D C N +D A ++ M +D N++++NTLI+G+CK V K L +
Sbjct: 262 MDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 321
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
P+ T+N++I LC R +DA+ EMV G P+ +TY L LC + +++
Sbjct: 322 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 381
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
L + ++ PDI + ++ CR ++E A F ++ + GL+P+ ++Y+ +I L
Sbjct: 382 LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 441
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
K G EA + F M +NGC+P+ T NLI ++ ++++ RG S
Sbjct: 442 KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFS 497
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 136/561 (24%), Positives = 232/561 (41%), Gaps = 70/561 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP+ YN++I L K +M + PD FT N ++ +C+ G+V EA
Sbjct: 180 GISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEA 239
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+V M G PNV TY L+DG C V +V + M ++ N + +L++G
Sbjct: 240 HDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLING 299
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ KA L M R+ LT V NTL++ L + +A ++ +M RG +P
Sbjct: 300 YCKIQSVDKAM-YLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIP 358
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ L L++ +L P Y +++ + +AG +
Sbjct: 359 DLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLF 418
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+++ L NV +YN++I CK ++ A+++ EM +PN T+N + G ++
Sbjct: 419 SNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRN 478
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMI-------------DCLCRA------------ 338
E +T ELL +L GF D T ++ LC+
Sbjct: 479 NEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMR 538
Query: 339 ---------------------HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
+ +DAL + M+ PP+T+ + L+ S+ + +
Sbjct: 539 SLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYS 598
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA----------------------E 415
L L +M + I PD+YT N LI SFC + ++ A
Sbjct: 599 TVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLM 658
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
M+T G+ PD F+Y++LI AL + M + P+ + +++ L
Sbjct: 659 NGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 718
Query: 476 VQQGRFEEAHDIVKTSKERGI 496
++G AHD+V +RG+
Sbjct: 719 CKEGMIAIAHDVVDMMIKRGV 739
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 195/445 (43%), Gaps = 48/445 (10%)
Query: 24 NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTY 83
N++D A F +M P + L+ I ++ L L QM+ G P+VYT
Sbjct: 560 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 619
Query: 84 TILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME 143
ILI+ FC+ +R+ F VL + + P+ T +L++G+ + ++ + +
Sbjct: 620 NILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK---------MITKGIS 670
Query: 144 REPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
+ T N+L++ L N +L +M + +P F V L +
Sbjct: 671 PDIFTY----NSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAI 726
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
++D IKRGV+P TY LM D
Sbjct: 727 AHDVVDMMIKRGVEPDVVTYTALM-----------------------------------D 751
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
C + MD A ++ M + PN+ ++N LI+G+C+ + K LL + G
Sbjct: 752 GHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIA 811
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D T+N++I LC R + A+ EMV G P+ +TY IL+ LC +A ++ L
Sbjct: 812 DTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLL 871
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+ ++ + DI +N I CR ++E A F ++ + GL+PD +Y+ +I L K
Sbjct: 872 KAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKR 931
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTS 468
G DEA + F M++N +S +S
Sbjct: 932 GLLDEANKLFRKMDENDIWSNSTSS 956
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/534 (23%), Positives = 232/534 (43%), Gaps = 35/534 (6%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P+ YN +I L K + A F +M+ + C P+ TYN++ G R
Sbjct: 421 LSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNE 480
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ L+++M G++ +V T T+L+ G + + + + + + P+ +RS
Sbjct: 481 ALRTIELLEEMLARGFSVDVSTTTLLV-GMLSDDGLDQSVKQILCKPSSSSRPSGTQMRS 539
Query: 121 L-------VHGVFRCLDPH-----KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE 168
L H PH A R + P + LL ++ S
Sbjct: 540 LPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYST 599
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
++ +M G P+ T + + L +L +K G +P TY LM
Sbjct: 600 VLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMN 659
Query: 229 ALYKA-GRDVEGDRY---------------------LNHVFKDRLVSNVNSYNMVIDCFC 266
L K + + D + LN + +++ NV ++ V+D C
Sbjct: 660 GLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALC 719
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K M+ A ++ M R + P++VT+ L+ GHC +E+ + ++ ++ G P+
Sbjct: 720 KEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVR 779
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
++N +I+ C+ R + A+ L +M G+ +T+TYN LI LC +G + ++ LF +M
Sbjct: 780 SYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEM 839
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
A PD+ T+ L+ C+ + + +A ++ L D Y+ I + ++G
Sbjct: 840 VASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGEL 899
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+ A+ F ++ G PD T N+++ L ++G +EA+ + + E I S
Sbjct: 900 EAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNS 953
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 193/465 (41%), Gaps = 48/465 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P + +I L I A F +M + +P+ TY LI+G+C+ V E
Sbjct: 109 LGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTE 168
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + +M G +PN+ TY LI G C V ++ M + + P+ T+
Sbjct: 169 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL----- 223
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
NT++ L M +EA ++ M RG P
Sbjct: 224 ------------------------------NTVVDALCKEGMVAEAHDVVDMMIHRGVEP 253
Query: 184 ESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
T++ + CL +D+ + DT + + +Y L+ K + V+
Sbjct: 254 NVVTYNALMDGHCLRNEVDV--AVKVFDTMVHKDCVANVISYNTLINGYCKI-QSVDKAM 310
Query: 242 YL-NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
YL + + L N +YN +I C V + A + EM R P+LVT+ TL
Sbjct: 311 YLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYL 370
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ + K LL + + PD + +++D +CRA EDA D S + G+ PN
Sbjct: 371 CKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNV 430
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
TYNI+I LC G +A + +LF +M + SP+ T+N + + F R N+ + +
Sbjct: 431 WTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEE 490
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
ML G D + + L+ L G KQ C P S
Sbjct: 491 MLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL-------CKPSS 528
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y ++D L K++ + A + + + D YNI I G+CR G ++ A
Sbjct: 843 GQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAA 902
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
L + G P+V TY I+I G C + E ++ M E ++ N + R+
Sbjct: 903 RDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSRN 958
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 215/481 (44%), Gaps = 38/481 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMS--VDQCKPDRFTYNILIHGICRIGVVD 62
G++P T YN ++ L ++ + A F QM C DR++Y ILI G+C G +D
Sbjct: 120 GLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACY-DRYSYTILIKGLCAAGRID 178
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+A R+ +M P V+TYT+L+DG C +RV E +L M + V PN T +L+
Sbjct: 179 DACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALI 238
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G L + +L KM + +
Sbjct: 239 GG-----------------------------------LCQEGRFDDVTKLLEKMEIQRHS 263
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ T+ V L + +L I +GV TY L+ K G
Sbjct: 264 PDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDV 323
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + ++R+ V ++N VI FC + +A +M ++PN VTFN+LISG C
Sbjct: 324 LQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCS 383
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
E LL ++ E G PD+ T+ ID LC + E+A S + G+ + +
Sbjct: 384 VGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVI 443
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y L+ C +GD+ + L +KM ++ PD++T+N LI C++ ++++A M
Sbjct: 444 YTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMK 503
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G+ P +++ LIK ++ + +A + + M +GC PD T L + T +G +
Sbjct: 504 KQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATK 563
Query: 483 E 483
E
Sbjct: 564 E 564
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 126/522 (24%), Positives = 222/522 (42%), Gaps = 51/522 (9%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y +I L + ID A F +MS C+P TY +L+ G+C++ V EA L+ +M
Sbjct: 164 YTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMV 223
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G PNV TY LI G C R +V ++LE M+ + P+ T +VHG+ +
Sbjct: 224 NKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVG 283
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
++L + + + L N L+ A +L+ M P TF+ +
Sbjct: 284 HGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVI 343
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
G +++ L G+ P T+ L+ G R L+ + + ++
Sbjct: 344 HGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVL 403
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+ +Y + ID C ++ A + + + I + V + +L+ G+C+ ++ L
Sbjct: 404 PDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGL 463
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+ + PD T+N++ID LC+ R + A+D L +M + G+ P T T+NILI+ +
Sbjct: 464 MEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLW 523
Query: 373 IGDVARSLRLFQKM-----QADR--------------------------------ISPDI 395
A + +++++M + D+ + PD+
Sbjct: 524 DKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDV 583
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK---SGRFDEAK-- 450
T+NA+I+++ EKA A ML++ + PD +YS L+ + S FD K
Sbjct: 584 ETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIW 643
Query: 451 ---------QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+ F M ++ P T +L L Q R EE
Sbjct: 644 KMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEE 685
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/498 (24%), Positives = 215/498 (43%), Gaps = 43/498 (8%)
Query: 6 ISPS-TRLYNAVIDALVK--SNSIDLAYL--KFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ PS R +NA + A S + LA+L F M P+R TYN LI+ C++ +
Sbjct: 46 LDPSDVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLAL 105
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER-NVCPNEATVR 119
+ +A + +M G AP+ +TY L+ G C A +A + M R C + +
Sbjct: 106 LADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYT 165
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
L+ G L +A + KM R
Sbjct: 166 ILIKG-----------------------------------LCAAGRIDDACRVFAKM-SR 189
Query: 180 GYL-PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G+ P T+ + L + E +L + +GV P TY L+ L + GR +
Sbjct: 190 GWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDD 249
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ L + R + +Y V+ CK + ++ E + +A ++T+N LI+
Sbjct: 250 VTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALIN 309
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G+CK ++ ++L ++ P TFN +I C + A+ L++M G+ P
Sbjct: 310 GYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSP 369
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
NT+T+N LI C++G+ +LRL M+ + PD T+ I + C ++E+A F
Sbjct: 370 NTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLF 429
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+ G++ N Y++L+ + G D A M C PD +T N +++ L +
Sbjct: 430 SCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKV 489
Query: 479 GRFEEAHDIVKTSKERGI 496
R + A D++ K++GI
Sbjct: 490 KRLDRAIDLLDKMKKQGI 507
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 132/562 (23%), Positives = 211/562 (37%), Gaps = 86/562 (15%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YNA+I L + D ++M + + PD +TY ++HG+C+ G V
Sbjct: 226 GVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHG 285
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ + G G A V TY LI+G+C + VL++MK V P T ++HG
Sbjct: 286 AKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHG 345
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
HKA L + + N+L+ + A +L M + G LP+
Sbjct: 346 FCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPD 405
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L L E + +G+K Y L+ + G +
Sbjct: 406 RQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLME 465
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL-------- 296
+ + + +V++YN +ID CKV +DRA ++ +M+ + I P TFN L
Sbjct: 466 KMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDK 525
Query: 297 ------------ISGHCK-DAEVH-----------KTRE-----LLVMLLECGFKPDKFT 327
IS CK D + + T+E +V + E G PD T
Sbjct: 526 KHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVET 585
Query: 328 FNSMIDCLCRAHRFEDAL-------------DCLS------------------------- 349
+N++I A E A DC +
Sbjct: 586 YNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKM 645
Query: 350 -----------EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+M E P TY L+R LC + L KMQ + I D
Sbjct: 646 VDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMS 705
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+ L+ +C + +A + F SM +P S L+ L SG A F M
Sbjct: 706 DYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLG 765
Query: 459 NGCNPDSYTSNLILETLVQQGR 480
G N D L+++ L ++G
Sbjct: 766 LGYNYDEVVWKLLIDCLHEKGH 787
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 111/213 (52%), Gaps = 1/213 (0%)
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
PN T+NTLI+ HCK A + R LV + E G PD FT+N ++ LCRA A
Sbjct: 88 PNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGL 147
Query: 348 LSEMVE-WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
+M WG + +Y ILI+ LCA G + + R+F KM P ++T+ L+ C
Sbjct: 148 FVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLC 207
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
++ ++ +AE M+ G+ P+ +Y+ALI L + GRFD+ + ME +PD +
Sbjct: 208 KVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCW 267
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
T ++ L + G+ ++ + +G++ +
Sbjct: 268 TYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALE 300
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 122/289 (42%), Gaps = 1/289 (0%)
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+K G P TY L+ A K + L + + L + +YN ++ C+
Sbjct: 80 AMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAG 139
Query: 270 MMDRATEICREMRDRDIAP-NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
++ A + +M R A + ++ LI G C + + + +P T+
Sbjct: 140 LLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTY 199
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
++D LC+ R +A L EMV GV PN +TYN LI LC G +L +KM+
Sbjct: 200 TVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEI 259
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
R SPD +T+ ++ C+ K+ K + G+ + +Y+ALI K G
Sbjct: 260 QRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKA 319
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
A M++N NP T N ++ G+ +A + G+S
Sbjct: 320 ALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLS 368
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 161/417 (38%), Gaps = 55/417 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P + Y IDAL ++ A+ F + + K Y L+HG C++G +D A
Sbjct: 401 GVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSA 460
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+++M P+V+TY LIDG C KR+ +L+ MK++ + P T L+
Sbjct: 461 FGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQ 520
Query: 125 VF---RCLDPHKAFELLIRF-MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + D K +E +I + + T L +T + + + A + +M + G
Sbjct: 521 MLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVV--EMHEAG 578
Query: 181 YLPESSTFDYTVT--------------------------CLVTGLDLNETCG-------- 206
P+ T++ + C + LN C
Sbjct: 579 VFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFD 638
Query: 207 ---------------ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ + + P STY L+ L R E + L + + +
Sbjct: 639 NEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSI 698
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+ + + + ++ C+C + M A E R M + P L + L+SG C +
Sbjct: 699 LLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVS 758
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+ +L G+ D+ + +IDCL L+ LS M +T TY L+R
Sbjct: 759 IFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLVR 815
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 232/493 (47%), Gaps = 43/493 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P T L+N VI L ++ + A ++QM+ D PD TY L+HG+ + + +A+
Sbjct: 1 MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKARRLRDAV 59
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+++++M + P+ T T+++ C RV + ++E M R + N T +LV G+
Sbjct: 60 QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+C ER EA A++ M +RG P
Sbjct: 120 CKC--------------ER---------------------LDEAVALVETMAERGCAPTV 144
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV-EGDRYLN 244
T++ +T ++E G ++ + G P TY L+ K+ RDV G L
Sbjct: 145 VTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKS-RDVGRGLELLG 203
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
V + ++ +Y+ VID CK + A +I EM AP +T+N+LI G+C+
Sbjct: 204 EVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAG 260
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + LL +++ PD T+ +++ C+ R +DA + +MV + P+ +T+
Sbjct: 261 DMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFT 320
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ LC G + +L L +++ P IYT+N ++ +C+ N++ KAE+ +
Sbjct: 321 SLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSR 380
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTF--LSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G P+ +Y+ L+ ++GR D+A Q L+ E C +IL+ L + GR +
Sbjct: 381 GFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTD 440
Query: 483 EAHDIVKTSKERG 495
+A + +RG
Sbjct: 441 DAVQFYEEMIQRG 453
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 203/446 (45%), Gaps = 5/446 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P V+ +L + +D A ++M + TY+ L+ G+C+ +DEA+ L
Sbjct: 72 PDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVAL 131
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
V+ M G AP V TY +I GFC A+RV E +E M P+ T +L+ G +
Sbjct: 132 VETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCK 191
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D + ELL R + +T++ L +A I +M P + T
Sbjct: 192 SRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAIT 248
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + D++E +L + P TY LM A K GR + +
Sbjct: 249 YNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMV 308
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
++L +V ++ ++D C M+ A E+ E+ R P + T+N ++ G+CK +V
Sbjct: 309 ANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVR 368
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP-PNTIT-YNI 365
K EL+ GF P+ T+N ++ CRA R + AL L ++ G P P ++ Y I
Sbjct: 369 KAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAI 428
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
++ +LC G +++ +++M P TF ++ + C+ ++ ++A + M+ G
Sbjct: 429 ILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYG 488
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQ 451
P + A++ A ++G +A +
Sbjct: 489 HTPGPGTCDAVVSAYCRAGMIQKADE 514
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 192/414 (46%), Gaps = 5/414 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++ + Y+A++D L K +D A + M+ C P TYN +I G CR VDEA
Sbjct: 104 GMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEA 163
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++QM G P++ TYT LI GFC ++ V +L + R P+ T +++ G
Sbjct: 164 HGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDG 223
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A ++ F E + N+L+ EA +L KM D P+
Sbjct: 224 LCKAGRLRDAVDI---FEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPD 280
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ ++ L++ + + + P T+ L++ L GR + L
Sbjct: 281 VVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLE 340
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + +YN V+D +CK N + +A E+ + R R PN VT+N L++G C+
Sbjct: 341 EITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAG 400
Query: 305 EVHKTRELLVML-LECGFKPDKFTFNSMI-DCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + L L E G P ++I D LCR R +DA+ EM++ G P T
Sbjct: 401 RTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAAT 460
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
+ ++ +LC ++ L ++M +P T +A++ ++CR I+KA++
Sbjct: 461 FATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADE 514
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 169/384 (44%), Gaps = 40/384 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P+ YN++I ++ +D A+ +QM + C PD TY LI G C+ V
Sbjct: 139 GCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRG 198
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+ ++ G+ P++ TY+ +IDG C A R+ + ++I +E + P T SL+ G
Sbjct: 199 LELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA---VDIFEEMSCAPTAITYNSLIGG 255
Query: 125 VFRCLDPHKAFELLIRFMERE-------------------------PLTQKLVCN----- 154
R D +A LL + ++ + L Q++V N
Sbjct: 256 YCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPD 315
Query: 155 -----TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+L+ L +A +L ++ RG P T++ V + + ++
Sbjct: 316 VVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVA 375
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR--LVSNVNSYNMVIDCFCK 267
F RG P TY +L+ +AGR + +YL+ + + ++V Y +++D C+
Sbjct: 376 DFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCR 435
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
D A + EM R P TF T++ CK + + ELL +++ G P T
Sbjct: 436 DGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGT 495
Query: 328 FNSMIDCLCRAHRFEDALDCLSEM 351
++++ CRA + A + SE+
Sbjct: 496 CDAVVSAYCRAGMIQKADELASEL 519
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 124/281 (44%), Gaps = 2/281 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ +P+ YN++I ++ +D A +M D+C PD TY L+ C++G +D+
Sbjct: 240 MSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDD 299
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L +QM +P+V T+T L+DG C R+ + +LE + R P T +V
Sbjct: 300 AYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVD 359
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + KA EL+ F R + + N L+ +A L ++ G
Sbjct: 360 GYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPC 419
Query: 184 ESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+S Y + L ++ + I+RG P +T+ ++ AL KA + +
Sbjct: 420 PTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHE 479
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
L + K + + V+ +C+ M+ +A E+ E+R
Sbjct: 480 LLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 520
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 132/497 (26%), Positives = 240/497 (48%), Gaps = 3/497 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS YN ++ L K D A F++M D P+ TYNI+I +C+ G V+ A
Sbjct: 231 GCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRD-AMPNLPTYNIIIGMLCKAGNVEAA 289
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ M+ G PNV T I+ID C A+++ E + E M + P+ AT SL+ G
Sbjct: 290 FKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDG 349
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A+ + R ++ + + +V +L+ + + ++M G P+
Sbjct: 350 LGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPD 409
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + C+ + + + + RG P +Y +L+ +L KAG E L
Sbjct: 410 LMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYE-LY 468
Query: 245 HVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ KD+ V + +YN VID FCK +++A ++ EM+ P +VT+ +++ G K
Sbjct: 469 YAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKI 528
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + L G + ++ ++S+ID + R ++A + EM++ G+ PN T+
Sbjct: 529 DRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTW 588
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L+ L ++ +L FQ M+ + +P+ T+ LI C++ K KA + M
Sbjct: 589 NCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQK 648
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL+P+ +Y+A+I L KSG +A F +G PDS + N ++E L R +
Sbjct: 649 QGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALD 708
Query: 484 AHDIVKTSKERGISFKS 500
A+ + + ++ +G S +
Sbjct: 709 AYQLFEETRLKGCSIHT 725
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 210/473 (44%), Gaps = 1/473 (0%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
LYN ID K +D+A+ F +M + PD TY ++ +C+ +DEA+ + +QM
Sbjct: 133 LYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQM 192
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
E P Y Y +I G+ +A + E + +LE + + P+ ++ + +
Sbjct: 193 EQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKT 252
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
KA + M+R+ + N ++ L A + M + G P T +
Sbjct: 253 DKALRIFEE-MKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIM 311
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ L L+E C I + + P +T+ L++ L K GR + R +
Sbjct: 312 IDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQ 371
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+ NV Y +I F K + + ++ +EM +P+L+ NT + K E K R
Sbjct: 372 IPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRA 431
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
L + GF PD +++ +I L +A + + M + G +T YN +I C
Sbjct: 432 LFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFC 491
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
G V ++ +L ++M+ P + T+ +++ +++++++A F + G+ +
Sbjct: 492 KSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQV 551
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
YS+LI K GR DEA M Q G P+ YT N +L+ LV+ EA
Sbjct: 552 IYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEA 604
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 201/445 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ R N +ID L K+ +D A F+ M C PD T+ LI G+ + G VD+A
Sbjct: 300 GLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDA 359
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R+ ++M PNV YT LI F R + ++ + M P+ + + +
Sbjct: 360 YRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDC 419
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
VF+ + K L R L + L++ L A E + M D+G + +
Sbjct: 420 VFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLD 479
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ + +N+ +L+ G P TY +++ L K R E
Sbjct: 480 TRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFE 539
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N Y+ +ID F KV +D A + EM + + PN+ T+N L+ G K
Sbjct: 540 EAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAE 599
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E+++ + + P++ T+ +I+ LC+ +F A EM + G+ PNTITY
Sbjct: 600 EINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYT 659
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I L G+VA++ LF++ +A PD ++NA+I+ N+ A + F
Sbjct: 660 AMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLK 719
Query: 425 GLRPDNFSYSALIKALIKSGRFDEA 449
G + AL+ AL K+ ++A
Sbjct: 720 GCSIHTKTCVALLDALHKAECLEQA 744
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 208/494 (42%), Gaps = 1/494 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG + L +I + +D A +M + D YN+ I ++G VD
Sbjct: 90 LGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDM 149
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + +M+ G P+ TYT ++ C A R+ E + E M++ P +++
Sbjct: 150 AWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIM 209
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G +A+ LL R + + + N +L L +A I +M R +P
Sbjct: 210 GYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEM-KRDAMP 268
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + L ++ + D + G+ P T ++++ L KA + E
Sbjct: 269 NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIF 328
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + ++ +ID K +D A I M D D PN+V + +LI K
Sbjct: 329 EGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKC 388
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ ++ G PD N+ +DC+ +A E E+ G P+T +Y
Sbjct: 389 DRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSY 448
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+ILI SL G + L+ M+ D +N +I FC+ K+ KA + M T
Sbjct: 449 SILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKT 508
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+G P +Y +++ L K R DEA F + NG + + +++ + GR +E
Sbjct: 509 MGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDE 568
Query: 484 AHDIVKTSKERGIS 497
A+ +++ ++G++
Sbjct: 569 AYLVMEEMMQKGLT 582
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 108/477 (22%), Positives = 199/477 (41%), Gaps = 3/477 (0%)
Query: 20 LVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPN 79
+V++ + D +MS+ P +T L+ + + EA L++ M + P
Sbjct: 1 MVRTRNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPA 60
Query: 80 VYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLI 139
YT LI + + M+E N + +L+ R A LL
Sbjct: 61 FSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLD 120
Query: 140 RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL 199
++ N + A +M G +P+ T+ + L
Sbjct: 121 EMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKAN 180
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
L+E I + + P Y ++ AG+ E L + +V +YN
Sbjct: 181 RLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYN 240
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
++ C K D+A I EM+ RD PNL T+N +I CK V ++ + E
Sbjct: 241 CILTCLGKKGKTDKALRIFEEMK-RDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEA 299
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G P+ T N MID LC+A + ++A M P+ T+ LI L G V +
Sbjct: 300 GLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDA 359
Query: 380 LRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
R++++M AD+I P++ + +LI++F + ++ E K + M+ G PD + +
Sbjct: 360 YRIYERMLDADQI-PNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMD 418
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ K+G ++ + F ++ G PD+ + ++++ +LV+ G E +++ K++G
Sbjct: 419 CVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQG 475
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 121/231 (52%), Gaps = 2/231 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P+ Y +V+D L K + +D AY+ F++ + + ++ Y+ LI G ++G VDE
Sbjct: 509 MGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDE 568
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++++M G PNVYT+ L+DG A+ + E + MK+ PN+ T L++
Sbjct: 569 AYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILIN 628
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + +KAF + + M+++ L + T ++ L+ + ++A+++ + G +
Sbjct: 629 GLCKVRKFNKAF-VFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGI 687
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
P+S++++ + L + + + +G T + L++AL+KA
Sbjct: 688 PDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKA 738
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 128/298 (42%), Gaps = 5/298 (1%)
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
IL G P T + L+ + K+ + +E L + + ++Y +I
Sbjct: 13 ILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALS 72
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
+V DR + +M++ N+ TLI ++ V LL + F D
Sbjct: 73 EVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIV 132
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
+N IDC + + + A EM G+ P+ +TY ++ LC + ++ +F++M
Sbjct: 133 LYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQM 192
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ +R P Y +N +I + K ++A G P +Y+ ++ L K G+
Sbjct: 193 EQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKT 252
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFPGL 504
D+A + F M+++ P+ T N+I+ L + G E A + KE G+ FP +
Sbjct: 253 DKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGL----FPNV 305
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+T Y A+I L KS ++ A F++ PD +YN +I G+ +A
Sbjct: 650 GLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDA 709
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
+L ++ G + + T L+D A+ + + V +++E
Sbjct: 710 YQLFEETRLKGCSIHTKTCVALLDALHKAECLEQAAIVGAVLRE 753
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 125/489 (25%), Positives = 228/489 (46%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
PS +NA++ K S+D+A F M PD ++YNIL+HG+C G ++EAL
Sbjct: 267 GPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALE 326
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
ME G P++ TY IL +GF ++ ++V++ M + P+ T L+ G
Sbjct: 327 FTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHC 386
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + ++F+L + + + + LL L + EA +L +M G P+
Sbjct: 387 QMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLL 446
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L + E + + + + P ++ L++ G E Y + V
Sbjct: 447 TYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSV 506
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K + + YN++ID + K+ + A +++ ++ I+P +VTFN+LI G CK ++
Sbjct: 507 TKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKL 566
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ +LL + G P T+ ++++ C D L EM + P ITY ++
Sbjct: 567 AEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVV 626
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
++ LC G + S++L + M A + PD T+N +IQSFC+ + ++KA + ML L
Sbjct: 627 VKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSL 686
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+P +Y+ LI L G +A + ++++ I++ +G + A
Sbjct: 687 QPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALV 746
Query: 487 IVKTSKERG 495
ERG
Sbjct: 747 FFHQMVERG 755
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 210/460 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN + + I A+ Q+M ++ PD TY ILI G C++G ++E+
Sbjct: 335 GVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEES 394
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L ++M G ++ TYT+L+ C + R+ E +L M+ + P+ T L+HG
Sbjct: 395 FKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHG 454
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A EL + VC+ ++ L SEA + E
Sbjct: 455 LCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEE 514
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + ++ E I++G+ P T+ L+ K G+ E + L+
Sbjct: 515 IILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLD 574
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ LV +Y +++ +C+ M ++ EM + I P +T+ ++ G CK+
Sbjct: 575 TIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEG 634
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+H++ +LL + G PD+ T+N++I C+AH + A ++M++ + P+ +TYN
Sbjct: 635 RLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYN 694
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI LC G++ + RL +Q I + +I++ C ++ A F M+
Sbjct: 695 VLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVER 754
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
G YSA+I L K +AK F M +G PD
Sbjct: 755 GFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPD 794
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/460 (24%), Positives = 210/460 (45%), Gaps = 2/460 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P Y +I + +I+ ++ ++M K TY +L+ +C+ G +DEA
Sbjct: 370 GLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEA 429
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +ME +G P++ TY++LI G C V E + E M + + PN +++ G
Sbjct: 430 VILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISG 489
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F +A + + + ++ N ++ + EA +++ ++G P
Sbjct: 490 LFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPT 549
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + L E +LDT G+ P TY LM + G D+ +
Sbjct: 550 IVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEG-DMHSMFDML 608
Query: 245 HVFKDRLVSNVN-SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
H + + + +Y +V+ CK + + ++ + M R + P+ +T+NT+I CK
Sbjct: 609 HEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKA 668
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ K +L +L+ +P T+N +I+ LC +DA L + + + + Y
Sbjct: 669 HDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAY 728
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+I++ CA GDV +L F +M I ++A+I C+ N I A+ F MLT
Sbjct: 729 TTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLT 788
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
G+ PD ++ A +SG + + F M + G P
Sbjct: 789 HGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 142/266 (53%), Gaps = 1/266 (0%)
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
D+ D Y N + + N + ++ID C+ + + A RE + P++V+FN
Sbjct: 217 DIMWDVY-NEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNA 275
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
L+SG CK V + M+++ G PD +++N ++ LC A E+AL+ ++M G
Sbjct: 276 LMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHG 335
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
V P+ +TYNIL +G ++ + ++ Q+M + ++PD+ T+ LI C+M IE++
Sbjct: 336 VEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESF 395
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
K ML+ GL+ +Y+ L+ +L KSGR DEA ME G PD T ++++ L
Sbjct: 396 KLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGL 455
Query: 476 VQQGRFEEAHDIVKTSKERGISFKSF 501
++G EEA ++ + + I SF
Sbjct: 456 CKRGAVEEAIELYEEMCSKRIYPNSF 481
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/476 (24%), Positives = 220/476 (46%), Gaps = 27/476 (5%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQM---EGLGYAP---------------NVYTY 83
+ R ++ I+ H + R G E R++ QM EG G AP N +
Sbjct: 112 RHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNVVW 171
Query: 84 TILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME 143
+L + A+ V + VL MK N+ + AT SL++ L + ++
Sbjct: 172 DMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYN----LRHTDIMWDVYNEIK 227
Query: 144 REPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT--CLVTGLD 200
+ Q N +L L S +A LR+ G + P +F+ ++ C + +D
Sbjct: 228 ASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVD 287
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
+ ++ IK G+ P +Y +L+ L AG E + N + + ++ +YN+
Sbjct: 288 VAKS--FFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNI 345
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
+ + F + ++ A ++ + M + P+LVT+ LI GHC+ + ++ +L +L G
Sbjct: 346 LANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQG 405
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
K T+ ++ LC++ R ++A+ L EM G+ P+ +TY++LI LC G V ++
Sbjct: 406 LKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAI 465
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
L+++M + RI P+ + +A+I I +A+ F S+ + + Y+ +I
Sbjct: 466 ELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGY 525
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
K G EA +++ + + G +P T N ++ ++G+ EA ++ T K G+
Sbjct: 526 AKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGL 581
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/498 (21%), Positives = 210/498 (42%), Gaps = 48/498 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L + S YN+++ L + D+ + + ++ + +T ILI G+CR + +
Sbjct: 197 LNLQVSIATYNSLLYNLRHT---DIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQD 253
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ +++ G + P+V ++ L+ GFC V +M + + P+ + L+H
Sbjct: 254 AVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLH 313
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ C+ SM EA M + G P
Sbjct: 314 GL--CVA--------------------------------GSM-EEALEFTNDMENHGVEP 338
Query: 184 ESSTFD-----YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+ T++ + + L++G ++ + G+ P TY +L+ + G E
Sbjct: 339 DIVTYNILANGFRILGLISG-----AWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEE 393
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + L ++ +Y +++ CK +D A + EM + P+L+T++ LI
Sbjct: 394 SFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIH 453
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G CK V + EL + P+ F +++I L +A + + V
Sbjct: 454 GLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAE 513
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
I YNI+I +G++ ++R ++++ ISP I TFN+LI FC+ K+ +A K
Sbjct: 514 EIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLL 573
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
++ GL P + +Y+ L+ + G ME P T ++++ L ++
Sbjct: 574 DTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKE 633
Query: 479 GRFEEAHDIVKTSKERGI 496
GR E+ ++K RG+
Sbjct: 634 GRLHESVQLLKYMYARGL 651
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 240/496 (48%), Gaps = 1/496 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS YN ++ L + ++ A +M D P+ TYNILI +C+ G ++ A
Sbjct: 373 GCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAA-PNLTTYNILIDMLCKAGELEAA 431
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ M+ G PN+ T I+ID C A+++ E + + + P+ T SL+ G
Sbjct: 432 LKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDG 491
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R A+ L + ++ + + +V +L+ + I ++M RG P+
Sbjct: 492 LGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPD 551
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + C+ ++ + + + +G+ P +Y +L+ L KAG E +
Sbjct: 552 LMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFY 611
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L +V +YN VID FCK +D+A ++ EM+ + + P +VT+ +++ G K
Sbjct: 612 EMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKID 671
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L G + ++S+ID + R ++A L E+++ G+ PN+ T+N
Sbjct: 672 RLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWN 731
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ +L ++ + FQ M+ + SP+ T++ +I C + K KA + M
Sbjct: 732 CLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQ 791
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL+P+N +Y+ +I L K+G EA+ F + +G PDS N ++E L + +A
Sbjct: 792 GLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDA 851
Query: 485 HDIVKTSKERGISFKS 500
+ + + ++ +G S
Sbjct: 852 YIVFEETRLKGCRVNS 867
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/534 (23%), Positives = 234/534 (43%), Gaps = 46/534 (8%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y +I AL +N D F QM + + + L+ R G +D AL L
Sbjct: 201 PAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSL 260
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M+ + ++ Y + ID F +V ++ MK + + P++ T +L+ + +
Sbjct: 261 LDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCK 320
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC----NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+A EL E L + + C NT++ + EA ++L + +G +P
Sbjct: 321 ARRLDEAVELF----EELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIP 376
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ +TCL + E I D +++ P +TY +L++ L KAG ++E +
Sbjct: 377 SVIAYNCILTCLGRKGKVEEALRIHDE-MRQDAAPNLTTYNILIDMLCKAG-ELEAALKV 434
Query: 244 NHVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEI----------------C-------- 278
K+ L N+ + N++ID CK +D A I C
Sbjct: 435 QDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGR 494
Query: 279 -----------REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+M D D PN+V + +LI K ++ ++ G PD
Sbjct: 495 RGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLML 554
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
NS +DC+ +A E E+ G+ P+ +Y+ILI L G + +LF +M+
Sbjct: 555 LNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMK 614
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ D+ +N +I FC+ K++KA + M T GL+P +Y +++ L K R D
Sbjct: 615 EQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLD 674
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
EA F + G + + + +++ + GR +EA+ I++ ++G++ S+
Sbjct: 675 EAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSY 728
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/503 (23%), Positives = 225/503 (44%), Gaps = 13/503 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G S + ++ + VKS+ + A+ + M + +P Y LI +
Sbjct: 159 MSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANR 218
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
D L L QM+ +GY NV+ +T L+ F R+ +L+ MK N T
Sbjct: 219 PDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMK-----SNSFTADL 273
Query: 121 LVHGV-FRCLDPHKAFELLIRFMEREPLTQKLVCN-----TLLYRLSNNSMASEAAAILR 174
+++ V C ++ +F E Q LV + TL+ L EA +
Sbjct: 274 VLYNVCIDCFGKVGKVDMAWKFF-HEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFE 332
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
++ +P ++ + + +E +L+ ++G P Y ++ L + G
Sbjct: 333 ELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKG 392
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
+ E R + + +D N+ +YN++ID CK ++ A ++ M++ + PN++T N
Sbjct: 393 KVEEALRIHDEMRQDA-APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVN 451
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
+I CK ++ + + + L PD TF S+ID L R R +DA +M++
Sbjct: 452 IMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDS 511
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
PN + Y LI++ G +++++M SPD+ N+ + + ++EK
Sbjct: 512 DQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKG 571
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
F + GL PD SYS LI L+K+G E + F M++ G + D N +++
Sbjct: 572 RALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDG 631
Query: 475 LVQQGRFEEAHDIVKTSKERGIS 497
+ G+ ++A+ +++ K +G+
Sbjct: 632 FCKSGKVDKAYQLLEEMKTKGLQ 654
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 159/396 (40%), Gaps = 48/396 (12%)
Query: 114 NEATVRSLVHGVFRCL-DPHKAFELLIRFMEREPLTQKLVC----NTLLYRLSNNSMASE 168
+E + ++ GV + L D + AF+ R++ER+ TQ+ C N L ++
Sbjct: 95 DEMSQPEVIVGVMKRLKDVNVAFQYF-RWVERK--TQQAHCPEVYNAFLMVMARTRNLDY 151
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
IL +M G+ + V V L E G+++ K +P FS Y L+
Sbjct: 152 LEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIG 211
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
AL A R D + +M++
Sbjct: 212 ALSAANRP-----------------------------------DPMLTLFHQMQEIGYEA 236
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
N+ F TL+ ++ + LL + F D +N IDC + + + A
Sbjct: 237 NVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFF 296
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
EM G+ P+ +TY LI LC + ++ LF+++ +R P +Y +N +I +
Sbjct: 297 HEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSA 356
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
K ++A G P +Y+ ++ L + G+ +EA + M Q+ P+ T
Sbjct: 357 GKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAA-PNLTTY 415
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGISFKSFPGL 504
N++++ L + G E A + T KE G+ FP +
Sbjct: 416 NILIDMLCKAGELEAALKVQDTMKEAGL----FPNI 447
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 105/221 (47%), Gaps = 1/221 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ + +Y+++ID K ID AYL +++ P+ +T+N L+ + + +DE
Sbjct: 686 IGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDE 745
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + M+ L +PN TY+I+I+G C ++ + F + M+++ + PN T +++
Sbjct: 746 AQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIA 805
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + + +A L RF + N ++ LS+ + A +A + + +G
Sbjct: 806 GLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRV 865
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYL 224
S T + L D E I+ ++ K + +T L
Sbjct: 866 NSKTCVVLLDALHKA-DCLEQAAIVGAVLREMAKSQHATRL 905
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 237/493 (48%), Gaps = 16/493 (3%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P+ Y +I ++ +DL + + + D T+ L+ G+C +A+
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 66 RLV-KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE---RNVCPNEATVRSL 121
+V ++M LG P+V++Y L+ G C+ R E +L +M + P+ + ++
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207
Query: 122 VHGVFR----------CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAA 171
++G F+ +D KA E+L ++ + + N++L+ ++ EA
Sbjct: 208 LNGFFKEGIQTKLTAQAMD--KAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 265
Query: 172 ILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY 231
L+KM G P T+ + L E I D+ KRG++P +TY L++
Sbjct: 266 TLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHC 325
Query: 232 KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
K GR +E ++ + + + + ++ +YN +ID C MD AT++ M + P++V
Sbjct: 326 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 385
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
T+ TLI+G+C+ + + L ++ G P+ T+N ++ L R A + +
Sbjct: 386 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 445
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
+ G TYNI++ LC +LR+FQ + + + TFN +I + + ++
Sbjct: 446 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRM 505
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
++A+ F + GL PD +YS + + LI+ G +E FLSME+NGC+ DS N I
Sbjct: 506 DEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSI 565
Query: 472 LETLVQQGRFEEA 484
+ L+Q+G A
Sbjct: 566 VRKLLQRGDITRA 578
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 220/463 (47%), Gaps = 14/463 (3%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM---EGLGYAPN 79
S+++D+ + ++ C PD F+YN L+ G+C EAL L+ M G G P+
Sbjct: 144 SDAMDIVLRRMTELG---CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPD 200
Query: 80 VYTYTILIDGF--------CNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
V +Y +++GF A+ + + VL M + V P+ T S++HG P
Sbjct: 201 VVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 260
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
+A L + + ++L+ L N ++EA I M RG P+ +T+
Sbjct: 261 KEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTL 320
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ + E+ + D ++ GVKP TY L++ AG+ E + L + +
Sbjct: 321 LQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGV 380
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
++ +Y +I+ +C+V+ MD A + +EM ++PN++T+N ++ G +E
Sbjct: 381 KPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 440
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
L V + + G + + T+N ++ LC+ + ++AL + + T T+NI+I +L
Sbjct: 441 LYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 500
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
G + + LF A+ + PD+ T++ + ++ +E+ + F SM G D+
Sbjct: 501 KCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSR 560
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
+++++ L++ G A +++ + ++ T++ +LE+
Sbjct: 561 MLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLES 603
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 150/377 (39%), Gaps = 39/377 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN+++ S A ++M D +P+ TY+ L++ +C+ G EA
Sbjct: 239 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEA 298
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ M G P++ TY L+ G C RV E ++ ++M V P+ T +L+ G
Sbjct: 299 RKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDG 358
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
CL EA +L M G P+
Sbjct: 359 C--CL---------------------------------AGKMDEATKLLASMVSVGVKPD 383
Query: 185 SSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
T+ + C V+ +D + + + GV P TY ++++ L+ R
Sbjct: 384 IVTYGTLINGYCRVSRMD--DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 441
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ K +++YN+++ CK N+ D A + + + D+ TFN +I K
Sbjct: 442 YVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 501
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + ++L G PD T++ M + L E+ D M E G ++
Sbjct: 502 CGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRM 561
Query: 363 YNILIRSLCAIGDVARS 379
N ++R L GD+ R+
Sbjct: 562 LNSIVRKLLQRGDITRA 578
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 245/500 (49%), Gaps = 11/500 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQ-QMSVDQCKPDRFTYNILIHGICRIGVVD 62
LG+ P+ YN VID L KS + A L+F+ +M + P TY +LI G+ ++ + +
Sbjct: 284 LGVFPNVVTYNNVIDGLFKSGRFEEA-LRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFE 342
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA ++ +M +G+APN + LIDG+C + E RV + M + + PN T +L+
Sbjct: 343 EANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLL 402
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G R +A ++L+ + VC+ +++RL S A I+ K+ G +
Sbjct: 403 QGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLS-GNI 461
Query: 183 PESSTFDYTVTCLVTGLDLNETCG-ILDTFIK----RGVKPRFSTYLLLMEALYKAGRDV 237
S D +T LV GL E ++ + K +G+ T L+ L + G
Sbjct: 462 RVS---DSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNME 518
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E L + + L+ + SYN +I CK ++ A ++ EM ++ P+ T+N L+
Sbjct: 519 EVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLM 578
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G ++ LL E GF P+ +T+ +++ C+A R EDA+ + V
Sbjct: 579 KGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVE 638
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
+++ YNILI + C IG+V + +L M++ I P T+++LI C + ++++A++
Sbjct: 639 LSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEI 698
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F M GL P+ F Y+ALI K G+ D L M NG P+ T ++++ +
Sbjct: 699 FEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCK 758
Query: 478 QGRFEEAHDIVKTSKERGIS 497
G +EA +++ GI+
Sbjct: 759 LGNMKEARELLNEMIRNGIA 778
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 211/473 (44%), Gaps = 36/473 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++PS Y +I L+K + A +M P+ +N LI G CR G + EAL
Sbjct: 321 VNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEAL 380
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL-------------------EIM 106
R+ +M G PN T+ L+ GFC + ++ + +VL +
Sbjct: 381 RVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRL 440
Query: 107 KER----------------NVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQK 150
ER N+ +++ + LV G+ +C +A EL + + L
Sbjct: 441 MERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAAN 500
Query: 151 LVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
V N LL+ L E +L++M ++G L + +++ + + E + +
Sbjct: 501 TVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKE 560
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+++ +P TY LM+ L G+ + R L+ + V NV +Y ++++ +CK +
Sbjct: 561 EMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKAD 620
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
++ A + + + + + V +N LI+ +C+ V + +L + G P T++
Sbjct: 621 RIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYS 680
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
S+I +C R ++A + EM G+ PN Y LI C +G + + +M ++
Sbjct: 681 SLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSN 740
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
I P+ T+ +I +C++ +++A + M+ G+ PD +Y+AL K K
Sbjct: 741 GIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCK 793
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 205/462 (44%), Gaps = 44/462 (9%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
G AP+V+T+T I+ FC RV + + M+ V PN T +++ G+F+
Sbjct: 250 GVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFK----SGR 305
Query: 135 FELLIRF---MEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
FE +RF M R + +V L+ L M EA +L +M G+ P F+
Sbjct: 306 FEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNA 365
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ D+ E + D +G+KP F T+ L++ ++ + + ++ L ++
Sbjct: 366 LIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSG 425
Query: 251 LVSNVNSYNMVID-----------------------------------CFCKVNMMDRAT 275
L N++ + VI CK A
Sbjct: 426 LSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAI 485
Query: 276 EICREMRD-RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
E+ ++ + +A N VT N L+ G C+ + + E+L +LE G D+ ++N++I
Sbjct: 486 ELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFG 545
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
C+ + E+A EMV+ P+T TYN L++ L +G + RL + + P+
Sbjct: 546 CCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPN 605
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+YT+ L++ +C+ ++IE A K F ++ + + Y+ LI A + G EA +
Sbjct: 606 VYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRD 665
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+M+ G P T + ++ + GR +EA +I + + G+
Sbjct: 666 AMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGL 707
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 205/440 (46%), Gaps = 36/440 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G +P+ ++NA+ID + + A +M++ KP+ T+N L+ G CR +++
Sbjct: 354 MGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQ 413
Query: 64 ALRLVKQM--EGLGYAPNVYTYTI---------------------------------LID 88
A +++ + GL +V +Y I L+
Sbjct: 414 AEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVV 473
Query: 89 GFCNAKRVAEVFRV-LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPL 147
G C + +E + ++ + + N T +L+HG+ + + FE+L + +E+ L
Sbjct: 474 GLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLL 533
Query: 148 TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGI 207
++ NTL++ EA + +M + + P++ T+++ + L +++ +
Sbjct: 534 LDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRL 593
Query: 208 LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
L + G P TY LL+E KA R + ++ ++ +++ + YN++I +C+
Sbjct: 594 LHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCR 653
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+ + A ++ M+ R I P T+++LI G C V + +E+ + G P+ F
Sbjct: 654 IGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFC 713
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+ ++I C+ + + L EM G+ PN ITY I+I C +G++ + L +M
Sbjct: 714 YTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMI 773
Query: 388 ADRISPDIYTFNALIQSFCR 407
+ I+PD T+NAL + +C+
Sbjct: 774 RNGIAPDTVTYNALQKGYCK 793
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 181/406 (44%), Gaps = 37/406 (9%)
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
F+CL AF++ + F +R CN LL L + ++ + + +G P+
Sbjct: 197 FKCLGSRCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVF-DLACQGVAPDV 255
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
TF + G + + + GV P TY +++ L+K+GR E R+ +
Sbjct: 256 FTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDR 315
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + ++ +V +Y ++I K+ M + A E+ EM APN V FN LI G+C+ +
Sbjct: 316 MVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGD 375
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT----- 360
+ + + + G KP+ TFN+++ CR+++ E A L ++ G+ N
Sbjct: 376 MGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSY 435
Query: 361 ---------------------ITYNI---------LIRSLCAIGDVARSLRLFQKMQADR 390
++ NI L+ LC + ++ L+ K+ A +
Sbjct: 436 VIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVK 495
Query: 391 -ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
++ + T NAL+ C +E+ + ML GL D SY+ LI K G+ +EA
Sbjct: 496 GLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEA 555
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ M Q PD+YT N +++ L G+ ++ H ++ +KE G
Sbjct: 556 FKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYG 601
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 142/326 (43%), Gaps = 37/326 (11%)
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
I F KRGV P T LL+ +L KA ++ + + + +V ++ I+ FC
Sbjct: 208 IFVMFSKRGVFPCLKTCNLLLSSLVKAN-ELHKSYEVFDLACQGVAPDVFTFTTAINAFC 266
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K + A ++ +M + PN+VT+N +I G K + ++ P
Sbjct: 267 KGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVV 326
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+ +I L + FE+A + L EM G PN + +N LI C GD+ +LR+ +M
Sbjct: 327 TYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEM 386
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL-------------------- 426
+ P+ TFN L+Q FCR N++E+AE+ +L+ GL
Sbjct: 387 AMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGF 446
Query: 427 ---------------RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ-NGCNPDSYTSNL 470
R + + L+ L K EA + + + G ++ TSN
Sbjct: 447 VSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNA 506
Query: 471 ILETLVQQGRFEEAHDIVKTSKERGI 496
+L L ++G EE +++K E+G+
Sbjct: 507 LLHGLCERGNMEEVFEVLKQMLEKGL 532
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/582 (23%), Positives = 253/582 (43%), Gaps = 90/582 (15%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQM---------------SVDQCK------ 42
G PS YNA+I ++++ +D AYL ++M + CK
Sbjct: 205 FGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCRE 264
Query: 43 ------------PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGF 90
PD YN ++ G+C + +EA+ ++ +M PNV TY IL+ G
Sbjct: 265 AFDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGC 324
Query: 91 CNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFM-------- 142
++ R+L +M PN SL+H + D A++L + +
Sbjct: 325 LRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGY 384
Query: 143 -------------EREP-----------LTQKLVCNTLLYRLSNNSMA---------SEA 169
E +P ++ L +L +++ ++ A +A
Sbjct: 385 LVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQA 444
Query: 170 AAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEA 229
I+ +M +G++P+ ST+ + L + + + + + G+ P TY +L+++
Sbjct: 445 FKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDS 504
Query: 230 LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
KAG + ++ + + NV +Y +I + K M A E+ M PN
Sbjct: 505 FCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPN 564
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVML--------LECGFK--------PDKFTFNSMID 333
+VT+ LI GHCK ++ K ++ + ++ FK P+ T+ +++D
Sbjct: 565 VVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVD 624
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
LC+A+R ++A + L M+ G PN I Y+ +I C IG + + +F KM SP
Sbjct: 625 GLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSP 684
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
++YT+++ I + N+++ K ML P+ Y+ ++ L K G+ DEA +
Sbjct: 685 NLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLM 744
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
L ME+ GCNP+ T +++ + G+ E+ ++ + +G
Sbjct: 745 LKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKG 786
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 121/497 (24%), Positives = 215/497 (43%), Gaps = 24/497 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICR------I 58
G P+ ++N++I A KS AY F++M C+P YNI I +C
Sbjct: 344 GCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSS 403
Query: 59 GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
++D + +M LG N + C A + + F+++ M + P+++T
Sbjct: 404 DILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTY 463
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMG 177
++ + KAF L M+R + + T+L + +A +M
Sbjct: 464 SKVIGFLCDASKVEKAFSLFEE-MKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEML 522
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-- 235
+G P T+ + + + + + + G KP TY L++ KAG+
Sbjct: 523 HKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIE 582
Query: 236 -----------DVEG---DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
D+E D+Y + NV +Y ++D CK N + A E+ M
Sbjct: 583 KACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTM 642
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
PN + ++ +I G CK ++ +E+ + E G+ P+ +T++S IDCL + +R
Sbjct: 643 LAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRL 702
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+ L LS+M+E PN + Y ++ LC IG + +L KM+ +P++ T+ A+
Sbjct: 703 DLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAM 762
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I F + KIE+ + F M + G P+ +Y LI +G DEA + M+Q
Sbjct: 763 IDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYW 822
Query: 462 NPDSYTSNLILETLVQQ 478
+ I+E Q+
Sbjct: 823 PKHILSHRKIIEGFSQE 839
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/543 (22%), Positives = 230/543 (42%), Gaps = 57/543 (10%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P T YN ++ L +++ + A +M C P+ TY IL+ G R G + R+
Sbjct: 277 PDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRI 336
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE--------------RNVCP 113
+ M G PN + LI +C ++ + +++ + M + +VC
Sbjct: 337 LSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCS 396
Query: 114 NE----ATVRSLVHGVF-------------------RCL----DPHKAFELLIRFMEREP 146
NE + + LV + RCL +AF+++ M +
Sbjct: 397 NEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGF 456
Query: 147 LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
+ + ++ L + S +A ++ +M G +P T+ + + +
Sbjct: 457 VPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARK 516
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
D + +G P TY L+ A KA + D + + NV +Y +ID C
Sbjct: 517 WFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHC 576
Query: 267 KVNMMDRATEICREMR------DRDI----------APNLVTFNTLISGHCKDAEVHKTR 310
K +++A +I MR D D PN++T+ L+ G CK V +
Sbjct: 577 KAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAH 636
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
ELL +L G +P++ ++++ID C+ + +DA + ++M E G PN TY+ I L
Sbjct: 637 ELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCL 696
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
+ L++ KM + +P++ + ++ C++ K ++A K M G P+
Sbjct: 697 FKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNV 756
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+Y+A+I KSG+ ++ + F M GC P+ T +++ G +EA+ ++
Sbjct: 757 VTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDE 816
Query: 491 SKE 493
K+
Sbjct: 817 MKQ 819
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 114/496 (22%), Positives = 212/496 (42%), Gaps = 51/496 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y+ VI L ++ ++ A+ F++M + P +TY ILI C+ G++ +A
Sbjct: 455 GFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQA 514
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G PNV TYT LI + AK++ + E+M PN T +L+ G
Sbjct: 515 RKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDG 574
Query: 125 VFRCLDPHKAFELLIRF---MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ KA ++ R +E + + ++L +N+
Sbjct: 575 HCKAGQIEKACQIYARMRGDIESSDMDK-------YFKLDHNNCEG-------------- 613
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P T+ V L + E +LDT + G +P Y +++ K G+ +
Sbjct: 614 -PNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQE 672
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + N+ +Y+ IDC K N +D ++ +M + PN+V + ++ G C
Sbjct: 673 VFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLC 732
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + + +L++ + E G P+ T+ +MID ++ + E L+ +M G PN I
Sbjct: 733 KIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFI 792
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR--------MNKIEK 413
TY +LI C+ G + + +L +M+ I + +I+ F + ++++ +
Sbjct: 793 TYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSE 852
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL--- 470
E P + Y LI IK+GR + A +E+ +P SN
Sbjct: 853 NESV----------PVDSLYRILIDNYIKAGRLEVALDL---LEEISSSPSHAVSNKYLY 899
Query: 471 --ILETLVQQGRFEEA 484
++E L + ++A
Sbjct: 900 ASLIENLSHASKVDKA 915
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 207/465 (44%), Gaps = 20/465 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI PS Y +ID+ K+ I A F +M C P+ TY LIH + + A
Sbjct: 490 GIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVA 549
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK--------------ERN 110
L + M G PNV TYT LIDG C A ++ + ++ M+ + N
Sbjct: 550 DELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHN 609
Query: 111 VC--PNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE 168
C PN T +LV G+ + +A ELL + ++V + ++ +
Sbjct: 610 NCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQD 669
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A + KM +RGY P T+ + CL L+ +L ++ P Y +++
Sbjct: 670 AQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVD 729
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
L K G+ E + + + + NV +Y +ID F K +++ E+ R+M + AP
Sbjct: 730 GLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAP 789
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
N +T+ LI+ C + + + +LL + + + + +I+ + F ++ L
Sbjct: 790 NFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGF--SQEFITSIGLL 847
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD--RISPDIYTFNALIQSFC 406
E+ E P Y ILI + G + +L L +++ + + Y + +LI++
Sbjct: 848 DELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLS 907
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
+K++KA + + SM++ + P+ LIK LIK ++ EA Q
Sbjct: 908 HASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQ 952
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/492 (26%), Positives = 224/492 (45%), Gaps = 35/492 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP Y+ +I+A K D A +M C + TYN+LI G+CR G V+EA
Sbjct: 239 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 298
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
K ME G P+ +TY LI+G C ++R E +L+ M + PN +L+ G
Sbjct: 299 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDG 358
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R A EA ++++M G P
Sbjct: 359 FMR-----------------------------------EGNADEAFKMIKEMVAAGVQPN 383
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+D V L ++ +L ++ +P TY L++E ++ + R L+
Sbjct: 384 KITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLS 443
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + NV +Y+++I C+ ++A+++ EM + + PN + LISG+C++
Sbjct: 444 EMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREG 503
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V E+ + + PD + +NS+I L + R E++ ++M E G+ PN TY+
Sbjct: 504 NVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYS 563
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI GD+ + +L Q+M + P+ + L++S+ + + IEK F SML
Sbjct: 564 GLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQ 623
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ DN Y LI L SG + A + +E+NG PD + + ++ L + E+A
Sbjct: 624 GVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKA 683
Query: 485 HDIVKTSKERGI 496
I+ ++G+
Sbjct: 684 FGILDEMSKKGV 695
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 205/448 (45%)
Query: 49 NILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
++L+ + G V +A +V M G AP++ L+ A +A +++V E M
Sbjct: 178 DVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVG 237
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE 168
+ P+ T +L+ + + A ++L+ ER + N L+ L + E
Sbjct: 238 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 297
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A + M D G +P+ T+ + L NE +LD +KP Y L++
Sbjct: 298 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 357
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
+ G E + + + + N +Y+ ++ CK+ MDRA+ + ++M P
Sbjct: 358 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 417
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+ +T+N +I GH + LL + G P+ +T++ MI LC++ E A D L
Sbjct: 418 DTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 477
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
EM G+ PN Y LI C G+V+ + +F KM + PD+Y +N+LI ++
Sbjct: 478 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 537
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
++E++ K F M GL P+ F+YS LI +K+G + A+Q M G P+
Sbjct: 538 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 597
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGI 496
+LE+ + E+ K+ ++G+
Sbjct: 598 IDLLESYFKSDDIEKVSSTFKSMLDQGV 625
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/497 (24%), Positives = 227/497 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +T YN +I L +S +++ A+ + M PD FTY LI+G+C+ +EA
Sbjct: 274 GCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEA 333
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M PNV Y LIDGF E F++++ M V PN+ T +LV G
Sbjct: 334 KALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRG 393
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A LL + + + N ++ + +A +L +M + G P
Sbjct: 394 LCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPN 453
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L + + +L+ +G+KP Y L+ + G +
Sbjct: 454 VYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFD 513
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K ++ ++ YN +I KV ++ +T+ +M++R + PN T++ LI G+ K+
Sbjct: 514 KMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNG 573
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ +L+ +L+ G KP+ + +++ ++ E M++ GV + Y
Sbjct: 574 DLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYG 633
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
ILI +L + G++ + R+ ++ + PD++ +++LI C+ EKA M
Sbjct: 634 ILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKK 693
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ P+ Y+ALI L KSG A+ F S+ G P+ T +++ + G A
Sbjct: 694 GVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 753
Query: 485 HDIVKTSKERGISFKSF 501
+ GI+ +F
Sbjct: 754 FYLYNEMLATGITPDAF 770
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 200/477 (41%), Gaps = 36/477 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP+ Y+ +I L +S + A ++M+ KP+ F Y LI G CR G V A
Sbjct: 449 GISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 508
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M + P++Y Y LI G RV E + M+ER + PNE T L+HG
Sbjct: 509 CEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHG 568
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D A +L+ R ++ ++ LL + + ++ + M D+G + +
Sbjct: 569 YLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLD 628
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + L + ++ +L K G P Y L+ L K + L+
Sbjct: 629 NRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILD 688
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K + N+ YN +ID CK + A + + + + PN VT+ +LI G CK
Sbjct: 689 EMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVG 748
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ L +L G PD F Y+
Sbjct: 749 DISNAFYLYNEMLATGITPDAF-----------------------------------VYS 773
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+L + GD+ +++ L ++M R I +FN L+ FC+ K+++ K ++
Sbjct: 774 VLTTGCSSAGDLEQAMFLIEEMFL-RGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGR 832
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
GL P+ + +I L ++G+ E F+ ++Q + + + ++ QG+
Sbjct: 833 GLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKI 889
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 159/332 (47%), Gaps = 1/332 (0%)
Query: 170 AAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEA 229
A+I R + D G+ + D V + + ++ RG+ P L++
Sbjct: 160 ASIHRALSDSGHR-SPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKD 218
Query: 230 LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
L +A + + + +V +Y+ +I+ +CKV D A ++ EMR+R N
Sbjct: 219 LLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLN 278
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
VT+N LI+G C+ V + + + G PD FT+ ++I+ LC++ R +A L
Sbjct: 279 TVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLD 338
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
EM + PN + Y LI G+ + ++ ++M A + P+ T++ L++ C+M
Sbjct: 339 EMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMG 398
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
++++A M+ RPD +Y+ +I+ + +A + ME G +P+ YT +
Sbjct: 399 QMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYS 458
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+++ L Q G E+A D+++ +G+ +F
Sbjct: 459 IMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 490
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/499 (21%), Positives = 202/499 (40%), Gaps = 54/499 (10%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN++I L K ++ + F QM P+ FTY+ LIHG + G ++ A +L
Sbjct: 522 PDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQL 581
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
V++M G PN Y L++ + + + +V + M ++ V + + ++G+
Sbjct: 582 VQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV-----MLDNRIYGI-- 634
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
L++ LS++ A +L + G +P+
Sbjct: 635 ----------------------------LIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHV 666
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ ++ L D + GILD K+GV P Y L++ L K+G N +
Sbjct: 667 YSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSIL 726
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
LV N +Y +ID CKV + A + EM I P+ ++ L +G ++
Sbjct: 727 AKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLE 786
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ L+ + G +FN+++D C+ + ++ L L ++ G+ PN +T +I
Sbjct: 787 QAMFLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENII 845
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL------------------IQSFCRMN 409
L G ++ +F ++Q F++L I+ C+
Sbjct: 846 SGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEG 905
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
++KA ++ SY A++ L + G+ EA M++ G P
Sbjct: 906 NLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCL 965
Query: 470 LILETLVQQGRFEEAHDIV 488
++L L G +E + ++
Sbjct: 966 ILLTNLHTSGYIQEHNTVL 984
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/498 (24%), Positives = 235/498 (47%), Gaps = 14/498 (2%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P + ++ L K + + QM + PD T NIL++ +C + V E L
Sbjct: 93 TPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLA 152
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++ + GY P++ TYT LI G C R+++ + M++ PN T +L+ G+
Sbjct: 153 VMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLC 212
Query: 127 RCLDPHKAFELLIRFMEREPLTQ------KLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
R + A +L + L + + ++ L + EA + +M +G
Sbjct: 213 RTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQG 272
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P ++ T L E + + + +GV+P T+ +L++ L K G+ +E
Sbjct: 273 MTPTVISY--------TSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAK 324
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L + + +V N+ +YN +I+ FC V ++ A E+ M + P+++ + LI+G+
Sbjct: 325 DLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGY 384
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK ++V + +L +L+ G +PD T+ +++ L + + DA M +G+P +
Sbjct: 385 CKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDL 444
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
Y I + LC G + ++ LF K+++ I DI FN LI C+ K+E A + F
Sbjct: 445 YIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEK 504
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+ L+PD +Y+ +I + G+ +A F ME+NGC PD T ++ + +
Sbjct: 505 LPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKK 564
Query: 481 FEEAHDIVKTSKERGISF 498
E+ +++ +R +S
Sbjct: 565 LEKVVELLHMMVQRDVSL 582
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 174/407 (42%), Gaps = 49/407 (12%)
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+AF+ M P LL L+ S+ + +M G P+ T + +
Sbjct: 79 QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKP----------------RFS--------------- 221
CL + E ++ ++RG P R S
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198
Query: 222 ----TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVN------SYNMVIDCFCKVNMM 271
TY LM+ L + G + + D + +N SY+++ID CK
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
D A ++ EM+ + + P ++++ +L+ + + L ++ G +P+ TFN +
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLMW--------EEAKRLFNEMVNQGVQPNVVTFNVL 310
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
ID LC+ + +A D L M++ G+ PN +TYN LI C +GD+ + LF M +
Sbjct: 311 IDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGC 370
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
PD+ + LI +C+ +K+E+A K + ML +G RPD +Y AL+ L + G+ +AK+
Sbjct: 371 EPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKK 430
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
F M+ G D Y + L L + G EA ++ K I
Sbjct: 431 LFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKL 477
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 175/432 (40%), Gaps = 49/432 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y +I L + I A L F +M C P+ TY L+ G+CR G + A
Sbjct: 161 GYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIA 220
Query: 65 LRLVKQM------EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
L+L ++M G+ + P V +Y+I+ID C +R E + E MK + + P +
Sbjct: 221 LKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISY 280
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
SL+ +A L + + + N L+ L EA +L M
Sbjct: 281 TSLMW--------EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQ 332
Query: 179 RGYLPESSTFDYTVT--CLVTGLD---------------------------------LNE 203
RG +P T++ + CLV L+ + E
Sbjct: 333 RGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEE 392
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
+ + ++ G +P TY L+ L++ G+ + + + + ++ Y + ++
Sbjct: 393 AMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLN 452
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
CK + A E+ +++ +I ++ FN LI G CK ++ EL L + +P
Sbjct: 453 GLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQP 512
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D T+N MI CR + A +M + G P+ ITY LIR + + + L
Sbjct: 513 DVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELL 572
Query: 384 QKMQADRISPDI 395
M +S D+
Sbjct: 573 HMMVQRDVSLDV 584
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 2/177 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P + Y A++ L + + A F M V D + Y I ++G+C+ G + E
Sbjct: 403 VGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFE 462
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L +++ ++ + LIDG C A ++ + + E + + + P+ T ++H
Sbjct: 463 AMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIH 522
Query: 124 GVFRCLDPHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
R KA +L + ME+ T K+ TL+ + + +L M R
Sbjct: 523 EFCRGGQVVKA-NILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQR 578
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/495 (26%), Positives = 222/495 (44%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
S S YN + L + ID F+ M D +P+ ++N +++ C+IG V A
Sbjct: 152 SLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKA 211
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+ G+ + +TYT LI G+C + + ++V EIM + NE + +L+HG
Sbjct: 212 YFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFC 271
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+A EL + E L+ +EA +M + G P
Sbjct: 272 EVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVY 331
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + ++E +L T +++G+ + L++ K G + L+ +
Sbjct: 332 TYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSM 391
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+++ N +YN +I FC+ MDRA + +M + ++PNLVT+NTLI G CK V
Sbjct: 392 KLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVV 451
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
L ++++ GF PD+ TF + IDCLC+ + E A + E N Y L
Sbjct: 452 DSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTAL 511
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I C + + LF++M + P+ TFN L+ + K+E A M
Sbjct: 512 IDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDA 571
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+P +Y+ LI+ +++ FD A M +GC P+ T ++ +QGR EA +
Sbjct: 572 KPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEE 631
Query: 487 IVKTSKERGISFKSF 501
+V KE GI SF
Sbjct: 632 MVVKIKEEGILLDSF 646
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 132/547 (24%), Positives = 225/547 (41%), Gaps = 63/547 (11%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y ++I K + + AY F+ M + C + +Y LIHG C +G +DEAL L QM+
Sbjct: 228 YTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMK 287
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G P+V TYT+L+ FC + E + E M E + PN T L+ +
Sbjct: 288 EDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMD 347
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+ E+L +E+ ++ + N L+ M +A +L M P S T++ +
Sbjct: 348 EGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELI 407
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF-KDRL 251
++ +L+ + + P TY L+ L KA R V+ L+H+ KD
Sbjct: 408 CGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKA-RVVDSAWRLHHLMIKDGF 466
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
V + ++ IDC CK+ +++A ++ ++++ N + LI G+CK +
Sbjct: 467 VPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHL 526
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
L +L G P+ TFN ++D L + + EDA+ + M ++ P TY ILI +
Sbjct: 527 LFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEIL 586
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK--------------- 416
D R+ +M + P++ T+ A I+++CR ++ +AE+
Sbjct: 587 RESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSF 646
Query: 417 --------------------AFFSMLTLGLRPDNFSYSALIKALI--------------- 441
M G P +YS L+K LI
Sbjct: 647 IYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNS 706
Query: 442 -----------KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
K F+ F M + GC P+ T + +++ L + A +
Sbjct: 707 TNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNH 766
Query: 491 SKERGIS 497
KE GIS
Sbjct: 767 MKESGIS 773
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 190/473 (40%), Gaps = 48/473 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P R + A ID L K ++ A+ F+ + + + F Y LI G C+ +A
Sbjct: 465 GFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDA 524
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L K+M G PN T+ +L+DG +V + ++++M + + P T L+
Sbjct: 525 HLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEE 584
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R D +A L + + + + EA ++ K+ + G L +
Sbjct: 585 ILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLD 644
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S +D V L+ G+L G +P TY +L++ L + EG
Sbjct: 645 SFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEG----- 699
Query: 245 HVFKDRLVSNVNSYNMVIDC--FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ ++NS N+ +D K+ + T + +M ++ PN+ T++ LI G CK
Sbjct: 700 ------MGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCK 753
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ L + E G P + NS++ C+ E+AL L M+E+ + +
Sbjct: 754 VEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLES 813
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y +L+ L G+ EKAE+ F S+L
Sbjct: 814 YKLLVCGLFEQGNQ-----------------------------------EKAEEIFRSLL 838
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ G D + L+ L++ G DE Q ME+ GC S T ++ + L
Sbjct: 839 SCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQEL 891
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 95/191 (49%), Gaps = 2/191 (1%)
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL-SEMVEWGVPPNTITYNI 365
H+ R +L +L F ++N + L R D L+CL +M+ GV PN I++N
Sbjct: 137 HEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLI-DELNCLFKDMLNDGVEPNLISFNT 195
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
++ + C IG+V + F + D +T+ +LI +C+++++ A K F M G
Sbjct: 196 MVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEG 255
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ SY+ LI + G+ DEA + F M+++GC PD T +++ + G+ EA
Sbjct: 256 CLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEAL 315
Query: 486 DIVKTSKERGI 496
+ E GI
Sbjct: 316 KFFEEMVENGI 326
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/492 (26%), Positives = 224/492 (45%), Gaps = 35/492 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP Y+ +I+A K D A +M C + TYN+LI G+CR G V+EA
Sbjct: 112 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 171
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
K ME G P+ +TY LI+G C ++R E +L+ M + PN +L+ G
Sbjct: 172 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDG 231
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R A EA ++++M G P
Sbjct: 232 FMR-----------------------------------EGNADEAFKMIKEMVAAGVQPN 256
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+D V L ++ +L ++ +P TY L++E ++ + R L+
Sbjct: 257 KITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLS 316
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + NV +Y+++I C+ ++A+++ EM + + PN + LISG+C++
Sbjct: 317 EMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREG 376
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V E+ + + PD + +NS+I L + R E++ ++M E G+ PN TY+
Sbjct: 377 NVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYS 436
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI GD+ + +L Q+M + P+ + L++S+ + + IEK F SML
Sbjct: 437 GLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQ 496
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ DN Y LI L SG + A + +E+NG PD + + ++ L + E+A
Sbjct: 497 GVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKA 556
Query: 485 HDIVKTSKERGI 496
I+ ++G+
Sbjct: 557 FGILDEMSKKGV 568
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 205/448 (45%)
Query: 49 NILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
++L+ + G V +A +V M G AP++ L+ A +A +++V E M
Sbjct: 51 DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVG 110
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE 168
+ P+ T +L+ + + A ++L+ ER + N L+ L + E
Sbjct: 111 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 170
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A + M D G +P+ T+ + L NE +LD +KP Y L++
Sbjct: 171 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 230
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
+ G E + + + + N +Y+ ++ CK+ MDRA+ + ++M P
Sbjct: 231 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 290
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+ +T+N +I GH + LL + G P+ +T++ MI LC++ E A D L
Sbjct: 291 DTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 350
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
EM G+ PN Y LI C G+V+ + +F KM + PD+Y +N+LI ++
Sbjct: 351 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 410
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
++E++ K F M GL P+ F+YS LI +K+G + A+Q M G P+
Sbjct: 411 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 470
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGI 496
+LE+ + E+ K+ ++G+
Sbjct: 471 IDLLESYFKSDDIEKVSSTFKSMLDQGV 498
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/536 (25%), Positives = 232/536 (43%), Gaps = 36/536 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +T YN +I L +S +++ A+ + M PD FTY LI+G+C+ +EA
Sbjct: 147 GCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEA 206
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M PNV Y LIDGF E F++++ M V PN+ T +LV G
Sbjct: 207 KALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRG 266
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A LL + + + N ++ + +A +L +M + G P
Sbjct: 267 LCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPN 326
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L + + +L+ +G+KP Y L+ + G +
Sbjct: 327 VYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFD 386
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K ++ ++ YN +I KV ++ +T+ +M++R + PN T++ LI G+ K+
Sbjct: 387 KMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNG 446
Query: 305 EVHKTRELLVMLLECGFKPDKF--------------------TFNSMID----------- 333
++ +L+ +L+ G KP+ TF SM+D
Sbjct: 447 DLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYG 506
Query: 334 ----CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
L + E A LSE+ + G P+ Y+ LI LC D ++ + +M
Sbjct: 507 ILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKK 566
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ P+I +NALI C+ I A F S+L GL P+ +Y++LI K G A
Sbjct: 567 GVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 626
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG-ISFKSFPGL 504
+ M G PD++ +++ G E+A +++ RG S SF L
Sbjct: 627 FYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNL 682
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 200/477 (41%), Gaps = 36/477 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP+ Y+ +I L +S + A ++M+ KP+ F Y LI G CR G V A
Sbjct: 322 GISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 381
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M + P++Y Y LI G RV E + M+ER + PNE T L+HG
Sbjct: 382 CEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHG 441
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D A +L+ R ++ ++ LL + + ++ + M D+G + +
Sbjct: 442 YLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLD 501
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + L + ++ +L K G P Y L+ L K + L+
Sbjct: 502 NRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILD 561
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K + N+ YN +ID CK + A + + + + PN VT+ +LI G CK
Sbjct: 562 EMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVG 621
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ L +L G PD F Y+
Sbjct: 622 DISNAFYLYNEMLATGITPDAF-----------------------------------VYS 646
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+L + GD+ +++ L ++M R I +FN L+ FC+ K+++ K ++
Sbjct: 647 VLTTGCSSAGDLEQAMFLIEEMFL-RGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGR 705
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
GL P+ + +I L ++G+ E F+ ++Q + + + ++ QG+
Sbjct: 706 GLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKI 762
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 159/332 (47%), Gaps = 1/332 (0%)
Query: 170 AAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEA 229
A+I R + D G+ + D V + + ++ RG+ P L++
Sbjct: 33 ASIHRALSDSGH-RSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKD 91
Query: 230 LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
L +A + + + +V +Y+ +I+ +CKV D A ++ EMR+R N
Sbjct: 92 LLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLN 151
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
VT+N LI+G C+ V + + + G PD FT+ ++I+ LC++ R +A L
Sbjct: 152 TVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLD 211
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
EM + PN + Y LI G+ + ++ ++M A + P+ T++ L++ C+M
Sbjct: 212 EMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMG 271
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
++++A M+ RPD +Y+ +I+ + +A + ME G +P+ YT +
Sbjct: 272 QMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYS 331
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+++ L Q G E+A D+++ +G+ +F
Sbjct: 332 IMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 363
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 110/492 (22%), Positives = 207/492 (42%), Gaps = 61/492 (12%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN++I L K ++ + F QM P+ FTY+ LIHG + G ++ A +L
Sbjct: 395 PDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQL 454
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
V++M G PN Y L++ + + + +V + M ++ V + + ++G+
Sbjct: 455 VQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV-----MLDNRIYGI-- 507
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
L++ LS++ A +L ++ G +P+
Sbjct: 508 ----------------------------LIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHV 539
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ ++ L D + GILD K+GV P Y L++ L K+G N +
Sbjct: 540 YSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSIL 599
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
LV N +Y +ID CKV + A + EM I P+ ++ L +G ++
Sbjct: 600 AKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLE 659
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ L+ + G +FN+++D C+ + ++ L L ++ G+ PN +T +I
Sbjct: 660 QAMFLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENII 718
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
L G ++ +F ++Q F++L F M+ G
Sbjct: 719 SGLSEAGKLSEVHTIFVELQQKTSESAARHFSSL----------------FMDMINQGKI 762
Query: 428 PDNFSYSALIKALIKSGRFDEA---KQTFLSMEQN-GCNPDSYTSNLILETLVQQGRFEE 483
P + +I+ K G D+A + ++ GC+ SY + I++ L ++G+ E
Sbjct: 763 PLDV-VDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCS--SYLA--IVDNLCRKGKLSE 817
Query: 484 AHDIVKTSKERG 495
A +++K +RG
Sbjct: 818 ALNLLKEMDKRG 829
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/527 (25%), Positives = 232/527 (44%), Gaps = 34/527 (6%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G++PS +YNA+I+++ K +D A F M P+ TY+ILI C+ G +D
Sbjct: 349 FGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDV 408
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL + +M +G VY Y+ LI G C ++ + + M + PN SL+
Sbjct: 409 ALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLIS 468
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + + H AF L + L+ L + + +EA + +M + +P
Sbjct: 469 GYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIP 528
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + + +LD +++G+ P TY L+ L GR E ++
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + ++ N ++ ++ +CK +D A + CREM R +A +LV ++ LI G +
Sbjct: 589 NDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQ 648
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ +LL + + G +PD + +MID +A + A MV G PN +TY
Sbjct: 649 QDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTY 708
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISP------------------------------ 393
LI LC IG + ++ L ++M A P
Sbjct: 709 TALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE 768
Query: 394 ----DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ T+N LI+ FC++ +I++A + +M+ G+ PD SYS +I + G EA
Sbjct: 769 GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEA 828
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ + SM G NPD+ N ++ G +A ++ RG+
Sbjct: 829 IKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGV 875
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 118/492 (23%), Positives = 225/492 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P R + V++ L++ +A F ++ +PD + Y ++ +C + A
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRA 234
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +ME G +V TY + I G C +RV E + ++ + + + T +LV G
Sbjct: 235 REVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLG 294
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + E++ +E + + + L+ L A ++ K+ G P
Sbjct: 295 LCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPS 354
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + + L+E + + +G+ P TY +L+++ K G+ +L
Sbjct: 355 LFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLG 414
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + + V Y+ +I CK+ + A + EM + PN+V + +LISG+CK+
Sbjct: 415 KMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEG 474
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E+H L + G P+ +TF ++I LC A+R +A EMVEW V PN +TYN
Sbjct: 475 ELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYN 534
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI C G+ R+ L +M + PD YT+ LI C ++ +A + +
Sbjct: 535 VLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGE 594
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ + +SAL+ K GR D+A M G D ++++ +++Q
Sbjct: 595 QQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSI 654
Query: 485 HDIVKTSKERGI 496
D++K ++G+
Sbjct: 655 IDLLKQMHDQGL 666
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 222/471 (47%), Gaps = 36/471 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI + Y+++I K + A F +M + KP+ Y LI G C+ G +
Sbjct: 419 VGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHN 478
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A RL +M G G +PN YT+T LI G C+A R+AE ++ M E NV PNE T L+
Sbjct: 479 AFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIE 538
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDR--- 179
G + + +AFELL +E+ + L+ L + SEA + + G++
Sbjct: 539 GHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKL 598
Query: 180 ----------GYLPESSTFDYTVTC---LVTGLDLNETC------GILDTFIKR------ 214
GY E D C L G+ ++ C GIL +R
Sbjct: 599 NEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLL 658
Query: 215 ------GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
G++P Y +++A KAG + + + + NV +Y +I+ CK+
Sbjct: 659 KQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKI 718
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+MD+A +CREM + PN T+ + + + K +L +LLE GF + T+
Sbjct: 719 GLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTY 777
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N +I C+ R ++A + L M++ G+ P+ I+Y+ +I C GD+ +++L++ M
Sbjct: 778 NILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLN 837
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
++PD +N LI C ++ KA + M+ G++P+ +Y++LI
Sbjct: 838 RGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 176/410 (42%), Gaps = 36/410 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP+T + A+I L +N + A F +M P+ TYN+LI G C+ G A
Sbjct: 490 GISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRA 549
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M G P+ YTY LI G C+ RV+E + ++ NE +L+HG
Sbjct: 550 FELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHG 609
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ A + R M + LVC + L+Y + +L++M D+G P
Sbjct: 610 YCKEGRLDDALDA-CREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRP 668
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG--------- 234
++ + + +L G+ D + G P TY L+ L K G
Sbjct: 669 DNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLC 728
Query: 235 -------------------------RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
++E L+ V + ++N +YN++I FCK+
Sbjct: 729 REMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLG 788
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+ A E+ M D I+P+ ++++T+I +C+ ++ + +L +L G PD +N
Sbjct: 789 RIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYN 848
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
+I C A + +M+ GV PN TYN LI C + V+ +
Sbjct: 849 FLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSST 898
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/491 (22%), Positives = 210/491 (42%), Gaps = 3/491 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S+ G+ Y ++ L K + +M P + L+ G+ + G
Sbjct: 276 LSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGN 335
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A LV +++ G AP+++ Y LI+ C ++ E + M + + PN+ T
Sbjct: 336 IGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSI 395
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ + A L + E ++L+ A ++ +M G
Sbjct: 396 LIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANG 455
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P + ++ +L+ + +G+ P T+ L+ L A R E +
Sbjct: 456 LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEAN 515
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + ++ N +YN++I+ CK RA E+ EM ++ + P+ T+ LISG
Sbjct: 516 KLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGL 575
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C V + RE + L K ++ F++++ C+ R +DALD EM+ GV +
Sbjct: 576 CSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDL 635
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ Y++LI + D + L ++M + PD + +I + + ++ A +
Sbjct: 636 VCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDI 695
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M++ G P+ +Y+ALI L K G D+A+ M + P+ T L+ L +G
Sbjct: 696 MVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGN 755
Query: 481 FEEA---HDIV 488
E+A HD++
Sbjct: 756 IEKAIQLHDVL 766
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 144/373 (38%), Gaps = 70/373 (18%)
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
+P FE + + + L + L+ N + ++R M D G LP+ T
Sbjct: 125 NPEGLFESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLS 184
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
+ L+ + D + G++P
Sbjct: 185 GVLNGLIRIRQFRMALHLFDEIVSSGLRP------------------------------- 213
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
+V Y V+ C++ RA E+ M ++ T+N I G CK+ V +
Sbjct: 214 ----DVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEA 269
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
E+ +L G + D T+ +++ LC+ FE + ++EM+E+G P+ + L+
Sbjct: 270 VEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDG 329
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
L G++ + L +NK++K G+ P
Sbjct: 330 LRKKGNIGSAFDL-------------------------VNKVKK----------FGVAPS 354
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
F Y+ALI ++ K G+ DEA+ F +M G P+ T ++++++ ++G+ + A +
Sbjct: 355 LFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLG 414
Query: 490 TSKERGISFKSFP 502
E GI +P
Sbjct: 415 KMTEVGIKATVYP 427
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 134/346 (38%), Gaps = 44/346 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P T Y +I L + + A + +Q K + ++ L+HG C+ G +D+A
Sbjct: 560 GLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDA 619
Query: 65 LR-----------------------------------LVKQMEGLGYAPNVYTYTILIDG 89
L L+KQM G P+ YT +ID
Sbjct: 620 LDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDA 679
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
A + F + +IM PN T +L++G+ + KA ELL R E L
Sbjct: 680 NAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKA-ELLCR----EMLAS 734
Query: 150 KLVCNTLLYRLSNNSMASEA----AAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
+ N Y + + SE A L + G+L + T++ + + E
Sbjct: 735 NSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAA 794
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
+L I G+ P +Y ++ + G E + + + + +YN +I
Sbjct: 795 EVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGC 854
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
C + +A E+ +M R + PN T+N+LI G C + V T +
Sbjct: 855 CVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTAD 900
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/497 (26%), Positives = 234/497 (47%), Gaps = 9/497 (1%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQM--SVDQCKPDRFTYNILIHGICRIGVVDE 63
++P+ Y ++I AL K +D + + + Q YN+L+ +C+ G VDE
Sbjct: 225 VTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDE 284
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+RL +ME AP++ T+ ILI+G + R EV +L M+ + PNE L+
Sbjct: 285 AIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELID 344
Query: 124 GVFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ C H +A L + +E + + N + L A IL +M G
Sbjct: 345 --WHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGM 402
Query: 182 LPESSTFDYTVTCLV--TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
S F+ V L+ TG L ++ +KRG+KP + + L + R E
Sbjct: 403 TIHSGLFNSVVAGLLQRTG-RLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEA 461
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + L N+ + N +I C+ M ATE+ R M ++ + + +T+N +I G
Sbjct: 462 VGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQG 521
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CKD+++ + +L ++ GFKPD + FNS+I C + E+AL L +M GV P+
Sbjct: 522 CCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPD 581
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
++Y +I C D+ ++ ++ A + P+ +NALI + R I A
Sbjct: 582 VVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLD 641
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+M ++G++P N +Y +L+ + +G DEAK F +N ++++ L + G
Sbjct: 642 TMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIG 701
Query: 480 RFEEAHDIVKTSKERGI 496
+ +EA + + + R I
Sbjct: 702 KMDEAMNYFEEMRSRSI 718
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/508 (23%), Positives = 219/508 (43%), Gaps = 36/508 (7%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN ++DAL KS +D A +M + P T+ ILI+G+ R E L+++ME
Sbjct: 269 YNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREME 328
Query: 73 GLGYAPN-----------------------------------VYTYTILIDGFCNAKRVA 97
GLG PN TY ++ C +
Sbjct: 329 GLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEME 388
Query: 98 EVFRVLEIMKERNVCPNEATVRSLVHGVF-RCLDPHKAFELLIRFMEREPLTQKLVCNTL 156
R+LE M + + S+V G+ R L+ ++R +
Sbjct: 389 RAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTAC 448
Query: 157 LYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
+L EA I KM ++G +T + + L G ++ +L T + +G+
Sbjct: 449 TKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGM 508
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
+ TY ++++ K + E + + + + + +N +I +C + M+ A
Sbjct: 509 ELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALH 568
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
+ +M+ + P++V++ T+I G+CK ++ K E L L+ CG KP+ +N++I
Sbjct: 569 LLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYG 628
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
R A+ L M G+ P +TY L+ +C G V + +F++ + + I +
Sbjct: 629 RNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVV 688
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
+ +IQ C++ K+++A F M + + P+ +Y+ L+ A KSG +EA + F M
Sbjct: 689 GYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEM 748
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEA 484
+G PD+ + N ++ Q ++A
Sbjct: 749 VSSGIVPDNVSYNTLVTGFSQVDSLDKA 776
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 146/338 (43%), Gaps = 35/338 (10%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
NA+I L + ++ A + M + D TYNI+I G C+ ++EAL+L M
Sbjct: 481 NALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIR 540
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G+ P+ Y + +I +C+ ++ E +L MK V P+ + +++ G + D K
Sbjct: 541 KGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQK 600
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A E L E + L N ++Y A++ G G
Sbjct: 601 ANEYL-----NELMACGLKPNAVIYN-----------ALIGGYGRNG------------- 631
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
+++ G+LDT G++P TY LM + AG E K+ +
Sbjct: 632 ------NISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEV 685
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
V Y ++I CK+ MD A EMR R I PN +T+ TL+ +CK + +L
Sbjct: 686 GVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLF 745
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
++ G PD ++N+++ + + A++ +E+
Sbjct: 746 DEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEI 783
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 105/223 (47%), Gaps = 3/223 (1%)
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG-FKPDKFTFNSMIDCLCRAH 339
+ R +P++ T N L+ + + T ++ + +C P+ +++ SMI LC+
Sbjct: 184 LSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVG 243
Query: 340 RFEDALDCLSEMVEWGV--PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
+ +D LS+++ G+ + YN+L+ +LC G V ++RL +M+ R++P + T
Sbjct: 244 KVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVT 303
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
F LI R ++ + M LG+ P+ + LI + G F EA + F M
Sbjct: 304 FGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMV 363
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+ T NLI L ++G E A I++ G++ S
Sbjct: 364 SKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHS 406
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 113/281 (40%), Gaps = 43/281 (15%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P ++N++I A ++ A QM ++ +PD +Y +I G C+ + +A
Sbjct: 542 GFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKA 601
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ G PN Y LI G+ ++ VL+ M+ + P T SL+H
Sbjct: 602 NEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMH- 660
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+M L + T+ + NS+ ++G GY
Sbjct: 661 ----------------WMCHAGLVDE--AKTMFEQSRKNSI---------EVGVVGY--- 690
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
T ++ GL ++E + R + P TY LM A K+G + E
Sbjct: 691 --------TIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEAS 742
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+ + + +V + SYN ++ F +V+ +D+A E E+
Sbjct: 743 KLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEI 783
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI P+ Y +++ + + +D A F+Q + + Y I+I G+C+IG +DE
Sbjct: 646 IGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDE 705
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ ++M PN TYT L+ +C + E ++ + M + P+ + +LV
Sbjct: 706 AMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVT 765
Query: 124 GVFRCLDPHKAFE 136
G + KA E
Sbjct: 766 GFSQVDSLDKAIE 778
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 359 NTITYNILIRSLCAIGDVARSLRL----FQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
+T + ++LI + C SLRL F + + R SP + T NAL+++ R +
Sbjct: 154 STPSSDLLINT-CVTSSARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGAT 212
Query: 415 EKAFFSMLTLG-LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC--NPDSYTSNLI 471
K F M + P+ +SY+++IKAL K G+ D+ + + G + + NL+
Sbjct: 213 CKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLL 272
Query: 472 LETLVQQGRFEEA 484
++ L + GR +EA
Sbjct: 273 MDALCKSGRVDEA 285
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 240/490 (48%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P T +N ++ +LVK+ A QQM ++ + D FT+NILI+ ++G+ +
Sbjct: 58 TPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFS 117
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+ ++ GY P T+ LI G C + + + + + ++ + +L++G+
Sbjct: 118 IFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLC 177
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A +LL R + ++ N ++ + + ++A + +M + P+
Sbjct: 178 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVF 237
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ ++ LN + + K + P T+ +L++ K G+ + L +
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIM 297
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
KD + +V +YN ++D +C +N +++A +I M + N+ + T+++G CK V
Sbjct: 298 MKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMV 357
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ L + P+ T++S+ID LC+ R AL + EM + G PPN +TY+ +
Sbjct: 358 DEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSI 417
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ +LC V +++ L ++ I PD+YT+ LI+ C+ ++E A+ F +L G
Sbjct: 418 LDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGY 477
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
D ++Y+ +I+ G FD+A ME NGC P++ T L++ +L ++ + A
Sbjct: 478 NLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEK 537
Query: 487 IVKTSKERGI 496
+++ RG+
Sbjct: 538 LLREMIVRGL 547
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 223/485 (45%), Gaps = 33/485 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S S + +IDA K+ +D A ++M + D Y LI G C G +D
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRG 266
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++ G +P TY LI GFC R+ E + E M ER V PN T L+ G
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDG 326
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +LL ++++ + N ++ +L +S+ ++A I+ M R P+
Sbjct: 327 LCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPD 386
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + L DL+E +L YL+L ++ Y
Sbjct: 387 NITYNSLLGGLCAKGDLDEASKLL--------------YLMLKDSSYTD----------- 421
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+V S+N +I CK N + +A +I + ++ A ++VT N L++ K
Sbjct: 422 --------PDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSG 473
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V+K EL + P+ T+ +MID C+ A L +M +PP+ YN
Sbjct: 474 DVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYN 533
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ SLC G + ++ RLF++MQ D PD+ +FN +I + I+ AE M
Sbjct: 534 CLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHA 593
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL PD F+YS LI +K G DEA F M +G PD++ + +L+ + QG ++
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKL 653
Query: 485 HDIVK 489
+ VK
Sbjct: 654 TEFVK 658
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 233/487 (47%), Gaps = 37/487 (7%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN ++ L ++ A ++M + PD +YN +I G C +++AL+L +M+
Sbjct: 145 YNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQ 204
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G G + ++ T+ ILID FC A ++ E +L+ MK + + + SL+ G C +
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELD 264
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+ L +ER + NTL+ R G L E+S
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLI----------------RGFCKLGRLKEASE----- 303
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
I + ++RGV+P TY L++ L G+ E + LN + +
Sbjct: 304 --------------IFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEE 349
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
NV +YN++I+ CK +++ A EI M+ R P+ +T+N+L+ G C ++ + +L
Sbjct: 350 PNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKL 409
Query: 313 LVMLLECG--FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
L ++L+ PD +FN++I LC+ +R ALD +VE + +T NIL+ S
Sbjct: 410 LYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNST 469
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
GDV +++ L++++ +I P+ T+ +I FC+ + A+ M L P
Sbjct: 470 LKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSV 529
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
F Y+ L+ +L K G D+A + F M+++ PD + N++++ ++ G + A ++
Sbjct: 530 FDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVG 589
Query: 491 SKERGIS 497
G+S
Sbjct: 590 MSHAGLS 596
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 134/255 (52%), Gaps = 5/255 (1%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV +YN+++ C+ +A + REMR + P++V++NT+I G C+ E+ K +L
Sbjct: 141 NVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLA 200
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ G T+ +ID C+A + ++A+ L EM G+ + I Y LIR C
Sbjct: 201 NEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDC 260
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G++ R LF ++ SP T+N LI+ FC++ ++++A + F M+ G+RP+ ++Y
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTY 320
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ LI L G+ EA Q M Q P+ T N+I+ L + +A +IV+ K+
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKK 380
Query: 494 R-----GISFKSFPG 503
R I++ S G
Sbjct: 381 RRTRPDNITYNSLLG 395
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 114/231 (49%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
N S + +++CF ++ A + M R A N+ +N L+ G C++ E K LL
Sbjct: 106 NFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLL 165
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ + PD ++N++I C E AL +EM G + +T+ ILI + C
Sbjct: 166 REMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKA 225
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G + ++ L ++M+ + D+ + +LI+ FC ++++ + F +L G P +Y
Sbjct: 226 GKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ LI+ K GR EA + F M + G P+ YT +++ L G+ +EA
Sbjct: 286 NTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 110/218 (50%)
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
R+M + D N V+ + L+ + + +L ++L+ GF + + +N ++ LCR
Sbjct: 96 RKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRN 155
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
F A+ L EM + + P+ ++YN +IR C ++ ++L+L +MQ S + T+
Sbjct: 156 LEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTW 215
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
LI +FC+ K+++A M GL D Y++LI+ G D K F + +
Sbjct: 216 GILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLE 275
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G +P + T N ++ + GR +EA +I + ERG+
Sbjct: 276 RGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGV 313
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 1/175 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ PS YN ++ +L K ++D A+ F++M D PD ++NI+I G + G + A
Sbjct: 525 LPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAE 584
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L+ M G +P+++TY+ LI+ F + E + M + P+ S++
Sbjct: 585 SLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYC 644
Query: 126 FRCLDPHKAFELLIRFMERE-PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+ K E + + ++++ L ++L C + Y S++ A +LR D+
Sbjct: 645 ISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLLRVADDK 699
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 88/196 (44%), Gaps = 5/196 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS I P++ Y +ID K+ +++A +M + + P F YN L+ +C+ G
Sbjct: 485 ISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGT 544
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+D+A RL ++M+ P+V ++ I+IDG A + +L M + P+ T
Sbjct: 545 LDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSK 604
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L++ + +A + ++ +C+++L + + ++K+ D+
Sbjct: 605 LINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKD 664
Query: 181 YLPESSTFDYTVTCLV 196
+ D +TC V
Sbjct: 665 VV-----LDKELTCTV 675
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 51/120 (42%)
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+ ++KM + + + L++ F +M K A ML G + ++Y+ L+K
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLK 150
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
L ++ F +A M QN PD + N ++ + E+A + + G S+
Sbjct: 151 GLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSW 210
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/489 (25%), Positives = 237/489 (48%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + ++ +LVKSN +QM + D +ILI+ ++G + +
Sbjct: 70 PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSV 129
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ +GY PNV T T LI G C ++ + + + + N+ + +L++G+ +
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK 189
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
A +LL R + ++ NT++ + + +EA + +M +G P+ T
Sbjct: 190 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 249
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ ++ + + + + I + P T+ +L++ K R E L +
Sbjct: 250 YNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMM 309
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K + +V +YN ++D +C V +++A I + R + PN+ +++ +I G CK +V
Sbjct: 310 KQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVD 369
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ L + PD T+NS+ID LC+ + AL + EM + GVP + ITYN ++
Sbjct: 370 EAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSIL 429
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+LC V +++ L KM+ + I PDI T+ L+ C+ ++E A F +L G
Sbjct: 430 DALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYI 489
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
D Y+A+I+ G FDE+ ME+NGC P++ T +I+ +L + ++A +
Sbjct: 490 LDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKL 549
Query: 488 VKTSKERGI 496
++ RG+
Sbjct: 550 LREMITRGL 558
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 122/239 (51%)
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
+++I+CF ++ + + ++ PN++T TLI G C ++H+ + ++
Sbjct: 111 SILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVA 170
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
GF +K ++ ++I+ LC+ + AL L + V PN + YN +I S+C + V
Sbjct: 171 LGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNE 230
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+ L+ +M + ISPD+ T+NALI FC + K++ A F M+ + P+ ++++ L+
Sbjct: 231 AFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVD 290
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
K R EAK M + G PD +T N +++ +A I T +RG++
Sbjct: 291 GFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVN 349
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 135/315 (42%), Gaps = 43/315 (13%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F I+P+ +N ++D K + A M KPD FTYN L+ C + V+
Sbjct: 275 FENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVN 334
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+A + + G PN+++Y+I+I GFC K+V E + + M N+ P+ T SL+
Sbjct: 335 KAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLI 394
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + A +L+ +R K+ N++L L N +A A+L KM D G
Sbjct: 395 DGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG-- 452
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
++P TY L++ L K GR +E R
Sbjct: 453 ---------------------------------IQPDICTYTTLVDGLCKNGR-LEDARI 478
Query: 243 LNHVFKDRLVS----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
VF+D LV +VN Y +I FC + D + ++ +M + PN VT+ +I
Sbjct: 479 ---VFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIIC 535
Query: 299 GHCKDAEVHKTRELL 313
E K +LL
Sbjct: 536 SLFDKDENDKAEKLL 550
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 75/176 (42%)
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
KP F F ++ L +++ + + +M G+ + + +ILI +G S
Sbjct: 69 KPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFS 128
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
+ K+ P++ T LI+ C +I +A + ++ LG + SY LI L
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLC 188
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
K G+ A Q ++ P+ N I++++ + EA D+ +GIS
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGIS 244
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 241/491 (49%), Gaps = 1/491 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ ++ A+ K N DL +QM + +TY+I I+ CR + AL +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P++ T L++GFC+ R++E +++ M E P+ T +LVHG+F+
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+A L+ R + + + ++ L A +L KM +
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + L +++ + + +G+KP TY L+ L GR + R L+ +
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM-RDRDIAPNLVTFNTLISGHCKDAEV 306
+ + ++ +N +ID F K + A ++ EM + + P++V +NTLI G CK V
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ E+ + + G + T+ ++I +A ++A +MV GV P+ +TYNIL
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ LC G+V +L +F+ MQ + DI T+ +I++ C+ K+E F S+ G+
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+P+ +Y+ ++ + G +EA F+ M+++G P+S T N ++ ++ G + +
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAE 552
Query: 487 IVKTSKERGIS 497
++K + G +
Sbjct: 553 LIKEMRSCGFA 563
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 230/484 (47%), Gaps = 6/484 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGIS + Y+ I+ + + + LA +M P T N L++G C + E
Sbjct: 104 LGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 163
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ LV QM +GY P+ T+T L+ G + +E ++E M + P+ T ++++
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +P A LL + + + ++ NT++ L +A + KM +G P
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ ++CL ++ +L +++ + P + L++A K G+ VE ++
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 244 NHVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + K + +V +YN +I FCK ++ E+ REM R + N VT+ TLI G +
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + ++ G PD T+N ++D LC E AL M + + + +T
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y +I +LC G V LF + + P++ T+ ++ FCR E+A+ F M
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN--PDSYTSNLILETLVQQGR 480
G P++ +Y+ LI+A ++ G DEA L E C D+ T L+ ++ GR
Sbjct: 524 EDGPLPNSGTYNTLIRARLRDG--DEAASAELIKEMRSCGFAGDASTFGLV-TNMLHDGR 580
Query: 481 FEEA 484
+++
Sbjct: 581 LDKS 584
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 147/290 (50%), Gaps = 2/290 (0%)
Query: 199 LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS-NVNS 257
L L++ G+ +K P + L+ A+ K + + L ++ +S N+ +
Sbjct: 54 LKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNK-FDLVISLGEQMQNLGISHNLYT 112
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
Y++ I+ FC+ + + A I +M P++VT N+L++G C + + L+ ++
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
E G++PD TF +++ L + ++ +A+ + MV G P+ +TY +I LC G+
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+L L KM+ +I D+ +N +I C+ ++ A F M T G++PD F+Y+ LI
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
L GR+ +A + M + NPD N +++ V++G+ EA +
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 154/345 (44%), Gaps = 1/345 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I +YN +ID L K +D A+ F +M KPD FTYN LI +C G +A
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL-EIMKERNVCPNEATVRSLVHG 124
RL+ M P++ + LID F ++ E ++ E++K ++ P+ +L+ G
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + E+ +R + + TL++ A + ++M G P+
Sbjct: 366 FCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L ++ + + KR +K TY ++EAL KAG+ +G
Sbjct: 426 IMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFC 485
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + NV +Y ++ FC+ + + A + EM++ PN T+NTLI +D
Sbjct: 486 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+ + EL+ + CGF D TF + + L + LD LS
Sbjct: 546 DEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFLDMLS 590
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 40/88 (45%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P+ Y ++ + + A F +M D P+ TYN LI R G
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGD 546
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID 88
+ L+K+M G+A + T+ ++ +
Sbjct: 547 EAASAELIKEMRSCGFAGDASTFGLVTN 574
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 205/436 (47%), Gaps = 40/436 (9%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN++IDA VK+ A ++ M +PD +T+N+L++ + VD +L ++M+
Sbjct: 92 YNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQ 151
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
+PNV TY+ILID C V + +V MK R PN T S++ G+ +
Sbjct: 152 NQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVD 211
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
KAF L + ++V N+L++ L + A AA + R+M +G P+ TF
Sbjct: 212 KAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTF---- 267
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
T LV GL + AGR E R
Sbjct: 268 TSLVYGLGV-------------------------------AGRASEARRIFQEARDVGCA 296
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+VN YN++ID CK +D A EI E+ + + P++ TFN L+ G CK +H L
Sbjct: 297 LDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFIL 356
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L + G PD +N++ID L ++ R E+A L EM G P+ +TYN LI C
Sbjct: 357 LGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCK 416
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM----LTLGLRP 428
G + +LRLF+++ A + + T+N ++ C ++++A K F M + + P
Sbjct: 417 GGRIEDALRLFEEISAKGFANTV-TYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDP 475
Query: 429 DNFSYSALIKALIKSG 444
D +Y+ L+ ++G
Sbjct: 476 DFVTYTTLLNGARQAG 491
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 182/382 (47%), Gaps = 7/382 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P T +N +++A K+ +D + F++M C P+ TY+ILI +C+ G V++A
Sbjct: 119 GLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKA 178
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ M+ G PN++TYT +IDG + V + F + E M + SL+HG
Sbjct: 179 LKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHG 238
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R A +L + + + +L+Y L ASEA I ++ D G +
Sbjct: 239 LGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALD 298
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ + L L+E I + G+ P T+ LM+ L K+GR + L
Sbjct: 299 VNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLG 358
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +V YN +ID K ++ A ++ EM+ P++VT+NTLI CK
Sbjct: 359 DMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGG 418
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS----EMVEWGVPPNT 360
+ L + GF + T+N++++ LC A R ++A + E V+ + P+
Sbjct: 419 RIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDF 477
Query: 361 ITYNILIRSL--CAIGDVARSL 380
+TY L+ + ++A SL
Sbjct: 478 VTYTTLLNGARQAGLSELANSL 499
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 155/344 (45%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
N+L+ +A A+ R MG G P++ TF+ + ++ + +
Sbjct: 93 NSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQN 152
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
+ P TY +L++A+ K G + + + N+ +Y +ID K +D+
Sbjct: 153 QNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDK 212
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + EM + V +N+LI G + +L +L G +PD TF S++
Sbjct: 213 AFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVY 272
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
L A R +A E + G + YN+LI +LC + + +F +++ D + P
Sbjct: 273 GLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVP 332
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
D+YTFNAL+ C+ +I A M G PD Y+ LI L KSGR +EA Q
Sbjct: 333 DVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLL 392
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
L M+ G PD T N +++ + GR E+A + + +G +
Sbjct: 393 LEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFA 436
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 156/318 (49%), Gaps = 1/318 (0%)
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
A+ R G R L +S ++ + V + + + G++P T+ +LM A
Sbjct: 76 ALKRMEGHRCALT-ASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAF 134
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
KA R + + NV +Y+++ID CK +++A ++ +M+ R PN+
Sbjct: 135 KKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNI 194
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
T+ ++I G K V K L + G + +NS+I L R+ R + A E
Sbjct: 195 FTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFRE 254
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M+ G+ P+ +T+ L+ L G + + R+FQ+ + + D+ +N LI + C+ +
Sbjct: 255 MLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKR 314
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+++A + F + GL PD ++++AL+ L KSGR +A M++ GC PD N
Sbjct: 315 LDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNT 374
Query: 471 ILETLVQQGRFEEAHDIV 488
+++ L + GR EEA ++
Sbjct: 375 LIDGLRKSGRVEEAGQLL 392
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 121/247 (48%)
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
R ++YN +ID F K +A + R M + P+ TFN L++ K V
Sbjct: 84 RCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSV 143
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+L + P+ T++ +ID +C+ E AL +M G PN TY +I
Sbjct: 144 WKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDG 203
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
L G V ++ LF++M ++ + +N+LI R + + A K F ML+ GL+PD
Sbjct: 204 LGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPD 263
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+ ++++L+ L +GR EA++ F GC D N++++TL + R +EA +I
Sbjct: 264 HVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFG 323
Query: 490 TSKERGI 496
+E G+
Sbjct: 324 ELEEDGL 330
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 112/231 (48%)
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
+ +++++ E + M A +N+LI K K + ++ + G +PD
Sbjct: 64 YASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPD 123
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
+TFN +++ +A R + EM PN ITY+ILI ++C G V ++L++F
Sbjct: 124 TYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFL 183
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
M++ P+I+T+ ++I + ++KA F M + GL Y++LI L +SG
Sbjct: 184 DMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSG 243
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
R D A + F M G PD T ++ L GR EA I + +++ G
Sbjct: 244 RADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVG 294
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 98/231 (42%), Gaps = 32/231 (13%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G + LYN +ID L KS +D A+ F ++ D PD +T+N L+ G+C+ G + +
Sbjct: 293 VGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHD 352
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+ M+ G P+V Y LIDG + RV E ++L M+ P+ T +L+
Sbjct: 353 AFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLID 412
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ A L E ++ K NT+ Y IL + G +
Sbjct: 413 ESCKGGRIEDALRLF------EEISAKGFANTVTYN-----------TILNGLCMAGRVD 455
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
E+ L G+ G++D P F TY L+ +AG
Sbjct: 456 EAYK-------LFNGMKQETVDGVID--------PDFVTYTTLLNGARQAG 491
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 221/484 (45%), Gaps = 1/484 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + N +I++ N ++ A+ ++ C+PD ++ LI G+C G + EA
Sbjct: 104 GIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEA 163
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M G+ P+V Y LI+G C + R+L M++ N P+ +L+H
Sbjct: 164 LHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHS 223
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF L + + + CN+L+Y L N +L +M D +P
Sbjct: 224 LCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPN 283
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + V L + + ++D + GV+P TY L++ E + +
Sbjct: 284 AISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFD 343
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ NV SYN +I+ +CK+ MD+A + EM + + PN VT+NTLI G C
Sbjct: 344 MMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVG 403
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ L ++ CG PD T+ ++D LC+ + A+ L + + P+ Y
Sbjct: 404 RLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYT 463
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+I +C G++ + LF + + + P+++T+N + C+ +++A K F M
Sbjct: 464 IVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDEN 523
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE-E 483
D +Y+ + + +++ A Q M G + D T+ L++ L G + E
Sbjct: 524 ACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSE 583
Query: 484 AHDI 487
AH +
Sbjct: 584 AHKL 587
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/523 (24%), Positives = 231/523 (44%), Gaps = 39/523 (7%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
L+N + N++D A F +M P + ++ I ++ L L ++M
Sbjct: 41 LHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKM 100
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
+ G NVYT +LI+ FC+ RV F VL + + P+ A+ +L+ G+ CL+
Sbjct: 101 DSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGL--CLEG 158
Query: 132 H--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
+A L + + ++ TL+ L S A +LR M P+ +
Sbjct: 159 QIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYG 218
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
+ L + + I +G+ P T L+ AL G + LN +
Sbjct: 219 TLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDS 278
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
+++ N S V+D CK M+ +A ++ M + P++VT+ LI GHC +E+ +
Sbjct: 279 KIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEA 338
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
++ M++ G P+ F++N++I+ C+ R + A+ EM + PNT+TYN LI
Sbjct: 339 VKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHG 398
Query: 370 LCAIGDVARSLRLFQKM-----------------------------------QADRISPD 394
LC +G + ++ LF++M + + PD
Sbjct: 399 LCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPD 458
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
I + +I CR ++E A F ++ + GL+P+ ++Y+ + L K G DEA + F+
Sbjct: 459 IQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFM 518
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M++N C+ D T N I + ++ A +++ RG S
Sbjct: 519 EMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFS 561
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P+ YN + L K +D A F +M + C D TYN + G R
Sbjct: 485 LSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNE 544
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILI-----DGF--CNAKRVAEVFRVLEIMKERNVCP 113
A++L+++M G++ +V T T+L+ DG A ++ ++F L I + V
Sbjct: 545 TSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPHLRIQVKDTVFC 604
Query: 114 NEATVRSL 121
E + +L
Sbjct: 605 KEDDINAL 612
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 217/457 (47%), Gaps = 7/457 (1%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN ++ L + ++ A F +M+ PD TY ILIHG C +G ++ A++L+ M
Sbjct: 265 YNILLKVLCGAGRVEDARQLFDEMA---SPPDVVTYGILIHGYCALGELENAVKLLDDMV 321
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G PN YT ++ C+ RV++ V+E M V +EA +++ G D
Sbjct: 322 ARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLV 381
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A + T + TL+ L EA +L++M R + T+ V
Sbjct: 382 SARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLV 441
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR-L 251
+ E + +T ++RGV P TY L + L K G DV+ L H ++ L
Sbjct: 442 DGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQG-DVQAANELLHEMSNKGL 500
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
N +YN +I+ CK +D+A +M + P++ T+ TLI CK E+ + +
Sbjct: 501 ELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHD 560
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
LL +L+ G KP T+N +++ C + R E L M+E + PN TYN L++ C
Sbjct: 561 LLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYC 620
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
++ + +++ M + + P+ T+N LI+ C+ +++A+ M+ G R
Sbjct: 621 IGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTAS 680
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNG--CNPDSY 466
SYSALI+ L K +F EA++ F M + G PD Y
Sbjct: 681 SYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVY 717
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 232/495 (46%), Gaps = 15/495 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRF--TYNILIHGICRIGVVD 62
GISPS NAV+ L +I+L FQ + PD+ +YNIL+ +C G V+
Sbjct: 230 GISPSPEACNAVLSRLPLDEAIEL----FQGL------PDKNVCSYNILLKVLCGAGRVE 279
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+A +L +M P+V TY ILI G+C + ++L+ M R V PN S+V
Sbjct: 280 DARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVV 336
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ A ++ + + + + V T+L N A +M +G
Sbjct: 337 ALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLA 396
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+ T+ + L +L E +L + R + TY +L++ K G+ E +
Sbjct: 397 TDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQV 456
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
N + + + NV +Y + D CK + A E+ EM ++ + N T+N+LI+G CK
Sbjct: 457 HNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCK 516
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + + G KPD +T+ ++ID LC++ + A D L EM++ G+ P +T
Sbjct: 517 AGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVT 576
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN+L+ C G V +L + M I P+ T+N+L++ +C N ++ + + M
Sbjct: 577 YNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMC 636
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ + P+ +Y+ LIK K+ EA+ M + G + + + ++ L ++ +F
Sbjct: 637 SRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFV 696
Query: 483 EAHDIVKTSKERGIS 497
EA + ++ G +
Sbjct: 697 EARKLFHDMRKEGFT 711
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 178/396 (44%), Gaps = 2/396 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ +Y +V+ L + A + M + D Y ++ G C G + A
Sbjct: 324 GVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSA 383
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R +M+ G A + TYT LI+G C A + E +VL+ M R + +E T LV G
Sbjct: 384 RRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDG 443
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +AF++ ++R + L L A +L +M ++G
Sbjct: 444 YCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELN 503
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + L L++ + G+KP TY L++AL K+G L
Sbjct: 504 ACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQ 563
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + + +YN++++ FC ++ ++ M +++I PN T+N+L+ +C
Sbjct: 564 EMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGN 623
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ T E+ + +P++ T+N +I C+A ++A +EM+E G +Y+
Sbjct: 624 NMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYS 683
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRIS--PDIYTF 398
LIR L + +LF M+ + + PD+Y F
Sbjct: 684 ALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNF 719
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 121/247 (48%), Gaps = 3/247 (1%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV SYN+++ C ++ A ++ EM P++VT+ LI G+C E+ +LL
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLL 317
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++ G +P+ + S++ LC R DAL + +MV V + Y ++ C
Sbjct: 318 DDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNK 377
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
GD+ + R F +MQ ++ D T+ LI CR ++++AEK ML L D +Y
Sbjct: 378 GDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTY 437
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ L+ K G+ EA Q +M Q G P+ T + + L +QG + A++++
Sbjct: 438 TVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSN 497
Query: 494 RGISFKS 500
+G+ +
Sbjct: 498 KGLELNA 504
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 151/381 (39%), Gaps = 37/381 (9%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
+Y V+ + A F +M D TY LI+G+CR G + EA +++++M
Sbjct: 366 VYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEM 425
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
+ TYT+L+DG+C ++AE F+V M +R V PN T +L G+ + D
Sbjct: 426 LARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDV 485
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
A ELL + N+L+ L +A + M G P+ T+
Sbjct: 486 QAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTL 545
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL-------- 243
+ L +L+ +L + G+KP TY +LM +GR VEG + L
Sbjct: 546 IDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGR-VEGGKKLLEWMLEKN 604
Query: 244 ------------------------NHVFKDRLVSNV----NSYNMVIDCFCKVNMMDRAT 275
++K NV N+YN++I CK M A
Sbjct: 605 IHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQ 664
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
EM ++ +++ LI K + + R+L + + GF + +N ID
Sbjct: 665 YFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFN 724
Query: 336 CRAHRFEDALDCLSEMVEWGV 356
E L E+VE +
Sbjct: 725 FNEDNLEATLALCDELVEASI 745
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 230/484 (47%), Gaps = 37/484 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P L +I S +ID A + + KPD F YN +I G C+ ++ A +
Sbjct: 8 PDVILCTKLIKGFFNSRNIDKA-TRVMGILEKHGKPDVFAYNAVISGFCKANRIESAKTV 66
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE-IMKERNVCPNEATVRSLVHGVF 126
+ +M+ G++P+V T+ I+I FC ++ +V E ++K+ N P T L+
Sbjct: 67 LDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEA-- 124
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
Y L EA +L +M RG P++
Sbjct: 125 -------------------------------YILEGG--IDEALKLLDEMLSRGLEPDTF 151
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ L ++ + T RG KP TY +L+ AL G+ EG+++++ +
Sbjct: 152 TYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEI 211
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
F NV +Y+++I C+ ++ + + + M+++ + P+ ++ LI+ C++ ++
Sbjct: 212 FSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKL 271
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
E L ++ GF PD +N+++ LC+ + A++ ++ E G PPN +YN +
Sbjct: 272 DMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTM 331
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ +L + GD R+L + +M + I PD+ T+N+LI CR +++A ML+
Sbjct: 332 LSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRF 391
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+P+ SY ++ L K+ R D+A + +M +NGC P+ T L++E + G +A +
Sbjct: 392 QPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAME 451
Query: 487 IVKT 490
+ +
Sbjct: 452 LANS 455
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 185/408 (45%), Gaps = 11/408 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ-CKPDRFTYNILIHGICRIGVVDE 63
G SP +N +I IDLA F+++ D CKP TY ILI G +DE
Sbjct: 74 GFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDE 133
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL+L+ +M G P+ +TY ++ G C +V F + + R P+ T L+
Sbjct: 134 ALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLR 193
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + + + R + + L+ L + E+ +++ M ++G P
Sbjct: 194 ALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTP 253
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ +D + L+ LD I G P Y +M AL K G
Sbjct: 254 DAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIF 313
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + NV+SYN ++ RA + +M + I P+++T+N+LIS C+D
Sbjct: 314 GKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRD 373
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V + LL +L F+P+ ++ +++ LC+AHR +DA++ L+ M+E G PN TY
Sbjct: 374 GMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTY 433
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ-SFCRMNK 410
+LI + G + QA ++ +Y NA+ + SF R+NK
Sbjct: 434 TLLIEGIGFSG---------SRTQAMELANSLYIMNAISEDSFKRLNK 472
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 166/350 (47%), Gaps = 8/350 (2%)
Query: 151 LVCNTLL---YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGI 207
++C L+ + N A+ IL K G P+ ++ ++ + +
Sbjct: 11 ILCTKLIKGFFNSRNIDKATRVMGILEKHGK----PDVFAYNAVISGFCKANRIESAKTV 66
Query: 208 LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR-LVSNVNSYNMVIDCFC 266
LD ++G P T+ +++ G+ + + KD + +Y ++I+ +
Sbjct: 67 LDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYI 126
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
+D A ++ EM R + P+ T+N + G CK+ +V + E + L G KPD
Sbjct: 127 LEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVI 186
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+N ++ L ++++ +SE+ G PN +TY+ILI SLC G + S+ L + M
Sbjct: 187 TYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVM 246
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ ++PD Y ++ LI +FCR K++ A + M+ G PD +Y+ ++ AL K+G
Sbjct: 247 KEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNG 306
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
D A + F +++ GC P+ + N +L L G A ++ +GI
Sbjct: 307 DHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGI 356
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 129/232 (55%), Gaps = 2/232 (0%)
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+D+AT + + ++ P++ +N +ISG CK + + +L + GF PD T N
Sbjct: 26 IDKATRV-MGILEKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNI 84
Query: 331 MIDCLCRAHRFEDALDCLSEMV-EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
MI C + + AL E++ + P ITY ILI + G + +L+L +M +
Sbjct: 85 MIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSR 144
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ PD +T+N + + C+ K+++A + ++ + G +PD +Y+ L++AL+ G++DE
Sbjct: 145 GLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEG 204
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
++ + GC P+ T ++++ +L + G+ EE+ ++VK KE+G++ ++
Sbjct: 205 EKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAY 256
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 64/134 (47%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P+ YN ++ AL S A QM PD TYN LI +CR G+VDE
Sbjct: 319 VGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDE 378
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+ M + PN+ +Y ++ G C A R+ + VL M E PNE T L+
Sbjct: 379 AIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIE 438
Query: 124 GVFRCLDPHKAFEL 137
G+ +A EL
Sbjct: 439 GIGFSGSRTQAMEL 452
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
MV P+ I LI+ ++ ++ R+ ++ PD++ +NA+I FC+ N+
Sbjct: 1 MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM-EQNGCNPDSYTSN 469
IE A+ M G PD +++ +I G+ D A + F + + N C P T
Sbjct: 60 IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+++E + +G +EA ++ RG+ +F
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTF 151
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/581 (23%), Positives = 257/581 (44%), Gaps = 89/581 (15%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG PS YNA++ ++++ +D AYL ++MS D +T +H +C+ G E
Sbjct: 226 LGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWRE 285
Query: 64 ALRLVKQME-------------GLGYA-------------------PNVYTYTILIDGFC 91
AL L+++ E GL A PNV TY IL+ G
Sbjct: 286 ALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCL 345
Query: 92 NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF---------- 141
+++ R+L +M P+ SL+H R D A++LL +
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV 405
Query: 142 ----------------------MEREPLTQKLVCNTLLYRLSNNSMA---------SEAA 170
+ + + L + +L +++ +++A +A
Sbjct: 406 VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAY 465
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
+I+R+M +G++P++ST+ + L ++ + + V P TY +L+++
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSF 525
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
K G + ++ + + +D NV +Y +I + K M A E+ M PN+
Sbjct: 526 CKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNV 585
Query: 291 VTFNTLISGHCKDAEVHKTRELLVML--------LECGFK--------PDKFTFNSMIDC 334
VT+ LI GHCK ++ K ++ + ++ FK P+ FT+ +++D
Sbjct: 586 VTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDG 645
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LC+AH+ ++A D L M G PN I Y+ LI C +G + + +F KM P+
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+YT+++LI + +++ A K ML P+ Y+ +I L K G+ DEA +
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
ME+ GC+P+ T +++ + G+ ++ ++++ +G
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 218/489 (44%), Gaps = 34/489 (6%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
M + C P R +N LIH CR G A +L+K+M G P Y ILI G C
Sbjct: 357 LSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICG 416
Query: 93 AKRVAEVFRVLEI-------MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
+++ + VLE+ M + +V N+ V +L RCL FE + RE
Sbjct: 417 NEKLPSL-DVLELAEKAYGEMLDAHVVLNKVNVSNLA----RCLCGAGKFEKAYSII-RE 470
Query: 146 PLTQKLVCNTLLYR-----LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLD 200
+++ + +T Y L N S A + +M +P+ T+ +
Sbjct: 471 MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGL 530
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
L + D ++ G P TY L+ A KA + + + + + NV +Y
Sbjct: 531 LQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTA 590
Query: 261 VIDCFCKVNMMDRATEICREMR-DRDIA---------------PNLVTFNTLISGHCKDA 304
+ID CK +++A +I MR + DI PN+ T+ L+ G CK
Sbjct: 591 LIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAH 650
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V + R+LL ++ G +P+ ++++ID C+ + ++A ++M E G PN TY+
Sbjct: 651 KVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYS 710
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI L + +L++ +M + +P++ + +I C++ K ++A + M
Sbjct: 711 SLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEK 770
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G P+ +Y+A+I K+G+ D+ + M GC P+ T +++ G ++A
Sbjct: 771 GCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDA 830
Query: 485 HDIVKTSKE 493
H ++ K+
Sbjct: 831 HQLLDEMKQ 839
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 134/500 (26%), Positives = 220/500 (44%), Gaps = 24/500 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T Y+ VI L ++ +D A+L F++M + PD FTY ILI C++G++ +A
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQA 534
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G APNV TYT LI + A++++ + E+M PN T +L+ G
Sbjct: 535 RKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDG 594
Query: 125 VFRCLDPHKAFELLIRFME------------------REPLTQKLVCNTLLYRLSNNSMA 166
+ KA ++ R R+P L+ L
Sbjct: 595 HCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDP--NIFTYGALVDGLCKAHKV 652
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
EA +L M G P +D + L+E + +RG P TY L
Sbjct: 653 KEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSL 712
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ L+K R + L+ + ++ NV Y +ID CKV D A + M ++
Sbjct: 713 IDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGC 772
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN+VT+ +I G K +V K EL+ + G P+ T+ +I+ C A +DA
Sbjct: 773 HPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQ 832
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L EM + P + Y +I + SL L ++ + P I + LI SFC
Sbjct: 833 LLDEMKQTYWPKHMAGYRKVIEGFNR--EFIISLGLLDEIAENVAVPIIPAYRILIDSFC 890
Query: 407 RMNKIEKAEKAF--FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+ ++E A + S T D YS+LI++L + + D+A + + M + G P+
Sbjct: 891 KAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPE 950
Query: 465 SYTSNLILETLVQQGRFEEA 484
+++ L++ R+EEA
Sbjct: 951 LSIFFYLVKGLIRINRWEEA 970
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/577 (22%), Positives = 230/577 (39%), Gaps = 95/577 (16%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNIL------------------- 51
+L N +I ++ ++A + ++ KP R TYN L
Sbjct: 198 KLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHRE 257
Query: 52 ----------------IHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR 95
+H +C+ G EAL L+++ E + + YT +I G C A
Sbjct: 258 MSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEE---FKLDTVIYTQMISGLCEASL 314
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT 155
E L M+ + PN T R L+ G R + +L + + + N+
Sbjct: 315 FEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNS 374
Query: 156 LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT---------------------- 193
L++ + S A +L+KMGD G P ++ +
Sbjct: 375 LIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYG 434
Query: 194 -------------------CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
CL + I+ + +G P STY ++ L A
Sbjct: 435 EMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNAS 494
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
+ + + +V +V +Y ++ID FCKV ++ +A + EM APN+VT+
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM-VE 353
LI + K ++ EL M+L G P+ T+ ++ID C++ + E A + M
Sbjct: 555 ALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGN 614
Query: 354 WGVP---------------PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+P PN TY L+ LC V + L M + P+ +
Sbjct: 615 ADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVY 674
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+ALI FC++ K+++A+ F M G P+ ++YS+LI L K R D A + M +
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
N C P+ +++ L + G+ +EA+ ++ +E+G
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKG 771
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 173/416 (41%), Gaps = 95/416 (22%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y A++D L K++ + A MSV+ C+P+ Y+ LI G C++G +DEA +
Sbjct: 634 PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693
Query: 68 VKQMEGLGYAPNVYTY-----------------------------------TILIDGFCN 92
+M GY PNVYTY T +IDG C
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
+ E +R++ +M+E+ PN T +++ G + K EL
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLEL--------------- 798
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT-CLVTGLDLNETCGILDTF 211
+R+MG +G P T+ + C GL L++ +LD
Sbjct: 799 --------------------MRQMGAKGCAPNFVTYRVLINHCCAAGL-LDDAHQLLDEM 837
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+ + Y ++E + G L+ + ++ V + +Y ++ID FCK +
Sbjct: 838 KQTYWPKHMAGYRKVIEGFNREFIISLG--LLDEIAENVAVPIIPAYRILIDSFCKAGRL 895
Query: 272 DRATEICREMR--------DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
+ A E+ +EM D+D+ +L+ +L S +V K EL +++ G P
Sbjct: 896 ELALELHKEMSSCTSYSAADKDLYSSLIESLSLAS------KVDKAFELYADMIKRGGIP 949
Query: 324 DKFTFNSMIDCLCRAHRFEDAL---DCLSEM----VEWGVPPNTITYNILIRSLCA 372
+ F ++ L R +R+E+AL DC+ +M V G ++ Y L +LC+
Sbjct: 950 ELSIFFYLVKGLIRINRWEEALQLSDCICQMMVDFVREGFLGSSHDYEFLNWTLCS 1005
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/581 (23%), Positives = 257/581 (44%), Gaps = 89/581 (15%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG PS YNA++ ++++ +D AYL ++MS D +T +H +C+ G E
Sbjct: 226 LGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWRE 285
Query: 64 ALRLVKQME-------------GLGYA-------------------PNVYTYTILIDGFC 91
AL L+++ E GL A PNV TY IL+ G
Sbjct: 286 ALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCL 345
Query: 92 NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF---------- 141
+++ R+L +M P+ SL+H R D A++LL +
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV 405
Query: 142 ----------------------MEREPLTQKLVCNTLLYRLSNNSMA---------SEAA 170
+ + + L + +L +++ +++A +A
Sbjct: 406 VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAY 465
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
+I+R+M +G++P++ST+ + L ++ + + V P TY +L+++
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSF 525
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
K G + ++ + + +D NV +Y +I + K M A E+ M PN+
Sbjct: 526 CKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNV 585
Query: 291 VTFNTLISGHCKDAEVHKTRELLVML--------LECGFK--------PDKFTFNSMIDC 334
VT+ LI GHCK ++ K ++ + ++ FK P+ FT+ +++D
Sbjct: 586 VTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDG 645
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LC+AH+ ++A D L M G PN I Y+ LI C +G + + +F KM P+
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+YT+++LI + +++ A K ML P+ Y+ +I L K G+ DEA +
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
ME+ GC+P+ T +++ + G+ ++ ++++ +G
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 218/489 (44%), Gaps = 34/489 (6%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
M + C P R +N LIH CR G A +L+K+M G P Y ILI G C
Sbjct: 357 LSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICG 416
Query: 93 AKRVAEVFRVLEI-------MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
+++ + VLE+ M + +V N+ V +L RCL FE + RE
Sbjct: 417 NEKLPSL-DVLELAEKAYGEMLDAHVVLNKVNVSNLA----RCLCGAGKFEKAYSII-RE 470
Query: 146 PLTQKLVCNTLLYR-----LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLD 200
+++ + +T Y L N S A + +M +P+ T+ +
Sbjct: 471 MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGL 530
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
L + D ++ G P TY L+ A KA + + + + + NV +Y
Sbjct: 531 LQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTA 590
Query: 261 VIDCFCKVNMMDRATEICREMR-DRDIA---------------PNLVTFNTLISGHCKDA 304
+ID CK +++A +I MR + DI PN+ T+ L+ G CK
Sbjct: 591 LIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAH 650
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V + R+LL ++ G +P+ ++++ID C+ + ++A ++M E G PN TY+
Sbjct: 651 KVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYS 710
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI L + +L++ +M + +P++ + +I C++ K ++A + M
Sbjct: 711 SLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEK 770
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G P+ +Y+A+I K+G+ D+ + M GC P+ T +++ G ++A
Sbjct: 771 GCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDA 830
Query: 485 HDIVKTSKE 493
H ++ K+
Sbjct: 831 HQLLDEMKQ 839
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 209/480 (43%), Gaps = 24/480 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T Y+ VI L ++ +D A+L F++M + PD FTY ILI C++G++ +A
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQA 534
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G APNV TYT LI + A++++ + E+M PN T +L+ G
Sbjct: 535 RKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDG 594
Query: 125 VFRCLDPHKAFELLIRFME------------------REPLTQKLVCNTLLYRLSNNSMA 166
+ KA ++ R R+P L+ L
Sbjct: 595 HCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDP--NIFTYGALVDGLCKAHKV 652
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
EA +L M G P +D + L+E + +RG P TY L
Sbjct: 653 KEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSL 712
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ L+K R + L+ + ++ NV Y +ID CKV D A + M ++
Sbjct: 713 IDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGC 772
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN+VT+ +I G K +V K EL+ + G P+ T+ +I+ C A +DA
Sbjct: 773 HPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQ 832
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L EM + P + Y +I + SL L ++ + P I + LI SFC
Sbjct: 833 LLDEMKQTYWPKHMAGYRKVIEGFNR--EFIISLGLLDEIAENVAVPIIPAYRILIDSFC 890
Query: 407 RMNKIEKAEK--AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+ ++E A + S T D YS+LI++L + + D+A + + M + G P+
Sbjct: 891 KAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPE 950
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/577 (22%), Positives = 230/577 (39%), Gaps = 95/577 (16%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNIL------------------- 51
+L N +I ++ ++A + ++ KP R TYN L
Sbjct: 198 KLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHRE 257
Query: 52 ----------------IHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR 95
+H +C+ G EAL L+++ E + + YT +I G C A
Sbjct: 258 MSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEE---FKLDTVIYTQMISGLCEASL 314
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT 155
E L M+ + PN T R L+ G R + +L + + + N+
Sbjct: 315 FEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNS 374
Query: 156 LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT---------------------- 193
L++ + S A +L+KMGD G P ++ +
Sbjct: 375 LIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYG 434
Query: 194 -------------------CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
CL + I+ + +G P STY ++ L A
Sbjct: 435 EMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNAS 494
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
+ + + +V +V +Y ++ID FCKV ++ +A + EM APN+VT+
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM-VE 353
LI + K ++ EL M+L G P+ T+ ++ID C++ + E A + M
Sbjct: 555 ALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGN 614
Query: 354 WGVP---------------PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+P PN TY L+ LC V + L M + P+ +
Sbjct: 615 ADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVY 674
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+ALI FC++ K+++A+ F M G P+ ++YS+LI L K R D A + M +
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
N C P+ +++ L + G+ +EA+ ++ +E+G
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKG 771
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 152/377 (40%), Gaps = 88/377 (23%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y A++D L K++ + A MSV+ C+P+ Y+ LI G C++G +DEA +
Sbjct: 634 PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693
Query: 68 VKQMEGLGYAPNVYTY-----------------------------------TILIDGFCN 92
+M GY PNVYTY T +IDG C
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
+ E +R++ +M+E+ PN T +++ G + K EL
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLEL--------------- 798
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT-CLVTGLDLNETCGILDTF 211
+R+MG +G P T+ + C GL L++ +LD
Sbjct: 799 --------------------MRQMGAKGCAPNFVTYRVLINHCCAAGL-LDDAHQLLDEM 837
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+ + Y ++E + G L+ + ++ V + +Y ++ID FCK +
Sbjct: 838 KQTYWPKHMAGYRKVIEGFNREFIISLG--LLDEIAENVAVPIIPAYRILIDSFCKAGRL 895
Query: 272 DRATEICREMR--------DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
+ A E+ + M D+D+ +L+ +L S +V K EL +++ G P
Sbjct: 896 ELALELHKXMSSCTSYSAADKDLYSSLIESLSLAS------KVDKAFELYADMIKRGGIP 949
Query: 324 DKFTFNSMIDCLCRAHR 340
+ F ++ L R +R
Sbjct: 950 ELSIFFYLVKGLIRINR 966
>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
Length = 674
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 241/469 (51%), Gaps = 16/469 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I+ + ++P T YN V+ L + + A ++M + C P+ T+ I C+ G+
Sbjct: 210 IASMPVAPDTYTYNTVLKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGL 269
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM--KERNVCPNEATV 118
+D A+ L++QM G P+V Y+ L++GF RV + ++L M + VC N A
Sbjct: 270 LDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTMLCRPNTVCYNAALK 329
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
+ G + + EL+ + ++ +TL+ L N +A A +L +M
Sbjct: 330 GLCIAGRW-----DEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQK 384
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
GY+P+ +++ ++C ++ +L++ + KP ++ +++ L +A R +
Sbjct: 385 YGYMPDVVSYNTIISCFSEQACADDALKLLNSML---CKPDTISFNAVLKCLCRAERWYD 441
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + K+ +N ++N++ID C+ + A E+ M P++VT+++LI+
Sbjct: 442 AAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLIN 501
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G + + K L + C + D F++N+ + LC A R++DA + +++MV P
Sbjct: 502 GFSEQG-LDKVAFDLFRSMPC--RADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLP 558
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N +T+NILI SLC G V R++ ++++M I+PDI+T+NALI + ++ A K F
Sbjct: 559 NEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALK-F 617
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
S T+ PD SY++++K L ++ R+ +A++ M + C P+ T
Sbjct: 618 LS--TMPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVT 664
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 226/458 (49%), Gaps = 13/458 (2%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D ++N L+ G CR G + +A R+++ G A NV TYT LIDG+C + R+ + R++
Sbjct: 152 DAVSHNTLVAGYCRDGSLWDAERVLEAARASG-AANVVTYTALIDGYCRSGRLTDALRLI 210
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
M V P+ T +++ G+ +A EL+ + ++ T + N
Sbjct: 211 ASMP---VAPDTYTYNTVLKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQN 267
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
+ A +L +M G +P+ + V +++ +L T + R P Y
Sbjct: 268 GLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTMLCR---PNTVCY 324
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
++ L AGR E + + + N +++ +I+ C+ + + A E+ +M+
Sbjct: 325 NAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQK 384
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
P++V++NT+IS + A +LL +L KPD +FN+++ CLCRA R+ D
Sbjct: 385 YGYMPDVVSYNTIISCFSEQACADDALKLLNSML---CKPDTISFNAVLKCLCRAERWYD 441
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A + +++M++ N +T+NILI SLC G V ++ +F+ M R +PDI T+++LI
Sbjct: 442 AAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLIN 501
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
F + A F SM R D FSY+A +K L + R+D+A + M C P
Sbjct: 502 GFSEQGLDKVAFDLFRSM---PCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLP 558
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ T N+++ +L Q+G A ++ + + GI+ F
Sbjct: 559 NEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIF 596
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 174/366 (47%), Gaps = 15/366 (4%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S + P+T YNA + L + D +M C P+ T++ LI+ +C+ +
Sbjct: 312 LSTMLCRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRL 371
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVR 119
+ A+ +++QM+ GY P+V +Y +I F + ++L M +C P+ +
Sbjct: 372 AEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSM----LCKPDTISFN 427
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+++ + R + A EL+ + ++ + T ++ N L+ L N +A + M
Sbjct: 428 AVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKY 487
Query: 180 GYLPESSTFDYTVTCLV-TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-DV 237
P+ T+ + GLD D F + +Y ++ L A R D
Sbjct: 488 RCTPDIVTYSSLINGFSEQGLDK----VAFDLFRSMPCRADIFSYNATLKGLCMAARWDD 543
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
G+ + V KD L + V ++N++I+ C+ +++RA E+ +M I P++ T+N LI
Sbjct: 544 AGELIADMVTKDCLPNEV-TFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALI 602
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
+G+ + + + L + +PD ++NS++ LCRA R++DA ++EM+
Sbjct: 603 NGYSEQGCLDDALKFLSTM---PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCT 659
Query: 358 PNTITY 363
PN +T+
Sbjct: 660 PNEVTF 665
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 5/133 (3%)
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
PP IT NILI+ LCA +A + R+ + ++ + D + N L+ +CR + AE+
Sbjct: 116 PPAVITCNILIKKLCARRRLADAERVLEALKTSGAA-DAVSHNTLVAGYCRDGSLWDAER 174
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
+ G + +Y+ALI +SGR +A + SM PD+YT N +L+ L
Sbjct: 175 VLEAARASGA-ANVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKGLC 230
Query: 477 QQGRFEEAHDIVK 489
++EEA ++++
Sbjct: 231 FAKQWEEAEELMR 243
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ +N +I++L + ++ A ++QM PD FTYN LI+G G +D+AL+
Sbjct: 558 PNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKF 617
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+ M P+ +Y ++ G C A+R + +++ M +N PNE T +
Sbjct: 618 LSTMPC---EPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFK 666
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/491 (27%), Positives = 230/491 (46%), Gaps = 7/491 (1%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN +ID K +D A+ ++M P+ T+N L+ G+C++ + EA L+K+ME
Sbjct: 249 YNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEME 308
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G+ P+ YTY+IL DG + E E+ + N T L++G+ +
Sbjct: 309 VNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVE 368
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
KA E+L +F E + +++ NT + ++A + +M G P S TF+ +
Sbjct: 369 KAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLI 428
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR---YLNHVFKD 249
++++ + ++GV P TY L++ G+ DR L + +
Sbjct: 429 DKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGY---GKLCTFDRCFQILEQMEEI 485
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
+ NV SY +I+C CK + A + R+M R + PN +N LI G C +V
Sbjct: 486 GVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDA 545
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
++ P T+N +ID LC+ + +A D L+++ G P+ ITYN LI
Sbjct: 546 LRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISG 605
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
G+V++ L L++ M+ I P + T++ LI S C IE EK + ML + L PD
Sbjct: 606 YANAGNVSKCLGLYETMKNLGIKPTVRTYHPLI-SGCSKEGIELVEKLYNEMLQMNLLPD 664
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
Y+A+I + G +A M G +PD T N ++ ++G+ D+V
Sbjct: 665 RVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVN 724
Query: 490 TSKERGISFKS 500
K + ++ K+
Sbjct: 725 NMKAKELAPKA 735
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/492 (25%), Positives = 223/492 (45%), Gaps = 35/492 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G T +Y I A VK ++ + M +P+ F YN+LI G+CR + +A
Sbjct: 171 GFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDA 230
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +M + ++ TY LIDG+C + F++ E MKE++V PN T SL+ G
Sbjct: 231 EKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSG 290
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +R M+ EA ++L++M G++P+
Sbjct: 291 LCK-----------MRKMK------------------------EARSLLKEMEVNGFMPD 315
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ L+ D N + + ++G++ T +L+ L K G+ + + L
Sbjct: 316 GYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILK 375
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
++ LV++ YN ++ +C++ M++A M + PN +TFN+LI C
Sbjct: 376 KFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMK 435
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E+ K E + + E G P T+N++ID + F+ L +M E GV PN ++Y
Sbjct: 436 EMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYG 495
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI LC G + + + + M + P+ +N LI C + K++ A + F M+
Sbjct: 496 SLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRS 555
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ P +Y+ LI L K G+ EA+ + +G +PD T N ++ G +
Sbjct: 556 EISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKC 615
Query: 485 HDIVKTSKERGI 496
+ +T K GI
Sbjct: 616 LGLYETMKNLGI 627
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/526 (25%), Positives = 226/526 (42%), Gaps = 36/526 (6%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P+ +N+++ L K + A ++M V+ PD +TY+IL G+ R + A+
Sbjct: 277 VAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAM 336
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L +Q G N YT +IL++G C +V + +L+ E + +E + V+G
Sbjct: 337 ELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGY 396
Query: 126 FRCLDPHKAFELLIRFMEREPL-TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R D +KA L I ME L + N+L+ + + +A ++KM ++G P
Sbjct: 397 CRIGDMNKAI-LTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPS 455
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + IL+ + GVKP +Y L+ L K G+ +E + L
Sbjct: 456 VETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLR 515
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ N YNM+ID C V + A EM +I+P LVT+N LI G CK
Sbjct: 516 DMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKG 575
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMID----------CL------------------- 335
++ + + L + G PD T+NS+I CL
Sbjct: 576 KLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYH 635
Query: 336 -----CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
C E +EM++ + P+ + YN +I IG+ ++ L Q M
Sbjct: 636 PLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQG 695
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
I PD T+N+LI R K+ + +M L P +Y L+K F A
Sbjct: 696 IHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAY 755
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ M +N P++ N + L Q+GR +E I +GI
Sbjct: 756 VWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGI 801
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 128/259 (49%)
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
G +L+ + K + NV YN++I C+ + A ++ EM + ++ ++VT+NTLI
Sbjct: 195 GMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLID 254
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G+CK E+ ++ + E P+ TFNS++ LC+ + ++A L EM G P
Sbjct: 255 GYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMP 314
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ TY+IL L D ++ L+++ I + YT + L+ C+ K+EKAE+
Sbjct: 315 DGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEIL 374
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
GL D Y+ + + G ++A T ME G P+S T N +++
Sbjct: 375 KKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDM 434
Query: 479 GRFEEAHDIVKTSKERGIS 497
++A + VK E+G++
Sbjct: 435 KEMDKAEEWVKKMAEKGVT 453
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 124/273 (45%), Gaps = 35/273 (12%)
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
+M++ CK M+ A E+ MR P+LV+ + L S + + K +L + +
Sbjct: 110 DMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIEN 169
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT------------------ 360
GF+ D F + I + + ++ L M + GV PN
Sbjct: 170 SGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRD 229
Query: 361 -----------------ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
+TYN LI C +G++ + ++ ++M+ ++P+I TFN+L+
Sbjct: 230 AEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLS 289
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
C+M K+++A M G PD ++YS L L++ + A + + + G
Sbjct: 290 GLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRI 349
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++YT +++L L +QG+ E+A +I+K E G+
Sbjct: 350 NNYTGSILLNGLCKQGKVEKAEEILKKFTENGL 382
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 129/311 (41%), Gaps = 9/311 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ Y ++I+ L K I A + + M P+ YN+LI G C +G V +
Sbjct: 485 IGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKD 544
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
ALR +M +P + TY +LIDG C ++ E L + P+ T SL+
Sbjct: 545 ALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLIS 604
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR---- 179
G + K L + + L K T Y + + E ++ K+ +
Sbjct: 605 GYANAGNVSKCLGL---YETMKNLGIKPTVRT--YHPLISGCSKEGIELVEKLYNEMLQM 659
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
LP+ ++ + C + + + + +G+ P TY L+ ++ G+
Sbjct: 660 NLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNI 719
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+N++ L ++Y++++ C + A REM + + PN N L +G
Sbjct: 720 KDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAG 779
Query: 300 HCKDAEVHKTR 310
++ + + +
Sbjct: 780 LEQEGRLQEVQ 790
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 1/179 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGI P+ R Y+ +I K I+L + +M PDR YN +IH IG +
Sbjct: 625 LGIKPTVRTYHPLISGCSKE-GIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQK 683
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L + M G P+ TY LI G +++ + ++ MK + + P T LV
Sbjct: 684 AYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVK 743
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G D A+ +E L +CN L L E I +M +G +
Sbjct: 744 GHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGII 802
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 77/196 (39%), Gaps = 2/196 (1%)
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
T NTL + KD E ++ L +LL+ ++ + + F D S
Sbjct: 40 TQNTLSNNSSKDQERYEQVNKLQILLQQNCNEAAYSLAKSL--ILTKSTFSSPSDLFSCF 97
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
+P ++L+ C + ++ L++ M+ D P + + + L +
Sbjct: 98 SACSIPLRITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQF 157
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
K F + G R D F Y+ I+A +K + SM + G P+ + N++
Sbjct: 158 VKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVL 217
Query: 472 LETLVQQGRFEEAHDI 487
+ L ++ R +A +
Sbjct: 218 IGGLCREKRIRDAEKM 233
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 218/501 (43%), Gaps = 44/501 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I G P+ R+YN ++DAL+ N + + M D P+ FTYNIL+ +C+
Sbjct: 135 IGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDR 194
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD A +L +M G P+ TYT ++ C A ++ +
Sbjct: 195 VDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDD---------------------- 232
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
A EL RF P V N L+ + A +L +M D G
Sbjct: 233 -------------ARELAGRFKPSVP-----VYNALIDGMCKEGRIEVAIKLLGEMMDNG 274
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P ++ + L ++ + RG T+ L++ + G+ E
Sbjct: 275 VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEAL 334
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ +D NV +YN +I C ++ A ++C +M+ PN+ T++ LI G
Sbjct: 335 DLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGF 394
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K ++ E ++ G +P+ T+ M+D LC+ F+ A + +M G PNT
Sbjct: 395 AKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNT 454
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
IT+N I+ LC G V +++L ++MQ P+I T+N L+ + RMNK E+A F
Sbjct: 455 ITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQE 514
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+ L+P+ +Y+ ++ ++G EA Q F G PDS T N ++ +QG+
Sbjct: 515 IEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGK 574
Query: 481 FEEAHDIVKTSKERGISFKSF 501
+ A +V ER S K +
Sbjct: 575 VKIAAQLV----ERVSSMKEW 591
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/487 (22%), Positives = 210/487 (43%), Gaps = 44/487 (9%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVD--QCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
Y +I+ L + +D+ QQM +D C D F +I+G R+G ++AL++ +
Sbjct: 77 YRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFI--CIINGYKRVGSAEQALKMFYR 134
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
+ G P V Y L+D + + + + MK+ + PN T
Sbjct: 135 IGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTY------------ 182
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
N LL L N A + +M ++G P++ T+
Sbjct: 183 -----------------------NILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTT 219
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
V+ L +++ + F KP Y L++ + K GR + L + +
Sbjct: 220 MVSSLCKAGKIDDARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNG 274
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+ NV SY+ +I+ C ++ A + +M R N+ TF LI G ++++
Sbjct: 275 VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEAL 334
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+L ++++ G +P+ +N++I LC E+AL +M G PN TY+ILI
Sbjct: 335 DLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGF 394
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
GD+ + + +M + P++ T+ ++ C+ + ++A M G P+
Sbjct: 395 AKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNT 454
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+++ IK L +GR + A + M+ +GC P+ T N +L+ L + ++EEA + +
Sbjct: 455 ITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQE 514
Query: 491 SKERGIS 497
+ R +
Sbjct: 515 IEARNLQ 521
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 169/365 (46%), Gaps = 1/365 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y+ +I++L S +++LA+ F QM + C + T+ LI G G + EA
Sbjct: 274 GVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA 333
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L K M G PNV Y LI G C+ + E +V + M+ PN T L+ G
Sbjct: 334 LDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDG 393
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D A E R + + ++ L NSM +A +++ KM G P
Sbjct: 394 FAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPN 453
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ TF+ + L + +L+ G P +TY L++AL++ + E
Sbjct: 454 TITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQ 513
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L N+ +YN V+ F + MM A ++ + R AP+ +T+NT+I +CK
Sbjct: 514 EIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQG 573
Query: 305 EVHKTRELLVMLLECG-FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V +L+ + + PD T+ S+I C E+A+ L + + G+ PN T+
Sbjct: 574 KVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATW 633
Query: 364 NILIR 368
N L+R
Sbjct: 634 NALVR 638
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 196/469 (41%), Gaps = 70/469 (14%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTY---------------- 48
G+ P+ YN ++ AL K++ +D A+ F +MS C PD TY
Sbjct: 174 GLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA 233
Query: 49 --------------NILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAK 94
N LI G+C+ G ++ A++L+ +M G PNV +Y+ +I+ C +
Sbjct: 234 RELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSG 293
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCN 154
V F + M R N T L+ G F ++A +L ++ + N
Sbjct: 294 NVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYN 353
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
TL++ L +N EA + +M G LP +T+ + DL + I
Sbjct: 354 TLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISH 413
Query: 215 GVKPRFSTYLLLMEALYKA-----------------------------------GRDVEG 239
G +P TY +++ L K GR
Sbjct: 414 GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWA 473
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ L + + N+ +YN ++D ++N + A + +E+ R++ PNLVT+NT++ G
Sbjct: 474 MKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYG 533
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA---LDCLSEMVEWGV 356
+ + + +L L G PD T+N+MI C+ + + A ++ +S M EW
Sbjct: 534 FSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEW-- 591
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
P+ ITY LI C ++ ++ K I P+ T+NAL++ F
Sbjct: 592 HPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 186/415 (44%), Gaps = 7/415 (1%)
Query: 82 TYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF 141
TY ++I+ + V +L+ MK + E +++G R +A ++ R
Sbjct: 76 TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135
Query: 142 MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
E + N LL L + + + M G +P T++ + L +
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195
Query: 202 NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
+ + +G P TY ++ +L KAG+ ++ R L FK +V YN +
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGK-IDDARELAGRFK----PSVPVYNAL 250
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
ID CK ++ A ++ EM D + PN+V+++ +I+ C V L + G
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310
Query: 322 KPDKFTFNSMI-DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
+ TF +I C R +E ALD M++ G PN + YN LI LC+ G + +L
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYE-ALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEAL 369
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
++ +MQ P++ T++ LI F + + A + + M++ G RP+ +Y+ ++ L
Sbjct: 370 QVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVL 429
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
K+ FD+A M GC P++ T N ++ L GR E A +++ + G
Sbjct: 430 CKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHG 484
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 120/248 (48%), Gaps = 5/248 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y ++D L K++ D A ++M+++ C P+ T+N I G+C G V+ A
Sbjct: 414 GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWA 473
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+++M+G G PN+ TY L+D + E F + + ++ RN+ PN T ++++G
Sbjct: 474 MKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYG 533
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD-RGYLP 183
R +A +L + + R + NT+++ AA ++ ++ + + P
Sbjct: 534 FSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHP 593
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ + +++ E LD I +G+ P F+T+ AL + D G
Sbjct: 594 DIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATW----NALVRCFFDSLGHMGP 649
Query: 244 NHVFKDRL 251
H+ D L
Sbjct: 650 IHILDDIL 657
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 81/169 (47%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
F+ T+ MI+ L R + L +M G+ + +I +G ++
Sbjct: 69 AFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQA 128
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
L++F ++ P + +N L+ + NK + + +M GL P+ F+Y+ L+KA
Sbjct: 129 LKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKA 188
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
L K+ R D A + F+ M GC PD+ T ++ +L + G+ ++A ++
Sbjct: 189 LCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELA 237
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 216/460 (46%), Gaps = 2/460 (0%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGY--APNVYTYTILIDGFCNAKRVAE 98
C PD F+YNIL+ +C G +A L++ M G +P+V Y +IDGF V +
Sbjct: 180 CVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNK 239
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
+ + M +R + P+ T S+VH + + KA L + + + L N L+Y
Sbjct: 240 ACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIY 299
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
S+ EA + ++M + LP+ + + L + E + DT +G P
Sbjct: 300 GYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNP 359
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
+Y +++ G V+ + + D + + ++N++I + M+D+A I
Sbjct: 360 DVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIF 419
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
EMRD + P++VT+ T+I+ C+ ++ E +++ G PDK+ ++ +I C
Sbjct: 420 NEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTH 479
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
A + +SE++ G+ + + + +I +LC +G V + +F + PD +
Sbjct: 480 GSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVY 539
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
N L+ +C + K+EKA + F +M++ G+ P+ Y L+ K GR DE F M Q
Sbjct: 540 NMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQ 599
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
G P + N+I++ L + GR A E GI+
Sbjct: 600 KGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAM 639
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 219/486 (45%), Gaps = 51/486 (10%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP YN VID K ++ A F++M PD TY+ ++H +C+ +D+A
Sbjct: 218 SPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEA 277
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++QM G P+ +TY LI G+ + + E RV + M+ +++ P+ +
Sbjct: 278 FLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVAL-------- 329
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
NTL+ L EA + M +G P+
Sbjct: 330 ---------------------------NTLMGSLCKYGKIKEARDVFDTMAMKGQNPD-- 360
Query: 187 TFDYTVT--------CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
F YT+ CLV DL D + G+ P T+ +L++A G +
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDL------FDLMLGDGIAPVICTFNVLIKAYANCGMLDK 414
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
N + + +V +Y VI C++ MD A E +M D+ + P+ ++ LI
Sbjct: 415 AMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQ 474
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G C + K +EL+ ++ G + D F S+I+ LC+ R DA + V G+ P
Sbjct: 475 GFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHP 534
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ + YN+L+ C +G + ++LR+F M + I P++ + L+ +C++ +I++ F
Sbjct: 535 DAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLF 594
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
ML G++P Y+ +I L ++GR AK F M ++G + T +++L L +
Sbjct: 595 REMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKN 654
Query: 479 GRFEEA 484
F+EA
Sbjct: 655 RCFDEA 660
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 144/540 (26%), Positives = 238/540 (44%), Gaps = 45/540 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P Y++V+ AL K+ ++D A +QM PD +TYN LI+G G EA
Sbjct: 251 GIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEA 310
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+R+ K+M P+V L+ C ++ E V + M + P+ + +++G
Sbjct: 311 VRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNG 370
Query: 125 VFR--CL-DPHKAFELLIRFMEREPLTQKLVC--NTLLYRLSNNSMASEAAAILRKMGDR 179
CL D F+L++ ++C N L+ +N M +A I +M D
Sbjct: 371 YATKGCLVDMTDLFDLML-----GDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDH 425
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP----------RFSTYLLLMEA 229
G P T+ + L +++ + I +GV P F T+ L++A
Sbjct: 426 GVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKA 485
Query: 230 -------------------------LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
L K GR ++ + L + YNM++D
Sbjct: 486 KELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDG 545
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
+C V M++A + M I PN+V + TL++G+CK + + L +L+ G KP
Sbjct: 546 YCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 605
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
+N +ID L A R A EM E G+ N TY+I++R L ++ LF+
Sbjct: 606 TILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFK 665
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+++A + DI T N +I + ++E+A+ F S+ GL P +YS +I LIK G
Sbjct: 666 ELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEG 725
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFPGL 504
+EA+ F SM+ GC PDS N ++ L+++ A + ER S + +
Sbjct: 726 LVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAM 785
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 175/404 (43%), Gaps = 6/404 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P +N +I A +D A + F +M KP TY +I +CRIG +D+A
Sbjct: 391 GIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDA 450
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ QM G P+ Y Y LI GFC + + ++ + + + S+++
Sbjct: 451 MEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINN 510
Query: 125 V---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ R +D F+L + + P +V N L+ +A + M G
Sbjct: 511 LCKLGRVMDAQNIFDLTVN-VGLHP--DAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 567
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P + V ++E + +++G+KP Y ++++ L++AGR V
Sbjct: 568 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + + + N +Y++V+ K D A + +E+R ++ +++T NT+I+G
Sbjct: 628 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 687
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ V + ++L + G P T++ MI L + E+A D S M G P++
Sbjct: 688 QTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSR 747
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
N ++R L ++ R+ K+ S + T L+ F
Sbjct: 748 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLF 791
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 101/248 (40%), Gaps = 73/248 (29%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV---------------------------- 352
P +T+ ++DC RAHR E AL +++
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168
Query: 353 --------EWGVPPNTITYNILIRSLC--------------------------------- 371
E G P+ +YNIL++SLC
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228
Query: 372 ----AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
GDV ++ LF++M I PD+ T+++++ + C+ ++KAE M+ G+
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PDN++Y+ LI +G++ EA + F M + PD N ++ +L + G+ +EA D+
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348
Query: 488 VKTSKERG 495
T +G
Sbjct: 349 FDTMAMKG 356
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 102/248 (41%), Gaps = 10/248 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P +YN ++D ++ A F M +P+ Y L++G C+IG +DE
Sbjct: 530 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 589
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L L ++M G P+ Y I+IDG A R M E + N+ T ++
Sbjct: 590 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLR 649
Query: 124 GVF--RCLDPHKAFELLIRFMEREPLTQK---LVCNTLLYRLSNNSMASEAAAILRKMGD 178
G+F RC D E + F E + K + NT++ + EA + +
Sbjct: 650 GLFKNRCFD-----EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISR 704
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G +P + T+ +T L+ + E + + G +P ++ L K V
Sbjct: 705 SGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVR 764
Query: 239 GDRYLNHV 246
YL+ +
Sbjct: 765 AGAYLSKI 772
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSL--------CAIGD---VARSLRLFQKMQA 388
R E+A D L E+ G P N + +L C G VA R + Q
Sbjct: 46 RPEEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFNRAASRAQG 105
Query: 389 DRI-SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
R+ SP YT+ L+ R ++ E A F +L GLR D S L+K ++ R D
Sbjct: 106 PRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTD 165
Query: 448 EAKQTFLS-MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
EA L + GC PD ++ N++L++L QG+ +A D+++ E G
Sbjct: 166 EALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGG 214
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 97/239 (40%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ Y +++ K ID F++M KP YNI+I G+ G A
Sbjct: 566 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 625
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+M G A N TY+I++ G + E + + ++ NV + T+ +++ G
Sbjct: 626 KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 685
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F+ +A +L + + + ++ L + EA + M + G P+
Sbjct: 686 MFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 745
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
S ++ V L+ ++ L +R T +LL++ G E R+L
Sbjct: 746 SRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 219/478 (45%), Gaps = 35/478 (7%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP+ YN VID K ++ A F++M PD TYN ++H +C+ +D+A
Sbjct: 229 SPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEA 288
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++QM PN +TY LI G+ + + E RV + M+ ++ P+ T+
Sbjct: 289 FLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL-------- 340
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ L+ L EA + M +G P+
Sbjct: 341 ---------------------------SMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 373
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+++ + T L + + D + G+ P F T+ +L++A G + N +
Sbjct: 374 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 433
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ +V +Y VI C++ MD A E +M D+ +AP+ +N LI G C +
Sbjct: 434 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSL 493
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
K +EL+ ++ G D F+S+I+ LC+ R DA + V G+ P+ + Y++L
Sbjct: 494 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSML 553
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ C +G + ++LR+F M + I P++ + L+ +C++ +I++ F ML G+
Sbjct: 554 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGI 613
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+P YS +I L ++GR AK F M ++G D T N++L L + F+EA
Sbjct: 614 KPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEA 671
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 216/460 (46%), Gaps = 2/460 (0%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGY--APNVYTYTILIDGFCNAKRVAE 98
C PD F+Y+IL+ +C G +A L++ M G +PNV Y +IDGF V +
Sbjct: 191 CVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNK 250
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
+ + M +R + P+ T S+VH + + KA L + + + L N L+Y
Sbjct: 251 ACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIY 310
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
S+ EA + ++M LP+ T + L + E + DT +G P
Sbjct: 311 GYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP 370
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
+Y +++ G V+ + + D + + ++N++I + M+D+A I
Sbjct: 371 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIF 430
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
EMRD + P++VT+ T+I+ C+ ++ E +++ G PDK+ +N +I C
Sbjct: 431 NEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTH 490
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
A + +SE++ G+ + + ++ +I +LC +G V + +F + PD +
Sbjct: 491 GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVY 550
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+ L+ +C + K+EKA + F +M++ G+ P+ Y L+ K GR DE F M Q
Sbjct: 551 SMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQ 610
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
G P + ++I++ L Q GR A E GI+
Sbjct: 611 RGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAM 650
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 139/539 (25%), Positives = 245/539 (45%), Gaps = 43/539 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P YN+V+ AL K+ ++D A +QM + P+ +TYN LI+G G EA
Sbjct: 262 GIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEA 321
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+R+ K+M P+V T ++L+ C ++ E V + M + P+ + +++G
Sbjct: 322 VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNG 381
Query: 125 VFR--CL-DPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRG 180
CL D F+L++ + + N L+ +N M +A I +M D G
Sbjct: 382 YATKGCLVDMTDLFDLMLG----DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 437
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T+ + L +++ + I +GV P Y L++ G ++
Sbjct: 438 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAK 497
Query: 241 R----------YLNHVFKDRLVSN-----------------VNS--------YNMVIDCF 265
+L+ VF +++N VN Y+M++D +
Sbjct: 498 ELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGY 557
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C V M++A + M I PN+V + TL++G+CK + + L +L+ G KP
Sbjct: 558 CLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPST 617
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
++ +ID L +A R A EM E G+ + TYNI++R L ++ LF++
Sbjct: 618 ILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKE 677
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
++A + +I T N +I + ++E+A+ F S+ L P+ +YS +I LIK G
Sbjct: 678 LRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGL 737
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFPGL 504
+EA+ F SM+ GC P+S N ++ L+++ A + ER S + +
Sbjct: 738 VEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAM 796
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 177/404 (43%), Gaps = 6/404 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P +N +I A +D A + F +M KPD TY +I +CRIG +D+A
Sbjct: 402 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 461
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ QM G AP+ Y Y LI GFC + + ++ + + + S+++
Sbjct: 462 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 521
Query: 125 V---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ R +D F+L + + P +V + L+ +A + M G
Sbjct: 522 LCKLGRVMDAQNIFDLTVN-VGLHP--DAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 578
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P + V ++E + ++RG+KP Y ++++ L++AGR V
Sbjct: 579 EPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKM 638
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + + + ++ +YN+V+ K D A + +E+R ++ N++T NT+I G
Sbjct: 639 KFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMF 698
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ V + ++L + P+ T++ MI L + E+A D S M G PN+
Sbjct: 699 QTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSR 758
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
N ++R L ++ R+ K+ S + T L+ F
Sbjct: 759 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLF 802
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 144/321 (44%), Gaps = 38/321 (11%)
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
R + P TY +LM+ +A R + + + L N+ N +++ FC+ D
Sbjct: 118 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 177
Query: 274 ATEI------------------------CREMRDRDI--------------APNLVTFNT 295
A +I C + + +PN+V +NT
Sbjct: 178 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 237
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
+I G K+ +V+K +L +++ G PD T+NS++ LC+A + A L +MV
Sbjct: 238 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 297
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
V PN TYN LI + G ++R+F++M+ I PD+ T + L+ S C+ KI++A
Sbjct: 298 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 357
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
F +M G PD FSY+ ++ G + F M +G PD YT N++++
Sbjct: 358 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY 417
Query: 476 VQQGRFEEAHDIVKTSKERGI 496
G ++A I ++ G+
Sbjct: 418 ANCGMLDKAMIIFNEMRDHGV 438
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 98/239 (41%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ +Y +++ K ID F++M KP Y+I+I G+ + G A
Sbjct: 577 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPA 636
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+M G A ++ TY I++ G + E + + ++ NV N T+ +++ G
Sbjct: 637 KMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 696
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F+ +A +L + + + ++ L + EA + M + G P
Sbjct: 697 MFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 756
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
S ++ V L+ ++ L +R T +LL++ G E R+L
Sbjct: 757 SRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 815
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 216/467 (46%), Gaps = 36/467 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P + +N ++ +V S+S + + F + + + D +++ I+I G C G ++++
Sbjct: 124 GFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKI-KVVLDVYSFGIVIKGCCEAGEIEKS 182
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ ++ G++PNV YT LIDG C + + + M + + NE T L+HG
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F+ N + + + KM + G P
Sbjct: 243 LFK-----------------------------------NGIKKQGFEMYEKMQEHGVFPN 267
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L + + D +RGV TY L+ L + + E ++ ++
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMD 327
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N+ +YN +ID FC V + +A +CR+++ R ++P+LVT+N L+SG C+
Sbjct: 328 QMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKG 387
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +++ + E G KP K T+ +ID R+ E A+ S M E G+ P+ TY+
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYS 447
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI C G + + RLF+ M + P+ +N +I +C+ +A + F M
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEK 507
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
L P+ SYS LI+ L K + EA+ M +G +P NLI
Sbjct: 508 ELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLI 554
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/487 (23%), Positives = 214/487 (43%), Gaps = 36/487 (7%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
+RLY +I+A V+S S+D + F +M P +N L+ + ++
Sbjct: 94 SRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFN 153
Query: 70 QMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
+ + + +VY++ I+I G C A + + F +L ++E PN +L+ G +
Sbjct: 154 ESK-IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKG 212
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
+ KA +L + + + L++ L N + + + KM + G
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHG--------- 263
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
V P TY +M L K GR + + + + +
Sbjct: 264 --------------------------VFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRER 297
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
+ N+ +YN +I C+ + A ++ +M+ I PNL+T+NTLI G C ++ K
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKA 357
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
L L G P T+N ++ CR A + EM E G+ P+ +TY ILI +
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
++ +++L M+ + PD++T++ LI FC ++ +A + F SM+ L P+
Sbjct: 418 FARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPN 477
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
Y+ +I K G A + F ME+ P+ + + ++ L ++ + +EA D+V+
Sbjct: 478 EVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVE 537
Query: 490 TSKERGI 496
+ GI
Sbjct: 538 KMIDSGI 544
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 189/367 (51%), Gaps = 2/367 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G SP+ +Y +ID K I+ A F +M + +TY +LIHG+ + G+ +
Sbjct: 192 FGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQ 251
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ ++M+ G PN+YTY +++ C R + F+V + M+ER V N T +L+
Sbjct: 252 GFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIG 311
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ R + ++A +++ + M+ + L+ NTL+ + +A ++ R + RG
Sbjct: 312 GLCREMKANEANKVMDQ-MKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLS 370
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T++ V+ D + ++ +RG+KP TY +L++ ++ +
Sbjct: 371 PSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQL 430
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + + LV +V++Y+++I FC M+ A+ + + M ++ + PN V +NT+I G+CK
Sbjct: 431 RSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCK 490
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ ++ L + E P+ +++ +I LC+ + ++A D + +M++ G+ P+
Sbjct: 491 EGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTI 550
Query: 363 YNILIRS 369
N++ R+
Sbjct: 551 CNLISRA 557
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 146/285 (51%)
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
K G+ TY +L+ L+K G +G + + + N+ +YN V++ CK
Sbjct: 226 KFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTK 285
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A ++ EMR+R ++ N+VT+NTLI G C++ + ++ +++ + P+ T+N++I
Sbjct: 286 DAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLI 345
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
D C + AL ++ G+ P+ +TYN+L+ C GD + + ++ ++M+ I
Sbjct: 346 DGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
P T+ LI +F R + +E A + SM LGL PD +YS LI G+ +EA +
Sbjct: 406 PSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
F SM + P+ N ++ ++G A + + +E+ ++
Sbjct: 466 FKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELA 510
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 124/256 (48%), Gaps = 1/256 (0%)
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
Y N + V N +N ++ + ++ E + + + ++ +F +I G C
Sbjct: 116 YFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIK-VVLDVYSFGIVIKGCC 174
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ E+ K+ +LLV L E GF P+ + ++ID C+ E A D EM ++G+ N
Sbjct: 175 EAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEW 234
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY +LI L G + +++KMQ + P++YT+N ++ C+ + + A K F M
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEM 294
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G+ + +Y+ LI L + + +EA + M+ NP+ T N +++ G+
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKL 354
Query: 482 EEAHDIVKTSKERGIS 497
+A + + K RG+S
Sbjct: 355 GKALSLCRDLKSRGLS 370
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 227/481 (47%), Gaps = 37/481 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P +Y+ +++A + A + + C D N++++ IC G VD+A
Sbjct: 152 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKA 211
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L++ + G P+V +Y ++ G C AKR V ++E M PN T
Sbjct: 212 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTF------ 265
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
NTL+ L N + +L +M + G P+
Sbjct: 266 -----------------------------NTLISYLCRNGLFERVHEVLAQMAEHGCTPD 296
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + L IL+ G+KP Y L++ L A R E + L
Sbjct: 297 IRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 356
Query: 245 HVF-KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+F KD + +V ++N+++D FC+ ++DR E+ +M P+++T+ T+I+G CK+
Sbjct: 357 EMFDKDCPLDDV-TFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKE 415
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + LL + CG KP+ ++ ++ LC A R+ DA D +S+M++ G P N IT+
Sbjct: 416 GLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 475
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI LC G V +++ L ++M + SPD+ +++ +I + K ++A + M+
Sbjct: 476 NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 535
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ P+ YS++ AL + GR ++ Q F +++ D+ N ++ +L ++G E
Sbjct: 536 KGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETER 595
Query: 484 A 484
A
Sbjct: 596 A 596
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 211/453 (46%), Gaps = 12/453 (2%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGIC---RIGVVDEALRLVKQ 70
N V++A+ S+D A + + C+PD +YN ++ G+C R G V E L+++
Sbjct: 196 NLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQE---LMEE 252
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M + PN+ T+ LI C V VL M E P+ +++ G+ C +
Sbjct: 253 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGI--CKE 310
Query: 131 PH--KAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
H A E+L R M L +VC NTLL L + E +L +M D+ + T
Sbjct: 311 GHLKVAHEILNR-MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVT 369
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
F+ V ++ +L+ + G P TY ++ K G E L +
Sbjct: 370 FNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMT 429
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
N SY +V+ C A ++ +M + N +TFNTLI+ CK V
Sbjct: 430 ACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVE 489
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ ELL +L G PD +++++ID L +A + ++AL+ L+ MV G+ PNTI Y+ +
Sbjct: 490 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIA 549
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+L G + + +++F +Q I D +NA+I S C+ + E+A + M++ G
Sbjct: 550 SALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCV 609
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
P+ +Y+ LI+ L G EA++ + G
Sbjct: 610 PNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/450 (24%), Positives = 195/450 (43%), Gaps = 38/450 (8%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
YN ++ G CR G ++ A RL + PN YTY ++ C R+A+ VL+ M
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
R P ++ R A +L R CN +L + +
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
+A +LR L +F G +P +Y ++
Sbjct: 210 KALHLLRD--------------------------------LPSF---GCEPDVVSYNAVL 234
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
+ L A R + + + N+ ++N +I C+ + +R E+ +M +
Sbjct: 235 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCT 294
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
P++ + T+I G CK+ + E+L + G KP+ +N+++ LC A R+E+ +
Sbjct: 295 PDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 354
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
L+EM + P + +T+NIL+ C G V R + L ++M PD+ T+ +I FC+
Sbjct: 355 LAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCK 414
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
I++A SM G +P+ SY+ ++K L + R+ +A+ M Q GC + T
Sbjct: 415 EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPIT 474
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERGIS 497
N ++ L ++G E+A +++K G S
Sbjct: 475 FNTLINFLCKKGLVEQAIELLKQMLVNGCS 504
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 80/170 (47%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N +I+ L K ++ A +QM V+ C PD +Y+ +I G+ + G DEAL L+ M
Sbjct: 475 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 534
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G +PN Y+ + R+ +V ++ + +++ + + +++ + + +
Sbjct: 535 NKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETE 594
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+A E L + + + L+ L++ EA +L ++ +G L
Sbjct: 595 RAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/581 (23%), Positives = 257/581 (44%), Gaps = 89/581 (15%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG PS YNA++ ++++ +D AYL ++MS D +T +H +C+ G E
Sbjct: 226 LGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWRE 285
Query: 64 ALRLVKQME-------------GLGYA-------------------PNVYTYTILIDGFC 91
AL L+++ E GL A PNV TY IL+ G
Sbjct: 286 ALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCL 345
Query: 92 NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF---------- 141
+++ R+L +M P+ SL+H R D A++LL +
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV 405
Query: 142 ----------------------MEREPLTQKLVCNTLLYRLSNNSMA---------SEAA 170
+ + + L + +L +++ +++A +A
Sbjct: 406 VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAY 465
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
+I+R+M +G++P++ST+ + L ++ + + V P TY +L+++
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSF 525
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
K G + ++ + + +D NV +Y +I + K M A E+ M PN+
Sbjct: 526 CKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNV 585
Query: 291 VTFNTLISGHCKDAEVHKTRELLVML--------LECGFK--------PDKFTFNSMIDC 334
VT+ LI GHCK ++ K ++ + ++ FK P+ FT+ +++D
Sbjct: 586 VTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDG 645
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LC+AH+ ++A D L M G PN I Y+ LI C +G + + +F KM P+
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+YT+++LI + +++ A K ML P+ Y+ +I L K G+ DEA +
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
ME+ GC+P+ T +++ + G+ ++ ++++ +G
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 218/489 (44%), Gaps = 34/489 (6%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
M + C P R +N LIH CR G A +L+K+M G P Y ILI G C
Sbjct: 357 LSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICG 416
Query: 93 AKRVAEVFRVLEI-------MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
+++ + VLE+ M + +V N+ V +L RCL FE + RE
Sbjct: 417 NEKLPSL-DVLELAEKAYGEMLDAHVVLNKVNVSNLA----RCLCGAGKFEKAYSII-RE 470
Query: 146 PLTQKLVCNTLLYR-----LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLD 200
+++ + +T Y L N S A + +M +P+ T+ +
Sbjct: 471 MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGL 530
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
L + D ++ G P TY L+ A KA + + + + + NV +Y
Sbjct: 531 LQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTA 590
Query: 261 VIDCFCKVNMMDRATEICREMR-DRDIA---------------PNLVTFNTLISGHCKDA 304
+ID CK +++A +I MR + DI PN+ T+ L+ G CK
Sbjct: 591 LIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAH 650
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V + R+LL ++ G +P+ ++++ID C+ + ++A ++M E G PN TY+
Sbjct: 651 KVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYS 710
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI L + +L++ +M + +P++ + +I C++ K ++A + M
Sbjct: 711 SLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEK 770
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G P+ +Y+A+I K+G+ D+ + M GC P+ T +++ G ++A
Sbjct: 771 GCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDA 830
Query: 485 HDIVKTSKE 493
H ++ K+
Sbjct: 831 HQLLDEMKQ 839
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 134/500 (26%), Positives = 220/500 (44%), Gaps = 24/500 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T Y+ VI L ++ +D A+L F++M + PD FTY ILI C++G++ +A
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQA 534
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G APNV TYT LI + A++++ + E+M PN T +L+ G
Sbjct: 535 RKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDG 594
Query: 125 VFRCLDPHKAFELLIRFME------------------REPLTQKLVCNTLLYRLSNNSMA 166
+ KA ++ R R+P L+ L
Sbjct: 595 HCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDP--NIFTYGALVDGLCKAHKV 652
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
EA +L M G P +D + L+E + +RG P TY L
Sbjct: 653 KEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSL 712
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ L+K R + L+ + ++ NV Y +ID CKV D A + M ++
Sbjct: 713 IDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGC 772
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN+VT+ +I G K +V K EL+ + G P+ T+ +I+ C A +DA
Sbjct: 773 HPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQ 832
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L EM + P + Y +I + SL L ++ + P I + LI SFC
Sbjct: 833 LLDEMKQTYWPKHMAGYRKVIEGFNR--EFIISLGLLDEIAENVAVPIIPAYRILIDSFC 890
Query: 407 RMNKIEKAEKAF--FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+ ++E A + S T D YS+LI++L + + D+A + + M + G P+
Sbjct: 891 KAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPE 950
Query: 465 SYTSNLILETLVQQGRFEEA 484
+++ L++ R+EEA
Sbjct: 951 LSIFFYLVKGLIRINRWEEA 970
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 132/577 (22%), Positives = 230/577 (39%), Gaps = 95/577 (16%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNIL------------------- 51
+L N +I ++ ++A + ++ KP R TYN L
Sbjct: 198 KLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHRE 257
Query: 52 ----------------IHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR 95
+H +C+ G EAL L+++ E + + YT +I G C A
Sbjct: 258 MSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEE---FKLDTVIYTQMISGLCEASL 314
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT 155
E L M+ + PN T R L+ G R + +L + + + N+
Sbjct: 315 FEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNS 374
Query: 156 LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT---------------------- 193
L++ + S A +L+KMGD G P ++ +
Sbjct: 375 LIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYG 434
Query: 194 -------------------CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
CL + I+ + +G P STY ++ L A
Sbjct: 435 EMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNAS 494
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
+ + + +V +V +Y ++ID FCKV ++ +A + EM APN+VT+
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM-VE 353
LI + K ++ EL M+L G P+ T+ ++ID C++ + E A + M
Sbjct: 555 ALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGN 614
Query: 354 WGVP---------------PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+P PN TY L+ LC V + L M + P+ +
Sbjct: 615 ADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVY 674
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+ALI FC++ K+++A+ F M G P+ ++YS+LI L K R D A + M +
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
N C P+ +++ L + G+ +EA+ ++ +E+G
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKG 771
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 164/393 (41%), Gaps = 91/393 (23%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y A++D L K++ + A MSV+ C+P+ Y+ LI G C++G +DEA +
Sbjct: 634 PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693
Query: 68 VKQMEGLGYAPNVYTY-----------------------------------TILIDGFCN 92
+M GY PNVYTY T +IDG C
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
+ E +R++ +M+E+ PN T +++ G + K EL
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLEL--------------- 798
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT-CLVTGLDLNETCGILDTF 211
+R+MG +G P T+ + C GL L++ +LD
Sbjct: 799 --------------------MRQMGAKGCAPNFVTYRVLINHCCAAGL-LDDAHQLLDEM 837
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+ + Y ++E + G L+ + ++ V + +Y ++ID FCK +
Sbjct: 838 KQTYWPKHMAGYRKVIEGFNREFIISLG--LLDEIAENVAVPIIPAYRILIDSFCKAGRL 895
Query: 272 DRATEICREMR--------DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
+ A E+ +EM D+D+ +L+ +L S +V K EL +++ G P
Sbjct: 896 ELALELHKEMSSCTSYSAADKDLYSSLIESLSLAS------KVDKAFELYADMIKRGGIP 949
Query: 324 DKFTFNSMIDCLCRAHRFEDAL---DCLSEMVE 353
+ F ++ L R +R+E+AL DC+ +MV
Sbjct: 950 ELSIFFYLVKGLIRINRWEEALQLSDCICQMVH 982
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 218/484 (45%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N ++ + K+ D A +M PD T+N+LI R G VD A+ LV M
Sbjct: 161 NIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMAN 220
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G P + TY ++ G C +R + V M + +V P+ + L+ G R + +
Sbjct: 221 RGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKE 280
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A + R + + L+ S A A LR+M G +P+ + +
Sbjct: 281 AVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIG 340
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
++E + D + G P TY L+ L K R ++ ++ LN + + +
Sbjct: 341 GFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTP 400
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
++ ++ +I +C+ + A ++ + + + P++VT+N+LI G C+ ++ K EL
Sbjct: 401 DLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELW 460
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ P+ T++ +ID C + EDA L EMV+ G PN TYN +I+ C
Sbjct: 461 DDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRS 520
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G+V + + QKM+ D + PD+ TFN LI + + + A F M +RPD +Y
Sbjct: 521 GNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTY 580
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ +I + G +A + F M +G PD YT ++ V G ++A +
Sbjct: 581 NMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIH 640
Query: 494 RGIS 497
RG +
Sbjct: 641 RGFA 644
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 212/458 (46%), Gaps = 2/458 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P +N +IDA ++ +D A M+ KP TYN ++ G+C+ D+A +
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEV 249
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ M+ AP+V ++ ILI GFC V E + + M+ R V P+ + L+ G+F
Sbjct: 250 FRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLI-GLFS 308
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLPESS 186
+R M+ L V T++ SEA + +M G LP+
Sbjct: 309 RRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVV 368
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + L L + +L+ +RGV P T+ L+ + G + + +
Sbjct: 369 TYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTL 428
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ RL +V +YN +ID C+ + +A E+ +M R+I PN +T++ LI HC+ +V
Sbjct: 429 LRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQV 488
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
L +++ G P+ T+NS+I CR+ + L +M + V P+ IT+N L
Sbjct: 489 EDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTL 548
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I ++ + +F M+ + + PD T+N +I F ++ A + F M G+
Sbjct: 549 IHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGI 608
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
PD ++Y +LI + +G +A Q M G PD
Sbjct: 609 EPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 197/428 (46%), Gaps = 4/428 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCK--PDRFTYNILIHGICRIGVVD 62
G+ P YN+V+ L K D A F+ M DQC PD ++NILI G CR+G V
Sbjct: 222 GLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTM--DQCSVAPDVRSFNILIGGFCRVGEVK 279
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA++ K+M+ P+V +++ LI F + L MK + P+ ++
Sbjct: 280 EAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVI 339
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G R +A + + L + NTLL L +A +L +M +RG
Sbjct: 340 GGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVT 399
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ TF + + + DT +++ ++P TY L++ + + G + +
Sbjct: 400 PDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANEL 459
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + ++ N +Y+++ID C+ ++ A EM + PN+ T+N++I G+C+
Sbjct: 460 WDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCR 519
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
V K ++ L + + PD TFN++I + A + + M + V P+ +T
Sbjct: 520 SGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVT 579
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN++I G++ + R+F+ M I PD YT+ +LI ++A + M+
Sbjct: 580 YNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMI 639
Query: 423 TLGLRPDN 430
G PD+
Sbjct: 640 HRGFAPDD 647
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 192/418 (45%)
Query: 78 PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFEL 137
P + +LI + +++ E F ++ + V + +L+ + R PH A E
Sbjct: 85 PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEA 144
Query: 138 LIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVT 197
+ + N +++ A ++ +M R P+ T + +
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFR 204
Query: 198 GLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNS 257
D++ ++D+ RG+KP TY +++ L K R + + + + +V S
Sbjct: 205 AGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRS 264
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
+N++I FC+V + A + +EM+ R + P++V+F+ LI + E+ L +
Sbjct: 265 FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMK 324
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
G PD + +I CRA +AL EMV +G P+ +TYN L+ LC +
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLL 384
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+ +L +M+ ++PD+ TF LI +CR E A + F ++L LRPD +Y++LI
Sbjct: 385 DAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLI 444
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ + G +A + + M P+ T ++++++ ++G+ E+A + ++G
Sbjct: 445 DGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKG 502
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 163/353 (46%), Gaps = 17/353 (4%)
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
C +LL R+S AS I+ + P+ FD + E +
Sbjct: 56 CQSLLLRMSRRRGASRRE-IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLL 114
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD--RLV----SNVNSY--NMVIDC 264
V S L+ L +AG H+ ++ RLV S VN+Y N+++
Sbjct: 115 DHRVPVPASASNALLAVLSRAG--------WPHLAQEAYRLVLSSDSEVNAYTLNIMVHS 166
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
+CK D A + EM R + P++VT N LI + +V L+ + G KP
Sbjct: 167 YCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPG 226
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
T+NS++ LC+ RF+ A + M + V P+ ++NILI C +G+V +++ ++
Sbjct: 227 IVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYK 286
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+MQ ++PD+ +F+ LI F R +++ A M LGL PD Y+ +I ++G
Sbjct: 287 EMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAG 346
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
EA + M GC PD T N +L L +Q R +A ++ +ERG++
Sbjct: 347 SMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVT 399
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 142/321 (44%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P +Y VI ++ S+ A +M C PD TYN L++G+C+ + +
Sbjct: 326 LGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLD 385
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +L+ +ME G P++ T+T LI G+C ++ + + + + P+ T SL+
Sbjct: 386 AEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLID 445
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R D KA EL RE L + + L+ +A L +M +G LP
Sbjct: 446 GMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLP 505
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + ++ + L + V P T+ L+ K
Sbjct: 506 NIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVF 565
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + K+ + + +YNM+I+ F + M A + + M D I P+ T+ +LI+GH
Sbjct: 566 NIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTA 625
Query: 304 AEVHKTRELLVMLLECGFKPD 324
+ +L ++ GF PD
Sbjct: 626 GNSKQAFQLHDEMIHRGFAPD 646
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 216/460 (46%), Gaps = 2/460 (0%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGY--APNVYTYTILIDGFCNAKRVAE 98
C PD F+Y+IL+ +C G +A L++ M G +PNV Y +IDGF V +
Sbjct: 178 CVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNK 237
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
+ + M +R + P+ T S+VH + + KA L + + + L N L+Y
Sbjct: 238 ACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIY 297
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
S+ EA + ++M LP+ T + L + E + DT +G P
Sbjct: 298 GYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP 357
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
+Y +++ G V+ + + D + + ++N++I + M+D+A I
Sbjct: 358 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIF 417
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
EMRD + P++VT+ T+I+ C+ ++ E +++ G PDK+ +N +I C
Sbjct: 418 NEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTH 477
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
A + +SE++ G+ + + ++ +I +LC +G V + +F + PD +
Sbjct: 478 GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVY 537
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+ L+ +C + K+EKA + F +M++ G+ P+ Y L+ K GR DE F M Q
Sbjct: 538 SMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQ 597
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
G P + ++I++ L Q GR A E GI+
Sbjct: 598 RGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAM 637
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 219/478 (45%), Gaps = 35/478 (7%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP+ YN VID K ++ A F++M PD TYN ++H +C+ +D+A
Sbjct: 216 SPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEA 275
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++QM PN +TY LI G+ + + E RV + M+ ++ P+ T+
Sbjct: 276 FLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL-------- 327
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ L+ L EA + M +G P+
Sbjct: 328 ---------------------------SMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 360
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+++ + T L + + D + G+ P F T+ +L++A G + N +
Sbjct: 361 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 420
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ +V +Y VI C++ MD A E +M D+ +AP+ +N LI G C +
Sbjct: 421 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSL 480
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
K +EL+ ++ G D F+S+I+ LC+ R DA + V G+ P+ + Y++L
Sbjct: 481 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSML 540
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ C +G + ++LR+F M + I P++ + L+ +C++ +I++ F ML G+
Sbjct: 541 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGI 600
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+P YS +I L ++GR AK F M ++G D T N++L L + F+EA
Sbjct: 601 KPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEA 658
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 139/534 (26%), Positives = 243/534 (45%), Gaps = 43/534 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P YN+V+ AL K+ ++D A +QM + P+ +TYN LI+G G EA
Sbjct: 249 GIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEA 308
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+R+ K+M P+V T ++L+ C ++ E V + M + P+ + +++G
Sbjct: 309 VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNG 368
Query: 125 VFR--CL-DPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRG 180
CL D F+L++ + + N L+ +N M +A I +M D G
Sbjct: 369 YATKGCLVDMTDLFDLMLG----DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T+ + L +++ + I +GV P Y L++ G ++
Sbjct: 425 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAK 484
Query: 241 R----------YLNHVFKDRLVSN-----------------VNS--------YNMVIDCF 265
+L+ VF +++N VN Y+M++D +
Sbjct: 485 ELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGY 544
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C V M++A + M I PN+V + TL++G+CK + + L +L+ G KP
Sbjct: 545 CLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPST 604
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
++ +ID L +A R A EM E G+ + TYNI++R L ++ LF++
Sbjct: 605 ILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKE 664
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
++A + +I T N +I + ++E+A+ F S+ L P +YS +I LIK G
Sbjct: 665 LRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGL 724
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
+EA+ F SM+ GC P+S N ++ L+++ A + ER S +
Sbjct: 725 VEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 778
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 176/404 (43%), Gaps = 6/404 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P +N +I A +D A + F +M KPD TY +I +CRIG +D+A
Sbjct: 389 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 448
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ QM G AP+ Y Y LI GFC + + ++ + + + S+++
Sbjct: 449 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 508
Query: 125 V---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ R +D F+L + + P +V + L+ +A + M G
Sbjct: 509 LCKLGRVMDAQNIFDLTVN-VGLHP--DAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P + V ++E + ++RG+KP Y ++++ L++AGR V
Sbjct: 566 EPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKV 625
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + + + ++ +YN+V+ K D A + +E+R ++ N++T NT+I G
Sbjct: 626 KFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMF 685
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ V + ++L + P T++ MI L + E+A D S M G PN+
Sbjct: 686 QTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSR 745
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
N ++R L ++ R+ K+ S + T L+ F
Sbjct: 746 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLF 789
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 144/321 (44%), Gaps = 38/321 (11%)
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
R + P TY +LM+ +A R + + + L N+ N +++ FC+ D
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 164
Query: 274 ATEI------------------------CREMRDRDI--------------APNLVTFNT 295
A +I C + + +PN+V +NT
Sbjct: 165 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 224
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
+I G K+ +V+K +L +++ G PD T+NS++ LC+A + A L +MV
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 284
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
V PN TYN LI + G ++R+F++M+ I PD+ T + L+ S C+ KI++A
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 344
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
F +M G PD FSY+ ++ G + F M +G PD YT N++++
Sbjct: 345 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY 404
Query: 476 VQQGRFEEAHDIVKTSKERGI 496
G ++A I ++ G+
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGV 425
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 98/239 (41%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ +Y +++ K ID F++M KP Y+I+I G+ + G A
Sbjct: 564 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPA 623
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+M G A ++ TY I++ G + E + + ++ NV N T+ +++ G
Sbjct: 624 KVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 683
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F+ +A +L + + + ++ L + EA + M + G P
Sbjct: 684 MFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 743
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
S ++ V L+ ++ L +R T +LL++ G E R+L
Sbjct: 744 SRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/550 (24%), Positives = 245/550 (44%), Gaps = 60/550 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P +YN +I +L K+ + A + +M V P+ TYN L++G C +G + EA
Sbjct: 199 VKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAF 258
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L+ +M+ P+V T+ LID ++ VL +M + + P+ T SL+ G
Sbjct: 259 SLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGY 318
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKL-VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F L+ K + + M + +T + T++ L M EA ++ +M + +P+
Sbjct: 319 F-FLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPD 377
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L L + ++G++P +Y +L++AL K GR +
Sbjct: 378 IVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQ 437
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMM--------------------------------- 271
+ NV +YN++I+ CK ++
Sbjct: 438 RLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKD 497
Query: 272 --DRATEICREMRDRD-----------------------IAPNLVTFNTLISGHCKDAEV 306
D+A +I REM R I P++VT+ TL+ G+ E+
Sbjct: 498 ENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNEL 557
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ + + + G P+ + MID LC+ ++A+ EM + PN +TY L
Sbjct: 558 KHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSL 617
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I +LC + R++ L ++M+ I PD+Y++ L+ C+ ++E A++ F +L G
Sbjct: 618 IDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGY 677
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+ Y+A+I L K+G FDEA ME GC PD+ T ++I+ L ++ ++A
Sbjct: 678 HLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEK 737
Query: 487 IVKTSKERGI 496
I+ RG+
Sbjct: 738 ILXEMIARGL 747
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/518 (24%), Positives = 227/518 (43%), Gaps = 27/518 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ N +I L I A Q+ + ++ +Y LI+G+C+ G
Sbjct: 128 GYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAV 187
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL++++EG P+V Y +I C K + + + M + + PN T +LV+G
Sbjct: 188 ARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYG 247
Query: 125 VFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
C+ H +AF LL + NTL+ L A +L M
Sbjct: 248 F--CIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIK 305
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ T++ + + + + + GV P TY +++ L K E
Sbjct: 306 PDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSL 365
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ ++ ++ +Y +ID CK + ++RA +C++M+++ I P++ ++ L+ CK
Sbjct: 366 FEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCK 425
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ +E LL G+ + T+N MI+ LC+A F +A+D S+M G P+ IT
Sbjct: 426 GGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAIT 485
Query: 363 YNILI----------------RSLCAIG-DVARSLRLFQK------MQADRISPDIYTFN 399
+ +I R + A G AR +RL + M I PD+ T+
Sbjct: 486 FKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYG 545
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
L+ + +N+++ A+ F+SM +G+ P+ Y+ +I L K DEA F M+
Sbjct: 546 TLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHK 605
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
P+ T +++ L + E A ++K KE GI
Sbjct: 606 NMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQ 643
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 215/474 (45%), Gaps = 10/474 (2%)
Query: 29 AYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILID 88
A F +M + + P F +N ++ + + L K+ E G P++ T IL++
Sbjct: 47 AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
FC+ + F VL + +R PN T+ +L+ G+ + KA + + +
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKAL-----YFHDQVVA 161
Query: 149 QKLVCNTLLYRLSNNSM-----ASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
Q N + YR N + A +LRK+ P+ ++ + L L +
Sbjct: 162 QGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGD 221
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
C + I +G+ P TY L+ G E LN + + +V ++N +ID
Sbjct: 222 ACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLID 281
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
K M A + M I P++VT+N+LI G+ +V + + + + G P
Sbjct: 282 ALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTP 341
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
+ T+ +MID LC+ ++A+ EM + P+ +TY LI LC + R++ L
Sbjct: 342 NVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALC 401
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+KM+ I PD+Y++ L+ + C+ ++E A++ F +L G + +Y+ +I L K+
Sbjct: 402 KKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKA 461
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
F EA ME GC PD+ T I+ L ++ ++A I++ RG+
Sbjct: 462 DLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQ 515
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 130/556 (23%), Positives = 238/556 (42%), Gaps = 64/556 (11%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P T +N ++ +LV + F++ + PD T NIL++ C + + A +
Sbjct: 61 PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ + GY PN T LI G C + + + + + N+ + R+L++G+ +
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ KA L+R +E + +V NT+++ L N + +A + +M +G P
Sbjct: 181 TGET-KAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVV 239
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD---------- 236
T++ V L E +L+ + + P T+ L++AL K G+
Sbjct: 240 TYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVM 299
Query: 237 ---------------VEGDRYLNHVFKDRLV----------SNVNSYNMVIDCFCKVNMM 271
++G +LN V + V NV +Y +ID CK M+
Sbjct: 300 MKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMV 359
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
D A + EM+ +++ P++VT+ +LI G CK+ + + L + E G +PD +++ +
Sbjct: 360 DEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTIL 419
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
+D LC+ R E+A + ++ G N TYN++I LC ++ L KM+
Sbjct: 420 LDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGC 479
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL-----------------------RP 428
PD TF +I + ++ +KAEK M+ GL +P
Sbjct: 480 MPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKP 539
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
D +Y L+ AK F SM Q G P+ ++++ L ++ +EA +
Sbjct: 540 DVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLF 599
Query: 489 KTSKERGISFKSFPGL 504
+ K + + FP +
Sbjct: 600 EEMKHKNM----FPNI 611
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 190/457 (41%), Gaps = 82/457 (17%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ R Y +ID L K +D A F++M PD TY LI G+C+ ++ A
Sbjct: 338 GVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERA 397
Query: 65 LRLVKQMEGLGYAPNVYTYT-----------------------------------ILIDG 89
+ L K+M+ G P+VY+YT ++I+G
Sbjct: 398 IALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMING 457
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C A E + M+ + P+ T ++++ +F E++
Sbjct: 458 LCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALF----------------EKDE--- 498
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+A ILR+M RG L E+ + L E +L
Sbjct: 499 ----------------NDKAEKILREMIARG-LQEARK-----------VRLKEAKIVLA 530
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
K +KP TY LM+ + + + + NV Y ++ID CK
Sbjct: 531 VMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKK 590
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+D A + EM+ +++ PN+VT+ +LI CK+ + + LL + E G +PD +++
Sbjct: 591 TVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYT 650
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++D LC++ R E A + ++ G N Y +I LC G +L L KM+
Sbjct: 651 ILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDK 710
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
PD TF+ +I + ++ +KAEK M+ GL
Sbjct: 711 GCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G++P+ + Y +ID L K ++D A F++M P+ TY LI +C+ ++
Sbjct: 570 MGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLER 629
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+K+M+ G P+VY+YTIL+DG C + R+ + + R LV
Sbjct: 630 AIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQ--------------RLLVK 675
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + L ++ V ++ L + EA + KM D+G +P
Sbjct: 676 G----------YHLNVQ-----------VYTAMINELCKAGLFDEALDLQXKMEDKGCMP 714
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
++ TFD + L + ++ IL I RG+
Sbjct: 715 DAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 219/460 (47%), Gaps = 2/460 (0%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGY--APNVYTYTILIDGFCNAKRVAE 98
C PD F+Y+IL+ +C G +A L++ M G +P+V Y +IDGF V +
Sbjct: 178 CVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNK 237
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
+ + M +R + P+ T S+VH + + KA L + + + L N L+Y
Sbjct: 238 ACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIY 297
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
S+ EA + ++M + LP+ TF+ + L + E + DT +G P
Sbjct: 298 GYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNP 357
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
+Y +++ G V+ + + D + + ++N++I + M+D+A I
Sbjct: 358 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIF 417
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
EMRD + PN++T+ T+I+ C+ ++ E +++ G PDK+ ++ +I C
Sbjct: 418 NEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTH 477
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
A + +SE++ G+ + + ++ +I +LC +G V + +F + P +
Sbjct: 478 GSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVY 537
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+ L+ +C + K+EKA + F +M++ G+ P++ Y L+ K GR DE F M Q
Sbjct: 538 SMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQ 597
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
G P + N+I++ L + GR A E GI+
Sbjct: 598 KGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAM 637
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 216/478 (45%), Gaps = 35/478 (7%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP YN VID K ++ A F++M PD TY+ ++H +C+ +D+A
Sbjct: 216 SPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEA 275
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++QM G PN +TY LI G+ + + E RV + M+ +++ P+ T
Sbjct: 276 FLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTF-------- 327
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
N L+ L EA + M +G P+
Sbjct: 328 ---------------------------NMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 360
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+++ + T L + + D + G+ P T+ +L++A G + N +
Sbjct: 361 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM 420
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ NV +Y VI C++ MD A E +M D+ +AP+ ++ LI G C +
Sbjct: 421 RDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL 480
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
K +EL+ ++ G D F+S+I+ LC+ R DA + V G+ P + Y++L
Sbjct: 481 LKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSML 540
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ C +G + ++LR+F M + I P+ + L+ +C++ +I++ F ML G+
Sbjct: 541 MDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 600
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+P Y+ +I L ++GR AK F M ++G + T +++L L + F+EA
Sbjct: 601 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEA 658
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 143/535 (26%), Positives = 238/535 (44%), Gaps = 45/535 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P Y++V+ AL K+ ++D A +QM P+ +TYN LI+G G EA
Sbjct: 249 GIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEA 308
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+R+ K+M P+V T+ +L+ C ++ E V + M + P+ + +++G
Sbjct: 309 VRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNG 368
Query: 125 VFR--CL-DPHKAFELLIRFMEREPLTQKLVC--NTLLYRLSNNSMASEAAAILRKMGDR 179
CL D F+L++ ++C N L+ +N M +A I +M D
Sbjct: 369 YATKGCLVDMTDLFDLML-----GDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDH 423
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP----------RFSTYLLLMEA 229
G P T+ + L +++ + I +GV P F T+ L++A
Sbjct: 424 GVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKA 483
Query: 230 -------------------------LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
L K GR ++ + L Y+M++D
Sbjct: 484 KELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDG 543
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
+C V M++A + M I PN V + TL++G+CK + + L +L+ G KP
Sbjct: 544 YCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 603
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
+N +ID L A R A EM E G+ N TY+I++R L ++ LF+
Sbjct: 604 TILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFK 663
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+++A + DI T N +I + ++E+A+ F S+ GL P +YS +I LIK G
Sbjct: 664 ELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEG 723
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
+EA+ F SM+ GC PDS N ++ L+++ A + ER S +
Sbjct: 724 LVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 778
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 148/321 (46%), Gaps = 38/321 (11%)
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYL---------------NHVFK---------- 248
R + P TY +LM+ +A R + NH+ K
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 164
Query: 249 --DRL---------VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI--APNLVTFNT 295
D L V +V SY++++ C +A ++ R M + +P++V +NT
Sbjct: 165 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNT 224
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
+I G K+ +V+K +L +++ G PD T++S++ LC+A + A L +MV G
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
V PN TYN LI + G ++R+F++M+ I PD+ TFN L+ S C+ KI++A
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEAR 344
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
F +M G PD FSY+ ++ G + F M +G P T N++++
Sbjct: 345 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAY 404
Query: 476 VQQGRFEEAHDIVKTSKERGI 496
G ++A I ++ G+
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGV 425
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 177/404 (43%), Gaps = 6/404 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P +N +I A +D A + F +M KP+ TY +I +CRIG +D+A
Sbjct: 389 GIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDA 448
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ QM G AP+ Y Y LI GFC + + ++ + + + S+++
Sbjct: 449 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINN 508
Query: 125 V---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ R +D F+L + + P +V + L+ +A + M G
Sbjct: 509 LCKLGRVMDAQNIFDLTVN-VGLHP--TAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P + V ++E + +++G+KP Y ++++ L++AGR V
Sbjct: 566 EPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 625
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + + + N +Y++V+ K D A + +E+R ++ +++T NT+I+G
Sbjct: 626 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 685
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ V + ++L + G P T++ MI L + E+A D S M G P++
Sbjct: 686 QTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSR 745
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
N ++R L ++ R+ K+ S + T L+ F
Sbjct: 746 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLF 789
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 102/248 (41%), Gaps = 10/248 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ +Y+ ++D ++ A F M +P+ Y L++G C+IG +DE
Sbjct: 528 VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDE 587
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L L ++M G P+ Y I+IDG A R M E + N+ T ++
Sbjct: 588 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLR 647
Query: 124 GVF--RCLDPHKAFELLIRFMEREPLTQK---LVCNTLLYRLSNNSMASEAAAILRKMGD 178
G+F RC D E + F E + K + NT++ + EA + +
Sbjct: 648 GLFKNRCFD-----EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISR 702
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G +P T+ +T L+ + E + + G +P ++ L K V
Sbjct: 703 SGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVR 762
Query: 239 GDRYLNHV 246
YL+ +
Sbjct: 763 AGAYLSKI 770
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSL--------CAIGD---VARSLRLFQKMQA 388
R E+A D L E+ G P N + ++ C G VA R + Q
Sbjct: 44 RPEEAHDLLDELQRRGTPVLERDLNGFLAAIARAPSSAACRSGPALAVALFNRAASRAQG 103
Query: 389 DRI-SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
R+ SP +T+ L+ R ++ E A F +L GLR D + L+K ++ R D
Sbjct: 104 PRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTD 163
Query: 448 EAKQTFLS-MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
EA L + GC PD ++ +++L++L QG+ +A D+++ E G
Sbjct: 164 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGG 212
>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 605
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 214/488 (43%), Gaps = 39/488 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN ++D L K ++ A M + P+R T+NIL+ G C++G + EA +
Sbjct: 81 PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEV 140
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ M P+V TYT LI G C ++ E FR+ + M+ + P+ T L++G F
Sbjct: 141 IDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFE 200
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
C K FEL+ + + N ++ A LRKM + G+ P+ T
Sbjct: 201 CSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVT 260
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
F+ L KAGR E R ++ +
Sbjct: 261 FN-----------------------------------TLSNGYCKAGRLSEAFRMMDEMS 285
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ L N + N ++ C +D A ++ R + V++ TLI G+ K +
Sbjct: 286 RKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSX 345
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
E+ E P T+ +MI LCR+ + + ++D +E++E G+ P+ TYN +I
Sbjct: 346 XWDEMK----EKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTII 401
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
C G V ++ KM PD++T N L++ C ++KA K F + ++ G
Sbjct: 402 LGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKA 461
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
D +++ +I L + GRF+EA ME+ PD YT N IL L GR +EA +
Sbjct: 462 IDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEF 521
Query: 488 VKTSKERG 495
+ E+G
Sbjct: 522 MSGIVEQG 529
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 141/288 (48%), Gaps = 3/288 (1%)
Query: 216 VKPRFSTYLLLMEAL--YKAGRDVEGDRYL-NHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+KP T L++AL Y + V + + + V K + N N++N++I C N +
Sbjct: 6 LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLS 65
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + +M+ P+ V++NT++ CK ++++ R+LL+ + G P++ TFN ++
Sbjct: 66 EAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILV 125
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
C+ ++A + + M V P+ TY LI LC G + + RL +M+ ++
Sbjct: 126 SGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLL 185
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
P + T+N LI + K + M G++P+ +Y+ ++K +K G+ D A
Sbjct: 186 PHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNE 245
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
ME++G +PD T N + + GR EA ++ +G+ S
Sbjct: 246 LRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNS 293
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/390 (19%), Positives = 165/390 (42%), Gaps = 29/390 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN V+ VK +D A + ++M PD T+N L +G C+ G + EA
Sbjct: 218 GVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEA 277
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++ +M G N T ++ C +++ + +++L +R +E + +L+ G
Sbjct: 278 FRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMG 337
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ E+ E+E + + T++ L + ++ ++ + G +P+
Sbjct: 338 YFKVGKSXXWDEM----KEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPD 393
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-DVEGDRYL 243
+T++ + +++ + +K+ KP T +L+ L G D +
Sbjct: 394 QTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFK 453
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ K + + V ++N +I C+ + A ++ EM ++ + P+ T N ++S
Sbjct: 454 TWISKGKAIDAV-TFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADA 512
Query: 304 AEVHKTRELLVMLLECG-----------------------FKPDKFTFNSMIDCLCRAHR 340
+ + E + ++E G P+ F+ I+ LC +
Sbjct: 513 GRMKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGK 572
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSL 370
++DA+ + E + G+ + TY L+ L
Sbjct: 573 YKDAMHMIQESTQKGIILHKSTYISLMEGL 602
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 114/255 (44%), Gaps = 38/255 (14%)
Query: 281 MRDRDIAPNLVTFNTLISG---HCKDAEVHKTRELLVMLLECGFK--------------- 322
M+ + PNL+T NTLI + V+ ++ + +++ G +
Sbjct: 1 MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCI 60
Query: 323 --------------------PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
PD ++N+++D LC+ + +A D L +M G+ PN T
Sbjct: 61 ENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNT 120
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+NIL+ C +G + + + M + + PD+ T+ LI C+ KI++A + M
Sbjct: 121 FNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEME 180
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
L L P +Y+ LI + + + ME G P++ T N++++ V++G+ +
Sbjct: 181 NLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMD 240
Query: 483 EAHDIVKTSKERGIS 497
A + ++ +E G S
Sbjct: 241 NAGNELRKMEESGFS 255
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 12/228 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN +I + +D A+ +M KPD FT NIL+ G+C G++D+A
Sbjct: 389 GLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKA 448
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L K G A + T+ +I G C R E F +L M+E+ + P+ T +++
Sbjct: 449 LKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSA 508
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A E + +E+ L + + S N +E+++ + D P
Sbjct: 509 LADAGRMKEAEEFMSGIVEQGKLQDQTI--------SLNKRKTESSSETSQESD----PN 556
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK 232
S F + L T + ++ ++G+ STY+ LME L K
Sbjct: 557 SVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGLIK 604
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 231/499 (46%), Gaps = 1/499 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG S Y+ ++ L K N +A+L +++M + Y +++ +C+ G V
Sbjct: 130 LGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQA 189
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM-KERNVCPNEATVRSLV 122
A ++ LG+ + + T L+ C + E FRV E M KE N PN T L+
Sbjct: 190 AEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILI 249
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
HG+ +AF+L +E+ L+ + M +A +L +M + +
Sbjct: 250 HGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACV 309
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T+ + L + E G+ +K G+ P T+ L+ K G V +
Sbjct: 310 PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 369
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L+ + K N+ +YN +++ C+V+ +A + R + D + P+ VT+N L+ G CK
Sbjct: 370 LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCK 429
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ +++ + + G +PD FTF ++ID LC+ R E A L MV+ G+ + +T
Sbjct: 430 EGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVT 489
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+ LI C IG LF+ M +R +TFN + + + K+ +A M+
Sbjct: 490 FTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMM 549
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
GL P +++ LI+ ++G + + M+Q GC+P+ YT +I+ L GR E
Sbjct: 550 KYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVE 609
Query: 483 EAHDIVKTSKERGISFKSF 501
EA I+ + G+S F
Sbjct: 610 EAETILFSMSSFGVSPNHF 628
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 223/504 (44%), Gaps = 38/504 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PSTR Y +I A D A +M+ C P+ TY ILI +CR G ++EA
Sbjct: 272 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 331
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++M G P + T+ LI+G+C V F++L +M++ N PN T L+ G
Sbjct: 332 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 391
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R +KAF LL R ++ L ++ N L+ + A I M G P+
Sbjct: 392 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 451
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + L L + GIL + +K+G+ T+ L++ K G+ +
Sbjct: 452 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE 511
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
++ ++R ++ +++N +D K ++ A + +M + P++VT LI GHC+
Sbjct: 512 NMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAG 571
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E + ++L + + G P+ +T+ +I+ LC R E+A L M +GV PN TY
Sbjct: 572 ETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYA 631
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+L+++ G + R+ ++ M + P+ + ++AL+ F N A +A S L
Sbjct: 632 VLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGA-RALSSTGDL 690
Query: 425 GLR-------------------------------------PDNFSYSALIKALIKSGRFD 447
R P Y+ L+ L K GR
Sbjct: 691 DARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRII 750
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLI 471
EA Q M ++G PD S++I
Sbjct: 751 EADQLTQDMVKHGLFPDKAISSII 774
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/485 (22%), Positives = 206/485 (42%), Gaps = 41/485 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P +NA+I+ K + A+ M CKP+ TYN L+ G+CR+ +A
Sbjct: 342 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 401
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++++ G P+ TY IL+DGFC ++ F + M + P+ T +L+ G
Sbjct: 402 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 461
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A +L +++ ++ L+ A + + M + L
Sbjct: 462 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTT 521
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ TF+ + L LNE +L +K G+ P T+ +L+E +AG + L
Sbjct: 522 AHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLE 581
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + NV +Y ++I+ C ++ A I M ++PN T+ L+ H K
Sbjct: 582 RMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAG 641
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMI-------------------------------- 332
+ + +++ +++ G +P+ +++++
Sbjct: 642 RLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEEND 701
Query: 333 -DCLCRAHRF-----EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
+CL +H F + AL E+ + GVP + YN L+ LC G + + +L Q M
Sbjct: 702 NNCL-SSHVFRLMDVDHALKIRDEIKKCGVPTEDL-YNFLVVGLCKEGRIIEADQLTQDM 759
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ PD +++I+ +C+ K + + +L P SY +I L GR
Sbjct: 760 VKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRV 818
Query: 447 DEAKQ 451
EA++
Sbjct: 819 QEAQK 823
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 160/420 (38%), Gaps = 74/420 (17%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN ++D K +++A+ F M+ +PD FT+ LI G+C++G +++A
Sbjct: 412 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 471
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER--------------- 109
++ M G + + T+T LIDG C + +V + E M E
Sbjct: 472 NGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDA 531
Query: 110 --------------------NVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
+ P+ T L+ G R + + ++L R +
Sbjct: 532 LGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 591
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
++ L NN EA IL M G P T+ V V L+ I+
Sbjct: 592 VYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVS 651
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN----------------------HVF 247
T +K G +P Y L+ + + G R L+ HVF
Sbjct: 652 TMVKNGCQPNSHIYSALLSGFVLSNTAI-GARALSSTGDLDARSLSSEENDNNCLSSHVF 710
Query: 248 K-----------DRL----VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
+ D + V + YN ++ CK + A ++ ++M + P+
Sbjct: 711 RLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KA 769
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+++I +CK + E + ++L+ F P ++ +I L R ++A +S++V
Sbjct: 770 ISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 829
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 42/247 (17%)
Query: 296 LISGHCKDAE--VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
L+ C+D+E V K L + E GF+ +++++ CL + + A MV
Sbjct: 105 LLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVN 164
Query: 354 WGVPPNTITYNILIRSLCAIG-----------------------------------DVAR 378
G I Y ++ +LC G D+
Sbjct: 165 EGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGE 224
Query: 379 SLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+ R+F+KM + + P+ T++ LI C ++E+A + M+ G +P +Y+ LI
Sbjct: 225 AFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 284
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
KA G D+A + M C P+ +T ++++ L ++G+ EEA+ + + + G+
Sbjct: 285 KAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLC 344
Query: 498 FKSFPGL 504
PG+
Sbjct: 345 ----PGI 347
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 228/462 (49%), Gaps = 12/462 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + + ALV+ +QM + D + ILI+ CR+ VD +
Sbjct: 89 PSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSV 148
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ LG PNV T++ LI+GFC ++ + ++M R PN + ++ G+ R
Sbjct: 149 LGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCR 208
Query: 128 CLDPHKAFELL--IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ +LL ++ + EP ++ NT++ RL + + +EA I KM G LP
Sbjct: 209 VGKTTEVIKLLEHMKVVGCEP--DVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTV 266
Query: 186 STFDYTVTCLVTGLD----LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
T+ T L+ GL E G+L+ + P + +L++ + K G E
Sbjct: 267 VTY----TSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARV 322
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + + + +V +YN +++ +C + A ++ M + P++ +F+ L++G+C
Sbjct: 323 ILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYC 382
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + + ++L + G PD ++N++I LC+A R +A + +M G PPN +
Sbjct: 383 KAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLV 442
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY+IL+ L G + +++ LF+ M+ + PD+ T+N +I C+ K + A + F +
Sbjct: 443 TYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAEL 502
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
GL+P+N+ + I + K G DEA + F ME++ C+P
Sbjct: 503 SVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 186/418 (44%), Gaps = 35/418 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ ++ +I+ I A F M KP+ +Y+I+I G+CR+G E
Sbjct: 155 LGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTE 214
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
++L++ M+ +G P+V Y ++D C + V E + MK + P T SL+H
Sbjct: 215 VIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIH 274
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G L N EA +L +M +P
Sbjct: 275 G-----------------------------------LRNLGRWKEAFGLLNEMKGGNIMP 299
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ F + + +++E IL T + GV+P +TY LM VE +
Sbjct: 300 DLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVF 359
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +V S++++++ +CK +D A ++ EM R + P+ V++NTLISG C+
Sbjct: 360 EVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQA 419
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ EL + G+ P+ T++ ++DCL + + A+ M G+ P+ +TY
Sbjct: 420 RRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTY 479
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
NI+I +C G + LF ++ + P+ + I C+ +++A KAF M
Sbjct: 480 NIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQM 537
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 165/361 (45%), Gaps = 35/361 (9%)
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
++L K+ G P TF + + + D + RG KP +Y ++++ L
Sbjct: 147 SVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGL 206
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI-CR---------- 279
+ G+ E + L H+ +V YN ++D CK +++ A I C+
Sbjct: 207 CRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTV 266
Query: 280 ------------------------EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
EM+ +I P+LV F+ LI CK+ EV + R +L
Sbjct: 267 VTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKT 326
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
+ E G +PD T+N++++ C +A M+ G P+ +++IL+ C
Sbjct: 327 MTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKR 386
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+ + +LF +M + PD ++N LI C+ + +AE+ F M + G P+ +YS
Sbjct: 387 IDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSI 446
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
L+ L K G D+A F +ME +G PD T N++++ + + G+F++A ++ +G
Sbjct: 447 LLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKG 506
Query: 496 I 496
+
Sbjct: 507 L 507
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 136/292 (46%), Gaps = 35/292 (11%)
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
G L + K L NV +++ +I+ FC + RA E+ M R PN+ +++ +I
Sbjct: 145 GFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIK 204
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH------------------- 339
G C+ + + +LL + G +PD +N+++D LC+
Sbjct: 205 GLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILP 264
Query: 340 ----------------RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
R+++A L+EM + P+ + +++LI +C G+V+ + +
Sbjct: 265 TVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVIL 324
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+ M + PD+ T+N L+ +C ++ +A K F M++ G PD FS+S L+ K+
Sbjct: 325 KTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKA 384
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
R DEAKQ F M G PD+ + N ++ L Q R EA ++ K G
Sbjct: 385 KRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNG 436
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 121/242 (50%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+V S ++I+CFC++ +D + ++ + PN++TF+TLI+G C + ++ + EL
Sbjct: 125 DVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELF 184
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+++ G+KP+ +++ +I LCR + + + L M G P+ + YN ++ LC
Sbjct: 185 DVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKD 244
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
V ++ +F KM+ I P + T+ +LI + + ++A M + PD ++
Sbjct: 245 RLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAF 304
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
S LI + K G EA+ +M + G PD T N ++ + EA + +
Sbjct: 305 SVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMIS 364
Query: 494 RG 495
+G
Sbjct: 365 KG 366
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 8/288 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ Y ++I L A+ +M PD +++LI +C+ G V EA
Sbjct: 261 GILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEA 320
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++K M +G P+V TY L++G+C V E +V E+M + P+ + LV+G
Sbjct: 321 RVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNG 380
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +L R + + NTL+ L EA + + M GY P
Sbjct: 381 YCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPN 440
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + CL L++ G+ G+KP TY ++++ + K G+ +
Sbjct: 441 LVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDA----R 496
Query: 245 HVFKDRLVSNVNSYNMV----IDCFCKVNMMDRATEICREMRDRDIAP 288
+F + V + N V ID CK ++D A + R+M D +P
Sbjct: 497 ELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y+ ++D L K +D A F+ M KPD TYNI+I G+C+ G +A
Sbjct: 436 GYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDA 495
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
L ++ G PN + T IDG C + E + M++ + P + +
Sbjct: 496 RELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCI 549
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 144/540 (26%), Positives = 246/540 (45%), Gaps = 54/540 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P Y +V+D L + +D A ++M + +PD+FT++ LI G C VDEA
Sbjct: 76 GMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEA 135
Query: 65 LRLVKQM--------------------------------------EGLGYAPNVYTYTIL 86
L+L K++ E + P+V TYT L
Sbjct: 136 LKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTAL 195
Query: 87 IDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREP 146
IDGFC + + + ++L +M+ R PN T SL+HG+ + D +A +L R +
Sbjct: 196 IDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGC 255
Query: 147 LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
+ + TL++ L A ++ +M ++ +++ + + E
Sbjct: 256 VPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQ 315
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL--NHVFKDRLVSNVNSYNMVIDC 264
+ + P TY L+ A R +E R+L N + +V +Y++V+
Sbjct: 316 LFKEMAAKSCLPDRITYTCLVRGFCNASR-LEEARFLLENMKTAAGIDPDVVTYSIVVAG 374
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
+ + A E +EM R++APN VT+++LI G CK V+ E+L + KPD
Sbjct: 375 YSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNV----DKPD 430
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
T+ +I+ LC R E+AL L EMV V P+ T+N +I +LC +GD+ + +L
Sbjct: 431 VVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLV 490
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKA--------EKAFFSMLTLGLRPDNFSYSAL 436
M A + P + T+ L++ F R ++E A KA S L P+ ++SAL
Sbjct: 491 AMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQ-AFSAL 549
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
I+ L K+ D+A + C P I++ L++ GR EEA ++ + + G+
Sbjct: 550 IRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 125/504 (24%), Positives = 239/504 (47%), Gaps = 9/504 (1%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKPDRFTYNILIHGICRIGVVDEA 64
++P Y+ VI+ K +D A ++M + D PD TY ++ G+CR G +D A
Sbjct: 41 VAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRA 100
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+V++M+ G P+ +T++ LI G+CNA++V E ++ + + + + + +L+ G
Sbjct: 101 CEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITG 160
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQK---LVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ R +A+EL RE K + L+ + +A +L M R
Sbjct: 161 LCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKC 220
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P T+ + L DL++ + +G P TY L+ L A +
Sbjct: 221 VPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARL 280
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
++ + ++ SYN ++D +C++ ++ A ++ +EM + P+ +T+ L+ G C
Sbjct: 281 LMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFC 340
Query: 302 KDAEVHKTRELLV-MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ + + R LL M G PD T++ ++ RA RF +A + + EM+ V PN
Sbjct: 341 NASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNA 400
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TY+ LI LC G V ++ + + + PD+ T+ +I+ C ++ E+A
Sbjct: 401 VTYSSLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEE 456
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ + P +++++I AL + G DEA + ++M +G P T +LE + GR
Sbjct: 457 MVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR 516
Query: 481 FEEAHDIVKTSKERGISFKSFPGL 504
E A+++ + + + S L
Sbjct: 517 MEIAYELFEVMRRKAKKSSSAANL 540
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 219/456 (48%), Gaps = 26/456 (5%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQM-EGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
P+ TYN++++G+C+ + +A ++K+M +G AP++ TY+ +I+GFC + E+ R
Sbjct: 7 PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFC---KQGEMDR 63
Query: 102 VLEIMKER----NVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL 157
EI++E + P+ T S+V G+ R +A E++ + K + L+
Sbjct: 64 ACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALI 123
Query: 158 YRLSNNSMASEAAAILRKMGDRGYLPESSTFD-YTVTCLVTGL----DLNETCGILDTFI 212
N EA + +++ L S D + + L+TGL + E +
Sbjct: 124 TGWCNARKVDEALKLYKEI-----LTSSCRLDAVSSSALITGLCRERRIGEAYELFQEME 178
Query: 213 KR---GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
R KP TY L++ K+G + + L + + V NV +Y+ ++ CK
Sbjct: 179 MREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAG 238
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+D+A ++ R M + PN+VT+ TLI G C +V R L+ + D ++N
Sbjct: 239 DLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYN 298
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ-A 388
+++D CR R E+A EM P+ ITY L+R C + + L + M+ A
Sbjct: 299 ALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTA 358
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
I PD+ T++ ++ + R + +A + M+ + P+ +YS+LI L K+GR +
Sbjct: 359 AGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNH 418
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
A + ++++ PD T +++E L R EEA
Sbjct: 419 AMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEA 450
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 137/254 (53%), Gaps = 5/254 (1%)
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD-RDIAPNLVTFNTLISGHCKDAE 305
++ + N +YN+V++ CK + +A E+ +EMRD + +AP+LVT++T+I+G CK E
Sbjct: 1 MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60
Query: 306 VHKTRELL-VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + E+L M+ G PD T+ S++D LCR + + A + + EM GV P+ T++
Sbjct: 61 MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C V +L+L++++ D + +ALI CR +I +A + F M
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180
Query: 425 ---GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+PD +Y+ALI KSG ++A + ME C P+ T + +L L + G
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 240
Query: 482 EEAHDIVKTSKERG 495
++A D+ + +G
Sbjct: 241 DQALDLFRRMTSKG 254
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 141/321 (43%), Gaps = 45/321 (14%)
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLN----HVFKDRLVSNVNSYNMVIDCFCKVN 269
+ V P TY ++ K G E DR V +D + +V +Y V+D C+
Sbjct: 39 KSVAPDLVTYSTVINGFCKQG---EMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDG 95
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT----RELLV----------- 314
MDRA E+ REM+ + + P+ TF+ LI+G C +V + +E+L
Sbjct: 96 KMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSS 155
Query: 315 -----------------------MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
M + +KPD T+ ++ID C++ E A+ L M
Sbjct: 156 ALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVM 215
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
PN +TY+ L+ LC GD+ ++L LF++M + P++ T+ LI C +K+
Sbjct: 216 EGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKV 275
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
+ A M D SY+AL+ + GR +EAKQ F M C PD T +
Sbjct: 276 DAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCL 335
Query: 472 LETLVQQGRFEEAHDIVKTSK 492
+ R EEA +++ K
Sbjct: 336 VRGFCNASRLEEARFLLENMK 356
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSML-TLGLRPDNFSYSALIKALIKSGRFDEA 449
++P+ T+N ++ C+ KA + M + PD +YS +I K G D A
Sbjct: 5 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64
Query: 450 KQTFLSM-EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ M ++G PD T +++ L + G+ + A ++V+ K +G+ F
Sbjct: 65 CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKF 117
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 231/493 (46%), Gaps = 24/493 (4%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
TRLY A +L+ + + + A+ V QC ++ IG V EA+ +V
Sbjct: 112 TRLYIACAASLISNKNFEKAH------EVMQC---------MVKSFAEIGRVKEAIEMVI 156
Query: 70 QMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
+M G AP+ T ++ V + + M R V PN + R +V G +
Sbjct: 157 EMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLG 216
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
+ ++ L +ER + + ++ + A R+ + G P F
Sbjct: 217 NVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINF- 275
Query: 190 YTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR-YLN 244
TC++ GL + + +L+ + RG KP T+ L++ L K G + R +L
Sbjct: 276 ---TCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLK 332
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
V + NV +Y +I +C+ M+RA + M+++ +APN T+ TLI GHCK
Sbjct: 333 LVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAG 392
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ EL+ ++ E GF P+ T+N+++D LC+ R ++A L G+ + +TY
Sbjct: 393 NFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYT 452
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
ILI C ++ ++L LF KM I PDI+++ LI FCR +++++E F +
Sbjct: 453 ILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRF 512
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL P N +Y+++I + G A + F M +GC DS T ++ L +Q + +EA
Sbjct: 513 GLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEA 572
Query: 485 HDIVKTSKERGIS 497
+ E+G++
Sbjct: 573 RCLYDAMIEKGLT 585
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 193/425 (45%), Gaps = 1/425 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++PST+ N V+ + + ++ A F +M +P+ +Y +++ G C++G V E+
Sbjct: 162 GLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLES 221
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R + M G+ + T ++++ FC V E + PN ++ G
Sbjct: 222 DRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEG 281
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDRGYLP 183
+ + +AFE+L + R L+ L +A + K+ + P
Sbjct: 282 LCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKP 341
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ ++ +N +L ++G+ P +TY L++ KAG +
Sbjct: 342 NVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELM 401
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + ++ NV +YN ++D CK + A ++ + + + VT+ LIS HCK
Sbjct: 402 NVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQ 461
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
AE+ + L +++ G +PD ++ ++I CR R +++ E V +G+ P TY
Sbjct: 462 AEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTY 521
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+I C G++ +L+ F +M + D T+ ALI C+ +K+++A + +M+
Sbjct: 522 TSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIE 581
Query: 424 LGLRP 428
GL P
Sbjct: 582 KGLTP 586
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 181/407 (44%), Gaps = 4/407 (0%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
+P+ + +I G+C+ G V +A ++++M G G+ PNVYT+T LIDG C + FR
Sbjct: 269 RPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFR 328
Query: 102 V-LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
+ L++++ N PN T +++ G R ++A LL R E+ TL+
Sbjct: 329 LFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGH 388
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
A ++ M + G+ P T++ V L + E +L + + G+
Sbjct: 389 CKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADK 448
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY +L+ K + N + K + +++SY +I FC+ M + E
Sbjct: 449 VTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEE 508
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
+ P T+ ++I G+C++ + + + + G D T+ ++I LC+ +
Sbjct: 509 AVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSK 568
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
++A M+E G+ P +T L C I D ++ + ++++ + T N
Sbjct: 569 LDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERLEKKLW---VRTVNT 625
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
L++ C K+ A F +L + + +A + A +S ++D
Sbjct: 626 LVRKLCSERKVGMAALFFHKLLDKDPNVNRVTIAAFMTACYESNKYD 672
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 125/301 (41%), Gaps = 15/301 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+T Y +ID K+ + + AY M+ + P+ TYN ++ G+C+ G V EA
Sbjct: 373 GLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEA 432
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++K G + TYTILI C + + + M + + P+ + +L+
Sbjct: 433 YKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLI-A 491
Query: 125 VF----RCLDPHKAFELLIRF--MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
VF R + FE +RF + ++C R N +A + +M D
Sbjct: 492 VFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYC--REGNLRLALK---FFHRMSD 546
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G +S T+ ++ L L+E + D I++G+ P T + L K
Sbjct: 547 HGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCS 606
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
L + K V VN+ ++ C + A ++ D+D N VT ++
Sbjct: 607 AMVVLERLEKKLWVRTVNT---LVRKLCSERKVGMAALFFHKLLDKDPNVNRVTIAAFMT 663
Query: 299 G 299
Sbjct: 664 A 664
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 216/460 (46%), Gaps = 35/460 (7%)
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
ME G +PN T ILI+ FC +RV F VL + + P T +L++G+ +
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A EL + R T++ L + AA + +KM + G T+
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L +NE I + + P TY L++ L R E LN +
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
++ NV ++N+++D FCK + A + + M + + P++VT+N+L+ G+ EV + R
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+L +++ G KPD F+++ +I+ C+A R ++A +EM+ G PN ++YN LI L
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300
Query: 371 CAIGD-----------------------------------VARSLRLFQKMQADRISPDI 395
C +G + ++ RLF+ MQ+ + P++
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 360
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
+N L+ + C+ ++ A + F + +GL+P+ Y+ +I L K G DEA + F +
Sbjct: 361 VMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRN 420
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
ME +GC PD ++ N+I+ +Q A ++ ++RG
Sbjct: 421 MEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRG 460
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 205/465 (44%), Gaps = 35/465 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ + +I+ L K A F M C+PD +TY +I+G+C+IG
Sbjct: 39 LGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETAL 98
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L K+ME G NV TY+ LI C +RV E + MK +++ P T SL+
Sbjct: 99 AAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQ 158
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G L N S EA+A+L +M +P
Sbjct: 159 G-----------------------------------LCNFSRWKEASALLNEMTSLNIMP 183
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
TF+ V + G+L T + GV+P TY LM VE +
Sbjct: 184 NVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLF 243
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +V SY+++I+ +CK +D A ++ EM + PN V++NTLI G C+
Sbjct: 244 DVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQL 303
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + ++L + G P+ +T+ ++D C+ A M + PN + Y
Sbjct: 304 GRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMY 363
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NIL+ ++C G++ + LF ++ + P++ + +I C+ +++A +AF +M
Sbjct: 364 NILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMED 423
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
G PD FSY+ +I+ ++ A M G D+ T+
Sbjct: 424 DGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGTT 468
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%)
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M ++PN T N LI+ C+ V +L ++ G +P TF ++I+ L + +
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
F A++ +MV G P+ TY +I LC IG+ A + LF+KM+ ++ T++
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI S C+ ++ +A F M + P F+Y++LI+ L R+ EA M
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
P+ T N++++T ++G+ A ++KT E G+
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGV 216
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%)
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G+ PNT T NILI C + V + K + P I TF LI ++ K +A
Sbjct: 5 GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
+ F M+ G +PD+++Y+ +I L K G A F ME+ GC + T + ++ +
Sbjct: 65 VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124
Query: 475 LVQQGRFEEAHDIVKTSKERGIS 497
L + R EA DI K + IS
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDIS 147
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/487 (27%), Positives = 232/487 (47%), Gaps = 6/487 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ ++++++DA V+ + A + +M + P+ TY+ILI+G+CR G V EA
Sbjct: 340 GVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEA 399
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ Q+ G P+V TY+ LIDGFC ++ + + F + IM + P+ L++G
Sbjct: 400 CGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLING 459
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R +A + ++R + N L+ + + MG +P+
Sbjct: 460 LSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPD 519
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ V L L+E + +K+G P Y L++ K G +
Sbjct: 520 VVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFK 579
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + ++ YN++I+ F + ++ E+ RE+ + P++VT+NT+I G+C
Sbjct: 580 LMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLK 639
Query: 305 EVHKTRELLVMLLECG-FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
K +L +L+CG +P+ TF +ID C+ R +DA+ S M+E G PN +TY
Sbjct: 640 IFSKAIKLF-EVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTY 698
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+ LI + + L++KM DR+SP+I +++ LI C+ +E+A AF +
Sbjct: 699 SCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIG 758
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
L PD +Y LI+ K GR EA + M NG PD +L+ + L + G +
Sbjct: 759 RHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD----DLLQKALAEYGFQDS 814
Query: 484 AHDIVKT 490
I T
Sbjct: 815 QASIYST 821
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 221/484 (45%), Gaps = 43/484 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +Y+ +I+ L ++ ++ F K D ++ ++ R+G + +A
Sbjct: 305 GIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKA 364
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + +M G +PNV TY+ILI+G C RV E V + ++ + P+ T SL+ G
Sbjct: 365 IEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDG 424
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + F L + + + +VC+ L+ LS M EA + RG
Sbjct: 425 FCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGL--- 481
Query: 185 SSTFDYTVTCLVTG-LDLNETCGILDTFIKRG---VKPRFSTYLLLMEALYKAGRDVEGD 240
+ +Y L+ G L T L +I G V P TY +L++ L + GR
Sbjct: 482 -TLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGR----- 535
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+D A + ++ + +P+ + + TLI G
Sbjct: 536 ------------------------------LDEALALFFQLLKKGFSPDHIIYCTLIDGF 565
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK + ++ ++ G PD +N +I+ R E+ L+ L E++++G+ P+
Sbjct: 566 CKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDI 625
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TYN +I C++ +++++LF+ ++ R P+ TF LI ++C+ +++ A F S
Sbjct: 626 VTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSS 685
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
ML G P+ +YS LI K+ + A + + M + +P+ + +++++ L ++G
Sbjct: 686 MLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGL 745
Query: 481 FEEA 484
EEA
Sbjct: 746 MEEA 749
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/489 (22%), Positives = 215/489 (43%), Gaps = 9/489 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+TR+++ ++ + + F+ + Y+ L+H CR G+VD A+
Sbjct: 107 PATRVFDRMVGQFGNLEVLGEFHGSFRNYGSNPST----VYSFLLHCYCRNGMVDRAVDT 162
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
M +G + + Y + ++D ++ R+ + E M C + + +
Sbjct: 163 FAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEM-----CKGLGVYEFVFNSFLK 217
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ K +ER + + + CN +L L + A+ M G P T
Sbjct: 218 RGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVT 277
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
F + L L+E + + I++G+ P Y +L+ L++AG+ EG+ +
Sbjct: 278 FSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMAL 337
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ +V ++ ++D + +V + +A E+ M I+PN+VT++ LI+G C++ V
Sbjct: 338 ARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVL 397
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ + +L+ G +P T++S+ID C++ D M+ G P+ + ++LI
Sbjct: 398 EACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLI 457
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
L G + +LR F + ++ + Y FNALI R+ + K + M +
Sbjct: 458 NGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVI 517
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD +Y+ L+K L + GR DEA F + + G +PD +++ ++ I
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQI 577
Query: 488 VKTSKERGI 496
K + GI
Sbjct: 578 FKLMQSNGI 586
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 209/484 (43%), Gaps = 2/484 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P N ++ L N I +A F M P+ T++ LI+ C+ +DEA
Sbjct: 235 GLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEA 294
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L M G P++ Y+ILI+G A ++ E + + R V + S++
Sbjct: 295 FSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDA 354
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLP 183
R D KA E+ R M +E ++ +V ++L L N EA + ++ +G P
Sbjct: 355 YVRVGDLGKAIEVYTR-MLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEP 413
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ + +L + G+ +++G P +L+ L + G E R+
Sbjct: 414 SVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFF 473
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
K L N +N +ID ++ ++ M + P++VT+ L+ G +
Sbjct: 474 FQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQ 533
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + L LL+ GF PD + ++ID C+ L M G+ P+ Y
Sbjct: 534 GRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIY 593
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+LI G V L L +++ + PDI T+N +I +C + KA K F +
Sbjct: 594 NVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKC 653
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+P+ +++ LI A K GR D+A F SM + G P+ T + +++ + E
Sbjct: 654 GRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTES 713
Query: 484 AHDI 487
A ++
Sbjct: 714 AFEL 717
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/488 (23%), Positives = 218/488 (44%), Gaps = 8/488 (1%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQ-CKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
+Y V ++ +K ++ L F + V++ P N ++ G+C + A
Sbjct: 207 VYEFVFNSFLKRGEVEKG-LNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDM 265
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M G +PN+ T++ LI+ +C R+ E F + +M E+ + P+ L++G+FR
Sbjct: 266 MVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGK 325
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+ L + R ++ ++++ +A + +M G P T+
Sbjct: 326 LEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSI 385
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L + E CG+ +K+G++P TY L++ K+ +G + +
Sbjct: 386 LINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKG 445
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
V +V +M+I+ + MMD A + R + N FN LI G + + +TR
Sbjct: 446 HVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFR---LKRTR 502
Query: 311 ELLVMLLECGFK---PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ L M + G PD T+ ++ L R ++AL ++++ G P+ I Y LI
Sbjct: 503 DGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLI 562
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
C D A L++F+ MQ++ I PDI +N LI F R +E + ++ GL
Sbjct: 563 DGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLE 622
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD +Y+ +I F +A + F ++ P++ T ++++ + GR ++A I
Sbjct: 623 PDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLI 682
Query: 488 VKTSKERG 495
+ ERG
Sbjct: 683 FSSMLERG 690
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 139/282 (49%)
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
Y + + K G +G + + + LV + N ++ C N + A++
Sbjct: 205 LGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFD 264
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
M +PNLVTF+TLI+ +CK+ + + L +++E G PD ++ +I+ L RA
Sbjct: 265 MMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAG 324
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ E+ S + GV + + ++ ++ + +GD+ +++ ++ +M + ISP++ T++
Sbjct: 325 KLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYS 384
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI CR ++ +A F +L GL P +YS+LI KS + + M +
Sbjct: 385 ILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRK 444
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
G PD ++++ L +QG +EA + +RG++ ++
Sbjct: 445 GHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNY 486
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 141/323 (43%), Gaps = 35/323 (10%)
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
++RG+ P+ +++ L + + + + + N+ +++ +I+ +CK
Sbjct: 230 ALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKEL 289
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+D A + M ++ I P+LV ++ LI+G + ++ + L M L G K D F+
Sbjct: 290 RLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFS 349
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
S++D R A++ + M++ G+ PN +TY+ILI LC G V + +F ++
Sbjct: 350 SIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQ 409
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ P + T+++LI FC+ + + ML G PD S LI L + G DEA
Sbjct: 410 GLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEA 469
Query: 450 KQTFLSMEQNGCN-----------------------------------PDSYTSNLILET 474
+ F + G PD T ++++
Sbjct: 470 LRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKG 529
Query: 475 LVQQGRFEEAHDIVKTSKERGIS 497
L +QGR +EA + ++G S
Sbjct: 530 LAEQGRLDEALALFFQLLKKGFS 552
>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
Length = 671
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 237/469 (50%), Gaps = 16/469 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I+ + ++P T YN V+ L + + A ++M + C P+ T+ I C+ G+
Sbjct: 207 IASMPVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGL 266
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM--KERNVCPNEATV 118
+D A+ L++QM G P+V Y+ L++GF RV E ++L M + VC N A
Sbjct: 267 LDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALK 326
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
+ G + + EL+ + ++ +TL+ L N + A +L +M
Sbjct: 327 GLCIAGRW-----EEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQK 381
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
GY+P+ +++ ++C ++ +L + + KP ++ +++ L KA R +
Sbjct: 382 YGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYD 438
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + K N ++N++ID C+ + A E+ M P++VT+++LI+
Sbjct: 439 AVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLIN 498
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G + +L + C + D F++N+ + LC A R++DA + +++MV P
Sbjct: 499 GFSEQGLDEMAFDLF-RSMPC--RADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLP 555
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N +T+NILI SLC G V R++ ++++M I+PDI+T+NALI + +++ A K F
Sbjct: 556 NEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALK-F 614
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
S T+ PD SY++++K L ++ R+ +A++ M + C P+ T
Sbjct: 615 LS--TMPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVT 661
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 227/458 (49%), Gaps = 13/458 (2%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D ++N L+ G CR G + +A R+V+ G A NV TYT LIDG+C + R+A+ R++
Sbjct: 149 DAVSHNTLVAGYCRDGSLGDAERVVEAARASGTA-NVVTYTALIDGYCRSGRLADALRLI 207
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
M V P+ T +++ G+ +A EL+ + ++ T + N
Sbjct: 208 ASMP---VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQN 264
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
+ A +L +M G P+ + V ++E +L+T + R P Y
Sbjct: 265 GLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR---PNTVCY 321
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
++ L AGR E + + + N +++ +I+ C+ +++ A E+ +M+
Sbjct: 322 NAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQK 381
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
P++V++NT+IS A +LL +L KPD +FN+++ CLC+A R+ D
Sbjct: 382 YGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYD 438
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A++ +++M++ N +T+NILI SLC G V ++ +F+ M R PDI T+++LI
Sbjct: 439 AVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLIN 498
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
F E A F SM R D FSY+A +K L + R+D+A + M C P
Sbjct: 499 GFSEQGLDEMAFDLFRSM---PCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLP 555
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ T N+++ +L Q+G A D+ + + GI+ F
Sbjct: 556 NEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIF 593
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 179/361 (49%), Gaps = 19/361 (5%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+T YNA + L + + +M C P+ T++ LI+ +C+ +V+ A+ +
Sbjct: 316 PNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEV 375
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVHGVF 126
++QM+ GY P+V +Y +I F + R + ++L+ M +C P+ + +++ +
Sbjct: 376 LEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSM----LCKPDTISFNAVLKCLC 431
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + A EL+ + ++++ ++ N L+ L N +A + M +P+
Sbjct: 432 KAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIV 491
Query: 187 TFDYTVTCLVTGLD---LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-DVEGDRY 242
T+ + L+ G L+E D F + +Y ++ L A R D G+
Sbjct: 492 TY----SSLINGFSEQGLDEMA--FDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELI 545
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ V +D L + V ++N++I C+ +++RA ++ +M I P++ T+N LI+G+
Sbjct: 546 ADMVTEDCLPNEV-TFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGY-- 602
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+E + + L L +PD ++NS++ LCRA R++DA ++EM+ PN +T
Sbjct: 603 -SEQGRLDDALKFLSTMPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVT 661
Query: 363 Y 363
+
Sbjct: 662 F 662
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
PP I+ NILI+ LCA +A + R+ + ++A + D + N L+ +CR + AE+
Sbjct: 113 PPAVISCNILIKKLCARRRLADAERVLEALKASGAA-DAVSHNTLVAGYCRDGSLGDAER 171
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
+ G + +Y+ALI +SGR +A + SM PD+YT N +L+ L
Sbjct: 172 VVEAARASGT-ANVVTYTALIDGYCRSGRLADALRLIASMP---VAPDTYTYNTVLKGLC 227
Query: 477 QQGRFEEAHDIVK 489
++E+A ++++
Sbjct: 228 CAKQWEQAEELMR 240
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 32/139 (23%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YNA + L + D A M + C P+ T+NILI +C+ G+V+ A+ + +QM
Sbjct: 525 YNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMP 584
Query: 73 GLGYAPNVYTYTILIDGF--------------------------------CNAKRVAEVF 100
G P+++TY LI+G+ C A+R +
Sbjct: 585 KYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCEPDTISYNSILKGLCRAERWKDAE 644
Query: 101 RVLEIMKERNVCPNEATVR 119
+++ M +N PNE T +
Sbjct: 645 KLVTEMLRKNCTPNEVTFK 663
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 221/494 (44%), Gaps = 3/494 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ + + N++I+ K I A +M KPD ++YN L+ G CR G E
Sbjct: 327 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 386
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L +M G P V TY L+ G C + ++ +M +R V P+E +L+
Sbjct: 387 AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLD 446
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+F+ + A L + R ++ NT++ L EA I KM D G P
Sbjct: 447 GLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP 506
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ + ++ + + + + P Y L+ L+K+ R VE L
Sbjct: 507 DGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLL 566
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ L N+ +Y +ID +CK M+D+A EM + ++ N++ +T++SG +
Sbjct: 567 TEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRL 626
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + L+ +++ GF PD F + R + D L E + + PN I Y
Sbjct: 627 GRIDEANLLMQKMVDHGFFPDHECF---LKSDIRYAAIQKIADSLDESCKTFLLPNNIVY 683
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI I LC G V + R F + PD +T+ LI + +++A + ML
Sbjct: 684 NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLR 743
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL P+ +Y+ALI L KS D A++ F + Q G P+ T N +++ + G +
Sbjct: 744 RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDA 803
Query: 484 AHDIVKTSKERGIS 497
A + E GIS
Sbjct: 804 AFKLKDKMIEEGIS 817
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 134/497 (26%), Positives = 234/497 (47%), Gaps = 11/497 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS R N++++ LVK+ A+ +QQM PD F +I+++ C+ G VDEA
Sbjct: 152 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEA 211
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
VK+ME LG PN+ TY LI+G+ + V VL+ M E+ V N T L+ G
Sbjct: 212 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 271
Query: 125 VFRCLDPHKAFELLIRFMEREP--LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ +A E ++R M+ E + + L+ +A +L +M G
Sbjct: 272 YCKQCKMDEA-EKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGL- 329
Query: 183 PESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
T + L+ G +++E G++ + +KP +Y L++ + G E
Sbjct: 330 ---KTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 386
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + ++ + V +YN ++ C+V D A +I M R +AP+ V ++TL+
Sbjct: 387 AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLD 446
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G K L +L GF + TFN+MI LC+ + +A + +M + G P
Sbjct: 447 GLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP 506
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ ITY LI C +V ++ ++ M+ + ISP I +N+LI + ++ +
Sbjct: 507 DGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLL 566
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M GL P+ +Y ALI K G D+A ++ M +NG + + + ++ L +
Sbjct: 567 TEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRL 626
Query: 479 GRFEEAHDIVKTSKERG 495
GR +EA+ +++ + G
Sbjct: 627 GRIDEANLLMQKMVDHG 643
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 224/491 (45%), Gaps = 3/491 (0%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
S +++ ++ V+ A F M P + N L++ + + G A +
Sbjct: 121 SPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVY 180
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
+QM +G P+V+ +I+++ FC +V E ++ M+ V PN T SL++G +
Sbjct: 181 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLING-YVS 239
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYL-PESS 186
L +A + +++FM + +++ +V TLL + EA +LR M + L P+
Sbjct: 240 LGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDER 299
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ + +++ +LD ++ G+K L+ K G E + + +
Sbjct: 300 AYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRM 359
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
L + SYN ++D +C+ A +C +M I P ++T+NTL+ G C+
Sbjct: 360 VDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAF 419
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
++ ++++ G PD+ +++++D L + FE A +++ G + IT+N +
Sbjct: 420 DDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTM 479
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I LC +G + + +F KM+ SPD T+ LI +C+ + + +A K +M +
Sbjct: 480 ISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPI 539
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P Y++LI L KS R E M G P+ T +++ ++G ++A
Sbjct: 540 SPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFS 599
Query: 487 IVKTSKERGIS 497
E G+S
Sbjct: 600 SYFEMTENGLS 610
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/516 (22%), Positives = 234/516 (45%), Gaps = 26/516 (5%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS L S + +AV+ L + + L + +F +P+ +Y L+H + R +
Sbjct: 25 ISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQ-QNFRPNVKSYCKLVHILSRGRM 83
Query: 61 VDEALRLVKQMEGL---------------------GYAPNVYTYTILIDGFCNAKRVAEV 99
DE + Q+ L ++P V+ +++ +
Sbjct: 84 YDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFD--MILKVYVEKGLTKNA 141
Query: 100 FRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
V + M + P+ + SL++ + + + H A + + + + + + ++
Sbjct: 142 LYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNA 201
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
+ EAA ++KM + G P T+ + V+ D+ G+L ++GV
Sbjct: 202 FCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRN 261
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEIC 278
TY LL++ K + E ++ L + ++ LV + +Y ++ID +C+ +D A +
Sbjct: 262 VVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLL 321
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
EM + NL N+LI+G+CK E+H+ ++ +++ KPD +++N+++D CR
Sbjct: 322 DEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCRE 381
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+A + +M++ G+ P +TYN L++ LC +G +L+++ M ++PD +
Sbjct: 382 GHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGY 441
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+ L+ +M E A + +L G +++ +I L K G+ EA++ F M+
Sbjct: 442 STLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD 501
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
GC+PD T +++ + +A VK + ER
Sbjct: 502 LGCSPDGITYRTLIDGYCKASNVGQAFK-VKGAMER 536
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G P Y +I + ++D A+ +M P+ TYN LI+G+C+
Sbjct: 706 LSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 765
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPN 114
VD A RL ++ G PNV TY LIDG+C + F++ + M E + P+
Sbjct: 766 VDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPS 819
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YNA+I+ L KS ++D A F ++ P+ TYN LI G C+IG +D A
Sbjct: 745 GLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAA 804
Query: 65 LRLVKQMEGLGYAPNV 80
+L +M G +P++
Sbjct: 805 FKLKDKMIEEGISPSI 820
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 218/460 (47%), Gaps = 2/460 (0%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGY--APNVYTYTILIDGFCNAKRVAE 98
C PD F+Y+IL+ +C G +A L++ M G +P+V Y+ +IDGF V +
Sbjct: 178 CVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNK 237
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
+ + M +R + P+ T S+VH + + KA L + + + L N L+Y
Sbjct: 238 ACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIY 297
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
S+ EA + ++M LP+ T + L + E + DT +G P
Sbjct: 298 GYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP 357
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
+Y +++ G V+ + + D + ++ ++N++I + M+D+A I
Sbjct: 358 NVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIF 417
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
EMRD + P++VT+ T+I+ C+ ++ E +++ G PDK+ ++ +I C
Sbjct: 418 NEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTH 477
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
A + +SE++ G+ + + ++ +I +LC +G V + +F + P +
Sbjct: 478 GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVY 537
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+ L+ +C + K+EKA + F +M++ G+ P++ Y L+ K GR DE F M Q
Sbjct: 538 SMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQ 597
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
G P + N+I++ L + GR A E GI+
Sbjct: 598 KGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAM 637
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 217/486 (44%), Gaps = 51/486 (10%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP Y+ VID K ++ A F++M PD TY+ ++H +C+ +D+A
Sbjct: 216 SPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEA 275
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++QM G PN +TY LI G+ + + E RV + M+ ++ P+ T+
Sbjct: 276 FLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL-------- 327
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ L+ L EA + M +G P +
Sbjct: 328 ---------------------------SMLMGSLCKYGKIKEARDVFDTMAMKGQNP--N 358
Query: 187 TFDYTVT--------CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
F YT+ CLV DL D + G+ P T+ +L++A G +
Sbjct: 359 VFSYTIMLNGYATKGCLVDMTDL------FDLMLGDGIAPDIYTFNVLIKAYANCGMLDK 412
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
N + + +V +Y VI C++ MD A E +M D+ +AP+ ++ LI
Sbjct: 413 AMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQ 472
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G C + K +EL+ ++ G D F+S+I+ LC+ R DA + V G+ P
Sbjct: 473 GFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 532
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ Y++L+ C +G + ++LR+F M + I P+ + L+ +C++ +I++ F
Sbjct: 533 TAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLF 592
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
ML G++P Y+ +I L ++GR AK F M ++G + T N++L L +
Sbjct: 593 REMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKN 652
Query: 479 GRFEEA 484
F+EA
Sbjct: 653 RCFDEA 658
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 143/534 (26%), Positives = 242/534 (45%), Gaps = 43/534 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P Y++V+ AL K+ ++D A +QM P+ +TYN LI+G G EA
Sbjct: 249 GIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEA 308
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+R+ K+M P+V T ++L+ C ++ E V + M + PN + +++G
Sbjct: 309 VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNG 368
Query: 125 VFR--CL-DPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRG 180
CL D F+L++ + + + N L+ +N M +A I +M D G
Sbjct: 369 YATKGCLVDMTDLFDLML----GDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T+ + L +++ + I +GV P Y L++ G ++
Sbjct: 425 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAK 484
Query: 241 R----------YLNHVFKDRLVSN-----------------VN--------SYNMVIDCF 265
+L+ VF +++N VN Y+M++D +
Sbjct: 485 ELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGY 544
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C V M++A + M I PN V + TL++G+CK + + L +L+ G KP
Sbjct: 545 CLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPST 604
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
+N +ID L A R A EM E G+ N TYNI++R L ++ LF++
Sbjct: 605 ILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKE 664
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
++A + +I T N +I + ++E+A+ F S+ GL P +YS +I LIK G
Sbjct: 665 LRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGL 724
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
+EA+ F SM+ GC PDS N ++ L+++ A + ER S +
Sbjct: 725 VEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 778
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 177/404 (43%), Gaps = 6/404 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P +N +I A +D A + F +M KPD TY +I +CRIG +D+A
Sbjct: 389 GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 448
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ QM G AP+ Y Y LI GFC + + ++ + + + S+++
Sbjct: 449 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 508
Query: 125 V---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ R +D F+L + + P +V + L+ +A + M G
Sbjct: 509 LCKLGRVMDAQNIFDLTVN-VGLHP--TAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P + V ++E + +++G+KP Y ++++ L++AGR V
Sbjct: 566 EPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 625
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + + + N +YN+V+ K D A + +E+R ++ N++T NT+I+G
Sbjct: 626 KFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMF 685
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ V + ++L + G P T++ MI L + E+A D S M G P++
Sbjct: 686 QTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSR 745
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
N ++R L ++ R+ K+ S + T L+ F
Sbjct: 746 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLF 789
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 144/321 (44%), Gaps = 38/321 (11%)
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
R + P TY +LM+ +A R + + + L N+ N ++ FC+ D
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDE 164
Query: 274 ATEI------------------------CREMRDRDI--------------APNLVTFNT 295
A +I C + + +P++V ++T
Sbjct: 165 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYST 224
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
+I G K+ +V+K +L +++ G PD T++S++ LC+A + A L +MV G
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
V PN TYN LI + G ++R+F++M+ I PD+ T + L+ S C+ KI++A
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 344
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
F +M G P+ FSY+ ++ G + F M +G PD YT N++++
Sbjct: 345 DVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAY 404
Query: 476 VQQGRFEEAHDIVKTSKERGI 496
G ++A I ++ G+
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGV 425
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 102/248 (41%), Gaps = 10/248 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ +Y+ ++D ++ A F M +P+ Y L++G C+IG +DE
Sbjct: 528 VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDE 587
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L L ++M G P+ Y I+IDG A R M E + N+ T ++
Sbjct: 588 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLR 647
Query: 124 GVF--RCLDPHKAFELLIRFMEREPLTQK---LVCNTLLYRLSNNSMASEAAAILRKMGD 178
G+F RC D E + F E + K + NT++ + EA + +
Sbjct: 648 GLFKNRCFD-----EAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISR 702
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G +P T+ +T L+ + E + + G +P ++ L K V
Sbjct: 703 SGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVR 762
Query: 239 GDRYLNHV 246
YL+ +
Sbjct: 763 AGAYLSKI 770
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSL--------CAIGD---VARSLRLFQKMQA 388
R E+A D L E+ G P N + +L C G VA R + Q
Sbjct: 44 RPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQG 103
Query: 389 DRI-SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
R+ SP +T+ L+ R ++ E A F +L GLR + + L+K ++ R D
Sbjct: 104 PRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTD 163
Query: 448 EAKQTFLS-MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
EA L + GC PD ++ +++L++L QG+ +A D+++ E G
Sbjct: 164 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGG 212
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 221/494 (44%), Gaps = 3/494 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ + + N++I+ K I A +M KPD ++YN L+ G CR G E
Sbjct: 361 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 420
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L +M G P V TY L+ G C + ++ +M +R V P+E +L+
Sbjct: 421 AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLD 480
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+F+ + A L + R ++ NT++ L EA I KM D G P
Sbjct: 481 GLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP 540
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ + ++ + + + + P Y L+ L+K+ R VE L
Sbjct: 541 DGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLL 600
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ L N+ +Y +ID +CK M+D+A EM + ++ N++ +T++SG +
Sbjct: 601 TEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRL 660
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + L+ +++ GF PD F + R + D L E + + PN I Y
Sbjct: 661 GRIDEANLLMQKMVDHGFFPDHECF---LKSDIRYAAIQKIADSLDESCKTFLLPNNIVY 717
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI I LC G V + R F + PD +T+ LI + +++A + ML
Sbjct: 718 NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLR 777
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL P+ +Y+ALI L KS D A++ F + Q G P+ T N +++ + G +
Sbjct: 778 RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDA 837
Query: 484 AHDIVKTSKERGIS 497
A + E GIS
Sbjct: 838 AFKLKDKMIEEGIS 851
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 134/497 (26%), Positives = 234/497 (47%), Gaps = 11/497 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS R N++++ LVK+ A+ +QQM PD F +I+++ C+ G VDEA
Sbjct: 186 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEA 245
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
VK+ME LG PN+ TY LI+G+ + V VL+ M E+ V N T L+ G
Sbjct: 246 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 305
Query: 125 VFRCLDPHKAFELLIRFMEREP--LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ +A E ++R M+ E + + L+ +A +L +M G
Sbjct: 306 YCKQCKMDEA-EKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGL- 363
Query: 183 PESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
T + L+ G +++E G++ + +KP +Y L++ + G E
Sbjct: 364 ---KTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 420
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + ++ + V +YN ++ C+V D A +I M R +AP+ V ++TL+
Sbjct: 421 AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLD 480
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G K L +L GF + TFN+MI LC+ + +A + +M + G P
Sbjct: 481 GLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP 540
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ ITY LI C +V ++ ++ M+ + ISP I +N+LI + ++ +
Sbjct: 541 DGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLL 600
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M GL P+ +Y ALI K G D+A ++ M +NG + + + ++ L +
Sbjct: 601 TEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRL 660
Query: 479 GRFEEAHDIVKTSKERG 495
GR +EA+ +++ + G
Sbjct: 661 GRIDEANLLMQKMVDHG 677
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 204/449 (45%), Gaps = 38/449 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P Y+ ++D L K + + A ++ + R T+N +I G+C++G + EA
Sbjct: 467 GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 526
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M+ LG +P+ TY LIDG+C A V + F+V M+ + P+ SL+ G
Sbjct: 527 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISG 586
Query: 125 VF-----------------RCLDPH------------------KAFELLIRFMEREPLTQ 149
+F R L P+ KAF E
Sbjct: 587 LFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSAN 646
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
++C+T++ L EA +++KM D G+ P+ F + + + + LD
Sbjct: 647 IIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF---LKSDIRYAAIQKIADSLD 703
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
K + P Y + + L K G+ + R+ + + V + +Y +I +
Sbjct: 704 ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 763
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+D A + EM R + PN+VT+N LI+G CK V + + L L + G P+ T+N
Sbjct: 764 NVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYN 823
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++ID C+ + A +M+E G+ P+ +TY+ LI LC GD+ RS++L +M
Sbjct: 824 TLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKA 883
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ + + L+Q + R +++K K +
Sbjct: 884 GVDSKLIEYCTLVQGYIRSGEMQKIHKLY 912
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 224/491 (45%), Gaps = 3/491 (0%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
S +++ ++ V+ A F M P + N L++ + + G A +
Sbjct: 155 SPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVY 214
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
+QM +G P+V+ +I+++ FC +V E ++ M+ V PN T SL++G +
Sbjct: 215 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLING-YVS 273
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYL-PESS 186
L +A + +++FM + +++ +V TLL + EA +LR M + L P+
Sbjct: 274 LGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDER 333
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ + +++ +LD ++ G+K L+ K G E + + +
Sbjct: 334 AYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRM 393
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
L + SYN ++D +C+ A +C +M I P ++T+NTL+ G C+
Sbjct: 394 VDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAF 453
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
++ ++++ G PD+ +++++D L + FE A +++ G + IT+N +
Sbjct: 454 DDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTM 513
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I LC +G + + +F KM+ SPD T+ LI +C+ + + +A K +M +
Sbjct: 514 ISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPI 573
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P Y++LI L KS R E M G P+ T +++ ++G ++A
Sbjct: 574 SPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFS 633
Query: 487 IVKTSKERGIS 497
E G+S
Sbjct: 634 SYFEMTENGLS 644
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/516 (22%), Positives = 234/516 (45%), Gaps = 26/516 (5%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS L S + +AV+ L + + L + +F +P+ +Y L+H + R +
Sbjct: 59 ISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQ-QNFRPNVKSYCKLVHILSRGRM 117
Query: 61 VDEALRLVKQMEGL---------------------GYAPNVYTYTILIDGFCNAKRVAEV 99
DE + Q+ L ++P V+ +++ +
Sbjct: 118 YDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFD--MILKVYVEKGLTKNA 175
Query: 100 FRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
V + M + P+ + SL++ + + + H A + + + + + + ++
Sbjct: 176 LYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNA 235
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
+ EAA ++KM + G P T+ + V+ D+ G+L ++GV
Sbjct: 236 FCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRN 295
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEIC 278
TY LL++ K + E ++ L + ++ LV + +Y ++ID +C+ +D A +
Sbjct: 296 VVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLL 355
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
EM + NL N+LI+G+CK E+H+ ++ +++ KPD +++N+++D CR
Sbjct: 356 DEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCRE 415
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+A + +M++ G+ P +TYN L++ LC +G +L+++ M ++PD +
Sbjct: 416 GHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGY 475
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+ L+ +M E A + +L G +++ +I L K G+ EA++ F M+
Sbjct: 476 STLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD 535
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
GC+PD T +++ + +A VK + ER
Sbjct: 536 LGCSPDGITYRTLIDGYCKASNVGQAFK-VKGAMER 570
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 70/138 (50%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G P Y +I + ++D A+ +M P+ TYN LI+G+C+
Sbjct: 740 LSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 799
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD A RL ++ G PNV TY LIDG+C + F++ + M E + P+ T +
Sbjct: 800 VDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSA 859
Query: 121 LVHGVFRCLDPHKAFELL 138
L++G+ + D ++ +LL
Sbjct: 860 LINGLCKHGDIERSMKLL 877
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 56/105 (53%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN +ID K ++D A+ +M + P TY+ LI+G+C+ G ++ +
Sbjct: 814 GLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERS 873
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER 109
++L+ QM G + Y L+ G+ + + ++ ++ ++M R
Sbjct: 874 MKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIR 918
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 227/482 (47%), Gaps = 39/482 (8%)
Query: 41 CKPDRFTYNILIHGIC---RIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVA 97
C PD F+Y I++ +C + G DE LR++ + G PN Y +IDGF V
Sbjct: 175 CVPDVFSYCIVLKSLCSDRKSGQADELLRMMAE-GGAVCLPNAVAYNTVIDGFFKEGDVN 233
Query: 98 EVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL 157
+ + M +R + P+ +T +V+ + + KA +L + +++ L N+L+
Sbjct: 234 KACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLI 293
Query: 158 YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK 217
Y S+ EA + +KM +G LP+ T + + L + + + D+ +G K
Sbjct: 294 YGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQK 353
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
+Y +++ G V+ N + D + + + +N++I + K M+DRAT I
Sbjct: 354 TDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATII 413
Query: 278 CREMRDRDIAPNLVTFNT-----------------------------------LISGHCK 302
EMR++ + P++VT++T LI G C
Sbjct: 414 FNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCT 473
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ K ++L++ ++ G +PD FN +I+ LC+ R DA + + G+ PN +
Sbjct: 474 HGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMV 533
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN L+ C +G + +LR+F M + I P++ + L+ +C++ +I++ F +L
Sbjct: 534 YNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREIL 593
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G++P Y+ ++ L ++GR AK F M ++G D YT +++L L + +
Sbjct: 594 HKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSD 653
Query: 483 EA 484
EA
Sbjct: 654 EA 655
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 133/530 (25%), Positives = 233/530 (43%), Gaps = 36/530 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP YN V++AL K+ ++D A +QM PD +TYN LI+G G EA
Sbjct: 246 GISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEA 305
Query: 65 LRLVKQMEGLGYAPNV-----------------------------------YTYTILIDG 89
+R+ K+M G P+V ++Y I+++G
Sbjct: 306 VRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNG 365
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
+ + ++ + +M + P+ L+ +C +A + E+
Sbjct: 366 YATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPD 425
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ +T++ L +A +M D+G P ST+ + + T DL + ++
Sbjct: 426 VVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVL 485
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+ +G++P + ++ L K GR ++ + L NV YN ++D +C V
Sbjct: 486 QMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVG 545
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
M+ A + M I PN+V + TL++G+CK + + L +L G KP +N
Sbjct: 546 KMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYN 605
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++ L +A R A EM E G+ + TY+I++ L ++ LF+++ A
Sbjct: 606 IILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAM 665
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ DI T N +I ++ ++E+A+ F S+ GL P +YS ++ LIK G +EA
Sbjct: 666 NVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEA 725
Query: 450 KQTFLSMEQNGC-NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
F SME GC P+S N ++ L+++ A + ER S
Sbjct: 726 DDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSL 775
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 87/179 (48%), Gaps = 3/179 (1%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
P T+ ++DC RAHR + L ++++ G+ +TI + L+R LC A +L
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEAL 163
Query: 381 R-LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL--RPDNFSYSALI 437
L +M PD++++ +++S C K +A++ M G P+ +Y+ +I
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVI 223
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
K G ++A F M Q G +PD T N ++ L + ++A I++ ++G+
Sbjct: 224 DGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGV 282
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/476 (27%), Positives = 229/476 (48%), Gaps = 6/476 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ ++++++DA V+ + A + +M + P+ TY+ILI+G+CR G V EA
Sbjct: 340 GVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEA 399
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ Q+ G P+V TY+ LIDGFC ++ + + F + IM + P+ L++G
Sbjct: 400 CGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLING 459
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R +A + ++R + N L+ + + MG +P+
Sbjct: 460 LSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPD 519
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ V L L+E + +K+G P Y L++ K G +
Sbjct: 520 VVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFK 579
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + ++ YN++I+ F + ++ E+ RE+ + P++VT+NT+I G+C
Sbjct: 580 LMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLK 639
Query: 305 EVHKTRELLVMLLECG-FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
K +L +L+CG +P+ TF +ID C+ R +DA+ S M+E G PN +TY
Sbjct: 640 IFSKAIKLF-EVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTY 698
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+ LI + + L++KM DR+SP+I +++ LI C+ +E+A AF +
Sbjct: 699 SCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIG 758
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
L PD +Y LI+ K GR EA + M NG PD +L+ + L + G
Sbjct: 759 RHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD----DLLQKALAEYG 810
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 221/484 (45%), Gaps = 43/484 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +Y+ +I+ L ++ ++ F K D ++ ++ R+G + +A
Sbjct: 305 GIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKA 364
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + +M G +PNV TY+ILI+G C RV E V + ++ + P+ T SL+ G
Sbjct: 365 IEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDG 424
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + F L + + + +VC+ L+ LS M EA + RG
Sbjct: 425 FCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGL--- 481
Query: 185 SSTFDYTVTCLVTG-LDLNETCGILDTFIKRG---VKPRFSTYLLLMEALYKAGRDVEGD 240
+ +Y L+ G L T L +I G V P TY +L++ L + GR
Sbjct: 482 -TLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGR----- 535
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+D A + ++ + +P+ + + TLI G
Sbjct: 536 ------------------------------LDEALALFFQLLKKGFSPDHIIYCTLIDGF 565
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK + ++ ++ G PD +N +I+ R E+ L+ L E++++G+ P+
Sbjct: 566 CKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDI 625
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TYN +I C++ +++++LF+ ++ R P+ TF LI ++C+ +++ A F S
Sbjct: 626 VTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSS 685
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
ML G P+ +YS LI K+ + A + + M + +P+ + +++++ L ++G
Sbjct: 686 MLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGL 745
Query: 481 FEEA 484
EEA
Sbjct: 746 MEEA 749
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/489 (22%), Positives = 215/489 (43%), Gaps = 9/489 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+TR+++ ++ + + F+ + Y+ L+H CR G+VD A+
Sbjct: 107 PATRVFDRMVGQFGNLEVLGEFHGSFRNYGSNPST----VYSFLLHCYCRNGMVDRAVDT 162
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
M +G + + Y + ++D ++ R+ + E M C + + +
Sbjct: 163 FAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEM-----CKGLGVYEFVFNSFLK 217
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ K +ER + + + CN +L L + A+ M G P T
Sbjct: 218 RGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVT 277
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
F + L L+E + + I++G+ P Y +L+ L++AG+ EG+ +
Sbjct: 278 FSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMAL 337
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ +V ++ ++D + +V + +A E+ M I+PN+VT++ LI+G C++ V
Sbjct: 338 ARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVL 397
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ + +L+ G +P T++S+ID C++ D M+ G P+ + ++LI
Sbjct: 398 EACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLI 457
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
L G + +LR F + ++ + Y FNALI R+ + K + M +
Sbjct: 458 NGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVI 517
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD +Y+ L+K L + GR DEA F + + G +PD +++ ++ I
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQI 577
Query: 488 VKTSKERGI 496
K + GI
Sbjct: 578 FKLMQSNGI 586
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 209/484 (43%), Gaps = 2/484 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P N ++ L N I +A F M P+ T++ LI+ C+ +DEA
Sbjct: 235 GLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEA 294
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L M G P++ Y+ILI+G A ++ E + + R V + S++
Sbjct: 295 FSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDA 354
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLP 183
R D KA E+ R M +E ++ +V ++L L N EA + ++ +G P
Sbjct: 355 YVRVGDLGKAIEVYTR-MLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEP 413
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ + +L + G+ +++G P +L+ L + G E R+
Sbjct: 414 SVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFF 473
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
K L N +N +ID ++ ++ M + P++VT+ L+ G +
Sbjct: 474 FQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQ 533
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + L LL+ GF PD + ++ID C+ L M G+ P+ Y
Sbjct: 534 GRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIY 593
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+LI G V L L +++ + PDI T+N +I +C + KA K F +
Sbjct: 594 NVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKC 653
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+P+ +++ LI A K GR D+A F SM + G P+ T + +++ + E
Sbjct: 654 GRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTES 713
Query: 484 AHDI 487
A ++
Sbjct: 714 AFEL 717
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/488 (23%), Positives = 218/488 (44%), Gaps = 8/488 (1%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQ-CKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
+Y V ++ +K ++ L F + V++ P N ++ G+C + A
Sbjct: 207 VYEFVFNSFLKRGEVEKG-LNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDM 265
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M G +PN+ T++ LI+ +C R+ E F + +M E+ + P+ L++G+FR
Sbjct: 266 MVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGK 325
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+ L + R ++ ++++ +A + +M G P T+
Sbjct: 326 LEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSI 385
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L + E CG+ +K+G++P TY L++ K+ +G + +
Sbjct: 386 LINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKG 445
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
V +V +M+I+ + MMD A + R + N FN LI G + + +TR
Sbjct: 446 HVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFR---LKRTR 502
Query: 311 ELLVMLLECGFK---PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ L M + G PD T+ ++ L R ++AL ++++ G P+ I Y LI
Sbjct: 503 DGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLI 562
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
C D A L++F+ MQ++ I PDI +N LI F R +E + ++ GL
Sbjct: 563 DGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLE 622
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD +Y+ +I F +A + F ++ P++ T ++++ + GR ++A I
Sbjct: 623 PDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLI 682
Query: 488 VKTSKERG 495
+ ERG
Sbjct: 683 FSSMLERG 690
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 139/281 (49%)
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
Y + + K G +G + + + LV + N ++ C N + A++
Sbjct: 206 GVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDM 265
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M +PNLVTF+TLI+ +CK+ + + L +++E G PD ++ +I+ L RA +
Sbjct: 266 MVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGK 325
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
E+ S + GV + + ++ ++ + +GD+ +++ ++ +M + ISP++ T++
Sbjct: 326 LEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSI 385
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI CR ++ +A F +L GL P +YS+LI KS + + M + G
Sbjct: 386 LINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKG 445
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
PD ++++ L +QG +EA + +RG++ ++
Sbjct: 446 HVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNY 486
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 141/323 (43%), Gaps = 35/323 (10%)
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
++RG+ P+ +++ L + + + + + N+ +++ +I+ +CK
Sbjct: 230 ALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKEL 289
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+D A + M ++ I P+LV ++ LI+G + ++ + L M L G K D F+
Sbjct: 290 RLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFS 349
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
S++D R A++ + M++ G+ PN +TY+ILI LC G V + +F ++
Sbjct: 350 SIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQ 409
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ P + T+++LI FC+ + + ML G PD S LI L + G DEA
Sbjct: 410 GLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEA 469
Query: 450 KQTFLSMEQNGCN-----------------------------------PDSYTSNLILET 474
+ F + G PD T ++++
Sbjct: 470 LRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKG 529
Query: 475 LVQQGRFEEAHDIVKTSKERGIS 497
L +QGR +EA + ++G S
Sbjct: 530 LAEQGRLDEALALFFQLLKKGFS 552
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 66/123 (53%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y+ +ID K+ + + A+ +++M D+ P+ +Y+ILI G+C+ G+++EA
Sbjct: 690 GPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEA 749
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ G P+V Y ILI G+C R+AE + + M + P++ ++L
Sbjct: 750 SLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEY 809
Query: 125 VFR 127
F+
Sbjct: 810 GFQ 812
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/521 (25%), Positives = 235/521 (45%), Gaps = 69/521 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P T +N +I +L +SN++D A F +MS C+P++FT IL+ G CR G +A
Sbjct: 146 GVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQA 205
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L V +G N Y L+ FC E +++E M E+ + P+ T S +
Sbjct: 206 LEFVDGK--MGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISA 263
Query: 125 VFRCLDPHKAFEL--LIRFMERE-----PLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
+ R K FE + R M+ + P + N +L M EA +++ M
Sbjct: 264 LCRA---GKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMK 320
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
G +++ + L+ L E +LD ++ G++P
Sbjct: 321 KGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEP------------------- 361
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
N+ SYN+V+D C+ +MM A + M + P+ VT+ TL+
Sbjct: 362 ----------------NIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLL 405
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G+C +V + + +L ++ G P+ +T N++++ L + R +A + L +M E
Sbjct: 406 HGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQ 465
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS----------------------PDI 395
+T+T NI++ LC G++ ++ + +M D + PD+
Sbjct: 466 LDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDV 525
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
T+ LI C++ K+E+A+K F M+ L PD+ +Y + K G+ A +
Sbjct: 526 ITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKD 585
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
ME+NGC+ T N ++ L +G+ E + ++ +ERGI
Sbjct: 586 MERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGI 626
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 221/479 (46%), Gaps = 21/479 (4%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN + L+++ + +M + +P+ ++YNI++ G+CR ++ +A RL+ M
Sbjct: 331 YNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMV 390
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G P+ TYT L+ G+C+ +V E +L M + PN T +L++ +++
Sbjct: 391 SNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKS 450
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A E+L + E+ + CN ++ L N +A+ ++ +M G S + V
Sbjct: 451 EAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDG--TNSLGKENPV 508
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
LV + N + + P TY L+ L K G+ E + + L
Sbjct: 509 AGLVNSIH-NVSTNV----------PDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLH 557
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+ +Y+ + FCK + A + ++M + L T+N+LI G ++ + L
Sbjct: 558 PDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGL 617
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG-VPPNTITYNILIRSLC 371
+ + E G PD T+N+MI+CLC + +DA L EM++ G V PN ++ ILI++ C
Sbjct: 618 MDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFC 677
Query: 372 AIGDVARSLRLFQ-KMQADRISPDIYT--FNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
GD + LF + +Y+ FN L+ K+ A++ F + L L
Sbjct: 678 KSGDFKVACELFDVALSVCGHKEALYSLMFNELLAG----GKLSDAKELFEASLERSLLS 733
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
NF Y LI L K GR D+A + G D + +++ L ++G ++A ++
Sbjct: 734 KNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADEL 792
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 8/201 (3%)
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
H L +++ G P+ +TFN +I LC ++ + A + +M E G PN T IL
Sbjct: 133 HYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGIL 192
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+R C G ++L ++ +Y N L+ SFC+ + ++AEK M GL
Sbjct: 193 VRGFCRAGRTKQALEFVDGKMGGNVNRVVY--NTLVSSFCKQDMNDEAEKLVERMTEKGL 250
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG----CNPDSYTSNLILETLVQQGRFE 482
PD ++++ I AL ++G+ EA + F M+ +G P+ T NL+L+ Q+G E
Sbjct: 251 LPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMME 310
Query: 483 EAHDIVKTSKERG--ISFKSF 501
EA +V+T K+ G +S +S+
Sbjct: 311 EARSLVETMKKGGNFVSLESY 331
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 122/306 (39%), Gaps = 37/306 (12%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P Y +I+ L K ++ A KF +M PD TY+ + C+ G + ALR+
Sbjct: 523 PDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRV 582
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+K ME G + + TY LI G + ++ E++ +++ M+ER + P+ T ++++
Sbjct: 583 LKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMIN---- 638
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL-PESS 186
C L +A ++L +M D+G + P S
Sbjct: 639 C-------------------------------LCEGGKTKDATSLLHEMLDKGVVSPNVS 667
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+F + D C + D + + + Y L+ L G+ +
Sbjct: 668 SFKILIKAFCKSGDFKVACELFDVALSV-CGHKEALYSLMFNELLAGGKLSDAKELFEAS 726
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ L+S Y +ID CK +D A + +++ D+ + +F +I G K
Sbjct: 727 LERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNK 786
Query: 307 HKTREL 312
+ EL
Sbjct: 787 QQADEL 792
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 222/464 (47%), Gaps = 35/464 (7%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F++M + P +N L+ I ++ D + L K+ME LG ++YT+ I+I+ FC
Sbjct: 73 FREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCC 132
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
+V+ VL M + P+ T+ SLV+G R
Sbjct: 133 CFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCR------------------------- 167
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
+ S+A +++ KM + GY P+ ++ + L +N+
Sbjct: 168 ----------RNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIG 217
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
++G++P TY L+ L +GR + R L + K ++ NV +Y+ ++D F K +
Sbjct: 218 RKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVL 277
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A EI EM I P++VT+++LI+G C + + ++ +++ G PD ++N++I
Sbjct: 278 EAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLI 337
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
+ C+A R ED + +M + G+ NT+TYN LI+ +GDV ++ F +M + +S
Sbjct: 338 NGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVS 397
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PDI+T+N L+ C +EKA F M + D +Y+ +I+ + K+G+ ++A
Sbjct: 398 PDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGL 457
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
F S+ G PD T ++ L +G E + K+ G+
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGL 501
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 197/424 (46%), Gaps = 2/424 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ A+VK D+ ++M V + D +T+NI+I+ C V AL +
Sbjct: 83 PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSV 142
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P+ T L++GFC RV++ +++ M E P+ +++ + +
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCK 202
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A + + + R+ + +V T L+ L N+ ++AA +LR M R P
Sbjct: 203 TRRVNDALDFF-KEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVI 261
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + V + E I + ++ + P TY L+ L R E ++ + +
Sbjct: 262 TYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+V SYN +I+ FCK ++ ++ R+M R + N VT+NTLI G + +V
Sbjct: 322 VSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDV 381
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
K +E + G PD +T+N ++ LC E AL +M + + + +TY +
Sbjct: 382 DKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTV 441
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I+ +C G V + LF + + PDI T+ ++ C + E + M GL
Sbjct: 442 IQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGL 501
Query: 427 RPDN 430
++
Sbjct: 502 MKND 505
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 166/359 (46%)
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
R + H A L ++ P + N LL + ++ +KM G +
Sbjct: 61 LRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDL 120
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
TF+ + C ++ +L +K G +P T L+ + R + ++
Sbjct: 121 YTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + ++ +YN +ID CK ++ A + +E+ + I PN+VT+ L++G C
Sbjct: 181 MVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGR 240
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ LL +++ P+ T+++++D + + +A + EMV + P+ +TY+
Sbjct: 241 WNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSS 300
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI LC + + ++F M + PD+ ++N LI FC+ ++E K F M G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRG 360
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
L + +Y+ LI+ + G D+A++ F M+ G +PD +T N++L L G E+A
Sbjct: 361 LVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKA 419
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 35/276 (12%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
++N+VI+CFC + A + +M P+ VT +L++G C+ V L+ +
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALD------------------------------ 346
+E G++PD +N++ID LC+ R DALD
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241
Query: 347 -----CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
L +M++ + PN ITY+ L+ + G V + +F++M I PDI T+++L
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSL 301
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I C ++I++A + F M++ G PD SY+ LI K+ R ++ + F M Q G
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGL 361
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
++ T N +++ Q G ++A + G+S
Sbjct: 362 VNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVS 397
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 154/354 (43%), Gaps = 39/354 (11%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P YNA+ID+L K+ ++ A F+++ +P+ TY L++G+C G ++
Sbjct: 184 IGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWND 243
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A RL++ M PNV TY+ L+D F +V E + E M ++ P+ T SL++
Sbjct: 244 AARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLIN 303
Query: 124 GVFRCL-----DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
G+ CL + ++ F+L++ + + NTL+ + + RKM
Sbjct: 304 GL--CLHDRIDEANQMFDLMV---SKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQ 358
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
RG + + T++ + D+++ GV P TY +L+ L G +
Sbjct: 359 RGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEK 418
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ K + ++ +Y VI CK ++ A + + + + P++VT+ T++S
Sbjct: 419 ALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMS 478
Query: 299 GHCK-----------------------------DAEVHKTRELLVMLLECGFKP 323
G C D ++ + EL+ +L CG+ P
Sbjct: 479 GLCTKGLQHEVEALYTKMKQEGLMKNDSMLCLGDGDITISAELIKKMLSCGYAP 532
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 95/196 (48%)
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+D ++H L +++ P FN ++ + + +++ + +M G+ +
Sbjct: 62 RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
T+NI+I C V+ +L + KM PD T +L+ FCR N++ A M
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ +G RPD +Y+A+I +L K+ R ++A F + + G P+ T ++ L GR+
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241
Query: 482 EEAHDIVKTSKERGIS 497
+A +++ +R I+
Sbjct: 242 NDAARLLRDMIKRKIT 257
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 126/518 (24%), Positives = 243/518 (46%), Gaps = 29/518 (5%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS LYN ++ + ++ N ++L ++ M + + P+ +T+N+LI +C G +++A L
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+M G PN +T+ IL+ G+C A ++ +L M+ + PN +L+ +
Sbjct: 170 FDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCK 229
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM--GDRGYLPES 185
H A +L+ + E + N+ + L + EA+ I R M + LP
Sbjct: 230 EGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHP 289
Query: 186 STFDYTVTCL---VTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+ Y + + G+ L E ++DT + +Y + + L + G+ +E
Sbjct: 290 NVITYKLMLMGFCKEGM-LEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIV 348
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + + ++ SYN+V+D CK M+ A + M I P+ VT++TL+ G+C
Sbjct: 349 LKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCS 408
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+V + LL ++ P+ +T N ++ L + R +A + L +M E G +T+T
Sbjct: 409 KGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVT 468
Query: 363 YNILIRSLCAIGDVARSLRLFQKM-----------------------QADRISPDIYTFN 399
NI+I +LC G + +++ + M + +PD+ T++
Sbjct: 469 CNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYS 528
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
+I C+ +++ A+K F M++ GL+PD+ Y I + + G+ A Q ME+
Sbjct: 529 TIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKR 588
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
GCN T N ++ L + + E + ++ +E+G+S
Sbjct: 589 GCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVS 626
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/509 (24%), Positives = 224/509 (44%), Gaps = 29/509 (5%)
Query: 16 VIDALVKSNSIDLAYLKFQQMSVD--QCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
++ L KS + A F+ + + + +P + YN+L+ R V+ L K M
Sbjct: 81 LVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVL 140
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
+P YT+ +LI C++ + + + + M R PNE T LV G R K
Sbjct: 141 ARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASK 200
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
ELL + L ++ NTL+ +A ++ KM + G +P TF+ ++
Sbjct: 201 GLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRIS 260
Query: 194 CLVTGLDLNETCGIL-DTFIKRGV---KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
L + E I D I + P TY L++ K G E ++ + ++
Sbjct: 261 ALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRN 320
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
N+ SYN+ + + + A + +EM I P++ ++N ++ G CK+ +
Sbjct: 321 ANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDA 380
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
R L+ +++ G PD T+++++ C + +A + L EM+ PNT T N+L+ S
Sbjct: 381 RMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHS 440
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG---- 425
L G ++ + L QKM D T N +I + C +++KA + M T G
Sbjct: 441 LWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAAL 500
Query: 426 -------------------LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
PD +YS +I L K+GR D+AK+ F+ M G PDS
Sbjct: 501 GNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSA 560
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ + + ++G+ A ++K ++RG
Sbjct: 561 IYDTFIHSFCREGKISSAFQVLKDMEKRG 589
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 130/525 (24%), Positives = 223/525 (42%), Gaps = 28/525 (5%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI P+ LYN +I + K A +M D P T+N I +C G + E
Sbjct: 211 MGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILE 270
Query: 64 ALRLVKQM---EGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
A R+ + M E LG PNV TY +++ GFC + E +++ MK N +
Sbjct: 271 ASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYN 330
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+ G+ R +A+ +L + N ++ L N M S+A ++ M
Sbjct: 331 IWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRN 390
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G LP++ T+ + + + E +L I P T +L+ +L+K GR E
Sbjct: 391 GILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEA 450
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA------------ 287
+ L + + + + N++I+ C +D+A EI M A
Sbjct: 451 ENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGL 510
Query: 288 -----------PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
P+LVT++T+ISG CK + ++ + ++ G +PD +++ I C
Sbjct: 511 VDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFC 570
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
R + A L +M + G TYN LI L + + L +M+ +SPD+
Sbjct: 571 REGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVC 630
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
T+N ++ C +I A ML G+ P+ S+ LIKA K+ F + + F +
Sbjct: 631 TYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVF-EI 689
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
N C L+ L+ G+ EA ++ +T+ +R +F
Sbjct: 690 ALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNF 734
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/551 (23%), Positives = 216/551 (39%), Gaps = 99/551 (17%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ----CKPDRFTYNILIHGICRIGV 60
G+ P +N+ I AL S I A F+ M +D+ P+ TY +++ G C+ G+
Sbjct: 247 GLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGM 306
Query: 61 VDEALRLV-----------------------------------KQMEGLGYAPNVYTYTI 85
++EA LV K+M G+G P++Y+Y I
Sbjct: 307 LEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNI 366
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
++DG C +++ ++ +M + P+ T +L+HG +A LL +
Sbjct: 367 VMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNN 426
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
CN LL+ L SEA +L+KM ++GY ++ T + + L L++
Sbjct: 427 CSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAI 486
Query: 206 GIL-----------------------DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
I+ DT + P TY ++ L KAGR + +
Sbjct: 487 EIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKK 546
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ L + Y+ I FC+ + A ++ ++M R L T+N+LI G
Sbjct: 547 FIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGS 606
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ + L+ + E G PD T+N M++CLC R DA L EM++ G+ PN +
Sbjct: 607 KNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISS 666
Query: 363 YNILIRSLCAI----------------------------------GDVARSLRLFQKMQA 388
+ ILI++ C G VA + LF+
Sbjct: 667 FRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALD 726
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR--- 445
+ + LI C+ K+E A ++ G + D S+ +I K G
Sbjct: 727 RSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHV 786
Query: 446 FDEAKQTFLSM 456
DE + + M
Sbjct: 787 ADELAERMMEM 797
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 160/377 (42%), Gaps = 59/377 (15%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP+T N ++ +L K I A Q+M+ D T NI+I+ +C G +D+A+
Sbjct: 428 SPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIE 487
Query: 67 LVKQMEGLGYA-----------------------PNVYTYTILIDGFCNAKRVAEVFRVL 103
+V M G A P++ TY+ +I G C A R+ + +
Sbjct: 488 IVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKF 547
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL-VCNTLLYRLSN 162
M + + P+ A + +H R AF++L + ME+ + L N+L+ L +
Sbjct: 548 IEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVL-KDMEKRGCNKTLQTYNSLILGLGS 606
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+ E ++ +M ++G P+ T+++ + CL G +N+ +LD +++G+ P S+
Sbjct: 607 KNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISS 666
Query: 223 YLLLMEAL-----YKAGRDV---------EGDRYLNHVFKDRLVSNVNS----------- 257
+ +L++A +KA +V + +F + LV +
Sbjct: 667 FRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALD 726
Query: 258 ---------YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
Y +ID CK ++ A+++ + D+ + +F +I G K H
Sbjct: 727 RSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHV 786
Query: 309 TRELLVMLLECGFKPDK 325
EL ++E + +K
Sbjct: 787 ADELAERMMEMASESNK 803
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 230/499 (46%), Gaps = 1/499 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG S Y+ ++ L K N +A+L +++M + Y +++ +C+ G V
Sbjct: 87 LGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQA 146
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLV 122
A ++ LG+ + + T L+ C + E FRV E M + C PN T L+
Sbjct: 147 AEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILI 206
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
HG+ +AF+L +E+ L+ + M +A +L +M + +
Sbjct: 207 HGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACV 266
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T+ + L + E G+ +K G+ P T+ L+ K G V +
Sbjct: 267 PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 326
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L+ + K N+ +YN +++ C+V+ +A + R + D + P+ VT+N L+ G CK
Sbjct: 327 LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCK 386
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ +++ + + G +PD FTF ++ID LC+ R E A L MV+ G+ + +T
Sbjct: 387 EGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVT 446
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+ LI C IG LF+ M +R +TFN + + + K+ +A M+
Sbjct: 447 FTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMM 506
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
GL P +++ LI+ ++G + + M+Q GC+P+ YT +I+ L GR E
Sbjct: 507 KYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVE 566
Query: 483 EAHDIVKTSKERGISFKSF 501
EA I+ + G+S F
Sbjct: 567 EAETILFSMSSFGVSPNHF 585
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 223/504 (44%), Gaps = 38/504 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PSTR Y +I A D A +M+ C P+ TY ILI +CR G ++EA
Sbjct: 229 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 288
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++M G P + T+ LI+G+C V F++L +M++ N PN T L+ G
Sbjct: 289 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 348
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R +KAF LL R ++ L ++ N L+ + A I M G P+
Sbjct: 349 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 408
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + L L + GIL + +K+G+ T+ L++ K G+ +
Sbjct: 409 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE 468
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
++ ++R ++ +++N +D K ++ A + +M + P++VT LI GHC+
Sbjct: 469 NMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAG 528
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E + ++L + + G P+ +T+ +I+ LC R E+A L M +GV PN TY
Sbjct: 529 ETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYA 588
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+L+++ G + R+ ++ M + P+ + ++AL+ F N A +A S L
Sbjct: 589 VLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGA-RALSSTGDL 647
Query: 425 GLR-------------------------------------PDNFSYSALIKALIKSGRFD 447
R P Y+ L+ L K GR
Sbjct: 648 DARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRII 707
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLI 471
EA Q M ++G PD S++I
Sbjct: 708 EADQLTQDMVKHGLFPDKAISSII 731
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/485 (22%), Positives = 206/485 (42%), Gaps = 41/485 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P +NA+I+ K + A+ M CKP+ TYN L+ G+CR+ +A
Sbjct: 299 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 358
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++++ G P+ TY IL+DGFC ++ F + M + P+ T +L+ G
Sbjct: 359 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 418
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A +L +++ ++ L+ A + + M + L
Sbjct: 419 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTT 478
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ TF+ + L LNE +L +K G+ P T+ +L+E +AG + L
Sbjct: 479 AHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLE 538
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + NV +Y ++I+ C ++ A I M ++PN T+ L+ H K
Sbjct: 539 RMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAG 598
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMI-------------------------------- 332
+ + +++ +++ G +P+ +++++
Sbjct: 599 RLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEEND 658
Query: 333 -DCLCRAHRF-----EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
+CL +H F + AL E+ + GVP + YN L+ LC G + + +L Q M
Sbjct: 659 NNCL-SSHVFRLMDVDHALKIRDEIKKCGVPTEDL-YNFLVVGLCKEGRIIEADQLTQDM 716
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ PD +++I+ +C+ K + + +L P SY +I L GR
Sbjct: 717 VKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRV 775
Query: 447 DEAKQ 451
EA++
Sbjct: 776 QEAQK 780
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 160/420 (38%), Gaps = 74/420 (17%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN ++D K +++A+ F M+ +PD FT+ LI G+C++G +++A
Sbjct: 369 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 428
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER--------------- 109
++ M G + + T+T LIDG C + +V + E M E
Sbjct: 429 NGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDA 488
Query: 110 --------------------NVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
+ P+ T L+ G R + + ++L R +
Sbjct: 489 LGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 548
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
++ L NN EA IL M G P T+ V V L+ I+
Sbjct: 549 VYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVS 608
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN----------------------HVF 247
T +K G +P Y L+ + + G R L+ HVF
Sbjct: 609 TMVKNGCQPNSHIYSALLSGFVLSNTAI-GARALSSTGDLDARSLSSEENDNNCLSSHVF 667
Query: 248 K-----------DRL----VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
+ D + V + YN ++ CK + A ++ ++M + P+
Sbjct: 668 RLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KA 726
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+++I +CK + E + ++L+ F P ++ +I L R ++A +S++V
Sbjct: 727 ISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 786
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 105/248 (42%), Gaps = 42/248 (16%)
Query: 295 TLISGHCKDAE--VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
L+ C+D+E V K L + E GF+ +++++ CL + + A MV
Sbjct: 61 VLLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMV 120
Query: 353 EWGVPPNTITYNILIRSLCAIG-----------------------------------DVA 377
G I Y ++ +LC G D+
Sbjct: 121 NEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLG 180
Query: 378 RSLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+ R+F+KM + + P+ T++ LI C ++E+A + M+ G +P +Y+ L
Sbjct: 181 EAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVL 240
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
IKA G D+A + M C P+ +T ++++ L ++G+ EEA+ + + + G+
Sbjct: 241 IKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGL 300
Query: 497 SFKSFPGL 504
PG+
Sbjct: 301 C----PGI 304
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 227/447 (50%), Gaps = 4/447 (0%)
Query: 31 LKFQQMSVDQCK-PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDG 89
LKF + + Q PD LI G CR G +A R+++ +E G P+V TY +LI G
Sbjct: 127 LKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGG 186
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
+C + + + +VLE M +V P+ T +++ + +A E+L R M+RE
Sbjct: 187 YCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPD 243
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ L+ N+S +A +L +M +G P+ T++ + + L+E L+
Sbjct: 244 VITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLN 303
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
G +P T+ +++ ++ GR ++ +R L + + +V ++N++I+ C+
Sbjct: 304 NMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKR 363
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
++ RA ++ +M PN +++N L+ G C++ ++ + E L +++ G PD T+N
Sbjct: 364 LLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYN 423
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+++ LC+ + + A++ L+++ G P ITYN +I L +G + L ++M+
Sbjct: 424 TLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRK 483
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ PDI T++ L++ K+++A K F M L ++P +Y+A++ L K+ + A
Sbjct: 484 GLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRA 543
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLV 476
M + GC P T +++E +
Sbjct: 544 IDFLAYMVEKGCKPTKATYTILIEGIA 570
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/487 (25%), Positives = 233/487 (47%), Gaps = 9/487 (1%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDR----FTYNILIHGICRIGVVDEALRLVK 69
N + +V + + DL + + S + R F NI + + R G ++E L+ ++
Sbjct: 72 NGRLQQIVSTPNGDLNGIGMESSSPNGVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLE 131
Query: 70 QMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
+M G P+V T LI GFC + + + R++EI++ P+ T L+ G +
Sbjct: 132 RMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSG 191
Query: 130 DPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+ KA ++L ER + +V NT+L L ++ EA +L + R P+ T+
Sbjct: 192 EIDKALQVL----ERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITY 247
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ + + +LD K+G KP TY +L+ + K GR E ++LN++
Sbjct: 248 TILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPL 307
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
NV ++N+++ C A + +M + +P++VTFN LI+ C+ + +
Sbjct: 308 YGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGR 367
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
++L + + G P+ ++N ++ C+ + + A++ L MV G P+ +TYN L+
Sbjct: 368 AIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLT 427
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
+LC G ++ + ++ + SP + T+N +I ++ K E A + M GL+P
Sbjct: 428 ALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKP 487
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
D +YS L++ L G+ DEA + F ME P + T N I+ L + + A D +
Sbjct: 488 DIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFL 547
Query: 489 KTSKERG 495
E+G
Sbjct: 548 AYMVEKG 554
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 200/441 (45%), Gaps = 48/441 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN +I KS ID A ++MSV PD TYN ++ +C G + EA
Sbjct: 172 GAVPDVITYNVLIGGYCKSGEIDKALQVLERMSV---APDVVTYNTILRSLCDSGKLKEA 228
Query: 65 LRLV-KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ ++ +QM+ Y P+V TYTILI+ CN V + ++L+ M+++ P+ T L++
Sbjct: 229 MEVLDRQMQRECY-PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287
Query: 124 GVFRCLDPHKAFELLIRFMEREPL----TQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
G+ + + I+F+ PL + N +L + + +A +L M +
Sbjct: 288 GICK----EGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRK 343
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G P TF+ + L L +L+ K G P
Sbjct: 344 GCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMP--------------------- 382
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
N SYN ++ FC+ MDRA E M R P++VT+NTL++
Sbjct: 383 --------------NSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTA 428
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CKD + E+L L G P T+N++ID L + + E A + L EM G+ P+
Sbjct: 429 LCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPD 488
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
ITY+ L+R L G V ++++F M+ I P T+NA++ C+ + +A
Sbjct: 489 IITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLA 548
Query: 420 SMLTLGLRPDNFSYSALIKAL 440
M+ G +P +Y+ LI+ +
Sbjct: 549 YMVEKGCKPTKATYTILIEGI 569
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 174/372 (46%), Gaps = 10/372 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ ++P YN ++ +L S + A + +C PD TY ILI C V +
Sbjct: 203 MSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQ 262
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK----ERNVCPNEATVR 119
A++L+ +M G P+V TY +LI+G C R+ E + L M + NV + +R
Sbjct: 263 AMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILR 322
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGD 178
S+ R +D E L+ M R+ + +V N L+ L + A +L KM
Sbjct: 323 SMCS-TGRWMDA----ERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPK 377
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G +P S +++ + ++ L+ + RG P TY L+ AL K G+
Sbjct: 378 HGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADA 437
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
LN + + +YN VID KV + A E+ EMR + + P+++T++TL+
Sbjct: 438 AVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLR 497
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G + +V + ++ + KP T+N+++ LC+A + A+D L+ MVE G P
Sbjct: 498 GLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKP 557
Query: 359 NTITYNILIRSL 370
TY ILI +
Sbjct: 558 TKATYTILIEGI 569
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 63/125 (50%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G SP YN VID L K + A ++M KPD TY+ L+ G+ G
Sbjct: 445 LSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGK 504
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VDEA+++ MEGL P+ TY ++ G C A++ + L M E+ P +AT
Sbjct: 505 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTI 564
Query: 121 LVHGV 125
L+ G+
Sbjct: 565 LIEGI 569
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 90/188 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN ++ AL K D A Q+S C P TYN +I G+ ++G + A
Sbjct: 414 GCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYA 473
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+++M G P++ TY+ L+ G +V E ++ M+ ++ P+ T +++ G
Sbjct: 474 AELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLG 533
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A + L +E+ K L+ +++ +A EA +L ++ RG++ +
Sbjct: 534 LCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIADEGLAEEALELLNELCSRGFVKK 593
Query: 185 SSTFDYTV 192
SS V
Sbjct: 594 SSAEQVAV 601
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/472 (25%), Positives = 214/472 (45%), Gaps = 3/472 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSV--DQCKPDRFTYNILIHGICRIGVV 61
LGI PS YN ++D+ + +D A ++M C P TYN++I+G+ R G +
Sbjct: 225 LGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGEL 284
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
++A +LV +M + + +T+ LI G+ V + + M+ + P T ++
Sbjct: 285 EKAAQLVDRMR-MSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTI 343
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+HG+FR + A + L + N+L+ EA + + G
Sbjct: 344 IHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGL 403
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P T++ + DL E +++G +P STY +LM K
Sbjct: 404 APSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVRE 463
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + + L + +YN I + A ++ M R I+ + VT+N + G C
Sbjct: 464 FFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLC 523
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + L + ++ G +PD T+ +I C R +A D M+ G+PP+ +
Sbjct: 524 KSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAV 583
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY + I + C G++ + FQKM + + P+ T+N LI + CRM + A + F M
Sbjct: 584 TYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEM 643
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
L GL P+ ++Y+ LI K G ++EA + + M Q+G +PD T N + +
Sbjct: 644 LERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFK 695
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 208/467 (44%), Gaps = 3/467 (0%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F++M+ P N+++ + D+ + +M LG P++ TY L+D F
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243
Query: 93 AKRVAEVFRVLEIMKER--NVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQK 150
RV + ++L M+ R P++ T +++G+ R + KA +L+ R M
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDR-MRMSKKASA 302
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
N L+ +A A+ +M + G +P T++ + + ++
Sbjct: 303 FTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVE 362
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
G+ P TY L+ KAG E + + L +V +YN+++D +C++
Sbjct: 363 MRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGD 422
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
++ A +EM ++ P++ T+ L++G K + RE +L G +PD F +N+
Sbjct: 423 LEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNT 482
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
I +A M+ G+ +T+TYNI + LC G++ + L+ KM +D
Sbjct: 483 RISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDG 542
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ PD T+ LI + C ++ +A F ML GL P +Y+ I A + G A
Sbjct: 543 LQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAY 602
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
F M + G P+ T N+++ L + GR A+ ERG+S
Sbjct: 603 GWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLS 649
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 180/401 (44%), Gaps = 35/401 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ YN +I + +S +++ A +KF +M PD TYN LI+G C+ G + EA
Sbjct: 332 GIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEA 391
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L ++ G AP+V TY IL+DG+C + E R + M E+ P+ +T L++G
Sbjct: 392 LWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNG 451
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
++ N +M E +M +G P+
Sbjct: 452 S--------------------------------RKVRNLAMVRE---FFDEMLSKGLQPD 476
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ ++ + +E + + I RG+ TY + ++ L K+G +
Sbjct: 477 CFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWM 536
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D L + +Y +I C+ + A +I M + P+ VT+ I +C+
Sbjct: 537 KMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRG 596
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ +LE G +P++ T+N +I LCR R A EM+E G+ PN TY
Sbjct: 597 NLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYT 656
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+LI C G+ ++RL+ +M I PD T NAL + F
Sbjct: 657 LLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 130/501 (25%), Positives = 218/501 (43%), Gaps = 44/501 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I G P+ R+YN ++DAL+ N + + M D P+ FTYNIL+ +C+
Sbjct: 135 IGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDR 194
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD A +L +M G P+ TYT ++ C A ++ +
Sbjct: 195 VDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDD---------------------- 232
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
A EL RF P V N L+ + A +L +M D G
Sbjct: 233 -------------ARELAGRFKPSVP-----VYNALIDGMCKEGRIEVAIKLLGEMMDNG 274
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P ++ + L ++ + RG T+ L++ + G+ E
Sbjct: 275 VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEAL 334
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ +D NV +YN +I C ++ A ++C +M+ PN+ T++ LI G
Sbjct: 335 DLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGF 394
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K ++ E ++ G +P+ T+ M+D LC+ F+ A + +M G PNT
Sbjct: 395 AKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNT 454
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+T+N I+ LC G V +++L ++MQ P+I T+N L+ + RMNK E+A F
Sbjct: 455 MTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQE 514
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+ L+P+ +Y+ ++ ++G EA Q F G PDS T N ++ +QG+
Sbjct: 515 IEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGK 574
Query: 481 FEEAHDIVKTSKERGISFKSF 501
+ A +V ER S K +
Sbjct: 575 VKIAAQLV----ERVSSMKEW 591
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/487 (22%), Positives = 210/487 (43%), Gaps = 44/487 (9%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVD--QCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
Y +I+ L + +D+ QQM +D C D F +I+G R+G ++AL++ +
Sbjct: 77 YRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFI--CIINGYKRVGSAEQALKMFYR 134
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
+ G P V Y L+D + + + + MK+ + PN T
Sbjct: 135 IGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTY------------ 182
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
N LL L N A + +M ++G P++ T+
Sbjct: 183 -----------------------NILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTT 219
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
V+ L +++ + F KP Y L++ + K GR + L + +
Sbjct: 220 MVSSLCKAGKIDDARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNG 274
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+ NV SY+ +I+ C ++ A + +M R N+ TF LI G ++++
Sbjct: 275 VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEAL 334
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+L ++++ G +P+ +N++I LC E+AL +M G PN TY+ILI
Sbjct: 335 DLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGF 394
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
GD+ + + +M + P++ T+ ++ C+ + ++A M G P+
Sbjct: 395 AKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNT 454
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+++ IK L +GR + A + M+ +GC P+ T N +L+ L + ++EEA + +
Sbjct: 455 MTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQE 514
Query: 491 SKERGIS 497
+ R +
Sbjct: 515 IEARNLQ 521
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 169/365 (46%), Gaps = 1/365 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y+ +I++L S +++LA+ F QM + C + T+ LI G G + EA
Sbjct: 274 GVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA 333
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L K M G PNV Y LI G C+ + E +V + M+ PN T L+ G
Sbjct: 334 LDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDG 393
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D A E R + + ++ L NSM +A +++ KM G P
Sbjct: 394 FAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPN 453
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ TF+ + L + +L+ G P +TY L++AL++ + E
Sbjct: 454 TMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQ 513
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L N+ +YN V+ F + MM A ++ + R AP+ +T+NT+I +CK
Sbjct: 514 EIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQG 573
Query: 305 EVHKTRELLVMLLECG-FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V +L+ + + PD T+ S+I C E+A+ L + + G+ PN T+
Sbjct: 574 KVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATW 633
Query: 364 NILIR 368
N L+R
Sbjct: 634 NALVR 638
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 196/469 (41%), Gaps = 70/469 (14%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTY---------------- 48
G+ P+ YN ++ AL K++ +D A+ F +MS C PD TY
Sbjct: 174 GLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA 233
Query: 49 --------------NILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAK 94
N LI G+C+ G ++ A++L+ +M G PNV +Y+ +I+ C +
Sbjct: 234 RELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSG 293
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCN 154
V F + M R N T L+ G F ++A +L ++ + N
Sbjct: 294 NVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYN 353
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
TL++ L +N EA + +M G LP +T+ + DL + I
Sbjct: 354 TLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISH 413
Query: 215 GVKPRFSTYLLLMEALYKA-----------------------------------GRDVEG 239
G +P TY +++ L K GR
Sbjct: 414 GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWA 473
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ L + + N+ +YN ++D ++N + A + +E+ R++ PNLVT+NT++ G
Sbjct: 474 MKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYG 533
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA---LDCLSEMVEWGV 356
+ + + +L L G PD T+N+MI C+ + + A ++ +S M EW
Sbjct: 534 FSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEW-- 591
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
P+ ITY LI C ++ ++ K I P+ T+NAL++ F
Sbjct: 592 HPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 186/415 (44%), Gaps = 7/415 (1%)
Query: 82 TYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF 141
TY ++I+ + V +L+ MK + E +++G R +A ++ R
Sbjct: 76 TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135
Query: 142 MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
E + N LL L + + + M G +P T++ + L +
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195
Query: 202 NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
+ + +G P TY ++ +L KAG+ ++ R L FK +V YN +
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGK-IDDARELAGRFK----PSVPVYNAL 250
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
ID CK ++ A ++ EM D + PN+V+++ +I+ C V L + G
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310
Query: 322 KPDKFTFNSMI-DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
+ TF +I C R +E ALD M++ G PN + YN LI LC+ G + +L
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYE-ALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEAL 369
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
++ +MQ P++ T++ LI F + + A + + M++ G RP+ +Y+ ++ L
Sbjct: 370 QVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVL 429
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
K+ FD+A M GC P++ T N ++ L GR E A +++ + G
Sbjct: 430 CKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHG 484
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 120/248 (48%), Gaps = 5/248 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y ++D L K++ D A ++M+++ C P+ T+N I G+C G V+ A
Sbjct: 414 GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWA 473
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+++M+G G PN+ TY L+D + E F + + ++ RN+ PN T ++++G
Sbjct: 474 MKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYG 533
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD-RGYLP 183
R +A +L + + R + NT+++ AA ++ ++ + + P
Sbjct: 534 FSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHP 593
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ + +++ E LD I +G+ P F+T+ AL + D G
Sbjct: 594 DIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATW----NALVRCFFDSLGHMGP 649
Query: 244 NHVFKDRL 251
H+ D L
Sbjct: 650 IHILDDIL 657
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 81/169 (47%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
F+ T+ MI+ L R + L +M G+ + +I +G ++
Sbjct: 69 AFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQA 128
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
L++F ++ P + +N L+ + NK + + +M GL P+ F+Y+ L+KA
Sbjct: 129 LKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKA 188
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
L K+ R D A + F+ M GC PD+ T ++ +L + G+ ++A ++
Sbjct: 189 LCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELA 237
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 126/478 (26%), Positives = 225/478 (47%), Gaps = 6/478 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y VI+ L++ +D AY F +M P+ TYN L+HG C G EA
Sbjct: 201 GCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEA 260
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + ++M G P+V TY L+ C R E +V + M ++ P+ + +L+HG
Sbjct: 261 IGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHG 320
Query: 125 VFR---CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ H+ ++++R + + N L+ + + M EA KM +G
Sbjct: 321 YATEGYLVQMHQLLDVMVRNGTQP---DHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGL 377
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P T+ + L +++ D I G+ P + L+ L + + +
Sbjct: 378 HPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEE 437
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + N +N +++ CK M+ RA I M D+ +++T+ TLI G+C
Sbjct: 438 LAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYC 497
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
D +V + +LL ++ G KP++ T+N++I+ C+ R EDA +M GV P +
Sbjct: 498 LDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIV 557
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y+ ++ L +A + L+ M I I T+N ++Q C+ N + A + F ++
Sbjct: 558 IYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNL 617
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+ N +++ +I AL+K GR DEAK F S+ G P+ T L++++L++QG
Sbjct: 618 CLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 675
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 124/480 (25%), Positives = 226/480 (47%), Gaps = 5/480 (1%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL-VKQM 71
Y+ VI ++ +DLA+ ++ T++ L+ G+C +A+ + +++M
Sbjct: 99 YSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRM 158
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM---KERNVCPNEA-TVRSLVHGVFR 127
LG PN ++Y IL+ G C+ R + +L M R CP + + ++++G+ R
Sbjct: 159 PALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLR 218
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
KA+ L +++ + N LL+ ++ EA I RKM G P+ T
Sbjct: 219 EGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVT 278
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + L E + D+ +K+G KP S Y L+ G V+ + L+ +
Sbjct: 279 YNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMV 338
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
++ + +N++I + K M+D A +MR + + PN+VT+ T++ C+ +V
Sbjct: 339 RNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVD 398
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
L+ G P+ F ++I LC +++ A + EM+ G+ PNTI +N L+
Sbjct: 399 DAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLL 458
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G V R+ +F M + D+ T+ LI +C K+++A K M+ G++
Sbjct: 459 NHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVK 518
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P+ +Y+ +I K+GR ++A F M G NP + IL L Q R A ++
Sbjct: 519 PNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKEL 578
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/506 (22%), Positives = 218/506 (43%), Gaps = 42/506 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P + +Y ++ + + M + +PD + +NILI + G+VDEA
Sbjct: 306 GHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEA 365
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G PN+ TY ++D C +V + + + + PN R+L+HG
Sbjct: 366 MLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHG 425
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ C KA EL + + R + NTLL L M + A
Sbjct: 426 LCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAK-------------- 471
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
I D ++ V+ TY L++ G+ E + L
Sbjct: 472 ---------------------NIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLE 510
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D + N +YN +I+ +CK ++ A + R+M + + P +V ++T++ G +
Sbjct: 511 GMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTR 570
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +EL + +++CG K T+N ++ LC+ + +DAL + T+N
Sbjct: 571 RIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFN 630
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+I +L G + LF + A + P++ T+ +++S +E+ + F S+
Sbjct: 631 IMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKN 690
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G D+ +AL+ L + G +A +++N + ++ T+ ++ LV G++++
Sbjct: 691 GCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLV-FLVSSGKYDQH 749
Query: 485 HDIV-----KTSKERGI-SFKSFPGL 504
+ + T+K R + S K PGL
Sbjct: 750 INSIPEKYRPTAKSRAVFSQKKNPGL 775
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 5/212 (2%)
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD-C 347
+L T++ +I + + L ++ G+ TF+ ++ LC R DA+D
Sbjct: 95 DLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIA 154
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI----SPDIYTFNALIQ 403
L M G PN +YNIL++ LC ++L L M AD PD+ ++ +I
Sbjct: 155 LRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVIN 214
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
R +++KA F ML G+ P+ +Y+ L+ SG+ EA F M ++G P
Sbjct: 215 GLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEP 274
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
D T N ++ L + GR EA + + ++G
Sbjct: 275 DVVTYNTLMVYLCKNGRSMEARKVFDSMVKKG 306
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 5/180 (2%)
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
+ D T++ +I C RA + A L ++ G IT++ L++ LC + ++
Sbjct: 93 RADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMD 152
Query: 382 L-FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT----LGLRPDNFSYSAL 436
+ ++M A +P+ +++N L++ C N+ ++A +M+ G PD SY+ +
Sbjct: 153 IALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTV 212
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
I L++ G+ D+A F M G +P+ T N +L G+ +EA I + G+
Sbjct: 213 INGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGV 272
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 5/141 (3%)
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA-EKAFFS 420
TY+I+I G + + ++ + TF+ L++ C + A + A
Sbjct: 98 TYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRR 157
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM----EQNGCNPDSYTSNLILETLV 476
M LG P+ FSY+ L+K L R +A +M + GC PD + ++ L+
Sbjct: 158 MPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLL 217
Query: 477 QQGRFEEAHDIVKTSKERGIS 497
++G+ ++A+ + ++G+S
Sbjct: 218 REGQLDKAYCLFDEMLDQGMS 238
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 138/488 (28%), Positives = 224/488 (45%), Gaps = 10/488 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
+SPS R YN V+ L +++ A L +++M D+ P FT+ + +CR+G +A
Sbjct: 137 AVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDA 196
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L++ M G P+ Y +I VAE +L+ M + T LV G
Sbjct: 197 LALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLG 256
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A L+ R M + + + LL L A EA A+L G LPE
Sbjct: 257 LCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAML------GRLPE 310
Query: 185 SSTFDYTVT---CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+ CL G L + + +G P TY +LM L K GR R
Sbjct: 311 VNVVMLNTVIRGCLTEG-KLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVR 369
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L+ + + N+ +Y+ ++ FC+ M D A + +M + + N +N +I C
Sbjct: 370 MLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALC 429
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
KD ++ + L+ + G KPD T+N+MI LC E+A ++E GV N I
Sbjct: 430 KDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGI 489
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN LI +L G LRL +M D+ ++N LI++ C+ ++++ M
Sbjct: 490 TYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEM 549
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+T G++P+NFSY+ LI L K+G+ +A + M G PD T N ++ L + G
Sbjct: 550 VTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWT 609
Query: 482 EEAHDIVK 489
A ++++
Sbjct: 610 HAALNLLE 617
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/491 (26%), Positives = 223/491 (45%), Gaps = 4/491 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+T + AL + A + M+ C PD Y +IH + G V EA
Sbjct: 173 VPPTTFTFGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAA 232
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L+ +M +G A +V T+ L+ G C RV E R+++ M + P+ T L+ G+
Sbjct: 233 MLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGL 292
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
R +A +L R P ++ NT++ + A + MG +G P+
Sbjct: 293 CRTRQADEACAMLGRL----PEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDV 348
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + L +LD ++G P TY L+ + + G + L+
Sbjct: 349 HTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQ 408
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ N YN +I CK +D+AT + +EM+ + P++ T+NT+I C +
Sbjct: 409 MLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDL 468
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + + L+E G + T+N++I L R R+++ L SEM+ G + I+YN
Sbjct: 469 MEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNG 528
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI++LC G+V RS+ L ++M I P+ +++N LI C+ K+ A + ML G
Sbjct: 529 LIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG 588
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
L PD +Y+ LI L K G A + +PD T N+++ + ++A
Sbjct: 589 LTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAA 648
Query: 486 DIVKTSKERGI 496
++ + GI
Sbjct: 649 MLLDKAISGGI 659
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 215/469 (45%), Gaps = 31/469 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P LY VI ALV + A + +M + C D T+N L+ G+C +G V EA
Sbjct: 207 GCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREA 266
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNV------------- 111
RLV +M G P+V TY L+ G C ++ E +L + E NV
Sbjct: 267 ARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVIRGCLTE 326
Query: 112 -----------------CPNEATVRS-LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC 153
CP + S L+HG+ + A +L E+ +
Sbjct: 327 GKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTY 386
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
+TLL+ N M +A A+L +M +G+ S ++ + L L++ ++
Sbjct: 387 STLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKS 446
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
+G KP TY ++ L E + ++ ++ +V+N +YN +I +
Sbjct: 447 QGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQE 506
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
+ EM +++++N LI CK+ V ++ LL ++ G KP+ F++N +I+
Sbjct: 507 GLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLIN 566
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
LC+A + DAL+ EM+ G+ P+ +TYN LI LC +G +L L +K+ + + P
Sbjct: 567 ELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHP 626
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
DI T+N LI C++ ++ A ++ G+ P+ ++ +++ ++
Sbjct: 627 DIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVR 675
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 201/460 (43%), Gaps = 39/460 (8%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
P +YN+++ + R +AL L ++M P +T+ + C R +
Sbjct: 139 SPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALA 198
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
+L M P+ ++++H L
Sbjct: 199 LLRGMARHGCVPDAVLYQTVIHA-----------------------------------LV 223
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
+EAA +L +M G + +TF+ V L + E ++D + +G P
Sbjct: 224 AQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVV 283
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
TY L++ L + + E L + + NV N VI + RATE+ M
Sbjct: 284 TYGFLLQGLCRTRQADEACAMLGRLPE----VNVVMLNTVIRGCLTEGKLARATELYEMM 339
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+ P++ T++ L+ G CK +L + E G P+ T+++++ CR +
Sbjct: 340 GSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMW 399
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+DA L +M+ G N+ YN +I +LC G + ++ RL Q+M++ PDI T+N +
Sbjct: 400 DDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTM 459
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I C + +E+AE F +++ G+ + +Y+ LI AL+++GR+ E + M +GC
Sbjct: 460 IYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGC 519
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
D + N +++ L ++G + + +++ +GI +F
Sbjct: 520 QLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNF 559
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 109/271 (40%), Gaps = 37/271 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPD-------------------- 44
G S +++ YN +I AL K +D A Q+M CKPD
Sbjct: 413 GFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEA 472
Query: 45 ---------------RFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDG 89
TYN LIH + R G E LRL +M G +V +Y LI
Sbjct: 473 EHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKA 532
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C V +LE M + + PN + L++ + + A EL + M + LT
Sbjct: 533 LCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALEL-SKEMLNQGLTP 591
Query: 150 KLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
+V NTL+ L A +L K+ + P+ T++ ++ L++ +L
Sbjct: 592 DIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLL 651
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
D I G+ P T+ ++++ + ++EG
Sbjct: 652 DKAISGGIVPNERTWGMMVQNFVRQTVNLEG 682
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 127/495 (25%), Positives = 215/495 (43%), Gaps = 39/495 (7%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ YNAVI +L + + A M +PD +T+N LI G CR VD A
Sbjct: 150 APTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARD 209
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L +M G+A +V +Y LI+G C A R+ E + M + P+ +LV G
Sbjct: 210 LFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKG-- 263
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
L N E +LR+M + G+ P +
Sbjct: 264 ---------------------------------LCNAERGEEGLLMLRRMKELGWRPSTR 290
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ V E +L ++G+ P T ++ A K GR + R L +
Sbjct: 291 AYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELM 350
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
NV +YN ++ FC + +A + +MR + P+ VT+N LI G C D +
Sbjct: 351 KLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHI 410
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
LL ++ G D++T+N++I+ LC+ R + A + G+ PN +T+N L
Sbjct: 411 ESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSL 470
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I LC G + + +KM + +PD YT+++ I+ C+M ++ ML +
Sbjct: 471 INGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDV 530
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+P +Y+ +I L+K + +T+ M +GCNPD T + +GR EA +
Sbjct: 531 KPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAEN 590
Query: 487 IVKTSKERGISFKSF 501
++ + G++ +
Sbjct: 591 VLMEMSKNGVTVDTM 605
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 228/502 (45%), Gaps = 8/502 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P +N++I ++N +D+A F +M + D +Y LI G+C G +DEA
Sbjct: 183 GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 242
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +M+ P+++ Y L+ G CNA+R E +L MKE P+ ++V
Sbjct: 243 VELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVD- 297
Query: 125 VFRCLD--PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
FRC + +A E+L E+ + C ++ S+A +L M RG
Sbjct: 298 -FRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCK 356
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T++ V +++ +L+ GV P TY LL+ G R
Sbjct: 357 PNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRL 416
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + D L+++ +YN +I+ CK D+A + + R I PN VTFN+LI+G CK
Sbjct: 417 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 476
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + L ++ G PD +T++S I+ LC+ ++ L + EM++ V P+T+
Sbjct: 477 SGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 536
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y I+I L + R + +M + +PD+ T+ ++++C ++ +AE M
Sbjct: 537 YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMS 596
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G+ D +Y+ L+ G+ D A M P+ +T ++L LV+ E
Sbjct: 597 KNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVE 656
Query: 483 EAHDIVKTSKERGISFKSFPGL 504
+ + + I GL
Sbjct: 657 DVLPLTPAGVWKAIELTDVFGL 678
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 133/542 (24%), Positives = 225/542 (41%), Gaps = 62/542 (11%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG PSTR Y AV+D + A Q+M P T +I+ C+ G + +
Sbjct: 283 LGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSD 342
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
ALR+++ M+ G PNV+TY L+ GFCN +V + +L M+ V P+ T L+
Sbjct: 343 ALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIR 402
Query: 124 GVFRCLDPH--KAFELLIRFMEREPL-TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
G +C+D H AF LL R ME + L + N L+ L + +A ++ + RG
Sbjct: 403 G--QCIDGHIESAFRLL-RLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 459
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P + TF+ + L + L+ + G P TY +E L K EG
Sbjct: 460 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 519
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
++ + + + + +Y +VI K EM P++VT+ T + +
Sbjct: 520 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAY 579
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C + +++ +L+ + + G D +N+++D + + A+ L +M PN
Sbjct: 580 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 639
Query: 361 ITYNILIRSLCAI----------------------------------------------- 373
TY IL+R L +
Sbjct: 640 FTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILE 699
Query: 374 -----GDVARSLRLFQKMQADRIS--PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
G + L M+ D IS DIYT AL+ FC+ + A SM+ G
Sbjct: 700 GFSEDGRTEEATSLVSLMKEDSISLNEDIYT--ALVTCFCKSKRYLDAWVLVCSMIQHGF 757
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P SY L+ LI G+ D+AK+ F++ +PD +I++ L+++G + + +
Sbjct: 758 IPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISRE 817
Query: 487 IV 488
++
Sbjct: 818 MI 819
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/488 (21%), Positives = 194/488 (39%), Gaps = 17/488 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YNA++ + A +M PD TYN+LI G C G ++ A
Sbjct: 354 GCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESA 413
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL++ MEG G + YTY LI+ C R + + + ++ R + PN T SL++G
Sbjct: 414 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLING 473
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A++ L + + ++ + L + E + + +M + P
Sbjct: 474 LCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPS 533
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + L+ + + G P TY M A GR E + L
Sbjct: 534 TVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLM 593
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI------- 297
+ K+ + + +YN ++D + D A I ++M PN T+ L+
Sbjct: 594 EMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 653
Query: 298 ----------SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
+G K E+ L ++ + F P+ T++S+++ R E+A
Sbjct: 654 LVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSL 713
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
+S M E + N Y L+ C + L M P + ++ L+
Sbjct: 714 VSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLIC 773
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ +KA++ F + PD + +I LIK G D +++ + +E+ C P T
Sbjct: 774 EGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQT 833
Query: 468 SNLILETL 475
++ E L
Sbjct: 834 YAMLTEEL 841
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 85/169 (50%), Gaps = 5/169 (2%)
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVP-PNTITYNILIRSLCAIGDVARSLRLFQKM 386
F S++ L R AL + M P P TYN +IRSLC D+AR+LR M
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLM 179
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
PD YTFN+LI +CR N+++ A F M G D SY+ LI+ L ++GR
Sbjct: 180 VRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRI 239
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
DEA + F M+Q PD + +++ L R EE +++ KE G
Sbjct: 240 DEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELG 284
>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 130/498 (26%), Positives = 242/498 (48%), Gaps = 15/498 (3%)
Query: 8 PSTRLYNAVIDALVK----SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
PS + + ++ A+V+ + +I L F + ++ D T NI+I+ +CR+ +V
Sbjct: 74 PSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIE---ADTITLNIVINCLCRLKLVAF 130
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
++ M LG P V T T LI+G C VA+ + + M++ + T L++
Sbjct: 131 GFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLIN 190
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + D A L + ER +V +T++ L + + SEA + +M +G P
Sbjct: 191 GLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRP 250
Query: 184 ESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
T+ CL+ GL E +LD +K G++P +L++A K G+ ++
Sbjct: 251 NLVTY----ACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQA 306
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + +V +YN +I +C N M+ A + M R P++V F +LI G
Sbjct: 307 KSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHG 366
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CKD ++K LL + + GF PD T+ ++I C+A R A + M ++G PN
Sbjct: 367 WCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPN 426
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
T +++ LC ++ ++ L + M+ + +I ++ L+ C K+ A + F
Sbjct: 427 LQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFS 486
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
S+ GL+ + + Y+ +IK L K G D+A+ ++ME+NGC P++ T N+ ++ L+ +
Sbjct: 487 SLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKK 546
Query: 480 RFEEAHDIVKTSKERGIS 497
+ + +++G S
Sbjct: 547 EIARSIKYLTIMRDKGFS 564
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/481 (22%), Positives = 198/481 (41%), Gaps = 36/481 (7%)
Query: 22 KSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM-EGLGYAPNV 80
K +ID A FQ M+ + P + +L+ I R+ A+ LVK M LG +
Sbjct: 53 KLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADT 112
Query: 81 YTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIR 140
T I+I+ C K VA F VL M + + P T+ +L++G+ C+ + A
Sbjct: 113 ITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGL--CVQGNVA------ 164
Query: 141 FMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLD 200
+A + M Y + T+ + L D
Sbjct: 165 ---------------------------QAVGLADHMEKMWYPLDVYTYGVLINGLCKTGD 197
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
G L +R KP Y +M+ L K G E + + + N+ +Y
Sbjct: 198 TLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYAC 257
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
+I C A + EM + P+L N L+ CK+ +V + + ++ ++ G
Sbjct: 258 LIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTG 317
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
PD FT+NS+I C ++ +A+ MV G P+ + + LI C ++ +++
Sbjct: 318 EGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAM 377
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
L ++M PD+ T+ LI FC+ + A++ F +M G P+ + + ++ L
Sbjct: 378 HLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGL 437
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
K EA +ME++ + + +++L+ + G+ A ++ + +G+
Sbjct: 438 CKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINV 497
Query: 501 F 501
+
Sbjct: 498 Y 498
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 85/197 (43%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S +G P + +I ++ A F M P+ T +++ G+C+ +
Sbjct: 383 MSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENL 442
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ EA+ L K ME N+ Y+IL+DG C+A ++ + + + + + N
Sbjct: 443 LSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTI 502
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ + KA +LLI E L N + L + + L M D+G
Sbjct: 503 MIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKG 562
Query: 181 YLPESSTFDYTVTCLVT 197
+ +++T ++ + L T
Sbjct: 563 FSVDAATTEFIINYLST 579
>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
gi|223945505|gb|ACN26836.1| unknown [Zea mays]
Length = 462
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 233/464 (50%), Gaps = 12/464 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ ++P T YN V+ L + + A ++M + C P+ T+ I C+ G++D
Sbjct: 1 MPVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDR 60
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L++QM G P+V Y+ L++GF RV E ++L M R PN + +
Sbjct: 61 AVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR---PNTVCYNAALK 117
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + EL+ + ++ +TL+ L N + A +L +M GY+P
Sbjct: 118 GLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMP 177
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ +++ ++C ++ +L + + KP ++ +++ L KA R + +
Sbjct: 178 DVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELV 234
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ K N ++N++ID C+ + A E+ M P++VT+++LI+G +
Sbjct: 235 AKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQ 294
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+L + + D F++N+ + LC A R++DA + +++MV PN +T+
Sbjct: 295 GLDEMAFDLFRSM---PCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTF 351
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NILI SLC G V R++ ++++M I+PDI+T+NALI + +++ A K F S T
Sbjct: 352 NILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALK-FLS--T 408
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ PD SY++++K L ++ R+ +A++ M + C P+ T
Sbjct: 409 MPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVT 452
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 200/428 (46%), Gaps = 50/428 (11%)
Query: 77 APNVYTYTILIDGFCNAKRVAEVFRVLEIMKE--RNVC-PNEATVRSLVHGVFRCLDPHK 133
AP+ YTY ++ G C AK+ + E+M+E RN C PNE T + + +
Sbjct: 4 APDTYTYNTVLKGLCCAKQWEQA---EELMREMIRNSCHPNEVTFATQI----------R 50
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
AF N + A +L +M G P+ + V
Sbjct: 51 AF-------------------------CQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVN 85
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
++E +L+T + R P Y ++ L AGR E + + +
Sbjct: 86 GFSEHGRVDEALKLLNTMLCR---PNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPP 142
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
N +++ +I+ C+ +++ A E+ +M+ P++V++NT+IS A +LL
Sbjct: 143 NDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLL 202
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+L KPD +FN+++ CLC+A R+ DA++ +++M++ N +T+NILI SLC
Sbjct: 203 KSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQN 259
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G V ++ +F+ M R PDI T+++LI F E A F SM R D FSY
Sbjct: 260 GQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM---PCRADIFSY 316
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+A +K L + R+D+A + M C P+ T N+++ +L Q+G A D+ + +
Sbjct: 317 NATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPK 376
Query: 494 RGISFKSF 501
GI+ F
Sbjct: 377 YGITPDIF 384
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 179/361 (49%), Gaps = 19/361 (5%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+T YNA + L + + +M C P+ T++ LI+ +C+ +V+ A+ +
Sbjct: 107 PNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEV 166
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVHGVF 126
++QM+ GY P+V +Y +I F + R + ++L+ M +C P+ + +++ +
Sbjct: 167 LEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSM----LCKPDTISFNAVLKCLC 222
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + A EL+ + ++++ ++ N L+ L N +A + M +P+
Sbjct: 223 KAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIV 282
Query: 187 TFDYTVTCLVTGLD---LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-DVEGDRY 242
T+ + L+ G L+E D F + +Y ++ L A R D G+
Sbjct: 283 TY----SSLINGFSEQGLDEM--AFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELI 336
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ V +D L + V ++N++I C+ +++RA ++ +M I P++ T+N LI+G+
Sbjct: 337 ADMVTEDCLPNEV-TFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGY-- 393
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+E + + L L +PD ++NS++ LCRA R++DA ++EM+ PN +T
Sbjct: 394 -SEQGRLDDALKFLSTMPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVT 452
Query: 363 Y 363
+
Sbjct: 453 F 453
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ +N +I +L + ++ A ++QM PD FTYN LI+G G +D+AL+
Sbjct: 346 PNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKF 405
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+ M P+ +Y ++ G C A+R + +++ M +N PNE T +
Sbjct: 406 LSTMPC---EPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFK 454
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P YNA+I+ + +D A LKF +S C+PD +YN ++ G+CR +A
Sbjct: 378 GITPDIFTYNALINGYSEQGRLDDA-LKF--LSTMPCEPDTISYNSILKGLCRAERWKDA 434
Query: 65 LRLVKQMEGLGYAPNVYTY 83
+LV +M PN T+
Sbjct: 435 EKLVTEMLRKNCTPNEVTF 453
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 228/490 (46%), Gaps = 15/490 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP+ + +I K+ A + + PD + +N LIHG+ + G D+A
Sbjct: 57 GCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQA 116
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN--VCPNEATVRSLV 122
++L + ME P+++TY +I G C + + + +LE M R P+ T +L+
Sbjct: 117 VKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLI 176
Query: 123 H-GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ G+ + D +A E+L P + N++++ L EAA IL+ M
Sbjct: 177 NAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCS-- 234
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P+ TF+ + L +L+ + + P TY +L+ L + G+
Sbjct: 235 -PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFY 293
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI---------APNLVT 292
L + + + +V +Y ++D CK ++ A ++ +EM R+I P L T
Sbjct: 294 LLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFT 353
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+N ++ G KD + K L+ L+ G+ PD T+N++ID LC+A+R +A D EM
Sbjct: 354 YNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMA 413
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
G PN +T ++ LC +G V + L +M R +P++ + +LI C+ ++++
Sbjct: 414 SLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMD 473
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
A +M G+ D+F+Y LI ++I GR EA + M G PD TS +
Sbjct: 474 DACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLE 533
Query: 473 ETLVQQGRFE 482
E + FE
Sbjct: 534 EAAMSNSVFE 543
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 232/493 (47%), Gaps = 16/493 (3%)
Query: 22 KSNSIDLAYLKFQQMS-VDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNV 80
+S+ DLA F D K D +YN L+ + + G ++ K + G +PN+
Sbjct: 3 RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNL 62
Query: 81 YTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIR 140
T+ ILI G C A + L + E +V P+ L+HG+F+ +P +A +L
Sbjct: 63 VTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFEN 122
Query: 141 FMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG--YLPESSTFDYTVTC-LVT 197
NT++ L + +A +L +M RG P+ T++ + +
Sbjct: 123 MESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICK 182
Query: 198 GLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNS 257
D+ E ILD G P TY ++ AL AGR VE L + ++ +
Sbjct: 183 DGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVT 239
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
+N ++D FCK M+ RA E+ EM +I P+++T+ L++G C+ +V LL ++
Sbjct: 240 FNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIV 299
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDA---------LDCLSEMVEWGVPPNTITYNILIR 368
G+ PD + S++D LC++ E+A + L+EMV + P TYNI++
Sbjct: 300 RQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLG 359
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
L G +++++ L + A PD+ T+N LI C+ N++ +A M +LG P
Sbjct: 360 GLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFP 419
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
++ + +++ L + GR D+A + M + P+ +++ L + R ++A ++
Sbjct: 420 NDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVL 479
Query: 489 KTSKERGISFKSF 501
+ +G++ F
Sbjct: 480 DAMRGQGVALDDF 492
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 122/495 (24%), Positives = 220/495 (44%), Gaps = 15/495 (3%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN ++D LVKS ++ + C P+ T+ ILI G C+ G AL ++ ++
Sbjct: 30 YNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALD 89
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
AP+VY + LI G + ++ E M+ V P+ T +++ G+ + +
Sbjct: 90 EFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLE 149
Query: 133 KAFELLIRFMER--EPLTQKLVCNTLL-YRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
KA ELL + R + + NTL+ + + EA IL M G P+ T++
Sbjct: 150 KARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYN 209
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
+ L + E IL T P T+ L++ KAG L + ++
Sbjct: 210 SIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 266
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV--- 306
++ +V +Y ++++ C+V + A + E+ + P+++ + +L+ G CK E+
Sbjct: 267 NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEA 326
Query: 307 HK------TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
HK RE+L ++ P FT+N ++ L + A+ +S++V G P+
Sbjct: 327 HKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDV 386
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TYN LI LC V + L +M + P+ T +++ CR+ +++ A
Sbjct: 387 VTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVE 446
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M P+ Y++LI L KS R D+A +M G D + ++ +++ GR
Sbjct: 447 MSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGR 506
Query: 481 FEEAHDIVKTSKERG 495
EA + RG
Sbjct: 507 VAEAMAMYDEMVARG 521
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 149/570 (26%), Positives = 251/570 (44%), Gaps = 79/570 (13%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS + + P+ Y +IDA KS ++ A + +M+V PD TY +++G+C+ G
Sbjct: 78 ISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGK 137
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF-------------------- 100
V+EA + ++ME +G PN ++Y LID VAE F
Sbjct: 138 VEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTA 197
Query: 101 ---------------RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
+ +++ E ++ PN T +L+ G + D +K LL E+
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
+V ++++ + + +EA ++RKM R LP + F Y L+ G +
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILP--NVFVYGT--LIDGYFKADQR 313
Query: 206 GI-LDTFIK---RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
GI LD F + RG++ + L ++GR E D + L+ + +Y +
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
+D F K A I +EM ++ ++V +N LI+G K + +++ + + G
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGL 432
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
PD TFN+MI+ C+ +AL L+EM +G+ PN+IT NIL++ LCA G++ +++
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492
Query: 382 LFQKMQADRISP-----------------------------------DIYTFNALIQSFC 406
L M P D+ T+N LI +FC
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFC 552
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R+ I +A F M+ G+ D +Y+ALI S +A M G +P+
Sbjct: 553 RLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVE 612
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGI 496
T N++L L +EA +V KERG+
Sbjct: 613 TYNILLGGLSAARLIKEAAGLVNQMKERGL 642
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 225/479 (46%), Gaps = 1/479 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI +Y A++D L K+ + A FQ + + P+ TY+ LI G C++G V++
Sbjct: 187 GIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKG 246
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+++ME PNV Y+ ++DG+ + E V+ M +RN+ PN +L+ G
Sbjct: 247 ELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDG 306
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ A +L R V ++ + L + EA + + M RG LP+
Sbjct: 307 YFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPD 366
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + ++ I ++ Y +L+ L+K G+ E + +
Sbjct: 367 RVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHT 425
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L + ++N +I+ +CK + A ++ EM+ + PN +T N L+ C
Sbjct: 426 GMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAG 485
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E+ KT +LL +L GF P T +++D ++ R + L ++V GV + TYN
Sbjct: 486 EIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYN 545
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI + C +G + R+ +F+ M I DI T+NALI +C + ++KA MLT
Sbjct: 546 TLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTE 605
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ P+ +Y+ L+ L + EA M++ G P++ T ++++ + G +E
Sbjct: 606 GVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKE 664
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 228/488 (46%), Gaps = 11/488 (2%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I S +N +ID ++ I A + M + PD TYN L++G C+IG + A
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+L+ ++ + PNV TYT LID +C ++ + + + + M +++ P+ T +++G+
Sbjct: 73 KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ +A + E + + TL+ L +EA + +M RG
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI---- 188
Query: 186 STFDYTV-TCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
FD V T L+ GL N + ++ + P TY L++ K G +G+
Sbjct: 189 -GFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGE 247
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L + + + NV Y+ ++D + K +++ A ++ R+M R+I PN+ + TLI G+
Sbjct: 248 LLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGY 307
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K + +L + G + + F +S ++ L R+ R E+A + +M+ G+ P+
Sbjct: 308 FKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDR 367
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ Y ++ G + + + Q+M D+ +N LI ++ K E +E
Sbjct: 368 VNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTG 426
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M LGL PD+ +++ +I A K G A + M+ G P+S T N++++ L G
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486
Query: 481 FEEAHDIV 488
E+ D++
Sbjct: 487 IEKTMDLL 494
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 241/502 (48%), Gaps = 27/502 (5%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ +Y +ID K++ +A F++M + + F + ++ + R G ++EA
Sbjct: 293 ILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEAD 352
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L K M G P+ YT ++DGF A + ++ F + + M E++ + L++G+
Sbjct: 353 ELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL 412
Query: 126 FRCLD-PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ ++F +R + P + NT++ A +L +M G P
Sbjct: 413 FKLGKYESESFHTGMRQLGLAPDSATF--NTMINAYCKEGNLGNALKLLNEMKSYGLKPN 470
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S T + V L ++ +T +L+ + G P +T+ +++A K+ R D L+
Sbjct: 471 SITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRR---ADVILH 527
Query: 245 HVFKDRLVS-----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
D+LV ++++YN +I FC++ M+ RAT + ++M + I +++T+N LI G
Sbjct: 528 --MHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHG 585
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+C + + K + +L G P+ T+N ++ L A ++A +++M E G+ PN
Sbjct: 586 YCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPN 645
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
TY+IL+ IG++ ++L+ +M P T+N LI F + K+ +A++
Sbjct: 646 ATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQ 705
Query: 420 SMLTLGLRPDNFSYSALI-------------KALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
M G+ P++ +Y LI K+L +S + EAK+ F M + G P
Sbjct: 706 EMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQ-AEAKRLFEEMNEKGFIPCEN 764
Query: 467 TSNLILETLVQQGRFEEAHDIV 488
T I TL + G+ +A I+
Sbjct: 765 TLACISFTLAKPGKKADAQRIL 786
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 132/256 (51%)
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
R+LN + +V +N++ID +C+ + RA E+ M+ AP++VT+NTL++G
Sbjct: 3 RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK ++ ++L+ + +P+ T+ ++ID C++ EDAL EM + P+
Sbjct: 63 CKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDV 122
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TY ++ LC G V + +F++M+ + P+ +++ LI S + + +A
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGR 182
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ G+ D Y+AL+ L K+G + A+ F + + P+ T + +++ + G
Sbjct: 183 MVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGD 242
Query: 481 FEEAHDIVKTSKERGI 496
+ +++ +E+ I
Sbjct: 243 VNKGELLLQEMEEKHI 258
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 143/332 (43%), Gaps = 35/332 (10%)
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
+++ +L+ G P TY LM K G + + + L NV +Y
Sbjct: 32 EISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYT 91
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
+ID +CK ++ A + EM + + P++VT+ +++G CK +V + + + + E
Sbjct: 92 TLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEV 151
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDAL---------------------------------- 345
G P++F++ ++ID L + +A
Sbjct: 152 GVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNA 211
Query: 346 -DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
D ++E + PN +TY+ LI C +GDV + L Q+M+ I P++ +++++
Sbjct: 212 EDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDG 271
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+ + + +A M+ + P+ F Y LI K+ + A F M+ G +
Sbjct: 272 YTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEEN 331
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++ + + L + GR EEA ++ K RG+
Sbjct: 332 NFVIDSFVNNLKRSGRMEEADELFKDMMSRGL 363
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 169/420 (40%), Gaps = 35/420 (8%)
Query: 79 NVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELL 138
+V + +LIDG+C ++ +LE MK P+ T +L++G + D A
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA---- 71
Query: 139 IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTG 198
+KL+ L L P T+ +
Sbjct: 72 ----------KKLMGEISLVNLE---------------------PNVITYTTLIDAYCKS 100
Query: 199 LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY 258
L + + D + + P TY +M L K+G+ E + + +V N SY
Sbjct: 101 QCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSY 160
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
+ID K + A + M R I ++V + L+ G K + ++ +LLE
Sbjct: 161 ATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLE 220
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
P+ T++++ID C+ L EM E + PN I Y+ ++ G +
Sbjct: 221 ESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNE 280
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
++ + +KM I P+++ + LI + + ++ A F M + GL +NF + +
Sbjct: 281 AMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVN 340
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
L +SGR +EA + F M G PD +++ + G+ +A +I + E+ F
Sbjct: 341 NLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGF 400
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 111/245 (45%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P+ + AV+DA KS D+ Q+ K D TYN LI CR+G++
Sbjct: 500 MGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRR 559
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + K M G G ++ TY LI G+C + + + F V M V PN T L+
Sbjct: 560 ATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLG 619
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ +A L+ + ER + + L+ E + +M +G++P
Sbjct: 620 GLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVP 679
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ T++ ++C G +++ ++ RG+ P STY +L+ YK + E ++ L
Sbjct: 680 KTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSL 739
Query: 244 NHVFK 248
++
Sbjct: 740 KRSYQ 744
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 115/264 (43%), Gaps = 12/264 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ YN +I + I A L F+ M D TYN LIHG C + +
Sbjct: 535 MGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKK 594
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + QM G +PNV TY IL+ G A+ + E ++ MKER + PN T LV
Sbjct: 595 AFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVS 654
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + + + +L + + + + N L+ + S+A ++++M RG P
Sbjct: 655 GHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPP 714
Query: 184 ESSTFDYTVTC---LVTGLDLN---------ETCGILDTFIKRGVKPRFSTYLLLMEALY 231
SST+D + L +LN E + + ++G P +T + L
Sbjct: 715 NSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLA 774
Query: 232 KAGRDVEGDRYLNHVFKDRLVSNV 255
K G+ + R LN ++K + V +
Sbjct: 775 KPGKKADAQRILNKLYKKKTVQEL 798
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 221/488 (45%), Gaps = 38/488 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ--CKPDRFTYNILIHGICRIGVV 61
LG P Y V+ L N A + M+ ++ C PD TYN +IHG + G +
Sbjct: 73 LGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKI 132
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
+A L +M G+ P+V T+ +I+ C A+ V +L M + V PN+ T S+
Sbjct: 133 GKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSM 192
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+HG + L R+ EA + R+M RG
Sbjct: 193 IHG----------YSTLGRW-------------------------EEATKMFREMTGRGL 217
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P+ +++ + L E I + +G +P TY +L+ G +
Sbjct: 218 IPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMS 277
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ N + D +V+N + ++ID + K MMD A I EM+ + ++P++ T++TLIS C
Sbjct: 278 FFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALC 337
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP-PNT 360
+ + + ++ G +P+ ++S+I C A + + EM+ G+P PN
Sbjct: 338 RMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNI 397
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+N ++ S+C G V + +F ++ DI FN LI +C + ++ KA +
Sbjct: 398 AFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDA 457
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M++ G+ PD F+Y+ L+ KSGR D+ F M P + T N+IL+ L + GR
Sbjct: 458 MISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGR 517
Query: 481 FEEAHDIV 488
A ++
Sbjct: 518 TVAAQKML 525
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/532 (24%), Positives = 240/532 (45%), Gaps = 44/532 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P +N++I+AL K+ ++D A L +QM + P++ TY +IHG +G +EA
Sbjct: 146 GFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEA 205
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ ++M G G P++ ++ +D C R E + M + PN T L+HG
Sbjct: 206 TKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHG 265
Query: 125 VFRCLDPHKAFELLIRF---MEREPLTQK-LVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
F ++ F M+ + + LV L+ + M EA IL +M +G
Sbjct: 266 ----YATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQG 321
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T+ ++ L L + + I GV+P Y L++ G V+
Sbjct: 322 LSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAK 381
Query: 241 RYLNHVFKDRLV-SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + + + N+ +N ++ CK + A I ++D +++ FNTLI G
Sbjct: 382 ELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDG 441
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+C E+ K +L ++ G PD FT+N++++ ++ R +D L+ EM + + P
Sbjct: 442 YCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPT 501
Query: 360 TITYNILI-----------------------------------RSLCAIGDVARSLRLFQ 384
T+TYNI++ + LC ++ +FQ
Sbjct: 502 TVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQ 561
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
K+ + +I T N +I S + + E+A+ F ++ GL P+ +Y +I+ L+K G
Sbjct: 562 KLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEG 621
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+EA F SME++GC P S N + TL+++G +A + + + I
Sbjct: 622 SVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKVDGKSI 673
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/498 (22%), Positives = 215/498 (43%), Gaps = 39/498 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR- 66
P+ Y V++ ++ +L F ++ K D+ N ++ +C D+A++
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM-KERNVC-PNEATVRSLVHG 124
L+++M LG P+ ++Y I++ C+ R + +L +M KE VC P+ T +++HG
Sbjct: 66 LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ KA CN + +M +G++P+
Sbjct: 126 FFKEGKIGKA------------------CN-----------------LYHEMMQQGFVPD 150
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T + + L ++ +L + GV P TY ++ GR E +
Sbjct: 151 VVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFR 210
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L+ ++ S+N +D CK A EI M + PN+VT+ L+ G+ +
Sbjct: 211 EMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEG 270
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ G + F +ID + ++A+ LSEM G+ P+ TY+
Sbjct: 271 CFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYS 330
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI +LC +G +A ++ F +M + P+ +++LIQ FC + KA++ + M+
Sbjct: 331 TLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNN 390
Query: 425 GL-RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ RP+ +++++ ++ K GR +A F ++ G D N +++ G +
Sbjct: 391 GIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGK 450
Query: 484 AHDIVKTSKERGISFKSF 501
A ++ GI +F
Sbjct: 451 AFSVLDAMISAGIGPDTF 468
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 3/142 (2%)
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
PP TY +++ C L F ++ + D N +++ C + + A K
Sbjct: 5 PPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVK 64
Query: 417 AFFSMLT-LGLRPDNFSYSALIKALIKSGRFDEAKQTF--LSMEQNGCNPDSYTSNLILE 473
+T LG PD FSY+ ++K L R +A ++ E+ C+PD T N ++
Sbjct: 65 VLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIH 124
Query: 474 TLVQQGRFEEAHDIVKTSKERG 495
++G+ +A ++ ++G
Sbjct: 125 GFFKEGKIGKACNLYHEMMQQG 146
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 149/570 (26%), Positives = 251/570 (44%), Gaps = 79/570 (13%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS + + P+ Y +IDA KS ++ A + +M+V PD TY +++G+C+ G
Sbjct: 78 ISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGK 137
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF-------------------- 100
V+EA + ++ME +G PN ++Y LID VAE F
Sbjct: 138 VEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTA 197
Query: 101 ---------------RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
+ +++ E ++ PN T +L+ G + D +K LL E+
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
+V ++++ + + +EA ++RKM R LP + F Y L+ G +
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILP--NVFVYGT--LIDGYFKADQR 313
Query: 206 GI-LDTFIK---RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
GI LD F + RG++ + L ++GR E D + L+ + +Y +
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
+D F K A I +EM ++ ++V +N LI+G K + +++ + + G
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGL 432
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
PD TFN+MI+ C+ +AL L+EM +G+ PN+IT NIL++ LCA G++ +++
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492
Query: 382 LFQKMQADRISP-----------------------------------DIYTFNALIQSFC 406
L M P D+ T+N LI +FC
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFC 552
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R+ I +A F M+ G+ D +Y+ALI S +A M G +P+
Sbjct: 553 RLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVE 612
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGI 496
T N++L L +EA +V KERG+
Sbjct: 613 TYNILLGGLSAARLIKEAAGLVNQMKERGL 642
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 225/479 (46%), Gaps = 1/479 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI +Y A++D L K+ + A FQ + + P+ TY+ LI G C++G V++
Sbjct: 187 GIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKG 246
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+++ME PNV Y+ ++DG+ + E V+ M +RN+ PN +L+ G
Sbjct: 247 ELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDG 306
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ A +L R V ++ + L + EA + + M RG LP+
Sbjct: 307 YFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPD 366
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + ++ I ++ Y +L+ L+K G+ E + +
Sbjct: 367 RVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHT 425
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L + ++N +I+ +CK + A ++ EM+ + PN +T N L+ C
Sbjct: 426 GMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAG 485
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E+ KT +LL +L GF P T +++D ++ R + L ++V GV + TYN
Sbjct: 486 EIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYN 545
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI + C +G + R+ +F+ M I DI T+NALI +C + ++KA MLT
Sbjct: 546 TLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTE 605
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ P+ +Y+ L+ L + EA M++ G P++ T ++++ + G +E
Sbjct: 606 GVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKE 664
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 228/488 (46%), Gaps = 11/488 (2%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I S +N +ID ++ I A + M + PD TYN L++G C+IG + A
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+L+ ++ + PNV TYT LID +C ++ + + + + M +++ P+ T +++G+
Sbjct: 73 KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ +A + E + + TL+ L +EA + +M RG
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI---- 188
Query: 186 STFDYTV-TCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
FD V T L+ GL N + ++ + P TY L++ K G +G+
Sbjct: 189 -GFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGE 247
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L + + + NV Y+ ++D + K +++ A ++ R+M R+I PN+ + TLI G+
Sbjct: 248 LLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGY 307
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K + +L + G + + F +S ++ L R+ R E+A + +M+ G+ P+
Sbjct: 308 FKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDR 367
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ Y ++ G + + + Q+M D+ +N LI ++ K E +E
Sbjct: 368 VNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTG 426
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M LGL PD+ +++ +I A K G A + M+ G P+S T N++++ L G
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486
Query: 481 FEEAHDIV 488
E+ D++
Sbjct: 487 IEKTMDLL 494
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 241/502 (48%), Gaps = 27/502 (5%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ +Y +ID K++ +A F++M + + F + ++ + R G ++EA
Sbjct: 293 ILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEAD 352
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L K M G P+ YT ++DGF A + ++ F + + M E++ + L++G+
Sbjct: 353 ELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL 412
Query: 126 FRCLD-PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ ++F +R + P + NT++ A +L +M G P
Sbjct: 413 FKLGKYESESFHTGMRQLGLAPDSATF--NTMINAYCKEGNLGNALKLLNEMKSYGLKPN 470
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S T + V L ++ +T +L+ + G P +T+ +++A K+ R D L+
Sbjct: 471 SITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRR---ADVILH 527
Query: 245 HVFKDRLVS-----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
D+LV ++++YN +I FC++ M+ RAT + ++M + I +++T+N LI G
Sbjct: 528 --MHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHG 585
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+C + + K + +L G P+ T+N ++ L A ++A +++M E G+ PN
Sbjct: 586 YCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPN 645
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
TY+IL+ IG++ ++L+ +M P T+N LI F + K+ +A++
Sbjct: 646 ATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQ 705
Query: 420 SMLTLGLRPDNFSYSALI-------------KALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
M G+ P++ +Y LI K+L +S + EAK+ F M + G P
Sbjct: 706 EMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQ-AEAKRLFEEMNEKGFIPCEN 764
Query: 467 TSNLILETLVQQGRFEEAHDIV 488
T I TL + G+ +A I+
Sbjct: 765 TLACISFTLAKPGKKADAQRIL 786
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 132/256 (51%)
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
R+LN + +V +N++ID +C+ + RA E+ M+ AP++VT+NTL++G
Sbjct: 3 RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK ++ ++L+ + +P+ T+ ++ID C++ EDAL EM + P+
Sbjct: 63 CKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDV 122
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TY ++ LC G V + +F++M+ + P+ +++ LI S + + +A
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGR 182
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ G+ D Y+AL+ L K+G + A+ F + + P+ T + +++ + G
Sbjct: 183 MVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGD 242
Query: 481 FEEAHDIVKTSKERGI 496
+ +++ +E+ I
Sbjct: 243 VNKGELLLQEMEEKHI 258
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 143/332 (43%), Gaps = 35/332 (10%)
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
+++ +L+ G P TY LM K G + + + L NV +Y
Sbjct: 32 EISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYT 91
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
+ID +CK ++ A + EM + + P++VT+ +++G CK +V + + + + E
Sbjct: 92 TLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEV 151
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDAL---------------------------------- 345
G P++F++ ++ID L + +A
Sbjct: 152 GVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNA 211
Query: 346 -DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
D ++E + PN +TY+ LI C +GDV + L Q+M+ I P++ +++++
Sbjct: 212 EDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDG 271
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+ + + +A M+ + P+ F Y LI K+ + A F M+ G +
Sbjct: 272 YTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEEN 331
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++ + + L + GR EEA ++ K RG+
Sbjct: 332 NFVIDSFVNNLKRSGRMEEADELFKDMMSRGL 363
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 169/420 (40%), Gaps = 35/420 (8%)
Query: 79 NVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELL 138
+V + +LIDG+C ++ +LE MK P+ T +L++G + D A
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA---- 71
Query: 139 IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTG 198
+KL+ L L P T+ +
Sbjct: 72 ----------KKLMGEISLVNLE---------------------PNVITYTTLIDAYCKS 100
Query: 199 LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY 258
L + + D + + P TY +M L K+G+ E + + +V N SY
Sbjct: 101 QCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSY 160
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
+ID K + A + M R I ++V + L+ G K + ++ +LLE
Sbjct: 161 ATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLE 220
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
P+ T++++ID C+ L EM E + PN I Y+ ++ G +
Sbjct: 221 ESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNE 280
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
++ + +KM I P+++ + LI + + ++ A F M + GL +NF + +
Sbjct: 281 AMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVN 340
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
L +SGR +EA + F M G PD +++ + G+ +A +I + E+ F
Sbjct: 341 NLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGF 400
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 111/245 (45%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P+ + AV+DA KS D+ Q+ K D TYN LI CR+G++
Sbjct: 500 MGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRR 559
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + K M G G ++ TY LI G+C + + + F V M V PN T L+
Sbjct: 560 ATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLG 619
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ +A L+ + ER + + L+ E + +M +G++P
Sbjct: 620 GLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVP 679
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ T++ ++C G +++ ++ RG+ P STY +L+ YK + E ++ L
Sbjct: 680 KTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSL 739
Query: 244 NHVFK 248
++
Sbjct: 740 KRSYQ 744
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 114/260 (43%), Gaps = 12/260 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ YN +I + I A L F+ M D TYN LIHG C + +
Sbjct: 535 MGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKK 594
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + QM G +PNV TY IL+ G A+ + E ++ MKER + PN T LV
Sbjct: 595 AFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVS 654
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + + + +L + + + + N L+ + S+A ++++M RG P
Sbjct: 655 GHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPP 714
Query: 184 ESSTFDYTVTC---LVTGLDLN---------ETCGILDTFIKRGVKPRFSTYLLLMEALY 231
SST+D + L +LN E + + ++G P +T + L
Sbjct: 715 NSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLA 774
Query: 232 KAGRDVEGDRYLNHVFKDRL 251
K G+ + R LN ++K ++
Sbjct: 775 KPGKKADAQRILNKLYKKKV 794
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 227/492 (46%), Gaps = 7/492 (1%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCK---PDRFTYNILIHGICRIGVVDEALRLVK 69
YN ++ L + + +D +++M D P+ T N +++ C++G + A
Sbjct: 154 YNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFV 213
Query: 70 QMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
++ P+++TYT L+ G+C V V +M RN + +L+HG+
Sbjct: 214 RILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNA----VSYTNLIHGLCEAG 269
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
H+A E R E L+ L + EA ++ +M +RG P T+
Sbjct: 270 KLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYT 329
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
+ L ++E +L+ +++GV P + L+ + K G + L +
Sbjct: 330 VLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESK 389
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
++ NV +YN +I FC+ MDRA + +M + ++P++VT+NTLI G C+ V
Sbjct: 390 KVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSA 449
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
L +++ GF PD++TFN+ + CLCR R +A L + E V N Y LI
Sbjct: 450 SRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDG 509
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
C G + + LF++M A+ P+ TFN +I + K++ A M ++P
Sbjct: 510 YCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPT 569
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y+ L++ ++K FD A + + +G P+ T ++ QGR EEA ++V
Sbjct: 570 LHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVI 629
Query: 490 TSKERGISFKSF 501
K G+ SF
Sbjct: 630 KIKNEGVLLDSF 641
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 222/494 (44%), Gaps = 33/494 (6%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ R YN +I + S+D A +M + PD TYN LIHG+C +GVVD A
Sbjct: 391 VCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSAS 450
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
RL + M G++P+ +T+ + C RV E ++LE +KE++V NE +L+ G
Sbjct: 451 RLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGY 510
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ A L R + E L + N ++ L +A ++ M P
Sbjct: 511 CKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTL 570
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ V ++ D + IL+ I G +P TY ++A GR E + +
Sbjct: 571 HTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIK 630
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL-----ISGH 300
+ + ++ + YN++I+ + + ++D A + R M P+ +T++ L I H
Sbjct: 631 IKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKH 690
Query: 301 CKDA------------------------EVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
K+ + T L + ECG P+ T++ +I+ LC
Sbjct: 691 KKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLC 750
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
+ R A M E G+ P+ I +N L+ S C +G ++ L M +
Sbjct: 751 KVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLE 810
Query: 397 TFNALIQS-FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
++ LI F +MNK EKAE F S+L G D ++ LI L K+G D+ +
Sbjct: 811 SYKLLICGLFEQMNK-EKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNL 869
Query: 456 MEQNGC--NPDSYT 467
ME+NGC +P++Y+
Sbjct: 870 MEKNGCRLHPETYS 883
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 131/522 (25%), Positives = 233/522 (44%), Gaps = 37/522 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ R Y ++ AL +S A F +M C+P+ +TY +LI +C+ G +DEA
Sbjct: 285 GCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEA 344
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+++ +M G AP+V + LI +C + + VL +M+ + VCPN T L+ G
Sbjct: 345 LKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICG 404
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R +A LL + +E + + NTL++ L + A+ + R M G+ P+
Sbjct: 405 FCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPD 464
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + CL + E IL++ ++ VK Y L++ KAG+
Sbjct: 465 QWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFK 524
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + N ++N++ID K + A + +M D+ P L T+N L+ K+
Sbjct: 525 RMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEY 584
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + E+L L+ G++P+ T+ + I C R E+A + + ++ GV ++ YN
Sbjct: 585 DFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYN 644
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA------- 417
+LI + +G + + + ++M P T++ L++ IEK +K
Sbjct: 645 LLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLV----IEKHKKEGSNPVGL 700
Query: 418 --------------------------FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
F M G P+ +YS LI L K GR + A
Sbjct: 701 DVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFS 760
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ M + G +P N +L + + G F EA ++ + E
Sbjct: 761 LYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMME 802
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 7/181 (3%)
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE---WGVPPNTITYNILIRSLCAIG 374
+ FK ++N ++ CL R ++ + EM+ V PN IT N ++ S C +G
Sbjct: 144 QLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLG 203
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
++A + F ++ PD++T+ +L+ +CR + +E+A F M R + SY+
Sbjct: 204 NMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVM----PRRNAVSYT 259
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
LI L ++G+ EA + + M ++GC P T +++ L + GR EA + +ER
Sbjct: 260 NLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRER 319
Query: 495 G 495
G
Sbjct: 320 G 320
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 220/496 (44%), Gaps = 21/496 (4%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ + N V+D LVK D + + M P+ TY LI G CR G +A
Sbjct: 154 VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAF 213
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
RL +M P V YTILI G C R++E + M+ + PN T +++ G
Sbjct: 214 RLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGY 273
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ KA EL + L + L+ L A L M G +P
Sbjct: 274 CKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNI 333
Query: 186 STFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
++ CL+ G +L+E + K + P TY +L++ L R E D
Sbjct: 334 FVYN----CLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADG 389
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + K + N +YN +ID +CK M++A E+C +M ++ I PN++TF+TLI G+C
Sbjct: 390 LLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC 449
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K ++ L ++ G PD + ++ID + ++A EM E G+ PN
Sbjct: 450 KAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF 509
Query: 362 TYNILIRSLCAIGDVARSLRLF-----------QKMQADR--ISPDIYTFNALIQSFCRM 408
T + LI LC G ++ +++LF + + DR SP+ + ALIQ C
Sbjct: 510 TLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTD 569
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+I KA K F M GLRPD F+ +I+ ++ + + + G P+S
Sbjct: 570 GRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVY 629
Query: 469 NLILETLVQQGRFEEA 484
++ + + G + A
Sbjct: 630 RVLAKGYEESGYLKSA 645
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 221/487 (45%), Gaps = 56/487 (11%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
+ +LI +G+V+EAL + +M+ L P + +++DG R +++V M
Sbjct: 128 VFGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVYGDM 184
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
R PN T +L+ G R D KAF L +E++ ++ L+ L S
Sbjct: 185 VARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRI 244
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
SEA ++ R M + G LP T++ + + + + + G+ P T+ +L
Sbjct: 245 SEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGIL 304
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK------------------- 267
++ L K V ++L + +V N+ YN +ID +CK
Sbjct: 305 IDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEI 364
Query: 268 ----------------VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
V+ M+ A + +EM+ + PN VT+NTLI G+CK+ + K E
Sbjct: 365 LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIE 424
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
+ + E G +P+ TF+++ID C+A + E A+ +EMV G+ P+ + Y LI
Sbjct: 425 VCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHF 484
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML---TLGLR- 427
G+ + RL ++MQ + P+++T + LI C+ +I A K F + T G +
Sbjct: 485 KDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKT 544
Query: 428 ---------PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
P++ Y+ALI+ L GR +A + F M +G PD +T +I+ Q
Sbjct: 545 NELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVII-----Q 599
Query: 479 GRFEEAH 485
G F H
Sbjct: 600 GHFRAMH 606
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 185/414 (44%), Gaps = 8/414 (1%)
Query: 86 LIDGFCNAKR---VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFM 142
LI N++R VF VL ++ PN V + ++ E L +
Sbjct: 96 LIQCLQNSRRSRICCSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVE-----EALWVYY 150
Query: 143 EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
+ + L CN +L L + M RG P T+ + D
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
+ + D I++ + P Y +L+ L R E + + ++ N+ +YN ++
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
D +CK+ + +A E+ +EM + PN+VTF LI G CK E+ R+ L+ + G
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P+ F +N +ID C+A +AL SE+ + + P+ TY+ILI+ LC + + + L
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
Q+M+ P+ T+N LI +C+ +EKA + M G+ P+ ++S LI K
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+G+ + A + M G PD +++ + G +EA + K +E G+
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 165/390 (42%), Gaps = 13/390 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN ++D K + A +Q+M D P+ T+ ILI G+C+ + A
Sbjct: 258 GMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSA 317
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + M G PN++ Y LIDG+C A ++E + +++ + P+ T L+ G
Sbjct: 318 RKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKG 377
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A LL ++ L + NTL+ +A + +M ++G P
Sbjct: 378 LCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPN 437
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + + G+ + +G+ P Y L++ +K G E R
Sbjct: 438 IITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHK 497
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI-------------CREMRDRDIAPNLV 291
+ + L NV + + +ID CK + A ++ E+ +PN V
Sbjct: 498 EMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHV 557
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
+ LI G C D + K + + G +PD FT +I RA D + +++
Sbjct: 558 MYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADI 617
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLR 381
++ G+ PN+ Y +L + G + +LR
Sbjct: 618 LKMGIIPNSSVYRVLAKGYEESGYLKSALR 647
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 152/353 (43%), Gaps = 22/353 (6%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G+ P+ +YN +ID K+ ++ A ++ + PD FTY+ILI G+C + ++E
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEE 386
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+++M+ G+ PN TY LIDG+C + + V M E+ + PN T +L+
Sbjct: 387 ADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID 446
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + A L + + L + L+ + EA + ++M + G P
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+T++CL+ GL K G R S + L L K G D G +
Sbjct: 507 NV----FTLSCLIDGL------------CKDG---RISDAIKLF--LAKTGTDTTGSK-T 544
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + + N Y +I C + +A++ +MR + P++ T +I GH +
Sbjct: 545 NELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRA 604
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ L +L+ G P+ + + + + AL C ++ G+
Sbjct: 605 MHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGI 657
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 137/498 (27%), Positives = 221/498 (44%), Gaps = 21/498 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ + P+ + N V+D LVK D + + M P+ TY LI G CR G +
Sbjct: 152 MDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLK 211
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A RL +M P V YTILI G C R++E + M+ + PN T +++
Sbjct: 212 AFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMD 271
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + KA EL + L + L+ L A L M G +P
Sbjct: 272 GYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP 331
Query: 184 ESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
++ CL+ G +L+E + K + P TY +L++ L R E
Sbjct: 332 NIFVYN----CLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEA 387
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
D L + K + N +YN +ID +CK M++A E+C +M ++ I PN++TF+TLI G
Sbjct: 388 DGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDG 447
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+CK ++ L ++ G PD + ++ID + ++A EM E G+ PN
Sbjct: 448 YCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPN 507
Query: 360 TITYNILIRSLCAIGDVARSLRLF-----------QKMQADR--ISPDIYTFNALIQSFC 406
T + LI LC G ++ +++LF + + DR SP+ + ALIQ C
Sbjct: 508 VFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLC 567
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+I KA K F M GLRPD F+ +I+ ++ + + + G P+S
Sbjct: 568 TDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSS 627
Query: 467 TSNLILETLVQQGRFEEA 484
++ + + G + A
Sbjct: 628 VYRVLAKGYEESGYLKSA 645
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 221/486 (45%), Gaps = 56/486 (11%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
+ +LI +G+V+EAL + +M+ L P + +++DG R +++V M
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
R PN T +L+ G R D KAF L +E++ ++ L+ L S S
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
EA ++ R M + G LP T++ + + + + + G+ P T+ +L+
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILI 305
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK-------------------- 267
+ L K V ++L + +V N+ YN +ID +CK
Sbjct: 306 DGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365
Query: 268 ---------------VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
V+ M+ A + +EM+ + PN VT+NTLI G+CK+ + K E+
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+ E G +P+ TF+++ID C+A + E A+ +EMV G+ P+ + Y LI
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFK 485
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML---TLGLR-- 427
G+ + RL ++MQ + P+++T + LI C+ +I A K F + T G +
Sbjct: 486 DGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTN 545
Query: 428 --------PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
P++ Y+ALI+ L GR +A + F M +G PD +T +I+ QG
Sbjct: 546 ELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVII-----QG 600
Query: 480 RFEEAH 485
F H
Sbjct: 601 HFRAMH 606
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 179/403 (44%), Gaps = 5/403 (1%)
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
VF VL ++ PN V + ++ E L + + + L CN +L
Sbjct: 112 VFNVLSRLESSKFTPNVFGVLIIAFSEMGLVE-----EALWVYYKMDVLPAMQACNMVLD 166
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
L + M RG P T+ + D + + D I++ + P
Sbjct: 167 GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFP 226
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
Y +L+ L R E + + ++ N+ +YN ++D +CK+ + +A E+
Sbjct: 227 TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELY 286
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
EM + PN+VTF LI G CK E+ R+ L+ + G P+ F +N +ID C+A
Sbjct: 287 XEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKA 346
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+AL SE+ + + P+ TY+ILI+ LC + + + L Q+M+ P+ T+
Sbjct: 347 GNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTY 406
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
N LI +C+ +EKA + M G+ P+ ++S LI K+G+ + A + M
Sbjct: 407 NTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI 466
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
G PD +++ + G +EA + K +E G+ F
Sbjct: 467 KGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF 509
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 120/549 (21%), Positives = 217/549 (39%), Gaps = 85/549 (15%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ G+ P+ +YN +ID K+ ++ A ++ + PD FTY+ILI G+C +
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
++EA L+++M+ G+ PN TY LIDG+C + + V M E+ + PN T +
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G + A L + + L + L+ + EA + ++M + G
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P +T++CL+ GL K G R S + L L K G D G
Sbjct: 504 LHPNV----FTLSCLIDGL------------CKDG---RISDAIKLF--LAKTGTDTTGS 542
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ N + + N Y +I C + +A++ +MR + P++ T +I GH
Sbjct: 543 K-TNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGH 601
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE------- 353
+ + L +L+ G P+ + + + + AL E V+
Sbjct: 602 FRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNS 661
Query: 354 --WGV------------------------------------------PPNTITYNILIRS 369
WG PP+ + +++
Sbjct: 662 EPWGSYTIRSRFQLCVVTEKKECHSSYLTAFGIHSFVLLWYFHTILKPPSP---HEILKK 718
Query: 370 LCAIGDVA-----RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+ IG ++L+LF++MQ D PDI T + + + ++ E +
Sbjct: 719 VPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHR 778
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL D ++LI K G A++ F ++ + ++TS ++ L G+ EEA
Sbjct: 779 GLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKK--DVTTWTSMIVGHAL--HGQAEEA 834
Query: 485 HDIVKTSKE 493
+ KE
Sbjct: 835 LQLFTEMKE 843
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 112/296 (37%), Gaps = 70/296 (23%)
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKD-------AEVHK-------------TRE 311
++A ++ R+M+ D P++VT +S C D +H
Sbjct: 731 NKALQLFRQMQMDDXQPDIVTVTVALSA-CADLGALDMGEWIHAYIRHRGLDTDLCLNNS 789
Query: 312 LLVMLLECG------------FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG---- 355
L+ M +CG K D T+ SMI + E+AL +EM E
Sbjct: 790 LINMYSKCGEIGTARRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRAR 849
Query: 356 ------------VPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD-RISPDIYTFNALI 402
V PN +T+ ++ + G V + F+ M+ D + P I F ++
Sbjct: 850 KNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMV 909
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD-----------EAKQ 451
CR + +A+ +L + +RP+ + L+ A G + EA++
Sbjct: 910 DLLCRAGLL---TEAYEFILKMPVRPNAVVWRTLLGACSLQGDSNGNGNSNIKIXSEARR 966
Query: 452 TFLSMEQNGCNPDSYTSNLIL------ETLVQQGRFEEAHDIVKTSKERGISFKSF 501
L +E + + SNL + ++ + + ++ D +S E GI K F
Sbjct: 967 QLLELEPSHVGDNVIMSNLYAAKGMWDKKMLVRNQIKQRRDPGCSSIEVGIDIKEF 1022
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 149/570 (26%), Positives = 251/570 (44%), Gaps = 79/570 (13%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS + + P+ Y +IDA KS ++ A + +M+V PD TY +++G+C+ G
Sbjct: 78 ISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGK 137
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF-------------------- 100
V+EA + ++ME +G PN ++Y LID VAE F
Sbjct: 138 VEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTA 197
Query: 101 ---------------RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
+ +++ E ++ PN T +L+ G + D +K LL E+
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
+V ++++ + + +EA ++RKM R LP + F Y L+ G +
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILP--NVFVYGT--LIDGYFKADQR 313
Query: 206 GI-LDTFIK---RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
GI LD F + RG++ + L ++GR E D + L+ + +Y +
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
+D F K A I +EM ++ ++V +N LI+G K + +++ + + G
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGL 432
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
PD TFN+MI+ C+ +AL L+EM +G+ PN+IT NIL++ LCA G++ +++
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492
Query: 382 LFQKMQADRISP-----------------------------------DIYTFNALIQSFC 406
L M P D+ T+N LI +FC
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFC 552
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R+ I +A F M+ G+ D +Y+ALI S +A M G +P+
Sbjct: 553 RLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVE 612
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGI 496
T N++L L +EA +V KERG+
Sbjct: 613 TYNILLGGLSAARLIKEAAGLVNQMKERGL 642
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 225/479 (46%), Gaps = 1/479 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI +Y A++D L K+ + A FQ + + P+ TY+ LI G C++G V++
Sbjct: 187 GIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKG 246
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+++ME PNV Y+ ++DG+ + E V+ M +RN+ PN +L+ G
Sbjct: 247 ELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDG 306
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ A +L R V ++ + L + EA + + M RG LP+
Sbjct: 307 YFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPD 366
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + ++ I ++ Y +L+ L+K G+ E + +
Sbjct: 367 RVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHT 425
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L + ++N +I+ +CK + A ++ EM+ + PN +T N L+ C
Sbjct: 426 GMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAG 485
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E+ KT +LL +L GF P T +++D ++ R + L ++V GV + TYN
Sbjct: 486 EIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYN 545
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI + C +G + R+ +F+ M I DI T+NALI +C + ++KA MLT
Sbjct: 546 TLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTE 605
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ P+ +Y+ L+ L + EA M++ G P++ T ++++ + G +E
Sbjct: 606 GVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKE 664
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 228/488 (46%), Gaps = 11/488 (2%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I S +N +ID ++ I A + M + PD TYN L++G C+IG + A
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+L+ ++ + PNV TYT LID +C ++ + + + + M +++ P+ T +++G+
Sbjct: 73 KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ +A + E + + TL+ L +EA + +M RG
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI---- 188
Query: 186 STFDYTV-TCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
FD V T L+ GL N + ++ + P TY L++ K G +G+
Sbjct: 189 -GFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGE 247
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L + + + NV Y+ ++D + K +++ A ++ R+M R+I PN+ + TLI G+
Sbjct: 248 LLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGY 307
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K + +L + G + + F +S ++ L R+ R E+A + +M+ G+ P+
Sbjct: 308 FKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDR 367
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ Y ++ G + + + Q+M D+ +N LI ++ K E +E
Sbjct: 368 VNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTG 426
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M LGL PD+ +++ +I A K G A + M+ G P+S T N++++ L G
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486
Query: 481 FEEAHDIV 488
E+ D++
Sbjct: 487 IEKTMDLL 494
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 241/502 (48%), Gaps = 27/502 (5%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ +Y +ID K++ +A F++M + + F + ++ + R G ++EA
Sbjct: 293 ILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEAD 352
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L K M G P+ YT ++DGF A + ++ F + + M E++ + L++G+
Sbjct: 353 ELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL 412
Query: 126 FRCLD-PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ ++F +R + P + NT++ A +L +M G P
Sbjct: 413 FKLGKYESESFHTGMRQLGLAPDSATF--NTMINAYCKEGNLGNALKLLNEMKSYGLKPN 470
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S T + V L ++ +T +L+ + G P +T+ +++A K+ R D L+
Sbjct: 471 SITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRR---ADVILH 527
Query: 245 HVFKDRLVS-----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
D+LV ++++YN +I FC++ M+ RAT + ++M + I +++T+N LI G
Sbjct: 528 X--HDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHG 585
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+C + + K + +L G P+ T+N ++ L A ++A +++M E G+ PN
Sbjct: 586 YCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPN 645
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
TY+IL+ IG++ ++L+ +M P T+N LI F + K+ +A++
Sbjct: 646 ATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQ 705
Query: 420 SMLTLGLRPDNFSYSALI-------------KALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
M G+ P++ +Y LI K+L +S + EAK+ F M + G P
Sbjct: 706 EMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQ-AEAKRLFEEMNEKGFIPCEN 764
Query: 467 TSNLILETLVQQGRFEEAHDIV 488
T I TL + G+ +A I+
Sbjct: 765 TLACISFTLAKPGKKADAQRIL 786
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 132/256 (51%)
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
R+LN + +V +N++ID +C+ + RA E+ M+ AP++VT+NTL++G
Sbjct: 3 RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK ++ ++L+ + +P+ T+ ++ID C++ EDAL EM + P+
Sbjct: 63 CKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDV 122
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TY ++ LC G V + +F++M+ + P+ +++ LI S + + +A
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGR 182
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ G+ D Y+AL+ L K+G + A+ F + + P+ T + +++ + G
Sbjct: 183 MVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGD 242
Query: 481 FEEAHDIVKTSKERGI 496
+ +++ +E+ I
Sbjct: 243 VNKGELLLQEMEEKHI 258
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 143/332 (43%), Gaps = 35/332 (10%)
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
+++ +L+ G P TY LM K G + + + L NV +Y
Sbjct: 32 EISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYT 91
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
+ID +CK ++ A + EM + + P++VT+ +++G CK +V + + + + E
Sbjct: 92 TLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEV 151
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDAL---------------------------------- 345
G P++F++ ++ID L + +A
Sbjct: 152 GVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNA 211
Query: 346 -DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
D ++E + PN +TY+ LI C +GDV + L Q+M+ I P++ +++++
Sbjct: 212 EDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDG 271
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+ + + +A M+ + P+ F Y LI K+ + A F M+ G +
Sbjct: 272 YTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEEN 331
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++ + + L + GR EEA ++ K RG+
Sbjct: 332 NFVIDSFVNNLKRSGRMEEADELFKDMMSRGL 363
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 169/420 (40%), Gaps = 35/420 (8%)
Query: 79 NVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELL 138
+V + +LIDG+C ++ +LE MK P+ T +L++G + D A
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA---- 71
Query: 139 IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTG 198
+KL+ L L P T+ +
Sbjct: 72 ----------KKLMGEISLVNLE---------------------PNVITYTTLIDAYCKS 100
Query: 199 LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY 258
L + + D + + P TY +M L K+G+ E + + +V N SY
Sbjct: 101 QCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSY 160
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
+ID K + A + M R I ++V + L+ G K + ++ +LLE
Sbjct: 161 ATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLE 220
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
P+ T++++ID C+ L EM E + PN I Y+ ++ G +
Sbjct: 221 ESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNE 280
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
++ + +KM I P+++ + LI + + ++ A F M + GL +NF + +
Sbjct: 281 AMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVN 340
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
L +SGR +EA + F M G PD +++ + G+ +A +I + E+ F
Sbjct: 341 NLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGF 400
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 111/245 (45%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P+ + AV+DA KS D+ Q+ K D TYN LI CR+G++
Sbjct: 500 MGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRR 559
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + K M G G ++ TY LI G+C + + + F V M V PN T L+
Sbjct: 560 ATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLG 619
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ +A L+ + ER + + L+ E + +M +G++P
Sbjct: 620 GLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVP 679
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ T++ ++C G +++ ++ RG+ P STY +L+ YK + E ++ L
Sbjct: 680 KTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSL 739
Query: 244 NHVFK 248
++
Sbjct: 740 KRSYQ 744
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 115/264 (43%), Gaps = 12/264 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ YN +I + I A L F+ M D TYN LIHG C + +
Sbjct: 535 MGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKK 594
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + QM G +PNV TY IL+ G A+ + E ++ MKER + PN T LV
Sbjct: 595 AFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVS 654
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + + + +L + + + + N L+ + S+A ++++M RG P
Sbjct: 655 GHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPP 714
Query: 184 ESSTFDYTVTC---LVTGLDLN---------ETCGILDTFIKRGVKPRFSTYLLLMEALY 231
SST+D + L +LN E + + ++G P +T + L
Sbjct: 715 NSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLA 774
Query: 232 KAGRDVEGDRYLNHVFKDRLVSNV 255
K G+ + R LN ++K + V +
Sbjct: 775 KPGKKADAQRILNKLYKKKTVQEL 798
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 231/486 (47%), Gaps = 17/486 (3%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
+A+ ++ V ++ A+ M+ + + N+++ G CR G D+A+ L QM+
Sbjct: 81 SALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMK- 139
Query: 74 LGY---APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVHGVFRCL 129
Y P+ TY L++GFC AKR+AE + E MK+ C PN T L+ +
Sbjct: 140 RNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSG 199
Query: 130 DPHKAFELLIRFMEREPLTQKL-VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+ + LL MERE L + V ++L+ + +M R P T+
Sbjct: 200 EVGEGLGLL-EEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTY 258
Query: 189 DYTVTCLVTGLD----LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+CL+ GL E +L RGV+P Y +L + L K GR + + L+
Sbjct: 259 ----SCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLD 314
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +YN+V++ CK + MD A + M + P+ VT+NTL+ G C
Sbjct: 315 LMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAG 374
Query: 305 EVHKTRELLVMLLECGF--KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++H+ +L +LL F KPD FT N++I LC+ R DA S MVE G+ N +T
Sbjct: 375 KIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVT 434
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN LI A + +L+L++ SP+ T++ +I C+M + A F M
Sbjct: 435 YNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMK 494
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G+RP Y+AL+ +L + ++A+ F M N D + N+I++ ++ G +
Sbjct: 495 DSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVK 554
Query: 483 EAHDIV 488
A +++
Sbjct: 555 SAKELL 560
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 228/498 (45%), Gaps = 3/498 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD-QCKPDRFTYNILIHGICRIGVVDEA 64
+ P YN +++ K+ + A + F+ M C+P+ TY++LI C+ G V E
Sbjct: 145 VVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEG 204
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+++ME G +V+ Y+ LI FC + + + M R V PN T L+ G
Sbjct: 205 LGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQG 264
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R +A E+L R + L L N A +A +L M +G P
Sbjct: 265 LGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPG 324
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ V L +++ G+++ +K+G KP TY L++ L AG+ E
Sbjct: 325 TLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWK 384
Query: 245 HVFKDR--LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ ++ + +V + N +I CK + A I M + + N+VT+N LI G+
Sbjct: 385 LLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLA 444
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ + +L +E GF P+ T++ MI+ LC+ A +M + G+ P I
Sbjct: 445 ARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVID 504
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN L+ SLC + ++ LFQ+M+ + D+ +FN +I + ++ A++ M
Sbjct: 505 YNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMF 564
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ L PD ++S LI K G DEA + M G P + +L+ +G E
Sbjct: 565 MMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETE 624
Query: 483 EAHDIVKTSKERGISFKS 500
+ ++ ++ + S
Sbjct: 625 KIISLLHQMADKDVVLDS 642
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 194/413 (46%), Gaps = 6/413 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ +Y+++I A I+ F +M + P+ TY+ L+ G+ R G EA
Sbjct: 215 GLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREA 274
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++K M G P+V YT+L DG C R + +VL++M ++ P T +V+G
Sbjct: 275 SEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNG 334
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + AF ++ +++ + NTLL L EA + + + + +
Sbjct: 335 LCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVK 394
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
F T L+ GL +++ I + ++ G++ TY L+E A + +E
Sbjct: 395 PDVF--TCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEAL 452
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + N +Y+++I+ CK+ M+ A + +M+D I P ++ +N L++
Sbjct: 453 KLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSL 512
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C++ + + R L + D +FN +ID +A + A + LSEM + P+
Sbjct: 513 CREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDA 572
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
+T++ILI +G + ++ L++KM + P + F++L++ + + EK
Sbjct: 573 VTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEK 625
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 158/367 (43%), Gaps = 8/367 (2%)
Query: 131 PHK---AFELLIRFMEREPLT--QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
PH A L R ++ +P + + C+TL+ L ++ KM LP
Sbjct: 18 PHSLSDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRF 77
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
++ V + +L KRG L+++ ++G+ + +
Sbjct: 78 TSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQ 137
Query: 246 VFK--DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR-DRDIAPNLVTFNTLISGHCK 302
+ + D +V + +YN +++ FCK + A + M+ D PNLVT++ LI +CK
Sbjct: 138 MKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCK 197
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
EV + LL + G K D F ++S+I C E + EM+ V PN +T
Sbjct: 198 SGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVT 257
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y+ L++ L G + + + M A + PD+ + L C+ + A K M+
Sbjct: 258 YSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMV 317
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G P +Y+ ++ L K R D+A M + G PD+ T N +L+ L G+
Sbjct: 318 QKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIH 377
Query: 483 EAHDIVK 489
EA D+ K
Sbjct: 378 EAMDLWK 384
>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
Length = 649
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 239/469 (50%), Gaps = 16/469 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I+ + ++P T YN V+ L + + A +M ++C P+ T+ I C+ G+
Sbjct: 181 IASMPVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGL 240
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM--KERNVCPNEATV 118
+D A++L+ QM G P+V Y+ LI+GF V + +L M K VC N A
Sbjct: 241 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAA-- 298
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
+ G+ EL+ + + + + L+ L N++ A +L +M
Sbjct: 299 ---LKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEK 355
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P++ ++ + L +++ +L++ + KP + +++ +A R +
Sbjct: 356 YGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHD 412
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ +F+D ++N++ID C+ +++ AT++ +M P++VT+++L++
Sbjct: 413 ASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLN 472
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G + V +L + C KPD F++N+++ LCRA R+EDA + ++EMV PP
Sbjct: 473 GFSEQGLVEVAIQLF-RSMPC--KPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPP 529
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N +T+NILI SLC G V R++ + ++M +PDI+T+NALI F +++ A K
Sbjct: 530 NEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKL- 588
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ T+ +PD SY++ +K L ++ R+ +A++ M +N C P+ T
Sbjct: 589 --LSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVT 635
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 219/449 (48%), Gaps = 13/449 (2%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
++N L+ G CR G + +A R++ G A NV TYT LIDG+C + R+ + R++ M
Sbjct: 126 SHNTLVAGYCRDGRLADAERVLGAARATG-AANVVTYTALIDGYCRSGRLDDALRLIASM 184
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
V P+ T +++ G+ +A EL+ + ++ T + N +
Sbjct: 185 P---VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLL 241
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
A +L +M G P+ + + +++ +L+T + KP Y
Sbjct: 242 DRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAA 298
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ L A R + + + + N +++M+I C+ N++D A E+ +M
Sbjct: 299 LKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGC 358
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P+ V +N +I+ + V LL ++ KPD FN+++ CRA R+ DA +
Sbjct: 359 EPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASE 415
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
+++M P +T+NILI +LC G V + ++F++M R +PDI T+++L+ F
Sbjct: 416 LIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFS 475
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+E A + F SM +PD FSY+A++K L ++ R+++A + M C P+
Sbjct: 476 EQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEV 532
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERG 495
T N+++ +L Q+G + A ++++ G
Sbjct: 533 TFNILINSLCQKGLVDRAIEVLEQMPNYG 561
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 168/358 (46%), Gaps = 13/358 (3%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+T YNA + L + + +M C P+ T+++LI +C+ +VD A+ +
Sbjct: 290 PNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEV 349
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVHGVF 126
++QME G P+ Y I+I+ RV + R+L M VC P+ +++ G
Sbjct: 350 LEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSM----VCKPDALGFNAVLKGFC 405
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
R H A EL+ + + ++ N L+ L N + + A + +M P+
Sbjct: 406 RAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIV 465
Query: 187 TFDYTVTCLVTGLDLNETCGI-LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + L+ G + + F KP +Y +++ L +A R + +
Sbjct: 466 TY----SSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAE 521
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ N ++N++I+ C+ ++DRA E+ +M + P++ T+N LI+G +
Sbjct: 522 MVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGR 581
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ +LL + KPD ++NS + LCRA R++DA + ++EM+ PN +T+
Sbjct: 582 LDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 636
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 32/148 (21%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YNAV+ L ++ + A +M C P+ T+NILI+ +C+ G+VD A+ +
Sbjct: 494 PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEV 553
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK-------------------- 107
++QM G P+++TY LI+GF R+ + ++L M
Sbjct: 554 LEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCKPDAISYNSTLKGLCRAER 613
Query: 108 -----------ERNVC-PNEATVRSLVH 123
RN C PNE T + H
Sbjct: 614 WQDAEELVAEMLRNKCTPNEVTFKYANH 641
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 217/467 (46%), Gaps = 4/467 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+T + AL + + A + M+ C PD Y +IH +C G V EA
Sbjct: 171 VPPTTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 230
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L+ +M +G A +V T+ ++ G C RV E R+++ M + P T L+ G+
Sbjct: 231 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 290
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
R +A +L R P ++ NT++ +EA + MG +G P++
Sbjct: 291 CRVRQADEARAMLGRV----PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 346
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + L ++ +L K+G P TY +++ + K G + L
Sbjct: 347 HTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEE 406
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ L N YN +I CK MD A + +EMR + P++ ++NT+I C + +
Sbjct: 407 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 466
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + + LLE G + T+N++I L R R++DA+ EM+ G + ++YN
Sbjct: 467 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNG 526
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI+++C G+V RSL L ++M I P+ ++N LI C+ ++ A + ML G
Sbjct: 527 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 586
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
L PD +Y+ LI L K G A + +PD T N+++
Sbjct: 587 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 223/489 (45%), Gaps = 11/489 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKPDRFTYNILIHGICRIGVVDE 63
G+ PS R YN V+ L +++ A +++M D+ P FT+ + +CR+G +E
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANE 193
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L++ M G P+ Y +I C+ V E +L M + T +V
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ +A L+ R M + + + LL L A EA A+L G +P
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML------GRVP 307
Query: 184 ESSTFDYTVT---CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
E + + CL G L E + +T +G +P TY +LM L K GR
Sbjct: 308 ELNVVLFNTVIGGCLAEG-KLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAV 366
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
R L + K NV +Y +V+ FCK M D + EM + + N +N +I
Sbjct: 367 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 426
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CKD + + L+ + G PD ++N++I LC + E+A ++E GV N
Sbjct: 427 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 486
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITYN +I +L G ++RL ++M S D+ ++N LI++ C+ ++++
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G++P+N SY+ LI L K R +A + M G PD T N ++ L + G
Sbjct: 547 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW 606
Query: 481 FEEAHDIVK 489
A ++++
Sbjct: 607 MHAALNLLE 615
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 201/442 (45%), Gaps = 33/442 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P LY VI AL + A +M + C D T++ ++ G+C +G V EA
Sbjct: 205 GCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREA 264
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAK------------------------------ 94
RLV +M G P V TY L+ G C +
Sbjct: 265 ARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAE 324
Query: 95 -RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC 153
++AE + E M + P+ T L+HG+ + A LL R ME++ +V
Sbjct: 325 GKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLL-REMEKKGFAPNVVT 383
Query: 154 NTL-LYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
T+ L+ N M + A+L +M +G S ++ + L ++E G++
Sbjct: 384 YTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMR 443
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+G P +Y ++ L + E + ++ ++ +V+N +YN +I +
Sbjct: 444 SQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQ 503
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + +EM + ++V++N LI CKD V ++ LL + E G KP+ ++N +I
Sbjct: 504 DAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILI 563
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
LC+ R DAL+ +M+ G+ P+ +TYN LI LC +G + +L L +K+ + +
Sbjct: 564 SELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVH 623
Query: 393 PDIYTFNALIQSFCRMNKIEKA 414
PDI T+N LI C++ ++ A
Sbjct: 624 PDIITYNILISWHCKVRLLDDA 645
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 135/300 (45%), Gaps = 14/300 (4%)
Query: 207 ILDTFIKR-GVKPRFSTYLLLMEALYKAGRDVEGDR---YLNHVFKDRLVSNVNSYNMVI 262
+LD +R GV+P F +Y +++ L +A D D Y V +DR+ ++ +
Sbjct: 125 LLDQLPRRFGVQPSFRSYNVVLSVLARA--DCHADALALYRRMVHRDRVPPTTFTFGVAA 182
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
C++ + A + R M P+ V + T+I C V + LL +L G
Sbjct: 183 RALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCA 242
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI--GDVARSL 380
D TF+ ++ +C R +A + M+ G P +TY L++ LC + D AR+
Sbjct: 243 ADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA- 301
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
M ++ FN +I K+ +A + + +M G +PD +YS L+ L
Sbjct: 302 -----MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
K GR A + ME+ G P+ T ++L + + G +++ +++ +G++ S
Sbjct: 357 CKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 7/182 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ + YN +I AL++ A ++M + C D +YN LI +C+ G VD +
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 540
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+++M G PN +Y ILI C +RV + + + M + + P+ T +L++G
Sbjct: 541 LVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLING 600
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK-------MG 177
+ + H A LL + + N L+ + +AA +L + +G
Sbjct: 601 LCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVG 660
Query: 178 DR 179
DR
Sbjct: 661 DR 662
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 131/317 (41%), Gaps = 42/317 (13%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G++ +++ YN +I AL K +D A Q+M C PD +YN +I+ +C
Sbjct: 407 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 466
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
++EA + + + G N TY +I R + R+ + M
Sbjct: 467 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM-------------- 512
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++HG LD ++ + N L+ + + + +L +M ++G
Sbjct: 513 ILHGC--SLD-------VVSY------------NGLIKAMCKDGNVDRSLVLLEEMAEKG 551
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P + +++ ++ L + + + + +G+ P TY L+ L K G
Sbjct: 552 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 611
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD-------RATEICREMRDRDIAPNLVTF 293
L + + + ++ +YN++I CKV ++D RA + DR I L
Sbjct: 612 NLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPDK 671
Query: 294 NTLISGHCKDAEVHKTR 310
N + H KD+ ++ +R
Sbjct: 672 NFKLYLHTKDSYLYCSR 688
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 228/496 (45%), Gaps = 13/496 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P R + V++ L++ +A F ++ +PD + Y ++ +C + A
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRA 234
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +ME G +V TY + I G C +RV E + ++ + + + T +LV G
Sbjct: 235 REVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLG 294
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + E++ +E + + + L+ L A ++ K+ G P
Sbjct: 295 LCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPS 354
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + + L+E + + +G+ P TY +L+++ K G+ +L
Sbjct: 355 LFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLG 414
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + + V Y+ +I CK+ + A + EM + PN+V + +LISG+CK+
Sbjct: 415 KMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEG 474
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E+H L + G P+ +TF ++I LC A+R +A EMVEW V PN +TYN
Sbjct: 475 ELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYN 534
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT- 423
+LI C G+ R+ L +M + PD YT+ LI C ++ +A + F + L
Sbjct: 535 VLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEA-REFMNDLQG 593
Query: 424 --------LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G P+ +Y+ALI L K G D+A+ M + P+ T L+ L
Sbjct: 594 EQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYL 653
Query: 476 VQQGRFEEA---HDIV 488
+G E+A HD++
Sbjct: 654 TSEGNIEKAIQLHDVL 669
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 139/570 (24%), Positives = 233/570 (40%), Gaps = 79/570 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P +Y AV+ +L + A +M C TYN+ I G+C+ V EA
Sbjct: 210 GLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEA 269
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + + G +V TY L+ G C + ++ M E P+EA V +LV G
Sbjct: 270 VEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDG 329
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + AF+L+ + + V N L+ + + EA ++ MG +G P
Sbjct: 330 LRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPN 389
Query: 185 SSTFD-------------------------------YTVTCLVTGL----DLNETCGILD 209
T+ Y + L++G L + D
Sbjct: 390 DVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFD 449
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
I G+KP Y L+ K G R + + + N ++ +I C N
Sbjct: 450 EMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHAN 509
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
M A ++ EM + ++ PN VT+N LI GHCK+ + ELL ++E G PD +T+
Sbjct: 510 RMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYR 569
Query: 330 SMIDCLCRAHRFEDALDCLSEM---------VEWGVPPNTITYNILIRSLCAIGDVARSL 380
+I LC R +A + ++++ +E G PN +TY LI LC IG + ++
Sbjct: 570 PLISGLCSTGRVSEAREFMNDLQGEQQKLNEIE-GCLPNVVTYTALINGLCKIGLMDKAE 628
Query: 381 RLFQKMQADRISPD----------------------------------IYTFNALIQSFC 406
L ++M A P+ T+N LI+ FC
Sbjct: 629 LLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFC 688
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
++ +I++A + +M+ G+ PD SYS +I + G EA + + SM G NPD+
Sbjct: 689 KLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTV 748
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGI 496
N ++ G +A ++ RG+
Sbjct: 749 AYNFLIYGCCVTGELTKAFELRDDMMRRGV 778
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 200/457 (43%), Gaps = 42/457 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G++PS +YNA+I+++ K +D A F M P+ TY+ILI C+ G +D
Sbjct: 349 FGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDV 408
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL + +M +G VY Y+ LI G C ++ + + M + PN SL+
Sbjct: 409 ALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLIS 468
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + + H AF L + L+ L + + +EA + +M + +P
Sbjct: 469 GYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIP 528
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + + +LD +++G+ P TY L+ L GR E ++
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588
Query: 244 NHVFKDR--------LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN------ 289
N + ++ + NV +Y +I+ CK+ +MD+A +CREM + PN
Sbjct: 589 NDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYAC 648
Query: 290 ----------------------------LVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
VT+N LI G CK + + E+LV +++ G
Sbjct: 649 FLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGI 708
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
PD +++++I CR ++A+ M+ GV P+T+ YN LI C G++ ++
Sbjct: 709 SPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFE 768
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
L M + P+ T+N+LI C M+ + F
Sbjct: 769 LRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYF 805
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 186/396 (46%), Gaps = 23/396 (5%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI + Y+++I K + A F +M + KP+ Y LI G C+ G +
Sbjct: 419 VGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHN 478
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A RL +M G G +PN YT+T LI G C+A R+AE ++ M E NV PNE T L+
Sbjct: 479 AFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIE 538
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDR--- 179
G + + +AFELL +E+ + L+ L + SEA + + G++
Sbjct: 539 GHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKL 598
Query: 180 ----GYLPESSTFDYTVTCLVTGLDLNETCGILDT-------FIKRGVKPRFSTYLLLME 228
G LP T+ T L+ GL G++D + P +TY ++
Sbjct: 599 NEIEGCLPNVVTY----TALINGLC---KIGLMDKAELLCREMLASNSLPNQNTYACFLD 651
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
L G ++E L+ V + ++N +YN++I FCK+ + A E+ M D I+P
Sbjct: 652 YLTSEG-NIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISP 710
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+ ++++T+I +C+ ++ + +L +L G PD +N +I C A +
Sbjct: 711 DCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELR 770
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
+M+ GV PN TYN LI C + V+ + F
Sbjct: 771 DDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFS 806
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 187/414 (45%)
Query: 83 YTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFM 142
+ +LI + +R + V+ +M + + P T+ +++G+ R A L +
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIV 207
Query: 143 EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
V ++ L A ++ +M G +T++ + L +
Sbjct: 208 SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVW 267
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
E I + +G++ TY L+ L K G+ +N + + V + + + ++
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLV 327
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
D K + A ++ +++ +AP+L +N LI+ CKD ++ + L + G
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLF 387
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P+ T++ +ID C+ + + AL L +M E G+ Y+ LI C +G + + L
Sbjct: 388 PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSL 447
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
F +M A+ + P++ + +LI +C+ ++ A + + M G+ P+ ++++ALI L
Sbjct: 448 FDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCH 507
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ R EA + F M + P+ T N+++E ++G A +++ E+G+
Sbjct: 508 ANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 162/372 (43%)
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
+P FE + + + L + L+ N + ++R M D G LP+ T
Sbjct: 125 NPEGLFESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLS 184
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
+ L+ + D + G++P Y ++ +L + + + +
Sbjct: 185 GVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESS 244
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
+V +YN+ I CK + A EI + + + ++ T+ TL+ G CK E
Sbjct: 245 GCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAG 304
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
E++ ++E GF P + ++++D L + A D ++++ ++GV P+ YN LI S
Sbjct: 305 EEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINS 364
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
+C G + + LF M + P+ T++ LI SFC+ K++ A M +G++
Sbjct: 365 MCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKAT 424
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+ YS+LI K G+ AK F M NG P+ ++ ++G A +
Sbjct: 425 VYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYH 484
Query: 490 TSKERGISFKSF 501
+GIS ++
Sbjct: 485 EMTGKGISPNTY 496
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 127/499 (25%), Positives = 234/499 (46%), Gaps = 14/499 (2%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL------- 65
+N +I + + + F +++ +PD T+N L+HG+C + EAL
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 66 ---RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
L QM +G P V T+ LI+G C RV E ++ M + + + T ++V
Sbjct: 204 ETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 263
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G+ + D A LL + E ++ + ++ RL + S+A + +M ++G
Sbjct: 264 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 323
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T++ + + ++ +L I+R + P T+ L+ A K G+ E ++
Sbjct: 324 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 383
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + + + +YN +I FCK N D A + M D +P++VTFNT+I +C+
Sbjct: 384 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCR 439
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
V + +LL + G + T+N++I C A D EM+ GV P+TIT
Sbjct: 440 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 499
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
NIL+ C + +L LF+ +Q +I D +N +I C+ +K+++A F S+
Sbjct: 500 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 559
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G+ PD +Y+ +I +A F M+ NG PD+ T N ++ ++ G +
Sbjct: 560 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 619
Query: 483 EAHDIVKTSKERGISFKSF 501
++ +++ + G S +F
Sbjct: 620 KSIELISEMRSNGFSGDAF 638
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 225/493 (45%), Gaps = 19/493 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLA-----YLK-----FQQMSVDQCKPDRFTYNILIH 53
LG P +N ++ L + I A Y+ F QM P T+N LI+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLIN 229
Query: 54 GICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCP 113
G+C G V EA LV +M G G +V TY +++G C +L M+E ++ P
Sbjct: 230 GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 289
Query: 114 NEATVRSLVHGVFRCLDPHK--AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAA 171
+ +++ + C D H A L +E+ N ++ + S+A
Sbjct: 290 DVVIYSAIIDRL--CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 347
Query: 172 ILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY 231
+LR M +R P+ TF+ ++ V L E + D + R + P TY ++
Sbjct: 348 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 407
Query: 232 KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
K R + H+F +V ++N +ID +C+ +D ++ RE+ R + N
Sbjct: 408 KHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 463
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
T+NTLI G C+ ++ ++L ++ G PD T N ++ C + E+AL+ +
Sbjct: 464 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 523
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
+ +T+ YNI+I +C V + LF + + PD+ T+N +I FC + I
Sbjct: 524 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAI 583
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
A F M G PDN +Y+ LI+ +K+G D++ + M NG + D++T ++
Sbjct: 584 SDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 643
Query: 472 LETLVQQGRFEEA 484
+ L+ GR +++
Sbjct: 644 AD-LITDGRLDKS 655
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 178/392 (45%), Gaps = 17/392 (4%)
Query: 115 EATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILR 174
E ++S H F+ LD A + + P + CN ++ + A ++ R
Sbjct: 74 ELKLKSGSH-YFKSLD--DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYR 130
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM------- 227
KM R +F+ + C L+ + K G +P T+ L+
Sbjct: 131 KMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED 190
Query: 228 ---EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
EAL G VE + + + L V ++N +I+ C + A + +M +
Sbjct: 191 RISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK 250
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
+ ++VT+ T+++G CK + LL + E KPD ++++ID LC+ DA
Sbjct: 251 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 310
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
SEM+E G+ PN TYN +I C+ G + + RL + M I+PD+ TFNALI +
Sbjct: 311 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 370
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+ K+ +AEK ML + PD +Y+++I K RFD+AK F M +PD
Sbjct: 371 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPD 426
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
T N I++ + R +E +++ RG+
Sbjct: 427 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 458
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 124/266 (46%), Gaps = 10/266 (3%)
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ +++ + R N VI F ++N D A + R+M R I N+ +FN LI C
Sbjct: 93 FFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFC 152
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL----------DCLSEM 351
++ + L + GF+PD TFN+++ LC R +AL +M
Sbjct: 153 DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQM 212
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
VE G+ P IT+N LI LC G V + L KM + D+ T+ ++ C+M
Sbjct: 213 VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDT 272
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
+ A M ++PD YSA+I L K G +A+ F M + G P+ +T N +
Sbjct: 273 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM 332
Query: 472 LETLVQQGRFEEAHDIVKTSKERGIS 497
++ GR+ +A +++ ER I+
Sbjct: 333 IDGFCSFGRWSDAQRLLRDMIEREIN 358
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 35/173 (20%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNIL--------- 51
IS G+ +T YN +I + ++++ A FQ+M PD T NIL
Sbjct: 453 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 512
Query: 52 --------------------------IHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTI 85
IHG+C+ VDEA L + G P+V TY +
Sbjct: 513 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 572
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELL 138
+I GFC +++ + MK+ P+ +T +L+ G + + K+ EL+
Sbjct: 573 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 625
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 225/488 (46%), Gaps = 29/488 (5%)
Query: 12 LYNAVIDALV---KSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
L A I+A+ + + A F++M C P ++N +++ + G ++A ++
Sbjct: 75 LEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVY 134
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
+M G +VYTYTI I FC R R+L M E N ++V G++
Sbjct: 135 MRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDS 194
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+ A EL + R + N L++ L + E+ +L K+ RG P TF
Sbjct: 195 GEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTF 254
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ V L G LD ++ R VE + YL +
Sbjct: 255 NIFVQGLCRE-------GALDRAVRN-------------------SRVVEAEEYLRKMVN 288
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+ +YN +ID +CK M+ A + ++ + P+ T+ +LI+G CKD + +
Sbjct: 289 GGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDR 348
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+ L G +P +N++I L + AL ++EM E G PN TYN++I
Sbjct: 349 AMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVIN 408
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
LC +G V+ + L A PDI+T+N LI +C+ K++ A + M + G+ P
Sbjct: 409 GLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTP 468
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
D +Y+ L+ L K+G+ +E + F +ME+ GC P+ T N+I+++L + + EA D++
Sbjct: 469 DVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLL 528
Query: 489 KTSKERGI 496
K +G+
Sbjct: 529 GEMKSKGL 536
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 127/539 (23%), Positives = 245/539 (45%), Gaps = 45/539 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F PS +NA+++ LV+ + A+ + +M + D +TY I I C+
Sbjct: 102 MDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTAR 161
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
ALRL++ M LG N Y ++ G ++ + + M R +CP+
Sbjct: 162 PYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNK 221
Query: 121 LVHGVFRCLDPHKAFELLIRFMER---------EPLTQKLVCNTLLYRLSNNSMASEAAA 171
LVH + + ++ LL + ++R Q L L R NS EA
Sbjct: 222 LVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEE 281
Query: 172 ILRKMGDRGYLPESSTF-------------------------------DYTVTCLVTGL- 199
LRKM + G+ P+ T+ ++T L+ G
Sbjct: 282 YLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFC 341
Query: 200 ---DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVN 256
D + + + +G++P Y L++ L + G + + +N + ++ + N+
Sbjct: 342 KDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIW 401
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+YN+VI+ CK+ + A+ + + + P++ T+NTLI G+CK ++ E++ +
Sbjct: 402 TYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRM 461
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
G PD T+N++++ LC+A + E+ ++ M E G PN ITYNI++ SLC V
Sbjct: 462 WSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKV 521
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM-LTLGLRPDNFSYSA 435
++ L +M++ + PD+ +F L FC++ I+ A + F M + +Y+
Sbjct: 522 NEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNI 581
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
++ A + + A + F M+ +GC+PD+YT ++++ + G + + + + E+
Sbjct: 582 IVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEK 640
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 216/464 (46%), Gaps = 45/464 (9%)
Query: 43 PDRFTYNILIHGICRIGVVDEALR---------LVKQMEGLGYAPNVYTYTILIDGFCNA 93
P+ FT+NI + G+CR G +D A+R +++M G+ P+ TY +IDG+C
Sbjct: 249 PNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKK 308
Query: 94 KRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC 153
V + RVL+ + P+E T SL++G + DP +A + + + ++
Sbjct: 309 GMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLY 368
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
NTL+ LS + A ++ +M + G LP T++ + L +++ ++D I
Sbjct: 369 NTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIA 428
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
+G P ++ +YN +ID +CK +D
Sbjct: 429 KGCPP-----------------------------------DIFTYNTLIDGYCKQLKLDS 453
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
ATE+ M + + P+++T+NTL++G CK + + E+ + E G P+ T+N ++D
Sbjct: 454 ATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVD 513
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD-RIS 392
LC+A + +A+D L EM G+ P+ +++ L C IGD+ + +LF++M+ +
Sbjct: 514 SLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVC 573
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
T+N ++ +F + A K F M G PDN++Y +I K G + +
Sbjct: 574 HTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKF 633
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
L + P T +L L + + EA I+ ++GI
Sbjct: 634 LLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGI 677
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 165/361 (45%), Gaps = 3/361 (0%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G P Y ++I+ K D A F+ +P YN LI G+ + G++
Sbjct: 323 FKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLIL 382
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
AL+L+ +M G PN++TY ++I+G C V++ +++ + P+ T +L+
Sbjct: 383 PALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLI 442
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G + L A E++ R + + NTLL L + E I + M ++G
Sbjct: 443 DGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCT 502
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T++ V L +NE +L +G+KP ++ L K G D++G
Sbjct: 503 PNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIG-DIDGAYQ 561
Query: 243 LNHVFKDR--LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L + + + +YN+++ F + M+ A ++ M++ P+ T+ +I G
Sbjct: 562 LFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGF 621
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK + + + L+ +E F P TF +++CLC + +A+ + M++ G+ P T
Sbjct: 622 CKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPET 681
Query: 361 I 361
+
Sbjct: 682 V 682
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 85/215 (39%), Gaps = 36/215 (16%)
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE------------------------ 353
E GFK T+ ++ L FE+ LSEM E
Sbjct: 33 EDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIEAMKNYGRKGKV 92
Query: 354 ------------WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+ P+ ++N ++ L G ++ +++ +M+ + D+YT+
Sbjct: 93 QEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIR 152
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I+SFC+ + A + +M LG + +Y ++ L SG D A++ F M
Sbjct: 153 IKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCL 212
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
PD N ++ L ++G E+ ++ +RG+
Sbjct: 213 CPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGV 247
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 214/467 (45%), Gaps = 36/467 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P + +N ++ +V S+S + + F + + + D +++ I+I G C G ++++
Sbjct: 124 GFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKI-KVVLDVYSFGIVIKGCCEAGEIEKS 182
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ ++ G++PNV YT LIDG C + + + M + + NE T L+HG
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F+ N + + + KM + G P
Sbjct: 243 LFK-----------------------------------NGIKKQGFEMYEKMQEHGVFPN 267
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L + + D +RGV TY L+ L + + E + ++
Sbjct: 268 LHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMD 327
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D + N+ +YN +ID FC V + +A +CR+++ R ++P+LVT+N L+SG CK
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKG 387
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +++ + E G KP K T+ +ID R+ E A+ S M E G+ P+ TY+
Sbjct: 388 DTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYS 447
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI C G + + RLF+ M + P+ +N ++ +C+ +A + F M
Sbjct: 448 VLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEK 507
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
L P+ SY +I+ L K + EA+ M +G P NLI
Sbjct: 508 ELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLI 554
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 214/488 (43%), Gaps = 36/488 (7%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
+RLY +I+A V+S S+D + F +M P +N L+ + ++
Sbjct: 94 SRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFN 153
Query: 70 QMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
+ + + +VY++ I+I G C A + + F +L ++E PN +L+ G +
Sbjct: 154 ESK-IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKG 212
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
+ KA +L + + + L++ L N + + + KM + G
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHG--------- 263
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
V P TY +M L K GR + + + + +
Sbjct: 264 --------------------------VFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRER 297
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
+ N+ +YN +I C+ + A E+ +M+ I PNL+T+NTLI G C ++ K
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKA 357
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
L L G P T+N ++ C+ A + EM E G+ P+ +TY ILI +
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDT 417
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
++ ++++L M+ ++PD++T++ LI FC ++ +A + F SM+ P+
Sbjct: 418 FARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPN 477
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
Y+ ++ K G A + F ME+ P+ + ++E L ++ + +EA +V+
Sbjct: 478 EVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVE 537
Query: 490 TSKERGIS 497
+ GI
Sbjct: 538 KMIDSGIG 545
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 167/371 (45%), Gaps = 41/371 (11%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G SP+ +Y +ID K I+ A F +M + +TY +LIHG+ + G+ +
Sbjct: 192 FGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQ 251
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ ++M+ G PN++TY +++ C R + F+V + M+ER V N T +L+
Sbjct: 252 GFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIG 311
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ R + ++A E++ + M+ + + L+ NTL+ +A ++ R + RG
Sbjct: 312 GLCREMKANEANEVMDQ-MKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLS 370
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA--------- 233
P T++ V+ D + ++ +RG+KP TY +L++ ++
Sbjct: 371 PSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430
Query: 234 --------------------------GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
GR E R + + + N YN ++ +CK
Sbjct: 431 RSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCK 490
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
RA + REM ++++ PN+ ++ +I CK+ + + L+ +++ G P
Sbjct: 491 EGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPS--- 547
Query: 328 FNSMIDCLCRA 338
+S+++ + RA
Sbjct: 548 -DSILNLISRA 557
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 132/503 (26%), Positives = 241/503 (47%), Gaps = 40/503 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P+ Y++++ + K+ ++ A F +M C+PD +N+L+ G+ R + E
Sbjct: 73 LGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHE 132
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L + M G P+V TY +I G C K++ E +LE MK+ +V P T +L+
Sbjct: 133 ARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLID 192
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +A+E+ + E C Y + + K+ G L
Sbjct: 193 HLCKFTRLQQAYEVFEKMAE-----GPCACTEPAY-----------SVLFNKLQRAGKLV 236
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA-GRDVEGDRY 242
E+S Y+ C ++ V +TY L++ L K G +VE +
Sbjct: 237 EASRV-YSDMC------------------RKNVCMTDNTYSLVVLGLSKMDGGNVEAAKL 277
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + ++ + +Y+++I+ CK A E+ +EMR R I+P +VT+NTL+ G
Sbjct: 278 VTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLS 337
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
A++ EL +L+ G PD ++N MI C +A +M++ G+ NT T
Sbjct: 338 TAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWT 397
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQA---DRI-SPDIYTFNALIQSFCRMNKIEKAEKAF 418
YN +I + + LF++MQ+ D++ +P+++T+ LI S C+ +++E+A K
Sbjct: 398 YNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLL 457
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+M G P + L+ L ++GR D+A + + M + C +SN++L+ ++++
Sbjct: 458 SAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRR 517
Query: 479 GRFEEAHDIVKTSKERGISFKSF 501
G +EA D +K + GI F
Sbjct: 518 GSVDEAKDFLKQMTDTGIVPDKF 540
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/496 (24%), Positives = 210/496 (42%), Gaps = 40/496 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P +N ++ L ++ I A F+ M+ CKPD TYN +I G+C+ +DEA
Sbjct: 109 GCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEA 168
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE---------------- 108
+ L+++M+ +P TYT LID C R+ + + V E M E
Sbjct: 169 VFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNK 228
Query: 109 -------------------RNVCPNEATVRSLVHGVFRCLDPH-KAFELLIRFMEREPLT 148
+NVC + T +V G+ + + +A +L+ M ++
Sbjct: 229 LQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAP 288
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
+ L+ L EA + ++M RG P T++ + L++ L + +
Sbjct: 289 DFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELT 348
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ +G P +Y L++ G E + KD +V N +YN +I F K
Sbjct: 349 YFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKD 408
Query: 269 NMMDRATEICREMR----DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
A + + M+ D+ APN+ T+ LIS CK +V + +LL + + GF P
Sbjct: 409 EAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPS 468
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
+ ++ L RA R +DA + EM + NIL+ + G V + +
Sbjct: 469 LKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLK 528
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+M I PD +T++ L+ C K ++A K ++ G RP+N L+ AL G
Sbjct: 529 QMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQG 588
Query: 445 RFDEAKQTFLSMEQNG 460
F A + + + G
Sbjct: 589 DFQGAYEFYCWLPSVG 604
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 185/451 (41%), Gaps = 48/451 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+SP+ Y +ID L K + AY F++M+ C Y++L + + R G + EA
Sbjct: 180 VSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEAS 239
Query: 66 R------------------------------------LVKQMEGLGYAPNVYTYTILIDG 89
R LV +M G AP+ Y Y+ILI+G
Sbjct: 240 RVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILING 299
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C A+R E + + M+ R + P T +L+ G+ A EL +++ L
Sbjct: 300 LCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPD 359
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
N ++ N +EA + + M G + + T+++ ++ G +E
Sbjct: 360 TCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNF----MIVGFIKDEAWSSAW 415
Query: 210 TFIKRGVK--------PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
KR P TY +L+ +L K + E + L+ + V ++ + ++
Sbjct: 416 MLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVL 475
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
+ + +D A E+ +EM + + + N L+ G + V + ++ L + + G
Sbjct: 476 LSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGI 535
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
PDKFT++ ++ LC + + A + E+V G P L+ +LCA GD +
Sbjct: 536 VPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYE 595
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
+ + + + + N L+ S C K++
Sbjct: 596 FYCWLPSVGVEVTLGMHNTLVTSCCLARKLD 626
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 141/322 (43%), Gaps = 37/322 (11%)
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
++ G+ P Y L+ L KAG E + YL + NV SYN++ID +CK +
Sbjct: 2 LEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRM-PQHCAPNVVSYNIIIDGYCKARNI 60
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
++A REM + P +++++ CK V K ++ + G +PD FN +
Sbjct: 61 EKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVL 120
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
+ L RA + +A + M G P+ +TYN +I LC + ++ L ++M+ + +
Sbjct: 121 LSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDV 180
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
SP T+ LI C+ ++++A + F M +YS L L ++G+ EA +
Sbjct: 181 SPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASR 240
Query: 452 TFLSM--------------------EQNGCN----------------PDSYTSNLILETL 475
+ M + +G N PD Y ++++ L
Sbjct: 241 VYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGL 300
Query: 476 VQQGRFEEAHDIVKTSKERGIS 497
+ R EA ++ + + RGIS
Sbjct: 301 CKARRPGEAKEMFQEMRGRGIS 322
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 110/214 (51%), Gaps = 3/214 (1%)
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV-MLLECGFKPDKFTFNSMIDCLCRAH 339
M + + PN + +N LIS CK + + L M C P+ ++N +ID C+A
Sbjct: 1 MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCA--PNVVSYNIIIDGYCKAR 58
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
E AL L EM E G PP Y+ +++S C G+V++++ +F +M A PDI FN
Sbjct: 59 NIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFN 118
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
L+ R KI +A + F SM + G +PD +Y+ +I L K + DEA M+Q
Sbjct: 119 VLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQE 178
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+P T +++ L + R ++A+++ + E
Sbjct: 179 DVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAE 212
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 97/182 (53%), Gaps = 1/182 (0%)
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
+LE G P+ +N++I CLC+A +A L M + PN ++YNI+I C +
Sbjct: 1 MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARN 59
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+ ++L ++M+ P + +++++QSFC+ + KA F M G PD +++
Sbjct: 60 IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
L+ L ++ + EA++ F SM GC PD T N ++ L + + +EA +++ K+
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179
Query: 496 IS 497
+S
Sbjct: 180 VS 181
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 220/494 (44%), Gaps = 3/494 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ + + N++I+ K I A +M KPD ++YN L+ G CR G E
Sbjct: 361 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 420
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L +M G P V TY L+ G C + ++ +M + V P+E +L+
Sbjct: 421 AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLD 480
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+F+ + A L + R ++ NT++ L EA I KM D G P
Sbjct: 481 GLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP 540
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ + ++ + + + + P Y L+ L+K+ R VE L
Sbjct: 541 DGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLL 600
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ L N+ +Y +ID +CK M+D+A EM + ++ N++ +T++SG +
Sbjct: 601 TEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRL 660
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + L+ +++ GF PD F + R + D L E + + PN I Y
Sbjct: 661 GRIDEANLLMQKMVDHGFFPDHECF---LKSDIRYAAIQKIADSLDESCKTFLLPNNIVY 717
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI I LC G V + R F + PD +T+ LI + +++A + ML
Sbjct: 718 NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLR 777
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL P+ +Y+ALI L KS D A++ F + Q G P+ T N +++ + G +
Sbjct: 778 RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDA 837
Query: 484 AHDIVKTSKERGIS 497
A + E GIS
Sbjct: 838 AFKLKDKMIEEGIS 851
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/497 (26%), Positives = 233/497 (46%), Gaps = 11/497 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS R N++++ LVK+ A+ +QQM PD F +I+++ C+ G VDEA
Sbjct: 186 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEA 245
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
VK+ME LG PN+ TY LI+G+ + V VL+ M E+ V N T L+ G
Sbjct: 246 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 305
Query: 125 VFRCLDPHKAFELLIRFMEREP--LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ +A E ++R M+ E + + L+ +A +L +M G
Sbjct: 306 YCKQCKMDEA-EKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGL- 363
Query: 183 PESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
T + L+ G +++E G++ + +KP +Y L++ + G E
Sbjct: 364 ---KTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 420
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + ++ + V +YN ++ C+V D A +I M +AP+ V ++TL+
Sbjct: 421 AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLD 480
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G K L +L GF + TFN+MI LC+ + +A + +M + G P
Sbjct: 481 GLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP 540
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ ITY LI C +V ++ ++ M+ + ISP I +N+LI + ++ +
Sbjct: 541 DGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLL 600
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M GL P+ +Y ALI K G D+A ++ M +NG + + + ++ L +
Sbjct: 601 TEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRL 660
Query: 479 GRFEEAHDIVKTSKERG 495
GR +EA+ +++ + G
Sbjct: 661 GRIDEANLLMQKMVDHG 677
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 224/491 (45%), Gaps = 3/491 (0%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
S +++ ++ V+ A F M P + N L++ + + G A +
Sbjct: 155 SPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVY 214
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
+QM +G P+V+ +I+++ FC +V E ++ M+ V PN T SL++G +
Sbjct: 215 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLING-YVS 273
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYL-PESS 186
L +A + +++FM + +++ +V TLL + EA +LR M + L P+
Sbjct: 274 LGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDER 333
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ + +++ +LD ++ G+K L+ K G E + + +
Sbjct: 334 AYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRM 393
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
L + SYN ++D +C+ A +C +M I P ++T+NTL+ G C+
Sbjct: 394 VDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAF 453
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
++ ++++ G PD+ +++++D L + FE A +++ G + IT+N +
Sbjct: 454 DDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTM 513
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I LC +G + + +F KM+ SPD T+ LI +C+ + + +A K +M +
Sbjct: 514 ISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXI 573
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P Y++LI L KS R E M G P+ T +++ ++G ++A
Sbjct: 574 SPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFS 633
Query: 487 IVKTSKERGIS 497
E G+S
Sbjct: 634 SYFEMTENGLS 644
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/516 (22%), Positives = 234/516 (45%), Gaps = 26/516 (5%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS L S + +AV+ L + + L + +F +P+ +Y L+H + R +
Sbjct: 59 ISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQ-QNFRPNVKSYCKLVHILSRGRM 117
Query: 61 VDEALRLVKQMEGL---------------------GYAPNVYTYTILIDGFCNAKRVAEV 99
DE + Q+ L ++P V+ +++ +
Sbjct: 118 YDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFD--MILKVYVEKGLTKNA 175
Query: 100 FRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
V + M + P+ + SL++ + + + H A + + + + + + ++
Sbjct: 176 LYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNA 235
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
+ EAA ++KM + G P T+ + V+ D+ G+L ++GV
Sbjct: 236 FCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRN 295
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEIC 278
TY LL++ K + E ++ L + ++ LV + +Y ++ID +C+ +D A +
Sbjct: 296 VVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLL 355
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
EM + NL N+LI+G+CK E+H+ ++ +++ KPD +++N+++D CR
Sbjct: 356 DEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCRE 415
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+A + +M++ G+ P +TYN L++ LC +G +L+++ M ++PD +
Sbjct: 416 GHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGY 475
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+ L+ +M E A + +L G +++ +I L K G+ EA++ F M+
Sbjct: 476 STLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD 535
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
GC+PD T +++ + +A VK + ER
Sbjct: 536 LGCSPDGITYRTLIDGYCKASNVGQAFK-VKGAMER 570
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 203/447 (45%), Gaps = 3/447 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P Y+ ++D L K + + A ++ + R T+N +I G+C++G + EA
Sbjct: 467 GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 526
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M+ LG +P+ TY LIDG+C A V + F+V M+ + P+ SL+ G
Sbjct: 527 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISG 586
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F+ + +LL R + L+ M +A + +M + G
Sbjct: 587 LFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSAN 646
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
V+ L ++E ++ + G P +L + Y A + + L+
Sbjct: 647 IIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLK-SDIRYAAIQKIADS--LD 703
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
K L+ N YN+ I CK +D A + + P+ T+ TLI G+
Sbjct: 704 ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 763
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V + L +L G P+ T+N++I+ LC++ + A ++ + G+ PN +TYN
Sbjct: 764 NVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYN 823
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C IG++ + +L KM + ISP + T++ALI C+ IE++ K M+
Sbjct: 824 TLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKA 883
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQ 451
G+ Y L++ K+ ++E +
Sbjct: 884 GVDSKLIEYCTLVQGGFKTSNYNEMSK 910
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 90/179 (50%), Gaps = 3/179 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G P Y +I + ++D A+ +M P+ TYN LI+G+C+
Sbjct: 740 LSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 799
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD A RL ++ G PNV TY LIDG+C + F++ + M E + P+ T +
Sbjct: 800 VDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSA 859
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL---YRLSNNSMASEAAAILRKM 176
L++G+ + D ++ +LL + ++ ++ + TL+ ++ SN + S+ A+ + M
Sbjct: 860 LINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEMSKPEALKQNM 918
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 129/497 (25%), Positives = 230/497 (46%), Gaps = 5/497 (1%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN +I L++S A +++M + KP TY+ L+ + + + + L+K+ME
Sbjct: 195 YNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEME 254
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
LG PNVYT+TI I A ++ E + + M + P+ T L+ +
Sbjct: 255 DLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLE 314
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A EL ++ +++ TLL + ++ +M GY+P+ TF V
Sbjct: 315 NAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILV 374
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L D +E D K+G+ P TY L+ L +AGR + + L + +
Sbjct: 375 DVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQ 434
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+YN+ ID F K +A E +M+ + I PN+V N + + + + + +
Sbjct: 435 PTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTM 494
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L E G PD T+N M+ C + + ++A++ LSEM+ G P+ I N LI SL
Sbjct: 495 FNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYK 554
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G V + ++F +M+ ++SP + T+N L+ + +++KA + F SM+ P+ S
Sbjct: 555 AGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTIS 614
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA----HDIV 488
++ L+ K+ + A + F M C PD T N ++ L+++ + A H +
Sbjct: 615 FNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK 674
Query: 489 KTSKERGISFKS-FPGL 504
K+ ++ + PGL
Sbjct: 675 KSMHPDHVTICTLLPGL 691
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 233/494 (47%), Gaps = 3/494 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P + N++ID+L K+ +D A+ F +M + P TYN L+ G+ + G V +A
Sbjct: 537 GCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKA 596
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L + M +PN ++ L+D FC V ++ M + P+ T ++++G
Sbjct: 597 IELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYG 656
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK-MGDRGYLP 183
+ + + AF + + +C TLL L +A +I R M +
Sbjct: 657 LIKENKVNHAFWFFHQLKKSMHPDHVTIC-TLLPGLVKCGQIGDAISIARDFMYQVRFRV 715
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
S ++ + + ++++ + + G+ S + L+ L K R++ +
Sbjct: 716 NRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIF 775
Query: 244 NHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ K +S + SYN +I +V+ ++A ++ ++M++ AP+ TFN L++ H K
Sbjct: 776 DKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGK 835
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ + EL ++ KPD T+N +I L +++ + ALD ++V P T
Sbjct: 836 SGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRT 895
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y LI L +G + ++RLF++M P+ FN LI + ++ E A + F M+
Sbjct: 896 YGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMV 955
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G+RPD SY+ L+ L +GR DEA F ++ G +PD N I+ L + R E
Sbjct: 956 NEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRME 1015
Query: 483 EAHDIVKTSKERGI 496
EA + + RGI
Sbjct: 1016 EALALYNEMRNRGI 1029
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 223/494 (45%), Gaps = 25/494 (5%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ +SP+ YN ++ L K + A F+ M +C P+ ++N L+ C+ V+
Sbjct: 571 MKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVEL 630
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL++ +M + P+V TY +I G +V F +K +++ P+ T+ +L+
Sbjct: 631 ALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLP 689
Query: 124 GVFRC------LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
G+ +C + + F +RF + L+ TL+ + ++ +L
Sbjct: 690 GLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLN--- 746
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR-GVKPRFSTYLLLMEALYKAGRD 236
G E S V L I D F K+ G+ P ++Y L+ L +
Sbjct: 747 --GICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELL----E 800
Query: 237 VEGDRYLNHVFKDRLVSNVN------SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
V +FKD + NV ++NM++ K + E+ +EM R P+
Sbjct: 801 VHYTEKAWDLFKD--MKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDA 858
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
+T+N +IS K + K + L+ F+P T+ +ID L + R E+A+ E
Sbjct: 859 ITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEE 918
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M ++G PN +NILI IGD + +LF++M + I PD+ ++ L+ C +
Sbjct: 919 MSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGR 978
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+++A F + + GL PD +Y+ +I L KS R +EA + M G PD YT N
Sbjct: 979 VDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNS 1038
Query: 471 ILETLVQQGRFEEA 484
++ L G E+A
Sbjct: 1039 LMLNLGLAGMVEQA 1052
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/532 (25%), Positives = 226/532 (42%), Gaps = 40/532 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ + I L ++ ID AY F++M + C PD TY +LI +C G ++
Sbjct: 256 LGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLEN 315
Query: 64 ALRLV-----------------------------------KQMEGLGYAPNVYTYTILID 88
A L QME GY P+V T+TIL+D
Sbjct: 316 AKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVD 375
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
C A+ E F ++M+++ + PN T +L+ G+ R A +LL
Sbjct: 376 VLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQP 435
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
N + + +A KM +G +P + ++ L L E +
Sbjct: 436 TAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMF 495
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ + G+ P TY ++M+ K G+ E L+ + ++ +V N +ID K
Sbjct: 496 NGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKA 555
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+D A ++ M+D ++P +VT+NTL+SG K+ V K EL ++E P+ +F
Sbjct: 556 GRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISF 615
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N+++DC C+ E AL S+M P+ +TYN +I L V + F +++
Sbjct: 616 NTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK 675
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKA-EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ PD T L+ + +I A A M + R + + L+ + D
Sbjct: 676 S-MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMD 734
Query: 448 EAKQTFLSMEQNG-CNPDSYTSNLILETLVQQGRFEEAHDIV-KTSKERGIS 497
+A + NG C DS+ L+ L + R A+ I K +K+ GIS
Sbjct: 735 KAIIFAEELVLNGICREDSFLIPLV-RVLCKHKRELYAYQIFDKFTKKLGIS 785
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/495 (25%), Positives = 226/495 (45%), Gaps = 38/495 (7%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP+T +N ++D K++ ++LA F +M+V CKPD TYN +I+G+ + V+ A
Sbjct: 609 SPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFW 668
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV------------FRV------------ 102
Q++ P+ T L+ G ++ + FRV
Sbjct: 669 FFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGT 727
Query: 103 -LEIMKERNVCPNEATV-------RSLVHGVFRCLDPHK----AFELLIRFMEREPLTQK 150
+E ++ + E V S + + R L HK A+++ +F ++ ++
Sbjct: 728 LVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPT 787
Query: 151 LVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
L N L+ L +A + + M + G P++ TF+ + + E +
Sbjct: 788 LASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYK 847
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
I R KP TY +++ +L K+ + + + +Y +ID KV
Sbjct: 848 EMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVG 907
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
++ A + EM D PN FN LI+G+ K + +L ++ G +PD ++
Sbjct: 908 RLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYT 967
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++DCLC A R ++AL +E+ G+ P+ I YN +I L + +L L+ +M+
Sbjct: 968 ILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNR 1027
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
I PD+YT+N+L+ + +E+A++ + + GL PD F+Y+ALI+ S + A
Sbjct: 1028 GIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHA 1087
Query: 450 KQTFLSMEQNGCNPD 464
+ +M +GCNP+
Sbjct: 1088 YTVYKNMMVDGCNPN 1102
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 159/347 (45%), Gaps = 20/347 (5%)
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI--------------- 212
E +L+ M D + ++ Y+++ T L ETC + F+
Sbjct: 91 EVLGVLKSMTDP---IRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEF 147
Query: 213 --KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
K+ ++ TYL + +AL G + LN + K V N SYN +I +
Sbjct: 148 MQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGF 207
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
A E+ R M + P+L T++ L+ K + LL + + G +P+ +TF
Sbjct: 208 CGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTI 267
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
I L RA + ++A + M + G P+ +TY +LI +LC G + + LF KM+A+
Sbjct: 268 CIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANG 327
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
PD + L+ F ++ ++ + M G PD +++ L+ L K+ FDEA
Sbjct: 328 HKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAF 387
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
TF M + G P+ +T N ++ L++ GR E+A ++ T + G+
Sbjct: 388 ATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQ 434
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN +I+ L KS ++ A + +M PD +TYN L+ + G+V++A
Sbjct: 993 GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
R+ ++++ G P+V+TY LI G+ ++ + V + M PN T L
Sbjct: 1053 KRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 234/485 (48%), Gaps = 5/485 (1%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
RL + ++D + K ++I L FQ+M + P ++ I R + L KQ
Sbjct: 59 RLRSGIVD-IKKDDAIAL----FQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQ 113
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
+E G A N+YT I+I+ FC + + VL + + P+ T +L+ G+F
Sbjct: 114 LELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGK 173
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A L+ R +E + N+++ + + S A +LRKM +R + T+
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L ++ + +G+K TY L+ L KAG+ +G L +
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+V NV ++N+++D F K + A E+ +EM R I+PN++T+NTL+ G+C + +
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+L +++ PD TF S+I C R +D + + + G+ N +TY+IL++
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C G + + LFQ+M + + PD+ T+ L+ C K+EKA + F + +
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
Y+ +I+ + K G+ ++A F S+ G P+ T +++ L ++G EA+ +++
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 491 SKERG 495
+E G
Sbjct: 534 MEEDG 538
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 231/490 (47%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ A+ ++ +L +Q+ ++ + +T NI+I+ CR A +
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ LGY P+ T+ LI G +V+E +++ M E P+ T S+V+G+ R
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D A +LL + ER +T++ L + A ++ ++M +G T
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ V L N+ +L + R + P T+ +L++ K G+ E + +
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ N+ +YN ++D +C N + A + M +P++VTF +LI G+C V
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
++ + + G + T++ ++ C++ + + A + EMV GV P+ +TY IL+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G + ++L +F+ +Q ++ I + +I+ C+ K+E A F S+ G++
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P+ +Y+ +I L K G EA ME++G P+ T N ++ ++ G + +
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 488 VKTSKERGIS 497
++ K G S
Sbjct: 566 IEEMKSCGFS 575
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 214/453 (47%), Gaps = 4/453 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P T +N +I L + A + +M + C+PD TYN +++GICR G
Sbjct: 152 LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 211
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L+++ME +V+TY+ +ID C + + + M+ + + + T SLV
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + + LL + RE + + N LL EA + ++M RG P
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + L+E +LD ++ P T+ L++ R +G +
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
++ K LV+N +Y++++ FC+ + A E+ +EM + P+++T+ L+ G C +
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ K E+ L + + ++I+ +C+ + EDA + + GV PN +TY
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
++I LC G ++ + L +KM+ D +P+ T+N LI++ R + + K M +
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
G D S +I L+ SG D ++FL M
Sbjct: 572 CGFSADASSIKMVIDMLL-SGELD---KSFLDM 600
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 221/476 (46%), Gaps = 6/476 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ + N +I+ + AY ++ +PD T+N LI G+ G V EA
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ LV +M G P+V TY +++G C + + +L M+ERNV + T +++
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 125 VFR--CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ R C+D + L + ME + + +V N+L+ L ++ A +L+ M R
Sbjct: 238 LCRDGCIDAAIS---LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P TF+ + V L E + I RG+ P TY LM+ R E +
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L+ + +++ ++ ++ +I +C V +D ++ R + R + N VT++ L+ G C
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ ++ EL ++ G PD T+ ++D LC + E AL+ ++ + + +
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y +I +C G V + LF + + P++ T+ +I C+ + +A M
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
G P++ +Y+ LI+A ++ G + + M+ G + D+ + ++++ L+
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 590
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+DA+ EM+ P+ + ++ ++ L ++++ + I+ +IYT N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I FCR K A ++ LG PD +++ LIK L G+ EA M +NGC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
PD T N I+ + + G A D+++ +ER + F
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF 229
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS G+ + Y+ ++ +S I LA FQ+M PD TY IL+ G+C G
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++AL + + ++ + YT +I+G C +V + + + + + V PN T
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ + +A LL + E NTL+ + + +A ++ +M G
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Query: 181 YLPESSTFDYTVTCLVTG 198
+ ++S+ + L++G
Sbjct: 574 FSADASSIKMVIDMLLSG 591
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 129/491 (26%), Positives = 226/491 (46%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P R NA + L K+ DL+ F+ M P FTYNI+I +C+ G + A
Sbjct: 93 VLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTAR 152
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L +QM+ +G P++ TY LIDG+ + E + E MK P+ T +L++
Sbjct: 153 SLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSF 212
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ +AFE +++ + +TL+ L M A M G LP
Sbjct: 213 CKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNE 272
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + +L E + D ++ V TY L++ L + G E +
Sbjct: 273 FTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRA 332
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ K + N+ +Y +I KV MD+A E+ EMR++DI P+++ + T++ G C +++
Sbjct: 333 MGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESK 392
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + + ++ + E G + + +++D +A +A++ L EM + G +T+
Sbjct: 393 LEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCA 452
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI LC G V ++ F +M + P++ + ALI C+ N I A+K F M
Sbjct: 453 LIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKN 512
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ PD +Y+A+I +K G F EA M + G D Y ++ L Q G+ ++A
Sbjct: 513 MIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQAR 572
Query: 486 DIVKTSKERGI 496
+ +GI
Sbjct: 573 KFLAEMIGKGI 583
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 191/446 (42%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G++P YN +ID K +D + F++M C+PD TYN LI+ C+ +
Sbjct: 161 MGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLR 220
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++M+ PNV +Y+ LID C + + M + PNE T SL+
Sbjct: 221 AFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLID 280
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +AF L ++ + TLL L M +EA + R MG G P
Sbjct: 281 ANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTP 340
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ + + +++ + + ++ +KP + ++ L + E +
Sbjct: 341 NLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIM 400
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + +N Y ++D + K A + EMRD +VTF LI G CK
Sbjct: 401 TEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKR 460
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V + + + +P+ + ++ID LC+ + DA EM + + P+ I Y
Sbjct: 461 GLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAY 520
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+I G+ +L + KM I D+Y + +L+ + ++++A K M+
Sbjct: 521 TAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIG 580
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEA 449
G+ PD + L++ + G DEA
Sbjct: 581 KGIIPDETLCTRLLRKHYELGNIDEA 606
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 194/417 (46%), Gaps = 6/417 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F+G P YNA+I++ K + A+ F++M KP+ +Y+ LI +C+ G+
Sbjct: 193 MKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGM 252
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A++ M +G PN +TY+ LID C A + E F + + M + +V N T +
Sbjct: 253 MQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTT 312
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY--RLSNNSMASEAAAILRKMGD 178
L+ G+ ++A EL R M + +T L T L + SM +A + +M +
Sbjct: 313 LLDGLCEEGMMNEAEELF-RAMGKAGVTPNLQAYTALIHGHIKVRSM-DKAMELFNEMRE 370
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR-GVKPRFSTYLLLMEALYKAGRDV 237
+ P+ + V L + L E C I+ T +K G+ Y LM+A +KAG
Sbjct: 371 KDIKPDILLWGTIVWGLCSESKLEE-CKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRT 429
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E L + V ++ +ID CK ++ A M D D+ PN+ + LI
Sbjct: 430 EAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALI 489
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G CK+ + ++L + + PDK + +MID + F++AL+ ++M+E G+
Sbjct: 490 DGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIE 549
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
+ Y L+ L G V ++ + +M I PD L++ + I++A
Sbjct: 550 LDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEA 606
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 134/280 (47%)
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
P F + L L + G + + K R++ S N + K D + +
Sbjct: 60 PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
R+M IAP + T+N +I CK+ ++ R L + + G PD T+N++ID +
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
++++ EM G P+ ITYN LI S C + R+ F++M+ + P++ +
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
++ LI + C+ ++ A K F M +GL P+ F+YS+LI A K+G EA M
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEML 299
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
Q + + T +L+ L ++G EA ++ + + G++
Sbjct: 300 QEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVT 339
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 78/183 (42%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG + + A+ID L K + A F +M +P+ Y LI G+C+ + +
Sbjct: 441 LGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGD 500
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +L +M+ P+ YT +IDG E + M E + + SLV
Sbjct: 501 AKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVW 560
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ +C +A + L + + + + +C LL + EA + ++ ++G +
Sbjct: 561 GLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLIH 620
Query: 184 ESS 186
+S
Sbjct: 621 GNS 623
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 125/472 (26%), Positives = 221/472 (46%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y +I L+KS A +++M + KP TY+ L+ + + ++ + L+++ME
Sbjct: 195 YIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEME 254
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
LG PN+YT+TI I A ++ E + +L+ M + P+ T L+ + +
Sbjct: 255 SLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLN 314
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A EL ++ ++ TLL + S++ +M GYLP+ TF +
Sbjct: 315 NAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILI 374
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L ++E G LD K+GV P TY L+ L + R E N + L
Sbjct: 375 DALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLE 434
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+ +Y + ID + K +A + +M+ I PN+V N + + + + +E
Sbjct: 435 TTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEF 494
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L +CG PD T+N ++ C +A R +DA+ LSEM E G P + N LI +L
Sbjct: 495 FNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYK 554
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
V + ++FQ+M+ +++P + T+N L+ + ++++A F M+ P+ S
Sbjct: 555 ADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTIS 614
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
++ L+ L K+G D A + M + C PD T N ++ L+++ R A
Sbjct: 615 FNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYA 666
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 231/491 (47%), Gaps = 13/491 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI PS + Y+A++ AL K I+ Q+M +P+ +T+ I I + R G +DEA
Sbjct: 222 GIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEA 281
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV-- 122
++K+M+ G P+V TYT+LID CNA ++ + MK + P+ T +L+
Sbjct: 282 YGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDK 341
Query: 123 ---HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMGD 178
HG LD K F ME + +V T+L L EA L M
Sbjct: 342 FSDHGD---LDAIKEF---WSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKK 395
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+G P T++ + L+ L+E + ++ G++ TY+L ++ K+G +
Sbjct: 396 QGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGK 455
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + +V N+ + N + + ++ A E ++ +AP+ +T+N L+
Sbjct: 456 AIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMR 515
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
+ K V +LL + E G P+ NS+ID L +A R ++A M E + P
Sbjct: 516 CYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAP 575
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+TYN L+ L G V + LF+ M AD P+ +FN L+ C+ +++ A K
Sbjct: 576 TVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKML 635
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
F M + PD +Y+ +I LIK R + A F M++ PD T +L +++
Sbjct: 636 FRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKD 694
Query: 479 GRFEEAHDIVK 489
GR E+A + K
Sbjct: 695 GRIEDAFRVAK 705
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/498 (26%), Positives = 229/498 (45%), Gaps = 40/498 (8%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+T +N ++D L K+ +DLA +M+ C PD TYN +I+G+ + V+ A L
Sbjct: 610 PNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWL 669
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE---------------------IM 106
QM+ + Y P+ T L+ G R+ + FRV + I+
Sbjct: 670 FHQMKKVIY-PDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGIL 728
Query: 107 KE---------------RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL 151
E +C +++ + LV + + A+ + ++ + +T L
Sbjct: 729 IEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSL 788
Query: 152 -VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
N+L+ L + A + KM + G P+ T++ + L + E + +
Sbjct: 789 EAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEE 848
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGR-DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+ RG KP T+ +++ L K+ D D Y + + D +Y +ID K+
Sbjct: 849 MLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGD-FSPTPWTYGPLIDGLLKLG 907
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
++ A + EM D PN +N L++G K +V EL +++ G +PD +++
Sbjct: 908 RLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYS 967
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
M+DCLC + +DAL E+ G+ P+ + YN++I L V +L LF +M+
Sbjct: 968 IMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNR 1027
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
I+PD+YT+NALI + +E+A K + + GL P+ F+Y+ALI+ SG D A
Sbjct: 1028 GITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRA 1087
Query: 450 KQTFLSMEQNGCNPDSYT 467
+ M GC P++ T
Sbjct: 1088 YAVYKKMMVGGCRPNTGT 1105
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 150/602 (24%), Positives = 242/602 (40%), Gaps = 114/602 (18%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ + I L ++ ID AY ++M C PD TY +LI +C G ++
Sbjct: 256 LGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNN 315
Query: 64 ALRLV-----------------------------------KQMEGLGYAPNVYTYTILID 88
A L +ME GY P+V T+TILID
Sbjct: 316 AKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILID 375
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
C +V E F L++MK++ V PN T +L+ G+ R +A EL F E L
Sbjct: 376 ALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALEL---FNSMESLG 432
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILR---KMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
+ T + + + E+ ++ KM G +P + ++ L L E
Sbjct: 433 LETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAK 492
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
+ K G+ P TY +LM KAGR + + L+ + ++ V N +ID
Sbjct: 493 EFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTL 552
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
K + +D A ++ + M++ +AP +VT+NTL++G K+ V + L ++ P+
Sbjct: 553 YKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNT 612
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
+FN+++DCLC+ + AL L M E P+ +TYN +I L V + LF +
Sbjct: 613 ISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQ 672
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIE---------------KAEKAFFSMLTLGLR--- 427
M+ I PD T L+ + +IE A+ +F+ L G+
Sbjct: 673 MKK-VIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEA 731
Query: 428 ------------------PDNFSYSALIKALIKSGRFDEAKQTFL--------------- 454
D+ L+K L K G+ +A FL
Sbjct: 732 EIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAY 791
Query: 455 ---------------------SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
M+ GC PD +T NL L+ L + G+ +E D+ +
Sbjct: 792 NSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLF 851
Query: 494 RG 495
RG
Sbjct: 852 RG 853
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 141/535 (26%), Positives = 234/535 (43%), Gaps = 40/535 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P + N++ID L K++ +D A+ FQ+M + P TYN L+ G+ + G V EA
Sbjct: 537 GCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEA 596
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L K M PN ++ L+D C V ++L M E N P+ T ++++G
Sbjct: 597 TALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYG 656
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK----MGDR- 179
+ + + AF L + M++ + TLL + + +A + ++ +GD
Sbjct: 657 LIKENRVNYAFWLFHQ-MKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHA 715
Query: 180 ----------GYLPESST-----FDYTVTCLVTGLDLNETCGILDTFIKRG--------- 215
G L E+ F ++ C D + ++ K G
Sbjct: 716 DGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVF 775
Query: 216 --------VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR-LVSNVNSYNMVIDCFC 266
+ P Y L++ L KA R E L + K+ +V +YN+ +D
Sbjct: 776 LKLTKSFCITPSLEAYNSLIDGLLKA-RLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALG 834
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K + ++ EM R PN +T N +I G K + K +L L+ F P +
Sbjct: 835 KSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPW 894
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+ +ID L + R E+A EM+++G PN YNIL+ GDV + LF++M
Sbjct: 895 TYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRM 954
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ I PD+ +++ ++ C + K++ A F + GL PD Y+ +I L +S R
Sbjct: 955 VKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRV 1014
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+EA F M G PD YT N ++ L G EEA + + + +G+ F
Sbjct: 1015 EEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVF 1069
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 127/522 (24%), Positives = 236/522 (45%), Gaps = 40/522 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P+ YN ++ L K + A F+ M D C P+ ++N L+ +C+ G VD AL
Sbjct: 573 LAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLAL 632
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+++ +M + P+V TY +I G RV F + MK + + P+ T+ +L+ GV
Sbjct: 633 KMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK-KVIYPDYVTLCTLLPGV 691
Query: 126 FRCLDPHKAFELLIRFMER----------EPL----------------TQKLVCNT---- 155
+ AF + F+ E L + LVCNT
Sbjct: 692 IKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICED 751
Query: 156 ------LLYRLSNNSMASEAAAILRKMGDRGYL-PESSTFDYTVTCLVTGLDLNETCGIL 208
L+ L + A +A + K+ + P ++ + L+ G+
Sbjct: 752 DSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLF 811
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVE-GDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
G P TY L ++AL K+G+ E D Y +F+ N ++N+VI K
Sbjct: 812 YKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRG-CKPNTITHNIVIFGLVK 870
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
N +D+A ++ ++ D +P T+ LI G K + + ++ +L+ G P+
Sbjct: 871 SNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPL 930
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+N +++ + E A + MV+ G+ P+ +Y+I++ LC +G V +L F++++
Sbjct: 931 YNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELK 990
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ PD+ +N +I R ++E+A F M G+ PD ++Y+ALI L +G +
Sbjct: 991 LSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVE 1050
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
EA + + ++ G P+ +T N ++ G + A+ + K
Sbjct: 1051 EAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYK 1092
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 169/373 (45%), Gaps = 35/373 (9%)
Query: 156 LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRG 215
L++ L + EA + R+M G P T+ + L D+ G+L G
Sbjct: 198 LIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLG 257
Query: 216 VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT 275
++P T+ + + L +AG+ E L + +V +Y ++ID C ++ A
Sbjct: 258 LRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAK 317
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
E+ +M+ P+ VT+ TL+ ++ +E + G+ PD TF +ID L
Sbjct: 318 ELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDAL 377
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI---------------------- 373
C+ + ++A L M + GV PN TYN LI L +
Sbjct: 378 CKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTA 437
Query: 374 -------------GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
G+ ++++ F+KM+ + I P+I NA + S ++E+A++ F
Sbjct: 438 YTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNG 497
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+ GL PD +Y+ L++ K+GR D+A + ME+NGC+P+ N +++TL + R
Sbjct: 498 LKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADR 557
Query: 481 FEEAHDIVKTSKE 493
+EA + + KE
Sbjct: 558 VDEAWKMFQRMKE 570
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 194/415 (46%), Gaps = 16/415 (3%)
Query: 98 EVFRVLEIMKERNVC----PNEATVRSLVHGVFRC------LDPHKAFE---LLIRFMER 144
EV+RVL+ + + N + A + ++H C L H+ E ++ M++
Sbjct: 91 EVYRVLKSISDPNQAFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQK 150
Query: 145 EPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
+ + + + +++ L EA L KM G++ ++ + L+ E
Sbjct: 151 QIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCRE 210
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD-RLVSNVNSYNMVI 262
+ + G+KP TY LM AL K RD+E L + L N+ ++ + I
Sbjct: 211 ALKVYRRMVSEGIKPSLKTYSALMVALGKR-RDIETVMGLLQEMESLGLRPNIYTFTICI 269
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
+ +D A I + M D P++VT+ LI C +++ +EL + + K
Sbjct: 270 RILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHK 329
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
PD+ T+ +++D + + SEM G P+ +T+ ILI +LC +G V +
Sbjct: 330 PDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGT 389
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
M+ ++P+++T+N LI R+N++++A + F SM +LGL ++Y I K
Sbjct: 390 LDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGK 449
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
SG +A +TF M+ NG P+ N L +L +QGR EEA + K+ G++
Sbjct: 450 SGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLA 504
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 205/467 (43%), Gaps = 40/467 (8%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN VI L+K N ++ A+ F QM PD T L+ G+ + G +++A R+
Sbjct: 645 PDVLTYNTVIYGLIKENRVNYAFWLFHQMK-KVIYPDYVTLCTLLPGVIKDGRIEDAFRV 703
Query: 68 VKQ-MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
K+ + +G + + L+ G + + E + +C +++ + LV +
Sbjct: 704 AKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLC 763
Query: 127 RCLDPHKAFELLIRFMEREPLTQKL-VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ A+ + ++ + +T L N+L+ L + A + KM + G P+
Sbjct: 764 KHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDV 823
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-DVEGDRYLN 244
T++ + L + E + + + RG KP T+ +++ L K+ D D Y +
Sbjct: 824 FTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYD 883
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D +Y +ID K+ ++ A + EM D PN +N L++G K
Sbjct: 884 LMSGD-FSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQG 942
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLC---------------------------- 336
+V EL +++ G +PD +++ M+DCLC
Sbjct: 943 DVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYN 1002
Query: 337 -------RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
R+ R E+AL EM G+ P+ TYN LI +L G V + ++++++Q
Sbjct: 1003 LMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLK 1062
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+ P+++T+NALI+ ++A + M+ G RP+ +++ L
Sbjct: 1063 GLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 119/532 (22%), Positives = 220/532 (41%), Gaps = 42/532 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ + Y ID KS A F++M + P+ N ++ + G ++E
Sbjct: 431 LGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEE 490
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ G AP+ TY IL+ + A RV + ++L M+E P + SL+
Sbjct: 491 AKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLID 550
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+++ +A+++ R E + + NTLL L EA A+ + M P
Sbjct: 551 TLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPP 610
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ +F+ + CL +++ +L + P TY ++ L K R V +L
Sbjct: 611 NTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENR-VNYAFWL 669
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE---------------------MR 282
H K + + + ++ K ++ A + +E +
Sbjct: 670 FHQMKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILI 729
Query: 283 DRDIAPNLVTFNTLISGH-CKDAEVHKTRELLVMLLECGFKPDKF--------------- 326
+ +I +++ +L+ C+D V L+ L + G D +
Sbjct: 730 EAEIGQSILFAESLVCNTICEDDSV--LIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPS 787
Query: 327 --TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
+NS+ID L +A E A +M G P+ TYN+ + +L G + L++
Sbjct: 788 LEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYE 847
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+M P+ T N +I + N ++KA ++ +++ P ++Y LI L+K G
Sbjct: 848 EMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLG 907
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
R +EAKQ F M GC P+ N+++ +QG E A ++ + + GI
Sbjct: 908 RLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGI 959
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 149/317 (47%)
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T +Y + L + + + + K+ +K +TYL + + LY G E L
Sbjct: 122 TETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALE 181
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K V N SY +I K A ++ R M I P+L T++ L+ K
Sbjct: 182 KMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRR 241
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ LL + G +P+ +TF I L RA + ++A L M + G P+ +TY
Sbjct: 242 DIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYT 301
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI +LC G + + LF KM+A PD T+ L+ F ++ ++ + M
Sbjct: 302 VLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEAD 361
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G PD +++ LI AL K G+ DEA T M++ G P+ +T N ++ L++ R +EA
Sbjct: 362 GYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEA 421
Query: 485 HDIVKTSKERGISFKSF 501
++ + + G+ ++
Sbjct: 422 LELFNSMESLGLETTAY 438
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 8/236 (3%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G P+T +N VI LVKSNS+D A + + P +TY LI G+ ++G ++
Sbjct: 851 FRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLE 910
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA + ++M G PN Y IL++GF V + M + + P+ + +V
Sbjct: 911 EAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMV 970
Query: 123 H---GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGD 178
V + D FE L + L LVC N ++ L + EA ++ +M +
Sbjct: 971 DCLCMVGKVDDALHYFEEL----KLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRN 1026
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
RG P+ T++ + L + E + + +G++P TY L+ +G
Sbjct: 1027 RGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSG 1082
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P + Y+ ++D L +D A F+++ + PD YN++I+G+ R V+EA
Sbjct: 958 GIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEA 1017
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M G P++YTY LI A V E ++ E ++ + + PN T +L+ G
Sbjct: 1018 LSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRG 1077
Query: 125 VFRCLDPHKAFELLIRFM 142
+P +A+ + + M
Sbjct: 1078 HSMSGNPDRAYAVYKKMM 1095
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 94/188 (50%), Gaps = 8/188 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ LYN +++ K ++ A F++M + +PD +Y+I++ +C +G VD+A
Sbjct: 923 GCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDA 982
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV-- 122
L ++++ G P++ Y ++I+G ++RV E + + M+ R + P+ T +L+
Sbjct: 983 LHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILN 1042
Query: 123 HGVFRCLDPHKAF--ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
G+ ++ EL ++ +E T N L+ S + A A+ +KM G
Sbjct: 1043 LGIAGMVEEAGKMYEELQLKGLEPNVFTY----NALIRGHSMSGNPDRAYAVYKKMMVGG 1098
Query: 181 YLPESSTF 188
P + TF
Sbjct: 1099 CRPNTGTF 1106
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 93/217 (42%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP+ Y +ID L+K ++ A F++M C P+ YNIL++G + G V+ A
Sbjct: 890 SPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACE 949
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L ++M G P++ +Y+I++D C +V + E +K + P+ +++G+
Sbjct: 950 LFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLG 1009
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
R +A L R N L+ L M EA + ++ +G P
Sbjct: 1010 RSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVF 1069
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
T++ + + + + + G +P T+
Sbjct: 1070 TYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTF 1106
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN +I+ L +S ++ A F +M PD +TYN LI + G+V+EA
Sbjct: 993 GLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEA 1052
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
++ ++++ G PNV+TY LI G + + V + M PN T L
Sbjct: 1053 GKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 216/467 (46%), Gaps = 4/467 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+T + AL + D A + M+ C PD Y +IH +C G V EA
Sbjct: 171 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 230
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L+ +M +G A +V T+ ++ G C RV E R+++ M + P T L+ G+
Sbjct: 231 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 290
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
R +A +L R P ++ NT++ +EA + MG +G P++
Sbjct: 291 CRVRQADEARAMLGRV----PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 346
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + L + +L K+G P TY +++ + K G + L
Sbjct: 347 HTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEE 406
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ L N YN +I CK MD A + +EMR + P++ ++NT+I C + +
Sbjct: 407 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 466
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + + LLE G + T+N++I L R R++DA+ EM+ G + ++YN
Sbjct: 467 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNG 526
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI+++C G+V RSL L ++M I P+ ++N LI C+ ++ A + ML G
Sbjct: 527 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 586
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
L PD +Y+ LI L K G A + +PD T N+++
Sbjct: 587 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 222/489 (45%), Gaps = 11/489 (2%)
Query: 5 GISPSTRLYNAVIDALVKSN-SIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G+ PS R YN V+ L +++ D L + + D+ P FT+ + +CR+G DE
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADE 193
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L++ M G P+ Y +I C+ V E +L M + T +V
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ +A L+ R M + + + LL L A EA A+L G +P
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML------GRVP 307
Query: 184 ESSTFDYTVT---CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
E + + CL G L E + +T +G +P TY +LM L K GR
Sbjct: 308 ELNVVLFNTVIGGCLAEG-KLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAV 366
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
R L + K NV +Y +V+ FCK M D + EM + + N +N +I
Sbjct: 367 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 426
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CKD + + L+ + G PD ++N++I LC + E+A ++E GV N
Sbjct: 427 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 486
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITYN +I +L G ++RL ++M S D+ ++N LI++ C+ ++++
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G++P+N SY+ LI L K R +A + M G PD T N ++ L + G
Sbjct: 547 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW 606
Query: 481 FEEAHDIVK 489
A ++++
Sbjct: 607 MHAALNLLE 615
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 201/442 (45%), Gaps = 33/442 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P LY VI AL + A +M + C D T++ ++ G+C +G V EA
Sbjct: 205 GCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREA 264
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAK------------------------------ 94
RLV +M G P V TY L+ G C +
Sbjct: 265 ARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAE 324
Query: 95 -RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC 153
++AE + E M + P+ T L+HG+ + A LL R ME++ +V
Sbjct: 325 GKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLL-REMEKKGFAPNVVT 383
Query: 154 NTL-LYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
T+ L+ N M + A+L +M +G S ++ + L ++E G++
Sbjct: 384 YTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMR 443
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+G P +Y ++ L + E + ++ ++ +V+N +YN +I +
Sbjct: 444 SQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQ 503
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + +EM + ++V++N LI CKD V ++ LL + E G KP+ ++N +I
Sbjct: 504 DAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILI 563
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
LC+ R DAL+ +M+ G+ P+ +TYN LI LC +G + +L L +K+ + +
Sbjct: 564 SELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVH 623
Query: 393 PDIYTFNALIQSFCRMNKIEKA 414
PDI T+N LI C++ ++ A
Sbjct: 624 PDIITYNILISWHCKVRLLDDA 645
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 135/300 (45%), Gaps = 14/300 (4%)
Query: 207 ILDTFIKR-GVKPRFSTYLLLMEALYKAGRDVEGDR---YLNHVFKDRLVSNVNSYNMVI 262
+LD +R GV+P F +Y +++ L +A D D Y V +DR+ ++ +
Sbjct: 125 LLDQLPRRFGVQPSFRSYNVVLSVLARA--DCHADALALYRRMVHRDRVPPTTFTFGVAA 182
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
C++ D A + R M P+ V + T+I C V + LL +L G
Sbjct: 183 RALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCA 242
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI--GDVARSL 380
D TF+ ++ +C R +A + M+ G P +TY L++ LC + D AR+
Sbjct: 243 ADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA- 301
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
M ++ FN +I K+ +A + + +M G +PD +YS L+ L
Sbjct: 302 -----MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
K GR A + ME+ G P+ T ++L + + G +++ +++ +G++ S
Sbjct: 357 CKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 115/275 (41%), Gaps = 35/275 (12%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G++ +++ YN +I AL K +D A Q+M C PD +YN +I+ +C
Sbjct: 407 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 466
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
++EA + + + G N TY +I R + R+ + M
Sbjct: 467 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM-------------- 512
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++HG LD ++ + N L+ + + + +L +M ++G
Sbjct: 513 ILHGC--SLD-------VVSY------------NGLIKAMCKDGNVDRSLVLLEEMAEKG 551
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P + +++ ++ L + + + + +G+ P TY L+ L K G
Sbjct: 552 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 611
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT 275
L + + + ++ +YN++I CKV ++D A
Sbjct: 612 NLLEKLHNENVHPDIITYNILISWHCKVRLLDDAA 646
>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
Length = 649
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 239/469 (50%), Gaps = 16/469 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I+ + ++P T YN V+ L + + A +M ++C P+ T+ I C+ G+
Sbjct: 181 IASMPVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGL 240
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM--KERNVCPNEATV 118
+D A++L+ QM G P+V Y+ LI+GF V + +L M K VC N A
Sbjct: 241 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAA-- 298
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
+ G+ EL+ + + + + L+ L N++ A +L +M
Sbjct: 299 ---LKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEK 355
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P++ ++ + L +++ +L++ + KP + +++ +A R +
Sbjct: 356 YGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHD 412
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ +F+D ++N++ID C+ +++ AT++ +M P++VT+++L++
Sbjct: 413 ASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLN 472
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G + V +L + C KPD F++N+++ LCRA R+EDA + ++EMV PP
Sbjct: 473 GFSEQGLVEVAIQLF-RSMPC--KPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPP 529
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N +T+NILI SLC G V R++ + ++M +PDI+T+NALI F +++ A K
Sbjct: 530 NEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKL- 588
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ T+ +PD SY++ +K L ++ R+ +A++ M +N C P+ T
Sbjct: 589 --LSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVT 635
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 218/449 (48%), Gaps = 13/449 (2%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
++N L+ G CR G + +A R++ G A NV TYT LIDG+C + R+ + R++ M
Sbjct: 126 SHNTLVAGYCRDGRLADAERVLGAARATG-AANVVTYTALIDGYCRSGRLDDALRLIASM 184
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
V P+ T +++ G+ +A EL+ + ++ T + N +
Sbjct: 185 P---VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLL 241
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
A +L +M G P+ + + +++ +L+T + KP Y
Sbjct: 242 DRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAA 298
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ L A R + + + + N +++M+I C+ N++D A E+ +M
Sbjct: 299 LKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGC 358
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P+ V +N +I+ + V LL ++ KPD FN+++ CRA R+ DA +
Sbjct: 359 EPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASE 415
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
+++M P +T+NILI LC G V + ++F++M R +PDI T+++L+ F
Sbjct: 416 LIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFS 475
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+E A + F SM +PD FSY+A++K L ++ R+++A + M C P+
Sbjct: 476 EQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEV 532
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERG 495
T N+++ +L Q+G + A ++++ G
Sbjct: 533 TFNILINSLCQKGLVDRAIEVLEQMPNYG 561
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 168/358 (46%), Gaps = 13/358 (3%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+T YNA + L + + +M C P+ T+++LI +C+ +VD A+ +
Sbjct: 290 PNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEV 349
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVHGVF 126
++QME G P+ Y I+I+ RV + R+L M VC P+ +++ G
Sbjct: 350 LEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSM----VCKPDALGFNAVLKGFC 405
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
R H A EL+ + + ++ N L+ L N + + A + +M P+
Sbjct: 406 RAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIV 465
Query: 187 TFDYTVTCLVTGLDLNETCGI-LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + L+ G + + F KP +Y +++ L +A R + +
Sbjct: 466 TY----SSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAE 521
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ N ++N++I+ C+ ++DRA E+ +M + P++ T+N LI+G +
Sbjct: 522 MVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGR 581
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ +LL + KPD ++NS + LCRA R++DA + ++EM+ PN +T+
Sbjct: 582 LDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 636
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 176/406 (43%), Gaps = 11/406 (2%)
Query: 85 ILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMER 144
ILI C +R+A+ RVL+ +K + + +LV G C D A + R
Sbjct: 95 ILIKKLCATRRLADAERVLDALKAAAA-ADAVSHNTLVAGY--CRDGRLADAERVLGAAR 151
Query: 145 EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNET 204
+V T L + + LR + P++ T++ + L E
Sbjct: 152 ATGAANVVTYTAL--IDGYCRSGRLDDALRLIASMPVAPDTYTYNTVLKGLCIAKKWEEA 209
Query: 205 CGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
++ I+ P T+ + + + G + L+ + + +V Y+ +I+
Sbjct: 210 EELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLING 269
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
F + +D+A ++ M + PN V +N + G C EL+ ++ G P+
Sbjct: 270 FSEQGHVDQALDLLNTMLCK---PNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPN 326
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
+ TF+ +I LC+ + + A++ L +M ++G P+T+ YNI+I SL G V +LRL
Sbjct: 327 EATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLN 386
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
M PD FNA+++ FCR + A + M +++ LI L ++G
Sbjct: 387 SMVC---KPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNG 443
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+ A Q F M + C PD T + +L +QG E A + ++
Sbjct: 444 LVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRS 489
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 32/148 (21%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YNAV+ L ++ + A +M C P+ T+NILI+ +C+ G+VD A+ +
Sbjct: 494 PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEV 553
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK-------------------- 107
++QM G P+++TY LI+GF R+ + ++L M
Sbjct: 554 LEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCKPDAISYNSTLKGLCRAER 613
Query: 108 -----------ERNVC-PNEATVRSLVH 123
RN C PNE T + H
Sbjct: 614 WQDAEELVAEMLRNKCTPNEVTFKYANH 641
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 216/467 (46%), Gaps = 4/467 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+T + AL + D A + M+ C PD Y +IH +C G V EA
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L+ +M +G A +V T+ ++ G C RV E R+++ M + P T L+ G+
Sbjct: 215 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
R +A +L R P ++ NT++ +EA + MG +G P++
Sbjct: 275 CRVRQADEARAMLGRV----PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 330
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + L + +L K+G P TY +++ + K G + L
Sbjct: 331 HTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEE 390
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ L N YN +I CK MD A + +EMR + P++ ++NT+I C + +
Sbjct: 391 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 450
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + + LLE G + T+N++I L R R++DA+ EM+ G + ++YN
Sbjct: 451 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNG 510
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI+++C G+V RSL L ++M I P+ ++N LI C+ ++ A + ML G
Sbjct: 511 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 570
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
L PD +Y+ LI L K G A + +PD T N+++
Sbjct: 571 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 617
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/454 (27%), Positives = 205/454 (45%), Gaps = 10/454 (2%)
Query: 39 DQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE 98
D+ P FT+ + +CR+G DEAL L++ M G P+ Y +I C+ V E
Sbjct: 153 DRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTE 212
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
+L M + T +V G+ +A L+ R M + + + LL
Sbjct: 213 AATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQ 272
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT---CLVTGLDLNETCGILDTFIKRG 215
L A EA A+L G +PE + + CL G L E + +T +G
Sbjct: 273 GLCRVRQADEARAML------GRVPELNVVLFNTVIGGCLAEG-KLAEATELYETMGLKG 325
Query: 216 VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT 275
+P TY +LM L K GR R L + K NV +Y +V+ FCK M D
Sbjct: 326 CQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTR 385
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
+ EM + + N +N +I CKD + + L+ + G PD ++N++I L
Sbjct: 386 ALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHL 445
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
C + E+A ++E GV N ITYN +I +L G ++RL ++M S D+
Sbjct: 446 CNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDV 505
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
++N LI++ C+ ++++ M G++P+N SY+ LI L K R +A +
Sbjct: 506 VSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQ 565
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
M G PD T N ++ L + G A ++++
Sbjct: 566 MLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLE 599
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 201/442 (45%), Gaps = 33/442 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P LY VI AL + A +M + C D T++ ++ G+C +G V EA
Sbjct: 189 GCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREA 248
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAK------------------------------ 94
RLV +M G P V TY L+ G C +
Sbjct: 249 ARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAE 308
Query: 95 -RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC 153
++AE + E M + P+ T L+HG+ + A LL R ME++ +V
Sbjct: 309 GKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLL-REMEKKGFAPNVVT 367
Query: 154 NTL-LYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
T+ L+ N M + A+L +M +G S ++ + L ++E G++
Sbjct: 368 YTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMR 427
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+G P +Y ++ L + E + ++ ++ +V+N +YN +I +
Sbjct: 428 SQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQ 487
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + +EM + ++V++N LI CKD V ++ LL + E G KP+ ++N +I
Sbjct: 488 DAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILI 547
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
LC+ R DAL+ +M+ G+ P+ +TYN LI LC +G + +L L +K+ + +
Sbjct: 548 SELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVH 607
Query: 393 PDIYTFNALIQSFCRMNKIEKA 414
PDI T+N LI C++ ++ A
Sbjct: 608 PDIITYNILISWHCKVRLLDDA 629
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 117/285 (41%), Gaps = 31/285 (10%)
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
Y V +DR+ ++ + C++ D A + R M P+ V + T+I C
Sbjct: 146 YRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALC 205
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
V + LL +L G D TF+ ++ +C R +A + M+ G P +
Sbjct: 206 DQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVM 265
Query: 362 TYNILIRSLC-------------------------------AIGDVARSLRLFQKMQADR 390
TY L++ LC A G +A + L++ M
Sbjct: 266 TYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKG 325
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
PD +T++ L+ C++ +I A + M G P+ +Y+ ++ + K+G +D+ +
Sbjct: 326 CQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTR 385
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
M G +S N ++ L + GR +EA +++ + +G
Sbjct: 386 ALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 430
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 115/275 (41%), Gaps = 35/275 (12%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G++ +++ YN +I AL K +D A Q+M C PD +YN +I+ +C
Sbjct: 391 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 450
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
++EA + + + G N TY +I R + R+ + M
Sbjct: 451 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM-------------- 496
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++HG LD ++ + N L+ + + + +L +M ++G
Sbjct: 497 ILHGC--SLD-------VVSY------------NGLIKAMCKDGNVDRSLVLLEEMAEKG 535
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P + +++ ++ L + + + + +G+ P TY L+ L K G
Sbjct: 536 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 595
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT 275
L + + + ++ +YN++I CKV ++D A
Sbjct: 596 NLLEKLHNENVHPDIITYNILISWHCKVRLLDDAA 630
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 224/474 (47%), Gaps = 39/474 (8%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYT 82
+++IDL F M + P +N L+ I ++ D + L K+ME LG ++YT
Sbjct: 67 NDAIDL----FSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122
Query: 83 YTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFM 142
+ I+I+ FC +V+ +L M + P+ T+ SLV+G R
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR--------------- 167
Query: 143 EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
+ S+A +++ KM + GY P+ ++ + L +N
Sbjct: 168 --------------------RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
+ ++G++P TY L+ L + R + R L+ + K ++ NV +Y+ ++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
D F K + A E+ EM I P++VT+++LI+G C + + ++ +++ G
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
D ++N++I+ C+A R ED + EM + G+ NT+TYN LI+ GDV ++
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
F +M ISPDI+T+N L+ C ++EKA F M + D +Y+ +I+ + K
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+G+ +EA F S+ G PD T ++ L +G E + K+ G+
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 209/446 (46%), Gaps = 10/446 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ A+VK D+ ++M V + D +T+NI+I+ C V AL +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P+ T L++GFC RV++ +++ M E P+ +++ + +
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLPESS 186
+ AF+ + +ER+ + +V T L L N+S S+AA +L M + P
Sbjct: 203 TKRVNDAFDFF-KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + V + E + + ++ + P TY L+ L R E ++ + +
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+++V SYN +I+ FCK ++ ++ REM R + N VT+NTLI G + +V
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
K +E + G PD +T+N ++ LC E AL +M + + + +TY +
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
IR +C G V + LF + + PDI T+ ++ C + + E + M GL
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Query: 427 RPDNFSYS--------ALIKALIKSG 444
++ + S LIK ++ G
Sbjct: 502 MKNDCTLSDGDITLSAELIKKMLSCG 527
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 132/280 (47%), Gaps = 35/280 (12%)
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+++ ++N+VI+CFC + A I +M P+ VT +L++G C+ V L
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD-------------------------- 346
+ ++E G+KPD +N++ID LC+ R DA D
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 347 ---------CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
LS+M++ + PN ITY+ L+ + G V + LF++M I PDI T
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+++LI C ++I++A + F M++ G D SY+ LI K+ R ++ + F M
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
Q G ++ T N +++ Q G ++A + GIS
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 153/352 (43%), Gaps = 37/352 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P YNA+ID+L K+ ++ A+ F+++ +P+ TY L++G+C +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A RL+ M PNV TY+ L+D F +V E + E M ++ P+ T SL++
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 124 GVFRCL-----DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
G+ CL + ++ F+L++ + L + NTL+ + + R+M
Sbjct: 304 GL--CLHDRIDEANQMFDLMV---SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
RG + + T++ + D+++ G+ P TY +L+ L G +
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ K + ++ +Y VI CK ++ A + + + + P++VT+ T++S
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Query: 299 GHC---------------------------KDAEVHKTRELLVMLLECGFKP 323
G C D ++ + EL+ +L CG+ P
Sbjct: 479 GLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAP 530
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 85/175 (48%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P FN ++ + + +++ + +M G+ + T+NI+I C V+ +L +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
KM PD T +L+ FCR N++ A M+ +G +PD +Y+A+I +L K
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ R ++A F +E+ G P+ T ++ L R+ +A ++ ++ I+
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%)
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
R + DA+D S+MV+ P+ + +N L+ ++ + + L +KM+ I D+Y
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
TFN +I FC ++ A ML LG PD + +L+ + R +A M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ G PD N I+++L + R +A D K + +GI
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI 221
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F GISP YN ++ L + ++ A + F+ M + D TY +I G+C+ G
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
V+EA L + G P++ TYT ++ G C + EV + MK+ + N+ T+
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 213/457 (46%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P +N ++DA ++ ++ A M KP TYN ++ G+ R G D+A +
Sbjct: 192 PDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREV 251
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ M+ G AP+V ++ +LI GFC A + E R + M+ R V P+ + L+ R
Sbjct: 252 FRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTR 311
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ A E L E + ++ ++ + EA + +M G LP+ T
Sbjct: 312 RGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVT 371
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + L L++ +L+ +RGV P T+ L+ + G + ++ + +
Sbjct: 372 YNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTIS 431
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
RL ++ +YN +ID C+ + +A E+ +M R+I PN VT++ LI HC+ +V
Sbjct: 432 DQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVD 491
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
L ++ G P+ T+NS+I CR+ L +M V P+ ITYN LI
Sbjct: 492 NAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLI 551
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
G + + L + M+ + + PD T+N +I F +++A+ + M G+
Sbjct: 552 HGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIE 611
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
PD ++Y ++I + +G ++ Q M Q G PD
Sbjct: 612 PDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 208/452 (46%), Gaps = 2/452 (0%)
Query: 46 FTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEI 105
+T NI++H C+ E ++ +ME P+V T+ +++D A V +++
Sbjct: 160 YTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDS 219
Query: 106 MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNS 164
M + + P T S++ G+ R KA E+ R M+ + + N L+
Sbjct: 220 MVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVF-RAMDACGVAPDVRSFNMLIGGFCRAG 278
Query: 165 MASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYL 224
EA ++M R P+ +F + +++ L + G+ P Y
Sbjct: 279 ELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYT 338
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
+++ +AG +E R + + + +V +YN +++ CK + A E+ EM++R
Sbjct: 339 MVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKER 398
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
+ P+L TF TLI G+C+D + K + + + +PD T+N++ID +CR A
Sbjct: 399 GVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKA 458
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
+ +M + PN +TY+ILI S C G V + +M I P+I T+N++I+
Sbjct: 459 NELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKG 518
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+CR + K ++ M + PD +Y+ LI +K G+ EA ME PD
Sbjct: 519 YCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPD 578
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ T N+I+ G +EA + K RGI
Sbjct: 579 AVTYNMIISGFSVHGNMQEADWVYKKMGARGI 610
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 201/426 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P YN+V+ L+++ D A F+ M PD ++N+LI G CR G ++EA
Sbjct: 224 GIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEA 283
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LR K+M G P+V +++ LI F + L M+E + P+ ++ G
Sbjct: 284 LRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGG 343
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R +A + + L + NTLL L S+A +L +M +RG P+
Sbjct: 344 FCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPD 403
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + ++ + DT + ++P TY L++ + + G + + +
Sbjct: 404 LCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWD 463
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N +Y+++ID C+ +D A EM ++ I PN++T+N++I G+C+
Sbjct: 464 DMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSG 523
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V K ++ L + PD T+N++I + + +A + L M V P+ +TYN
Sbjct: 524 NVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYN 583
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++I G++ + +++KM A I PD YT+ ++I +K+ + ML
Sbjct: 584 MIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQK 643
Query: 425 GLRPDN 430
GL PD+
Sbjct: 644 GLAPDD 649
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 190/411 (46%)
Query: 79 NVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELL 138
N YT I++ +C + EV V+ M++R V P+ T +V FR D A L+
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217
Query: 139 IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTG 198
+ + + N++L L N +A + R M G P+ +F+ +
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277
Query: 199 LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY 258
+L E R V P ++ L+ + G YL + + L+ + Y
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIY 337
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
MVI FC+ +M A + EM P++VT+NTL++G CK+ + ELL + E
Sbjct: 338 TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKE 397
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
G PD TF ++I CR E AL + + + P+ +TYN LI +C GD+ +
Sbjct: 398 RGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGK 457
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+ L+ M + I P+ T++ LI S C +++ A M+ G+ P+ +Y+++IK
Sbjct: 458 ANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIK 517
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+SG + +Q M + PD T N ++ V++G+ EA +++K
Sbjct: 518 GYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLK 568
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 193/432 (44%)
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +V + P + +LI + +++ E F ++ + V A +L+
Sbjct: 74 LDIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAA 133
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R PH + + N +++ E ++ +M R P+
Sbjct: 134 LSRAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPD 193
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T + V D+ ++D+ + +G+KP TY +++ L + GR +
Sbjct: 194 VVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFR 253
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +V S+NM+I FC+ ++ A +EMR R + P++V+F+ LI +
Sbjct: 254 AMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRG 313
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E+ E L + E G PD + +I CRA +AL EMV +G P+ +TYN
Sbjct: 314 EMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYN 373
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ LC ++ + L +M+ + PD+ TF LI +CR IEKA + F ++
Sbjct: 374 TLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQ 433
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
LRPD +Y+ LI + + G +A + + M P+ T ++++++ ++G+ + A
Sbjct: 434 RLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNA 493
Query: 485 HDIVKTSKERGI 496
+ +GI
Sbjct: 494 FAFLDEMVNKGI 505
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 2/219 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS + P YN +ID + + + A + M + P+ TY+ILI C G
Sbjct: 430 ISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQ 489
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD A + +M G PN+ TY +I G+C + V++ + L M+ V P+ T +
Sbjct: 490 VDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNT 549
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDR 179
L+HG + H+AF LL + ME E + V N ++ S + EA + +KMG R
Sbjct: 550 LIHGYVKEGKMHEAFNLL-KIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGAR 608
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
G P+ T+ + V + ++ + D +++G+ P
Sbjct: 609 GIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 75/139 (53%)
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
NT T NI++ S C + +M+ + PD+ T N ++ + R +E A
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
SM++ G++P +Y++++K L+++GR+D+A++ F +M+ G PD + N+++ +
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277
Query: 479 GRFEEAHDIVKTSKERGIS 497
G EEA K + R ++
Sbjct: 278 GELEEALRFYKEMRGRRVT 296
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 221/451 (49%), Gaps = 9/451 (1%)
Query: 51 LIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
++ +G + EA+ +V +M G PN T +I V + E M R
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200
Query: 111 VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA 170
V P+ + R +V + + +A + L +ER + ++ R S + A
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLL 226
R++ D G P F TC++ GL + + +L+ + +G KP T+ L
Sbjct: 261 WYFRRLVDMGLEPNLINF----TCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSL 316
Query: 227 MEALYKAGRDVEGDR-YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
++ L K G + R +L V + NV +Y +I +C+ + ++RA + M+++
Sbjct: 317 IDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQG 376
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
+ PN T+ TLI GHCK + +L+ ++ GF P+ T+N++++ LC+ R ++A
Sbjct: 377 LVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAY 436
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
L + + G+ P+ TYNIL+ C ++ ++L LF KM I PDI+++ LI F
Sbjct: 437 KMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVF 496
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
CR N+++++E F + +G+ P N +Y+++I + G A + F + +GC PDS
Sbjct: 497 CRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDS 556
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
T I+ L +Q + +EA + + E+G+
Sbjct: 557 ITYGAIISGLCKQSKRDEARSLYDSMIEKGL 587
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 200/464 (43%), Gaps = 44/464 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+TR N +I + ++ A L F++M V +PD +Y +++ C+IG + EA
Sbjct: 165 GLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEA 224
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + M G+ + T+T++I F + + + PN ++ G
Sbjct: 225 DKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEG 284
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AFE+L +M +G+ P
Sbjct: 285 LCKRGSIKQAFEML-----------------------------------EEMVGKGWKPN 309
Query: 185 SSTFDYTVTCLVTGL-DLNETCGILDTFIK----RGVKPRFSTYLLLMEALYKAGRDVEG 239
YT T L+ GL T F+K KP TY ++ + +
Sbjct: 310 V----YTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRA 365
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ L+ + + LV N N+Y +ID CK +RA ++ M +PNL T+N +++G
Sbjct: 366 EMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNG 425
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK V + ++L + G KPDKFT+N ++ C+ AL ++M++ G+ P+
Sbjct: 426 LCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPD 485
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+Y LI C + S F++ I P T+ ++I +CR + A K F
Sbjct: 486 IHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFH 545
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ G PD+ +Y A+I L K + DEA+ + SM + G P
Sbjct: 546 RLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVP 589
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 164/369 (44%), Gaps = 36/369 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ + +I+ L K SI A+ ++M KP+ +T+ LI G+C+ G ++
Sbjct: 269 MGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEK 328
Query: 64 ALRL-VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A RL +K + + PNV TYT +I G+C ++ +L MKE+ + PN T +L+
Sbjct: 329 AFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLI 388
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G + + +A++L+ N M+SE G+
Sbjct: 389 DGHCKAGNFERAYDLM------------------------NLMSSE-----------GFS 413
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T++ V L + E +L+ + G+KP TY +LM K +
Sbjct: 414 PNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALAL 473
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
N + K + +++SY +I FC+ N M + E I P T+ ++I G+C+
Sbjct: 474 FNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCR 533
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + L + G PD T+ ++I LC+ + ++A M+E G+ P +T
Sbjct: 534 EGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVT 593
Query: 363 YNILIRSLC 371
L C
Sbjct: 594 RITLAYEYC 602
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 155/336 (46%), Gaps = 38/336 (11%)
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL-DTFIKRGVKPRFSTYLLL 226
EA ++ +M ++G +P + T ++ + + + + L E +L + RGV+P +Y ++
Sbjct: 153 EAVEMVIEMHNQGLVPNTRTLNWIIK-VTSEMGLVEYAELLFEEMCVRGVQPDSISYRVM 211
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ K G +E D++L+ + + V + ++ ++I F RA R + D +
Sbjct: 212 VVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGL 271
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PNL+ F MI+ LC+ + A +
Sbjct: 272 EPNLIN-----------------------------------FTCMIEGLCKRGSIKQAFE 296
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM-QADRISPDIYTFNALIQSF 405
L EMV G PN T+ LI LC G ++ RLF K+ +++ P++ T+ A+I +
Sbjct: 297 MLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGY 356
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
CR +K+ +AE M GL P+ +Y+ LI K+G F+ A M G +P+
Sbjct: 357 CREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNL 416
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
T N I+ L ++GR +EA+ +++ + G+ F
Sbjct: 417 CTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKF 452
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 159/608 (26%), Positives = 256/608 (42%), Gaps = 114/608 (18%)
Query: 4 LGISPSTRLYNAVIDALVKSN----SIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
LG+ P T YN V+ L + + ++DL + ++ C P+ TYN +IHG+ R G
Sbjct: 184 LGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSG--GCSPNVVTYNTVIHGLFREG 241
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
V +A L +M G P+V TYT +ID C A+ + + VL M PN+ T
Sbjct: 242 EVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYN 301
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV-CNTLLYRLSNNSMASEAAAILRKMGD 178
++HG + K + R M + L +V CN+ + L + + EAA M
Sbjct: 302 CMIHG-YSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAA 360
Query: 179 RGYLPESSTFDY------TVTCLVTGLDL-----------------------------NE 203
+G+ P T+ T C V L+L +E
Sbjct: 361 KGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDE 420
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
T I ++GV P TY +++ A + GR + N + L Y+ +I
Sbjct: 421 TMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQ 480
Query: 264 CFCKVNMMDRATEICREMRDRDIA-PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
FC + +A E+ EM R I PN+V FN++I+ CK+ V + ++ ++ G +
Sbjct: 481 GFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGER 540
Query: 323 PDKFTFNSMIDCL-----------------------------------CRAHRFEDALDC 347
PD TFNS+ID CR R +D L
Sbjct: 541 PDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLIL 600
Query: 348 LSEMVEWGVPPNTITYNILIRSL---------------------------CAI--GDVAR 378
EM+ GV P TITY I++ L C I G + R
Sbjct: 601 FGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCR 660
Query: 379 ------SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
++ +F+K+ A + +I N +I + ++ K E+A++ F S+ GL P+ +
Sbjct: 661 NNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNAST 720
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y +IK L+K G +EA F ME++GC P S N I+ L+++G +A + +
Sbjct: 721 YGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVD 780
Query: 493 ERGISFKS 500
+ IS ++
Sbjct: 781 GKRISLEA 788
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 223/481 (46%), Gaps = 9/481 (1%)
Query: 25 SIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM--EGLGYAPNVYT 82
S D+ L +M +PD +YN ++ +C AL L+ M + G +PNV T
Sbjct: 170 SDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVT 229
Query: 83 YTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFM 142
Y +I G V++ + M ++ V P+ T S++ + + KA EL++R M
Sbjct: 230 YNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKA-ELVLRQM 288
Query: 143 EREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
K+ N +++ S + E A + R+M +G +P T + ++ L
Sbjct: 289 ISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKS 348
Query: 202 NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
E D+ +G KP TY +L+ G V+ N + + +V++ +N+V
Sbjct: 349 KEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIV 408
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
ID + K MMD I +M+++ + P+ T+ +I+ + + + ++ G
Sbjct: 409 IDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGL 468
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP-PNTITYNILIRSLCAIGDVARSL 380
KP+ ++S+I C A + +SEM+ G+P PN + +N +I SLC G V +
Sbjct: 469 KPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAH 528
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
+F + PD+ TFN+LI + + KIEKA +M++ G+ PD SY+ LI
Sbjct: 529 DIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGY 588
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA----HDIVKTSKERGI 496
++GR D+ F M G P + T +IL L GR A H+++++ I
Sbjct: 589 CRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDI 648
Query: 497 S 497
S
Sbjct: 649 S 649
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 181/423 (42%), Gaps = 39/423 (9%)
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
E + R P T L+ R P F L RF++ +V + LL L +
Sbjct: 108 EEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHA 167
Query: 164 SMASEAA-AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR--GVKPRF 220
+ + +L +M + G P++ +++ V L +L T +K+ G P
Sbjct: 168 KRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNV 227
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY ++ L++ G + + + + +V +V +Y +ID CK MD+A + R+
Sbjct: 228 VTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQ 287
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M PN VT+N +I G+ + +T + + G P+ T NS + LC+ +
Sbjct: 288 MISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGK 347
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIR----------------SLCAIGDVA------- 377
++A + M G PN +TY++L+ S+ G VA
Sbjct: 348 SKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNI 407
Query: 378 ------------RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
++ +F +MQ + PD T+ +I +F RM ++ A F M+ +G
Sbjct: 408 VIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMG 467
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC-NPDSYTSNLILETLVQQGRFEEA 484
L+P+ Y +LI+ G +AK+ M G P+ N I+ +L ++GR EA
Sbjct: 468 LKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEA 527
Query: 485 HDI 487
HDI
Sbjct: 528 HDI 530
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/483 (21%), Positives = 209/483 (43%), Gaps = 7/483 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ N+ + +L K A F M+ KP+ TY++L+HG G +
Sbjct: 327 GLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDM 386
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L MEG G + + I+ID + + E + M+E+ V P+ T ++
Sbjct: 387 LNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAA 446
Query: 125 ---VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ R D F +I M +P + +V ++L+ + +A ++ +M RG
Sbjct: 447 FSRMGRLADAMDKFNQMIA-MGLKP--EGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGI 503
Query: 182 -LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P F+ + L + E I D I G +P T+ L++ G+ +
Sbjct: 504 PRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAF 563
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L+ + + +V SYN +ID +C+ +D + EM + + P +T+ ++ G
Sbjct: 564 GVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGL 623
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
D +++ ++E G D T ++ LCR + ++A+ ++ V N
Sbjct: 624 FNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNI 683
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
N +I ++ + + LF + A + P+ T+ +I++ + +E+A+ F
Sbjct: 684 AIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSL 743
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G P + + +I+ L++ G +A ++ + ++ T +L++ ++G+
Sbjct: 744 MEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGK 803
Query: 481 FEE 483
+ E
Sbjct: 804 YWE 806
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 228/502 (45%), Gaps = 8/502 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P +N++I ++N +D+A F +M + D +Y LI G+C G +DEA
Sbjct: 5 GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 64
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +M+ P+++ Y L+ G CNA+R E +L MKE P+ ++V
Sbjct: 65 VELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVD- 119
Query: 125 VFRCLD--PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
FRC + +A E+L E+ + C ++ S+A +L M RG
Sbjct: 120 -FRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCK 178
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T++ V +++ +L+ GV P TY LL+ G R
Sbjct: 179 PNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRL 238
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + D L+++ +YN +I+ CK D+A + + R I PN VTFN+LI+G CK
Sbjct: 239 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 298
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + L ++ G PD +T++S I+ LC+ ++ L + EM++ V P+T+
Sbjct: 299 SGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 358
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y I+I L + R + +M + +PD+ T+ ++++C ++ +AE M
Sbjct: 359 YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMS 418
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G+ D +Y+ L+ G+ D A M P+ +T ++L LV+ E
Sbjct: 419 KNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVE 478
Query: 483 EAHDIVKTSKERGISFKSFPGL 504
+ + + I GL
Sbjct: 479 DVLPLTPAGVWKAIELTDVFGL 500
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 133/542 (24%), Positives = 225/542 (41%), Gaps = 62/542 (11%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG PSTR Y AV+D + A Q+M P T +I+ C+ G + +
Sbjct: 105 LGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSD 164
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
ALR+++ M+ G PNV+TY L+ GFCN +V + +L M+ V P+ T L+
Sbjct: 165 ALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIR 224
Query: 124 GVFRCLDPH--KAFELLIRFMEREPL-TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
G +C+D H AF LL R ME + L + N L+ L + +A ++ + RG
Sbjct: 225 G--QCIDGHIESAFRLL-RLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 281
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P + TF+ + L + L+ + G P TY +E L K EG
Sbjct: 282 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 341
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
++ + + + + +Y +VI K EM P++VT+ T + +
Sbjct: 342 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAY 401
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C + +++ +L+ + + G D +N+++D + + A+ L +M PN
Sbjct: 402 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 461
Query: 361 ITYNILIRSLCAI----------------------------------------------- 373
TY IL+R L +
Sbjct: 462 FTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILE 521
Query: 374 -----GDVARSLRLFQKMQADRIS--PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
G + L M+ D IS DIYT AL+ FC+ + A SM+ G
Sbjct: 522 GFSEDGRTEEATSLVSLMKEDSISLNEDIYT--ALVTCFCKSKRYLDAWVLVCSMIQHGF 579
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P SY L+ LI G+ D+AK+ F++ +PD +I++ L+++G + + +
Sbjct: 580 IPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISRE 639
Query: 487 IV 488
++
Sbjct: 640 MI 641
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/488 (21%), Positives = 194/488 (39%), Gaps = 17/488 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YNA++ + A +M PD TYN+LI G C G ++ A
Sbjct: 176 GCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESA 235
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL++ MEG G + YTY LI+ C R + + + ++ R + PN T SL++G
Sbjct: 236 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLING 295
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A++ L + + ++ + L + E + + +M + P
Sbjct: 296 LCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPS 355
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + L+ + + G P TY M A GR E + L
Sbjct: 356 TVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLM 415
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI------- 297
+ K+ + + +YN ++D + D A I ++M PN T+ L+
Sbjct: 416 EMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 475
Query: 298 ----------SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
+G K E+ L ++ + F P+ T++S+++ R E+A
Sbjct: 476 LVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSL 535
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
+S M E + N Y L+ C + L M P + ++ L+
Sbjct: 536 VSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLIC 595
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ +KA++ F + PD + +I LIK G D +++ + +E+ C P T
Sbjct: 596 EGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQT 655
Query: 468 SNLILETL 475
++ E L
Sbjct: 656 YAMLTEEL 663
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 89/180 (49%), Gaps = 4/180 (2%)
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
++ G++PD +TFNS+I CR ++ + A D +M G + ++Y LI LC G
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+ ++ LF +M PD++ + AL++ C + E+ M LG RP +Y+A
Sbjct: 61 IDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
++ + + EA++ M + G P T ++ ++GR +A +++ K RG
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 219/471 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ YN ++D+ K + A QM C P+ TYN+L++G+ G +++A
Sbjct: 185 GIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQA 244
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+++M LG + YTY LI G+C ++ E R+ E M R P T ++++G
Sbjct: 245 KELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYG 304
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A +LL + + + + NTL+Y + EA + ++ RG +P
Sbjct: 305 LCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPS 364
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L DL+ + D IK G P T+ +L+ K G +
Sbjct: 365 VVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFD 424
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L + +Y I K+ +A + EM R P+L+T+N I G K
Sbjct: 425 EMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLG 484
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + EL+ +L G PD T+ S+I A A EM+ G+ P+ +TY
Sbjct: 485 NLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYT 544
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI S G + ++ F +M + P++ T+NALI C++ K+++A K F M
Sbjct: 545 VLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAK 604
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G+ P+ ++Y+ LI G + EA + + M PDS T + +L+ L
Sbjct: 605 GISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHL 655
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 197/437 (45%)
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+D A + M G P V TY ++D FC +V E ++L M++ PN+ T
Sbjct: 171 IDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNV 230
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
LV+G+ + +A EL+ + + L+ EA+ + +M RG
Sbjct: 231 LVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRG 290
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P T++ + L +++ +LD + + + P +Y L+ + G E
Sbjct: 291 AVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAF 350
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ LV +V +YN +ID C++ +D A + EM P++ TF L+ G
Sbjct: 351 LLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGF 410
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK + +EL +L G +PD+F + + I + A EM+ G PP+
Sbjct: 411 CKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDL 470
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITYN+ I L +G++ + L +KM + + PD T+ ++I + + KA F
Sbjct: 471 ITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLE 530
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
ML+ G+ P +Y+ LI + GR A F M + G +P+ T N ++ L + +
Sbjct: 531 MLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRK 590
Query: 481 FEEAHDIVKTSKERGIS 497
++A+ + +GIS
Sbjct: 591 MDQAYKFFTEMQAKGIS 607
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 166/345 (48%), Gaps = 1/345 (0%)
Query: 153 CNTLLYRLSN-NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
CN +L L + +S A + M + G P T++ + + E +L
Sbjct: 157 CNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQM 216
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
K G P TY +L+ L +G + + + + L + +Y+ +I +C+ +
Sbjct: 217 QKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQL 276
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
D A+ + EM R P LVT+NT++ G CK V R+LL +++ PD ++N++
Sbjct: 277 DEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTL 336
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
I R +A +E+ G+ P+ +TYN LI LC +GD+ ++RL +M
Sbjct: 337 IYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGP 396
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
PD++TF L++ FC++ + A++ F ML GL+PD F+Y I +K G +A
Sbjct: 397 DPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFG 456
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M G PD T N+ ++ L + G +EA ++VK G+
Sbjct: 457 MQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGL 501
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 164/339 (48%), Gaps = 8/339 (2%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P YN +I + +I A+L F ++ P TYN LI G+CR+G +D A+
Sbjct: 326 LMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAM 385
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
RL +M G P+V+T+TIL+ GFC + + + M R + P+ + + G
Sbjct: 386 RLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGE 445
Query: 126 FRCLDPHKAF----ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ DP KAF E+L R + +T + + L ++L N EA+ +++KM G
Sbjct: 446 LKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGL-HKLGN---LKEASELVKKMLYNGL 501
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P+ T+ + + L + + + +G+ P TY +L+ + GR
Sbjct: 502 VPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAIL 561
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + + + NV +YN +I+ CKV MD+A + EM+ + I+PN T+ LI+ +C
Sbjct: 562 HFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENC 621
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
+ L +L+ +PD T ++++ L + ++
Sbjct: 622 NLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYK 660
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 89/188 (47%), Gaps = 4/188 (2%)
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD-- 375
+ GFK + T+ ++D L R A + ++V + + IL L
Sbjct: 74 QTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKKS 133
Query: 376 -VARSLRLFQKMQADRISPDIYTFNALIQSFC-RMNKIEKAEKAFFSMLTLGLRPDNFSY 433
+ + L +F KM + + PD+ N +++ R + I+ A + + M+ G+RP +Y
Sbjct: 134 MLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTY 193
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ ++ + K G+ EA Q L M++ GC P+ T N+++ L G E+A ++++
Sbjct: 194 NTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLR 253
Query: 494 RGISFKSF 501
G+ ++
Sbjct: 254 LGLEVSAY 261
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 234/485 (48%), Gaps = 5/485 (1%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
RL + ++D + K ++I L FQ+M + P ++ I R + L KQ
Sbjct: 59 RLRSGIVD-IKKDDAIAL----FQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQ 113
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
+E G A N+YT I+I+ FC + + VL + + P+ T +L+ G+F
Sbjct: 114 LELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGK 173
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A L+ R +E + N+++ + + S A +LRKM +R + T+
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L ++ + +G+K TY L+ L KAG+ +G L +
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+V NV ++N+++D F K + A E+ +EM R I+PN++T+NTL+ G+C + +
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+L +++ PD TF S+I C R +D + + + G+ N +TY+IL++
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C G + + LFQ+M + + PD+ T+ L+ C K+EKA + F + +
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
Y+ +I+ + K G+ ++A F S+ G P+ T +++ L ++G EA+ +++
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 491 SKERG 495
+E G
Sbjct: 534 MEEDG 538
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 231/490 (47%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ A+ ++ +L +Q+ ++ + +T NI+I+ CR A +
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ LGY P+ T+ LI G +V+E +++ M E P+ T S+V+G+ R
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D A +LL + ER +T++ L + A ++ ++M +G T
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ V L N+ +L + R + P T+ +L++ K G+ E + +
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ N+ +YN ++D +C N + A + M +P++VTF +LI G+C V
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
++ + + G + T++ ++ C++ + + A + EMV GV P+ +TY IL+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G + ++L +F+ +Q ++ I + +I+ C+ K+E A F S+ G++
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P+ +Y+ +I L K G EA ME++G P+ T N ++ ++ G + +
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 488 VKTSKERGIS 497
++ K G S
Sbjct: 566 IEEMKSCGFS 575
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 207/440 (47%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P T +N +I L + A + +M + C+PD TYN +++GICR G
Sbjct: 152 LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 211
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L+++ME +V+TY+ +ID C + + + M+ + + + T SLV
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + + LL + RE + + N LL EA + ++M RG P
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + L+E +LD ++ P T+ L++ R +G +
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
++ K LV+N +Y++++ FC+ + A E+ +EM + P+++T+ L+ G C +
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ K E+ L + + ++I+ +C+ + EDA + + GV PN +TY
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
++I LC G ++ + L +KM+ D +P+ T+N LI++ R + + K M +
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Query: 424 LGLRPDNFSYSALIKALIKS 443
G D S +I L+ +
Sbjct: 572 CGFSADASSIKMVIDMLLSA 591
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 228/494 (46%), Gaps = 7/494 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ + N +I+ + AY ++ +PD T+N LI G+ G V EA
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ LV +M G P+V TY +++G C + + +L M+ERNV + T +++
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 125 VFR--CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ R C+D + L + ME + + +V N+L+ L ++ A +L+ M R
Sbjct: 238 LCRDGCIDAAIS---LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P TF+ + V L E + I RG+ P TY LM+ R E +
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L+ + +++ ++ ++ +I +C V +D ++ R + R + N VT++ L+ G C
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ ++ EL ++ G PD T+ ++D LC + E AL+ ++ + + +
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y +I +C G V + LF + + P++ T+ +I C+ + +A M
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ-QGR 480
G P++ +Y+ LI+A ++ G + + M+ G + D+ + ++++ L+ R
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKR 594
Query: 481 FEEAHDIVKTSKER 494
+ + K SK R
Sbjct: 595 LTLRYCLSKGSKSR 608
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+DA+ EM+ P+ + ++ ++ L ++++ + I+ +IYT N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I FCR K A ++ LG PD +++ LIK L G+ EA M +NGC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
PD T N I+ + + G A D+++ +ER + F
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF 229
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS G+ + Y+ ++ +S I LA FQ+M PD TY IL+ G+C G
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++AL + + ++ + YT +I+G C +V + + + + + V PN T
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ + +A LL + E NTL+ + + +A ++ +M G
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Query: 181 YLPESSTFDYTVTCLVTGL 199
+ ++S+ + L++ +
Sbjct: 574 FSADASSIKMVIDMLLSAM 592
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 219/465 (47%), Gaps = 38/465 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ + + ++ AL +D A F +S ++C+P FTY +L+ G+C+ V+ A
Sbjct: 158 GITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERA 217
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++M GY P++ Y+ LIDG A RV E +++++M R P S+V G
Sbjct: 218 CDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAG 277
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +C EA +++M R P
Sbjct: 278 LCKC-----------------------------------GRIQEAVKTIQEMRRRRLRPR 302
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + VT + + + +++ R P +Y + +EALY GR E ++
Sbjct: 303 VDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFE 362
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++++Y ++ID FCK M AT + R M + PN + ++ G K +
Sbjct: 363 TMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSS 422
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV--EWGVPPNTIT 362
+ + EL +L+ G P T+N++I+ LC+ + ++AL+ L EM + + P+ +T
Sbjct: 423 RLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVT 482
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y+++I L +G R+ L +M + + PD +T+ +LIQ+ K+ +A + ML
Sbjct: 483 YSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEML 542
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
G+ PD+ +Y L++ L +S D A M +NG P+ +T
Sbjct: 543 KAGIFPDDHTYGTLVQILCRSD-VDAAWDLLQEMMRNGHTPNEFT 586
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 208/474 (43%), Gaps = 54/474 (11%)
Query: 46 FTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEI 105
FT N L+ + R G + +AL + PNV ++ IL+ GF V +L
Sbjct: 97 FTRNSLLLALVRGGHLSDALGFFQSSIS---EPNVSSFNILLRGFAARDDFEVVNALLRE 153
Query: 106 MKERNVCPNEATVRSLVHGVF-------RCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
MK R + N AT HGV R LD ++ + + EP L+
Sbjct: 154 MKSRGITSNGAT-----HGVILSALCARRDLDKAVSYFNSVSPNKCEPTL--FTYTVLVD 206
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
L A + +M +GY P+ + + L ++E ++D + RG P
Sbjct: 207 GLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPP 266
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
Y ++ L K GR E + + + + RL V++Y+ ++ + + +++A +
Sbjct: 267 TAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVM 326
Query: 279 REMRDRDIAPNLV-----------------------------------TFNTLISGHCKD 303
EM DRD AP+ + T+ +I CK+
Sbjct: 327 EEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKE 386
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ +L ++ + KP+++ + ++D ++ R E+AL+ +++ G+ P+T+TY
Sbjct: 387 GSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTY 446
Query: 364 NILIRSLCAIGDVARSLRLFQKMQ--ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
N +I +LC + + +L L ++MQ + + P I T++ +I ++ E+A M
Sbjct: 447 NTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEM 506
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ G+ PD F+Y++LI+ L +G+ A + M + G PD +T +++ L
Sbjct: 507 IDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQIL 560
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 147/297 (49%), Gaps = 5/297 (1%)
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR-LV 252
LV G L++ G + I +P S++ +L+ + A D E L K R +
Sbjct: 105 ALVRGGHLSDALGFFQSSIS---EPNVSSFNILLRG-FAARDDFEVVNALLREMKSRGIT 160
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
SN ++ +++ C +D+A + P L T+ L+ G CK +V + ++
Sbjct: 161 SNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDV 220
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
++ G+KPD ++S+ID L +A R ++A + MV G PP + Y ++ LC
Sbjct: 221 FEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCK 280
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G + +++ Q+M+ R+ P + T++ ++ + M K+EKA M PD S
Sbjct: 281 CGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTIS 340
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
Y+ I+AL GR +EA++ F +M + GC PD +T +I++ ++G A +++
Sbjct: 341 YTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLR 397
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 163/344 (47%), Gaps = 5/344 (1%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
N+LL L S+A + P S+F+ + D +L
Sbjct: 100 NSLLLALVRGGHLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVVNALLREMKS 156
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVE-GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
RG+ +T+ +++ AL A RD++ Y N V ++ + +Y +++D CK + ++
Sbjct: 157 RGITSNGATHGVILSALC-ARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVE 215
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
RA ++ EM + P+++ +++LI G K V + R+L+ +++ G P + S++
Sbjct: 216 RACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIV 275
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
LC+ R ++A+ + EM + P TY+ ++ +G V ++ + ++M +
Sbjct: 276 AGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCA 335
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PD ++ I++ + + E+AEK F +M+ G +PD +Y +I K G A
Sbjct: 336 PDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHV 395
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M++ P+ Y +I++ V+ R EEA ++ + + GI
Sbjct: 396 LRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGI 439
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++I L + + A ++M PD TY L+ +CR VD A
Sbjct: 510 GVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAA 568
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGF 90
L+++M G+ PN +T+ + GF
Sbjct: 569 WDLLQEMMRNGHTPNEFTFKAVEKGF 594
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/490 (27%), Positives = 234/490 (47%), Gaps = 20/490 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQM--SVDQCKPDRFTYNILIHGICRIGVVD 62
G P T +N V+ A V + +D+A ++M S PD F+YN++I G+ R G
Sbjct: 152 GARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGS 211
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+AL++ +M +G APN TY +IDG + FR+ + M PN T L+
Sbjct: 212 DALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLL 271
Query: 123 HGVFRC--LDPHKAF--ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
G+ R +D +A E+ M + T ++ + L + +M S A L+K
Sbjct: 272 SGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVM 331
Query: 179 RGYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
G YT + L+ GL + + + + + G+ P Y L+ Y
Sbjct: 332 LGA--------YTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLING-YCQV 382
Query: 235 RDVEGDRYLNHVFKDRLVSNVN-SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
RD+ G + K R + + +YN +I+ CK+ M+ +A ++ EM + P++ TF
Sbjct: 383 RDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETF 442
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
NTLI + ++ K +L + + G K D +F S++ C+ + +A+ L +M+
Sbjct: 443 NTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIY 502
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
V PN YN +I + GD ++L L +KM+ +S I T+N L++ CR ++I++
Sbjct: 503 KDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDE 562
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
AE+ +++ GLRPD SY+ +I A G D+A + M + G P T + ++
Sbjct: 563 AEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVS 622
Query: 474 TLVQQGRFEE 483
L GR +
Sbjct: 623 ALASAGRVHD 632
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 218/491 (44%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN VI L +S A F +M P+R TYN +I G + G ++ RL
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRL 251
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
QM G PNV TY +L+ G C R+ E +++ M ++ P+ T L G+ R
Sbjct: 252 RDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTR 311
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ L +++ + C+ LL L + ++A + + G +P +
Sbjct: 312 TGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVI 371
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + DL I + R ++P TY L+ L K + + + +
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K + +V ++N +ID + +++ + +M+ + I ++++F +++ CK+ ++
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ +L ++ P+ +NS+ID + E AL + +M GV + +TYN+L+
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLL 551
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+ LC + + L ++ + PD+ ++N +I + C +KA + M G+R
Sbjct: 552 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 611
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P + L+ AL +GR + + + M P S ++++ V+ + +
Sbjct: 612 PTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASL 671
Query: 488 VKTSKERGISF 498
K E+GI+F
Sbjct: 672 KKEMSEKGIAF 682
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 199/439 (45%), Gaps = 35/439 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G++P+ YN +ID VK ++ + QM D KP+ TYN+L+ G+CR G +DE
Sbjct: 223 MGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDE 282
Query: 64 ALRLVKQMEGLGYAPNVYTYTILID----------------------------------- 88
L+ +M P+ +TY+IL D
Sbjct: 283 TRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLN 342
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
G C +VA+ +V E++ + P +L++G + D AF + + R
Sbjct: 343 GLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRP 402
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
+ N L+ L M ++A ++ +M G P TF+ + T L + +L
Sbjct: 403 DHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVL 462
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
++G+K ++ +++A K G+ E L+ + + N YN +ID + +
Sbjct: 463 SDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIES 522
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
++A + +M++ ++ ++VT+N L+ G C+ +++ + EL+ L G +PD ++
Sbjct: 523 GDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSY 582
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N++I C + AL+ L EM ++G+ P T + L+ +L + G V L+Q+M
Sbjct: 583 NTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLH 642
Query: 389 DRISPDIYTFNALIQSFCR 407
+ P + ++ ++ R
Sbjct: 643 KNVEPSSSIYGIMVDAYVR 661
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 8/230 (3%)
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A E+C + P+L + N L+ R +L+ G +PD F +N ++
Sbjct: 112 AGEVCSPL------PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQ 165
Query: 334 CLCRAHRFEDALDCLSEM--VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
A + AL L M E PP+ +YN++I L G + +L++F +M +
Sbjct: 166 ACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGV 225
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
+P+ T+N +I + +E + ML G +P+ +Y+ L+ L ++GR DE +
Sbjct: 226 APNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRA 285
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
M + PD +T +++ + L + G + + S ++G+ ++
Sbjct: 286 LMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAY 335
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 208/434 (47%), Gaps = 38/434 (8%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N ++ ALVK N +++M + P+ T+N +I+G+C++G +++A +V M+
Sbjct: 199 NPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKV 258
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFR---VLEIMKERNVCPNEATVRSLVHGVFRCLD 130
G+ PNV TY LIDG+C RV ++++ +L+ M E V PN T L+ G
Sbjct: 259 WGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDG------ 312
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
F + E L S A + +M +G P T++
Sbjct: 313 ----------FCKDENL-------------------SAALKVFEEMQSQGLKPTVVTYNS 343
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
V L LNE +LD + +KP TY L+ K E +++ K
Sbjct: 344 LVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQG 403
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
L NV ++N ++ +CK M+ A + + M ++ PN T+N LI G C++ ++ + +
Sbjct: 404 LTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVK 463
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
LL + G K D T+N +I C + A + EM++ G+ P+ +TYNIL+
Sbjct: 464 NLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGY 523
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C G++ +L L ++M+ + ++ T+N LIQ +CR K+E A ML GL P+
Sbjct: 524 CMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNR 583
Query: 431 FSYSALIKALIKSG 444
+Y + + +++ G
Sbjct: 584 TTYEIIKEEMMEKG 597
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 166/348 (47%), Gaps = 3/348 (0%)
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
L CN LL L + + ++M R P TF+ + L LN+ ++D
Sbjct: 196 LSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDD 255
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRD---VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
G P TY L++ K GR + D L + ++++ N ++N++ID FCK
Sbjct: 256 MKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCK 315
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+ A ++ EM+ + + P +VT+N+L++G C + ++++ + LL +L KP+ T
Sbjct: 316 DENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVIT 375
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+N++I+ C+ E+A + + + G+ PN IT+N L+ C G + + L + M
Sbjct: 376 YNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVML 435
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
P+ T+N LI FCR K+E+ + M G++ D +Y+ LI A +
Sbjct: 436 EKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPK 495
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+A + M G P T N++L +G A ++ K ++ G
Sbjct: 496 KAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEG 543
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 175/372 (47%), Gaps = 3/372 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP+ +N VI+ L K ++ A M V P+ TYN LI G C++G V +
Sbjct: 226 ISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMY 285
Query: 66 R---LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+ ++K+M +PN T+ +LIDGFC + ++ +V E M+ + + P T SLV
Sbjct: 286 KADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 345
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G+ ++A LL + + N L+ + EA + +G +G
Sbjct: 346 NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLT 405
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P TF+ + + E + +++G P STY L+ + G+ E
Sbjct: 406 PNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNL 465
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
LN + + ++ +YN++I +C+ +A + EM D+ + P+ +T+N L++G+C
Sbjct: 466 LNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCM 525
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + L + + G + T+N +I CR + EDA L+EM+E G+ PN T
Sbjct: 526 EGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTT 585
Query: 363 YNILIRSLCAIG 374
Y I+ + G
Sbjct: 586 YEIIKEEMMEKG 597
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 109/212 (51%), Gaps = 3/212 (1%)
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
++++ N L+S K+ E + ++ P+ TFN++I+ LC+ + A D +
Sbjct: 194 SVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVV 253
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLR---LFQKMQADRISPDIYTFNALIQSF 405
+M WG PN +TYN LI C +G V + + + ++M +++SP+ TFN LI F
Sbjct: 254 DDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGF 313
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
C+ + A K F M + GL+P +Y++L+ L G+ +EAK M + P+
Sbjct: 314 CKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNV 373
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T N ++ ++ EEA ++ ++G++
Sbjct: 374 ITYNALINGYCKKKLLEEARELFDNIGKQGLT 405
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 134/320 (41%), Gaps = 51/320 (15%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN++++ L ++ A + +M KP+ TYN LI+G C+ +++EA
Sbjct: 333 GLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEA 392
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + G PNV T+ L+ G+C ++ E F + ++M E+ PN +T L+ G
Sbjct: 393 RELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVG 452
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R E +L +M RG +
Sbjct: 453 FCR-----------------------------------EGKMEEVKNLLNEMQCRGVKAD 477
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ ++ + + ++D + +G+KP TY +L+ G
Sbjct: 478 TVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRK 537
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K+ +NV +YN++I +C+ ++ A + EM ++ + PN T+
Sbjct: 538 QMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTY----------- 586
Query: 305 EVHKTRELLVMLLECGFKPD 324
E+ K ++E GF PD
Sbjct: 587 EIIKEE-----MMEKGFLPD 601
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 2/239 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ YNA+I+ K ++ A F + P+ T+N L+HG C+ G ++EA
Sbjct: 369 LKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAF 428
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L K M G+ PN TY LI GFC ++ EV +L M+ R V + T L+
Sbjct: 429 LLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAW 488
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+P KA L+ +++ L N LL A + ++M G
Sbjct: 489 CEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANV 548
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG--RDVEGDRY 242
T++ + L + G+L+ +++G+ P +TY ++ E + + G D+EG Y
Sbjct: 549 VTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLY 607
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 3/167 (1%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
+K + N ++ L + + F EM+ + PN IT+N +I LC +G + ++
Sbjct: 191 YKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAG 250
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA---FFSMLTLGLRPDNFSYSALI 437
+ M+ P++ T+N LI +C+M ++ K KA M+ + P++ +++ LI
Sbjct: 251 DVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLI 310
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
K A + F M+ G P T N ++ L +G+ EA
Sbjct: 311 DGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEA 357
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 224/474 (47%), Gaps = 39/474 (8%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYT 82
+++IDL F M + P +N L+ I ++ D + L K+ME LG ++YT
Sbjct: 67 NDAIDL----FSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122
Query: 83 YTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFM 142
+ I+I+ FC +V+ +L M + P+ T+ SLV+G R
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR--------------- 167
Query: 143 EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
+ S+A +++ KM + GY P+ ++ + L +N
Sbjct: 168 --------------------RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
+ ++G++P TY L+ L + R + R L+ + K ++ NV +Y+ ++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
D F K + A E+ EM I P++VT+++L++G C + + ++ +++ G
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
D ++N++I+ C+A R ED + EM + G+ NT+TYN LI+ GDV ++
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
F +M ISPDI+T+N L+ C ++EKA F M + D +Y+ +I+ + K
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+G+ +EA F S+ G PD T ++ L +G E + K+ G+
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 209/446 (46%), Gaps = 10/446 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ A+VK D+ ++M V + D +T+NI+I+ C V AL +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P+ T L++GFC RV++ +++ M E P+ +++ + +
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLPESS 186
+ AF+ + +ER+ + +V T L L N+S S+AA +L M + P
Sbjct: 203 TKRVNDAFDFF-KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + V + E + + ++ + P TY L+ L R E ++ + +
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLM 321
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+++V SYN +I+ FCK ++ ++ REM R + N VT+NTLI G + +V
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
K +E + G PD +T+N ++ LC E AL +M + + + +TY +
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
IR +C G V + LF + + PDI T+ ++ C + + E + M GL
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Query: 427 RPDNFSYS--------ALIKALIKSG 444
++ + S LIK ++ G
Sbjct: 502 MKNDCTLSDGDITLSAELIKKMLSCG 527
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 132/280 (47%), Gaps = 35/280 (12%)
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+++ ++N+VI+CFC + A I +M P+ VT +L++G C+ V L
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD-------------------------- 346
+ ++E G+KPD +N++ID LC+ R DA D
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 347 ---------CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
LS+M++ + PN ITY+ L+ + G V + LF++M I PDI T
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+++L+ C ++I++A + F M++ G D SY+ LI K+ R ++ + F M
Sbjct: 298 YSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
Q G ++ T N +++ Q G ++A + GIS
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 153/352 (43%), Gaps = 37/352 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P YNA+ID+L K+ ++ A+ F+++ +P+ TY L++G+C +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A RL+ M PNV TY+ L+D F +V E + E M ++ P+ T SLV+
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVN 303
Query: 124 GVFRCL-----DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
G+ CL + ++ F+L++ + L + NTL+ + + R+M
Sbjct: 304 GL--CLHDRIDEANQMFDLMV---SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
RG + + T++ + D+++ G+ P TY +L+ L G +
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ K + ++ +Y VI CK ++ A + + + + P++VT+ T++S
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Query: 299 GHC---------------------------KDAEVHKTRELLVMLLECGFKP 323
G C D ++ + EL+ +L CG+ P
Sbjct: 479 GLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAP 530
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 85/175 (48%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P FN ++ + + +++ + +M G+ + T+NI+I C V+ +L +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
KM PD T +L+ FCR N++ A M+ +G +PD +Y+A+I +L K
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ R ++A F +E+ G P+ T ++ L R+ +A ++ ++ I+
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%)
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
R + DA+D S+MV+ P+ + +N L+ ++ + + L +KM+ I D+Y
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
TFN +I FC ++ A ML LG PD + +L+ + R +A M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ G PD N I+++L + R +A D K + +GI
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI 221
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F GISP YN ++ L + ++ A + F+ M + D TY +I G+C+ G
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
V+EA L + G P++ TYT ++ G C + EV + MK+ + N+ T+
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 237/488 (48%), Gaps = 7/488 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS + Y+A++ AL K ++ + ++M +P+ +T+ I I + R G +DEA
Sbjct: 222 GLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEA 281
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++M+ G P++ TYT+LID CNA ++ + MK P++ +L+
Sbjct: 282 YEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDK 341
Query: 125 V--FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGY 181
F LD K F ME + +V T+L L EA A M +G
Sbjct: 342 FNDFGDLDTFKEF---WSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGI 398
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
LP T++ + L+ + + +LDT GV+P TY+ ++ K+G +
Sbjct: 399 LPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVE 458
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ +V N+ + N + ++ + A + +R+ +AP+ VT+N ++ +
Sbjct: 459 TFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYS 518
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K +V + LL ++ G +PD NS+ID L +A R ++A M + + P +
Sbjct: 519 KVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVV 578
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN L+ L G V +++ LF+ M + SP+ +FN L+ FC+ +++E A K F M
Sbjct: 579 TYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKM 638
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ +PD +Y+ +I LIK + + A F ++++ +PD T +L LV+ G+
Sbjct: 639 TVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQI 697
Query: 482 EEAHDIVK 489
+A I +
Sbjct: 698 GDAISIAR 705
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 229/497 (46%), Gaps = 5/497 (1%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN +I L++S A +++M + KP TY+ L+ + + + + L+K+ME
Sbjct: 195 YNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEME 254
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
LG PNVYT+TI I A ++ E + + M + P+ T L+ +
Sbjct: 255 DLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLE 314
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A EL ++ +++ TLL + ++ +M GY+P+ TF V
Sbjct: 315 NAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILV 374
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L D +E D K+G+ P TY L+ L +AGR + + L+ + +
Sbjct: 375 DVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQ 434
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+Y ID F K +A E +M+ + I PN+V N + + + + + +
Sbjct: 435 PTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTM 494
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L E G PD T+N M+ C + + ++A++ LSEM+ G P+ I N LI SL
Sbjct: 495 FNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYK 554
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G V + ++F +M+ ++SP + T+N L+ + +++KA + F SM+ P+ S
Sbjct: 555 AGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTIS 614
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA----HDIV 488
++ L+ K+ + A + F M C PD T N ++ L+++ + A H +
Sbjct: 615 FNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK 674
Query: 489 KTSKERGISFKS-FPGL 504
K+ ++ + PGL
Sbjct: 675 KSMHPDHVTICTLLPGL 691
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 233/494 (47%), Gaps = 3/494 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P + N++ID+L K+ +D A+ F +M + P TYN L+ G+ + G V +A
Sbjct: 537 GCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKA 596
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L + M +PN ++ L+D FC V ++ M + P+ T ++++G
Sbjct: 597 IELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYG 656
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK-MGDRGYLP 183
+ + + AF + + +C TLL L +A +I R M +
Sbjct: 657 LIKENKVNHAFWFFHQLKKSMHPDHVTIC-TLLPGLVKCGQIGDAISIARDFMYQVRFRV 715
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
S ++ + + ++++ + + G+ S + L+ L K R++ +
Sbjct: 716 NRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIF 775
Query: 244 NHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ K +S + SYN +I +V+ ++A ++ ++M++ AP+ TFN L++ H K
Sbjct: 776 DKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGK 835
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ + EL ++ KPD T+N +I L +++ + ALD ++V P T
Sbjct: 836 SGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRT 895
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y LI L +G + ++RLF++M P+ FN LI + ++ E A + F M+
Sbjct: 896 YGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMV 955
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G+RPD SY+ L+ L +GR DEA F ++ G +PD N I+ L + R E
Sbjct: 956 NEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRME 1015
Query: 483 EAHDIVKTSKERGI 496
EA + + RGI
Sbjct: 1016 EALALYNEMRNRGI 1029
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 223/494 (45%), Gaps = 25/494 (5%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ +SP+ YN ++ L K + A F+ M +C P+ ++N L+ C+ V+
Sbjct: 571 MKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVEL 630
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL++ +M + P+V TY +I G +V F +K +++ P+ T+ +L+
Sbjct: 631 ALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLP 689
Query: 124 GVFRC------LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
G+ +C + + F +RF + L+ TL+ + ++ +L
Sbjct: 690 GLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLN--- 746
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR-GVKPRFSTYLLLMEALYKAGRD 236
G E S V L I D F K+ G+ P ++Y L+ L +
Sbjct: 747 --GICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELL----E 800
Query: 237 VEGDRYLNHVFKDRLVSNVN------SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
V +FKD + NV ++NM++ K + E+ +EM R P+
Sbjct: 801 VHYTEKAWDLFKD--MKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDA 858
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
+T+N +IS K + K + L+ F+P T+ +ID L + R E+A+ E
Sbjct: 859 ITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEE 918
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M ++G PN +NILI IGD + +LF++M + I PD+ ++ L+ C +
Sbjct: 919 MSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGR 978
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+++A F + + GL PD +Y+ +I L KS R +EA + M G PD YT N
Sbjct: 979 VDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNS 1038
Query: 471 ILETLVQQGRFEEA 484
++ L G E+A
Sbjct: 1039 LMLNLGLAGMVEQA 1052
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/495 (25%), Positives = 226/495 (45%), Gaps = 38/495 (7%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP+T +N ++D K++ ++LA F +M+V CKPD TYN +I+G+ + V+ A
Sbjct: 609 SPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFW 668
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV------------FRV------------ 102
Q++ P+ T L+ G ++ + FRV
Sbjct: 669 FFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGT 727
Query: 103 -LEIMKERNVCPNEATV-------RSLVHGVFRCLDPHK----AFELLIRFMEREPLTQK 150
+E ++ + E V S + + R L HK A+++ +F ++ ++
Sbjct: 728 LVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPT 787
Query: 151 LVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
L N L+ L +A + + M + G P++ TF+ + + E +
Sbjct: 788 LASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYK 847
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
I R KP TY +++ +L K+ + + + +Y +ID KV
Sbjct: 848 EMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVG 907
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
++ A + EM D PN FN LI+G+ K + +L ++ G +PD ++
Sbjct: 908 RLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYT 967
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++DCLC A R ++AL +E+ G+ P+ I YN +I L + +L L+ +M+
Sbjct: 968 ILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNR 1027
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
I PD+YT+N+L+ + +E+A++ + + GL PD F+Y+ALI+ S + A
Sbjct: 1028 GIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHA 1087
Query: 450 KQTFLSMEQNGCNPD 464
+ +M +GCNP+
Sbjct: 1088 YTVYKNMMVDGCNPN 1102
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 135/534 (25%), Positives = 230/534 (43%), Gaps = 44/534 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ + I L ++ ID AY F++M + C PD TY +LI +C G ++
Sbjct: 256 LGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLEN 315
Query: 64 ALRLV-----------------------------------KQMEGLGYAPNVYTYTILID 88
A L QME GY P+V T+TIL+D
Sbjct: 316 AKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVD 375
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELL--IRFMEREP 146
C A+ E F ++M+++ + PN T +L+ G+ R A +LL + + +P
Sbjct: 376 VLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQP 435
Query: 147 LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
+ T + + +A KM +G +P + ++ L L E
Sbjct: 436 TAYTYI--TFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKT 493
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+ + + G+ P TY ++M+ K G+ E L+ + ++ +V N +ID
Sbjct: 494 MFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLY 553
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K +D A ++ M+D ++P +VT+NTL+SG K+ V K EL ++ P+
Sbjct: 554 KAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTI 613
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
+FN+++DC C+ E AL S+M P+ +TYN +I L V + F ++
Sbjct: 614 SFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL 673
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKA-EKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
+ + PD T L+ + +I A A M + R + + L+ +
Sbjct: 674 KKS-MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAE 732
Query: 446 FDEAKQTFLSMEQNG-CNPDSYTSNLILETLVQQGRFEEAHDIV-KTSKERGIS 497
D+A + NG C DS+ L+ L + R A+ I K +K+ GIS
Sbjct: 733 MDKAIIFAEELVLNGICREDSFLIPLV-RVLCKHKRELYAYQIFDKFTKKLGIS 785
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/530 (21%), Positives = 205/530 (38%), Gaps = 38/530 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ Y ID KS A F++M P+ N ++ + +G + E
Sbjct: 431 VGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLRE 490
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + + G AP+ TY +++ + +V E +L M P+ V SL+
Sbjct: 491 AKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID 550
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+++ +A+++ R + + + NTLL L +A + M + P
Sbjct: 551 SLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSP 610
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ +F+ + C ++ + KP TY ++ L K + V +
Sbjct: 611 NTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENK-VNHAFWF 669
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE-MRDRDIAPNLVTFNTLISGHCK 302
H K + + + ++ K + A I R+ M N + L+ G
Sbjct: 670 FHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLV 729
Query: 303 DAEVHKT------------------------------RELLVMLL------ECGFKPDKF 326
+AE+ K REL + + G P
Sbjct: 730 EAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLA 789
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
++N +I L H E A D +M G P+ T+N+L+ G + L+++M
Sbjct: 790 SYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEM 849
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ R PD T+N +I S + N ++KA F+ +++ RP +Y LI L K GR
Sbjct: 850 ISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRL 909
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+EA + F M GC P+ N+++ + G E A + K GI
Sbjct: 910 EEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGI 959
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 159/347 (45%), Gaps = 20/347 (5%)
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI--------------- 212
E +L+ M D + ++ Y+++ T L ETC + F+
Sbjct: 91 EVLGVLKSMTDP---IRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEF 147
Query: 213 --KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
K+ ++ TYL + +AL G + LN + K V N SYN +I +
Sbjct: 148 MQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGF 207
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
A E+ R M + P+L T++ L+ K + LL + + G +P+ +TF
Sbjct: 208 CGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTI 267
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
I L RA + ++A + M + G P+ +TY +LI +LC G + + LF KM+A+
Sbjct: 268 CIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANG 327
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
PD + L+ F ++ ++ + M G PD +++ L+ L K+ FDEA
Sbjct: 328 HKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAF 387
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
TF M + G P+ +T N ++ L++ GR E+A ++ T + G+
Sbjct: 388 ATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQ 434
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN +I+ L KS ++ A + +M PD +TYN L+ + G+V++A
Sbjct: 993 GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
R+ ++++ G P+V+TY LI G+ ++ + V + M PN T L
Sbjct: 1053 KRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 210/461 (45%), Gaps = 38/461 (8%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
C PD YN ++ G C G +D A RLV +M P+ YTY LI G C R A
Sbjct: 122 CGPDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANAL 178
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
VL+ M R P+ T L+ C Y+
Sbjct: 179 AVLDEMLRRRCVPDVVTYTILLEAT---------------------------CKRSGYK- 210
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
+A +L +M D+G P+ T++ V + +++ L G +P
Sbjct: 211 -------QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 263
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
+Y ++++ L A R + + + + + NV ++NM+I C+ +++ A E+ +
Sbjct: 264 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 323
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
+ PN +++N L+ CK ++ K L +++ G PD ++N+++ LCR+
Sbjct: 324 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 383
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
+ A++ L ++ + G P I+YN +I L G +L L +M + + PDI T++
Sbjct: 384 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 443
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
+ CR ++IE A +AF + +G+RP+ Y+A+I L K A F M NG
Sbjct: 444 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 503
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
C P+ T +++E L +G +EA D++ RG+ KS
Sbjct: 504 CMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSL 544
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 178/346 (51%), Gaps = 12/346 (3%)
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT--CLVTGLDLNETCGILDT 210
C L+ +LS + +EA +L G P+ ++ V C LD
Sbjct: 99 CAALIKKLSASGRTAEARRVLAACG-----PDVMAYNAMVAGYCGAGQLDAARR-----L 148
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
+ V+P TY L+ L GR L+ + + R V +V +Y ++++ CK +
Sbjct: 149 VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSG 208
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+A ++ EMRD+ P++VT+N +++G C++ V E L L G +P+ ++N
Sbjct: 209 YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 268
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
++ LC A R+EDA + + EM + G PPN +T+N+LI LC G V +L + +++
Sbjct: 269 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 328
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+P+ ++N L+ +FC+ K++KA M++ G PD SY+ L+ AL +SG D A
Sbjct: 329 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 388
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ ++ GC P + N +++ L + G+ +EA +++ +G+
Sbjct: 389 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGL 434
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 170/380 (44%), Gaps = 37/380 (9%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P Y +++A K + A +M C PD TYN++++GIC+ G VD+A+
Sbjct: 191 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 250
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+K + G PN +Y I++ G C A+R + ++ M ++ PN T
Sbjct: 251 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT---------- 300
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
F +LI F+ R+ L + A +L ++ G P S +
Sbjct: 301 -------FNMLISFLCRKGLVEP------------------ALEVLEQIPKYGCTPNSLS 335
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + +++ LD + RG P +Y L+ AL ++G +V+ L H
Sbjct: 336 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSG-EVDVAVELLHQL 394
Query: 248 KDRLVSNV-NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
KD+ + V SYN VID K A E+ EM + + P+++T++T+ +G C++ +
Sbjct: 395 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 454
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ + G +P+ +N++I LC+ A+D + M+ G PN TY IL
Sbjct: 455 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 514
Query: 367 IRSLCAIGDVARSLRLFQKM 386
I L G + + L ++
Sbjct: 515 IEGLAYEGLIKEARDLLDEL 534
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 150/366 (40%), Gaps = 35/366 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P YN V++ + + +D A + + C+P+ +YNI++ G+C ++A
Sbjct: 223 GCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDA 282
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M G PNV T+ +LI C V VLE + + PN + L+H
Sbjct: 283 EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHA 342
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KA L + R + NTLL L + A +L ++ D+G P
Sbjct: 343 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 402
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+++ + L E +L+ + +G++P TY + L +
Sbjct: 403 LISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR------------ 450
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+DR+ + ++ V +D I PN V +N +I G CK
Sbjct: 451 ---EDRIEDAIRAFGKV--------------------QDMGIRPNTVLYNAIILGLCKRR 487
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E H +L ++ G P++ T+ +I+ L ++A D L E+ GV ++
Sbjct: 488 ETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLINK 547
Query: 365 ILIRSL 370
IR L
Sbjct: 548 GAIRLL 553
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 215/467 (46%), Gaps = 36/467 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P + +N ++ +V S+S + + +F S + D +++ I+I G C G ++++
Sbjct: 124 GFVPGSNCFNNLLTFVVGSSSFN-QWWRFFNESKIKVDLDVYSFGIVIKGCCEAGEIEKS 182
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ ++ G++PNV YT LIDG C + + + M + + NE T L+HG
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F+ N + + + KM + G P
Sbjct: 243 LFK-----------------------------------NGIKKQGFEMYEKMQEDGVFPN 267
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + + D +RGV TY L+ L + + E ++ ++
Sbjct: 268 LYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMD 327
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D + N+ +YN +ID FC V + +A +CR+++ R ++P+LVT+N L+SG CK
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKG 387
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +++ + E G KP K T+ +ID R E A+ S M E G+ P+ TY+
Sbjct: 388 DTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYS 447
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI C G + + RLF+ M A ++ P+ +N ++ +C+ +A + F M
Sbjct: 448 VLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEK 507
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
L P+ SY +I+ L K + EA+ M G +P NLI
Sbjct: 508 ELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLI 554
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/487 (23%), Positives = 218/487 (44%), Gaps = 36/487 (7%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
+RLY +I+A V+S S+D + F +M P +N L+ + ++ R
Sbjct: 94 SRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFN 153
Query: 70 QMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
+ + + +VY++ I+I G C A + + F +L ++E PN +L+ G +
Sbjct: 154 ESK-IKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRG 212
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
+ KA +L + + + L++ L N + + + KM + G P
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNL---- 268
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
YT C+ +N+ C K GR + + + + +
Sbjct: 269 YTYNCV-----MNQHC--------------------------KDGRTKDAFKLFDEMRER 297
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
+ N+ +YN +I C+ + A ++ +M+ I PNL+T+NTLI G C ++ K
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
L L G P T+N ++ C+ A + EM E G+ P+ ITY ILI +
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDT 417
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
+ ++ ++++L M+ ++PD++T++ LI FC ++ +A + F M+ L P+
Sbjct: 418 FARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPN 477
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
Y+ ++ K G A + F ME+ P+ + ++E L ++ + +EA +V+
Sbjct: 478 KVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVE 537
Query: 490 TSKERGI 496
+ GI
Sbjct: 538 KMIDTGI 544
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 156/329 (47%), Gaps = 1/329 (0%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
+ + +M D+G++P S+ F+ +T +V N+ + K V ++ ++++
Sbjct: 113 SISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNE-SKIKVDLDVYSFGIVIK 171
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
+AG + L + + NV Y +ID CK +++A ++ EM +
Sbjct: 172 GCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVA 231
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
N T+ LI G K+ + E+ + E G P+ +T+N +++ C+ R +DA
Sbjct: 232 NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLF 291
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
EM E GV N +TYN LI LC + ++ +M++D I+P++ T+N LI FC +
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
K+ KA + + GL P +Y+ L+ K G A + ME+ G P T
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITY 411
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGIS 497
++++T + E+A + +E G++
Sbjct: 412 TILIDTFARMDNMEKAIQLRSPMEELGLT 440
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 141/334 (42%), Gaps = 39/334 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN V++ K A+ F +M + TYN LI G+CR +EA
Sbjct: 263 GVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEA 322
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ QM+ G PN+ TY LIDGFC ++ + + +K R + P+ T LV G
Sbjct: 323 NKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG 382
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D S A ++++M +RG P
Sbjct: 383 FCKKGD-----------------------------------TSGAGKVVKEMEERGIKPS 407
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + ++ + + + G+ P TY +L+ G+ E R
Sbjct: 408 KITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFK 467
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +L N YN ++ +CK RA + REM ++++ PN+ ++ +I CK+
Sbjct: 468 LMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKER 527
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
+ + L+ +++ G P +S+++ + RA
Sbjct: 528 KSKEAEGLVEKMIDTGIDPS----DSILNLISRA 557
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 58/113 (51%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG++P Y+ +I ++ A F+ M + +P++ YN ++ G C+ G
Sbjct: 437 LGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYR 496
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEA 116
ALRL ++ME PNV +Y +I+ C ++ E ++E M + + P+++
Sbjct: 497 ALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDS 549
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 220/473 (46%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
+Y A++D L K ID A F+ D P+ TY +LI +C+ G VD A +++ +M
Sbjct: 351 MYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEM 410
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
E +PNV T++ +I+G V + + MKER + PN T +++ G F+CL
Sbjct: 411 EEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQ 470
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
A ++ + K + ++L+ L N +A A+ R+M +RG L + +
Sbjct: 471 EAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTL 530
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ L +L + ++ + P Y + + L G+ E + +L + L
Sbjct: 531 IDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGL 590
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+ +YN +I + +A ++ M+ I PNL+T++TLI G + V K +
Sbjct: 591 KPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKY 650
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
LL + GF P T ++ + R + L+ M+ G+ + YN L+R LC
Sbjct: 651 LLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLC 710
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
G +++ + ++M I+PD TFNALI + ++ A + ML G+ P+
Sbjct: 711 YNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVA 770
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+++ L+ L +GR E+ M++ G P + T ++++ +Q EA
Sbjct: 771 TFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEA 823
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 135/524 (25%), Positives = 224/524 (42%), Gaps = 70/524 (13%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N+++D K ++ A+ ++M D YN L+ G+CR G VD A +V M+
Sbjct: 177 WNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMK 236
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G PNV TYT+ I +C V + F + E M + V P+ T+ +LV G+ C D
Sbjct: 237 RDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGL--CKDG- 293
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
RF SEA A+ R+M G P T+ +
Sbjct: 294 -------RF-------------------------SEAYALFREMEKIGAAPNHVTYCMLI 321
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L NE+ +L + RGV Y LM+ L K G+ E H D
Sbjct: 322 DTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHT 381
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
N +Y ++ID CK +D A ++ EM ++ I+PN+VTF+++I+G K V K +
Sbjct: 382 PNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDY 441
Query: 313 LVMLLECGFKP-----------------------------------DKFTFNSMIDCLCR 337
+ + E G P +KF +S+++ L +
Sbjct: 442 MREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKK 501
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
+ E A EM E GV + + Y LI L G++ + ++ Q++ + PD
Sbjct: 502 NGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVV 561
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+N I C + K ++AE M + GL+PD +Y+ +I A + G+ +A + M+
Sbjct: 562 YNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMK 621
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
++ P+ T + ++ L + G E+A ++ G S S
Sbjct: 622 RSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSL 665
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 128/554 (23%), Positives = 230/554 (41%), Gaps = 72/554 (12%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ Y +IDAL K+ ++D A +M P+ T++ +I+G+ + G V +A
Sbjct: 381 TPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATD 440
Query: 67 LVKQMEGLGYAPNVYTYTILIDG-----------------FCNA---------------- 93
+++M+ G PNV TY +IDG C
Sbjct: 441 YMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLK 500
Query: 94 --KRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL 151
++ + + M ER V + +L+ G+F+ + AF++ E+ L +
Sbjct: 501 KNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAV 560
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
V N + L + EA + L +M G P+ T++ + + +L+
Sbjct: 561 VYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGM 620
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL---------------------------- 243
+ +KP TY L+ L++AG VE +YL
Sbjct: 621 KRSSIKPNLITYSTLIVGLFEAGA-VEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRR 679
Query: 244 --------NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
+ L +++ YN ++ C M +A + EM R IAP+ +TFN
Sbjct: 680 SDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNA 739
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
LI GH K + +L G P+ TFN+++ L A R ++ L+EM + G
Sbjct: 740 LILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRG 799
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ P+ +TY+IL+ + ++RL+ +M P + T+NALI F ++ + +A+
Sbjct: 800 IEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAK 859
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ F M G+ P + +Y L+ K E ++ M++ G +P T + I
Sbjct: 860 ELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAF 919
Query: 476 VQQGRFEEAHDIVK 489
+ G EA ++K
Sbjct: 920 SKPGMSWEARRLLK 933
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 136/565 (24%), Positives = 231/565 (40%), Gaps = 76/565 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y I + N++D A+ +++M PD T + L+ G+C+ G EA
Sbjct: 239 GVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEA 298
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC------------ 112
L ++ME +G APN TY +LID A+R E +L + R V
Sbjct: 299 YALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDW 358
Query: 113 -----------------------PNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
PN T L+ + + + A ++L E+
Sbjct: 359 LCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPN 418
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD-------------------- 189
+ ++++ L +A +R+M +RG P T+
Sbjct: 419 VVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYH 478
Query: 190 -----------YTVTCLVTGLDLNETCGILDTFIK----RGVKPRFSTYLLLMEALYKAG 234
+ V LV GL N + + RGV Y L++ L+K G
Sbjct: 479 EMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTG 538
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
+ + + L+ + YN+ I+C C + A EM+ + P+ VT+N
Sbjct: 539 NLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYN 598
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
T+I+ ++ + K +LL + KP+ T++++I L A E A L+EM
Sbjct: 599 TMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSS 658
Query: 355 GVPPNTITYNILIRSLCAIGDVARS---LRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
G P ++T+ ++++ C+ G RS L + + M + DI +N L++ C
Sbjct: 659 GFSPTSLTHRRVLQA-CSQGR--RSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMT 715
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
KA M G+ PD +++ALI KSG D A T+ M +G +P+ T N +
Sbjct: 716 RKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTL 775
Query: 472 LETLVQQGRFEEAHDIVKTSKERGI 496
L L GR E+ ++ K+RGI
Sbjct: 776 LGGLESAGRIGESDMVLNEMKKRGI 800
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 126/244 (51%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+V +N ++D +CKV M+ A + M+ + + ++V +N+L++G C+ EV R+++
Sbjct: 173 DVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMV 232
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ G +P+ T+ I CR + +DA EMV GV P+ +T + L+ LC
Sbjct: 233 DTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKD 292
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G + + LF++M+ +P+ T+ LI + + + ++ +++ G+ D Y
Sbjct: 293 GRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMY 352
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+AL+ L K G+ DEAK F + P+ T ++++ L + G + A ++ +E
Sbjct: 353 TALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEE 412
Query: 494 RGIS 497
+ IS
Sbjct: 413 KSIS 416
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 169/409 (41%), Gaps = 35/409 (8%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y +ID L K+ ++ A+ Q+++ PD YN+ I+ +C +G EA +++M+
Sbjct: 527 YTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQ 586
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G P+ TY +I + A+ ++L MK ++ PN T +L+ G+F
Sbjct: 587 STGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVE 646
Query: 133 KAFELLIRFMER----EPLTQK-------------------------------LVCNTLL 157
KA LL LT + V NTL+
Sbjct: 647 KAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLV 706
Query: 158 YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK 217
L N M +A +L +M RG P++ TF+ + L+ D + G+
Sbjct: 707 RVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGIS 766
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
P +T+ L+ L AGR E D LN + K + + +Y++++ + K + A +
Sbjct: 767 PNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRL 826
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
EM + P + T+N LIS K + + +EL + G P T++ ++ +
Sbjct: 827 YCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSK 886
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
+ L +M E G P+ T + + R+ G + RL + +
Sbjct: 887 LRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNL 935
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 84/221 (38%), Gaps = 72/221 (32%)
Query: 348 LSEMVEWGVPPNTIT-------------------------------------YNILIRSL 370
L+EM + GVP + +T +N L+
Sbjct: 125 LAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGY 184
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQS-------------------------- 404
C +GD+ + + ++M+A + D+ +N+L+
Sbjct: 185 CKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNV 244
Query: 405 ---------FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
+CR N ++ A + M+ G+ PD + SAL+ L K GRF EA F
Sbjct: 245 VTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFRE 304
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
ME+ G P+ T ++++TL + R E+ ++ RG+
Sbjct: 305 MEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGV 345
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 237/487 (48%), Gaps = 9/487 (1%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
RL + ++D + K ++I L FQ+M + P ++ I R + L KQ
Sbjct: 59 RLRSGIVD-IKKDDAIAL----FQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQ 113
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
+E G A N+YT I+I+ FC + + VL + + P+ T +L++G+ CL+
Sbjct: 114 LELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGL--CLE 171
Query: 131 PH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
KA L+ R +E + N+++ + + S A +LRKM +R + T+
Sbjct: 172 GKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTY 231
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ L ++ + +G+K TY L+ L KAG+ +G L +
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+V NV ++N+++D F K + A E+ +EM R I+PN++T+NTL+ G+C + +
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+L +++ PD TF S+I C R +D + + + G+ N +TY+IL++
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
C G + + LFQ+M + + PD+ T+ L+ C K+EKA + F + +
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
Y+ +I+ + K G+ ++A F S+ G P+ T +++ L ++G EA+ ++
Sbjct: 472 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Query: 489 KTSKERG 495
+ +E G
Sbjct: 532 RKMEEDG 538
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 233/490 (47%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P ++ A+ ++ +L +Q+ ++ + +T NI+I+ CR A +
Sbjct: 86 PGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ LGY P+ T+ LI+G C +V++ +++ M E P+ T S+V+G+ R
Sbjct: 146 LGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICR 205
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D AF++L + ER +T++ L + A ++ ++M +G T
Sbjct: 206 SGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ V L N+ +L + R + P T+ +L++ K G+ E + +
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ N+ +YN ++D +C N + A + M +P++VTF +LI G+C V
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
++ + + G + T++ ++ C++ + + A + EMV GV P+ +TY IL+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G + ++L +F+ +Q ++ I + +I+ C+ K+E A F S+ G++
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P+ +Y+ +I L K G EA ME++G P+ T N ++ ++ G + +
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 488 VKTSKERGIS 497
++ K G S
Sbjct: 566 IEEMKSCGFS 575
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 214/453 (47%), Gaps = 4/453 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P T +N +I+ L + A + +M + C+PD TYN +++GICR G
Sbjct: 152 LGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSL 211
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++++ME +V+TY+ +ID C + + + M+ + + + T SLV
Sbjct: 212 AFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + + LL + RE + + N LL EA + ++M RG P
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + L+E +LD ++ P T+ L++ R +G +
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
++ K LV+N +Y++++ FC+ + A E+ +EM + P+++T+ L+ G C +
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ K E+ L + + ++I+ +C+ + EDA + + GV PN +TY
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
++I LC G ++ + L +KM+ D +P+ T+N LI++ R + + K M +
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
G D S +I L+ SG D ++FL M
Sbjct: 572 CGFSADASSIKMVIDMLL-SGELD---KSFLDM 600
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 224/476 (47%), Gaps = 6/476 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ + N +I+ + AY ++ +PD T+N LI+G+C G V +A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKA 177
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ LV +M G P++ TY +++G C + + F +L M+ERNV + T +++
Sbjct: 178 VVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDS 237
Query: 125 VFR--CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ R C+D + L + ME + + +V N+L+ L ++ A +L+ M R
Sbjct: 238 LCRDGCIDAAIS---LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P TF+ + V L E + I RG+ P TY LM+ R E +
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L+ + +++ ++ ++ +I +C V +D ++ R + R + N VT++ L+ G C
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ ++ EL ++ G PD T+ ++D LC + E AL+ ++ + + +
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y +I +C G V + LF + + P++ T+ +I C+ + +A M
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
G P++ +Y+ LI+A ++ G + + M+ G + D+ + ++++ L+
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 590
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+DA+ EM+ P + ++ ++ L ++++ + I+ +IYT N +
Sbjct: 70 DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I FCR K A ++ LG PD +++ LI L G+ +A M +NGC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGC 189
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
PD T N I+ + + G A D+++ +ER + F
Sbjct: 190 QPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVF 229
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS G+ + Y+ ++ +S I LA FQ+M PD TY IL+ G+C G
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++AL + + ++ + YT +I+G C +V + + + + + V PN T
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ + +A LL + E NTL+ + + +A ++ +M G
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Query: 181 YLPESSTFDYTVTCLVTG 198
+ ++S+ + L++G
Sbjct: 574 FSADASSIKMVIDMLLSG 591
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 230/494 (46%), Gaps = 2/494 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP+ YN+ I+A + ++A ++M+ + PD +YN I R G +
Sbjct: 175 GVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERV 234
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+++M +G P+ TY +I G + E VL M + + P + +
Sbjct: 235 IGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRA 294
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
R +A E+L R ME + +T ++ + + + +L +M RG P
Sbjct: 295 CGRSGRWKEAVEVL-RQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAP 353
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ F+ + G + +L G+ P +++ + A K+GR E L
Sbjct: 354 NTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELL 413
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ RL + SYN I+ K + A E+ R+M + + PN+++ N I +
Sbjct: 414 KEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGER 473
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ ELL + G P+ T+NS I + ++E ALD L++M E + P++ITY
Sbjct: 474 GRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITY 533
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N I + G ++ L ++M ++PD+ ++ A I ++ + + E+A + M T
Sbjct: 534 NSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPT 593
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL P+ +Y+++IKA + G +++A +++ PD + NL + ++GR+EE
Sbjct: 594 KGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEE 653
Query: 484 AHDIVKTSKERGIS 497
A D+++ G++
Sbjct: 654 ALDLLREMPAEGLT 667
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 225/498 (45%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G++P YN+VI K A +MS P+ +YN+ I R G E
Sbjct: 244 VGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKE 303
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ +++QME G P+V +Y I + +L+ M R V PN S +
Sbjct: 304 AVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIV 363
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ KA ELL N+ + + + EA +L++M + P
Sbjct: 364 ACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKP 423
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ +++ + G + +G+ P + + + A + GR EG L
Sbjct: 424 DAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELL 483
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ L NV +YN I K ++A ++ +M++ + P+ +T+N+ I+ K
Sbjct: 484 RQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKR 543
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ LL + G PD ++ + ID + ++E A++ L +M G+ PN ITY
Sbjct: 544 GRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITY 603
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N +I++ G+ ++L L ++++ ++PD+ ++N I + + + E+A M
Sbjct: 604 NSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPA 663
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL PD SY++ I+A G +++A M +G +P + + +L +E + GR EE
Sbjct: 664 EGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREE 723
Query: 484 AHDIVKTSKERGISFKSF 501
A +V+ +RG+S ++
Sbjct: 724 AVCLVREMAQRGLSHRNI 741
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 193/437 (44%), Gaps = 2/437 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P Y+A I A + + +M+ P+ +N I + G ++A
Sbjct: 315 GVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKA 374
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L++++ LG P+ ++ I + R E +L+ M + + P+ + S +
Sbjct: 375 VELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEA 434
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL-SNNSMASEAAAILRKMGDRGYLP 183
+ A EL R M + LT ++ + + R E +LR+M +G P
Sbjct: 435 CGKGGQWEMALELR-RQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTP 493
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + G + +L + + P TY + A K GR E L
Sbjct: 494 NVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALL 553
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ L +V SY ID + K +RA E+ R+M + + PN++T+N++I +
Sbjct: 554 REMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRG 613
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E K +LL L E PD ++N I + R+E+ALD L EM G+ P+ I+Y
Sbjct: 614 GEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISY 673
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
IR+ A G+ ++L L M A +SP +++ I++ + + E+A M
Sbjct: 674 TSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQ 733
Query: 424 LGLRPDNFSYSALIKAL 440
GL N S S +++AL
Sbjct: 734 RGLSHRNISNSLIVEAL 750
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 132/375 (35%), Gaps = 70/375 (18%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ LG++P +N+ I A KS A ++M + KPD +YN I + G
Sbjct: 381 VTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQ 440
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ AL L +QM G PNV + I I R E +L M + + PN T S
Sbjct: 441 WEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNS 500
Query: 121 LVHGVFRCLDPHKAFELLIRFME------------------------------REPLTQK 150
+ + KA +LL + E RE Q
Sbjct: 501 AIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQG 560
Query: 151 LVCNTLLYRLS-----NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
L + + Y + N A +LR+M +G P T++ + G + +
Sbjct: 561 LTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKAL 620
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGR------------------------------ 235
+L + V P +Y L + A K GR
Sbjct: 621 DLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRAC 680
Query: 236 DVEGD-----RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
+ EG+ LN + + SY++ I+ K + A + REM R ++
Sbjct: 681 NAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLSHRN 740
Query: 291 VTFNTLISGHCKDAE 305
++ + ++ DA+
Sbjct: 741 ISNSLIVEALGDDAK 755
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM-QADRISPDIYTF 398
++ +AL L EM E GV +Y I + G ++L L +++ + + +SP+++ +
Sbjct: 125 KWREALGILDEMKEGGVV-CAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCY 183
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
N+ I++ ++ E A M + PD SY++ IKA + G+++ M
Sbjct: 184 NSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPS 243
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
G PD+ T N ++ ++G+++EA ++ +G++ ++
Sbjct: 244 VGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETI 286
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 231/497 (46%), Gaps = 10/497 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI PS+ ++D LVK+ + F + +P +F Y I ++ V +
Sbjct: 139 GIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKG 198
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M+ P+V+ Y +LIDG C KR+ + ++ + M R + P+ T +L+ G
Sbjct: 199 LELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDG 258
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ +P K+F++ R M+ + + L+ NTLL L M +A +L++M D G++P
Sbjct: 259 YCKAGNPEKSFKVRER-MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVP 317
Query: 184 ESSTFDYTVTCLVTGLDLNETC----GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
++ TF + L G NE G+ +T + GVK T +L+ AL K G+ +
Sbjct: 318 DAFTF----SILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA 373
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ L LV N YN +ID +C+ + A M + + P+ + +N LI
Sbjct: 374 EEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRR 433
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
C+ E+ + + + G P T+N +I R + F+ D L EM + G PN
Sbjct: 434 FCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPN 493
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
++Y LI LC + + + + M+ +SP + +N LI C KIE A +
Sbjct: 494 VVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSK 553
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
ML G+ + +Y+ LI L +G+ EA+ L + + G PD +T N ++ G
Sbjct: 554 EMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAG 613
Query: 480 RFEEAHDIVKTSKERGI 496
+ + + K GI
Sbjct: 614 NVQRCIALYEEMKRSGI 630
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 131/524 (25%), Positives = 239/524 (45%), Gaps = 41/524 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS YN +ID K+ + + ++ ++M D +P T+N L+ G+ + G+V++A +
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+K+M+ LG+ P+ +T++IL DG+ + ++ V E + V N T L++ + +
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLL-----------YRLSNNSMASE-------- 168
KA E+L R M + + +++ NT++ R+ +M +
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426
Query: 169 ----------------AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
A + KM +G P T++ + + ++ IL
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS-NVNSYNMVIDCFCKVNMM 271
G P +Y L+ L K + +E + + +DR VS V YNM+ID C +
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEA-QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
+ A +EM + I NLVT+NTLI G ++ + +LL+ + G KPD FT+NS+
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSL 605
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
I A + + EM G+ P TY++LI SLC + + RLF +M +
Sbjct: 606 ISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMS---L 661
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
PD+ +N ++ + +EKA M+ + D +Y++LI +K G+ E +
Sbjct: 662 KPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRS 721
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
M P++ T N+I++ + + A+ + +E+G
Sbjct: 722 LIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKG 765
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 157/338 (46%)
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
L+ + M SEAA + + + G P S + + LV T + ++ +P
Sbjct: 119 LNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 178
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
Y ++A K +G N + DR+ +V YN++ID CK M+ A ++
Sbjct: 179 KFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFD 238
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
EM R + P+L+T+NTLI G+CK K+ ++ + +P TFN+++ L +A
Sbjct: 239 EMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAG 298
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
EDA + L EM + G P+ T++IL + +L +++ + + YT +
Sbjct: 299 MVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCS 358
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
L+ + C+ KIEKAE+ + GL P+ Y+ +I + G A+ +ME+
Sbjct: 359 ILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ 418
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G PD N ++ + G E A V K +G+S
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVS 456
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 110/488 (22%), Positives = 208/488 (42%), Gaps = 5/488 (1%)
Query: 15 AVIDALVKSNSIDLAYLK--FQQMSVDQ--CKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
V+ +L++S+S A K F S+ K D F+Y +L + ++ EA L
Sbjct: 76 GVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHD-FSYLLLSVLLNESKMISEAADLFFA 134
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
+ G P+ + T+L+D K+ V + E + P++ + + D
Sbjct: 135 LRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD 194
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
K EL R + N L+ L ++A + +M R LP T++
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ + ++ + + ++P T+ L++ L+KAG + + L +
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
V + +++++ D + + A + D + N T + L++ CK+ ++ K
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
E+L + G P++ +N+MID CR A + M + G+ P+ + YN LIR
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C +G++ + + KM+ +SP + T+N LI + R + +K M G P+
Sbjct: 435 CELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNV 494
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
SY LI L K + EA+ ME G +P N++++ +G+ E+A K
Sbjct: 495 VSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKE 554
Query: 491 SKERGISF 498
++GI
Sbjct: 555 MLKKGIEL 562
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 157/366 (42%), Gaps = 39/366 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SPS YN +I + D + ++M + P+ +Y LI+ +C+ + EA
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + ME G +P V Y +LIDG C+ ++ + FR + M ++ + N T +L+ G
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +T KL SEA +L ++ +G P+
Sbjct: 574 L--------------------SMTGKL---------------SEAEDLLLEISRKGLKPD 598
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ ++ ++ + + + G+KP TY LL+ K G ++ +
Sbjct: 599 VFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGE 658
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
K L+ YN V+ C+ M++A + ++M ++ I + T+N+LI G K
Sbjct: 659 MSLKPDLL----VYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVG 714
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + R L+ + +P+ T+N ++ C + A EM E G + N
Sbjct: 715 KLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGN 774
Query: 365 ILIRSL 370
L+ L
Sbjct: 775 ELVSGL 780
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 109/232 (46%)
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
M+ A ++ +R+ I P+ + L+ K + T + + +LE F+P KF +
Sbjct: 124 MISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYG 183
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
I + L+ + M + P+ YN+LI LC + + +LF +M A
Sbjct: 184 KAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR 243
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
R+ P + T+N LI +C+ EK+ K M + P +++ L+K L K+G ++A
Sbjct: 244 RLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDA 303
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ M+ G PD++T +++ + + E A + +T+ + G+ ++
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAY 355
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 51/122 (41%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ + P +YN V+ ++ A+ +QM D+ TYN LI G ++G + E
Sbjct: 659 MSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCE 718
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L+ +M P TY I++ G C K + M+E+ + LV
Sbjct: 719 VRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVS 778
Query: 124 GV 125
G+
Sbjct: 779 GL 780
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/487 (26%), Positives = 224/487 (45%), Gaps = 38/487 (7%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD--QCKPDRFTYNILIHGICRI 58
+S L P YN VI +L + A Q+M+ + +C PD ++N +IHG +
Sbjct: 186 MSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 245
Query: 59 GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
G V +A L +M G P+V TY ++D C A+ + + VL M ++ V P+ T
Sbjct: 246 GEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTY 305
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
+++HG + C K E+A + RKM
Sbjct: 306 NAIIHG-YSCSGHWK----------------------------------ESAKMFRKMTS 330
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+G +P++ TF ++ L + I +G P +Y +L+ GR +
Sbjct: 331 KGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFAD 390
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + +VSN + N++I K MMD A + EM+ + + PN+VT++TLIS
Sbjct: 391 MNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLIS 450
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP- 357
C+ + E ++ G +P+ ++S+I C A + +SEM+ G+
Sbjct: 451 AFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHR 510
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
PN + ++ +I SLC G V + +F + P I TFN+LI +C + K+EKA
Sbjct: 511 PNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGV 570
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
+M+++G+ PD + + L+ KSG+ D+ F M P + T N++L+ L++
Sbjct: 571 LDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLR 630
Query: 478 QGRFEEA 484
GR A
Sbjct: 631 AGRTSAA 637
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/524 (24%), Positives = 229/524 (43%), Gaps = 44/524 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN+++DAL K+ ++D A +QM +PD TYN +IHG G E+
Sbjct: 262 GVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKES 321
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ ++M G P+ T++ + C R + + + M + P+ + L+HG
Sbjct: 322 AKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHG 381
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ L M + + C N L+ + M EA + +M +G P
Sbjct: 382 -YATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRP 440
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ ++ L + I G++P + Y L+ G V+ ++
Sbjct: 441 NVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFI 500
Query: 244 NHVFKDRLV-SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + L N+ ++ +I C + A ++ + P +VTFN+LI G+C
Sbjct: 501 SEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCL 560
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ K +L ++ G +PD T N+++ C++ + +D L EM+ V P T+T
Sbjct: 561 VGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVT 620
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR--------------- 407
YNI++ L G + + ++F +M + DI T+ L++ CR
Sbjct: 621 YNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLG 680
Query: 408 -----------------MNKIEKAEKA---FFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ K+ + E+A F ++ T GL P+ +Y +I+ L+K G +
Sbjct: 681 AMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVE 740
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
EA F SME++GC P S N I+ L+Q+G DIVK
Sbjct: 741 EADTMFSSMEKSGCAPSSRLLNDIIRMLLQKG------DIVKAG 778
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 200/431 (46%), Gaps = 13/431 (3%)
Query: 66 RLVKQMEGLGYAP-NVYTYTILIDGFCNAKR----VAEVFRVLEIMKERNVCPNEATVRS 120
R+ ++ G AP V TY IL+D C A+R A V R+L + ++
Sbjct: 109 RICREEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKC 168
Query: 121 LVHGVFRCLDPHKAFELLI-RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
L H +A ++L+ R E + + NT++ L +S + EA ++++M
Sbjct: 169 LCHAK----RTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKE 224
Query: 180 GY--LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
G P+ +F+ + ++++ C + + +++GV P TY +++AL KA
Sbjct: 225 GGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMD 284
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ + L + + + +YN +I + + ++ R+M + + P+ VTF++ +
Sbjct: 285 KAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFM 344
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
S CK E+ + G PD +++ ++ RF D + M + G+
Sbjct: 345 SSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIV 404
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
N NILI + G + ++ +F +MQ + P++ T++ LI +FCRM ++ A +
Sbjct: 405 SNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEK 464
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN-PDSYTSNLILETLV 476
F M+++G+ P+ Y +LI G +AK+ M G + P+ + I+ +L
Sbjct: 465 FSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLC 524
Query: 477 QQGRFEEAHDI 487
+GR +A D+
Sbjct: 525 IEGRVMDAQDV 535
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 182/395 (46%), Gaps = 16/395 (4%)
Query: 116 ATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTL--LYRLSNNSMASEAAAIL 173
A + + G F D H F+ L+R + P+ + + + L L R ++ S A++
Sbjct: 46 AAIARVRAGTFCTDDAHHLFDELLR--QGTPVHNRSLNDFLAALARAPDSVSCSNGPALV 103
Query: 174 RKMGDRGYLPESSTFDYTVTCLVTGLDLNETC---------GILDTFIKRGVKPRFSTYL 224
+ +R E+ +T G+ ++ C + ++ G+K
Sbjct: 104 LALFNRICREEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQAT 163
Query: 225 LLMEALYKAGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
++ L A R E D L+ + + V + SYN VI C + A ++ + M
Sbjct: 164 TFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAK 223
Query: 284 RD--IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+P++V+FNT+I G K EV K L +++ G PD T+NS++D LC+A
Sbjct: 224 EGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAM 283
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+ A L +MV+ GV P+ +TYN +I G S ++F+KM + + PD TF++
Sbjct: 284 DKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSF 343
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
+ S C+ + + AE+ F M T G PD SYS L+ GRF + F SM G
Sbjct: 344 MSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGI 403
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ + N+++ ++G +EA + + +G+
Sbjct: 404 VSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGV 438
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 176/410 (42%), Gaps = 7/410 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + N +I A K +D A L F +M +P+ TY+ LI CR+G + +A
Sbjct: 402 GIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADA 461
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVH 123
+ QM +G PN Y LI GFC + + + M + + PN S++H
Sbjct: 462 MEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIH 521
Query: 124 GV---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ R +D F L+I +R + + N+L+ +A +L M G
Sbjct: 522 SLCIEGRVMDAQDVFNLVIHIGDRPTI---VTFNSLIDGYCLVGKMEKAFGVLDAMVSVG 578
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T + V+ +++ + + + VKP TY ++++ L +AGR
Sbjct: 579 IEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAK 638
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + ++++Y +++ C+ ++ D A + ++ D ++ NT+I+
Sbjct: 639 KMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINAL 698
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K + +L + G P+ T+ MI L + E+A S M + G P++
Sbjct: 699 YKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSS 758
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
N +IR L GD+ ++ K+ IS + T + L+ F K
Sbjct: 759 RLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGK 808
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/489 (25%), Positives = 226/489 (46%), Gaps = 8/489 (1%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
PS +NA++ K S+D+A F M PD ++YNIL+HG+C G ++EAL
Sbjct: 267 GPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALE 326
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
ME G P++ TY IL +GF ++ ++V++ M + P+ T L+ G
Sbjct: 327 FTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHC 386
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + ++F+L + + + + LL L + EA +L +M G P+
Sbjct: 387 QMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLL 446
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + E + + + + P ++ L++ G E Y + V
Sbjct: 447 TYSRGA--------VEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSV 498
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K + + YN++ID + K+ + A +++ ++ I+P +VTFN+LI G CK ++
Sbjct: 499 TKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKL 558
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ +LL + G P T+ ++++ C D L EM + P ITY ++
Sbjct: 559 AEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVV 618
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
++ LC G + S++L + M A + PD T+N +IQSFC+ + ++KA + ML L
Sbjct: 619 VKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSL 678
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+P +Y+ LI L G +A + ++++ I++ +G + A
Sbjct: 679 QPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALV 738
Query: 487 IVKTSKERG 495
ERG
Sbjct: 739 FFHQMVERG 747
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 206/461 (44%), Gaps = 10/461 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN + + I A+ Q+M ++ PD TY ILI G C++G ++E+
Sbjct: 335 GVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEES 394
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV-RSLVH 123
+L ++M G ++ TYT+L+ C + R+ E +L M+ + P+ T R V
Sbjct: 395 FKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVE 454
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+A EL + VC+ ++ L SEA +
Sbjct: 455 ---------EAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAE 505
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
E ++ + ++ E I++G+ P T+ L+ K G+ E + L
Sbjct: 506 EIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLL 565
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + LV +Y +++ +C+ M ++ EM + I P +T+ ++ G CK+
Sbjct: 566 DTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKE 625
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+H++ +LL + G PD+ T+N++I C+AH + A ++M++ + P+ +TY
Sbjct: 626 GRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTY 685
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+LI LC G++ + RL +Q I + +I++ C ++ A F M+
Sbjct: 686 NVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVE 745
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
G YSA+I L K +AK F M +G PD
Sbjct: 746 RGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPD 786
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/523 (20%), Positives = 226/523 (43%), Gaps = 36/523 (6%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L + S YN+++ L + D+ + + ++ + +T ILI G+CR + +
Sbjct: 197 LNLQVSIATYNSLLYNLRHT---DIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQD 253
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ +++ G + P+V ++ L+ GFC V +M + + P+ + L+H
Sbjct: 254 AVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLH 313
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL---YRLSNNSMASEAAAILRKMGDRG 180
G+ +A E ME + +V +L +R+ + S A ++++M G
Sbjct: 314 GLCVAGSMEEALE-FTNDMENHGVEPDIVTYNILANGFRIL--GLISGAWKVVQRMLLNG 370
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T+ + ++ E+ + + + +G+K TY +L+ +L K+GR E
Sbjct: 371 LNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAV 430
Query: 241 RYLNHVFKDRLVSNVNSY---------------------------NMVIDCFCKVNMMDR 273
L+ + L ++ +Y + +I + +
Sbjct: 431 ILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISE 490
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + D+A ++ +N +I G+ K + + ++E G P TFNS+I
Sbjct: 491 AQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIY 550
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
C+ + +A+ L + G+ P ++TY L+ C GD+ + +M+A I P
Sbjct: 551 GFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKP 610
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
T+ +++ C+ ++ ++ + M GL PD +Y+ +I++ K+ +A Q
Sbjct: 611 TQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLH 670
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M Q+ P T N+++ L G ++A ++ T +++ I
Sbjct: 671 NQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSI 713
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 137/266 (51%), Gaps = 9/266 (3%)
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
D+ D Y N + + N + ++ID C+ + + A RE + P++V+FN
Sbjct: 217 DIMWDVY-NEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNA 275
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
L+SG CK V + M+++ G PD +++N ++ LC A E+AL+ ++M G
Sbjct: 276 LMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHG 335
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
V P+ +TYNIL +G ++ + ++ Q+M + ++PD+ T+ LI C+M IE++
Sbjct: 336 VEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESF 395
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
K ML+ GL+ +Y+ L+ +L KSGR DEA ME G PD T +
Sbjct: 396 KLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS------ 449
Query: 476 VQQGRFEEAHDIVKTSKERGISFKSF 501
+G EEA ++ + + I SF
Sbjct: 450 --RGAVEEAIELYEEMCSKRIYPNSF 473
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 32/185 (17%)
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNI------------------------------- 365
RA DAL L++M + + TYN
Sbjct: 180 RAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKASGVPQNEYTNP 239
Query: 366 -LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI LC + ++ ++ + P + +FNAL+ FC+M ++ A+ F M+
Sbjct: 240 ILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKY 299
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL PD +SY+ L+ L +G +EA + ME +G PD T N++ G A
Sbjct: 300 GLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGA 359
Query: 485 HDIVK 489
+V+
Sbjct: 360 WKVVQ 364
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 233/477 (48%), Gaps = 2/477 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ-CKPDRFTYNILIHGICRIG 59
+S G++P YN +ID ++ A ++++ + P TYNI+I+G+C++G
Sbjct: 210 MSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLG 269
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+DE++ + +M+ +P+++T++ +I G A +V + M E + P+ T
Sbjct: 270 KLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYN 329
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+++ G+FR +K FEL M + + N L+ L +N +A + + +R
Sbjct: 330 AMLSGLFRTGKLNKCFELW-NVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHER 388
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G +S+T+ + L LN+ IL+ G Y ++ L K G +
Sbjct: 389 GLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQA 448
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
++ + K+R N + +N +I+ + + ++ A + REM+ +D AP +V++NT+I+G
Sbjct: 449 VELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIING 508
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK L +LE G KPD T++ +ID LCR + + AL+ + + + P+
Sbjct: 509 LCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPD 568
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+NI+I LC V +L +F +M+ PD+ T N +++ + +A K +
Sbjct: 569 LQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWD 628
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
+L GL+PD SY+ K L R +A + G P++ T N+++ +V
Sbjct: 629 RILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVV 685
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 137/569 (24%), Positives = 251/569 (44%), Gaps = 76/569 (13%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILI-------- 52
+ G +P R +N++++A ++SN A L F P+ TYNILI
Sbjct: 105 VDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQ 164
Query: 53 ---------------------------HGICRIGVVDEALRLVKQMEGLGYAPNVYTYTI 85
+ + + G + +A+ L +M G P+V Y I
Sbjct: 165 FEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNI 224
Query: 86 LIDGFCNAKRVAEVFRVLEIMK----ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF 141
LIDGF R + + EI K E +V P+ T +++G+ + ++ E+ R
Sbjct: 225 LIDGFL---RKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRM 281
Query: 142 MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLV-TG-- 198
+ E +++++ LS + A + ++M + G P+ T++ ++ L TG
Sbjct: 282 KKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKL 341
Query: 199 ---------LDLNETC----------GILDT------------FIKRGVKPRFSTYLLLM 227
+ N C G+LD +RG+K +TY LL+
Sbjct: 342 NKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLI 401
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
L K G + R L + + +Y+ ++ CK M+++A E+ +M+
Sbjct: 402 NGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRK 461
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
N FN+LI+G+ + ++ + +L + P ++N++I+ LC+A RF DA
Sbjct: 462 LNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLS 521
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
L EM+E G+ P+ ITY++LI LC V +L L+ + R+ PD+ N +I C
Sbjct: 522 LKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCT 581
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
K++ A + F M + PD +++ +++ L K+G EA + + + + G PD +
Sbjct: 582 AQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIIS 641
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERGI 496
N+ + L R +A + + + +RGI
Sbjct: 642 YNITFKGLCSCARVSDAIEFLYDALDRGI 670
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 118/239 (49%), Gaps = 2/239 (0%)
Query: 261 VIDCFCKVNMMDRATEICREMRDR-DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
I + K +M D+A + + M D P + +FN++++ + + +
Sbjct: 84 AIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTA 143
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G P+ T+N +I C+ +FE L+ M E G+ P+ ++Y LI +L G++ +
Sbjct: 144 GMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDA 203
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT-LGLRPDNFSYSALIK 438
+ LF +M ++PD+ +N LI F R KA + + +LT + P +Y+ +I
Sbjct: 204 VELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMIN 263
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
L K G+ DE+ + + M++N +PD +T + ++ L + G F A + + E G+S
Sbjct: 264 GLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLS 322
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 1/161 (0%)
Query: 330 SMIDCLCRAHRFEDALDCLSEMVE-WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
S I + + AL+ MV+ +G P ++N ++ + + F Q
Sbjct: 83 SAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQT 142
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+SP++ T+N LI+ C+ + EK + M GL PD SY LI AL KSG +
Sbjct: 143 AGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLD 202
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
A + F M G NPD N++++ +++G F +A++I K
Sbjct: 203 AVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWK 243
>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
Length = 466
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 236/466 (50%), Gaps = 16/466 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ ++P T YN V+ L + + A +M ++C P+ T+ I C+ G++D
Sbjct: 1 MPVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDR 60
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM--KERNVCPNEATVRSL 121
A++L+ QM G P+V Y+ LI+GF V + +L M K VC N A
Sbjct: 61 AVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAA----- 115
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ G+ EL+ + + + + L+ L N++ A +L +M G
Sbjct: 116 LKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGC 175
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P++ ++ + L +++ +L++ + KP + +++ +A R +
Sbjct: 176 EPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASE 232
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ +F+D ++N++ID C+ +++ AT++ +M P++VT+++L++G
Sbjct: 233 LIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFS 292
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ V +L + KPD F++N+++ LCRA R+EDA + ++EMV PPN +
Sbjct: 293 EQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEV 349
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
T+NILI SLC G V R++ + ++M +PDI+T+NALI F +++ A K +
Sbjct: 350 TFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKL---L 406
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
T+ +PD SY++ +K L ++ R+ +A++ M +N C P+ T
Sbjct: 407 STMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVT 452
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 168/358 (46%), Gaps = 13/358 (3%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+T YNA + L + + +M C P+ T+++LI +C+ +VD A+ +
Sbjct: 107 PNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEV 166
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVHGVF 126
++QME G P+ Y I+I+ RV + R+L M VC P+ +++ G
Sbjct: 167 LEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSM----VCKPDALGFNAVLKGFC 222
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
R H A EL+ + + ++ N L+ L N + + A + +M P+
Sbjct: 223 RAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIV 282
Query: 187 TFDYTVTCLVTGLDLNETCGI-LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + L+ G + + F KP +Y +++ L +A R + +
Sbjct: 283 TY----SSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAE 338
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ N ++N++I+ C+ ++DRA E+ +M + P++ T+N LI+G +
Sbjct: 339 MVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGR 398
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ +LL + KPD ++NS + LCRA R++DA + ++EM+ PN +T+
Sbjct: 399 LDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 453
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 190/427 (44%), Gaps = 13/427 (3%)
Query: 77 APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFE 136
AP+ YTY ++ G C AK+ E ++ M PNE T + + + +A +
Sbjct: 4 APDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQ 63
Query: 137 LLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCL 195
LL + M R T +V +TL+ S +A +L M + P + ++ + L
Sbjct: 64 LLDQ-MPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCK---PNTVCYNAALKGL 119
Query: 196 VTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNV 255
+ ++ +++G P +T+ +L+ +L + L + K +
Sbjct: 120 CIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDT 179
Query: 256 NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
+YN++I+ + +D A + M + P+ + FN ++ G C+ H EL+
Sbjct: 180 VNYNIIINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQ 236
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
+ + TFN +ID LC+ A +M + P+ +TY+ L+ G
Sbjct: 237 MFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGL 296
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
V +++LF+ M PDI+++NA+++ CR + E A + M+ P+ +++
Sbjct: 297 VEVAIQLFRSMPC---KPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNI 353
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT--SKE 493
LI +L + G D A + M G PD +T N ++ +QGR ++A ++ T K
Sbjct: 354 LINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCKP 413
Query: 494 RGISFKS 500
IS+ S
Sbjct: 414 DAISYNS 420
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 32/148 (21%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YNAV+ L ++ + A +M C P+ T+NILI+ +C+ G+VD A+ +
Sbjct: 311 PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEV 370
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK-------------------- 107
++QM G P+++TY LI+GF R+ + ++L M
Sbjct: 371 LEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCKPDAISYNSTLKGLCRAER 430
Query: 108 -----------ERNVC-PNEATVRSLVH 123
RN C PNE T + H
Sbjct: 431 WQDAEELVAEMLRNKCTPNEVTFKYANH 458
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%)
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
++PD YT+N +++ C K E+AE+ M+ P+ +++ I++ ++G D A
Sbjct: 3 VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 62
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
Q M + GC PD + ++ +QG ++A D++ T
Sbjct: 63 QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNT 102
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 234/480 (48%), Gaps = 3/480 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P +N ++ +LVK N +A QQM + +P+ FT+NILI+ + ++ A
Sbjct: 50 TPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFS 109
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+V ++ LGY P+ T L+ G C +V E + + + ++ + +L++G+
Sbjct: 110 MVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLC 169
Query: 127 RCLDPHKAFELLIRFMEREPLTQK--LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A +LL R +E L + ++ ++ + + +A + +M + P
Sbjct: 170 KSGETRAALQLL-RKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPN 228
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + L E G+L+ V P T+ +L++ L K G + L+
Sbjct: 229 VVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLS 288
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K + NV +Y ++D + V +++A + + R + PN+ +++ +I+G CK+
Sbjct: 289 VMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNK 348
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V + +L + P+ T++S+ID LC++ R D D + E+ G P N ITYN
Sbjct: 349 MVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYN 408
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ LC V +++ L KM+ + I PD+ T+ L+ C+ +++ A++ + +L
Sbjct: 409 SLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCK 468
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G + Y+ +I L K G FDEA ME NGC PD+ T ++ L + + +A
Sbjct: 469 GYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKA 528
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 195/422 (46%), Gaps = 3/422 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSV-DQCKPDRFTYNILIHGICRIGVVD 62
LG P T N ++ L + + A L F + + D+ +Y LI+G+C+ G
Sbjct: 117 LGYQPDTVTVNTLLRGLCLNGKVKEA-LNFHDHVIRKRFHLDQVSYGTLINGLCKSGETR 175
Query: 63 EALRLVKQMEGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
AL+L++++EGL P+V YT +ID FC K V + + + M + + PN T SL
Sbjct: 176 AALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSL 235
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++G +A LL N L+ L +A ++L M +G
Sbjct: 236 IYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGV 295
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P T+ + ++N+ + +T RGV P +Y +++ L K E +
Sbjct: 296 EPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVK 355
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + N +Y+ +ID CK + ++ E+ +R N++T+N+L++G C
Sbjct: 356 LFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLC 415
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K+ +V K LL + + G +PD T+ +++D LC+ R +DA +++ G P N
Sbjct: 416 KNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIR 475
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y ++I LC G +L L +M+ + PD T+ LI + + NK KA K M
Sbjct: 476 MYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREM 535
Query: 422 LT 423
+
Sbjct: 536 IA 537
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 163/333 (48%), Gaps = 9/333 (2%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS----TYL 224
A +++ K+ GY P++ TV L+ GL LN F ++ RF +Y
Sbjct: 107 AFSMVAKILKLGYQPDT----VTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYG 162
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLV-SNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
L+ L K+G + L + LV +V Y +ID FCK ++ A ++ EM
Sbjct: 163 TLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIV 222
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
+ I PN+VTFN+LI G C ++ + LL + P+ +TFN +ID LC+ +
Sbjct: 223 KKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKK 282
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A LS M++ GV PN +TY L+ + +V ++ +F + ++P++++++ +I
Sbjct: 283 ATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMIN 342
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
C+ +++A K F M + P+ +YS+LI L KSGR + + G
Sbjct: 343 GLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPA 402
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ T N +L L + + ++A ++ K+ GI
Sbjct: 403 NIITYNSLLNGLCKNHQVDKAIALLTKMKDEGI 435
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 135/317 (42%), Gaps = 43/317 (13%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S ++P+ +N +ID L K + A M +P+ TY L+ G +
Sbjct: 255 MSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKE 314
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V++A + + G PNV++Y+++I+G C K V E ++ + M +N+ PN T S
Sbjct: 315 VNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSS 374
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G+ + ++L+ R + N+LL L N +A A+L KM D G
Sbjct: 375 LIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEG 434
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ STY L++ L K GR +
Sbjct: 435 IQPD-----------------------------------MSTYTTLVDGLCKNGRLKDAQ 459
Query: 241 RYLNHVFKDRLVS----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
R +++D L N+ Y ++I+ CK D A + +M D P+ VT+ TL
Sbjct: 460 R----IYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETL 515
Query: 297 ISGHCKDAEVHKTRELL 313
IS K+ + K +LL
Sbjct: 516 ISALFKNNKNGKAVKLL 532
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 116/242 (47%), Gaps = 1/242 (0%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
++N++I+CF + ++ A + ++ P+ VT NTL+ G C + +V + +
Sbjct: 90 TFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHV 149
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG-VPPNTITYNILIRSLCAIGD 375
+ F D+ ++ ++I+ LC++ AL L ++ V P+ I Y +I S C
Sbjct: 150 IRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKL 209
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
V + L+ +M +I P++ TFN+LI FC + ++++A M + P+ ++++
Sbjct: 210 VIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNI 269
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
LI L K G +A M + G P+ T +++ +A + T RG
Sbjct: 270 LIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRG 329
Query: 496 IS 497
++
Sbjct: 330 VT 331
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
+P I+ FN ++ S +MN + A M G++P+ F+++ LI + + A
Sbjct: 50 TPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFS 109
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA---HDIV 488
+ + G PD+ T N +L L G+ +EA HD V
Sbjct: 110 MVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHV 149
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 211/460 (45%), Gaps = 39/460 (8%)
Query: 40 QCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV 99
+C PD +YN +I G+ + G VD+A +M +P+ TY +I A+ +
Sbjct: 6 RCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRA 65
Query: 100 FRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
VL +M V PN T S++HG
Sbjct: 66 MEVLTVM----VMPNCFTYNSIMHG----------------------------------- 86
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
++ + +A I RKM G P+ T++ + L E I D+ +KRG+KP
Sbjct: 87 YCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPD 146
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
+TY L+ G VE L + ++ + + + +N++I + K +D +
Sbjct: 147 ITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFS 206
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
+MR + + PN V + T+I G CK + +++ G P+ + S+I LC
Sbjct: 207 KMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYD 266
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
++E A + + E+++ G+ PN + +N ++ SLC G V S +LF + ++PD+ T++
Sbjct: 267 KWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYS 326
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI +C K++ A K M+++GL+PD+ +YS LI K R ++A F ME N
Sbjct: 327 TLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESN 386
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
G NPD T N+IL L + R A ++ E G +
Sbjct: 387 GVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLE 426
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 212/439 (48%), Gaps = 10/439 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN +ID L K +D AY+ + +M + PD TYN +I + + +D A+ +
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV-- 125
+ M PN +TY ++ G+C++ + + + M + P+ T SL+ +
Sbjct: 69 LTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124
Query: 126 -FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+C + K F+ +++ + +T TLL+ ++ E +L M G +
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTY---GTLLHGYASKGALVEMHDLLALMVQNGMQLD 181
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F+ + ++E + ++G+ P Y +++ L K GR +
Sbjct: 182 HHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFE 241
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L NV Y +I C + ++A E+ E+ D+ I PN+V FNT++ CK+
Sbjct: 242 QMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEG 301
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V ++++L +L G PD T++++ID C A + + A+ L+ MV G+ P+++TY+
Sbjct: 302 RVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYS 361
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C I + +L LF++M+++ ++PDI T+N ++ R + A++ + +
Sbjct: 362 TLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITES 421
Query: 425 GLRPDNFSYSALIKALIKS 443
G + + +Y+ ++ K+
Sbjct: 422 GTQLELSTYNIILMDFAKT 440
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 191/406 (47%), Gaps = 4/406 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+SP YN++I AL K+ ++D A M + C FTYN ++HG C G ++A+
Sbjct: 42 VSPDAVTYNSIIAALSKAQAMDRAMEVLTVMVMPNC----FTYNSIMHGYCSSGQSEKAI 97
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ ++M G P+V TY L+D C + E ++ + M +R + P+ T +L+HG
Sbjct: 98 GIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGY 157
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ +LL ++ V N L+ + E + KM +G P +
Sbjct: 158 ASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNA 217
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+ + L L++ + I +G+ P Y L+ AL + + + +
Sbjct: 218 VNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFE 277
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + N+ +N ++D CK + + ++ + + P+++T++TLI G+C +
Sbjct: 278 ILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGK 337
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ +LL ++ G KPD T++++I+ C+ +R EDAL EM GV P+ ITYNI
Sbjct: 338 MDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNI 397
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
++ L A + L+ ++ ++ T+N ++ F + N +
Sbjct: 398 ILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSL 443
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 154/363 (42%), Gaps = 35/363 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P YN+++D L K+ A F M KPD TY L+HG G + E
Sbjct: 107 GIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEM 166
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G + + + ILI + ++V EV V M+++ + PN R+++ G
Sbjct: 167 HDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDG 226
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + L RL + + E +M D+G P
Sbjct: 227 LCK-----------------------------LGRLDDAMLNFE------QMIDKGLTPN 251
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + L T + ++ + +G+ P + ++++L K GR +E + +
Sbjct: 252 VVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFD 311
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +V +Y+ +ID +C MD A ++ M + P+ VT++TLI+G+CK
Sbjct: 312 LLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKIN 371
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ L + G PD T+N ++ L R R A + + + E G TYN
Sbjct: 372 RMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYN 431
Query: 365 ILI 367
I++
Sbjct: 432 IIL 434
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ +G++P Y+ +ID + +D A M KPD TY+ LI+G C+I
Sbjct: 313 LGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINR 372
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVA 97
+++AL L K+ME G P++ TY I++ G +R A
Sbjct: 373 MEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTA 409
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P + Y+ +I+ K N ++ A F++M + PD TYNI++HG+ R
Sbjct: 351 VGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAA 410
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGF 90
A L ++ G + TY I++ F
Sbjct: 411 AKELYARITESGTQLELSTYNIILMDF 437
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/520 (25%), Positives = 226/520 (43%), Gaps = 74/520 (14%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y +I L ++ + A + M D C P+ TY +LI G+C+ G + +A L+ +M
Sbjct: 256 YTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMP 315
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G P+V+TY +IDG+C + R+ + + +M+ P++ T SL+HG+ P
Sbjct: 316 RRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGG-KPD 374
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A ELL N ++A RG+ P TF +
Sbjct: 375 EAEELL-----------------------NGAIA------------RGFSPTVITFTNII 399
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+++ + I K Y +L+ L K R E LN +F + L
Sbjct: 400 NGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLS 459
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEI--------CR------------------------- 279
NV Y +ID +CKV + A E+ CR
Sbjct: 460 PNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMAL 519
Query: 280 --EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
+M++ I P ++T+ TLI G CK E L M+ + G PD+ +N + D LC+
Sbjct: 520 ITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCK 579
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
+ R E+A S +V+ GV +TY L+ G+ + L +KM + D +T
Sbjct: 580 SGRAEEAY---SFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHT 636
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
++ L+Q+ C+ K+ +A M G++ + +Y+ +I +IK G+ D AK F M
Sbjct: 637 YSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMI 696
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+G P + T + + + + GR EEA ++ + G++
Sbjct: 697 SSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVA 736
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 233/492 (47%), Gaps = 4/492 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P T YN +I A K S+ +A+ F+ + + D +T N L+ G CR G + +A
Sbjct: 178 GLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKA 237
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M +G N Y+YTILI G C + V E +L +M + PN T L+ G
Sbjct: 238 CWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRG 297
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + H A LL R + N ++ + +A I M G P+
Sbjct: 298 LCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPD 357
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L G +E +L+ I RG P T+ ++ KA + + R +
Sbjct: 358 DWTYNSLIHGLCGG-KPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKS 416
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++ +Y ++I K + + A + E+ ++PN+V + ++I +CK
Sbjct: 417 IMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVG 476
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V E+ + G +P+ +T++S+I L + + A+ +++M E G+ P ITY
Sbjct: 477 KVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYT 536
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI+ C + + RLF+ M+ + ++PD +N L + C K +AE+A+ ++
Sbjct: 537 TLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALC---KSGRAEEAYSFLVKK 593
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ +Y++L+ K+G + A M GC DS+T +++L+ L +Q + EA
Sbjct: 594 GVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEA 653
Query: 485 HDIVKTSKERGI 496
I+ RG+
Sbjct: 654 LSILDQMTLRGV 665
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/506 (24%), Positives = 225/506 (44%), Gaps = 19/506 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP+ +Y ++IDA K + A F+ + C+P+ +TY+ LI+G+ + + +A
Sbjct: 457 GLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKA 516
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M+ G P V TYT LI G C FR+ E+M++ + P+E L
Sbjct: 517 MALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDA 576
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A+ L++ + + K+ +L+ S AAA++ KM + G +
Sbjct: 577 LCKSGRAEEAYSFLVK---KGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKAD 633
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S T+ + L LNE ILD RGVK Y +++ + K G+ N
Sbjct: 634 SHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFN 693
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +Y + I +CK+ ++ A + EM +AP++VT+N I+G
Sbjct: 694 EMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMG 753
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMID-----CLCRAH-----------RFEDALDCL 348
+ L +++ +P+ +T+ ++ L AH + + L
Sbjct: 754 YMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLL 813
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
MV+ G+ P +TY+ +I C + + L M ISP+ + LI+ C +
Sbjct: 814 ERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDI 873
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
EKA +M+ G +P SY LI L G +D+AK F + + N +
Sbjct: 874 KLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAW 933
Query: 469 NLILETLVQQGRFEEAHDIVKTSKER 494
++ + L++ G + ++ + R
Sbjct: 934 KILNDGLLKAGHVDICSQLLSAMENR 959
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 203/473 (42%), Gaps = 4/473 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS YNA+ID KS + A M + C PD +TYN LIHG+C G DEA
Sbjct: 318 GVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCG-GKPDEA 376
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ G++P V T+T +I+G+C A+++ + RV IM + L+
Sbjct: 377 EELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISV 436
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A + L ++ +++ A + + G P
Sbjct: 437 LIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPN 496
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T+ + L+ L++ ++ + G+ P TY L++ K R
Sbjct: 497 AWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFE 556
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ L + +YN++ D CK RA E + + + VT+ +L+ G K
Sbjct: 557 MMEQNGLTPDEQAYNVLTDALCKSG---RAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAG 613
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
L+ ++ G K D T++ ++ LC+ + +AL L +M GV N + Y
Sbjct: 614 NTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYT 673
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+I + G + +F +M + P T+ I S+C++ +IE+A M
Sbjct: 674 IIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERN 733
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
G+ PD +Y+ I G D A T M C P+ +T L+L+ ++
Sbjct: 734 GVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLK 786
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 201/443 (45%), Gaps = 5/443 (1%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
YN+ + + R + + +L Q+ G P+ TY +I +C +A R +++
Sbjct: 151 YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLR 210
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
E + + T +L+ G R D KA LL+ + L+ L
Sbjct: 211 ESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVR 270
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
EA +L M G P T+ + L +++ +LD +RGV P TY ++
Sbjct: 271 EALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMI 330
Query: 228 EALYKAGR--DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
+ K+GR D G + L + + + +YN +I C D A E+ R
Sbjct: 331 DGYCKSGRLKDALGIKTL--MEGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARG 387
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
+P ++TF +I+G+CK ++ + +++ K D + +I L + HR ++A
Sbjct: 388 FSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAK 447
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
D L+E+ G+ PN + Y +I + C +G V +L +F+ + + P+ +T+++LI
Sbjct: 448 DTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGL 507
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
+ K+ KA M G+ P +Y+ LI+ K FD A + F MEQNG PD
Sbjct: 508 IQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDE 567
Query: 466 YTSNLILETLVQQGRFEEAHDIV 488
N++ + L + GR EEA+ +
Sbjct: 568 QAYNVLTDALCKSGRAEEAYSFL 590
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/507 (22%), Positives = 209/507 (41%), Gaps = 19/507 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP+ + +I+ K+ ID A M +CK D Y +LI + + + EA
Sbjct: 387 GFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEA 446
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ G +PNV YT +ID +C +V V ++ + PN T SL++G
Sbjct: 447 KDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYG 506
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + HKA L+ + E + TL+ A + M G P+
Sbjct: 507 LIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPD 566
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ L E L +K+GV TY L++ KAG +
Sbjct: 567 EQAYNVLTDALCKSGRAEEAYSFL---VKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIE 623
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++ ++Y++++ CK ++ A I +M R + N+V + +IS K+
Sbjct: 624 KMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEG 683
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + ++ G KP T+ I C+ R E+A + EM GV P+ +TYN
Sbjct: 684 KHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYN 743
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN--------------- 409
+ I +G + + ++M P+ +T+ L++ F +M+
Sbjct: 744 VFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNW 803
Query: 410 -KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
K++ + M+ GL P +YS++I K+ R +EA M +P+
Sbjct: 804 IKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIY 863
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERG 495
++++ FE+A V E G
Sbjct: 864 TMLIKCCCDIKLFEKAASFVTNMIECG 890
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 121/248 (48%), Gaps = 1/248 (0%)
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
RL + YN+ + + +M + ++ ++ + P+ VT+NT+I +CK+ +
Sbjct: 143 RLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIA 202
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+L E G + D +T N+++ CR A L M G N +Y ILI+
Sbjct: 203 HRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQG 262
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
LC V +L L M D SP+++T+ LI+ C+ +I A M G+ P
Sbjct: 263 LCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPS 322
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
++Y+A+I KSGR +A ME NGCNPD +T N ++ L G+ +EA +++
Sbjct: 323 VWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLN 381
Query: 490 TSKERGIS 497
+ RG S
Sbjct: 382 GAIARGFS 389
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 125/313 (39%), Gaps = 19/313 (6%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ G+ + Y +I ++K D A F +M KP TY + I C+IG
Sbjct: 660 MTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGR 719
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
++EA L+ +ME G AP+V TY + I+G + + F L+ M + + PN T
Sbjct: 720 IEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWT--- 776
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ LL++ + L +T + N +L +M G
Sbjct: 777 --------------YWLLLKHFLKMSLANAHYVDT--SGMWNWIKLDTVWQLLERMVKHG 820
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P + T+ + L E C +LD + + + P Y +L++ +
Sbjct: 821 LNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAA 880
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
++ ++ + ++ SY+ +I C D+A + ++ + D N V + L G
Sbjct: 881 SFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGL 940
Query: 301 CKDAEVHKTRELL 313
K V +LL
Sbjct: 941 LKAGHVDICSQLL 953
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 226/502 (45%), Gaps = 8/502 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P +N++I ++N +D+A F +M + D +Y LI G C G +DEA
Sbjct: 41 GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEA 100
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +M+ P+++ Y L+ G C A R E +L MKE P+ ++V
Sbjct: 101 VELFGEMD----QPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVD- 155
Query: 125 VFRCLD--PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
FRC + +A E+L E+ + C ++ S+A +L M RG
Sbjct: 156 -FRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCK 214
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T++ V +++ +L+ GV P TY LL+ G R
Sbjct: 215 PNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRL 274
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + D L+++ +YN +I+ CK D+A + + R I PN VTFN+LI+G CK
Sbjct: 275 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 334
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+V + L ++ G PD +T++S I+ LC+ ++ L + EM++ V P+T+
Sbjct: 335 SGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 394
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y I+I L + R + +M + +PD+ T+ ++++C ++ +AE M
Sbjct: 395 YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMS 454
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G+ D +Y+ L+ G+ D A M P+ +T ++L LV+ E
Sbjct: 455 KNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVE 514
Query: 483 EAHDIVKTSKERGISFKSFPGL 504
+ + + I GL
Sbjct: 515 DVLPLTPAGVWKAIELTDVFGL 536
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 212/489 (43%), Gaps = 39/489 (7%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YNAVI +L + + A M +PD +T+N LI G CR VD A L +M
Sbjct: 14 YNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G+A +V +Y LI+GFC R+ E + M + P+ +LV G
Sbjct: 74 LRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKG-------- 121
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
L E +LR+M + G+ P + + V
Sbjct: 122 ---------------------------LCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVV 154
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
E +L ++G+ P T ++ A K GR + R L +
Sbjct: 155 DFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCK 214
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
NV +YN ++ FC + +A + +MR + P+ VT+N LI G C D + L
Sbjct: 215 PNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRL 274
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L ++ G D++T+N++I+ LC+ R + A + G+ PN +T+N LI LC
Sbjct: 275 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 334
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G V + + +KM + +PD YT+++ I+ C+M ++ ML ++P +
Sbjct: 335 SGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 394
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y+ +I L+K + +T+ M +GCNPD T + +GR EA +++
Sbjct: 395 YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMS 454
Query: 493 ERGISFKSF 501
+ G++ +
Sbjct: 455 KNGVTVDTM 463
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 133/542 (24%), Positives = 225/542 (41%), Gaps = 62/542 (11%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG PSTR Y AV+D A Q+M P T +I+ C+ G + +
Sbjct: 141 LGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSD 200
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
ALR+++ M+ G PNV+TY L+ GFCN +V + +L M+ V P+ T L+
Sbjct: 201 ALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIR 260
Query: 124 GVFRCLDPH--KAFELLIRFMEREPL-TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
G +C+D H AF LL R ME + L + N L+ L + +A ++ + RG
Sbjct: 261 G--QCIDGHIESAFRLL-RLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 317
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P + TF+ + L ++ L+ + G P TY +E L K EG
Sbjct: 318 IKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 377
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
++ + + + + +Y +VI K EM P++VT+ T + +
Sbjct: 378 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAY 437
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C + +++ +L+ + + G D +N+++D + + A+ L +M PN
Sbjct: 438 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 497
Query: 361 ITYNILIRSLCAI----------------------------------------------- 373
TY IL+R L +
Sbjct: 498 FTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILE 557
Query: 374 -----GDVARSLRLFQKMQADRIS--PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
G + L M+ D IS DIYT AL+ FC+ + A SM+ G
Sbjct: 558 GFSEDGRTEEATSLVSLMKEDSISLNEDIYT--ALVTCFCKSKRYLDAWVLVCSMIQHGF 615
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P SY L+ LI G+ D+AK+ F++ +PD +I++ L+++G + + +
Sbjct: 616 IPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISRE 675
Query: 487 IV 488
++
Sbjct: 676 MI 677
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 195/488 (39%), Gaps = 17/488 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YNA++ + A +M V PD TYN+LI G C G ++ A
Sbjct: 212 GCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESA 271
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL++ MEG G + YTY LI+ C R + + + ++ R + PN T SL++G
Sbjct: 272 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLING 331
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A++ L + + ++ + L + E + + +M + P
Sbjct: 332 LCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPS 391
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + L+ + + G P TY M A GR E + L
Sbjct: 392 TVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLM 451
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI------- 297
+ K+ + + +YN ++D + D A I ++M PN T+ L+
Sbjct: 452 EMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 511
Query: 298 ----------SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
+G K E+ L ++ + F P+ T++S+++ R E+A
Sbjct: 512 LVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSL 571
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
+S M E + N Y L+ C + L M P + ++ L+
Sbjct: 572 VSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLIC 631
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ +KA++ F + PD + +I LIK G D +++ + +E+ C P T
Sbjct: 632 EGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQT 691
Query: 468 SNLILETL 475
++ E L
Sbjct: 692 YAMLTEEL 699
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN +IRSLC D+A +LR M PD YTFN+LI +CR N+++ A F M
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G D SY+ALI+ ++GR DEA + F M+Q PD + +++ L + GR
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRG 128
Query: 482 EEAHDIVKTSKERG 495
EE +++ KE G
Sbjct: 129 EEGLLMLRRMKELG 142
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 232/487 (47%), Gaps = 7/487 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS + Y++++ L K ID ++M KP+ +T+ I I + R G ++EA
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++K+M+ G P+V TYT+LID C A+++ V E MK P+ T +L+
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 125 VF--RCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMGDRGY 181
R LD K F ME++ +V T+L L EA L M D+G
Sbjct: 338 FSDNRDLDSVKQF---WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
LP T++ + L+ L++ + GVKP TY++ ++ K+G V
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + N+ + N + K A +I ++D + P+ VT+N ++ +
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K E+ + +LL ++E G +PD NS+I+ L +A R ++A M E + P +
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN L+ L G + ++ LF+ M P+ TFN L C+ +++ A K F M
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ +G PD F+Y+ +I L+K+G+ EA F M++ PD T +L +V+
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLI 693
Query: 482 EEAHDIV 488
E+A+ I+
Sbjct: 694 EDAYKII 700
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 130/535 (24%), Positives = 248/535 (46%), Gaps = 47/535 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ YN ++ L K+ I A F+ M C P+ T+N L +C+ V AL
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 628
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+++ +M +G P+V+TY +I G +V E MK + V P+ T+ +L+ GV
Sbjct: 629 KMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGV 687
Query: 126 FRCLDPHKAFELLIRFM---EREP-----------------------LTQKLVCNTLL-- 157
+ A++++ F+ +P +++LV N +
Sbjct: 688 VKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRD 747
Query: 158 ----------YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGI 207
Y +N+++ + D G P+ T++ + L+ D+ E
Sbjct: 748 GDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEA-DMIEIAQ- 805
Query: 208 LDTFIK---RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
D F++ G P +TY L++A K+G+ E + +N ++N+VI
Sbjct: 806 -DVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISG 864
Query: 265 FCKVNMMDRATEICRE-MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
K +D A ++ + M DRD +P T+ LI G K +++ ++L +L+ G +P
Sbjct: 865 LVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP 924
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
+ +N +I+ +A + A MV+ GV P+ TY++L+ LC +G V L F
Sbjct: 925 NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 984
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL-GLRPDNFSYSALIKALIK 442
++++ ++PD+ +N +I + +++E+A F M T G+ PD ++Y++LI L
Sbjct: 985 KELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGI 1044
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+G +EA + + +++ G P+ +T N ++ G+ E A+ + +T G S
Sbjct: 1045 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFS 1099
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 228/495 (46%), Gaps = 6/495 (1%)
Query: 4 LGISPSTRLYNAVIDAL-VKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
L + +T N +++AL V ++AY+ F M K D TY + + G +
Sbjct: 112 LNLVHTTETCNYMLEALRVDGKLEEMAYV-FDLMQKRIIKRDTNTYLTIFKSLSVKGGLK 170
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+A +++M G+ N Y+Y LI ++ E V M P+ T SL+
Sbjct: 171 QAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLM 230
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGY 181
G+ + D LL + ME L + T+ R L +EA IL++M D G
Sbjct: 231 VGLGKRRDIDSVMGLL-KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC 289
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG-D 240
P+ T+ + L T L+ + + KP TY+ L++ + RD++
Sbjct: 290 GPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR-FSDNRDLDSVK 348
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
++ + + KD V +V ++ +++D CK A + MRD+ I PNL T+NTLI G
Sbjct: 349 QFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGL 408
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ + EL + G KP +T+ ID ++ AL+ +M G+ PN
Sbjct: 409 LRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNI 468
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ N + SL G + ++F ++ + PD T+N +++ + ++ +I++A K
Sbjct: 469 VACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSE 528
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ G PD ++LI L K+ R DEA + F+ M++ P T N +L L + G+
Sbjct: 529 MMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK 588
Query: 481 FEEAHDIVKTSKERG 495
+EA ++ + ++G
Sbjct: 589 IQEAIELFEGMVQKG 603
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/487 (22%), Positives = 205/487 (42%), Gaps = 39/487 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ Y ID KS A F++M P+ N ++ + + G E
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 486
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ ++ +G P+ TY +++ + + E ++L M E P+ V SL++
Sbjct: 487 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN 546
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+++ +A+++ +R E + + NTLL L N EA + M +G P
Sbjct: 547 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 606
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF+ CL ++ +L + G P TY ++ L K G+
Sbjct: 607 NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ-------- 658
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
V + C + M + + P+ VT TL+ G K
Sbjct: 659 -----------------VKEAMCFFHQMKKL-----------VYPDFVTLCTLLPGVVKA 690
Query: 304 AEVHKTRELLV-MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + +++ L C +P + +I + ++A+ +V G+ + +
Sbjct: 691 SLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDS 750
Query: 363 YNI-LIRSLCAIGDVARSLRLFQKMQAD-RISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ +IR C +V+ + LF+K D + P + T+N LI + IE A+ F
Sbjct: 751 ILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQ 810
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+ + G PD +Y+ L+ A KSG+ DE + + M + C ++ T N+++ LV+ G
Sbjct: 811 VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870
Query: 481 FEEAHDI 487
++A D+
Sbjct: 871 VDDALDL 877
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 155/365 (42%), Gaps = 37/365 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P YN +I L++++ I++A F Q+ C PD TYN L+ + G +DE
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV-LEIMKERNVCPNEATVRSLV 122
L K+M N T+ I+I G A V + + ++M +R+ P T L+
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G LS + EA + M D G
Sbjct: 899 DG-----------------------------------LSKSGRLYEAKQLFEGMLDYGCR 923
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P + ++ + + + C + +K GV+P TY +L++ L GR EG Y
Sbjct: 924 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR-DRDIAPNLVTFNTLISGHC 301
+ + L +V YN++I+ K + ++ A + EM+ R I P+L T+N+LI
Sbjct: 984 FKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG 1043
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
V + ++ + G +P+ FTFN++I + + E A MV G PNT
Sbjct: 1044 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTG 1103
Query: 362 TYNIL 366
TY L
Sbjct: 1104 TYEQL 1108
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 159/343 (46%), Gaps = 2/343 (0%)
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
T+ LS +A LRKM + G++ + +++ + L+ E + I
Sbjct: 158 TIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILE 217
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDR-YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G +P TY LM L K RD++ L + L NV ++ + I + ++
Sbjct: 218 GFRPSLQTYSSLMVGLGKR-RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE 276
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A EI + M D P++VT+ LI C ++ +E+ + KPD+ T+ +++D
Sbjct: 277 AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD 336
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
+ SEM + G P+ +T+ IL+ +LC G+ + M+ I P
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
+++T+N LI R+++++ A + F +M +LG++P ++Y I KSG A +TF
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M+ G P+ N L +L + GR EA I K+ G+
Sbjct: 457 EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGL 499
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 149/320 (46%)
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
G+ + + T +Y + L L E + D KR +K +TYL + ++L G
Sbjct: 110 GNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGL 169
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
+ L + + V N SYN +I K A E+ R M P+L T+++L
Sbjct: 170 KQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSL 229
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ G K ++ LL + G KP+ +TF I L RA + +A + L M + G
Sbjct: 230 MVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC 289
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
P+ +TY +LI +LC + + +F+KM+ R PD T+ L+ F ++ ++
Sbjct: 290 GPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQ 349
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
+ M G PD +++ L+ AL K+G F EA T M G P+ +T N ++ L+
Sbjct: 350 FWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL 409
Query: 477 QQGRFEEAHDIVKTSKERGI 496
+ R ++A ++ + G+
Sbjct: 410 RVHRLDDALELFGNMESLGV 429
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 182/434 (41%), Gaps = 41/434 (9%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ--CKPDRFTYNILIHGICRIGVVDEAL 65
P+ + +I +++ ID A + F + V C+ +I C+ V A
Sbjct: 711 PANLFWEDLIGSILAEAGIDNA-VSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGAR 769
Query: 66 RLVKQM-EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++ + LG P + TY +LI G A + V +K P+ AT L+
Sbjct: 770 TLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDA 829
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + FEL +E T + NT+
Sbjct: 830 YGKSGKIDELFELY-----KEMSTHECEANTI---------------------------- 856
Query: 185 SSTFDYTVTCLVTGLDLNETCGIL-DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T + ++ LV ++++ + D R P TY L++ L K+GR E +
Sbjct: 857 --THNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 914
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ N YN++I+ F K D A + + M + P+L T++ L+ C
Sbjct: 915 EGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 974
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM-VEWGVPPNTIT 362
V + L E G PD +N +I+ L ++HR E+AL +EM G+ P+ T
Sbjct: 975 GRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYT 1034
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN LI +L G V + +++ ++Q + P+++TFNALI+ + K E A + +M+
Sbjct: 1035 YNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1094
Query: 423 TLGLRPDNFSYSAL 436
T G P+ +Y L
Sbjct: 1095 TGGFSPNTGTYEQL 1108
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 219/481 (45%), Gaps = 38/481 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P + +I + ++L + Q+ + T+ L+ +C +A+
Sbjct: 140 VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAM 199
Query: 66 RLV-KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER--NVCPNEATVRSLV 122
+V ++M LG P+V++YT L+ G C K+ E ++ +M E N PN + +++
Sbjct: 200 NIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVI 259
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
HG F+ D KA+ L + ++ + CN+++ L +A A+L++M
Sbjct: 260 HGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQM------ 313
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
I + P +TY L+ +G+ E R
Sbjct: 314 -----------------------------IDEHIMPNCTTYNSLIHGYLSSGQWTEAVRI 344
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + +D NV +Y+M+IDC CK + A EI M PN T+ +L+ G+
Sbjct: 345 LKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYAT 404
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + ++++ G +P + FN I C+ R ++A ++M + G P+ +
Sbjct: 405 EGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVA 464
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y +I LC IG + ++ F +M D +SPDI TFN LI F K EKAE+ F+ M+
Sbjct: 465 YTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMM 524
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G+ P+ +++++I L K G+ EA++ F M + G P+ + N ++ G
Sbjct: 525 DRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVG 584
Query: 483 E 483
E
Sbjct: 585 E 585
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/482 (26%), Positives = 214/482 (44%), Gaps = 20/482 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMS--VDQCKPDRFTYNILIHGICRIGVV 61
LG +P Y ++ L + A M+ D C P+ +Y +IHG + G V
Sbjct: 209 LGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDV 268
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
+A L +M G PNV T +IDG C + + + VL+ M + ++ PN T SL
Sbjct: 269 GKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSL 328
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRG 180
+HG +A +L + M R+ +V ++L L + + +EA I M G
Sbjct: 329 IHGYLSSGQWTEAVRIL-KEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSG 387
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P +ST+ + T +L + + D ++ G++P + + + A K GR E
Sbjct: 388 QKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEAS 447
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
N + + + ++ +Y VID CK+ +D A +M D ++P+++TFNTLI G
Sbjct: 448 LTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGF 507
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ K EL +++ G P+ TFNSMID L + + +A M G PN
Sbjct: 508 ALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNV 567
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
++YN +I G+V ++L M + P TFN L+
Sbjct: 568 VSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLD----------------G 611
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+++GL+PD + LI + + GR ++ F M D+ T N+ L + +
Sbjct: 612 MVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRGVTVKAS 671
Query: 481 FE 482
+
Sbjct: 672 YH 673
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 180/398 (45%), Gaps = 17/398 (4%)
Query: 109 RNVCPNEATVRSLVHGVFRCLDP---HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSM 165
+ V P+ AT L+ C D + F L + ++ Q + LL L
Sbjct: 138 KKVAPDIATFGILISC---CCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKR 194
Query: 166 ASEAAAI-LRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK------P 218
S+A I LR+M + G P+ F YT L+ GL + C I + P
Sbjct: 195 TSDAMNIVLRRMPELGCTPD--VFSYTT--LLKGLCAEKKCEEAAELIHMMAEDGDNCPP 250
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
+Y ++ +K G + + + NV + N VID CKV MD+A +
Sbjct: 251 NVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVL 310
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
++M D I PN T+N+LI G+ + + +L + G +P+ T++ +IDCLC++
Sbjct: 311 QQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKS 370
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+A + + M++ G PN TY L+ G++ + M + + P + F
Sbjct: 371 GLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVF 430
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
N I ++C+ ++++A F M G PD +Y+ +I L K GR D+A F M
Sbjct: 431 NIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMID 490
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+G +PD T N ++ G++E+A ++ +RGI
Sbjct: 491 DGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGI 528
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 221/455 (48%), Gaps = 4/455 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ-CKPDRFTYNILIHGICRIGVVDEA 64
++P+ R YN V++ L K+ AY ++M + PD TY+ +I+G C+ G +D A
Sbjct: 37 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 96
Query: 65 LRLVKQMEGL-GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
++++M G AP+V TYT ++DG C ++ ++ MK + V P++ T +L+
Sbjct: 97 CEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 156
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYL 182
G +A +L + +V T L+ + +A +L M R +
Sbjct: 157 GWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCV 216
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T+ + L DL++ + +G P TY L+ L A +
Sbjct: 217 PNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLL 276
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
++ + + SYN ++D +C++ ++ A ++ +EM + P+ +T+ L+ G C
Sbjct: 277 MDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCN 336
Query: 303 DAEVHKTRELLV-MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ + + R LL M G PD T++ ++ RA RF +A + + EM+ V PN +
Sbjct: 337 ASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAV 396
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY+ LI LC G V ++ + + M R+ P + TFN++I + CR+ +++A K +M
Sbjct: 397 TYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAM 456
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
GL P +Y+ L++ ++GR + A + F M
Sbjct: 457 AAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVM 491
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 227/469 (48%), Gaps = 9/469 (1%)
Query: 40 QCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV 99
+C+P T+ I+I G C+ + +AL ++M APN TY ++++G C A+ ++
Sbjct: 2 ECQPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKA 60
Query: 100 FRVLEIMKE-RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LL 157
+ VL+ M++ ++V P+ T ++++G + + +A E+L + R+ + +V T ++
Sbjct: 61 YEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVV 120
Query: 158 YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL-DTFIKRGV 216
L + A ++R+M +G P+ TF +T ++E + +
Sbjct: 121 DGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSW 180
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
KP TY L++ K+G + + L + + V NV +Y+ ++ CK +D+A +
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 240
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
+ R M + PN+VT+ TLI G C +V R L+ + PD ++N+++D C
Sbjct: 241 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYC 300
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ-ADRISPDI 395
R R E+A EM P+ ITY L+R C + + L + M+ A I PD+
Sbjct: 301 RLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 360
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
T++ ++ + R + +A + M+ + P+ +YS+LI L K+GR D A + +
Sbjct: 361 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKN 420
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFPGL 504
M P T N ++ L + G +EA ++ G+ PG+
Sbjct: 421 MVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLE----PGM 465
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 223/467 (47%), Gaps = 13/467 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P Y +V+D L + +D A ++M + +PD+FT++ LI G C VDEA
Sbjct: 108 GIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEA 167
Query: 65 LRLVKQ-MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L+L K+ + + P+V TYT LIDGFC + + + ++L +M+ R PN T SL+H
Sbjct: 168 LKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLH 227
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + D +A +L R + + + TL++ L A ++ +M P
Sbjct: 228 GLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPP 287
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ +++ + + E + + P TY L+ A R +E R+L
Sbjct: 288 DTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASR-LEEARFL 346
Query: 244 --NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
N + +V +Y++V+ + + A E +EM R++APN VT+++LI G C
Sbjct: 347 LENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLC 406
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K V E+L ++ +P TFNS+I LCR ++A L M G+ P +
Sbjct: 407 KAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMV 466
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQ--------ADRISPDIYTFNALIQSFCRMNKIEK 413
TY L+ G + + LF+ M+ A + P+ F+ALI+ C+ +I+K
Sbjct: 467 TYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPE-QAFSALIRGLCKAREIDK 525
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
A + + P A++ L+++GR +EA + S+ + G
Sbjct: 526 AMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 572
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/487 (24%), Positives = 229/487 (47%), Gaps = 11/487 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ + +ID K+N + A F++M + P+ TYN++++G+C+ + +A +
Sbjct: 5 PTVVTWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKAYEV 63
Query: 68 VKQM-EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER----NVCPNEATVRSLV 122
+K+M +G AP++ TY+ +I+GFC + E+ R EI++E + P+ T S+V
Sbjct: 64 LKEMRDGKSVAPDLVTYSTVINGFC---KQGEMDRACEILREMVTRDGIAPDVVTYTSVV 120
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK-MGDRGY 181
G+ R +A E++ + K + L+ N EA + ++ + +
Sbjct: 121 DGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSW 180
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P+ T+ + +L + +L R P TY L+ L KAG +
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 240
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ V NV +Y +I C + +D A + EM P+ V++N L+ G+C
Sbjct: 241 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYC 300
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM-VEWGVPPNT 360
+ + + ++L + PD+ T+ ++ C A R E+A L M G+ P+
Sbjct: 301 RLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 360
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TY+I++ + Q+M A ++P+ T+++LI C+ +++ A + +
Sbjct: 361 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKN 420
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ + P +++++I AL + G DEA + ++M +G P T +LE + GR
Sbjct: 421 MVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR 480
Query: 481 FEEAHDI 487
E A+++
Sbjct: 481 MEIAYEL 487
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 241/494 (48%), Gaps = 7/494 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS YN ++ L + ++ A + M +D P+ +YNILI +C+ G ++ A
Sbjct: 372 GCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAA-PNLTSYNILIDMLCKAGELEAA 430
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ M+ G PN+ T I+ID C A+R+ E + + + P+ T SL+ G
Sbjct: 431 LKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDG 490
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R + A+ L + ++ +V +L+ + I ++M RG P+
Sbjct: 491 LGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPD 550
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + C+ ++ + + + +G+ P +Y +L+ L K G + +
Sbjct: 551 LMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFY 610
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L + +YN+VID FCK +++A ++ EM+ + + P +VT+ ++I G A
Sbjct: 611 EMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGL---A 667
Query: 305 EVHKTRELLVMLLECGFKP---DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
++ + E ++ E K + ++S+ID + R ++A L E+++ G+ PNT
Sbjct: 668 KIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTY 727
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
T+N L+ +L ++ +L FQ M+ + P+ T++ ++ C++ K KA + M
Sbjct: 728 TWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEM 787
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
GL+P+ +Y+ +I L + G EAK F + +G PDS N ++E L +
Sbjct: 788 QKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKA 847
Query: 482 EEAHDIVKTSKERG 495
+A+ + + ++ +G
Sbjct: 848 MDAYILFEETRLKG 861
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 219/488 (44%), Gaps = 1/488 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN +I + AY ++ C P YN ++ + R G V+EALR+
Sbjct: 340 PCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRI 399
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ M+ + APN+ +Y ILID C A + +V + MKE + PN TV ++ + +
Sbjct: 400 LEAMK-MDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCK 458
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+A + + + + +L+ L + ++A + KM D G P +
Sbjct: 459 AQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVV 518
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + + I + RG P M+ ++KAG +G +
Sbjct: 519 YTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIK 578
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
L +V SY+++I K ++ EM+++ + + +N +I G CK +V+
Sbjct: 579 AQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVN 638
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
K +LL + G +P T+ S+ID L + R ++A E V N + Y+ LI
Sbjct: 639 KAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLI 698
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+G + + + +++ ++P+ YT+N L+ + + +I++A F +M L
Sbjct: 699 DGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCP 758
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P+ +YS ++ L K +F++A + M++ G P++ T ++ L + G EA D+
Sbjct: 759 PNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDL 818
Query: 488 VKTSKERG 495
+ K G
Sbjct: 819 FERFKSSG 826
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/492 (22%), Positives = 227/492 (46%), Gaps = 1/492 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P + ++I L K+ +D A F+++ ++ P + YN +I G +G +EA
Sbjct: 302 GLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEA 361
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+++ + G P+V Y ++ +V E R+LE MK + PN + L+
Sbjct: 362 YSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMK-MDAAPNLTSYNILIDM 420
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + A ++ E + N ++ RL EA +I + + P+
Sbjct: 421 LCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPD 480
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S TF + L +N+ + + + G P Y L+ +K GR +G +
Sbjct: 481 SVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYK 540
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ N +DC K +++ + E++ + + P++ +++ LI G K
Sbjct: 541 EMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGG 600
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
T +L + E G D +N +ID C++ + A L EM G+ P +TY
Sbjct: 601 FSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYG 660
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I L I + + LF++ ++ + ++ +++LI F ++ +I++A ++
Sbjct: 661 SVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQK 720
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL P+ ++++ L+ AL+K+ DEA F +M+ C P+ T ++++ L + +F +A
Sbjct: 721 GLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKA 780
Query: 485 HDIVKTSKERGI 496
+ +++G+
Sbjct: 781 FVFWQEMQKQGL 792
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 123/502 (24%), Positives = 221/502 (44%), Gaps = 11/502 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G PS ++ + VKS + A+ + M + +P Y LI +
Sbjct: 158 MSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHE 217
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
D L L++QM+ +GY V+ +T LI F RV +L+ MK + N V
Sbjct: 218 ADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSF--NADLV-- 273
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-----LSNNSMASEAAAILRK 175
L + C ++ +F E +Q LV + + + L EA + +
Sbjct: 274 LYNVCIDCFGKVGKVDMAWKFF-HELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEE 332
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
+ +P ++ + + NE +L+ ++G P Y ++ L + G+
Sbjct: 333 LDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGK 392
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
E R L + D N+ SYN++ID CK ++ A ++ M++ + PN++T N
Sbjct: 393 VEEALRILEAMKMDA-APNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNI 451
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
+I CK + + + + L PD TF S+ID L R + DA +M++ G
Sbjct: 452 MIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSG 511
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
PN + Y LIR+ G +++++M SPD+ N + + +IEK
Sbjct: 512 QTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGR 571
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
F + GL PD SYS LI L+K G + + F M++ G + D+ N++++
Sbjct: 572 ALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGF 631
Query: 476 VQQGRFEEAHDIVKTSKERGIS 497
+ G+ +A+ +++ K +G+
Sbjct: 632 CKSGKVNKAYQLLEEMKTKGLQ 653
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/529 (22%), Positives = 228/529 (43%), Gaps = 36/529 (6%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y +I AL ++ D +QM + + LI R G VD AL L
Sbjct: 200 PAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSL 259
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M+ + ++ Y + ID F +V ++ +K + + P++ T S++ + +
Sbjct: 260 LDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCK 319
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+A EL + + NT++ + +EA ++L + +G +P
Sbjct: 320 AERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIA 379
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ +TCL + E IL+ +K P ++Y +L++ L KAG + + +
Sbjct: 380 YNCILTCLGRKGKVEEALRILEA-MKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMK 438
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ L N+ + N++ID CK +D A I + + P+ VTF +LI G + +V+
Sbjct: 439 EAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVN 498
Query: 308 KTRELLVMLLECGFKPDKFTFNSMI----------------------------------- 332
L +L+ G P+ + S+I
Sbjct: 499 DAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYM 558
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
DC+ +A E E+ G+ P+ +Y+ILI L G + +LF +M+ +
Sbjct: 559 DCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLH 618
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
D +N +I FC+ K+ KA + M T GL+P +Y ++I L K R DEA
Sbjct: 619 LDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYML 678
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
F + + + + +++ + GR +EA+ I++ ++G++ ++
Sbjct: 679 FEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTY 727
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 157/386 (40%), Gaps = 42/386 (10%)
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREP--LTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
LV GV R L + R++ER+ L N LL ++ IL +M
Sbjct: 101 LVVGVIRRLKDVRVALHYFRWVERKTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSM 160
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G+ P ++T V V L E G+++T K +P +S Y L+ AL A E
Sbjct: 161 AGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAH---E 217
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
D L + R+M++ + F TLI
Sbjct: 218 ADPMLT--------------------------------LLRQMQEIGYEVTVHLFTTLIC 245
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
++ V LL + F D +N IDC + + + A E+ G+ P
Sbjct: 246 VFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVP 305
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ +T+ +I LC V ++ LF+++ +++ P +Y +N +I + + K +A
Sbjct: 306 DDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLL 365
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
G P +Y+ ++ L + G+ +EA + +M+ + P+ + N++++ L +
Sbjct: 366 ERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAA-PNLTSYNILIDMLCKA 424
Query: 479 GRFEEAHDIVKTSKERGISFKSFPGL 504
G E A + + KE G+ FP +
Sbjct: 425 GELEAALKVQDSMKEAGL----FPNI 446
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 223/472 (47%), Gaps = 10/472 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCK-------PDRFTYNILIHGICR 57
GI+ + + ++ AL +D A F + + C+ PD TY ++ G+ +
Sbjct: 59 GITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFK 118
Query: 58 IGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
G D L ++M P + TYT+L+DG C A +V V E M + P+
Sbjct: 119 AGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIA 178
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
SL+ G+ + +A +L+ + R P + +++ L EA +++M
Sbjct: 179 YSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMR 238
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
R P T+ + VT + + E +++ R P +Y + +EALY GR
Sbjct: 239 RRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRRE 298
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E ++ + + ++++Y ++ID FCK M AT + R M + PN + ++
Sbjct: 299 EAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIM 358
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV--EWG 355
G K + + + EL +L+ G P T+N++I+ LC+ + ++AL+ L EM +
Sbjct: 359 DGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEE 418
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ P+ +TY+++I L +G R+ L +M + + PD +T+ +LIQ+ K+ +A
Sbjct: 419 LEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAM 478
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ ML G+ PD+ +Y L++ L +S D A M +NG P+ +T
Sbjct: 479 ELLEEMLKAGIFPDDHTYGTLVQILCRSD-VDAAWDLLQEMMRNGHTPNEFT 529
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/496 (22%), Positives = 217/496 (43%), Gaps = 20/496 (4%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N+++ ALV+ + A L F Q S+ + P+ ++NIL+ G + L+++M+
Sbjct: 1 NSLLLALVRGGQLSDA-LGFFQSSISE--PNVSSFNILLRGFAARDDFEVVNALLREMKA 57
Query: 74 LGYAPNVYTYTILIDGFCNAK-----------RVAEVFRVLEIMKERNVCPNEATVRSLV 122
G N T+ +++ C + R E R+ E ++ P+ T ++V
Sbjct: 58 RGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIE----APDSVTYTAIV 113
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+F+ + E + + + L L+ L A + +M +G+
Sbjct: 114 DGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHK 173
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ + + L ++E ++D I RG P Y ++ L K GR E +
Sbjct: 174 PDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKT 233
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + + RL V++Y+ ++ + + ++ A + EM DRD AP+ +++ I
Sbjct: 234 IQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYS 293
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ ++ ++E G KPD T+ +ID C+ A L M + V PN
Sbjct: 294 IGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYI 353
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y +++ + +L L+Q++ D I P T+N +I + C++ K+++A + M
Sbjct: 354 YTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQ 413
Query: 423 TLG--LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
L P +YS +I L K G + A M NG PD +T +++TL G+
Sbjct: 414 RRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGK 473
Query: 481 FEEAHDIVKTSKERGI 496
A ++++ + GI
Sbjct: 474 VSRAMELLEEMLKAGI 489
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 184/430 (42%), Gaps = 73/430 (16%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P + Y A++D L K+ + D +++M +C+P TY +L+ G+C+ V+ A
Sbjct: 103 APDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACD 162
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+ ++M G+ P++ Y+ LIDG A RV E +++++M R P S+V G+
Sbjct: 163 VFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLC 222
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+C +A + + R + + ++ EA A++ +M DR P++
Sbjct: 223 KCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTI 282
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY----------------------- 223
++ + L + E + +T +++G KP TY
Sbjct: 283 SYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLM 342
Query: 224 ------------LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
++M+ K+ R E + KD ++ + +YN VI+ CK+ M
Sbjct: 343 DKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKM 402
Query: 272 DRATEICREMRDR--DIAPNLVTFNTLISGHCK--------------------------- 302
D A E+ REM+ R ++ P++VT++ +I G K
Sbjct: 403 DEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYT 462
Query: 303 --------DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
+V + ELL +L+ G PD T+ +++ LCR+ + A D L EM+
Sbjct: 463 SLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSD-VDAAWDLLQEMMRN 521
Query: 355 GVPPNTITYN 364
G PN T+
Sbjct: 522 GHTPNEFTFK 531
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++I L + + A ++M PD TY L+ +CR VD A
Sbjct: 453 GVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAA 511
Query: 65 LRLVKQMEGLGYAPNVYTY 83
L+++M G+ PN +T+
Sbjct: 512 WDLLQEMMRNGHTPNEFTF 530
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 234/504 (46%), Gaps = 19/504 (3%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV---- 68
+N +I + + + F +++ +PD T+N L+HG+C + EAL L
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 69 -----------KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
QM +G P V T+ LI+G C RV E ++ M + + + T
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
++V+G+ + D A LL + E ++ + ++ RL + S+A + +M
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
++G P T++ + + ++ +L I+R + P T+ L+ A K G+
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E ++ + + + + +YN +I FCK N D A + M D +P++VTFNT+I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTII 439
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
+C+ V + +LL + G + T+N++I C A D EM+ GV
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P+TIT NIL+ C + +L LF+ +Q +I D +N +I C+ +K+++A
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F S+ G+ PD +Y+ +I +A F M+ NG PD+ T N ++ ++
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 619
Query: 478 QGRFEEAHDIVKTSKERGISFKSF 501
G +++ +++ + G S +F
Sbjct: 620 AGEIDKSIELISEMRSNGFSGDAF 643
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 226/498 (45%), Gaps = 24/498 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSI-----------DLAYLK----FQQMSVDQCKPDRFTY 48
LG P +N ++ L + I + +L+ F QM P T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 49 NILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
N LI+G+C G V EA LV +M G G +V TY +++G C +L M+E
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHK--AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
++ P+ +++ + C D H A L +E+ N ++ +
Sbjct: 290 THIKPDVVIYSAIIDRL--CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
S+A +LR M +R P+ TF+ ++ V L E + D + R + P TY +
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ K R + H+F +V ++N +ID +C+ +D ++ RE+ R +
Sbjct: 408 IYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
N T+NTLI G C+ ++ ++L ++ G PD T N ++ C + E+AL+
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
+ + +T+ YNI+I +C V + LF + + PD+ T+N +I FC
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ I A F M G PDN +Y+ LI+ +K+G D++ + M NG + D++
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Query: 467 TSNLILETLVQQGRFEEA 484
T ++ + L+ GR +++
Sbjct: 644 TIKMVAD-LITDGRLDKS 660
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/513 (25%), Positives = 225/513 (43%), Gaps = 51/513 (9%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N VI V+ N D+A +++M + + + +++NILI C + +L ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
LG+ P+V T+ L+ G C R++E + M E A +V L P
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVE---IGLTP-- 224
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
++I F NTL+ L EAAA++ KM +G + T+ V
Sbjct: 225 ---VVITF------------NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
+ D +L + +KP Y +++ L K G + + + + +
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV +YN +ID FC A + R+M +R+I P+++TFN LIS K+ ++ + +L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 314 -VMLLECGF------------------------------KPDKFTFNSMIDCLCRAHRFE 342
ML C F PD TFN++ID CRA R +
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+ + L E+ G+ NT TYN LI C + ++ + LFQ+M + + PD T N L+
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
FC K+E+A + F + + D +Y+ +I + K + DEA F S+ +G
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
PD T N+++ + +A+ + K+ G
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 173/386 (44%), Gaps = 21/386 (5%)
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
F+ LD A + + P + CN ++ + A ++ RKM R
Sbjct: 84 FKSLD--DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNI 141
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM----------EALYKAGR 235
+F+ + C L+ + K G +P T+ L+ EAL G
Sbjct: 142 YSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201
Query: 236 DVEGD-----RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
VE + + + L V ++N +I+ C + A + +M + + ++
Sbjct: 202 MVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
VT+ T+++G CK + LL + E KPD ++++ID LC+ DA SE
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M+E G+ PN TYN +I C+ G + + RL + M I+PD+ TFNALI + + K
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+ +AEK ML + PD +Y+++I K RFD+AK F M +PD T N
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNT 437
Query: 471 ILETLVQQGRFEEAHDIVKTSKERGI 496
I++ + R +E +++ RG+
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGL 463
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 124/271 (45%), Gaps = 15/271 (5%)
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ +++ + R N VI F ++N D A + R+M R I N+ +FN LI C
Sbjct: 93 FFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFC 152
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS------------ 349
++ + L + GF+PD TFN+++ LC R +AL
Sbjct: 153 DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVA 212
Query: 350 ---EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
+MVE G+ P IT+N LI LC G V + L KM + D+ T+ ++ C
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+M + A M ++PD YSA+I L K G +A+ F M + G P+ +
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T N +++ GR+ +A +++ ER I+
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 35/173 (20%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNIL--------- 51
IS G+ +T YN +I + ++++ A FQ+M PD T NIL
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 52 --------------------------IHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTI 85
IHG+C+ VDEA L + G P+V TY +
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELL 138
+I GFC +++ + MK+ P+ +T +L+ G + + K+ EL+
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 227/493 (46%), Gaps = 35/493 (7%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F G +P Y+ VI+ + Q+M + KP+ +TYN +I +C+ G
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD+A R++++M G P+ YT LIDGFC + +++ + M+++ + P+ +
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ RC EA + KM RG
Sbjct: 121 VICGLCRC-----------------------------------GKMMEADKVFNKMFSRG 145
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T+ + ++ + + + ++ G+ P TY L + L K G+ +
Sbjct: 146 VEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTAN 205
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L+ + L N+ +YN +++ CK + +A ++ EM + P+ +TF TL+ +
Sbjct: 206 ELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAY 265
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK E+ K ELL +L+ G +P TFN +++ C + ED L+ M+E G+ PNT
Sbjct: 266 CKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNT 325
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
TYN L++ C ++ + +++ M A + PD T+N LI+ C+ +++A
Sbjct: 326 TTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKE 385
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G SY+++IK K + EA++ F M + G D+ NL ++ +G
Sbjct: 386 MAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGN 445
Query: 481 FEEAHDIVKTSKE 493
E A ++ + E
Sbjct: 446 METALELCDEAIE 458
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 215/455 (47%), Gaps = 35/455 (7%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
PD +Y+ +I+G C G + + L+L+++M+ G PN+YTY +I C + +V + RV
Sbjct: 8 PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
L M + + P+ +L+ G + + A++L F E E Q++V + + Y
Sbjct: 68 LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKL---FDEMEK--QRIVPDFIAY---- 118
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
A++ + G + E+ + + RGV+P T
Sbjct: 119 -------TAVICGLCRCGKMMEADK-------------------VFNKMFSRGVEPDEVT 152
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y L++ K+G + N + + L NV +Y + D CK+ +D A E+ EM
Sbjct: 153 YTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMC 212
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+ + N+ T+N+L++G CK + + +L+ + G PD TF +++D C+
Sbjct: 213 GKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMV 272
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
A + L EM++ G+ P IT+N+L+ C G + RL M I P+ T+N+L+
Sbjct: 273 KAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLM 332
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+ +C N + + + M G+ PD+ +Y+ LIK K+ EA M + G N
Sbjct: 333 KQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFN 392
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ + N I++ ++ + EA ++ + + G++
Sbjct: 393 LTASSYNSIIKGFFKKKKISEARELFEEMRREGMA 427
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 153/318 (48%)
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
RG P+ ++ + G +L + ++ +G+KP TY ++ L K+G+ +
Sbjct: 4 RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+R L + +V + Y +ID FCK+ + A ++ EM + I P+ + + +I
Sbjct: 64 AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G C+ ++ + ++ + G +PD+ T+ ++ID C++ E A ++MV+ G+ P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N +TY L LC +G V + L +M + +I T+N+L+ C+ I +A K
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M G+ PD +++ L+ A K+G +A + M G P T N+++
Sbjct: 244 EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMS 303
Query: 479 GRFEEAHDIVKTSKERGI 496
G E+ ++ E+GI
Sbjct: 304 GMLEDGERLLAWMLEKGI 321
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 234/485 (48%), Gaps = 5/485 (1%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
RL + ++D + K ++I L FQ+M + P ++ I R + L KQ
Sbjct: 49 RLRSGIVD-IKKDDAIAL----FQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQ 103
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
+E G A N+YT I+I+ FC + + VL + + P+ T +L+ G+F
Sbjct: 104 LELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGK 163
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A L+ R +E + N+++ + + S A +LRKM +R + T+
Sbjct: 164 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 223
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L ++ + +G+K TY L+ L KAG+ +G L +
Sbjct: 224 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 283
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+V NV ++N+++D F K + A E+ +EM R I+PN++T+NTL+ G+C + +
Sbjct: 284 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 343
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+L +++ PD TF S+I C R +D + + + G+ N +TY+IL++
Sbjct: 344 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 403
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C G + + LFQ+M + + PD+ T+ L+ C K+EKA + F + +
Sbjct: 404 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 463
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
Y+ +I+ + K G+ ++A F S+ G P+ T +++ L ++G EA+ +++
Sbjct: 464 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 523
Query: 491 SKERG 495
+E G
Sbjct: 524 MEEDG 528
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 231/490 (47%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ A+ ++ +L +Q+ ++ + +T NI+I+ CR A +
Sbjct: 76 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 135
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ LGY P+ T+ LI G +V+E +++ M E P+ T S+V+G+ R
Sbjct: 136 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 195
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D A +LL + ER +T++ L + A ++ ++M +G T
Sbjct: 196 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 255
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ V L N+ +L + R + P T+ +L++ K G+ E + +
Sbjct: 256 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 315
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ N+ +YN ++D +C N + A + M +P++VTF +LI G+C V
Sbjct: 316 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 375
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
++ + + G + T++ ++ C++ + + A + EMV GV P+ +TY IL+
Sbjct: 376 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 435
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G + ++L +F+ +Q ++ I + +I+ C+ K+E A F S+ G++
Sbjct: 436 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 495
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P+ +Y+ +I L K G EA ME++G P+ T N ++ ++ G + +
Sbjct: 496 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 555
Query: 488 VKTSKERGIS 497
++ K G S
Sbjct: 556 IEEMKSCGFS 565
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 207/440 (47%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P T +N +I L + A + +M + C+PD TYN +++GICR G
Sbjct: 142 LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 201
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L+++ME +V+TY+ +ID C + + + M+ + + + T SLV
Sbjct: 202 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 261
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + + LL + RE + + N LL EA + ++M RG P
Sbjct: 262 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 321
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + L+E +LD ++ P T+ L++ R +G +
Sbjct: 322 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 381
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
++ K LV+N +Y++++ FC+ + A E+ +EM + P+++T+ L+ G C +
Sbjct: 382 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 441
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ K E+ L + + ++I+ +C+ + EDA + + GV PN +TY
Sbjct: 442 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 501
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
++I LC G ++ + L +KM+ D +P+ T+N LI++ R + + K M +
Sbjct: 502 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 561
Query: 424 LGLRPDNFSYSALIKALIKS 443
G D S +I L+ +
Sbjct: 562 CGFSADASSIKMVIDMLLSA 581
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 228/494 (46%), Gaps = 7/494 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ + N +I+ + AY ++ +PD T+N LI G+ G V EA
Sbjct: 108 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 167
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ LV +M G P+V TY +++G C + + +L M+ERNV + T +++
Sbjct: 168 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 227
Query: 125 VFR--CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ R C+D + L + ME + + +V N+L+ L ++ A +L+ M R
Sbjct: 228 LCRDGCIDAAIS---LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 284
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P TF+ + V L E + I RG+ P TY LM+ R E +
Sbjct: 285 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 344
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L+ + +++ ++ ++ +I +C V +D ++ R + R + N VT++ L+ G C
Sbjct: 345 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 404
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ ++ EL ++ G PD T+ ++D LC + E AL+ ++ + + +
Sbjct: 405 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 464
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y +I +C G V + LF + + P++ T+ +I C+ + +A M
Sbjct: 465 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 524
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ-GR 480
G P++ +Y+ LI+A ++ G + + M+ G + D+ + ++++ L+ R
Sbjct: 525 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKR 584
Query: 481 FEEAHDIVKTSKER 494
+ + K SK R
Sbjct: 585 LTLRYCLSKGSKSR 598
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 126/527 (23%), Positives = 225/527 (42%), Gaps = 42/527 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI S YN+++ L K+ + L + M + P+ T+N+L+ + G + EA
Sbjct: 248 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 307
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L K+M G +PN+ TY L+DG+C R++E +L++M P+ T SL+ G
Sbjct: 308 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 367
Query: 125 ---VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRG 180
V R D K F R + + L V ++L + + A + ++M G
Sbjct: 368 YCMVKRVDDGMKVF----RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 423
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
LP+ T+ + L L + I + K + Y ++E + K G+ +
Sbjct: 424 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 483
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + NV +Y ++I CK + A + R+M + APN T+NTLI H
Sbjct: 484 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 543
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS-------EMVE 353
+D ++ + +L+ + CGF D + +ID L A + CLS +++E
Sbjct: 544 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLE 603
Query: 354 WG---------------VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
P NTIT ++ + ++ A G S L + ++ R S + F
Sbjct: 604 LSGSEKIRLSSLTFVKMFPCNTITTSLNVNTIEARG--MNSAELNRDLRKLRRSSVLKKF 661
Query: 399 N-----ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR---FDEAK 450
L+ + +E AE M+ L L D Y+ + + GR A+
Sbjct: 662 KNRDVRVLVTNELLTWGLEDAECDL--MVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAE 719
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ M Q G P++ T + +++ ++ R +EA+ ++ +G S
Sbjct: 720 ELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDS 766
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 155/383 (40%), Gaps = 33/383 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS G+ + Y+ ++ +S I LA FQ+M PD TY IL+ G+C G
Sbjct: 384 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 443
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++AL + + ++ + YT +I+G C +V + + + + + V PN T
Sbjct: 444 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 503
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ + +A LL + E NTL+ + + +A ++ +M G
Sbjct: 504 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 563
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ ++S+ + L++ + L + +G K R + L +G E
Sbjct: 564 FSADASSIKMVIDMLLSAMKRL----TLRYCLSKGSKSR-------QDLLELSGS--EKI 610
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
R + F N + ++ ++ M + E+ R++R + L F
Sbjct: 611 RLSSLTFVKMFPCNTITTSLNVNTIEARGM--NSAELNRDLRKLRRSSVLKKFKN----- 663
Query: 301 CKDAEVHKTRELLVMLL---ECGFKPDKFTFNSMIDCLCRAHRFE---------DALDCL 348
+D V T ELL L EC D + RA R A +
Sbjct: 664 -RDVRVLVTNELLTWGLEDAECDLMVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAEELH 722
Query: 349 SEMVEWGVPPNTITYNILIRSLC 371
EM++ G+ PNTITY+ LI C
Sbjct: 723 KEMIQRGIAPNTITYSSLIDGFC 745
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+DA+ EM+ P+ + ++ ++ L ++++ + I+ +IYT N +
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I FCR K A ++ LG PD +++ LIK L G+ EA M +NGC
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
PD T N I+ + + G A D+++ +ER + F
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF 219
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L K+M G APN TY+ LIDGFC R+ E ++L++M V ++ +R L+
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLM----VTKGDSDIRYLLA 773
Query: 124 GVFR 127
G+ R
Sbjct: 774 GLMR 777
>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 825
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 130/507 (25%), Positives = 233/507 (45%), Gaps = 39/507 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKP---DRFTYNILIHGICRIGVVDE 63
P+ N +++ LVKS +D+A + +M D D +T +I++ G+C +G ++E
Sbjct: 164 PTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEE 223
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
RL+K G P+V Y ++IDG+C + R L +K + V P T +L++
Sbjct: 224 GRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALIN 283
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + + +LL R V N ++ + +EAA +LR+M + G P
Sbjct: 284 GFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGP 343
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ +T++ + G + E +L+ +RG+ P +Y LM A K G V+ L
Sbjct: 344 DITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGML 403
Query: 244 NHVF----KDRLVS-------------------------------NVNSYNMVIDCFCKV 268
+ K LVS + YN+++ CK
Sbjct: 404 FRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKK 463
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+ + EM DR++ P++ F TLI G ++ E+ + ++ +++ G P +
Sbjct: 464 GRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGY 523
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N+MI C+ + DAL CL+EM P+ TY+ +I D++ +L++F +M
Sbjct: 524 NAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMK 583
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ P++ T+ +LI FC+ + +AEK F M + L P+ +Y+ L+ K+G+ +
Sbjct: 584 HKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPER 643
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETL 475
A F M NGC P+ T + ++ L
Sbjct: 644 ATSIFELMLMNGCLPNDATFHYLINGL 670
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 195/440 (44%), Gaps = 35/440 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y A+I+ K+ + +M+ + +N +I + G+V EA
Sbjct: 270 GVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEA 329
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++++M +G P++ TY I+I+ C R+ E +LE KER + PN+ + L+H
Sbjct: 330 AEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHA 389
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D KA +L R E +G++ L
Sbjct: 390 YCKKGDYVKASGMLFRIAE--------------------------------IGEKSDLVS 417
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F + V V +++ + + +++GV P Y +LM L K GR L+
Sbjct: 418 YGAFIHGV---VVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLS 474
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +V + +ID F + +D A +I + + + + P +V +N +I G CK
Sbjct: 475 EMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFG 534
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ L + PD++T++++ID + H AL +M++ PN ITY
Sbjct: 535 KMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYT 594
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C D+ R+ ++F M++ + P++ T+ L+ F + K E+A F ML
Sbjct: 595 SLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMN 654
Query: 425 GLRPDNFSYSALIKALIKSG 444
G P++ ++ LI L +
Sbjct: 655 GCLPNDATFHYLINGLTNTA 674
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 126/259 (48%)
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
T ++++ L G+ EG R + H + V +V YNM+ID +CK + AT E+
Sbjct: 207 TTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNEL 266
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+ + + P + T+ LI+G CK E +LL + G + FN++ID +
Sbjct: 267 KMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLV 326
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+A + L M E G P+ TYNI+I C G + + L +K + + P+ +++ L
Sbjct: 327 TEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPL 386
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
+ ++C+ KA F + +G + D SY A I ++ +G D A M + G
Sbjct: 387 MHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGV 446
Query: 462 NPDSYTSNLILETLVQQGR 480
PD+ N+++ L ++GR
Sbjct: 447 FPDAQIYNILMSGLCKKGR 465
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 169/412 (41%), Gaps = 9/412 (2%)
Query: 98 EVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTL 156
E+ VLE MK +++ P +L+ +A +L E V N L
Sbjct: 113 EIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLL 172
Query: 157 LYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL----DLNETCGILDTFI 212
L L + A + KM + +YT + +V GL + E ++
Sbjct: 173 LNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRW 232
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+ P Y ++++ K G R LN + ++ V +Y +I+ FCK +
Sbjct: 233 GKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFE 292
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
++ EM R + N+ FN +I K V + E+L + E G PD T+N MI
Sbjct: 293 AVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMI 352
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
+ C+ R E+A + L + E G+ PN +Y L+ + C GD ++ + ++
Sbjct: 353 NFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEK 412
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
D+ ++ A I +I+ A M+ G+ PD Y+ L+ L K GR K
Sbjct: 413 SDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLL 472
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFPGL 504
M PD Y +++ ++ G +EA I K +G+ PG+
Sbjct: 473 LSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVD----PGI 520
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 154/396 (38%), Gaps = 53/396 (13%)
Query: 5 GISPSTRLYNAVIDALVK-SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G+ P+ Y ++ A K + + + + F+ + + K D +Y IHG+ G +D
Sbjct: 375 GLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGE-KSDLVSYGAFIHGVVVAGEIDV 433
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL + ++M G P+ Y IL+ G C R+ + +L M +RNV P+ +L+
Sbjct: 434 ALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLID 493
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G R + +A ++ + + R+ + +V N ++ ++A + L +M +
Sbjct: 494 GFIRNGELDEAIKIF-KVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHA 552
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ T+ + V D++ + +K KP TY L+ K + ++
Sbjct: 553 PDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKV 612
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF--------- 293
+ + LV NV +Y ++ F K +RAT I M PN TF
Sbjct: 613 FSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTN 672
Query: 294 ----------------------------------------NTLISGHCKDAEVHKTRELL 313
N++I CK V + LL
Sbjct: 673 TATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLL 732
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+L GF D F +++ LC + ++ + +S
Sbjct: 733 TKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIIS 768
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS--PD 394
+ H+++D L+ S E V + + + ++ R + D L+ F S D
Sbjct: 41 KTHQWQDPLE--SRFAESKVVVSDVAHFVIDR----VHDAELGLKFFDWASTRPFSCSLD 94
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
++L++ + E +M L+P ++SALI A +SG D A Q F
Sbjct: 95 GVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFH 154
Query: 455 SM-EQNGCNPDSYTSNLILETLVQQGRFEEA 484
++ E + C P SNL+L LV+ G+ + A
Sbjct: 155 TVREMHNCFPTFVASNLLLNGLVKSGKVDVA 185
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 137/486 (28%), Positives = 220/486 (45%), Gaps = 14/486 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQC-KPDRFTYNILIHGICRIGVVDE 63
G T N V+ L + + L L+F V+ + +Y ILI+G+C G V+E
Sbjct: 102 GYGLDTVALNTVLKGLCVNGGV-LKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNE 160
Query: 64 ALRLVKQM--------EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNE 115
A+ L++ + +G NV Y+I+ID C V E F M VCPNE
Sbjct: 161 AVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNE 220
Query: 116 ATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
T SL+ G+ + F L+ + R V L+ L N M EA + +
Sbjct: 221 FTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDE 280
Query: 176 MGDRGYLPESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
M +RGY P T + CL +D+ + D + G K TY + + K
Sbjct: 281 MVNRGYEPNIVTCTALMGGYCLKGNVDMARE--LFDAIGEWGFKRDVWTYNVFIHGYCKV 338
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
GR + R + + ++ +V N+ +YN +IDC CK + A EI + M + P++VT
Sbjct: 339 GRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTC 398
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
L+ G CK + + L L+E G PD +++ +I C + R +A++ L +M
Sbjct: 399 CILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHL 458
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
+ P+ +TY+ LI LC G ++ + RL +M PD T++ L+ + + +++
Sbjct: 459 KNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDE 518
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A F M+ GL PD Y+ +I KS R DEA F M PD T ++
Sbjct: 519 AVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFN 578
Query: 474 TLVQQG 479
+ + G
Sbjct: 579 AVFKSG 584
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 162/348 (46%), Gaps = 8/348 (2%)
Query: 156 LLYRLSNNSMASEAAAILRKMGDR------GYLPESSTFDYTVT--CLVTGLDLNETCGI 207
L+ L N +EA +LR + G+ + + Y++ CL ++E
Sbjct: 148 LINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEF 207
Query: 208 LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
+ + GV P TY L+ L G+ +EG ++ + + L +V + ++ID CK
Sbjct: 208 YNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCK 267
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
M+ A E+ EM +R PN+VT L+ G+C V REL + E GFK D +T
Sbjct: 268 NGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWT 327
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+N I C+ R DA+ EM GV PN +TYN LI LC G+V+ + + + M
Sbjct: 328 YNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMH 387
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
++PDI T L+ C+ ++++A F ++ GL PD +SY+ LI S R
Sbjct: 388 RSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMG 447
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
EA M P T + +++ L + GR A ++ +G
Sbjct: 448 EAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKG 495
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 153/340 (45%), Gaps = 8/340 (2%)
Query: 166 ASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLL 225
S + +I K+ RGY ++ + + L + + D + G +Y +
Sbjct: 88 VSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGI 147
Query: 226 LMEALYKAGRDVEGDRYLNHVFKDR--------LVSNVNSYNMVIDCFCKVNMMDRATEI 277
L+ L + GR E L + K++ + NV Y++VIDC C+ +D E
Sbjct: 148 LINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEF 207
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
EM + PN T+ +LI G C + + L+ ++ G + F +ID LC+
Sbjct: 208 YNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCK 267
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
+A + EMV G PN +T L+ C G+V + LF + D++T
Sbjct: 268 NGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWT 327
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+N I +C++ ++ A + F M G+ P+ +Y++LI L K+G A + +M
Sbjct: 328 YNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMH 387
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
++G PD T ++L+ L + R ++A + E G++
Sbjct: 388 RSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLT 427
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 113/240 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN++ID L K+ + A+ + M PD T IL+ G+C+ +D+A
Sbjct: 355 GVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQA 414
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L Q+ G P+V++YTILI G C ++R+ E +L M +N+ P+ T L+ G
Sbjct: 415 ILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDG 474
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R A+ LL + PL + + LL L EA + +M RG P+
Sbjct: 475 LCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPD 534
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + ++E + + + P TY +L A++K+G + +++N
Sbjct: 535 VMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVN 594
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T Y+ ++DAL K +D A F QM +PD Y I+I G C+ +DEA
Sbjct: 495 GPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEA 554
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCP 113
+ L ++M P++ TYTIL + + + ++ + ++++ N P
Sbjct: 555 INLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPP 603
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 34/79 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y +ID KS ID A F++M + PD TY IL + + + G
Sbjct: 530 GLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYE 589
Query: 65 LRLVKQMEGLGYAPNVYTY 83
+ V + + P V Y
Sbjct: 590 WKFVNVIRDINPPPRVLKY 608
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 213/449 (47%), Gaps = 35/449 (7%)
Query: 34 QQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNA 93
++M + KP+ +TYN +I +C+ G V EA R++++M G AP+ YT LIDGFC
Sbjct: 212 EEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 271
Query: 94 KRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC 153
V+ +R+ + M++R + P+ T +++ G+ + R ME + L ++VC
Sbjct: 272 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQT----------GRVMEADKLFHEMVC 321
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
L P+ T+ + + E + + ++
Sbjct: 322 KRLE-------------------------PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQ 356
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G+ P TY L + L K G + L+ + + L N+ +YN +++ CK +D+
Sbjct: 357 MGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQ 416
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A ++ ++M P+ VT+ TL+ +CK E+ + ELL +L+ +P TFN +++
Sbjct: 417 AVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMN 476
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
C + ED L M+E G+ PN TYN LI+ C ++ + +++ M A + P
Sbjct: 477 GFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVP 536
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
D T+N LI+ C+ +++A M+ G SY+ALIK K +F EA++ F
Sbjct: 537 DGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELF 596
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFE 482
M + G D N+ + +G+ E
Sbjct: 597 EQMRREGLVADREIYNIFADINYDEGKME 625
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 186/430 (43%), Gaps = 35/430 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN VI L K+ + A ++M + PD Y LI G C++G V A
Sbjct: 218 GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSA 277
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL +M+ +P+ TYT +I G C RV E ++ M + + P+E T +L+ G
Sbjct: 278 YRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDG 337
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ EA ++ +M G P
Sbjct: 338 YCK-----------------------------------EGKMKEAFSLHNQMLQMGLTPN 362
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ L +++ +L ++G++ TY L+ L KAG + + +
Sbjct: 363 IVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMK 422
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +Y ++D +CK M RA E+ R+M DR++ P +VTFN L++G C
Sbjct: 423 DMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSG 482
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +LL +LE G P+ T+NS+I C + + M GV P+ TYN
Sbjct: 483 MLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYN 542
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
ILI+ C ++ + L + M + + ++NALI+ F + K +A + F M
Sbjct: 543 ILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRRE 602
Query: 425 GLRPDNFSYS 434
GL D Y+
Sbjct: 603 GLVADREIYN 612
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 164/349 (46%), Gaps = 4/349 (1%)
Query: 136 ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCL 195
E+ I+ ++ P T N ++ L +EA +LR+M G P+ + +
Sbjct: 213 EMQIKGLKPNPYTY----NGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGF 268
Query: 196 VTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNV 255
+++ + D KR + P F TY ++ L + GR +E D+ + + RL +
Sbjct: 269 CKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDE 328
Query: 256 NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
+Y +ID +CK M A + +M + PN+VT+ L G CK EV ELL
Sbjct: 329 VTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHE 388
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
+ G + + +T+NS+++ LC+A + A+ + +M G P+ +TY L+ + C +
Sbjct: 389 MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE 448
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+ R+ L ++M + P + TFN L+ FC +E EK ML G+ P+ +Y++
Sbjct: 449 MVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNS 508
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
LIK + + M G PD T N++++ + +EA
Sbjct: 509 LIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEA 557
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 190/432 (43%), Gaps = 35/432 (8%)
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L+++M+ G PN YTY +I C +VAE RVL M + P+ +L+ G
Sbjct: 208 LKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDG 267
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+L N S A + +M R P+
Sbjct: 268 --------------------------------FCKLGN---VSSAYRLFDEMQKRKISPD 292
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L + E + + + ++P TY L++ K G+ E N
Sbjct: 293 FITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHN 352
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L N+ +Y + D CK +D A E+ EM + + N+ T+N+L++G CK
Sbjct: 353 QMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAG 412
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + +L+ + GF PD T+ +++D C++ A + L +M++ + P +T+N
Sbjct: 413 NIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFN 472
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+L+ C G + +L + M I P+ T+N+LI+ +C N + + + M
Sbjct: 473 VLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAK 532
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ PD +Y+ LIK K+ EA M G N + N +++ ++ +F EA
Sbjct: 533 GVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEA 592
Query: 485 HDIVKTSKERGI 496
++ + + G+
Sbjct: 593 RELFEQMRREGL 604
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 169/362 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P +Y +ID K ++ AY F +M + PD TY +I G+C+ G V EA
Sbjct: 253 GIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEA 312
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L +M P+ TYT LIDG+C ++ E F + M + + PN T +L G
Sbjct: 313 DKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADG 372
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +C + A ELL + N+L+ L +A +++ M G+ P+
Sbjct: 373 LCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPD 432
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T+ + ++ +L + R ++P T+ +LM +G +G++ L
Sbjct: 433 AVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLK 492
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++ N +YN +I +C N M TEI R M + + P+ T+N LI GHCK
Sbjct: 493 WMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKAR 552
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L ++ GF ++N++I + +F +A + +M G+ + YN
Sbjct: 553 NMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYN 612
Query: 365 IL 366
I
Sbjct: 613 IF 614
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 97/182 (53%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G KP+ +T+N +I LC+ + +A L EM+ G+ P+ + Y LI C +G+V+ +
Sbjct: 218 GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSA 277
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
RLF +MQ +ISPD T+ A+I C+ ++ +A+K F M+ L PD +Y+ALI
Sbjct: 278 YRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDG 337
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
K G+ EA M Q G P+ T + + L + G + A++++ +G+
Sbjct: 338 YCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELN 397
Query: 500 SF 501
+
Sbjct: 398 IY 399
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 142/294 (48%), Gaps = 4/294 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G++P+ Y A+ D L K +D A +M + + +TYN L++G+C+ G +D+
Sbjct: 357 MGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQ 416
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A++L+K ME G+ P+ TYT L+D +C ++ + +L M +R + P T L++
Sbjct: 417 AVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMN 476
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL--YRLSNNSMASEAAAILRKMGDRGY 181
G +LL +E+ + N+L+ Y + NN A+ I R M +G
Sbjct: 477 GFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRAT--TEIYRGMCAKGV 534
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P+ +T++ + ++ E + + +G S+Y L++ YK + +E
Sbjct: 535 VPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARE 594
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
+ ++ LV++ YN+ D M+ E+C E ++ + ++ T NT
Sbjct: 595 LFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 648
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 142/348 (40%), Gaps = 35/348 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P Y A+ID K + A+ QM P+ TY L G+C+ G VD A
Sbjct: 324 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 383
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L+ +M G N+YTY L++G C A + + ++++ M+ P+ T +L+
Sbjct: 384 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 443
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ + +A ELL + ++RE + N L+ + M + +L+ M ++G +P +
Sbjct: 444 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 503
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+T++ + ++ T I +GV P
Sbjct: 504 TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVP--------------------------- 536
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ N+YN++I CK M A + R+M + + ++N LI G K +
Sbjct: 537 --------DGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKK 588
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
+ REL + G D+ +N D + E L+ E +E
Sbjct: 589 FLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIE 636
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%)
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
+D + A + E L + EM G+ PN TYN +I LC G VA + R+ ++M ++ I
Sbjct: 195 LDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGI 254
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
+PD + LI FC++ + A + F M + PD +Y+A+I L ++GR EA +
Sbjct: 255 APDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADK 314
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
F M PD T +++ ++G+ +EA + + G++
Sbjct: 315 LFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLT 360
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 219/448 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ N+++ +K N + A++ + +M + K +T+NI+I+ +C+ G + +A
Sbjct: 181 GVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKA 240
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
V ME G PN+ TY ++ G+C++ RV +L MK + + P+ T SL+ G
Sbjct: 241 KDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISG 300
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A ++ +++ ++ NTL+ N A+A +M +G P
Sbjct: 301 MCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPT 360
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
ST++ + L +E ++ ++G+ P TY +L+ + + +
Sbjct: 361 MSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHD 420
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +Y ++ K N M A ++ +++ + P+++ FN LI GHC ++
Sbjct: 421 EMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNS 480
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V ELL + PD+ TFN+++ CR + E+A + EM G+ P+ I++N
Sbjct: 481 NVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFN 540
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI GD+ + R+ +M +P + T+NAL+Q C+ + + AE+ M++
Sbjct: 541 TLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSK 600
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQT 452
G+ PD+ +Y LI+ + K DE K T
Sbjct: 601 GMTPDDTTYFTLIEGIAKVNIPDENKNT 628
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 217/486 (44%), Gaps = 39/486 (8%)
Query: 16 VIDALVKS----NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
V D L+KS N D A+ F M P T N L+ ++ + A L +M
Sbjct: 153 VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
L +VYT+ I+I+ C ++ + + M+ V PN T ++VHG
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGY------ 266
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
C++ A AIL M + P+S T+
Sbjct: 267 ---------------------CSS--------GRVEAADAILTTMKRQKIEPDSFTYGSL 297
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
++ + L E I + +++G++P Y L++ G Y + + K +
Sbjct: 298 ISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI 357
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+++YN +I D A + +E++++ I+P+ +T+N LI+G+C+ A K
Sbjct: 358 SPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFL 417
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
L +L G KP K T+ S++ L + +R ++A D ++ GV P+ I +N LI C
Sbjct: 418 LHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHC 477
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
+ +V + L + M ++ PD TFN ++Q CR K+E+A + F M G++PD+
Sbjct: 478 SNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHI 537
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
S++ LI + G +A + M G NP T N +++ L + + A +++K
Sbjct: 538 SFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEM 597
Query: 492 KERGIS 497
+G++
Sbjct: 598 VSKGMT 603
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%)
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
RDR + + F+ LI C + E + E G P T NS++ + +R
Sbjct: 143 RDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRT 202
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
E A +EM + + T+NI+I LC G + ++ M+ + P+I T+N +
Sbjct: 203 EAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTI 262
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
+ +C ++E A+ +M + PD+F+Y +LI + K GR +EA + F M Q G
Sbjct: 263 VHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGL 322
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
P + N +++ +G + A ++GIS
Sbjct: 323 RPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGIS 358
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
++I ++ LI+S C + + F M+ + P I T N+L+ F ++N+ E A +
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M L ++ ++++ +I L K G+ +AK ME +G P+ T N I+
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269
Query: 479 GRFEEAHDIVKTSKERGISFKSF 501
GR E A I+ T K + I SF
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSF 292
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 189/384 (49%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ + ++ +DA K + A F QM V P+ FTY L+ G C+ G +D+A
Sbjct: 300 GVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDA 359
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M G PNV TYT+++DG C +VAE VL +M+ V NE +L+HG
Sbjct: 360 IVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHG 419
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F + +A +LL + + + TL++ L + EA ++L KM G P
Sbjct: 420 HFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPN 479
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + L +E +L + G +P TY L++ L KAG E + N
Sbjct: 480 TVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFN 539
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L NV +Y +ID FCK+ +++A + EM D+ ++ + V + +LI G+ K A
Sbjct: 540 KMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQA 599
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ L ++E G + D + + I C + ++A LSEM+ G+ P+ YN
Sbjct: 600 NLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYN 659
Query: 365 ILIRSLCAIGDVARSLRLFQKMQA 388
LIR +G++ + L +M++
Sbjct: 660 CLIRKYQKLGNMEEASSLQNEMES 683
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/495 (25%), Positives = 238/495 (48%), Gaps = 6/495 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L + P+TR N ++ L ++ L F + V P+ FT+NI+I +C+ G + E
Sbjct: 163 LRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLPV----PNVFTFNIVIDFLCKEGELVE 218
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L +M+ +G +P+V TY LIDG+ + EV +++ M++ + T +L++
Sbjct: 219 ARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALIN 278
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ KA+ M+R+ + +V +T + + EA + +M RG +
Sbjct: 279 CFSKFGRMEKAYSYFGE-MKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMM 337
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T+ V L++ +LD + +G+ P TY ++++ L K G+ E D
Sbjct: 338 PNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNV 397
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L+ + + + +N Y +I N +RA ++ +M+++ + ++ + TLI G CK
Sbjct: 398 LSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCK 457
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
D +V + + LL + CG +P+ + +++D L +A + +A+ L ++++ G PN +T
Sbjct: 458 DQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVT 517
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y LI LC G ++ ++ F KM+ + P++ + ALI FC++ + KA M+
Sbjct: 518 YCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMI 577
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G+ D Y++LI +K +A M ++G D Y + +
Sbjct: 578 DKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQ 637
Query: 483 EAHDIVKTSKERGIS 497
EA ++ GI+
Sbjct: 638 EARGVLSEMIGTGIT 652
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 74/144 (51%)
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
PN T+NI+I LC G++ + LF +M+A SPD+ T+N+LI + + +E+ E+
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
M G D +Y+ALI K GR ++A F M++ G + T + ++ +
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317
Query: 478 QGRFEEAHDIVKTSKERGISFKSF 501
+G +EA + + RG+ F
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEF 341
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 4/168 (2%)
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
++++ L +DA+ L+ + + VPPNT T N ++ L RLF +
Sbjct: 138 DTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLPV 197
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
P+++TFN +I C+ ++ +A F M +G PD +Y++LI K G +E
Sbjct: 198 ----PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEE 253
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+Q M ++GC D T N ++ + GR E+A+ K +G+
Sbjct: 254 VEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGV 301
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 234/504 (46%), Gaps = 19/504 (3%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV---- 68
+N +I + + + F +++ +PD T+N L+HG+C + EAL L
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 69 -----------KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
QM +G P V T+ LI+G C RV E ++ M + + + T
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
++V+G+ + D A LL + E ++ + ++ RL + S+A + +M
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
++G P T++ + + ++ +L I+R + P T+ L+ A K G+
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E ++ + + + + +YN +I FCK N D A + M D +P++VTFNT+I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTII 439
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
+C+ V + +LL + G + T+N++I C A D EM+ GV
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P+TIT NIL+ C + +L LF+ +Q +I D +N +I C+ +K+++A
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F S+ G+ PD +Y+ +I +A F M+ NG PD+ T N ++ ++
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 619
Query: 478 QGRFEEAHDIVKTSKERGISFKSF 501
G +++ +++ + G S +F
Sbjct: 620 AGEIDKSIELISEMRSNGFSGDAF 643
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 219/489 (44%), Gaps = 23/489 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSI-----------DLAYLK----FQQMSVDQCKPDRFTY 48
LG P +N ++ L + I + +L+ F QM P T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 49 NILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
N LI+G+C G V EA LV +M G G +V TY +++G C +L M+E
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHK--AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
++ P+ +++ + C D H A L +E+ N ++ +
Sbjct: 290 THIKPDVVIYSAIIDRL--CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
S+A +LR M +R P+ TF+ ++ V L E + D + R + P TY +
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ K R + H+F +V ++N +ID +C+ +D ++ RE+ R +
Sbjct: 408 IYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
N T+NTLI G C+ ++ ++L ++ G PD T N ++ C + E+AL+
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
+ + +T+ YNI+I +C V + LF + + PD+ T+N +I FC
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ I A F M G PDN +Y+ LI+ +K+G D++ + M NG + D++
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Query: 467 TSNLILETL 475
T + E +
Sbjct: 644 TIKMAEEII 652
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/513 (25%), Positives = 225/513 (43%), Gaps = 51/513 (9%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N VI V+ N D+A +++M + + + +++NILI C + +L ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
LG+ P+V T+ L+ G C R++E + M E A +V L P
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVE---IGLTP-- 224
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
++I F NTL+ L EAAA++ KM +G + T+ V
Sbjct: 225 ---VVITF------------NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
+ D +L + +KP Y +++ L K G + + + + +
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV +YN +ID FC A + R+M +R+I P+++TFN LIS K+ ++ + +L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 314 -VMLLECGF------------------------------KPDKFTFNSMIDCLCRAHRFE 342
ML C F PD TFN++ID CRA R +
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+ + L E+ G+ NT TYN LI C + ++ + LFQ+M + + PD T N L+
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
FC K+E+A + F + + D +Y+ +I + K + DEA F S+ +G
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
PD T N+++ + +A+ + K+ G
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 178/397 (44%), Gaps = 22/397 (5%)
Query: 115 EATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILR 174
E ++S H F+ LD A + + P + CN ++ + A ++ R
Sbjct: 74 ELKLKSGSH-YFKSLD--DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYR 130
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM------- 227
KM R +F+ + C L+ + K G +P T+ L+
Sbjct: 131 KMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED 190
Query: 228 ---EALYKAGRDVEGD-----RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
EAL G VE + + + L V ++N +I+ C + A +
Sbjct: 191 RISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
+M + + ++VT+ T+++G CK + LL + E KPD ++++ID LC+
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
DA SEM+E G+ PN TYN +I C+ G + + RL + M I+PD+ TFN
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
ALI + + K+ +AEK ML + PD +Y+++I K RFD+AK F M
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM--- 427
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+PD T N I++ + R +E +++ RG+
Sbjct: 428 -ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 183/416 (43%), Gaps = 14/416 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ Y +++ + K A +M KPD Y+ +I +C+ G +A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +M G APNV+TY +IDGFC+ R ++ R+L M ER + P+ T +L+
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +L + R + N+++Y ++ +A + M P+
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PD 431
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL-----YKAGRDVEG 239
TF+ + ++E +L +RG+ +TY L+ A +D+
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + V D + N+ Y FC+ ++ A E+ ++ I + V +N +I G
Sbjct: 492 EMISHGVCPDTITCNILLYG-----FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK ++V + +L L G +PD T+N MI C DA +M + G P+
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPD 606
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
TYN LIR G++ +S+ L +M+++ S D +T + CR++ E E
Sbjct: 607 NSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIE 662
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 124/271 (45%), Gaps = 15/271 (5%)
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ +++ + R N VI F ++N D A + R+M R I N+ +FN LI C
Sbjct: 93 FFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFC 152
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS------------ 349
++ + L + GF+PD TFN+++ LC R +AL
Sbjct: 153 DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVA 212
Query: 350 ---EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
+MVE G+ P IT+N LI LC G V + L KM + D+ T+ ++ C
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+M + A M ++PD YSA+I L K G +A+ F M + G P+ +
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T N +++ GR+ +A +++ ER I+
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 35/173 (20%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNIL--------- 51
IS G+ +T YN +I + ++++ A FQ+M PD T NIL
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 52 --------------------------IHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTI 85
IHG+C+ VDEA L + G P+V TY +
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELL 138
+I GFC +++ + MK+ P+ +T +L+ G + + K+ EL+
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/495 (23%), Positives = 231/495 (46%), Gaps = 2/495 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G + S NA+I +LV+ ++LA+ +Q++S + +T NI+++ +C+ G +++
Sbjct: 185 GYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKV 244
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +++ G P++ TY LI + + + E F ++ M + P T ++++G
Sbjct: 245 GTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVING 304
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A E+ + +LL A E I M R +P+
Sbjct: 305 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPD 364
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F ++ +L++ ++ + G+ P Y +L++ + G E N
Sbjct: 365 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRN 424
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +V +YN ++ CK M+ A ++ EM +R + P+ T LI GHCK
Sbjct: 425 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLG 484
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ EL + E K D T+N+++D + + A + ++MV + P I+++
Sbjct: 485 NLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFS 544
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
IL+ +LC+ G ++ + R++ +M + I P + N++I+ +CR E M++
Sbjct: 545 ILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISE 604
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSME--QNGCNPDSYTSNLILETLVQQGRFE 482
G PD SY+ LI +K +A ME Q G PD +T N IL ++ + +
Sbjct: 605 GFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMK 664
Query: 483 EAHDIVKTSKERGIS 497
EA +++ ERG++
Sbjct: 665 EAEAVLRKMIERGVN 679
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 209/462 (45%), Gaps = 2/462 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN +I A ++ A+ M P +TYN +I+G+C+ G + A
Sbjct: 255 GVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERA 314
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G +P+ TY L+ C E + M+ R+V P+ S++
Sbjct: 315 KEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSL 374
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + KA E + ++ L+ M SEA + +M +G +
Sbjct: 375 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMD 434
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L L E + + +RG+ P T +L++ K G
Sbjct: 435 VVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFK 494
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + R+ +V +YN ++D F KV +D A EI +M ++I P ++F+ L++ C
Sbjct: 495 KMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKG 554
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + ++ KP NSMI CR+ D L +M+ G P+ I+YN
Sbjct: 555 HLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYN 614
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADR--ISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
LI +++++ L +KM+ + + PD++T+N+++ FCR N++++AE M+
Sbjct: 615 TLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMI 674
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
G+ PD +Y++LI + EA + M Q G +PD
Sbjct: 675 ERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 186/433 (42%), Gaps = 12/433 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP YN VI+ L K + A F +M PD TY L+ C+ G E
Sbjct: 290 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVET 349
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M P++ ++ ++ F + + + +KE + P+ L+ G
Sbjct: 350 ENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 409
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R +A L +++ + NT+L+ L M EA + +M +RG P+
Sbjct: 410 YCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPD 469
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-DVEG 239
S YT+T L+ G +L + ++ +K TY L++ K G D
Sbjct: 470 S----YTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAK 525
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + + V K+ L + + S++++++ C + A + EM + I P ++ N++I G
Sbjct: 526 EIWADMVSKEILPTPI-SFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKG 584
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE--WGVP 357
+C+ L ++ GF PD ++N++I + A + +M E G+
Sbjct: 585 YCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLV 644
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P+ TYN ++ C + + + +KM ++PD T+ +LI F + + +A +
Sbjct: 645 PDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRF 704
Query: 418 FFSMLTLGLRPDN 430
ML G PD+
Sbjct: 705 HDEMLQRGFSPDD 717
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 112/244 (45%)
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
SN + ++++I F + + A E +R + ++ N LI + V +
Sbjct: 153 SNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRI 212
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+ G + +T N M++ LC+ + E LSE+ E GV P+ +TYN LI + +
Sbjct: 213 YQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSS 272
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G + + L M + SP +YT+N +I C+ K E+A++ F ML GL PD+ +
Sbjct: 273 QGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 332
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y +L+ K G E + F M PD + ++ + G ++A + K
Sbjct: 333 YRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 392
Query: 493 ERGI 496
E G+
Sbjct: 393 EAGL 396
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%)
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
F+ +I +A + +A + + + G + N LI SL IG V + R++Q++
Sbjct: 158 FDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEIS 217
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ ++YT N ++ + C+ K+EK + G+ PD +Y+ LI A G +
Sbjct: 218 RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLME 277
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
EA + +M G +P YT N ++ L + G++E A ++ G+S
Sbjct: 278 EAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS 327
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 23/202 (11%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE-WGVP----------------PNTITY 363
FK + ++MI L R+ R DA C+ M+ GV N +
Sbjct: 99 FKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVF 158
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
++LIR+ + + F +++ + I NALI S R+ +E A + + +
Sbjct: 159 DLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISR 218
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLS-MEQNGCNPDSYTSNLILETLVQQGRFE 482
G+ + ++ + ++ AL K G+ ++ TFLS +++ G PD T N ++ QG E
Sbjct: 219 SGVGVNVYTLNIMVNALCKDGKMEKVG-TFLSEVQEKGVYPDIVTYNTLISAYSSQGLME 277
Query: 483 EAHDIVKTSKERGISFKSFPGL 504
EA +++ +G S PG+
Sbjct: 278 EAFELMHAMPSKGFS----PGV 295
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 230/488 (47%), Gaps = 16/488 (3%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
RLY AL+ + +++ A V QC F N G + EA+ +V +
Sbjct: 135 RLYIVSATALIGNKNLERAN------EVMQCMVMNFAEN---------GKLKEAVNMVVE 179
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M+ G P+ T ++D V + M +R V P+ + + +V
Sbjct: 180 MQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGR 239
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A L +ER + C ++ + KM + G P F
Sbjct: 240 VLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTA 299
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR-YLNHVFKD 249
+ L + + +L+ ++RG KP T+ L++ L K G + R +L V D
Sbjct: 300 LINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSD 359
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
NV++Y +I+ +CK + ++RA + M+++ + PN T+ TLI GHCK +
Sbjct: 360 GYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRA 419
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
EL+ ++ + GF P+ +T+N++ID LC+ ++A L+++ G+ + +TY IL+
Sbjct: 420 YELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSV 479
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
C D RSL F KM +PDI+++ LI +FCR +++++E+ F ++LGL P
Sbjct: 480 HCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPT 539
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y+++I + G A + F M +GC PDS T ++ L ++ + ++A ++
Sbjct: 540 KKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYD 599
Query: 490 TSKERGIS 497
++G+S
Sbjct: 600 AMMDKGLS 607
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 198/425 (46%), Gaps = 1/425 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PST+ N V+D V +++A F +M PD ++ +++ C +G V EA
Sbjct: 184 GLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEA 243
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R + M G+ + T T++ID FC V V M E + PN +L++G
Sbjct: 244 ERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALING 303
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDRGYLP 183
+ + +AFELL + R TL+ L +A + K+ GY P
Sbjct: 304 LCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKP 363
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ + LN +L ++G+ P +TY L++ K G V +
Sbjct: 364 NVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELM 423
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K+ N+ +YN +ID CK +D A + ++ + + VT+ L+S HC+
Sbjct: 424 DLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQ 483
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
A+ +++ +L+ GF PD ++ ++I CR + +++ E V G+ P TY
Sbjct: 484 ADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTY 543
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+I C G+ + +++LFQ+M +PD T+ ALI C+ +K++ A + +M+
Sbjct: 544 TSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMD 603
Query: 424 LGLRP 428
GL P
Sbjct: 604 KGLSP 608
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 186/420 (44%), Gaps = 39/420 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G++P+ + A+I+ L K SI A+ ++M KP+ +T+ LI G+C+ G ++
Sbjct: 288 MGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEK 347
Query: 64 ALRL-VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A RL +K + GY PNV+TYT +I+G+C ++ +L M+E+ + PN T +L+
Sbjct: 348 AFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLI 407
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G + + +A+EL + MG G+
Sbjct: 408 DGHCKVGNFVRAYEL-----------------------------------MDLMGKEGFS 432
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T++ + L L+E +L+ G++ TY +LM + +
Sbjct: 433 PNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVF 492
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
N + K +++SY +I FC+ M + + E + P T+ ++I G+C+
Sbjct: 493 FNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCR 552
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+L + G PD T+ ++I LC+ + +DA + M++ G+ P +T
Sbjct: 553 YGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVT 612
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
L C D + ++ + +++ + I T N L++ C K++ A F +L
Sbjct: 613 RLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKLL 669
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 3/176 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G +P Y +I + + + F++ P + TY +I G CR G
Sbjct: 499 VGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSL 558
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A++L ++M G AP+ TY LI G C ++ + + + M ++ + P E T +L +
Sbjct: 559 AVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAY 618
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+ D A +L R +R+ + NTL+ +L + AA K+ D+
Sbjct: 619 EYCKKDDSSTAINVLDRLEKRQWIR---TVNTLVRKLCSEGKLDMAALFFHKLLDK 671
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 230/492 (46%), Gaps = 2/492 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P R NA++ L K DL+ F+ M K FTYNI+I +C+ G ++ A
Sbjct: 216 VFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMAR 275
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L QM+ G+ P++ TY LIDG + E + E MK+ + P+ T +L++
Sbjct: 276 SLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCF 335
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KAFE L M+ L +V +T + M EA M P
Sbjct: 336 CKFERMPKAFEFLHE-MKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPN 394
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + +L E +++ ++ G+K TY L++ L + GR E +
Sbjct: 395 EFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFR 454
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N +Y ++ F K M+ A +I +EM+++ I P+L+ + T++ G C ++
Sbjct: 455 AMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNES 514
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + L+ + E G + + +++D ++ + +AL L EM++ G+ +TY
Sbjct: 515 RLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYC 574
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI LC G V ++ F +M + P++ + AL+ C+ N E A+K F ML
Sbjct: 575 ALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDK 634
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ PD +Y+ALI +K G EA M + G D + ++ L G+ ++A
Sbjct: 635 GMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKA 694
Query: 485 HDIVKTSKERGI 496
+++ +G+
Sbjct: 695 RNLLDEMIGKGV 706
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 196/456 (42%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P YN++ID K +D F+QM C PD TYN LI+ C+ + +A
Sbjct: 285 GFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKA 344
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M+ G PNV TY+ ID FC + E + M+ + PNE T SL+
Sbjct: 345 FEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDA 404
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A +L+ ++ + LL L EA + R M + G P
Sbjct: 405 NCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPN 464
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ V + ++ IL ++ +KP Y ++ L R E +
Sbjct: 465 QETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIG 524
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + +N Y ++D + K A + EM D + VT+ LI G CK
Sbjct: 525 EIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSG 584
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V + + E G +P+ + +++D LC+ + FE A EM++ G+ P+ I Y
Sbjct: 585 LVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYT 644
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI G++ +L L +M + D++ + ALI +++KA M+
Sbjct: 645 ALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGK 704
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
G+ PD Y LIK G+ DEA + M + G
Sbjct: 705 GVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 740
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 203/454 (44%), Gaps = 56/454 (12%)
Query: 64 ALRLVKQMEG-LGYAPNVYTYTILID-GFC-------NA--------KRVAEVFRVLEIM 106
ALR + +G +G+ Y IL+ FC NA +RV + V +++
Sbjct: 115 ALRFFEWAKGRIGFQHTSEAYCILVHILFCARFYSDANAVLKELICLRRVLPSWDVFDLL 174
Query: 107 -KERNVC-PNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNS 164
RNVC P +L + +A E ++ + + CN LL+RLS
Sbjct: 175 WATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVG 234
Query: 165 MASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYL 224
+ + MG G IKR V TY
Sbjct: 235 RGDLSRKFFKDMGAAG-------------------------------IKRSV----FTYN 259
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
++++ L K G D+E R L K+ ++ +YN +ID K+ ++D I +M+D
Sbjct: 260 IMIDYLCKEG-DLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKD 318
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
D P+++T+N LI+ CK + K E L + G KP+ T+++ ID C+ ++
Sbjct: 319 ADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQE 378
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A+ +M + PN TY LI + C G++A +L+L +++ I ++ T+ AL+
Sbjct: 379 AIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLD 438
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
C ++++AE+ F +ML G+ P+ +Y+AL+ IK+ + AK M++ P
Sbjct: 439 GLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKP 498
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
D IL L + R EEA ++ KE GI+
Sbjct: 499 DLLLYGTILWGLCNESRLEEAKLLIGEIKESGIN 532
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 173/383 (45%), Gaps = 35/383 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ ++P+ Y ++IDA K+ ++ A +++ K + TY L+ G+C G + E
Sbjct: 389 VALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKE 448
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + + M G APN TYT L+ GF AK + +L+ MKE+ + P+ +++
Sbjct: 449 AEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILW 508
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ +A L+ E T ++ TL+ + A+EA +L +M D G +
Sbjct: 509 GLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIA 568
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ C ++D K G L+ EA++ GR E
Sbjct: 569 TEVTY----------------CALIDGLCKSG---------LVQEAMHHFGRMSEIG--- 600
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
L NV Y ++D CK N + A ++ EM D+ + P+ + + LI G+ K
Sbjct: 601 -------LQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKH 653
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + L ++E G + D + ++I L + + + A + L EM+ GV P+ + Y
Sbjct: 654 GNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVY 713
Query: 364 NILIRSLCAIGDVARSLRLFQKM 386
LI+ A+G V +L L +M
Sbjct: 714 MCLIKKYYALGKVDEALELQNEM 736
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 123/286 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ Y A++ +K+ ++ A ++M KPD Y ++ G+C ++EA
Sbjct: 460 GVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEA 519
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +++ G N YT L+D + + + E +LE M + + E T +L+ G
Sbjct: 520 KLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDG 579
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A R E V L+ L N+ A + +M D+G +P+
Sbjct: 580 LCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPD 639
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + +L E + D I+ G++ Y L+ L +G+ + L+
Sbjct: 640 KIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLD 699
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
+ ++ + Y +I + + +D A E+ EM R + L
Sbjct: 700 EMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGL 745
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S +G+ P+ +Y A++D L K+N ++A F +M PD+ Y LI G + G
Sbjct: 596 MSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGN 655
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ EAL L +M +G +++ YT LI G ++ +V + +L+ M + V P+E
Sbjct: 656 LQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMC 715
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLT 148
L+ + +A EL +R +T
Sbjct: 716 LIKKYYALGKVDEALELQNEMAKRGMIT 743
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 226/494 (45%), Gaps = 9/494 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I+ + + P R +A++ LVK LA F M +PD + Y +I +C +
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A ++ ME G N+ Y +LIDG C ++V E + + + +++ P+ T +
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
LV+G+ + + E++ + + ++L+ L EA +++++ D G
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P ++ + L G +E + D K G++P TY +L++ + G+
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+L + L +V YN +I+ CK + A EM ++ + P +VT+ +L+ G+
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C +++K L + G P +TF +++ L RA DA+ +EM EW V PN
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TYN++I C GD++++ ++M I PD Y++ LI C + +A K F
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVD 601
Query: 421 MLTLG-LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ- 478
L G + Y+ L+ + G+ +EA M Q G + D ++++ ++
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHK 661
Query: 479 ------GRFEEAHD 486
G +E HD
Sbjct: 662 DRKLFFGLLKEMHD 675
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/523 (25%), Positives = 219/523 (41%), Gaps = 43/523 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G+SP+ +YNA+ID+L K A L F +M +P+ TY+ILI CR G +D
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDT 420
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL + +M G +VY Y LI+G C ++ + M + + P T SL+
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G +KA L + TLL L + +A + +M + P
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP 540
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + D+++ L ++G+ P +Y L+ L G+ E ++
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K N Y ++ FC+ ++ A +C+EM R + +LV + LI G K
Sbjct: 601 DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK- 659
Query: 304 AEVHKTRELLVMLL----ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
HK R+L LL + G KPD + SMID + F++A M+ G PN
Sbjct: 660 ---HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISP-------------------------- 393
+TY +I LC G V + L KMQ P
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELH 776
Query: 394 ---------DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+ T+N LI+ FCR +IE+A + M+ G+ PD +Y+ +I L +
Sbjct: 777 NAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN 836
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+A + + SM + G PD N ++ G +A ++
Sbjct: 837 DVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 209/479 (43%), Gaps = 16/479 (3%)
Query: 1 ISFLGISPSTRL------YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHG 54
+SFLG T L YN++I+ K I A +M + +P TY L+ G
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 55 ICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPN 114
C G +++ALRL +M G G AP++YT+T L+ G A + + ++ M E NV PN
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 115 EATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILR 174
T ++ G D KAFE L E+ + L++ L ASEA +
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV- 600
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
D + + T L+ G L E + ++RGV Y +L++
Sbjct: 601 ---DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
K L + L + Y +ID K A I M + PN
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH-RFEDALDCLS 349
VT+ +I+G CK V++ L + P++ T+ +D L + + A++ L
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE-LH 776
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
+ G+ NT TYN+LIR C G + + L +M D +SPD T+ +I CR N
Sbjct: 777 NAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN 836
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
++KA + + SM G+RPD +Y+ LI +G +A + M + G P++ TS
Sbjct: 837 DVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTS 895
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 134/602 (22%), Positives = 234/602 (38%), Gaps = 111/602 (18%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI P +Y VI +L + + A M C + YN+LI G+C+ V E
Sbjct: 221 VGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWE 280
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER---NVCPNEATVRS 120
A+ + K + G P+V TY L+ G C +V E LE+M E P+EA V S
Sbjct: 281 AVGIKKDLAGKDLKPDVVTYCTLVYGLC---KVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
LV G+ + +A L+ R ++ V N L+ L EA + +MG G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 181 YLPESSTFD-------------------------------YTVTCLVTGL----DLNETC 205
P T+ Y L+ G D++
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
G + I + ++P TY LM G+ + R + + + ++ ++ ++
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
+ ++ A ++ EM + ++ PN VT+N +I G+C++ ++ K E L + E G PD
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Query: 326 FTFNSMIDCLC-----------------------------------RAHRFEDALDCLSE 350
+++ +I LC R + E+AL E
Sbjct: 578 YSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQE 637
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
MV+ GV + + Y +LI D L ++M + PD + ++I + +
Sbjct: 638 MVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD 697
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME---------QNGC 461
++A + M+ G P+ +Y+A+I L K+G +EA+ M+ GC
Sbjct: 698 FKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGC 757
Query: 462 NPD--------------------------SYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
D + T N+++ +QGR EEA +++ G
Sbjct: 758 FLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDG 817
Query: 496 IS 497
+S
Sbjct: 818 VS 819
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 188/415 (45%), Gaps = 1/415 (0%)
Query: 83 YTILIDGFCNAKRVAEVFRVLEIMKER-NVCPNEATVRSLVHGVFRCLDPHKAFELLIRF 141
+ +LI + ++RV + V ++M + ++ P T+ +L+HG+ + A EL
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 142 MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
+ + ++ L S A ++ M G ++ + L +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 202 NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
E GI + +KP TY L+ L K G ++ + R + + + +
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
++ K ++ A + + + D ++PNL +N LI CK + H+ L + + G
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
+P+ T++ +ID CR + + AL L EMV+ G+ + YN LI C GD++ +
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
+M ++ P + T+ +L+ +C KI KA + + M G+ P ++++ L+ L
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++G +A + F M + P+ T N+++E ++G +A + +K E+GI
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 159/368 (43%), Gaps = 1/368 (0%)
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR-GYLPESSTFD 189
P F +L E+ L+ + L+ + + + + M + LPE T
Sbjct: 137 PSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLS 196
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
+ LV + + + G++P Y ++ +L + + H+
Sbjct: 197 ALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEAT 256
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
N+ YN++ID CK + A I +++ +D+ P++VT+ TL+ G CK E
Sbjct: 257 GCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIG 316
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
E++ +L F P + +S+++ L + + E+AL+ + +V++GV PN YN LI S
Sbjct: 317 LEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
LC + LF +M + P+ T++ LI FCR K++ A M+ GL+
Sbjct: 377 LCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLS 436
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+ Y++LI K G A+ M P T ++ +G+ +A +
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 490 TSKERGIS 497
+GI+
Sbjct: 497 EMTGKGIA 504
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 122/257 (47%)
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ K L+ V + + ++ K A E+ +M I P++ + +I C+ +
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + +E++ + G + +N +ID LC+ + +A+ ++ + P+ +TY
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L+ LC + + L + +M R SP ++L++ + KIE+A ++ G
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ P+ F Y+ALI +L K +F EA+ F M + G P+ T +++++ ++G+ + A
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 486 DIVKTSKERGISFKSFP 502
+ + G+ +P
Sbjct: 423 SFLGEMVDTGLKLSVYP 439
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 130/330 (39%), Gaps = 37/330 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P T Y +I L + A + + C+ + Y L+HG CR G ++EA
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + ++M G ++ Y +LIDG K F +L+ M +R + P++ S++
Sbjct: 632 LSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDA 691
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D +AF + + + ++ ++ L +EA + KM +P
Sbjct: 692 KSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPN 751
Query: 185 SSTFDYTVTCLVTG-LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ + L G +D+ + + + +K G+ +TY +L+ + GR E +
Sbjct: 752 QVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELI 810
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVN---------------------------------- 269
+ D + + +Y +I+ C+ N
Sbjct: 811 TRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVA 870
Query: 270 -MMDRATEICREMRDRDIAPNLVTFNTLIS 298
M +ATE+ EM + + PN T T S
Sbjct: 871 GEMGKATELRNEMLRQGLIPNNKTSRTTTS 900
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 229/527 (43%), Gaps = 35/527 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP L+ I+A K ++ A F +M P+ T+N +I G+ G DEA
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++M G P + TY+IL+ G AKR+ + + VL+ M ++ PN +L+
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+KA E+ + + NTL+ N A A +L++M G+
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+F + L + L + + + R + P L+ L K G+ +
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
V + + N ++ C+ +D A I +E+ R + V++NTLISG C
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 305 EV--------------------------------HKTRELLVMLLEC---GFKPDKFTFN 329
++ +K E + +C G PD +T++
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
MID C+A R E+ + EM+ V PNT+ YN LIR+ C G ++ +L L + M+
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
ISP+ T+ +LI+ ++++E+A+ F M GL P+ F Y+ALI K G+ +
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 734
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ M +P+ T +++ + G EA ++ +E+GI
Sbjct: 735 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 208/458 (45%), Gaps = 7/458 (1%)
Query: 43 PDRFTYNILIHGICRIGVVD---EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV 99
P + T NIL+ + R EA +V + G +P+VY +T I+ FC +V E
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAFDVVCK----GVSPDVYLFTTAINAFCKGGKVEEA 279
Query: 100 FRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
++ M+E V PN T +++ G+ C +AF + +ER + + L+
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
L+ +A +L++M +G+ P ++ + + LN+ I D + +G+
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
STY L++ K G+ +R L + N S+ VI C M D A
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
EM R+++P TLISG CK + K EL L GF D T N+++ LC A
Sbjct: 460 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 519
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ ++A E++ G + ++YN LI C + + +M + PD YT++
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 579
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI MNK+E+A + + G+ PD ++YS +I K+ R +E ++ F M
Sbjct: 580 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 639
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
P++ N ++ + GR A ++ + K +GIS
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 207/445 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ +YN +ID+ +++ S++ A M TYN LI G C+ G D A
Sbjct: 360 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 419
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL+K+M +G+ N ++T +I C+ R + M RN+ P + +L+ G
Sbjct: 420 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 479
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + KA EL +F+ + + N LL+ L EA I +++ RG + +
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+++ ++ L+E LD +KRG+KP TY +L+ L+ + E ++ +
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
++ ++ +V +Y+++ID CK + E EM +++ PN V +N LI +C+
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ EL + G P+ T+ S+I + R E+A EM G+ PN Y
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 719
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI +G + + L ++M + + P+ T+ +I + R + +A + M
Sbjct: 720 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 779
Query: 425 GLRPDNFSYSALIKALIKSGRFDEA 449
G+ PD+ +Y I +K G EA
Sbjct: 780 GIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 1/181 (0%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G P K T N ++ L RA+ F+ + ++V GV P+ + I + C G V +
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEA 279
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
++LF KM+ ++P++ TFN +I + ++A M+ G+ P +YS L+K
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
L ++ R +A M + G P+ N ++++ ++ G +A +I +G+S
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Query: 500 S 500
S
Sbjct: 400 S 400
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
ALD + G+ P+ T NIL+ SL + + F + +SPD+Y F I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAIN 268
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+FC+ K+E+A K F M G+ P+ +++ +I L GR+DEA M + G P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
T +++++ L + R +A+ ++K ++G
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKG 360
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y A+ID K + ++M P++ TY ++I G R G V EA
Sbjct: 710 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
RL+ +M G P+ TY I G+ V E F+
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 139/502 (27%), Positives = 234/502 (46%), Gaps = 56/502 (11%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
S + YN ++ L + +D + +M + D +T+N++I+ C++G V EA + +
Sbjct: 156 SLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFM 215
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
+M G +P+ +T T I G+C +K V FRV E M R NE + L+HG
Sbjct: 216 CKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHG---- 267
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
L EA ++ +M D P
Sbjct: 268 -------------------------------LCEAGRIDEAVSLFVRMKDDCCYPNV--- 293
Query: 189 DYTVTCLVTGL---DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
YT T L+ GL ++++ G+LD ++R + P TY L+ +AG R L+
Sbjct: 294 -YTYTALIKGLCRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSL 352
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + LV + +Y ID CK N ++ A + + + ++ N++ ++ LI G+CK +
Sbjct: 353 MKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGK 412
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V + L +L P+ +TFN++I LC A ++AL +MV+ G+ P T+NI
Sbjct: 413 VDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNI 472
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI + GD + + QKM + P T+NA I+ +C K+++AE M G
Sbjct: 473 LIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEG 532
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ PD+F+Y++LIKA K G A SM C P +T +L++Q F++ +
Sbjct: 533 VPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHT----FLSLIKQ-LFDKRY 587
Query: 486 DIVKTSKERGI----SFKSFPG 503
+V+ S E G+ +F PG
Sbjct: 588 -VVEKSGETGVESVSNFGDVPG 608
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/560 (24%), Positives = 237/560 (42%), Gaps = 73/560 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDR--FTYNILIHGICRIGVVD 62
G+SP + I +S +D A+ F++M P+R +YN LIHG+C G +D
Sbjct: 222 GLSPDYFTSTSFILGYCRSKDVDSAFRVFEEM------PNRNEVSYNQLIHGLCEAGRID 275
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA+ L +M+ PNVYTYT LI G C K V + +L+ M ERN+ P+ T SL+
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLI 334
Query: 123 HGVFRCLDPHKAFELLIRFMER-----------------------------EPLTQKLV- 152
G R A+ LL ER + LT++ V
Sbjct: 335 AGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVS 394
Query: 153 CNTLLYRLSNNSM-----ASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGI 207
N ++Y + + EA + KM + P + TF+ + L + +L E +
Sbjct: 395 ANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSL 454
Query: 208 LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
D +K G+KP T+ +L+ + K G + + L + +YN I+ +C
Sbjct: 455 FDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCS 514
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+ A ++ +M++ + P+ T+ +LI + K + ++L + + +P T
Sbjct: 515 AGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHT 574
Query: 328 FNSMIDCL-----------------------------CRAHRFEDALDCLSEMVEWGVPP 358
F S+I L + F+ ++ EM + G P
Sbjct: 575 FLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTP 634
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
++ Y LI +C + ++ +L+L +MQ + ISP FNA+I C++ K +A
Sbjct: 635 DSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIV 694
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M+ G P LI L + G + F + G N D ++++ +++Q
Sbjct: 695 EDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQ 754
Query: 479 GRFEEAHDIVKTSKERGISF 498
G EE + + ++ G +F
Sbjct: 755 GLVEEFSQLFEEMEKNGCNF 774
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 197/476 (41%), Gaps = 51/476 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P R Y ID L KSN ++ A F ++ + + Y++LI G C++G VDEA
Sbjct: 357 GLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEA 416
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++M +PN YT+ LI G C+A + E + + M + + P T L+
Sbjct: 417 GCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGR 476
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + D A + L + M N + + EA ++ +M + G P+
Sbjct: 477 MLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPD 536
Query: 185 SSTFDYTVTCLVTG---LDLNETC-GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
D+T T L+ L L + +L + +P T+L L++ L+
Sbjct: 537 ----DFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDK------- 585
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDC-FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
RY+ + V +V+++ V K+ D E+ EM P+ + LISG
Sbjct: 586 RYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISG 645
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK + +LL + + G P + FN++I C C+ ++ +A + + +M+ G P
Sbjct: 646 ICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQ 705
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
LI L G+ R +F+K++
Sbjct: 706 LEHCKTLICGLYEEGETERGNSVFKKLRG------------------------------- 734
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G D ++ LI ++K G +E Q F ME+NGCN T +++ + L
Sbjct: 735 ----CGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 142/367 (38%), Gaps = 41/367 (11%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ +N +I ++K D A+ Q+M KP TYN I C G V E
Sbjct: 461 MGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQE 520
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ QM+ G P+ +TYT LI + F VL+ M + + P+ T SL+
Sbjct: 521 AEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIK 580
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+F + ++ K G+ G
Sbjct: 581 QLF-----------------------------------------DKRYVVEKSGETGVES 599
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
S+ D + + ++ + + + K G P Y L+ + K + L
Sbjct: 600 VSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLL 659
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K+ + + +N VI C CK+ A I +M +P L TLI G ++
Sbjct: 660 DQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEE 719
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E + + L CG+ D+ + +ID + + E+ EM + G + TY
Sbjct: 720 GETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTY 779
Query: 364 NILIRSL 370
+IL + L
Sbjct: 780 SILTQKL 786
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 134/498 (26%), Positives = 221/498 (44%), Gaps = 49/498 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++ + ++YN +IDA K I A + M CKPD TYN LI G CR G V EA
Sbjct: 304 GLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEA 363
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L++Q G G PN ++YT LI +C L M ER P+ T +LVHG
Sbjct: 364 DQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHG 423
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A + + +ER + N L+ L A +L +M D+ LP+
Sbjct: 424 LVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPD 483
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + V + +L+E + + I++G+ P
Sbjct: 484 AFVYATLVDGFIRNGNLDEARKLFELTIEKGMNP-------------------------- 517
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ YN +I +CK MM A M+ R +AP+ T++T+I G+ K
Sbjct: 518 ---------GIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQH 568
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ +++ +++ KP+ T+ S+I+ CR +L EM G+ PN +TY+
Sbjct: 569 DLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYS 628
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA------- 417
ILI S C + + F++M ++ P+ TFN L+ F + +EK
Sbjct: 629 ILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENK 688
Query: 418 -------FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
F M++ G P + +Y++++ L + G F A Q M GC PDS +
Sbjct: 689 QSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVA 748
Query: 471 ILETLVQQGRFEEAHDIV 488
+L + +GR +E +IV
Sbjct: 749 LLHGVCLEGRSKEWKNIV 766
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 227/505 (44%), Gaps = 14/505 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN +ID K +++A F ++ + P TY +I+G C+ G
Sbjct: 234 GCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAI 293
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL+ +M G NV Y +ID + + +E M E P+ T +L+ G
Sbjct: 294 DRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISG 353
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R +A +LL + + + + K L++ A+ L +M +RG+ P+
Sbjct: 354 SCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPD 413
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ V LV +++ I + ++RGV P Y +LM L K + L
Sbjct: 414 LVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLA 473
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ + Y ++D F + +D A ++ ++ + P +V +N +I G+CK
Sbjct: 474 EMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFG 533
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + + PD+FT++++ID + H + A EMV+ PN +TY
Sbjct: 534 MMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYT 593
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C GD+ RSL++F++MQA + P++ T++ LI SFC+ K+ A F ML
Sbjct: 594 SLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMN 653
Query: 425 GLRPDNFSYSALIKALIKSG---------RFDEAKQT-----FLSMEQNGCNPDSYTSNL 470
P++ +++ L+ K+G F E KQ+ F M +G P S N
Sbjct: 654 KCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNS 713
Query: 471 ILETLVQQGRFEEAHDIVKTSKERG 495
IL L Q G F A + +G
Sbjct: 714 ILICLCQYGMFRTALQLSNKMTSKG 738
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/495 (24%), Positives = 214/495 (43%), Gaps = 43/495 (8%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQM-----SVDQCKPDRFTYNILIHGICRIGVVD 62
P N++++ LVK I++A + +M + D+C D ++ I++ G+C+ G ++
Sbjct: 163 PDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRC-VDNYSTCIMVKGLCKEGKLE 221
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
E +L++ G G PN+ Y LIDG+C + + +K + P T +++
Sbjct: 222 EGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAII 281
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKL-VCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+G + D KA + L+ M LT + V NT++ + +A + M
Sbjct: 282 NGFCKKGD-FKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGM----- 335
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
I+ G KP TY L+ + G+ E D+
Sbjct: 336 ------------------------------IECGCKPDIVTYNTLISGSCRDGKVSEADQ 365
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L L+ N SY +I +CK DRA+ EM +R P+LVT+ L+ G
Sbjct: 366 LLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLV 425
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
EV + +LE G PD +N ++ LC+ + A L+EM++ V P+
Sbjct: 426 VAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAF 485
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y L+ G++ + +LF+ ++P I +NA+I+ +C+ ++ A M
Sbjct: 486 VYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRM 545
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
L PD F+YS +I +K D A++ F M + C P+ T ++ ++G
Sbjct: 546 KKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDL 605
Query: 482 EEAHDIVKTSKERGI 496
+ I + + G+
Sbjct: 606 HRSLKIFREMQACGL 620
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 209/490 (42%), Gaps = 32/490 (6%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK-QM 71
Y++++ L +S + + M V++ P R +I+I G+V++AL L +
Sbjct: 97 YSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVL 156
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
+ Y P+V L++ R+ ++ + M E + + RC+D
Sbjct: 157 KTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGD------------RCVDN 204
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
+ C ++ L E ++ +G +P ++
Sbjct: 205 YST------------------C-IMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTL 245
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ D+ G+ +G P TY ++ K G DR L + L
Sbjct: 246 IDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGL 305
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
NV YN +ID K + +A E M + P++VT+NTLISG C+D +V + +
Sbjct: 306 TVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQ 365
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
LL L G P+KF++ +I C+ ++ A + L EM E G P+ +TY L+ L
Sbjct: 366 LLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLV 425
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
G+V +L + +KM + PD +N L+ C+ K+ A+ ML + PD F
Sbjct: 426 VAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAF 485
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
Y+ L+ I++G DEA++ F + G NP N +++ + G ++A +
Sbjct: 486 VYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRM 545
Query: 492 KERGISFKSF 501
K+R ++ F
Sbjct: 546 KKRHLAPDEF 555
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 140/569 (24%), Positives = 256/569 (44%), Gaps = 76/569 (13%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P+ +Y+ +ID ++ + D A+ ++MS +P++ TY+ LI G+C++G
Sbjct: 339 MSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGR 398
Query: 61 VDEALRLVKQMEGLGY-----------------------------------APNVYTYTI 85
+ A R++KQM +GY +PNVYTY+I
Sbjct: 399 MGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSI 458
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
+I+G C +LE M + PN L+ G R A E L + M RE
Sbjct: 459 IINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKK-MTRE 517
Query: 146 PLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF---------------- 188
LT L C N+L+ LSN EA +M ++G+ P T+
Sbjct: 518 NLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKA 577
Query: 189 ---------------DYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEA 229
D+ ++ G +L + L + +++G+ P Y +++
Sbjct: 578 EQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHN 637
Query: 230 LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
L +G L+ + K+ LV + Y +I FCK M++A + EM + I P
Sbjct: 638 LSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPG 697
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+ +N LI G CK ++ R + ++ G P+ T+ ++ID C+A DA+D +
Sbjct: 698 ISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYN 757
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
EM+ GV P+ Y++L GD+ ++L + ++M A R I +FN L+ FC+
Sbjct: 758 EMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIA-RGYAIISSFNTLVHGFCKRG 816
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ-NGCNPDSYTS 468
K+++ K M+ + P + ++ L ++G+ EA F+ ++Q N + D+
Sbjct: 817 KLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHL 876
Query: 469 NLILETLVQQG--RFEEAHDIVKTSKERG 495
+ + ++ QG + H+++++ ++G
Sbjct: 877 SSLFTDMINQGLVPLDVIHNMIQSHCKQG 905
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 237/501 (47%), Gaps = 4/501 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG++PS R N ++ L++++++DL + M PD +TY+ LI C++ ++
Sbjct: 202 LGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLES 261
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++V++M G + NV TY LI G C A + E F + M++ + P+ T ++++
Sbjct: 262 AKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIIN 321
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + P +A LL + +V +TL+ A EA I+++M G P
Sbjct: 322 GLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQP 381
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+D + L + IL K G TY L++E + E L
Sbjct: 382 NKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLL 441
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + K + NV +Y+++I+ C++ +RA+ + +M + PN + LISG+C++
Sbjct: 442 NEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCRE 501
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E L + PD + +NS+I L + ++A++ EM+E G PN TY
Sbjct: 502 GSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTY 561
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI G++ ++ +L +M ++P+ + + +++ + + + +EK SML
Sbjct: 562 GGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLE 621
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL PDN Y +I L SG A +E+NG PDS ++ + E+
Sbjct: 622 KGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEK 681
Query: 484 AHDIVKTSKERGISFKSFPGL 504
A ++ ++GI PG+
Sbjct: 682 AVGLLDEMAKKGIE----PGI 698
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/532 (24%), Positives = 229/532 (43%), Gaps = 35/532 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP Y+ +I+A K ++ A ++M C + TYN LI G+CR G ++EA
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEA 297
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
K+ME G P+ +TY +I+G C R + +L+ M + PN +L+ G
Sbjct: 298 FGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDG 357
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + +AF+++ K+ + L+ L A+ IL++M GY+ +
Sbjct: 358 FMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMAD 417
Query: 185 SSTFD-------------------------------YTVTCLVTGL----DLNETCGILD 209
+ T++ YT + ++ GL + G+L+
Sbjct: 418 TMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLE 477
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
I G+KP Y L+ + G L + ++ L ++ YN +I V
Sbjct: 478 QMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVG 537
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
MD A E EM ++ PN T+ LI G+ + K +LL +L G P+ F +
Sbjct: 538 KMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYA 597
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+++ ++ E L M+E G+ P+ Y I+I +L + G + ++ + ++ +
Sbjct: 598 QILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKN 657
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ PD + +LI FC+ +EKA M G+ P Y+ALI KS A
Sbjct: 658 GLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHA 717
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ F S+ G P+ T +++ + G +A D+ G++ +F
Sbjct: 718 RNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAF 769
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 214/438 (48%), Gaps = 3/438 (0%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVK-QMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
+ FT N L+ + + +A ++ + ++ G N TY LI GFC A + F++
Sbjct: 68 NNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQL 127
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
L MKER P+ T S+V + + +A + +E P ++ N L++ L
Sbjct: 128 LAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAP--DSVLFNILVHGLCK 185
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+ SEA ++ +M +RG +P+ T++ + L + E +L+T +KR V+P T
Sbjct: 186 ANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVT 245
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y L+ K G + + + + +V ++N +I FC+ + +D+A E+ M+
Sbjct: 246 YNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMK 305
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
APNLVT+N LISG C ++ ELL + G PD T+NS+I CR + E
Sbjct: 306 KGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIE 365
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
A + MVE GV P+ I+Y L +L + L M P+++TFN+L+
Sbjct: 366 QAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLM 425
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+ C ++++A M +G P +Y L+ L K+GR D+AK+ + M G
Sbjct: 426 EGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQ 485
Query: 463 PDSYTSNLILETLVQQGR 480
P +S I+ TL ++G+
Sbjct: 486 PLVSSSGTIVHTLAREGK 503
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 196/414 (47%), Gaps = 19/414 (4%)
Query: 99 VFRVLEIMKERNVC----------------PNEATVRSLVHGVFRCLDPHKAFELLI-RF 141
V RVL+++K+ +V N T L+ + + H+A+++
Sbjct: 37 VGRVLQVIKDVDVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDEL 96
Query: 142 MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
+ + T + NTL+ A +L +M +RG+ P+ T V L +L
Sbjct: 97 LGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNL 156
Query: 202 NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
+ ++ P + +L+ L KA + E + + + + +V +V +YN +
Sbjct: 157 SRAMQYFRESVE--CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSL 214
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
ID CK M+ A ++ M R + PNLVT+NTLI G+CK +L+ +++ G
Sbjct: 215 IDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGT 274
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
PD TFNS+I C+ + + A + L M + PN +TYN+LI LC G +
Sbjct: 275 HPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACE 334
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
L +M I PDI T+N+LI FCR +IE+A + M+ G+ PD SY L AL+
Sbjct: 335 LLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALL 394
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
KS RFDEA +M G P+ +T N ++E L R +EA ++ + G
Sbjct: 395 KSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVG 448
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 204/434 (47%), Gaps = 37/434 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP +++++ AL + ++ A F++ SV +C PD +NIL+HG+C+ + EA
Sbjct: 135 GHSPDVVTHSSIVQALCNTGNLSRAMQYFRE-SV-ECAPDSVLFNILVHGLCKANQLSEA 192
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++++M G P+V TY LIDG C + R+ E ++LE M +R V PN T +L++G
Sbjct: 193 RQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYG 252
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
K C L ++L + +M G P+
Sbjct: 253 YC-----------------------KTGCTGLAHQL------------IERMIQSGTHPD 277
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ ++ +++ C +L K P TY +L+ L AGR E L+
Sbjct: 278 VVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLS 337
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ ++ +YN +I FC+ +++A +I M +R + P+ +++ TL K
Sbjct: 338 EMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSE 397
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ LL + + G P+ FTFNS+++ LC + R ++A L+ M G P TY
Sbjct: 398 RFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYE 457
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+L+ LC G V + + M ++ I P + + ++ + R K + A F ++
Sbjct: 458 VLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAA 517
Query: 425 GLRPDNFSYSALIK 438
+ + SY L++
Sbjct: 518 ESKACDPSYQKLLE 531
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 206/419 (49%), Gaps = 3/419 (0%)
Query: 79 NVYTYTILIDGFCNAKRVAEVFRVL-EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFEL 137
N +T L+ A+R + +++ + + ++ N T +L+ G + D +AF+L
Sbjct: 68 NNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQL 127
Query: 138 LIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVT 197
L ER + ++++ L N S A R+ + P+S F+ V L
Sbjct: 128 LAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA--PDSVLFNILVHGLCK 185
Query: 198 GLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNS 257
L+E +++ +RG+ P TY L++ L K+ R E + L + K ++ N+ +
Sbjct: 186 ANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVT 245
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
YN +I +CK A ++ M P++VTFN+LISG C+ +++ K E+L ++
Sbjct: 246 YNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMK 305
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
+ P+ T+N +I LC A R +A + LSEM G+ P+ ITYN LI C +
Sbjct: 306 KGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIE 365
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
++ ++ M + PD ++ L + + + ++A +M G P+ F++++L+
Sbjct: 366 QAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLM 425
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ L S R DEA+ M + GC+P + T +++ L + GR ++A +++ GI
Sbjct: 426 EGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGI 484
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 121/264 (45%), Gaps = 1/264 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P +N++I + + ID A M C P+ TYN+LI G+C G +EA
Sbjct: 273 GTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEA 332
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M+G G P++ TY LI FC ++ + F++ +M ER V P+ + +L
Sbjct: 333 CELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVA 392
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF LL + + N+L+ L + EA +L M G P
Sbjct: 393 LLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPA 452
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ST++ VT L +++ +L + G++P S+ ++ L + G+ Y +
Sbjct: 453 ASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFD 512
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKV 268
V + SY +++ F KV
Sbjct: 513 QVVAAESKACDPSYQKLLE-FVKV 535
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 233/491 (47%), Gaps = 2/491 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + ++ ++ K QM P+ +T NILI+ C + + A +
Sbjct: 57 PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 116
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ LG+ PN+ T+ LI G C ++ EV + + M PN T +L++G+ +
Sbjct: 117 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 176
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
A LL R ME+ +V T ++ L + ++A + +M +G P
Sbjct: 177 VGSTSAAIRLL-RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIF 235
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + L + +L+ + + P + +++AL K G+ +E ++ +
Sbjct: 236 TYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMM 295
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K + NV +YN ++D C + MD A ++ M + AP++V+++TLI+G+CK +
Sbjct: 296 IKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRI 355
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
K L + P+ T+++++ LC R +DA+ EMV G P+ ++Y IL
Sbjct: 356 EKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCIL 415
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ LC + ++ L + ++ + PDI + +I CR ++E A F ++ + GL
Sbjct: 416 LDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGL 475
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P+ ++Y+ +I L + G EA + F M++ G +P+ T NLI ++
Sbjct: 476 HPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQ 535
Query: 487 IVKTSKERGIS 497
+++ RG S
Sbjct: 536 LLQEMLARGFS 546
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 126/477 (26%), Positives = 225/477 (47%), Gaps = 6/477 (1%)
Query: 24 NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTY 83
N++D A F +M P + L+ I ++ L L QM+ G PN+YT
Sbjct: 38 NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTL 97
Query: 84 TILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF-- 141
ILI+ FC+ +R+ F VL + + PN AT +L+ G+ C++ K E+L F
Sbjct: 98 NILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGL--CVEG-KIGEVLHLFDK 154
Query: 142 MEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLD 200
M E +V TL+ L S A +LR M P+ + + L
Sbjct: 155 MIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 214
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
+ + + I +G+ P TY L+ AL LN + +++ NV ++
Sbjct: 215 VTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFST 274
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
V+D CK + A ++ M R + PN+VT+N L+ GHC +E+ + ++ ++ G
Sbjct: 275 VVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKG 334
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
F PD +++++I+ C+ R E A+ EM + PNT+TY+ L+ LC +G + ++
Sbjct: 335 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAI 394
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
LF +M PD ++ L+ C+ ++++A ++ + PD Y+ +I +
Sbjct: 395 ALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGM 454
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
++G + A+ F ++ G +P+ +T +++ L QQG EA + K +G S
Sbjct: 455 CRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYS 511
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 221/485 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ N +I++ + A+ ++ +P+ T+N LI G+C G + E
Sbjct: 89 GIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEV 148
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M G G+ PNV TY LI+G C + R+L M++ N P+ S++
Sbjct: 149 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDS 208
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF L + + N+L++ L N A+L +M + +P
Sbjct: 209 LCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPN 268
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F V L + E ++D IKRGV+P TY LM+ E + +
Sbjct: 269 VVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFD 328
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +V SY+ +I+ +CK+ +++A + EM +++ PN VT++TL+ G C
Sbjct: 329 TMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVG 388
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ L ++ G PD ++ ++D LC+ R ++A+ L + + P+ Y
Sbjct: 389 RLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYT 448
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+I +C G++ + LF + + + P+++T+ +I C+ + +A K F M
Sbjct: 449 IVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRK 508
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G P+ +Y+ + + +++ Q M G + D TS +++E L G +
Sbjct: 509 GYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSV 568
Query: 485 HDIVK 489
I+
Sbjct: 569 KQILS 573
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 233/491 (47%), Gaps = 2/491 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + ++ ++ K QM P+ +T NILI+ C + + A +
Sbjct: 66 PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 125
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ LG+ PN+ T+ LI G C ++ EV + + M PN T +L++G+ +
Sbjct: 126 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 185
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
A LL R ME+ +V T ++ L + ++A + +M +G P
Sbjct: 186 VGSTSAAIRLL-RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIF 244
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + L + +L+ + + P + +++AL K G+ +E ++ +
Sbjct: 245 TYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMM 304
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K + NV +YN ++D C + MD A ++ M + AP++V+++TLI+G+CK +
Sbjct: 305 IKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRI 364
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
K L + P+ T+++++ LC R +DA+ EMV G P+ ++Y IL
Sbjct: 365 EKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCIL 424
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ LC + ++ L + ++ + PDI + +I CR ++E A F ++ + GL
Sbjct: 425 LDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGL 484
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P+ ++Y+ +I L + G EA + F M++ G +P+ T NLI ++
Sbjct: 485 HPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQ 544
Query: 487 IVKTSKERGIS 497
+++ RG S
Sbjct: 545 LLQEMLARGFS 555
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 126/477 (26%), Positives = 225/477 (47%), Gaps = 6/477 (1%)
Query: 24 NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTY 83
N++D A F +M P + L+ I ++ L L QM+ G PN+YT
Sbjct: 47 NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTL 106
Query: 84 TILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF-- 141
ILI+ FC+ +R+ F VL + + PN AT +L+ G+ C++ K E+L F
Sbjct: 107 NILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGL--CVEG-KIGEVLHLFDK 163
Query: 142 MEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLD 200
M E +V TL+ L S A +LR M P+ + + L
Sbjct: 164 MIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 223
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
+ + + I +G+ P TY L+ AL LN + +++ NV ++
Sbjct: 224 VTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFST 283
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
V+D CK + A ++ M R + PN+VT+N L+ GHC +E+ + ++ ++ G
Sbjct: 284 VVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKG 343
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
F PD +++++I+ C+ R E A+ EM + PNT+TY+ L+ LC +G + ++
Sbjct: 344 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAI 403
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
LF +M PD ++ L+ C+ ++++A ++ + PD Y+ +I +
Sbjct: 404 ALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGM 463
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
++G + A+ F ++ G +P+ +T +++ L QQG EA + K +G S
Sbjct: 464 CRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYS 520
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 221/485 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ N +I++ + A+ ++ +P+ T+N LI G+C G + E
Sbjct: 98 GIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEV 157
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M G G+ PNV TY LI+G C + R+L M++ N P+ S++
Sbjct: 158 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDS 217
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF L + + N+L++ L N A+L +M + +P
Sbjct: 218 LCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPN 277
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F V L + E ++D IKRGV+P TY LM+ E + +
Sbjct: 278 VVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFD 337
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +V SY+ +I+ +CK+ +++A + EM +++ PN VT++TL+ G C
Sbjct: 338 TMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVG 397
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ L ++ G PD ++ ++D LC+ R ++A+ L + + P+ Y
Sbjct: 398 RLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYT 457
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+I +C G++ + LF + + + P+++T+ +I C+ + +A K F M
Sbjct: 458 IVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRK 517
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G P+ +Y+ + + +++ Q M G + D TS +++E L G +
Sbjct: 518 GYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSV 577
Query: 485 HDIVK 489
I+
Sbjct: 578 KQILS 582
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 240/507 (47%), Gaps = 20/507 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ +YNA+ID + ++ A F+ M ++C P+ TY LIHG+C+ G V+ A
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +M G PNV TYT LI G CN + FR+L +M+ + PN+ T L+
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A L +++ ++V +L+ L A +++KM G++P+
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ + L L++ +L+ +++G++ TY ++++ L R+V G
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV---REV-GSEGPK 442
Query: 245 HVFKDRLVSNVN----SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+F + + +N +Y + + +C+ M+ A + +M DR + PNLVT+NTLI G+
Sbjct: 443 KIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGY 502
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC------------L 348
V + +++ G+KP++ ++ ++ + + ++++D L
Sbjct: 503 ANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLL 562
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
++ E +P Y+ IR LC + + + F MQ ++P + ++I CR+
Sbjct: 563 EDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRL 622
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+ A SM G P SY +I +L + G F AK+ F + N D
Sbjct: 623 KILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVW 682
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERG 495
+++ L+Q+G E ++ KE G
Sbjct: 683 KILIYGLLQKGSVAEFSSLLSVMKEHG 709
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 127/522 (24%), Positives = 219/522 (41%), Gaps = 47/522 (9%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y A++ L+ + + A F M D C PD Y ++HG+C G +EA L+++
Sbjct: 145 YTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAM 204
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G+ PN+ Y LIDG+CNA + +V E M PN T L+HG+ +
Sbjct: 205 SNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVE 264
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A L R +E + L+ N A +L M G +P TF +
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L + E L + +K+GVK Y L++ L K G+ D + + + V
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+ +SY+ +ID C+ + +AT + +M ++ I + VT+ +I ++ +++
Sbjct: 385 PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKI 444
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
++ G PD T+ + C R EDA + +MV+ GV PN +TYN LIR
Sbjct: 445 FDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYAN 504
Query: 373 IGDVARSLRLFQKMQADRISP--DIYT--------------------------------- 397
+G V+++ F+ M P D YT
Sbjct: 505 LGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLED 564
Query: 398 ------------FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
++ I+ CR++++E+A+ F M L P Y+++I +
Sbjct: 565 ITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKI 624
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+A SM ++G P + +I+ +L + G F A ++
Sbjct: 625 LTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEV 666
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 195/458 (42%), Gaps = 39/458 (8%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
TY LI+ C G + A + + + G AP+ Y YT + G+C A + RV +M
Sbjct: 74 TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
R T +L+HG+ M
Sbjct: 134 PLRGCLRTAFTYTALLHGLL-----------------------------------GAGMV 158
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
EA A+ M P++ + V L E +L+ + G +P Y L
Sbjct: 159 REAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNAL 218
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ AG + + +R NV +Y +I CK ++RA + M + +
Sbjct: 219 IDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGL 278
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN+VT+ LI G C + + LL ++ G P+ +TF+ +ID LC+ + E+A
Sbjct: 279 EPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQL 338
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L +V+ GV N + Y LI LC G + + L QKM ++ PD +++++LI C
Sbjct: 339 FLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC 398
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R K+ +A M+ G++ +Y+ +I L++ + K+ F M G NPD
Sbjct: 399 RQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIV 458
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFPGL 504
T + + + ++GR E+A ++ +RG+ FP L
Sbjct: 459 TYTVFVRSYCEEGRMEDAESMIVQMVDRGV----FPNL 492
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/409 (20%), Positives = 166/409 (40%), Gaps = 48/409 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ ++ +IDAL K ++ A L + K + Y LI G+C+ G +D A
Sbjct: 312 GLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAA 371
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+++M G+ P+ ++Y+ LIDG C K++++ +LE M E+ + + T ++
Sbjct: 372 DELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDE 431
Query: 125 VFRCLD---PHKAFE--------------------------------LLIRFMEREPLTQ 149
+ R + P K F+ ++++ ++R
Sbjct: 432 LVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPN 491
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTG----------- 198
+ NTL+ +N + S+A + M +G+ P ++ + +V
Sbjct: 492 LVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK 551
Query: 199 -LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNS 257
D+ + +L+ +R + Y + L + R E + + L + +
Sbjct: 552 IADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDV 611
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
Y +IDC C++ ++ A + M P+L ++ +IS C+ +E+ LL
Sbjct: 612 YTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLL 671
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV-PPNTITYNI 365
D+ + +I L + + LS M E G P NTI I
Sbjct: 672 LKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTINAMI 720
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 136/540 (25%), Positives = 240/540 (44%), Gaps = 47/540 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F PS YNA+++ LV+ + A+ + +M + PD T+ I I CR
Sbjct: 102 MDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKR 161
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
ALRL+ M G N Y +I GF E + + M + P+ AT
Sbjct: 162 PLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNK 221
Query: 121 LVHGVFRCLDPHK--------------------AFELLI--------------RFMEREP 146
L+H C H F + I + +E E
Sbjct: 222 LMH--ILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAEN 279
Query: 147 LTQKLV----------CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLV 196
K+V NT++Y S +A+ IL+ +G++P+ T+ + +
Sbjct: 280 YLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVC 339
Query: 197 TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVN 256
D++ + + + +G+KP Y L++ L + G ++ + +N + K+ + ++
Sbjct: 340 QDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIW 399
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+YN+VI+ CK+ + A + + P++ TFNTLI G+CK ++ +L +
Sbjct: 400 TYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSM 459
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
G PD T+NS+++ LC+A + ED ++ ++E G PN ITYNILI SLC V
Sbjct: 460 WSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKV 519
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM-LTLGLRPDNFSYSA 435
+L L ++++ + PD +F +I FC +++A + F M + +Y+
Sbjct: 520 TEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNI 579
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+I A + D A++ F M GC+PDSYT ++++ + G +D + E G
Sbjct: 580 MINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIG 639
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 130/501 (25%), Positives = 225/501 (44%), Gaps = 43/501 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD- 62
LGI P +N ++ L K + ++ + P+ FT+NI I G+CR GV++
Sbjct: 210 LGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEG 269
Query: 63 ------EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEA 116
EA + +M G P+ +TY +I G+ ++ + R+L+ K + P+E
Sbjct: 270 ANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEF 329
Query: 117 TVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
T SL+ GV + D A L + + ++ NTL+ LS + +A ++ M
Sbjct: 330 TYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDM 389
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
K G+ P TY L++ L K G
Sbjct: 390 S-----------------------------------KEGMSPDIWTYNLVINGLCKMGCV 414
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
+ + LN + ++ ++N +ID +CK MD A I M + P+++T+N++
Sbjct: 415 SDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSI 474
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
++G CK A+ E M++E G P+ T+N +I+ LC+A + +ALD L E+ G+
Sbjct: 475 LNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGL 534
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAE 415
P+ +++ +I C GD+ + +LF++M Q RI + T+N +I +F ++ A+
Sbjct: 535 IPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQ 594
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
K F M G PD+++Y +I K G + L + G P T ++ L
Sbjct: 595 KLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCL 654
Query: 476 VQQGRFEEAHDIVKTSKERGI 496
Q R EA IV G+
Sbjct: 655 CVQHRVHEAVGIVHLMVRTGV 675
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/471 (25%), Positives = 222/471 (47%), Gaps = 42/471 (8%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F++M C+P F+YN +++ + G ++A ++ +M+ G AP+V T+TI I FC
Sbjct: 99 FERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCR 158
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
KR R+L M + N +++ G +
Sbjct: 159 TKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYE------------------------- 193
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
+ EA + KM G P +TF+ + L L E +L+ +
Sbjct: 194 ----------ENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVL 243
Query: 213 KRGVKPRFSTYLLLMEALYKAG-------RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
K GV P T+ + ++ L + G + VE + YL+ + L + +YN +I +
Sbjct: 244 KNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGY 303
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
KV + A+ I ++ + + P+ T+ +LI G C+D ++ L L G KP
Sbjct: 304 SKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSI 363
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
+N++I L + AL +++M + G+ P+ TYN++I LC +G V+ + L
Sbjct: 364 VLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNA 423
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
A PDI+TFN LI +C+ K++ A SM + G+ PD +Y++++ L K+ +
Sbjct: 424 AIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAK 483
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++ +TF + + GC P+ T N+++E+L + + EA D+++ + RG+
Sbjct: 484 PEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGL 534
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 164/361 (45%), Gaps = 1/361 (0%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G P Y ++I + + ID A F++ KP YN LI G+ + G+V
Sbjct: 321 FKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVL 380
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+AL+L+ M G +P+++TY ++I+G C V++ +L + P+ T +L+
Sbjct: 381 KALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLI 440
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G + L A +L + N++L L + + + + ++G L
Sbjct: 441 DGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCL 500
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T++ + L + E +L+ RG+ P ++ ++ G E +
Sbjct: 501 PNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQL 560
Query: 243 LNHVFKD-RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + R+ V +YN++I+ F + MD A ++ EM D+ P+ T+ +I G C
Sbjct: 561 FRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFC 620
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K V+ + L+ +E GF P TF +I+CLC HR +A+ + MV GV P +
Sbjct: 621 KVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAV 680
Query: 362 T 362
Sbjct: 681 V 681
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD---RISPDIYTFNALIQSFCRMN 409
E G +TY +I L G+ R+ +M+ + + +Y + ++++ R
Sbjct: 33 EDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYV--SAMRNYGRKG 90
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
K+++A F M P FSY+A++ L++ G F++A + +L M+ G PD T
Sbjct: 91 KVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFT 150
Query: 470 LILETLVQQGR 480
+ +++ + R
Sbjct: 151 IRIKSFCRTKR 161
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 8/128 (6%)
Query: 375 DVARSLRLFQKMQA-DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF-- 431
D ++L +F ++ D T+ +I+ + + E+ M L DN
Sbjct: 19 DPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMR---LNVDNSLL 75
Query: 432 --SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
Y + ++ + G+ EA F M+ C P ++ N I+ LV+ G F +AH +
Sbjct: 76 EGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYL 135
Query: 490 TSKERGIS 497
K GI+
Sbjct: 136 RMKHEGIA 143
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 229/527 (43%), Gaps = 35/527 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP L+ I+A K ++ A F +M P+ T+N +I G+ G DEA
Sbjct: 268 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 327
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++M G P + TY+IL+ G AKR+ + + VL+ M ++ PN +L+
Sbjct: 328 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 387
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+KA E+ + + NTL+ N A A +L++M G+
Sbjct: 388 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 447
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+F + L + L + + + R + P L+ L K G+ +
Sbjct: 448 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 507
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
V + + N ++ C+ +D A I +E+ R + V++NTLISG C
Sbjct: 508 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 567
Query: 305 EV--------------------------------HKTRELLVMLLEC---GFKPDKFTFN 329
++ +K E + +C G PD +T++
Sbjct: 568 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 627
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
MID C+A R E+ + EM+ V PNT+ YN LIR+ C G ++ +L L + M+
Sbjct: 628 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 687
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
ISP+ T+ +LI+ ++++E+A+ F M GL P+ F Y+ALI K G+ +
Sbjct: 688 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 747
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ M +P+ T +++ + G EA ++ +E+GI
Sbjct: 748 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 794
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 208/458 (45%), Gaps = 7/458 (1%)
Query: 43 PDRFTYNILIHGICRIGVVD---EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV 99
P + T NIL+ + R EA +V + G +P+VY +T I+ FC +V E
Sbjct: 237 PSKTTCNILLTSLVRANEFQKCCEAFDVVCK----GVSPDVYLFTTAINAFCKGGKVEEA 292
Query: 100 FRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
++ M+E V PN T +++ G+ C +AF + +ER + + L+
Sbjct: 293 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 352
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
L+ +A +L++M +G+ P ++ + + LN+ I D + +G+
Sbjct: 353 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 412
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
STY L++ K G+ +R L + N S+ VI C M D A
Sbjct: 413 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 472
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
EM R+++P TLISG CK + K EL L GF D T N+++ LC A
Sbjct: 473 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 532
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ ++A E++ G + ++YN LI C + + +M + PD YT++
Sbjct: 533 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 592
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI MNK+E+A + + G+ PD ++YS +I K+ R +E ++ F M
Sbjct: 593 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 652
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
P++ N ++ + GR A ++ + K +GIS
Sbjct: 653 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 690
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 207/445 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ +YN +ID+ +++ S++ A M TYN LI G C+ G D A
Sbjct: 373 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 432
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL+K+M +G+ N ++T +I C+ R + M RN+ P + +L+ G
Sbjct: 433 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 492
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + KA EL +F+ + + N LL+ L EA I +++ RG + +
Sbjct: 493 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 552
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+++ ++ L+E LD +KRG+KP TY +L+ L+ + E ++ +
Sbjct: 553 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 612
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
++ ++ +V +Y+++ID CK + E EM +++ PN V +N LI +C+
Sbjct: 613 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 672
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ EL + G P+ T+ S+I + R E+A EM G+ PN Y
Sbjct: 673 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 732
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI +G + + L ++M + + P+ T+ +I + R + +A + M
Sbjct: 733 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 792
Query: 425 GLRPDNFSYSALIKALIKSGRFDEA 449
G+ PD+ +Y I +K G EA
Sbjct: 793 GIVPDSITYKEFIYGYLKQGGVLEA 817
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 1/181 (0%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G P K T N ++ L RA+ F+ + ++V GV P+ + I + C G V +
Sbjct: 234 GMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEA 292
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
++LF KM+ ++P++ TFN +I + ++A M+ G+ P +YS L+K
Sbjct: 293 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 352
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
L ++ R +A M + G P+ N ++++ ++ G +A +I +G+S
Sbjct: 353 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 412
Query: 500 S 500
S
Sbjct: 413 S 413
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
ALD + G+ P+ T NIL+ SL + + F + +SPD+Y F I
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAIN 281
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+FC+ K+E+A K F M G+ P+ +++ +I L GR+DEA M + G P
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 341
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
T +++++ L + R +A+ ++K ++G
Sbjct: 342 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKG 373
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y A+ID K + ++M P++ TY ++I G R G V EA
Sbjct: 723 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 782
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
RL+ +M G P+ TY I G+ V E F+
Sbjct: 783 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 233/469 (49%), Gaps = 16/469 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I+ + ++P T YN V+ L + + A +M + C P+ T+ I C+ G+
Sbjct: 203 IASMPVAPDTYTYNTVLMGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGL 262
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM--KERNVCPNEATV 118
+D A++L+ +M G P+V Y+ L++GF RV + +L M K +C N A
Sbjct: 263 LDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLNGMLCKPNTICYNAA-- 320
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
+ G+ +L++ + ++ L + + L L N + A +L +M
Sbjct: 321 ---LKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHK 377
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P++ ++ + +++ +L++ P ++ ++ L +A R +
Sbjct: 378 YGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSM---PCSPDVISFNAALKGLCRAERWDD 434
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + ++ ++N++ID C+ ++ A E+ +M P++VT+++LI+
Sbjct: 435 AEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLIN 494
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G + V EL + C KPD F +N+++ LCRA R+EDA + +S M PP
Sbjct: 495 GLSEQGLVESAIELF-QSMPC--KPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPP 551
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N IT+NILI SLC G V R++ +F++M +PDI+T+NALI F +++ A +
Sbjct: 552 NEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRL- 610
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ T+ +PD SY++ +K L ++ R+ EA++ M + C P+ T
Sbjct: 611 --LSTMSCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVT 657
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 219/452 (48%), Gaps = 13/452 (2%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D ++N L+ G CR G + +A RL+ G A NV TYT LI+G+C + R+A+ ++
Sbjct: 145 DPVSHNTLVAGYCRDGRLADAERLLAAAGLSGAA-NVVTYTTLINGYCRSGRLADALALI 203
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
M V P+ T +++ G+ A L+ + ++ T + N
Sbjct: 204 ASMP---VAPDTYTYNTVLMGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQN 260
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
+ A +L +M G P+ + V +++ +L+ + KP Y
Sbjct: 261 GLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLNGML---CKPNTICY 317
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
++ L A R + + + + + + N +++M+ C C+ ++D A E+ +M
Sbjct: 318 NAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHK 377
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
P+ V +NTLI + V +LL + C PD +FN+ + LCRA R++D
Sbjct: 378 YGCRPDAVIYNTLIYSFSEQGRVDDALKLLNS-MPC--SPDVISFNAALKGLCRAERWDD 434
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A + + +M+ P +T+NILI SLC G V ++ +F++M +PDI T+++LI
Sbjct: 435 AEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLIN 494
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+E A + F SM +PD F Y+A++K L ++ R+++A + +M + C P
Sbjct: 495 GLSEQGLVESAIELFQSM---PCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPP 551
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ T N+++ +L Q+G + A ++ + + G
Sbjct: 552 NEITFNILINSLCQKGLVDRAIEVFEQMPKYG 583
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 211/456 (46%), Gaps = 14/456 (3%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
TY LI+G CR G + +AL L+ M AP+ YTY ++ G C A++ + ++ M
Sbjct: 182 TYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEALMAEM 238
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
+ PNE T + + + +A +LL R + ++ +TL+ S
Sbjct: 239 VRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRV 298
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
+A +L M + P + ++ + L + ++ +++ P +T+ +L
Sbjct: 299 DDAIELLNGMLCK---PNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSML 355
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
L + G L + K + YN +I F + +D A ++ M
Sbjct: 356 TSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSM---PC 412
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
+P++++FN + G C+ EL+V +L + TFN +ID LC+ R +A++
Sbjct: 413 SPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIE 472
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
+M ++G P+ +TY+ LI L G V ++ LFQ M PDI+ +NA+++ C
Sbjct: 473 VFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPC---KPDIFGYNAVLKGLC 529
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R + E A + +M P+ +++ LI +L + G D A + F M + G PD +
Sbjct: 530 RAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIF 589
Query: 467 TSNLILETLVQQGRFEEAHDIVKT--SKERGISFKS 500
T N ++ +QGR ++A ++ T K +S+ S
Sbjct: 590 TYNALINGFSEQGRLDDARRLLSTMSCKPDAVSYNS 625
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 137/271 (50%), Gaps = 8/271 (2%)
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
+L++ L R + +R L+ K ++ S+N ++ +C+ + A E
Sbjct: 117 ILIKKLCAQRRLADAERVLD-ALKAAGAADPVSHNTLVAGYCRDGRLADA-ERLLAAAGL 174
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
A N+VT+ TLI+G+C+ + + L ++ PD +T+N+++ LC A ++EDA
Sbjct: 175 SGAANVVTYTTLINGYCRSGRLA---DALALIASMPVAPDTYTYNTVLMGLCGARQWEDA 231
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
++EMV PPN +T+ IR+ C G + R+++L +M +PD+ ++ L+
Sbjct: 232 EALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNG 291
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
F +++ A + ML +P+ Y+A +K L + R+++ Q + M + C P+
Sbjct: 292 FSEQGRVDDAIELLNGMLC---KPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPN 348
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
T +++ L Q G + A ++++ + G
Sbjct: 349 EATFSMLTSCLCQNGLVDCAMEVLEQMHKYG 379
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ NILI+ LCA +A + R+ ++A + D + N L+ +CR ++ AE+ +
Sbjct: 113 VACNILIKKLCAQRRLADAERVLDALKAAGAA-DPVSHNTLVAGYCRDGRLADAERLLAA 171
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
G + +Y+ LI +SGR +A SM PD+YT N +L L +
Sbjct: 172 AGLSGAA-NVVTYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQ 227
Query: 481 FEEAHDIV 488
+E+A ++
Sbjct: 228 WEDAEALM 235
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 218/448 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ N+++ +K N + A++ + +M + K +T+NI+I+ +C+ G + +A
Sbjct: 181 GVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKA 240
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
V ME G PN+ TY ++ G+C++ RV +L MK + + P+ T SL+ G
Sbjct: 241 KDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISG 300
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A ++ +++ ++ NTL+ N A+A +M +G P
Sbjct: 301 MCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPT 360
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
ST++ + L +E ++ ++G+ P TY +L+ + + +
Sbjct: 361 MSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHD 420
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +Y ++ K N M A ++ +++ + P+ + FN LI GHC ++
Sbjct: 421 EMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNS 480
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V ELL + PD+ TFN+++ CR + E+A + EM G+ P+ I++N
Sbjct: 481 NVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFN 540
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI GD+ + R+ +M +P + T+NAL+Q C+ + + AE+ M++
Sbjct: 541 TLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSK 600
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQT 452
G+ PD+ +Y LI+ + K DE K T
Sbjct: 601 GMTPDDTTYFTLIEGIAKVNIPDENKNT 628
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 217/486 (44%), Gaps = 39/486 (8%)
Query: 16 VIDALVKS----NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
V D L+KS N D A+ F M P T N L+ ++ + A L +M
Sbjct: 153 VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
L +VYT+ I+I+ C ++ + + M+ V PN T ++VHG
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGY------ 266
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
C++ A AIL M + P+S T+
Sbjct: 267 ---------------------CSS--------GRVEAADAILTTMKRQKIEPDSFTYGSL 297
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
++ + L E I + +++G++P Y L++ G Y + + K +
Sbjct: 298 ISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI 357
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+++YN +I D A + +E++++ I+P+ +T+N LI+G+C+ A K
Sbjct: 358 SPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFL 417
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
L +L G KP K T+ S++ L + +R ++A D ++ GV P+ I +N LI C
Sbjct: 418 LHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHC 477
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
+ +V + L + M ++ PD TFN ++Q CR K+E+A + F M G++PD+
Sbjct: 478 SNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHI 537
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
S++ LI + G +A + M G NP T N +++ L + + A +++K
Sbjct: 538 SFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEM 597
Query: 492 KERGIS 497
+G++
Sbjct: 598 VSKGMT 603
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%)
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
RDR + + F+ LI C + E + E G P T NS++ + +R
Sbjct: 143 RDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRT 202
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
E A +EM + + T+NI+I LC G + ++ M+ + P+I T+N +
Sbjct: 203 EAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTI 262
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
+ +C ++E A+ +M + PD+F+Y +LI + K GR +EA + F M Q G
Sbjct: 263 VHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGL 322
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
P + N +++ +G + A ++GIS
Sbjct: 323 RPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGIS 358
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
++I ++ LI+S C + + F M+ + P I T N+L+ F ++N+ E A +
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M L ++ ++++ +I L K G+ +AK ME +G P+ T N I+
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269
Query: 479 GRFEEAHDIVKTSKERGISFKSF 501
GR E A I+ T K + I SF
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSF 292
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 230/509 (45%), Gaps = 54/509 (10%)
Query: 7 SPSTRLYNAVIDALVKSNSID--LAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
SPS +N ++ +LVKSN+ + +A + ++ ++ P T+N +I+ C +G +D A
Sbjct: 43 SPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFA 102
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ ++ +GY P+ T T LI G C +V E + + R NE + L++G
Sbjct: 103 FSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILING 162
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + A ++L + + T ++ +T++ L + +EA + +M + P+
Sbjct: 163 LCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPD 222
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL- 243
TF + E G+ + + P T+ +L++AL K G E L
Sbjct: 223 VVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLA 282
Query: 244 ------------NHVF----KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
HVF K R+ +V+SY ++I CK+ M+D A + EMR
Sbjct: 283 VMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMR----- 337
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
CK G PDK T++S+ID LC++ R A +
Sbjct: 338 -------------CK-----------------GITPDKVTYSSLIDGLCKSERISHAWEL 367
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
L +M G P + ITY + +LC V +++ L +K++ I P+I T+N LI C+
Sbjct: 368 LDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCK 427
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ E A+ F +L G + ++Y+ +I L G FDEA ME NGC PD T
Sbjct: 428 EGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVT 487
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERGI 496
I+ L + +A +++ RG+
Sbjct: 488 YETIIRALFKNDENHKAEKLLREMIARGL 516
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 175/388 (45%), Gaps = 19/388 (4%)
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRL--SNNSMASEAAAILRKMGDRGYLPESS 186
+D H A R + P + N +L L SNN+ A ++ ++ P
Sbjct: 25 VDVHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIV 84
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
TF+ + C +++ +L +K G P T L++ L G+ E + +HV
Sbjct: 85 TFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHV 144
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
N SY ++I+ CK+ A ++ R++ + + N+V ++T+I CK+ V
Sbjct: 145 IARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLV 204
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ EL ++ PD TF+++I C +F++A EMV + P+ T+NIL
Sbjct: 205 TEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNIL 264
Query: 367 IRSLCAIG-----------------DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
+ +LC G V ++ +F + R++PD++++ +I+ C++
Sbjct: 265 VDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIK 324
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
+++A F M G+ PD +YS+LI L KS R A + M G D T
Sbjct: 325 MVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYT 384
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGIS 497
L L + + ++A +VK K++GI
Sbjct: 385 SFLHALCKNHQVDKAVALVKKIKDQGIQ 412
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 155/353 (43%), Gaps = 22/353 (6%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++ + +Y+ +ID+L K + AY + QM V + PD T++ LI+G C +G EA
Sbjct: 184 VNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAF 243
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEI-MKERNVCPNEATVRSLVHG 124
L +M P+V T+ IL+D C E VL + MKE N V +++ G
Sbjct: 244 GLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNII-G 302
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R ++ ++I+ RL M EA ++ +M +G P+
Sbjct: 303 KRRVTPDVHSYTIIIK------------------RLCKIKMVDEALSLFNEMRCKGITPD 344
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L ++ +LD RG TY + AL K V+ L
Sbjct: 345 KVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCK-NHQVDKAVALV 403
Query: 245 HVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
KD+ + N+N+YN++ID CK + A I +++ + + T+N +I+G C +
Sbjct: 404 KKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLE 463
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ LL + + G PD T+ ++I L + A L EM+ G+
Sbjct: 464 GLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGL 516
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 6/183 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P Y+++ID L KS I A+ QM D TY +H +C+ VD+A
Sbjct: 340 GITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKA 399
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ LVK+++ G PN+ TY ILIDG C R + + + + T +++G
Sbjct: 400 VALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMING 459
Query: 125 VFRCLDP--HKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ CL+ +A LL + ME T +V T++ L N +A +LR+M RG
Sbjct: 460 L--CLEGLFDEAMTLLEK-MEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGL 516
Query: 182 LPE 184
L E
Sbjct: 517 LEE 519
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 74/139 (53%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y + + AL K++ +D A +++ +P+ TYNILI G+C+ G + A + + +
Sbjct: 383 YTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLL 442
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
GY V+TY I+I+G C E +LE M++ P+ T +++ +F+ + H
Sbjct: 443 IKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENH 502
Query: 133 KAFELLIRFMEREPLTQKL 151
KA +LL + R L +K+
Sbjct: 503 KAEKLLREMIARGLLEEKV 521
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ YN +ID L K + A + FQ + + K +TYNI+I+G+C G+ DEA
Sbjct: 410 GIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEA 469
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+ L+++ME G P+V TY +I + ++L M R + + +R
Sbjct: 470 MTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEEKVEIR 524
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 224/460 (48%), Gaps = 19/460 (4%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQM--EGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
PD F+YNIL++G+C EAL L+ M +G P+V +Y+ +I+GF
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGD----- 103
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
L+ M ++ + PN T S++ + + KA E+L ++ + + N++++
Sbjct: 104 --LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 161
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
++ EA L+KM G P+ T++ + L E I D+ KRG+KP
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDI 221
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
+TY L++ G VE L+ + ++ + N +++++ + K ++ A + +
Sbjct: 222 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 281
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
MR + + PN VT+ T+I CK V +++ G +PD +NS+I LC +
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
+E A + EM++ G+ +TI +N +I S C G V S +LF M + PDI T
Sbjct: 342 WEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT--- 398
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
+ + ++A+ F + + GL P+ ++Y + + +I G +E Q FLSME NG
Sbjct: 399 -------LGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 451
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
C DS N I+ L+Q+G A + E+ S ++
Sbjct: 452 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEA 491
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/479 (23%), Positives = 207/479 (43%), Gaps = 55/479 (11%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P Y+ VI+ K +D +M + P+ TYN +I +C+ VD+A+ +
Sbjct: 86 PDVVSYSTVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEV 138
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ M G P+ TY ++ GFC++ + E L+ M+ V P+ T
Sbjct: 139 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTY--------- 189
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
N+L+ L N +EA I M RG P+ +T
Sbjct: 190 --------------------------NSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITT 223
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + T L E G+LD ++ G+ P + +L+ A K + E + +
Sbjct: 224 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 283
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ L N +Y VID CK ++ A +M D + P+ + +N+LI C +
Sbjct: 284 QQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWE 343
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
K EL + +L+ G FNS+ID C+ R ++ MV GV P+ IT
Sbjct: 344 KAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT----- 398
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+G + LF ++ + P+ +T+ + ++ +E+ ++ F SM G
Sbjct: 399 -----LGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCT 453
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSM-EQNGCNPDSYTSNLILETLVQQGRFEEAH 485
D+ + +++ L++ G A T+LSM ++ + ++ T++L ++ L+ G+++E H
Sbjct: 454 VDSGMLNFIVRELLQRGEITRAG-TYLSMIDEKHFSLEASTASLFID-LLSGGKYQEYH 510
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 183/443 (41%), Gaps = 46/443 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP+ YN++I AL K+ ++D A M PD TYN ++HG C G EA+
Sbjct: 112 ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAI 171
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+K+M G P+V TY L+D C R E ++ + M +R + P+ T +L+ G
Sbjct: 172 VFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQG- 230
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ E +L M G P
Sbjct: 231 ----------------------------------YATKGALVEMHGLLDLMVRNGIHPNH 256
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
F V + E + ++G+ P TY +++ L K+GR + Y
Sbjct: 257 YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQ 316
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + L + YN +I C + ++A E+ EM DR I + + FN++I HCK+
Sbjct: 317 MIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGR 376
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V ++ +L +++ G KPD T R ++A D G+ PN TY +
Sbjct: 377 VIESGKLFDLMVRIGVKPDIITLG----------RNDEAKDLFVAFSSNGLVPNYWTYRL 426
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+ ++ G + +LF M+ + + D N +++ + +I +A + SM+
Sbjct: 427 MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA-GTYLSMIDEK 485
Query: 426 LRPDNFSYSALIKALIKSGRFDE 448
S ++L L+ G++ E
Sbjct: 486 HFSLEASTASLFIDLLSGGKYQE 508
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 93/229 (40%), Gaps = 36/229 (15%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ Y VID L KS ++ A L F+QM + +PD YN LIH +C ++A
Sbjct: 286 GLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKA 345
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +M G + + +ID C RV E ++ ++M V P+ T+
Sbjct: 346 EELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGR---- 401
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS-----NNSMASEAAAILRKMGDR 179
+A +L + F + LV N YRL + E + M D
Sbjct: 402 ------NDEAKDLFVAFS-----SNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 450
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
G +S ++ I+ ++RG R TYL +++
Sbjct: 451 GCTVDSGMLNF----------------IVRELLQRGEITRAGTYLSMID 483
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 130/527 (24%), Positives = 235/527 (44%), Gaps = 39/527 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ +N + L ++ DL +QM + D +T NI+I+ CR + A
Sbjct: 88 PTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSA 147
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ LGY PN T+ L++G C RV E +++ M P+ T+ ++V+G+
Sbjct: 148 MGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGL-- 205
Query: 128 CLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
CL +A +L+ R M + +L R+ + + A +LRKM R P
Sbjct: 206 CLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHV 265
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + L L++ +G+K TY L+ + GR +G + L
Sbjct: 266 VTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRD 325
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++ NV +++ +ID K + A ++ EM R I PN +T+N+LI G C D
Sbjct: 326 MITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKR 385
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL-------------------- 345
+ + +++ +++ G PD +T+N +I+ C+A + +D +
Sbjct: 386 LDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYST 445
Query: 346 ---------------DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
EMV GV P +TY IL+ LC G++ +L + +M +
Sbjct: 446 LIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCK 505
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ DI +N +I C NK++ A F S+ + G++ D SY+ ++ L K EA
Sbjct: 506 MELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEAD 565
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
F M+++G PD T N ++ ++ + +++ K G S
Sbjct: 566 ALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFS 612
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 235/492 (47%), Gaps = 9/492 (1%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
S RL + ++D + K +++ L FQ M + P +N L + R D L
Sbjct: 57 SYKERLRSGLVD-IKKDDAVAL----FQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLA 111
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L KQME G A ++YT I+I+ FC +++ F + + + PN T +L++G+
Sbjct: 112 LCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGL- 170
Query: 127 RCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
CL+ +A EL+ + + + + NT++ L SEA ++ +M G P
Sbjct: 171 -CLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPN 229
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + + + +L R +KP TY ++++ L K GR + + +
Sbjct: 230 QFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFS 289
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +NV +YN +I FC D ++ R+M R I PN+VTF+ LI K+
Sbjct: 290 EMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEG 349
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + ++L ++ G +P+ T+NS+I LC R ++A + MV G P+ TYN
Sbjct: 350 KLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYN 409
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
ILI C V +RLF+KM + D T++ LIQ FC+ K+ A+K F M++
Sbjct: 410 ILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQ 469
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ P +Y+ L+ L +G +EA M + D N+I+ + + ++A
Sbjct: 470 GVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDA 529
Query: 485 HDIVKTSKERGI 496
+ + +G+
Sbjct: 530 WSLFCSLPSKGV 541
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/477 (25%), Positives = 222/477 (46%), Gaps = 10/477 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P+T +N +++ L + A M + Q PD T N +++G+C V E
Sbjct: 154 LGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSE 213
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+ +M G PN +TY +++ C + A +L M+ R + P+ T ++
Sbjct: 214 AVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIID 273
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS-----EAAAILRKMGD 178
+ C D + + L F E E T+ + N Y S S + A +LR M
Sbjct: 274 NL--CKDG-RLDDALSFFSEME--TKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMIT 328
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
R P TF + LV L E + + I RG++P TY L+ L R E
Sbjct: 329 RKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDE 388
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
++ ++ + ++ +YN++I+ FCK +D + R+M R + + VT++TLI
Sbjct: 389 ANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQ 448
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G C+ ++ +++ ++ G P T+ ++D LC E+AL L +M + +
Sbjct: 449 GFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMEL 508
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ YNI+I +C V + LF + + + DI ++N ++ C+ + + +A+ F
Sbjct: 509 DIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALF 568
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
M G PD +Y+ LI+A ++ + Q M++ G + D+ T ++++ L
Sbjct: 569 RKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDML 625
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 157/344 (45%), Gaps = 35/344 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P+ ++A+ID+LVK + A + +M +P+ TYN LI+G+C +DEA
Sbjct: 331 ITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEAN 390
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+++ M G P+++TY ILI+GFC AK+V + R+ M R + + T +L+ G
Sbjct: 391 QMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGF 450
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ ++KL+ A + ++M +G P
Sbjct: 451 CQ--------------------SRKLIV---------------AKKVFQEMVSQGVHPGI 475
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + L +L E GILD K ++ Y +++ + A + +
Sbjct: 476 MTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCS 535
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + ++ SYN+++ CK + + A + R+M++ P+ T+NTLI H + +
Sbjct: 536 LPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGND 595
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+ + +L+ + CGF D T ++D L + L+ LS
Sbjct: 596 ITTSVQLIEEMKRCGFSSDASTVKIVMDMLSSGELDKSFLNMLS 639
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 100/230 (43%)
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
D A + + M P ++ FN L + + L + G D +T N M
Sbjct: 72 DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
I+C CR + A + ++ + G PNT+T+N L+ LC G V ++ L M +
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
PD+ T N ++ C +++ +A M+ G +P+ F+Y ++ + KSG A
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALD 251
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
ME P T +I++ L + GR ++A + +GI F
Sbjct: 252 LLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVF 301
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 121/281 (43%), Gaps = 35/281 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+T YN++I L +D A M C PD +TYNILI+G C+ VD+
Sbjct: 365 GIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDG 424
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+RL ++M G + TY+ LI GFC ++++ +V + M + V P T L+ G
Sbjct: 425 MRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDG 484
Query: 125 V---------FRCLDP-HKA--------FELLIRFM---EREPLTQKLVC---------- 153
+ LD HK + ++I M + L C
Sbjct: 485 LCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRD 544
Query: 154 ----NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
N +L L S SEA A+ RKM + GY P+ T++ + + G D+ + +++
Sbjct: 545 IQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIE 604
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ G ST ++M+ L D L+ F D+
Sbjct: 605 EMKRCGFSSDASTVKIVMDMLSSGELDKSFLNMLSGPFGDK 645
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 229/527 (43%), Gaps = 35/527 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP L+ I+A K ++ A F +M P+ T+N +I G+ G DEA
Sbjct: 244 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 303
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++M G P + TY+IL+ G AKR+ + + VL+ M ++ PN +L+
Sbjct: 304 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 363
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+KA E+ + + NTL+ N A A +L++M G+
Sbjct: 364 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 423
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+F + L + L + + + R + P L+ L K G+ +
Sbjct: 424 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 483
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
V + + N ++ C+ +D A I +E+ R + V++NTLISG C
Sbjct: 484 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 543
Query: 305 EV--------------------------------HKTRELLVMLLEC---GFKPDKFTFN 329
++ +K E + +C G PD +T++
Sbjct: 544 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 603
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
MID C+A R E+ + EM+ V PNT+ YN LIR+ C G ++ +L L + M+
Sbjct: 604 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 663
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
ISP+ T+ +LI+ ++++E+A+ F M GL P+ F Y+ALI K G+ +
Sbjct: 664 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 723
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ M +P+ T +++ + G EA ++ +E+GI
Sbjct: 724 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 770
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 208/458 (45%), Gaps = 7/458 (1%)
Query: 43 PDRFTYNILIHGICRIGVVD---EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV 99
P + T NIL+ + R EA +V + G +P+VY +T I+ FC +V E
Sbjct: 213 PSKTTCNILLTSLVRANEFQKCCEAFDVVCK----GVSPDVYLFTTAINAFCKGGKVEEA 268
Query: 100 FRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
++ M+E V PN T +++ G+ C +AF + +ER + + L+
Sbjct: 269 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 328
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
L+ +A +L++M +G+ P ++ + + LN+ I D + +G+
Sbjct: 329 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 388
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
STY L++ K G+ +R L + N S+ VI C M D A
Sbjct: 389 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 448
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
EM R+++P TLISG CK + K EL L GF D T N+++ LC A
Sbjct: 449 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 508
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ ++A E++ G + ++YN LI C + + +M + PD YT++
Sbjct: 509 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 568
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI MNK+E+A + + G+ PD ++YS +I K+ R +E ++ F M
Sbjct: 569 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 628
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
P++ N ++ + GR A ++ + K +GIS
Sbjct: 629 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 666
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 207/445 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ +YN +ID+ +++ S++ A M TYN LI G C+ G D A
Sbjct: 349 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 408
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL+K+M +G+ N ++T +I C+ R + M RN+ P + +L+ G
Sbjct: 409 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 468
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + KA EL +F+ + + N LL+ L EA I +++ RG + +
Sbjct: 469 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 528
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+++ ++ L+E LD +KRG+KP TY +L+ L+ + E ++ +
Sbjct: 529 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 588
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
++ ++ +V +Y+++ID CK + E EM +++ PN V +N LI +C+
Sbjct: 589 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 648
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ EL + G P+ T+ S+I + R E+A EM G+ PN Y
Sbjct: 649 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 708
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI +G + + L ++M + + P+ T+ +I + R + +A + M
Sbjct: 709 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 768
Query: 425 GLRPDNFSYSALIKALIKSGRFDEA 449
G+ PD+ +Y I +K G EA
Sbjct: 769 GIVPDSITYKEFIYGYLKQGGVLEA 793
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 1/181 (0%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G P K T N ++ L RA+ F+ + ++V GV P+ + I + C G V +
Sbjct: 210 GMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEA 268
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
++LF KM+ ++P++ TFN +I + ++A M+ G+ P +YS L+K
Sbjct: 269 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 328
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
L ++ R +A M + G P+ N ++++ ++ G +A +I +G+S
Sbjct: 329 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 388
Query: 500 S 500
S
Sbjct: 389 S 389
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
ALD + G+ P+ T NIL+ SL + + F + +SPD+Y F I
Sbjct: 199 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAIN 257
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+FC+ K+E+A K F M G+ P+ +++ +I L GR+DEA M + G P
Sbjct: 258 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 317
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
T +++++ L + R +A+ ++K ++G
Sbjct: 318 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKG 349
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y A+ID K + ++M P++ TY ++I G R G V EA
Sbjct: 699 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 758
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
RL+ +M G P+ TY I G+ V E F+
Sbjct: 759 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 795
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 228/527 (43%), Gaps = 45/527 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP T Y + + S +D AY ++M C+P+ Y LI + +A+
Sbjct: 418 ISPYT--YGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAV 475
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
R++K+M G AP+ + Y LI G AK++ E L M E P+ T + + G
Sbjct: 476 RVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGY 535
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ A + + +E + K++C L+ EA + R M ++G L ++
Sbjct: 536 IEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDA 595
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + LV +N+ I +G+ P +Y L++ K G + +
Sbjct: 596 KTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDE 655
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + L SNV YNM++ FC+ +++A E+ EM + PN VT+ T+I G+CK +
Sbjct: 656 MVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGD 715
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL--------DCLSE------M 351
+ + +L + G PD F + +++D CR + E A+ C S +
Sbjct: 716 LAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNAL 775
Query: 352 VEWGV------------------------PPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+ W PN +TYNI+I LC G++ + LF MQ
Sbjct: 776 INWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQ 835
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ P + T+ +L+ + +M + + F ++ G+ PDN YS +I A +K G
Sbjct: 836 KANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTT 895
Query: 448 EA----KQTFL-SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+A Q F + +GC T +L + G E A +V+
Sbjct: 896 KALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVE 942
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/505 (24%), Positives = 218/505 (43%), Gaps = 21/505 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G++P R Y ++I+ + ++ Y ++ +TY + G+C G +D
Sbjct: 379 FGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDG 438
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +VK+M G PNV YT LI F R + RVL+ M+E+ + P+ SL+
Sbjct: 439 AYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLII 498
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +A L+ +E + + A +++M + G +P
Sbjct: 499 GLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIP 558
Query: 184 ESSTFDYTVTCLVTGL--------DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
L TGL + E C + +++G+ TY +LM L K G+
Sbjct: 559 NK--------VLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGK 610
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
+ + + + + +V SY +ID F K+ M +A+ I EM + N++ +N
Sbjct: 611 VNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNM 670
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
L+ G C+ E+ K +ELL + GF P+ T+ ++ID C++ +A EM G
Sbjct: 671 LLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKG 730
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ P++ Y L+ C + DV R++ +F+ + S FNALI + K E
Sbjct: 731 LVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSA-PFNALINWVFKFGKTELTT 789
Query: 416 KAFFSMLTLGL----RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
++ +P++ +Y+ +I L K G + AK+ F M++ P T +
Sbjct: 790 DMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSL 849
Query: 472 LETLVQQGRFEEAHDIVKTSKERGI 496
L + GR E + GI
Sbjct: 850 LNGYDKMGRRSEMFSVFDEVIAAGI 874
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/515 (24%), Positives = 215/515 (41%), Gaps = 56/515 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV-- 61
L + PS N ++DAL+K N +DL + ++ M D +Y +LI CR G V
Sbjct: 183 LDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQL 242
Query: 62 -------------------DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
DEAL L K M G P+ +Y +LIDG C KR+ + +
Sbjct: 243 AKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSL 302
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
L M + + L+ G+ + +
Sbjct: 303 LVEMNSVGLFADNVAYSILIDGLLKGRN-------------------------------- 330
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
A A ++ +M G+ + +DY + + + + + D I GV P
Sbjct: 331 ---ADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARA 387
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y L+E ++ +G L + K +V + +Y + C +D A I +EM
Sbjct: 388 YASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMG 447
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
PN+V + TLI + + +L + E G PD F +NS+I L +A + +
Sbjct: 448 ASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMD 507
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+A L EMVE G P+ TY I G+ A + + ++M + P+ LI
Sbjct: 508 EARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLI 567
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+C+ K+ +A AF SM+ G+ D +Y+ L+ L+K+G+ ++A++ F M G
Sbjct: 568 NEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIA 627
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
PD ++ +++ + G ++A I + G++
Sbjct: 628 PDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLT 662
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/500 (24%), Positives = 221/500 (44%), Gaps = 5/500 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS + YN +ID L K ++ A +M+ D Y+ILI G+ + D A
Sbjct: 275 GLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAA 334
Query: 65 LRLVKQMEGLGYA--PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
LV +M G++ P +Y Y I + A A+ + + M V P SL+
Sbjct: 335 NGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKA--LFDGMITFGVTPGARAYASLI 392
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G FR + K +ELL+ +R + T + + ++ A I+++MG G
Sbjct: 393 EGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCR 452
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P + + + + +L ++G+ P Y L+ L KA + E +
Sbjct: 453 PNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSF 512
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + ++ + +Y I + + A + +EM + + PN V LI+ +CK
Sbjct: 513 LLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCK 572
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+V + ++E G D T+ +++ L + + DA + EM G+ P+ +
Sbjct: 573 KGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFS 632
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y LI +G++ ++ +F +M ++ ++ +N L+ FCR +IEKA++ M
Sbjct: 633 YGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMS 692
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G P+ +Y +I KSG EA Q F M+ G PDS+ +++ + E
Sbjct: 693 GKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 752
Query: 483 EAHDIVKTSKERGISFKSFP 502
A I +T+ E+G + S P
Sbjct: 753 RAITIFETN-EKGCASSSAP 771
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/477 (22%), Positives = 195/477 (40%), Gaps = 45/477 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P T YN++I L K+ +D A +M + KPD FTY I G G A
Sbjct: 485 GIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASA 544
Query: 65 LRLVKQMEGLGYAPN-----------------------------------VYTYTILIDG 89
+ VK+M G PN TYT+L++G
Sbjct: 545 DKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNG 604
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
+V + + M+ + + P+ + +L+ G + + KA + ++ +
Sbjct: 605 LVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSN 664
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
++ N LL + +A +L +M +G+ P + T+ + DL E + D
Sbjct: 665 VIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFD 724
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+G+ P Y L++ + DVE + + S+ +N +I+ K
Sbjct: 725 EMKLKGLVPDSFVYTTLVDGCCRL-NDVERAITIFETNEKGCASSSAPFNALINWVFKFG 783
Query: 270 MMDRATEICREMRDRDI----APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
+ T++ + D PN VT+N +I CK+ + +EL + + P
Sbjct: 784 KTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTV 843
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T+ S+++ + R + E++ G+ P+ I Y+++I + G ++L L +
Sbjct: 844 ITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQ 903
Query: 386 MQADRISPD-----IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
M A D I T AL+ F ++ ++E AEK +M+ L PD+ + LI
Sbjct: 904 MFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELI 960
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 173/393 (44%), Gaps = 38/393 (9%)
Query: 132 HKAFELLIRFMERE-PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
KA ++IR +ER+ P+ + V ++++ L S+ +L + GY+ E D
Sbjct: 114 EKAHSVVIRMIERKWPVAE--VWSSIVRCLREFVGKSDDRVLLFGILIDGYI-EKGFLDE 170
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-DVEGDRYLNHVFKD 249
V + DL+ LD + P + L++AL K R D+ D Y V ++
Sbjct: 171 AVFVFSSTKDLD-----LD------LVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERN 219
Query: 250 RLVSNVNSYNMVIDCFCK---VNM------------------MDRATEICREMRDRDIAP 288
+V +V SY M+I C+ V + +D A E+ + M + + P
Sbjct: 220 -VVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVP 278
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+ ++N LI G CK + + LLV + G D ++ +ID L + + A +
Sbjct: 279 SRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLV 338
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
EMV G + + Y+ I + G + ++ LF M ++P + +LI+ F R
Sbjct: 339 HEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFRE 398
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+ K + + + ++Y +K + SG D A M +GC P+
Sbjct: 399 KNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIY 458
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+++T +Q+ RF +A ++K +E+GI+ +F
Sbjct: 459 TTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTF 491
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 145/341 (42%), Gaps = 10/341 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P Y +ID K ++ A F +M + YN+L+ G CR G +++A
Sbjct: 625 GIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKA 684
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M G G+ PN TY +IDG+C + +AE F++ + MK + + P+ +LV G
Sbjct: 685 KELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDG 744
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY--- 181
R D +A + E+ + N L+ + ++ ++ D +
Sbjct: 745 CCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKF 803
Query: 182 -LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P T++ + L +L + K + P TY L+ K GR E
Sbjct: 804 GKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMF 863
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN-----LVTFNT 295
+ V + + Y+++I+ F K M +A + +M ++ + + T
Sbjct: 864 SVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRA 923
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
L+SG K E+ +++ ++ + PD T +I+ C
Sbjct: 924 LLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESC 964
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 132/507 (26%), Positives = 237/507 (46%), Gaps = 22/507 (4%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + ++ +V+ +D+ ++M + + + +++ IL+ C + AL
Sbjct: 76 PSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALST 135
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ LG+ P V T++ L+ G C R++E + M + PN T +L++G+ R
Sbjct: 136 FGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCR 191
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL-PESS 186
+A LL R +E ++ T++ + A +LRKM + ++ P
Sbjct: 192 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVV 251
Query: 187 TFDYT-VTCLVTGL----DLNETCGILDTFIKR-GVKPRFSTYLLLMEALYKAGRDVEGD 240
+ TC++ G +E +L ++R + P TY L+ A K G+ E +
Sbjct: 252 IWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAE 311
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + ++ + +Y+ +ID FCK N +D A + M + +P+++TFNTLI+G+
Sbjct: 312 ELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGY 371
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ V +LL + E G + T+ ++I C+ A D L EMV GV PN
Sbjct: 372 CRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNV 431
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADR-----------ISPDIYTFNALIQSFCRMN 409
+T N L+ LC G + +L +F+ MQ + + PD+ T+N LI
Sbjct: 432 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEG 491
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
K +AE+ + M G+ PD +Y+++I L K R DEA Q F SM +P+ T
Sbjct: 492 KFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFT 551
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGI 496
++ + GR ++ ++ RGI
Sbjct: 552 TLINGYCKAGRVDDGLELFCEMGRRGI 578
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 229/502 (45%), Gaps = 22/502 (4%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I+ LG P+ ++ ++ L + I A F QM CKP+ T+ L++G+CR G
Sbjct: 139 ITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGR 194
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE-RNVCPNEATV- 118
V EA+ L+ +M G PN TY ++DG C +L M+E ++ PN
Sbjct: 195 VVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWP 254
Query: 119 ----RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAIL 173
+++G +A +LL +ER+ ++ +V N L+ EA +
Sbjct: 255 LERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELY 314
Query: 174 RKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
+M RG +P + T+ + L+ + +G P T+ L+ +A
Sbjct: 315 DEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRA 374
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
R +G + L+ + + LV+N +Y +I FC+V ++ A ++ +EM + PN+VT
Sbjct: 375 KRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTC 434
Query: 294 NTLISGHCKDAEVHKTRELLVMLLEC-----------GFKPDKFTFNSMIDCLCRAHRFE 342
NTL+ G C + ++ E+ + + G +PD T+N +I L +F
Sbjct: 435 NTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFL 494
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+A + EM G+ P+TITYN +I LC + + ++F M + SP++ TF LI
Sbjct: 495 EAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 554
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+C+ +++ + F M G+ + +Y LI K G + A F M +G
Sbjct: 555 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVY 614
Query: 463 PDSYTSNLILETLVQQGRFEEA 484
PD+ T +L L + + A
Sbjct: 615 PDTITIRNMLTGLWSKEELKRA 636
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 228/473 (48%), Gaps = 24/473 (5%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P T++ L+HG+C + EAL L QM PNV T+T L++G C RV E +
Sbjct: 146 PTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVAL 201
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR--- 159
L+ M E + PN+ T ++V G+ + D A LL + E + +V L R
Sbjct: 202 LDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCM 261
Query: 160 ---LSNNSMASEAAAILRKMGDRGYL-PESSTFDYTVTCLVTGLDLNETCGILDTFIKRG 215
++ SEA +L++M +R + P+ T++ + V E + D + RG
Sbjct: 262 INGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 321
Query: 216 VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRA 274
+ P TY +++ K R ++ ++ ++ + S ++ ++N +I +C+ +D
Sbjct: 322 IIPSTITYSSMIDGFCKQNR-LDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDG 380
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
++ EM + + N +T+ TLI G C+ +++ ++LL ++ G P+ T N+++D
Sbjct: 381 IKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDG 440
Query: 335 LCRAHRFEDALDCLSEMVEW-----------GVPPNTITYNILIRSLCAIGDVARSLRLF 383
LC + +DAL+ M + GV P+ TYNILI L G + L+
Sbjct: 441 LCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 500
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
++M I PD T+N++I C+ +++++A + F SM + P+ +++ LI K+
Sbjct: 501 EEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 560
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
GR D+ + F M + G ++ T ++ + G A DI + G+
Sbjct: 561 GRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGV 613
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 133/497 (26%), Positives = 229/497 (46%), Gaps = 36/497 (7%)
Query: 24 NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTY 83
++IDL F M + P + L+ + R+G +D + L ++ME N Y++
Sbjct: 61 DAIDL----FGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSF 116
Query: 84 TILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH--KAFELLIRF 141
TIL+ FC+ ++ + + P T +L+HG+ C++ +A +L +
Sbjct: 117 TILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGL--CVEDRISEALDLFHQM 174
Query: 142 MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
+ +T TL+ L EA A+L +M + G P T+ V + +
Sbjct: 175 CKPNVVT----FTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMC---KM 227
Query: 202 NETCGILDTFIK----RGVKPRFSTYLL-----LMEALYKAGRDVEGDRYLNHVFKDRLV 252
+T L+ K +KP + L ++ +GR E + L + + + +
Sbjct: 228 GDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKI 287
Query: 253 S-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
S +V +YN +I+ F K A E+ EM R I P+ +T++++I G CK +
Sbjct: 288 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEH 347
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
+ ++ G PD TFN++I CRA R +D + L EM E G+ NTITY LI C
Sbjct: 348 MFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFC 407
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL------- 424
+GD+ + L Q+M + + P++ T N L+ C K++ A + F +M
Sbjct: 408 QVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDAS 467
Query: 425 ----GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
G+ PD +Y+ LI LI G+F EA++ + M G PD+ T N ++ L +Q R
Sbjct: 468 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSR 527
Query: 481 FEEAHDIVKTSKERGIS 497
+EA + + + S
Sbjct: 528 LDEATQMFDSMGSKSFS 544
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 175/382 (45%), Gaps = 24/382 (6%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP YNA+I+A VK A + +M P TY+ +I G C+ +D A
Sbjct: 287 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAE 346
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M G +P++ T+ LI G+C AKRV + ++L M E + N T +L+HG
Sbjct: 347 HMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGF 406
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ D + A +LL + + CNTLL L +N +A + + M +
Sbjct: 407 CQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM-------QK 459
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
S D I + GV+P TY +L+ L G+ +E +
Sbjct: 460 SKMD-----------------IDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 502
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ +V + +YN VI CK + +D AT++ M + +PN+VTF TLI+G+CK
Sbjct: 503 MPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 562
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V EL + G + T+ ++I + ALD EM+ GV P+TIT
Sbjct: 563 VDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRN 622
Query: 366 LIRSLCAIGDVARSLRLFQKMQ 387
++ L + ++ R++ + + +Q
Sbjct: 623 MLTGLWSKEELKRAVAMLEDLQ 644
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 149/322 (46%), Gaps = 15/322 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI PST Y+++ID K N +D A F M+ C PD T+N LI G CR VD+
Sbjct: 321 GIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDG 380
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+ +M G N TYT LI GFC + +L+ M VCPN T +L+ G
Sbjct: 381 IKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDG 440
Query: 125 V---FRCLDPHKAFELLIR----------FMEREPLTQKLVCNTLLYRLSNNSMASEAAA 171
+ + D + F+ + + F EP Q N L+ L N EA
Sbjct: 441 LCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTY--NILISGLINEGKFLEAEE 498
Query: 172 ILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY 231
+ +M RG +P++ T++ + L L+E + D+ + P T+ L+
Sbjct: 499 LYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 558
Query: 232 KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
KAGR +G + + +V+N +Y +I F KV ++ A +I +EM + P+ +
Sbjct: 559 KAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTI 618
Query: 292 TFNTLISGHCKDAEVHKTRELL 313
T +++G E+ + +L
Sbjct: 619 TIRNMLTGLWSKEELKRAVAML 640
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G+ P + YN +I L+ A +++M PD TYN +IHG+C+ +D
Sbjct: 470 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLD 529
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA ++ M ++PNV T+T LI+G+C A RV + + M R + N T +L+
Sbjct: 530 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 589
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
HG + + + A ++ M + +L L + A A+L +
Sbjct: 590 HGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDL 643
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 4/156 (2%)
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
EDA+D +MV P+ I + L+ + +G + + L +KM+ R+ + Y+F
Sbjct: 59 LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
L++ FC +K+ A F + LG P ++S L+ L R EA F M
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM---- 174
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
C P+ T ++ L ++GR EA ++ E G+
Sbjct: 175 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGL 210
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 223/493 (45%), Gaps = 1/493 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P+ +YNA+I+AL K +D A L ++ M + TY+ILI C+ G++D
Sbjct: 352 FGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDV 411
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +M G +Y Y LI+G C ++ + M + P T +L+
Sbjct: 412 AESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLIS 471
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + L KAF+L E+E L+Y L + + +EA+ + +M +R P
Sbjct: 472 GYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKP 531
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + ++++ +L+ + G+ P TY L+ L GR ++
Sbjct: 532 TEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFI 591
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K L N Y+ ++ +C + A EM R I +LV LI G K
Sbjct: 592 DDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQ 651
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + LL + + G +PD + SMID + F+ + +CL MV PN +TY
Sbjct: 652 QDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTY 711
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+ LC +G++ R+ LF+KM ISP+ T+ + S + +++A ML
Sbjct: 712 TAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK 771
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL + +Y+ LI+ K GR EA + M +NG PD T + I+ + G
Sbjct: 772 -GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGA 830
Query: 484 AHDIVKTSKERGI 496
A ++ T +G+
Sbjct: 831 AVELWDTMLRKGV 843
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 214/492 (43%), Gaps = 35/492 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P +AVI +L + A K M ++ TYN+LIHG+C+ G V EA
Sbjct: 213 GVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEA 272
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + K + G +V TY L+ GFC ++ + ++ M E P EA V LV G
Sbjct: 273 LEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDG 332
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + A++L++ K+G G+LP
Sbjct: 333 LRKKGNIDSAYDLVV-----------------------------------KLGRFGFLPN 357
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + L G DL++ + + TY +L+++ K G + Y
Sbjct: 358 LFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFG 417
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +D + + YN +I+ CK + A + +M + + P TF TLISG+CKD
Sbjct: 418 RMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDL 477
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V K +L + E P +TF ++I LC + +A EMVE + P +TYN
Sbjct: 478 QVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYN 537
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++I C ++ ++ L + M + + PD YT+ LI C ++ A+ +
Sbjct: 538 VMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKK 597
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
L+ + YSAL+ GR EA M Q G N D ++++ ++Q +
Sbjct: 598 NLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRL 657
Query: 485 HDIVKTSKERGI 496
++K ++G+
Sbjct: 658 FGLLKKMYDQGL 669
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 206/464 (44%), Gaps = 11/464 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + YN++I+ K + A + +M + +P T+ LI G C+ V++A
Sbjct: 423 GIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKA 482
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L ++M AP+VYT+T LI G C+ +AE ++ + M ER + P E T ++ G
Sbjct: 483 FKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEG 542
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-----LSNNSMASEAAAILRKMGDR 179
+ + KAFELL + L LV +T YR L + S A + + +
Sbjct: 543 YCKAHNMDKAFELL-----EDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKK 597
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
+ + L E I+RG+ + +L++ K
Sbjct: 598 NLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRL 657
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L ++ L + Y +ID + K ++ E M PN+VT+ ++G
Sbjct: 658 FGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNG 717
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK E+ + L +L P+ T+ +D L + ++A D EM++ G+ N
Sbjct: 718 LCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLAN 776
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
T TYNILIR C +G + + ++ +M + I PD T++ +I CR + A + +
Sbjct: 777 TATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWD 836
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ML G+ PD+ +++ LI +G D+A + M G P
Sbjct: 837 TMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKP 880
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 204/459 (44%), Gaps = 54/459 (11%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+PS + A+I L +N + A F +M + KP TYN++I G C+ +D+A
Sbjct: 494 IAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAF 553
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L++ M G P+ YTY LI G C+ RV+ ++ + ++N+ NE +L+HG
Sbjct: 554 ELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGY 613
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA----AILRKMGDRGY 181
+A ++R + LVC+ +L + +M + +L+KM D+G
Sbjct: 614 CGQGRLTEALSASCEMIQR-GINMDLVCHAVLI---DGAMKQQDMKRLFGLLKKMYDQGL 669
Query: 182 LPESSTFD-------------------------------YTVTCLVTGL----DLNETCG 206
P+S + T T + GL +++
Sbjct: 670 RPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGH 729
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+ + + + P TY +++L K G E L+H L++N +YN++I FC
Sbjct: 730 LFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATD-LHHEMLKGLLANTATYNILIRGFC 788
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K+ + AT++ EM + I P+ +T++T+I HC+ +V EL +L G +PD
Sbjct: 789 KLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSV 848
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY---------NILIRSLCAIGDVA 377
FN +I C + A + ++M+ G+ P I N L+ C G+V
Sbjct: 849 AFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVD 908
Query: 378 RSLRLFQKMQADRISPDIYTFNAL-IQSFCRMNKIEKAE 415
+LRL+ M + + + L + S+ ++K E+ E
Sbjct: 909 TALRLYHSMLTRAVKLSLEMWKCLYLLSYGVISKSEELE 947
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 166/415 (40%), Gaps = 40/415 (9%)
Query: 120 SLVHGVF-RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
SL+H + R DP FE + ++ + L + L++ N+ +A +LR M
Sbjct: 117 SLLHTLLLRGSDPKFVFEKFLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLG 176
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP-------------------- 218
LPE T + L+ + D + GVKP
Sbjct: 177 NTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCR 236
Query: 219 -----------RFS----TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
RF TY +L+ L K G +E + + L +V +Y ++
Sbjct: 237 AKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVL 296
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
FC+V D + EM + P + L+ G K + +L+V L GF P
Sbjct: 297 GFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLP 356
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG--DVARSLR 381
+ F +N++I+ LC+ + A M +P N +TY+ILI S C G DVA S
Sbjct: 357 NLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAES-- 414
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
F +M D I IY +N+LI C+ + AE + M+ GL P +++ LI
Sbjct: 415 YFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYC 474
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
K + ++A + + M + P YT ++ L EA + ER I
Sbjct: 475 KDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKI 529
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/377 (19%), Positives = 156/377 (41%), Gaps = 9/377 (2%)
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
L PH ++LI + L + L++ N++ S A + + ++ + P +S
Sbjct: 60 LKPHHVEQVLINTLHDSKLALRFFNFLGLHKNMNHTTTSFAILVHALVQNKLFWPANSLL 119
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYL---LLMEALYKAGRDVEGDRYLNH 245
T L+ G D + + F++ + +FS+ L L+ + + R + L
Sbjct: 120 H---TLLLRGSDPK---FVFEKFLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRL 173
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + L+ V + + +++ ++ E+ E + + P+ T + +I C+ +
Sbjct: 174 MLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKD 233
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ +E ++ + F T+N +I LC+ +AL+ + E G+ + +TY
Sbjct: 234 FCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCT 293
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L+ C + + L +M P + L+ + I+ A + G
Sbjct: 294 LVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFG 353
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
P+ F Y+ALI AL K D+A+ + +M + T ++++++ ++G + A
Sbjct: 354 FLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAE 413
Query: 486 DIVKTSKERGISFKSFP 502
E GI +P
Sbjct: 414 SYFGRMIEDGIRETIYP 430
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ +T YN +I K + A +M+ + PD TY+ +I+ CR G V A
Sbjct: 772 GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAA 831
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNE 115
+ L M G P+ + +LI G C + + F + M R + P +
Sbjct: 832 VELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQ 882
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/481 (25%), Positives = 213/481 (44%), Gaps = 36/481 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P Y ++ID L K AY F++M++ D Y LI + + G + +A
Sbjct: 51 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQA 110
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ K M G P+V T + +IDG A R+ R+ + M+ R + PNE +L+HG
Sbjct: 111 SSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 170
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A E+L + +K C P+
Sbjct: 171 LCKARKMDCALEMLAQM-------KKAFCT----------------------------PD 195
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-DVEGDRYL 243
+ T++ + L D+ D ++ G KP TY +L+ KAG D
Sbjct: 196 TITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLA 255
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ ++++Y ++D K ++ A + ++ P + T+N L++G CK
Sbjct: 256 QETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKM 315
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + +LL +++ G PD T+ S+ID L + R +A EM G+ +T+ Y
Sbjct: 316 GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCY 375
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LIR L G + ++ +++ M + PD+ T + +I + +I A + F SM
Sbjct: 376 TALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEA 435
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL P+ YSALI L K+ + D A + M++ C PD+ T N++++ L + G E
Sbjct: 436 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEA 495
Query: 484 A 484
A
Sbjct: 496 A 496
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 130/498 (26%), Positives = 220/498 (44%), Gaps = 5/498 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ G++ T Y A+I L+++ I A ++ M+ C PD T + +I G+ + G
Sbjct: 82 MALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGR 141
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A+R+ K ME G APN Y+ LI G C A+++ +L MK+ P+ T
Sbjct: 142 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNV 201
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY---RLSNNSMASEAAAILRKMG 177
L+ G+ + D A +E N L+ + N AS + A ++
Sbjct: 202 LIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLA--QETT 259
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
G + T+ V L + E +++ G P +TY L+ L K GR
Sbjct: 260 INGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLE 319
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E L + + +V +Y +ID K A ++ +EM R +A + V + LI
Sbjct: 320 EAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALI 379
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
+ ++ + + + G PD T ++MID L +A R A+ M G+
Sbjct: 380 RELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLA 439
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
PN + Y+ LI LC + +L + +M+ +PD T+N LI C+ +E A
Sbjct: 440 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAF 499
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F ML G +PD ++Y+ LI K+G D A F M + C+ + T ++ L +
Sbjct: 500 FDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCK 559
Query: 478 QGRFEEAHDIVKTSKERG 495
+ + +A + KERG
Sbjct: 560 RRQLTKASLYFQHMKERG 577
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 210/473 (44%), Gaps = 71/473 (15%)
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
++EA+ L++++ G P + TY L++G C R+ E +L + + P+ T S
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G+ + +A++L +E + L +T+ Y A++R++ G
Sbjct: 62 LIDGLGKEKRSFEAYKLF-----KEMALRGLALDTVCY-----------TALIRELLQTG 105
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P++S+ + T G P T +++ L KAGR
Sbjct: 106 KIPQASS-------------------VYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAV 146
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
R + L N Y+ +I CK MD A E+ +M+ P+ +T+N LI G
Sbjct: 147 RIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGL 206
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE---------- 350
CK +V R +LE G KPD +T+N +I C+A + A L++
Sbjct: 207 CKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTID 266
Query: 351 ------MVEW--------------------GVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
+V+W G P TYN L+ LC +G + ++ L +
Sbjct: 267 IHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 326
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
K+ + +PD+ T+ +LI + + +A K F M GL D Y+ALI+ L+++G
Sbjct: 327 KIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTG 386
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ +A + +M +GC PD T + +++ L + GR A I K+ + RG++
Sbjct: 387 KIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLA 439
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 86/158 (54%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ E+A+ + ++ G P TYN L+ LC +G + ++ L +K+ + +PD+ T+
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
+LI + + +A K F M GL D Y+ALI+ L+++G+ +A + +M +
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
GC PD T + +++ L + GR A I K+ + RG++
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLA 158
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/507 (25%), Positives = 234/507 (46%), Gaps = 39/507 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKP---DRFTYNILIHGICRIGVVDE 63
P+ N++++ LVKS +D+A + +M D D +T +I++ G+C +G ++E
Sbjct: 160 PTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEE 219
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
RLVK G G P+V Y ++IDG+C + R L+ +K + V P T +L++
Sbjct: 220 GRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALIN 279
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + + +LL R V N ++ + ++AA +R+M + G P
Sbjct: 280 GFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGP 339
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ +T++ + G + E L+ +RG+ P +Y LM A K G V+ L
Sbjct: 340 DITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGML 399
Query: 244 NHVF----KDRLVS-------------------------------NVNSYNMVIDCFCKV 268
+ K LVS + YN+++ CK
Sbjct: 400 FRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKN 459
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+ EM DR++ P++ F TL+ G ++ E+ + ++ +++ G P +
Sbjct: 460 GRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGY 519
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N+MI C+ + DAL CL++M P+ TY+ +I D++ +L++F +M
Sbjct: 520 NAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMK 579
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ P++ T+ +LI FC+ + +AEK F M + L P+ +Y+ L+ K+G+ ++
Sbjct: 580 HKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEK 639
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETL 475
A F M NGC P+ T + ++ L
Sbjct: 640 ATSIFELMLMNGCPPNDATFHYLINGL 666
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 123/505 (24%), Positives = 228/505 (45%), Gaps = 24/505 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++ + +++N VIDA K + A ++M+ C PD TYN +I+ C+ G + EA
Sbjct: 301 GLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEA 360
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCN----AKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++ + G PN ++YT L+ +C K +FR+ EI ++ P+ + +
Sbjct: 361 DEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEK----PDLVSYGA 416
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+HGV + A + + ME+ + N L+ L N +L +M DR
Sbjct: 417 FIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRN 476
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ F + + +L+E I I++GV P Y +++ K G+ +
Sbjct: 477 VQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDAL 536
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
LN + + +Y+ VID + K + M A ++ +M PN++T+ +LI+G
Sbjct: 537 SCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGF 596
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK A++ + ++ + P+ T+ +++ +A + E A M+ G PPN
Sbjct: 597 CKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPND 656
Query: 361 ITYNILIRSLCAIG------------DVARSLRL--FQKMQADRISPDIYTFNALIQSFC 406
T++ LI L + RSL L F M ++ I +N++I C
Sbjct: 657 ATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLC 716
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ ++ A+ MLT G D+ ++A++ L G+ E + +S + N +
Sbjct: 717 KHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRN-IISCDLNKIELQTA 775
Query: 467 TS-NLILETLVQQGRFEEAHDIVKT 490
+L L+ + QGR EA I++T
Sbjct: 776 VKYSLTLDKYLYQGRLSEASVILQT 800
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 197/440 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN +ID K + A +++ + P TY LI+G C+ G +
Sbjct: 231 GCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAV 290
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L+ +M G NV + +ID V + + M E P+ T ++++
Sbjct: 291 DQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINF 350
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A E L + ER L K L++ +AA +L ++ + G P+
Sbjct: 351 SCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPD 410
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + +V +++ + + +++GV P Y +LM L K GR L+
Sbjct: 411 LVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLS 470
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +V + ++D F + +D A +I + + + + P +V +N +I G CK
Sbjct: 471 EMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFG 530
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ L + PD++T++++ID + H AL +M++ PN ITY
Sbjct: 531 KMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYT 590
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C D+ R+ ++F+ M++ + P++ T+ L+ F + K EKA F ML
Sbjct: 591 SLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMN 650
Query: 425 GLRPDNFSYSALIKALIKSG 444
G P++ ++ LI L +
Sbjct: 651 GCPPNDATFHYLINGLTNTA 670
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 178/414 (42%), Gaps = 13/414 (3%)
Query: 98 EVFRVLEIMKERNVCPNEATVRSLV--HGVFRCLDPHKAFELLIRFMEREP-LTQKLVCN 154
E+ VLE MK +++ P +L+ +G LD +A +L E L + N
Sbjct: 109 EIELVLENMKAQHLKPTREAFSALILAYGESGSLD--RALQLFHTVREMHNCLPTVVASN 166
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL----DLNETCGILDT 210
+LL L + A + KM + +YT + +V GL + E ++
Sbjct: 167 SLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKD 226
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
+G P Y ++++ K G R L + ++ V +Y +I+ FCK
Sbjct: 227 RWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGE 286
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+ ++ EM R + N+ FN +I K V K E + + E G PD T+N+
Sbjct: 287 FEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNT 346
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
MI+ C+ R ++A + L + E G+ PN +Y L+ + C GD ++ + ++
Sbjct: 347 MINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIG 406
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
PD+ ++ A I +I+ A M+ G+ PD Y+ L+ L K+GRF K
Sbjct: 407 EKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMK 466
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFPGL 504
M PD Y +++ ++ G +EA I K +G+ PG+
Sbjct: 467 LLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVD----PGI 516
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS-- 392
+ + H+++D+L+ S E V + + + ++ R + D +L+ F S
Sbjct: 35 ILKTHQWQDSLE--SRFAESKVVVSDVAHFVIDR----VHDAELALKFFDWASTRPFSCS 88
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
D ++L++ + E +M L+P ++SALI A +SG D A Q
Sbjct: 89 LDGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQL 148
Query: 453 FLSM-EQNGCNPDSYTSNLILETLVQQGRFEEA 484
F ++ E + C P SN +L LV+ G+ + A
Sbjct: 149 FHTVREMHNCLPTVVASNSLLNGLVKSGKVDVA 181
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 229/495 (46%), Gaps = 2/495 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G + S NA+I +LV+ ++LA+ +Q++S + +T NI+++ +C+ G +++
Sbjct: 195 GFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKV 254
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ Q++ G P++ TY LI + + + E F ++ M + P T ++++G
Sbjct: 255 GTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVING 314
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A E+ + +LL E + M R +P+
Sbjct: 315 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD 374
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F ++ +L++ ++ + G+ P Y +L++ + G N
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRN 434
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +V +YN ++ CK M+ A ++ EM +R + P+ T LI GHCK
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ EL + E + D T+N+++D + + A + ++MV + P I+Y+
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 554
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
IL+ +LC+ G +A + R++ +M + I P + N++I+ +CR E M++
Sbjct: 555 ILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSM--EQNGCNPDSYTSNLILETLVQQGRFE 482
G PD SY+ LI ++ +A M EQ G PD +T N IL +Q + +
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 483 EAHDIVKTSKERGIS 497
EA +++ ERG++
Sbjct: 675 EAEVVLRKMIERGVN 689
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 121/501 (24%), Positives = 218/501 (43%), Gaps = 37/501 (7%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS G+ + N +++AL K ++ Q+ PD TYN LI G+
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNA---KRVAEVF----------------- 100
++EA L+ M G G++P VYTY +I+G C +R EVF
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 101 ---------------RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
+V M+ R+V P+ S++ R + KA E
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
+ ++ L+ M S A + +M +G + T++ + L L E
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
+ + +R + P T +L++ K G + + R+ +V +YN ++D F
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
KV +D A EI +M ++I P ++++ L++ C + + + ++ KP
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTV 585
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
NSMI CR+ D L +M+ G P+ I+YN LI +++++ L +K
Sbjct: 586 MICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK 645
Query: 386 MQADR--ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
M+ ++ + PD++T+N+++ FCR N++++AE M+ G+ PD +Y+ +I +
Sbjct: 646 MEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQ 705
Query: 444 GRFDEAKQTFLSMEQNGCNPD 464
EA + M Q G +PD
Sbjct: 706 DNLTEAFRIHDEMLQRGFSPD 726
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 186/433 (42%), Gaps = 12/433 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP YN VI+ L K + A F +M PD TY L+ C+ G V E
Sbjct: 300 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET 359
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ M P++ ++ ++ F + + + +KE + P+ L+ G
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R A L +++ + NT+L+ L M EA + +M +R P+
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 479
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-DVEG 239
S YT+T L+ G +L + ++ ++ TY L++ K G D
Sbjct: 480 S----YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + + V K+ L + + SY+++++ C + A + EM ++I P ++ N++I G
Sbjct: 536 EIWADMVSKEILPTPI-SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE--WGVP 357
+C+ L ++ GF PD ++N++I R A + +M E G+
Sbjct: 595 YCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV 654
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P+ TYN ++ C + + + +KM ++PD T+ +I F + + +A +
Sbjct: 655 PDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
Query: 418 FFSMLTLGLRPDN 430
ML G PD+
Sbjct: 715 HDEMLQRGFSPDD 727
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%)
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
N F+ LI + + ++ + E +L GF N++I L R E A
Sbjct: 162 GSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWG 221
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
E+ GV N T NI++ +LC G + + ++Q + PDI T+N LI ++
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+E+A + +M G P ++Y+ +I L K G+++ AK+ F M ++G +PDS
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGI 496
T +L ++G E + + R +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDV 371
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%)
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
F+ +I +A + +A + + + G + N LI SL IG V + ++Q++
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ ++YT N ++ + C+ K+EK + G+ PD +Y+ LI A G +
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
EA + +M G +P YT N ++ L + G++E A ++ G+S
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS 337
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 23/202 (11%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE-WGVP----------------PNTITY 363
FK + ++MI L R+ R DA CL M+ GV N +
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF 168
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
++LIR+ + + F +++ + I NALI S R+ +E A + +
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISR 228
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLS-MEQNGCNPDSYTSNLILETLVQQGRFE 482
G+ + ++ + ++ AL K G+ ++ TFLS +++ G PD T N ++ +G E
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVG-TFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 483 EAHDIVKTSKERGISFKSFPGL 504
EA +++ +G S PG+
Sbjct: 288 EAFELMNAMPGKGFS----PGV 305
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/527 (23%), Positives = 224/527 (42%), Gaps = 35/527 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++ +Y V+D L K I+ A + D P+ TY +L+ CR G +D A
Sbjct: 359 GVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGA 418
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ QME +PNV T++ +++G +A+ + MK+ + PN T +L+ G
Sbjct: 419 EQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDG 478
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+C A ++ + + ++L+ L N EA A+ + MG+RG L +
Sbjct: 479 FFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLD 538
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + L ++ + ++R + P Y + + L + G+ E +L
Sbjct: 539 HVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLK 598
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L + +YN +I C+ +A ++ EM+ I PNL+T+ TL+ G +
Sbjct: 599 EMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAG 658
Query: 305 EVHKTRELLVMLLECGFKPDKFT-----------------------------------FN 329
V K + LL + GF P T +N
Sbjct: 659 VVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYN 718
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+++ LC A L EM+ G+ P+TIT+N LI C + + + +M
Sbjct: 719 TLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ 778
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+SP+I TFN L+ +I +A+ M +GL P+N +Y L+ K EA
Sbjct: 779 GLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEA 838
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ + M G P + T N ++ + G +A ++ K RG+
Sbjct: 839 LRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGV 885
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 210/484 (43%), Gaps = 35/484 (7%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+NA+ID K + A ++M+ D YN L+ G G D A + ++M+
Sbjct: 192 WNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMK 251
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G P+V T+T LI +C KR+ E F + E M V P+ T+ +LV G+ C D
Sbjct: 252 ADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGL--CRDG- 308
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
RF SEA A+ R+M G P T+ +
Sbjct: 309 -------RF-------------------------SEAYALFREMDKIGVAPNHVTYCTFI 336
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L +NE+ G+L + RGV Y +M+ L K G+ E L H D +
Sbjct: 337 DSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNIT 396
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
N +Y +++D C+ +D A ++ +M ++ ++PN+VTF+++++G K + K
Sbjct: 397 PNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGY 456
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+ + + G P+ T+ ++ID + E ALD +M+ GV N + L+ L
Sbjct: 457 MRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRK 516
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G++ + LF+ M + D + L+ + + A K ++ L PD
Sbjct: 517 NGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVV 576
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y+ I L + G+F EAK M G PD T N ++ ++G +A ++ K
Sbjct: 577 YNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMK 636
Query: 493 ERGI 496
I
Sbjct: 637 WSSI 640
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 134/556 (24%), Positives = 239/556 (42%), Gaps = 72/556 (12%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P+ Y ++DA ++ +ID A QM P+ T++ +++G+ + G + +A
Sbjct: 395 ITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAA 454
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGF--CNAKRVA-EVFR--------------------- 101
+++M+ G APNV TY LIDGF C + A +V+R
Sbjct: 455 GYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGL 514
Query: 102 -----------VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQK 150
+ + M ER + + +L+ G+F+ + A ++ MER
Sbjct: 515 RKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDA 574
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
+V N + L SEA + L++M + G P+ +T++ ++ + ++ +L+
Sbjct: 575 VVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNE 634
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH------------------------- 245
+KP TY L+ L +AG VE +YL +
Sbjct: 635 MKWSSIKPNLITYTTLVVGLLEAGV-VEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSR 693
Query: 246 -----------VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
+ L +++ YN ++ C M +AT + EM R IAP+ +TFN
Sbjct: 694 SPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFN 753
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
LI GHCK + + +L G P+ TFN+++ L A R +A + EM +
Sbjct: 754 ALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKM 813
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G+ PN +TY+IL+ + +LRL+ +M + P T+N+LI F + + +A
Sbjct: 814 GLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQA 873
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
++ F M G+ + +Y L+ K E + M++ G P T + +
Sbjct: 874 KELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRA 933
Query: 475 LVQQGRFEEAHDIVKT 490
+ G EA ++KT
Sbjct: 934 FSKPGMTWEARRLLKT 949
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 205/470 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+S YN ++ S D A+ ++M D +P T+ LI C++ ++EA
Sbjct: 219 GLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEA 278
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + M G P+V T + L+DG C R +E + + M + V PN T + +
Sbjct: 279 FTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDS 338
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +++ LL + R ++ T++ RL EA +LR P
Sbjct: 339 LAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPN 398
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ V +++ +L ++ V P T+ ++ L K G + Y+
Sbjct: 399 CVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMR 458
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + NV +Y +ID F K + A ++ R+M + N ++L++G K+
Sbjct: 459 KMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNG 518
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L + E G D + +++D L + AL E++E + P+ + YN
Sbjct: 519 NIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYN 578
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+ I LC +G + + ++M+ + PD T+N +I + CR KA K M
Sbjct: 579 VFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWS 638
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
++P+ +Y+ L+ L+++G ++AK M G P T +L+
Sbjct: 639 SIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQA 688
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 211/498 (42%), Gaps = 45/498 (9%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++ T YN + L + LA +M D T + + G+ R G+V EA
Sbjct: 113 VAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAA 172
Query: 66 RLVKQM------EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
L + + +GLG V + LIDG+C + +A V+E M + + +
Sbjct: 173 ALAEMLVRGRGIDGLG----VVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYN 228
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+LV G F D A+E+ R M+ + + +V +T L E + R
Sbjct: 229 TLVAGFFYSGDADAAWEVAER-MKADGVEPSVVTHTTLI--------GEYCKMKR----- 274
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
+ E + + ++ GV P T L++ L + GR E
Sbjct: 275 ---------------------IEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEA 313
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ K + N +Y ID KV ++ + + EM R +A +LV + T++
Sbjct: 314 YALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDR 373
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
K+ ++ + +++L L P+ T+ ++D CRA + A L +M E V PN
Sbjct: 374 LGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPN 433
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+T++ ++ L G +A++ +KM+ I+P++ T+ LI F + E A +
Sbjct: 434 VVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYR 493
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
ML G+ +NF +L+ L K+G +EA+ F M + G D +++ L + G
Sbjct: 494 DMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTG 553
Query: 480 RFEEAHDIVKTSKERGIS 497
A + + ER +S
Sbjct: 554 NMPAALKVGQELMERNLS 571
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 164/381 (43%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+SP +YN I+ L + A ++M +PD+ TYN +I CR G +AL
Sbjct: 570 LSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKAL 629
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+L+ +M+ PN+ TYT L+ G A V + +L M P T R ++
Sbjct: 630 KLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQAC 689
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
P+ E+ M V NTL++ L + M +A +L +M RG P++
Sbjct: 690 SGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDT 749
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
TF+ + L+ + +G+ P +T+ L+ L AGR E D +
Sbjct: 750 ITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICE 809
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ K L N +Y++++ + K + A + EM + P T+N+LIS K
Sbjct: 810 MKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGM 869
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+++ +EL + G T++ +++ + + L +M E G P+ T +
Sbjct: 870 MNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISS 929
Query: 366 LIRSLCAIGDVARSLRLFQKM 386
+ R+ G + RL + +
Sbjct: 930 MSRAFSKPGMTWEARRLLKTL 950
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/510 (21%), Positives = 204/510 (40%), Gaps = 55/510 (10%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S L P RL +I AL S + A +F+ + D T N +I C +
Sbjct: 42 VSSLPAPPPARLLRRLIPALASSGLVAAAS-RFRPVPGDP-----LTLNSIILSYCSLHA 95
Query: 61 VDEALRLVKQMEGLG--YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
+ AL L++ G A + +Y I + G VL M +R V + T+
Sbjct: 96 LRPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTM 155
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAIL----- 173
+T L LS + EAAA+
Sbjct: 156 -----------------------------------STALVGLSRTGLVGEAAALAEMLVR 180
Query: 174 -RKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK 232
R + G + ++ D C V D+ +++ +G+ Y L+ +
Sbjct: 181 GRGIDGLGVVGWNALIDGY--CKVQ--DMAAALAVVERMTTQGLSLDVVGYNTLVAGFFY 236
Query: 233 AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
+G + D + +V ++ +I +CK+ ++ A + M + P++VT
Sbjct: 237 SGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVT 296
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+ L+ G C+D + L + + G P+ T+ + ID L + R ++L L EMV
Sbjct: 297 LSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMV 356
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
GV + + Y ++ L G + + + + +D I+P+ T+ L+ + CR I+
Sbjct: 357 SRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNID 416
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
AE+ M + P+ ++S+++ L+K G +A M+ +G P+ T ++
Sbjct: 417 GAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLI 476
Query: 473 ETLVQ-QGRFEEAHDIVKTSKERGISFKSF 501
+ + QG+ E A D+ + G+ +F
Sbjct: 477 DGFFKCQGQ-EAALDVYRDMLHEGVEANNF 505
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 136/365 (37%), Gaps = 76/365 (20%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN +I A + + A +M KP+ TY L+ G+ GVV++A
Sbjct: 604 GLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKA 663
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKR----VAEVFR------------------- 101
L+ +M G+ P TY ++ C+ R + EV
Sbjct: 664 KYLLNEMASAGFTPTPLTYRRVLQA-CSGSRSPYVILEVHELMMGAGLHADITVYNTLVH 722
Query: 102 -------------VLEIMKERNVCPNEATVRSLVHGVFRCLDPH--KAFELLIRFMEREP 146
VL+ M R + P+ T +L+ G C H AF + + +
Sbjct: 723 VLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILG--HCKSSHLDNAFATYAQMLHQGL 780
Query: 147 LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
NTLL L + EA ++ +M G P + T+D VT + E
Sbjct: 781 SPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALR 840
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+ + +G P+ ST YN +I F
Sbjct: 841 LYCEMVSKGFIPKAST-----------------------------------YNSLISDFA 865
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K MM++A E+ EM+ R + T++ L++G K + R LL + E GFKP K
Sbjct: 866 KAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKG 925
Query: 327 TFNSM 331
T +SM
Sbjct: 926 TISSM 930
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/505 (26%), Positives = 219/505 (43%), Gaps = 64/505 (12%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P YN+++ +V+ LA + QM P+R T+ IL++G+C+ G D+
Sbjct: 160 FGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDD 219
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL++ +M G PN YTI++ G C AKR +V R+L MK CP+ T +L+
Sbjct: 220 ALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLD 279
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + +AF LL F E+E +G +GY
Sbjct: 280 GFCKLGQIDEAFALLQLF-EKEGYV---------------------------LGIKGY-- 309
Query: 184 ESSTFDYTVTCLVTGL-------DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
+ L+ GL ++ E C K G++P Y +L+ + G
Sbjct: 310 ---------SSLIDGLFRAKRYDEVQEWC---RKMFKAGIEPDVVLYTILIRGFCEVGMV 357
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
LN + + L + YN +I FC V ++D+A + E+ D P T+ L
Sbjct: 358 DYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTIL 417
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
I G C++ + + R++ + G P TFN++ID LC+A E+A +M E G
Sbjct: 418 ICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGK 476
Query: 357 PP--------------NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
P +T + ++ LC G + ++ +L ++ + PDI T+N LI
Sbjct: 477 NPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLI 536
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
FC+ I A K F + G PD+ +Y LI + R ++A + M +NGC
Sbjct: 537 NGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCT 596
Query: 463 PDSYTSNLILETLVQQGRFEEAHDI 487
P S ++ ++G+ A +
Sbjct: 597 PSSAVYKCLMTWSCRKGKLSVAFSL 621
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 162/334 (48%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
+ L+ + + MA +A KM D G P+ T++ + +V + + +K
Sbjct: 135 SVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLK 194
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
P +T+++L+ L K G+ + + + + + + N Y +++ C+ D
Sbjct: 195 LNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDD 254
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
+ M+ P+ +T N L+ G CK ++ + LL + + G+ ++S+ID
Sbjct: 255 VHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLID 314
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
L RA R+++ + +M + G+ P+ + Y ILIR C +G V +L + M +SP
Sbjct: 315 GLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSP 374
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
D Y +NALI+ FC + ++KA + P + +Y+ LI + ++G DEA+Q F
Sbjct: 375 DTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIF 434
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
ME GC+P T N +++ L + G EEA +
Sbjct: 435 NQMENLGCSPSIMTFNALIDGLCKAGELEEARHL 468
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/499 (22%), Positives = 202/499 (40%), Gaps = 50/499 (10%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N VID L K + D + +++ + T+++LI + G+ ++A+ +M+
Sbjct: 99 HNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMK 158
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G P+V+TY ++ + V M + N PN AT L++G
Sbjct: 159 DFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNG-------- 210
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
L N +A + +M +G P + + +
Sbjct: 211 ---------------------------LCKNGKTDDALKMFDEMTQKGIPPNTMIYTIIL 243
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+ L ++ +L+T G P T L++ K G+ E L K+ V
Sbjct: 244 SGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYV 303
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+ Y+ +ID + D E CR+M I P++V + LI G C+ V +
Sbjct: 304 LGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNM 363
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L + + G PD + +N++I C + A E+ + P + TY ILI +C
Sbjct: 364 LNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCR 423
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP---- 428
G + + ++F +M+ SP I TFNALI C+ ++E+A F+ M +G P
Sbjct: 424 NGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNPSLFL 482
Query: 429 ----------DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
D S +++ L +SG +A + + + +G PD T N+++ +
Sbjct: 483 RLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKA 542
Query: 479 GRFEEAHDIVKTSKERGIS 497
A + + + +G S
Sbjct: 543 KNINGAFKLFRELQLKGHS 561
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 194/452 (42%), Gaps = 39/452 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP T YNA+I +D A ++S + C P TY ILI G+CR G++DEA
Sbjct: 371 GLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEA 430
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE---VFRVLEIMKERNVCPNEATVRSL 121
++ QME LG +P++ T+ LIDG C A + E +F +EI K N + L
Sbjct: 431 RQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGK------NPSLFLRL 484
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
G R +D T L T++ RL + + +A +L ++ D G
Sbjct: 485 SQGADRVMD-----------------TASL--QTMVERLCESGLILKAYKLLMQLADSGV 525
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P+ T++ + ++N + +G P TY L++ ++ R+ + R
Sbjct: 526 VPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFR 585
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L+ + K+ + Y ++ C+ + A + + R + L H
Sbjct: 586 VLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYL-RSLPSQEDETLKLAEEHF 644
Query: 302 KDAEVHKTRELLVMLLECGFKPDKF---TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
+ E+ K + LLE FK + F + + LC+A R E+AL + E +
Sbjct: 645 EKGELEKA---VRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDV 701
Query: 359 NTITYNILIRSLCAIG--DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
N + +LI LC G ++A + L+ + + P I N L++S +K++ A
Sbjct: 702 NPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRIC--NQLLRSLILQDKMKHALD 759
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
M + G D + + + L+ + E
Sbjct: 760 LLNRMNSAGYDLDEYLHHRIKSYLLSVWKAQE 791
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 71/170 (41%), Gaps = 35/170 (20%)
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+T+N++I L ++ ++++ I TF+ LI ++ + EKA ++F
Sbjct: 97 VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156
Query: 421 MLTLGLRPDNFSYSA-----------------------------------LIKALIKSGR 445
M G +PD F+Y++ L+ L K+G+
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
D+A + F M Q G P++ +IL L Q R ++ H ++ T K G
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSG 266
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/498 (26%), Positives = 233/498 (46%), Gaps = 4/498 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKF-QQMSVDQCKPDRFTYNILIHGICRIG 59
+ G +PS NA++ ++VKS D++ F ++M + PD T+NILI+ +C G
Sbjct: 149 MGLYGFNPSVYTCNAILGSVVKSGE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEG 207
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+++ L+++ME GYAP + TY ++ +C R +L+ MK + V + T
Sbjct: 208 SFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYN 267
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
L+H + R K + LL +R ++ NTL+ SN A+ +L +M
Sbjct: 268 MLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSF 327
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK-AGRDVE 238
G P TF+ + ++ + E + +G+ P +Y +L++ L K A D+
Sbjct: 328 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 387
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
Y+ V + +Y +ID CK +D A + EM I P++VT++ LI+
Sbjct: 388 RGFYMRMKRNGVCVGRI-TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 446
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G CK +E++ + G P+ ++++I CR ++A+ M+ G
Sbjct: 447 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 506
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ T+N+L+ SLC G VA + + M +D I P+ +F+ LI + + KA F
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M +G P F+Y +L+K L K G EA++ S+ D+ N +L + +
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 626
Query: 479 GRFEEAHDIVKTSKERGI 496
G +A + +R I
Sbjct: 627 GNLAKAVSLFGEMVQRSI 644
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 138/536 (25%), Positives = 227/536 (42%), Gaps = 44/536 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++PS Y ++D L K+ DLA + +M + R TY +I G+C+ G +DEA
Sbjct: 363 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 422
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M G P++ TY+ LI+GFC R ++ + + PN +L++
Sbjct: 423 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 482
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R +A + + N L+ L +EA +R M G LP
Sbjct: 483 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN 542
Query: 185 SSTFDYTVTCLVTGLDLN----ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ +FD CL+ G + + + D K G P F TY L++ L K G E +
Sbjct: 543 TVSFD----CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
++L + + YN ++ CK + +A + EM R I P+ T+ +LISG
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658
Query: 301 C------------KDAEVHKTRELLVMLLEC------------------------GFKPD 324
C K+AE ++ C G PD
Sbjct: 659 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 718
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
T N+MID R + E D L EM PN TYNIL+ DV+ S L++
Sbjct: 719 IVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYR 778
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+ + I PD T ++L+ C N +E K + + G+ D ++++ LI +G
Sbjct: 779 SIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANG 838
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+ A M G + D T + ++ L + RF+E+ ++ ++GIS +S
Sbjct: 839 EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 894
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 205/456 (44%), Gaps = 35/456 (7%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
C + Y+ILI R G++ ++L + + M G+ P+VYT ++ + V+
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
L+ M +R +CP+ AT F +LI + E +K
Sbjct: 179 SFLKEMLKRKICPDVAT-----------------FNILINVLCAEGSFEK---------- 211
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
++ +++KM GY P T++ + +LD +GV
Sbjct: 212 --------SSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADV 263
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY +L+ L ++ R +G L + K + N +YN +I+ F + A+++ E
Sbjct: 264 CTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNE 323
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M ++PN VTFN LI GH + + ++ M+ G P + ++ ++D LC+
Sbjct: 324 MLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE 383
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
F+ A M GV ITY +I LC G + ++ L +M D I PDI T++A
Sbjct: 384 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 443
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI FC++ + + A++ + +GL P+ YS LI + G EA + + +M G
Sbjct: 444 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 503
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
D +T N+++ +L + G+ EA + ++ GI
Sbjct: 504 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 228/486 (46%), Gaps = 9/486 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP+ +Y+ +I + + A ++ M ++ D FT+N+L+ +C+ G V E
Sbjct: 467 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 526
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ M G PN ++ LI+G+ N+ + F V + M + P T SL+
Sbjct: 527 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 586
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +A + L ++ NTLL + + ++A ++ +M R LP
Sbjct: 587 GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 646
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIK----RG-VKPRFSTYLLLMEALYKAGRDVE 238
+S YT T L++GL I F K RG V P Y ++ ++KAG+
Sbjct: 647 DS----YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 702
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
G + + ++ + N +ID + ++ +++ ++ EM +++ PNL T+N L+
Sbjct: 703 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 762
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G+ K +V + L ++ G PDK T +S++ +C ++ E L L + GV
Sbjct: 763 GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 822
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ T+N+LI CA G++ + L + M + IS D T +A++ R ++ +++
Sbjct: 823 DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 882
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M G+ P++ Y LI L + G A M + P + + ++ L +
Sbjct: 883 HEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 942
Query: 479 GRFEEA 484
G+ +EA
Sbjct: 943 GKADEA 948
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 215/484 (44%), Gaps = 2/484 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+PS +Y+ +I ++ I + F+ M + P +T N ++ + + G
Sbjct: 122 NPS--VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+K+M P+V T+ ILI+ C + +++ M++ P T +++H
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A ELL + N L++ L ++ ++ +LR M R P
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + + +L+ + G+ P T+ L++ G E + +
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
L + SY +++D CK D A M+ + +T+ +I G CK+ +
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ LL + + G PD T++++I+ C+ RF+ A + + + G+ PN I Y+ L
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I + C +G + ++R+++ M + + D +TFN L+ S C+ K+ +AE+ M + G+
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P+ S+ LI SG +A F M + G +P +T +L+ L + G EA
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 599
Query: 487 IVKT 490
+K+
Sbjct: 600 FLKS 603
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 229/498 (45%), Gaps = 13/498 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+T ++ +I+ S A+ F +M+ P FTY L+ G+C+ G + EA
Sbjct: 538 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 597
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +K + + A + Y L+ C + +A+ + M +R++ P+ T SL+ G
Sbjct: 598 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 657
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSM--ASEAAAIL---RKMGDR 179
+ R + I F + ++ N ++Y + M A + A + +M +
Sbjct: 658 LCR----KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 713
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G+ P+ T + + + +T +L + P +TY +L+ Y +DV
Sbjct: 714 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG-YSKRKDVST 772
Query: 240 D--RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
Y + + L + +++V+ C+ NM++ +I + R + + TFN LI
Sbjct: 773 SFLLYRSIILNGILPDKLTCHSLVLG-ICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 831
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
S C + E++ +L+ ++ G DK T ++M+ L R HRF+++ L EM + G+
Sbjct: 832 SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 891
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P + Y LI LC +GD+ + + ++M A +I P +A++++ + K ++A
Sbjct: 892 PESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLL 951
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
ML + L P S++ L+ K+G EA + + M G D + N+++ L
Sbjct: 952 LRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCA 1011
Query: 478 QGRFEEAHDIVKTSKERG 495
+G A ++ + K G
Sbjct: 1012 KGDMALAFELYEEMKGDG 1029
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 180/432 (41%), Gaps = 36/432 (8%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
T +YN ++ A+ KS ++ A F +M PD +TY LI G+CR G A+ K
Sbjct: 613 TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK 672
Query: 70 ------------------------------------QMEGLGYAPNVYTYTILIDGFCNA 93
QM+ LG+ P++ T +IDG+
Sbjct: 673 EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 732
Query: 94 KRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC 153
++ + +L M +N PN T L+HG + D +F L + L KL C
Sbjct: 733 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 792
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
++L+ + ++M IL+ RG + TF+ ++ ++N ++
Sbjct: 793 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 852
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G+ T ++ L + R E L+ + K + Y +I+ C+V +
Sbjct: 853 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 912
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + EM I P V + ++ K + + LL +L+ P +F +++
Sbjct: 913 AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMH 972
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
C+ +AL+ M G+ + ++YN+LI LCA GD+A + L+++M+ D
Sbjct: 973 LCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1032
Query: 394 DIYTFNALIQSF 405
+ T+ ALI+
Sbjct: 1033 NATTYKALIRGL 1044
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P +A++ AL K D A L + M + P ++ L+H C+ G V EAL
Sbjct: 925 ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L M G ++ +Y +LI G C +A F + E MK N T ++L+ G+
Sbjct: 985 ELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Query: 126 F 126
Sbjct: 1045 L 1045
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 6/205 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ LGIS +A++ L +++ + + +MS P+ Y LI+G+CR+G
Sbjct: 850 MTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD 909
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A + ++M P + ++ + E +L M + + P A+ +
Sbjct: 910 IKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTT 969
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDR 179
L+H + + +A EL + M L LV N L+ L + A + +M
Sbjct: 970 LMHLCCKNGNVIEALELRV-VMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGD 1028
Query: 180 GYLPESSTFDYTVTCLVTGLDLNET 204
G+L ++T+ L+ GL ET
Sbjct: 1029 GFLANATTYK----ALIRGLLARET 1049
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/498 (26%), Positives = 233/498 (46%), Gaps = 4/498 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKF-QQMSVDQCKPDRFTYNILIHGICRIG 59
+ G +PS NA++ ++VKS D++ F ++M + PD T+NILI+ +C G
Sbjct: 149 MGLYGFNPSVYTCNAILGSVVKSGE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEG 207
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+++ L+++ME GYAP + TY ++ +C R +L+ MK + V + T
Sbjct: 208 SFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYN 267
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
L+H + R K + LL +R ++ NTL+ SN A+ +L +M
Sbjct: 268 MLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSF 327
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK-AGRDVE 238
G P TF+ + ++ + E + +G+ P +Y +L++ L K A D+
Sbjct: 328 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 387
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
Y+ V + +Y +ID CK +D A + EM I P++VT++ LI+
Sbjct: 388 RGFYMRMKRNGVCVGRI-TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 446
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G CK +E++ + G P+ ++++I CR ++A+ M+ G
Sbjct: 447 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 506
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ T+N+L+ SLC G VA + + M +D I P+ +F+ LI + + KA F
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M +G P F+Y +L+K L K G EA++ S+ D+ N +L + +
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 626
Query: 479 GRFEEAHDIVKTSKERGI 496
G +A + +R I
Sbjct: 627 GNLAKAVSLFGEMVQRSI 644
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 138/536 (25%), Positives = 227/536 (42%), Gaps = 44/536 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++PS Y ++D L K+ DLA + +M + R TY +I G+C+ G +DEA
Sbjct: 363 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 422
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M G P++ TY+ LI+GFC R ++ + + PN +L++
Sbjct: 423 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 482
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R +A + + N L+ L +EA +R M G LP
Sbjct: 483 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN 542
Query: 185 SSTFDYTVTCLVTGLDLN----ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ +FD CL+ G + + + D K G P F TY L++ L K G E +
Sbjct: 543 TVSFD----CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
++L + + YN ++ CK + +A + EM R I P+ T+ +LISG
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658
Query: 301 C------------KDAEVHKTRELLVMLLEC------------------------GFKPD 324
C K+AE ++ C G PD
Sbjct: 659 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 718
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
T N+MID R + E D L EM PN TYNIL+ DV+ S L++
Sbjct: 719 IVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYR 778
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+ + I PD T ++L+ C N +E K + + G+ D ++++ LI +G
Sbjct: 779 SIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANG 838
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+ A M G + D T + ++ L + RF+E+ ++ ++GIS +S
Sbjct: 839 EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 894
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 205/456 (44%), Gaps = 35/456 (7%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
C + Y+ILI R G++ ++L + + M G+ P+VYT ++ + V+
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
L+ M +R +CP+ AT F +LI + E +K
Sbjct: 179 SFLKEMLKRKICPDVAT-----------------FNILINVLCAEGSFEK---------- 211
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
++ +++KM GY P T++ + +LD +GV
Sbjct: 212 --------SSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADV 263
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY +L+ L ++ R +G L + K + N +YN +I+ F + A+++ E
Sbjct: 264 CTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNE 323
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M ++PN VTFN LI GH + + ++ M+ G P + ++ ++D LC+
Sbjct: 324 MLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE 383
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
F+ A M GV ITY +I LC G + ++ L +M D I PDI T++A
Sbjct: 384 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 443
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI FC++ + + A++ + +GL P+ YS LI + G EA + + +M G
Sbjct: 444 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 503
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
D +T N+++ +L + G+ EA + ++ GI
Sbjct: 504 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 228/486 (46%), Gaps = 9/486 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP+ +Y+ +I + + A ++ M ++ D FT+N+L+ +C+ G V E
Sbjct: 467 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 526
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ M G PN ++ LI+G+ N+ + F V + M + P T SL+
Sbjct: 527 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 586
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +A + L ++ NTLL + + ++A ++ +M R LP
Sbjct: 587 GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 646
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIK----RG-VKPRFSTYLLLMEALYKAGRDVE 238
+S YT T L++GL I F K RG V P Y ++ ++KAG+
Sbjct: 647 DS----YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 702
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
G + + ++ + N +ID + ++ +++ ++ EM +++ PNL T+N L+
Sbjct: 703 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 762
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G+ K +V + L ++ G PDK T +S++ +C ++ E L L + GV
Sbjct: 763 GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 822
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ T+N+LI CA G++ + L + M + IS D T +A++ R ++ +++
Sbjct: 823 DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 882
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M G+ P++ Y LI L + G A M + P + + ++ L +
Sbjct: 883 HEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 942
Query: 479 GRFEEA 484
G+ +EA
Sbjct: 943 GKADEA 948
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 215/484 (44%), Gaps = 2/484 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+PS +Y+ +I ++ I + F+ M + P +T N ++ + + G
Sbjct: 122 NPS--VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+K+M P+V T+ ILI+ C + +++ M++ P T +++H
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A ELL + N L++ L ++ ++ +LR M R P
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + + +L+ + G+ P T+ L++ G E + +
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
L + SY +++D CK D A M+ + +T+ +I G CK+ +
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ LL + + G PD T++++I+ C+ RF+ A + + + G+ PN I Y+ L
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I + C +G + ++R+++ M + + D +TFN L+ S C+ K+ +AE+ M + G+
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P+ S+ LI SG +A F M + G +P +T +L+ L + G EA
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 599
Query: 487 IVKT 490
+K+
Sbjct: 600 FLKS 603
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 229/498 (45%), Gaps = 13/498 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+T ++ +I+ S A+ F +M+ P FTY L+ G+C+ G + EA
Sbjct: 538 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 597
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +K + + A + Y L+ C + +A+ + M +R++ P+ T SL+ G
Sbjct: 598 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 657
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSM--ASEAAAIL---RKMGDR 179
+ R + I F + ++ N ++Y + M A + A + +M +
Sbjct: 658 LCR----KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 713
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G+ P+ T + + + +T +L + P +TY +L+ Y +DV
Sbjct: 714 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG-YSKRKDVST 772
Query: 240 D--RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
Y + + L + +++V+ C+ NM++ +I + R + + TFN LI
Sbjct: 773 SFLLYRSIILNGILPDKLTCHSLVLG-ICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 831
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
S C + E++ +L+ ++ G DK T ++M+ L R HRF+++ L EM + G+
Sbjct: 832 SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 891
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P + Y LI LC +GD+ + + ++M A +I P +A++++ + K ++A
Sbjct: 892 PESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLL 951
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
ML + L P S++ L+ K+G EA + + M G D + N+++ L
Sbjct: 952 LRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCA 1011
Query: 478 QGRFEEAHDIVKTSKERG 495
+G A ++ + K G
Sbjct: 1012 KGDMALAFELYEEMKGDG 1029
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 180/432 (41%), Gaps = 36/432 (8%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
T +YN ++ A+ KS ++ A F +M PD +TY LI G+CR G A+ K
Sbjct: 613 TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK 672
Query: 70 ------------------------------------QMEGLGYAPNVYTYTILIDGFCNA 93
QM+ LG+ P++ T +IDG+
Sbjct: 673 EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 732
Query: 94 KRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC 153
++ + +L M +N PN T L+HG + D +F L + L KL C
Sbjct: 733 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 792
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
++L+ + ++M IL+ RG + TF+ ++ ++N ++
Sbjct: 793 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 852
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G+ T ++ L + R E L+ + K + Y +I+ C+V +
Sbjct: 853 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 912
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + EM I P V + ++ K + + LL +L+ P +F +++
Sbjct: 913 AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMH 972
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
C+ +AL+ M G+ + ++YN+LI LCA GD+A + L+++M+ D
Sbjct: 973 LCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1032
Query: 394 DIYTFNALIQSF 405
+ T+ ALI+
Sbjct: 1033 NATTYKALIRGL 1044
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P +A++ AL K D A L + M + P ++ L+H C+ G V EAL
Sbjct: 925 ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L M G ++ +Y +LI G C +A F + E MK N T ++L+ G+
Sbjct: 985 ELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Query: 126 F 126
Sbjct: 1045 L 1045
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 6/205 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ LGIS +A++ L +++ + + +MS P+ Y LI+G+CR+G
Sbjct: 850 MTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD 909
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A + ++M P + ++ + E +L M + + P A+ +
Sbjct: 910 IKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTT 969
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDR 179
L+H + + +A EL + M L LV N L+ L + A + +M
Sbjct: 970 LMHLCCKNGNVIEALELRV-VMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGD 1028
Query: 180 GYLPESSTFDYTVTCLVTGLDLNET 204
G+L ++T+ L+ GL ET
Sbjct: 1029 GFLANATTYK----ALIRGLLARET 1049
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/498 (26%), Positives = 233/498 (46%), Gaps = 4/498 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKF-QQMSVDQCKPDRFTYNILIHGICRIG 59
+ G +PS NA++ ++VKS D++ F ++M + PD T+NILI+ +C G
Sbjct: 189 MGLYGFNPSVYTCNAILGSVVKSGE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEG 247
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+++ L+++ME GYAP + TY ++ +C R +L+ MK + V + T
Sbjct: 248 SFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYN 307
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
L+H + R K + LL +R ++ NTL+ SN A+ +L +M
Sbjct: 308 MLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSF 367
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK-AGRDVE 238
G P TF+ + ++ + E + +G+ P +Y +L++ L K A D+
Sbjct: 368 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 427
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
Y+ V + +Y +ID CK +D A + EM I P++VT++ LI+
Sbjct: 428 RGFYMRMKRNGVCVGRI-TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 486
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G CK +E++ + G P+ ++++I CR ++A+ M+ G
Sbjct: 487 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 546
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ T+N+L+ SLC G VA + + M +D I P+ +F+ LI + + KA F
Sbjct: 547 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 606
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M +G P F+Y +L+K L K G EA++ S+ D+ N +L + +
Sbjct: 607 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 666
Query: 479 GRFEEAHDIVKTSKERGI 496
G +A + +R I
Sbjct: 667 GNLAKAVSLFGEMVQRSI 684
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 138/536 (25%), Positives = 227/536 (42%), Gaps = 44/536 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++PS Y ++D L K+ DLA + +M + R TY +I G+C+ G +DEA
Sbjct: 403 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 462
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M G P++ TY+ LI+GFC R ++ + + PN +L++
Sbjct: 463 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 522
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R +A + + N L+ L +EA +R M G LP
Sbjct: 523 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN 582
Query: 185 SSTFDYTVTCLVTGLDLN----ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ +FD CL+ G + + + D K G P F TY L++ L K G E +
Sbjct: 583 TVSFD----CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
++L + + YN ++ CK + +A + EM R I P+ T+ +LISG
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698
Query: 301 C------------KDAEVHKTRELLVMLLEC------------------------GFKPD 324
C K+AE ++ C G PD
Sbjct: 699 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 758
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
T N+MID R + E D L EM PN TYNIL+ DV+ S L++
Sbjct: 759 IVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYR 818
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+ + I PD T ++L+ C N +E K + + G+ D ++++ LI +G
Sbjct: 819 SIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANG 878
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+ A M G + D T + ++ L + RF+E+ ++ ++GIS +S
Sbjct: 879 EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 934
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 205/456 (44%), Gaps = 35/456 (7%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
C + Y+ILI R G++ ++L + + M G+ P+VYT ++ + V+
Sbjct: 159 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 218
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
L+ M +R +CP+ AT F +LI + E +K
Sbjct: 219 SFLKEMLKRKICPDVAT-----------------FNILINVLCAEGSFEK---------- 251
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
++ +++KM GY P T++ + +LD +GV
Sbjct: 252 --------SSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADV 303
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY +L+ L ++ R +G L + K + N +YN +I+ F + A+++ E
Sbjct: 304 CTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNE 363
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M ++PN VTFN LI GH + + ++ M+ G P + ++ ++D LC+
Sbjct: 364 MLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE 423
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
F+ A M GV ITY +I LC G + ++ L +M D I PDI T++A
Sbjct: 424 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 483
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI FC++ + + A++ + +GL P+ YS LI + G EA + + +M G
Sbjct: 484 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 543
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
D +T N+++ +L + G+ EA + ++ GI
Sbjct: 544 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 579
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 228/486 (46%), Gaps = 9/486 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP+ +Y+ +I + + A ++ M ++ D FT+N+L+ +C+ G V E
Sbjct: 507 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 566
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ M G PN ++ LI+G+ N+ + F V + M + P T SL+
Sbjct: 567 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 626
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +A + L ++ NTLL + + ++A ++ +M R LP
Sbjct: 627 GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 686
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIK----RG-VKPRFSTYLLLMEALYKAGRDVE 238
+S YT T L++GL I F K RG V P Y ++ ++KAG+
Sbjct: 687 DS----YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 742
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
G + + ++ + N +ID + ++ +++ ++ EM +++ PNL T+N L+
Sbjct: 743 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 802
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G+ K +V + L ++ G PDK T +S++ +C ++ E L L + GV
Sbjct: 803 GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 862
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ T+N+LI CA G++ + L + M + IS D T +A++ R ++ +++
Sbjct: 863 DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 922
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M G+ P++ Y LI L + G A M + P + + ++ L +
Sbjct: 923 HEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 982
Query: 479 GRFEEA 484
G+ +EA
Sbjct: 983 GKADEA 988
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 215/484 (44%), Gaps = 2/484 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+PS +Y+ +I ++ I + F+ M + P +T N ++ + + G
Sbjct: 162 NPS--VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+K+M P+V T+ ILI+ C + +++ M++ P T +++H
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A ELL + N L++ L ++ ++ +LR M R P
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + + +L+ + G+ P T+ L++ G E + +
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
L + SY +++D CK D A M+ + +T+ +I G CK+ +
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 459
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ LL + + G PD T++++I+ C+ RF+ A + + + G+ PN I Y+ L
Sbjct: 460 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 519
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I + C +G + ++R+++ M + + D +TFN L+ S C+ K+ +AE+ M + G+
Sbjct: 520 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 579
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P+ S+ LI SG +A F M + G +P +T +L+ L + G EA
Sbjct: 580 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 639
Query: 487 IVKT 490
+K+
Sbjct: 640 FLKS 643
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 229/498 (45%), Gaps = 13/498 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+T ++ +I+ S A+ F +M+ P FTY L+ G+C+ G + EA
Sbjct: 578 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 637
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +K + + A + Y L+ C + +A+ + M +R++ P+ T SL+ G
Sbjct: 638 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 697
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSM--ASEAAAIL---RKMGDR 179
+ R + I F + ++ N ++Y + M A + A + +M +
Sbjct: 698 LCR----KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 753
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G+ P+ T + + + +T +L + P +TY +L+ Y +DV
Sbjct: 754 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG-YSKRKDVST 812
Query: 240 D--RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
Y + + L + +++V+ C+ NM++ +I + R + + TFN LI
Sbjct: 813 SFLLYRSIILNGILPDKLTCHSLVLG-ICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 871
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
S C + E++ +L+ ++ G DK T ++M+ L R HRF+++ L EM + G+
Sbjct: 872 SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 931
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P + Y LI LC +GD+ + + ++M A +I P +A++++ + K ++A
Sbjct: 932 PESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLL 991
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
ML + L P S++ L+ K+G EA + + M G D + N+++ L
Sbjct: 992 LRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCA 1051
Query: 478 QGRFEEAHDIVKTSKERG 495
+G A ++ + K G
Sbjct: 1052 KGDMALAFELYEEMKGDG 1069
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 180/432 (41%), Gaps = 36/432 (8%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
T +YN ++ A+ KS ++ A F +M PD +TY LI G+CR G A+ K
Sbjct: 653 TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK 712
Query: 70 ------------------------------------QMEGLGYAPNVYTYTILIDGFCNA 93
QM+ LG+ P++ T +IDG+
Sbjct: 713 EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 772
Query: 94 KRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC 153
++ + +L M +N PN T L+HG + D +F L + L KL C
Sbjct: 773 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 832
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
++L+ + ++M IL+ RG + TF+ ++ ++N ++
Sbjct: 833 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 892
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G+ T ++ L + R E L+ + K + Y +I+ C+V +
Sbjct: 893 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 952
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + EM I P V + ++ K + + LL +L+ P +F +++
Sbjct: 953 AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMH 1012
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
C+ +AL+ M G+ + ++YN+LI LCA GD+A + L+++M+ D
Sbjct: 1013 LCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1072
Query: 394 DIYTFNALIQSF 405
+ T+ ALI+
Sbjct: 1073 NATTYKALIRGL 1084
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P +A++ AL K D A L + M + P ++ L+H C+ G V EAL
Sbjct: 965 ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 1024
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L M G ++ +Y +LI G C +A F + E MK N T ++L+ G+
Sbjct: 1025 ELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
Query: 126 F 126
Sbjct: 1085 L 1085
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 6/202 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGIS +A++ L +++ + + +MS P+ Y LI+G+CR+G +
Sbjct: 893 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 952
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + ++M P + ++ + E +L M + + P A+ +L+H
Sbjct: 953 AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMH 1012
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ + +A EL + M L LV N L+ L + A + +M G+L
Sbjct: 1013 LCCKNGNVIEALELRV-VMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFL 1071
Query: 183 PESSTFDYTVTCLVTGLDLNET 204
++T+ L+ GL ET
Sbjct: 1072 ANATTYK----ALIRGLLARET 1089
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 228/495 (46%), Gaps = 5/495 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ YNA+ID L K+ D A F++M+ +P+ TY ILIH +C+ G++++
Sbjct: 355 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 414
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L +M G VY Y LI+G+C + +L M + + P A+ L+
Sbjct: 415 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIA 474
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R D EL ER L+ + EAA + KM D +P
Sbjct: 475 GLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 534
Query: 184 ESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
TF+ + CLV ++ + + D ++ G+KP TY L+ L + +
Sbjct: 535 NEVTFNVMIEGYCLVG--NIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 592
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
++ + V N S ++ F + + EM R + +LV+F ++
Sbjct: 593 FVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 652
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + K+ L + E G KPD + MID L + AL+C +MV G PNT+
Sbjct: 653 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTV 712
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
T+ +LI +LC G + + L ++M A + P+ +T+N + F +EKA+ +M
Sbjct: 713 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 772
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
L G S++ LIK L K+G+ EA + ++G +PD + + I+ L + G
Sbjct: 773 LQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 831
Query: 482 EEAHDIVKTSKERGI 496
+A ++ +G+
Sbjct: 832 NKAFELWNEMLYKGL 846
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 229/493 (46%), Gaps = 2/493 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ + + ++ +LVK LA F +M D + Y I C +D A
Sbjct: 181 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 240
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LV +ME G + Y +L+ G C RV E V +M V +E T R+LV+G
Sbjct: 241 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 300
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + A + + + + C+ ++ L + EA ++ K+GD G +P
Sbjct: 301 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 360
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + L ++ + RG++P TY +L+ AL K G +E L
Sbjct: 361 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM-IEDALCLF 419
Query: 245 HVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+D+ + V YN +I+ +CK +DRA + M + P +++ LI+G C++
Sbjct: 420 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 479
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ EL + E G + +TF ++I+ C+ + ++A +M++ V PN +T+
Sbjct: 480 GDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 539
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N++I C +G++ ++ +L+ +M + PD YT+ +LI C + + KA + +
Sbjct: 540 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 599
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+NFS +AL+ + GRF E + M G D + +I+ ++Q E+
Sbjct: 600 SYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 659
Query: 484 AHDIVKTSKERGI 496
+ + + KE+G+
Sbjct: 660 SCVLFREMKEQGV 672
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 220/476 (46%), Gaps = 11/476 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + YN++I+ K S+D A M + P +Y+ LI G+CR G +
Sbjct: 426 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSC 485
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L ++M G A N YT+T LI+GFC K++ E R+ + M + NV PNE T ++ G
Sbjct: 486 MELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 545
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KAF+L + +E +L+ L S S+A + + + Y
Sbjct: 546 YCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADL-ENSY--- 601
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ ++++T L+ G ET + D RGVK ++ +++ A K D E
Sbjct: 602 AVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQ-HDKEKS 660
Query: 241 RYLNHVFKDRLVSNVNS-YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L K++ V + Y +ID K M +A +M +PN VT LI+
Sbjct: 661 CVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINN 720
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK + L +L P+KFT+N +D E A D S M++ G +
Sbjct: 721 LCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLAS 779
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+++NILI+ LC G + ++ L K+ SPD +++ +I C+M I KA + +
Sbjct: 780 IVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWN 839
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
ML GL+PD +Y+ I+ G D+A + +M ++G P+ T +L +
Sbjct: 840 EMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 895
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 121/520 (23%), Positives = 216/520 (41%), Gaps = 35/520 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ +Y A I A +S ++D A +M + K YN+L++G+C+ V EA
Sbjct: 216 GVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEA 275
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + M +G + TY L+ GFC + + R+ M P+EA ++
Sbjct: 276 VEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDE 335
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF L + + + N L+ +L N +A + ++M RG P
Sbjct: 336 LRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPN 395
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L + + + D +G+K Y L+ K G L+
Sbjct: 396 EVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 455
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K+ L SY+ +I C+ + E+ REM +R IA N TF LI+G CKD
Sbjct: 456 GMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDK 515
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + L +++ P++ TFN MI+ C A +MVE G+ P+ TY
Sbjct: 516 KMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYR 575
Query: 365 ILIRSLCAIGDVAR-----------------------------------SLRLFQKMQAD 389
LI LC V++ + L+ +M
Sbjct: 576 SLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVR 635
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ D+ +F ++ + + + EK+ F M G++PD+ Y+ +I AL K +A
Sbjct: 636 GVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQA 695
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+ M +G +P++ T +++ L + G A + K
Sbjct: 696 LNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCK 735
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 135/296 (45%), Gaps = 2/296 (0%)
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV-SNVNSYNMVIDCF 265
+ D ++ GV Y + A Y R+++G R L + V ++ YN+++
Sbjct: 208 LFDKMLQSGVHLDEYVYTAGIRA-YCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGL 266
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
CK + A E+ M + + + VT+ TL+ G C+ E+ + ++ GF P +
Sbjct: 267 CKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSE 326
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
+ MID L + E+A ++ + G+ PN YN LI LC + RLF++
Sbjct: 327 ANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKE 386
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M + P+ T+ LI + C+ IE A F M G++ + Y++LI K G
Sbjct: 387 MAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGS 446
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
D A+ M + G P + + + ++ L + G ++ + ERGI++ ++
Sbjct: 447 LDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNY 502
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 116/250 (46%), Gaps = 2/250 (0%)
Query: 255 VNSY--NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
VN Y + ++ K+ A ++ +M + + + I +C+ + R L
Sbjct: 184 VNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGL 243
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+V + G K +N ++ LC+ R ++A++ + MV GV + +TY L+ C
Sbjct: 244 VVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR 303
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
+ ++ +LR+ M P + +I + +E+A + LG+ P+ F+
Sbjct: 304 MEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFA 363
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y+ALI L K+ RFD+A + F M G P+ T +++ L ++G E+A + +
Sbjct: 364 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 423
Query: 493 ERGISFKSFP 502
++GI +P
Sbjct: 424 DKGIKVTVYP 433
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 232/487 (47%), Gaps = 7/487 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS + Y++++ L K I+ ++M KP+ +T+ I I + R G ++EA
Sbjct: 220 GFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 279
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++K+M+ G P+V TYT+LID C A+++ V MK P+ T +L+
Sbjct: 280 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDR 339
Query: 125 VF--RCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMGDRGY 181
R LD F ME++ +V T+L L EA A L M D+G
Sbjct: 340 FSDNRDLDSVNQF---WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGI 396
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
LP T++ + L+ L++ I D GVKP TY++ ++ K+G V
Sbjct: 397 LPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 456
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + N+ + N + K A +I ++D + P+ VT+N ++ +
Sbjct: 457 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 516
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K E+ + +LL ++E +PD NS+I+ L +A R ++A M E + P +
Sbjct: 517 KVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 576
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN L+ L G + ++ LF+ M P+ TFN L C+ +++ A K F M
Sbjct: 577 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 636
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ +G PD F+Y+ +I L+K+G+ EA F M++ PD T +L +V+ G
Sbjct: 637 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKAGLI 695
Query: 482 EEAHDIV 488
E+A+ I+
Sbjct: 696 EDAYKII 702
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/536 (24%), Positives = 248/536 (46%), Gaps = 49/536 (9%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ YN ++ L K+ I A F+ M C P+ T+N L +C+ V AL
Sbjct: 571 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 630
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+++ +M +G P+V+TY +I G +V E MK + V P+ T+ +L+ GV
Sbjct: 631 KMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGV 689
Query: 126 FRCLDPHKAFELLIRFM---EREP-----------------------LTQKLVCNTLL-- 157
+ A++++ F+ +P +++LV N +
Sbjct: 690 VKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRD 749
Query: 158 ----------YRLSNNSMASEAAAILRKM-GDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
Y +N+ AS A + K D G P+ T++ + L+ D+ E
Sbjct: 750 GDSILVPIIRYSFKHNN-ASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEA-DMIEIAQ 807
Query: 207 ILDTFIK---RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
D F++ G P +TY L++A K+G+ E + N ++N+VI
Sbjct: 808 --DVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVIS 865
Query: 264 CFCKVNMMDRATEICRE-MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
K +D A ++ + M DRD +P T+ LI G K +++ ++L + + G +
Sbjct: 866 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCR 925
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P+ +N +I+ +A + A MV+ GV P+ TY++L+ LC +G V L
Sbjct: 926 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 985
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM-LTLGLRPDNFSYSALIKALI 441
F++++ ++PD+ +N +I + +++E+A F M + G+ PD ++Y++LI L
Sbjct: 986 FRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLG 1045
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+G +EA + + +++ G P+ +T N ++ G+ E A+ + +T G S
Sbjct: 1046 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFS 1101
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/487 (25%), Positives = 215/487 (44%), Gaps = 47/487 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGIC------- 56
LG+ P+ + I L ++ I+ AY ++M + C PD TY +LI +C
Sbjct: 254 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 313
Query: 57 ----------------RIGVV------------DEALRLVKQMEGLGYAPNVYTYTILID 88
R+ + D + +ME G+ P+V T+TIL+D
Sbjct: 314 AKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVD 373
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
C A E F L++M+++ + PN T +L+ G+ R H+ + L F E L
Sbjct: 374 ALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRV---HRLDDALEIFDNMESLG 430
Query: 149 QKLVCNTLL-----YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
K T + Y S +S++ A KM +G P + ++ L E
Sbjct: 431 VKPTAYTYIVFIDYYGKSGDSVS--ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 488
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
I G+ P TY ++M+ K G E + L+ + ++ +V N +I+
Sbjct: 489 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLIN 548
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
K + +D A ++ M++ + P +VT+NTL++G K+ ++ + EL +++ G P
Sbjct: 549 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 608
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
+ TFN++ DCLC+ AL L +M++ G P+ TYN +I L G V ++ F
Sbjct: 609 NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFF 668
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML-TLGLRPDNFSYSALIKALIK 442
+M+ + PD T L+ + IE A K + L + +P N + L+ +++
Sbjct: 669 HQMKK-LVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILA 727
Query: 443 SGRFDEA 449
D A
Sbjct: 728 EAGIDNA 734
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 128/506 (25%), Positives = 226/506 (44%), Gaps = 47/506 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+T +N + D L K++ + LA +M C PD FTYN +I G+ + G V EA
Sbjct: 605 GCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 664
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL--------------------- 103
+ QM+ L Y P+ T L+ G A + + ++++
Sbjct: 665 MCFFHQMKKLVY-PDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMG 723
Query: 104 EIMKERNVCPNEATV--RSLVHGVFRCLDPHKAFELLIRF-----------MEREPLTQK 150
I+ E + N + R + +G+ C D +IR+ M E T+
Sbjct: 724 SILAEAGI-DNAVSFSERLVANGI--CRDGDSILVPIIRYSFKHNNASGARMLFEKFTKD 780
Query: 151 L-------VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
L N L+ L M A + ++ + G +P+ +T+++ + ++E
Sbjct: 781 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDE 840
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-DVEGDRYLNHVFKDRLVSNVNSYNMVI 262
I +P T+ +++ L KAG D D Y + + +Y +I
Sbjct: 841 LFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 900
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
D K + A ++ M D PN +N LI+G K E L +++ G +
Sbjct: 901 DGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 960
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
PD T++ ++DCLC R ++ L E+ E G+ P+ + YN++I L + +L L
Sbjct: 961 PDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVL 1020
Query: 383 FQKMQADR-ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
F +M+ R I+PD+YT+N+LI + +E+A K + + GL P+ F+++ALI+
Sbjct: 1021 FNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYS 1080
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYT 467
SG+ + A + +M G +P++ T
Sbjct: 1081 LSGKPEHAYAVYQTMVTGGFSPNTGT 1106
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/507 (24%), Positives = 220/507 (43%), Gaps = 39/507 (7%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
+T N +++AL I+ F M K D TY + + G + +A +
Sbjct: 119 TTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFAL 178
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
++M G+ N Y+Y LI ++ E V M P+ T SL+ G+ +
Sbjct: 179 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKR 238
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLPESST 187
D LL + ME L + T+ R L +EA IL++M D G P+ T
Sbjct: 239 RDIESVMGLL-KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 297
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG-DRYLNHV 246
+ + L T L+ + KP TY+ L++ + RD++ +++ + +
Sbjct: 298 YTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDR-FSDNRDLDSVNQFWSEM 356
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
KD V +V ++ +++D CK A MRD+ I PNL T+NTLI G + +
Sbjct: 357 EKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRL 416
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN------- 359
E+ + G KP +T+ ID ++ AL+ +M G+ PN
Sbjct: 417 DDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 476
Query: 360 ----------------------------TITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
++TYN++++ +G++ +++L +M +
Sbjct: 477 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCC 536
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
PD+ N+LI + + +++++A K F M + L+P +Y+ L+ L K+G+ EA +
Sbjct: 537 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 596
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQ 478
F M Q GC P++ T N + + L +
Sbjct: 597 LFEGMVQKGCPPNTITFNTLFDCLCKN 623
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 188/438 (42%), Gaps = 43/438 (9%)
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFE----LLIRFMEREPLTQK 150
++ E+ V ++M++R + + T + +F+CL L + E +
Sbjct: 135 KIEEMAYVFDLMQKRIIKRDTNTYLT----IFKCLSVKGGLRQAPFALRKMREFGFVLNA 190
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
N L++ L + +EA + R+M G+ P T+ + L D+ G+L
Sbjct: 191 YSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKE 250
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
G+KP T+ + + L +AG+ E L + + +V +Y ++ID C
Sbjct: 251 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 310
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+D A E+ +M+ P+ VT+ TL+ + ++ + + + G PD TF
Sbjct: 311 LDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTI 370
Query: 331 MIDCLCRA-----------------------------------HRFEDALDCLSEMVEWG 355
++D LC+A HR +DAL+ M G
Sbjct: 371 LVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLG 430
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
V P TY + I GD +L F+KM+ I+P+I NA + S + + +A+
Sbjct: 431 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 490
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ F+ + +GL PD+ +Y+ ++K K G DEA + M +N C PD N ++ TL
Sbjct: 491 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTL 550
Query: 476 VQQGRFEEAHDIVKTSKE 493
+ R +EA + KE
Sbjct: 551 YKADRVDEAWKMFMRMKE 568
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 156/365 (42%), Gaps = 37/365 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P YN +I L++++ I++A F Q+ C PD TYN L+ + G +DE
Sbjct: 781 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDE 840
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV-LEIMKERNVCPNEATVRSLV 122
+ K+M PN T+ I+I G A V + + ++M +R+ P T L+
Sbjct: 841 LFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 900
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G LS + EA + M D G
Sbjct: 901 DG-----------------------------------LSKSGRLYEAKQLFEGMSDYGCR 925
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P + ++ + + + C + +K GV+P TY +L++ L GR EG Y
Sbjct: 926 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 985
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM-RDRDIAPNLVTFNTLISGHC 301
+ + L +V YN++I+ K + ++ A + EM + R I P+L T+N+LI
Sbjct: 986 FRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLG 1045
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
V + ++ + G +P+ FTFN++I + + E A MV G PNT
Sbjct: 1046 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTG 1105
Query: 362 TYNIL 366
TY L
Sbjct: 1106 TYEQL 1110
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 159/343 (46%), Gaps = 2/343 (0%)
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
T+ LS +A LRKM + G++ + +++ + L+ E + I
Sbjct: 160 TIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILD 219
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDR-YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G +P TY LM L K RD+E L + L NV ++ + I + ++
Sbjct: 220 GFRPSLQTYSSLMVGLGKR-RDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE 278
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A EI + M D P++VT+ LI C ++ +E+ + KPD+ T+ +++D
Sbjct: 279 AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLD 338
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
+ SEM + G P+ +T+ IL+ +LC G+ + M+ I P
Sbjct: 339 RFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILP 398
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
+++T+N LI R+++++ A + F +M +LG++P ++Y I KSG A +TF
Sbjct: 399 NLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 458
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M+ G P+ N L +L + GR EA I K+ G+
Sbjct: 459 EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGL 501
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/476 (23%), Positives = 197/476 (41%), Gaps = 47/476 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P YN +I LVK+ + A F QM PD T L+ G+ + G++++
Sbjct: 639 MGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKAGLIED 697
Query: 64 ALRLVKQM-----------------------EGLGYAPNVYTYTILIDGFC--------- 91
A +++ G+ A + ++ ++ +G C
Sbjct: 698 AYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVS-FSERLVANGICRDGDSILVP 756
Query: 92 ---------NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFM 142
NA +F + K+ V P T L+ G+ A ++ ++
Sbjct: 757 IIRYSFKHNNASGARMLFE--KFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVK 814
Query: 143 EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
+ N LL + E I ++M P + T + ++ LV +++
Sbjct: 815 NTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVD 874
Query: 203 ETCGIL-DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
+ + D R P TY L++ L K+GR E + + N YN++
Sbjct: 875 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNIL 934
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
I+ F K D A + + M + P+L T++ L+ C V + L E G
Sbjct: 935 INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGL 994
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW-GVPPNTITYNILIRSLCAIGDVARSL 380
PD +N +I+ L + HR E+AL +EM + G+ P+ TYN LI +L G V +
Sbjct: 995 NPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAG 1054
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+++ ++Q + P+++TFNALI+ + K E A + +M+T G P+ +Y L
Sbjct: 1055 KIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 145/320 (45%)
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
G+ + + T +Y + L + E + D KR +K +TYL + + L G
Sbjct: 112 GNSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGL 171
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
+ L + + V N SYN +I K A E+ R M P+L T+++L
Sbjct: 172 RQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSL 231
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ G K ++ LL + G KP+ +TF I L RA + +A + L M + G
Sbjct: 232 MVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC 291
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
P+ +TY +LI +LC + + +F KM+ R PD T+ L+ F ++ +
Sbjct: 292 GPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQ 351
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
+ M G PD +++ L+ AL K+G F EA M G P+ +T N ++ L+
Sbjct: 352 FWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLL 411
Query: 477 QQGRFEEAHDIVKTSKERGI 496
+ R ++A +I + G+
Sbjct: 412 RVHRLDDALEIFDNMESLGV 431
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 5/192 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G P+ +YN +I+ K+ D A F++M + +PD TY++L+ +C +G
Sbjct: 919 MSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 978
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL-EIMKERNVCPNEATVR 119
VDE L ++++ G P+V Y ++I+G R+ E + E+ K R + P+ T
Sbjct: 979 VDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYN 1038
Query: 120 SLV--HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
SL+ G+ ++ I+ EP N L+ S + A A+ + M
Sbjct: 1039 SLILNLGIAGMVEEAGKIYNEIQRAGLEP--NVFTFNALIRGYSLSGKPEHAYAVYQTMV 1096
Query: 178 DRGYLPESSTFD 189
G+ P + T++
Sbjct: 1097 TGGFSPNTGTYE 1108
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 228/495 (46%), Gaps = 5/495 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ YNA+ID L K+ D A F++M+ +P+ TY ILIH +C+ G++++
Sbjct: 332 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 391
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L +M G VY Y LI+G+C + +L M + + P A+ L+
Sbjct: 392 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIA 451
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R D EL ER L+ + EAA + KM D +P
Sbjct: 452 GLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 511
Query: 184 ESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
TF+ + CLV ++ + + D ++ G+KP TY L+ L + +
Sbjct: 512 NEVTFNVMIEGYCLVG--NIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 569
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
++ + V N S ++ F + + EM R + +LV+F ++
Sbjct: 570 FVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 629
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + K+ L + E G KPD + MID L + AL+C +MV G PNT+
Sbjct: 630 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTV 689
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
T+ +LI +LC G + + L ++M A + P+ +T+N + F +EKA+ +M
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
L G S++ LIK L K+G+ EA + ++G +PD + + I+ L + G
Sbjct: 750 LQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 808
Query: 482 EEAHDIVKTSKERGI 496
+A ++ +G+
Sbjct: 809 NKAFELWNEMLYKGL 823
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 229/493 (46%), Gaps = 2/493 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ + + ++ +LVK LA F +M D + Y I C +D A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LV +ME G + Y +L+ G C RV E V +M V +E T R+LV+G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + A + + + + C+ ++ L + EA ++ K+GD G +P
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + L ++ + RG++P TY +L+ AL K G +E L
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM-IEDALCLF 396
Query: 245 HVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+D+ + V YN +I+ +CK +DRA + M + P +++ LI+G C++
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 456
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ EL + E G + +TF ++I+ C+ + ++A +M++ V PN +T+
Sbjct: 457 GDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 516
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N++I C +G++ ++ +L+ +M + PD YT+ +LI C + + KA + +
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+NFS +AL+ + GRF E + M G D + +I+ ++Q E+
Sbjct: 577 SYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 636
Query: 484 AHDIVKTSKERGI 496
+ + + KE+G+
Sbjct: 637 SCVLFREMKEQGV 649
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 220/476 (46%), Gaps = 11/476 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + YN++I+ K S+D A M + P +Y+ LI G+CR G +
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSC 462
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L ++M G A N YT+T LI+GFC K++ E R+ + M + NV PNE T ++ G
Sbjct: 463 MELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 522
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KAF+L + +E +L+ L S S+A + + + Y
Sbjct: 523 YCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADL-ENSY--- 578
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ ++++T L+ G ET + D RGVK ++ +++ A K D E
Sbjct: 579 AVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQ-HDKEKS 637
Query: 241 RYLNHVFKDRLVSNVNS-YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L K++ V + Y +ID K M +A +M +PN VT LI+
Sbjct: 638 CVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINN 697
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK + L +L P+KFT+N +D E A D S M++ G +
Sbjct: 698 LCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLAS 756
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+++NILI+ LC G + ++ L K+ SPD +++ +I C+M I KA + +
Sbjct: 757 IVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWN 816
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
ML GL+PD +Y+ I+ G D+A + +M ++G P+ T +L +
Sbjct: 817 EMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 121/520 (23%), Positives = 216/520 (41%), Gaps = 35/520 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ +Y A I A +S ++D A +M + K YN+L++G+C+ V EA
Sbjct: 193 GVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEA 252
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + M +G + TY L+ GFC + + R+ M P+EA ++
Sbjct: 253 VEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDE 312
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF L + + + N L+ +L N +A + ++M RG P
Sbjct: 313 LRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPN 372
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L + + + D +G+K Y L+ K G L+
Sbjct: 373 EVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 432
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K+ L SY+ +I C+ + E+ REM +R IA N TF LI+G CKD
Sbjct: 433 GMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDK 492
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + L +++ P++ TFN MI+ C A +MVE G+ P+ TY
Sbjct: 493 KMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYR 552
Query: 365 ILIRSLCAIGDVAR-----------------------------------SLRLFQKMQAD 389
LI LC V++ + L+ +M
Sbjct: 553 SLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVR 612
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ D+ +F ++ + + + EK+ F M G++PD+ Y+ +I AL K +A
Sbjct: 613 GVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQA 672
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+ M +G +P++ T +++ L + G A + K
Sbjct: 673 LNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCK 712
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 135/296 (45%), Gaps = 2/296 (0%)
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV-SNVNSYNMVIDCF 265
+ D ++ GV Y + A Y R+++G R L + V ++ YN+++
Sbjct: 185 LFDKMLQSGVHLDEYVYTAGIRA-YCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGL 243
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
CK + A E+ M + + + VT+ TL+ G C+ E+ + ++ GF P +
Sbjct: 244 CKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSE 303
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
+ MID L + E+A ++ + G+ PN YN LI LC + RLF++
Sbjct: 304 ANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKE 363
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M + P+ T+ LI + C+ IE A F M G++ + Y++LI K G
Sbjct: 364 MAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGS 423
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
D A+ M + G P + + + ++ L + G ++ + ERGI++ ++
Sbjct: 424 LDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNY 479
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 116/250 (46%), Gaps = 2/250 (0%)
Query: 255 VNSY--NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
VN Y + ++ K+ A ++ +M + + + I +C+ + R L
Sbjct: 161 VNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGL 220
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+V + G K +N ++ LC+ R ++A++ + MV GV + +TY L+ C
Sbjct: 221 VVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR 280
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
+ ++ +LR+ M P + +I + +E+A + LG+ P+ F+
Sbjct: 281 MEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFA 340
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y+ALI L K+ RFD+A + F M G P+ T +++ L ++G E+A + +
Sbjct: 341 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400
Query: 493 ERGISFKSFP 502
++GI +P
Sbjct: 401 DKGIKVTVYP 410
>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 237/494 (47%), Gaps = 15/494 (3%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
L +PS + ++ +LVK F Q+ + KP+ + +ILI+ C +G +
Sbjct: 64 LLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMR 123
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A + ++ +GY PN T T L+ GFC +V E + + N+ + +L+
Sbjct: 124 FAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLI 183
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G+ + + A ++L + + T ++ +T++ L + + ++A + +M +
Sbjct: 184 NGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRIS 243
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T + + E G+L + + + P T+ +L++AL K G+ E
Sbjct: 244 PTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSG 303
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + K+ ++ +V +Y+ ++D +C VN +++A + ++ +I+G CK
Sbjct: 304 IAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHV---------------YSIVINGFCK 348
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
V K L + PD T+NS+ID LC++ R A + + EM + G P + IT
Sbjct: 349 IKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIIT 408
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN LI +LC V +++ L +K++ I D+YT+N LI C+ +++ A+ F +L
Sbjct: 409 YNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLL 468
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G ++Y+ +I L G +EA+ ME NGC PD+ T I+ L + + E
Sbjct: 469 IKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNE 528
Query: 483 EAHDIVKTSKERGI 496
A +++ RG+
Sbjct: 529 RAEKLLREMIARGL 542
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 210/460 (45%), Gaps = 15/460 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F GI P+ + +I+ + A+ F ++ P+ T L+ G C
Sbjct: 97 LEFNGIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHK 156
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V EAL + LG+ N +Y LI+G C ++L ++ + V + +
Sbjct: 157 VKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYST 216
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ + + A+EL + + + N+L+Y EA +LR+M +
Sbjct: 217 IIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKN 276
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ TF+ V L + E + +K GV P TY LM +G
Sbjct: 277 INPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLM----------DGY 326
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+N V K + V Y++VI+ FCK+ M+D+A + EMR R IAP+ VT+N+LI G
Sbjct: 327 CLVNEVNKAKHV-----YSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGL 381
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK + EL+ + + G D T+NS+ID LC+ H + A+ + ++ + G+ +
Sbjct: 382 CKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDM 441
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
TYNILI LC G + + +FQ + + ++T+ +I C + +AE
Sbjct: 442 YTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSK 501
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
M G PD + +I+AL ++ + + A++ M G
Sbjct: 502 MEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARG 541
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 162/337 (48%), Gaps = 23/337 (6%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN----ETCGILDTFIKRGVKPRFSTYL 224
A +I K+ GY P + T+T LV G LN E D + G +Y
Sbjct: 125 AFSIFAKILKMGYHPNT----ITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYG 180
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
L+ L K G + L + + ++V Y+ +ID CK +++ A E+ EM +
Sbjct: 181 TLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITK 240
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
I+P +VT N+LI G+C + + LL ++ PD +TFN ++D LC+ + ++A
Sbjct: 241 RISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEA 300
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
++ M++ GV P+ +TY+ L+ C + +V ++ + ++ +I
Sbjct: 301 KSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAK---------------HVYSIVING 345
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
FC++ ++KA F+ M + PD +Y++LI L KSGR A + M +G D
Sbjct: 346 FCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPAD 405
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
T N +++ L + ++A +VK K++GI +
Sbjct: 406 IITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMY 442
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 4/179 (2%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P T YN++ID L KS I A+ +M D TYN LI +C+ VD+A+
Sbjct: 367 IAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAI 426
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
LVK+++ G ++YTY ILIDG C R+ + + + + + T +++G+
Sbjct: 427 ALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGL 486
Query: 126 FRCLDP--HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
CL+ ++A LL + + + + C T++ L N A +LR+M RG L
Sbjct: 487 --CLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGLL 543
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 75/175 (42%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P F ++ L + + + ++ G+ PN ++ +ILI C +G + + +
Sbjct: 69 PSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSI 128
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
F K+ P+ T L++ FC +K+++A +L LG + SY LI L K
Sbjct: 129 FAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCK 188
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G A Q +E + D + I++ L + +A+++ + IS
Sbjct: 189 IGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRIS 243
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 51/108 (47%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+D + M+ P+ I + ++ SL + + LF +++ + I P+I + + L
Sbjct: 53 DDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSIL 112
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
I +C + ++ A F +L +G P+ + + L+K + + EA
Sbjct: 113 INCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEA 160
>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 766
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 216/464 (46%), Gaps = 1/464 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP+ Y A I L ++ ++ A + + + + + YN +IH CR G + EA
Sbjct: 283 GESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEA 342
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ M G +P Y+Y+ILIDG C +V + ++E M + NV P+ T SL G
Sbjct: 343 FELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDG 402
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + + + NTL+ A ++ +M G +P
Sbjct: 403 LCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPN 462
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S TF+ + L++ + +K GV+ T ++ + + G E + +N
Sbjct: 463 SFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLIN 522
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
V +V N +YN+VI CK ++A E+ M ++ P + +NTLI G+ K +
Sbjct: 523 EVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQS 582
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
K L +L+ G P T+ +I+ + ++A EM++ G+ P+ I +
Sbjct: 583 NPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFT 642
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I C +GD+ + L+++M SP++ T+ LI + ++ +++KA+ F M
Sbjct: 643 CIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRD 702
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+ PD +Y+ALI G D ++ F M++NG P+ YT+
Sbjct: 703 NVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPN-YTA 745
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 192/436 (44%), Gaps = 5/436 (1%)
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAK-----RVAEVFRVLEIMKERNVCPNEATVRSL 121
L ++++ G +PNV+TYTI+++ +C + + VLE M+ P T +
Sbjct: 235 LFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAY 294
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+HG+ R A L+ R N +++ N EA +L M G
Sbjct: 295 IHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGI 354
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P + ++ + L + + +++ ++ VKP TY L + L K+G
Sbjct: 355 SPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLS 414
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+++ + +V SYN +I+ F M A ++ EMR PN TFN LI G C
Sbjct: 415 MFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFC 474
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + K E+ ++L+ G + + FT N M D R F +AL ++E+ + G+ PN+
Sbjct: 475 KRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSY 534
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYNI+I+ LC ++ + M + + P +N LI + + + KA + M
Sbjct: 535 TYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKM 594
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
L +G+ P +Y+ LI + EA F M + G PD I+ + G
Sbjct: 595 LKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDM 654
Query: 482 EEAHDIVKTSKERGIS 497
+ A + + + G S
Sbjct: 655 KSAWALYEEMSQWGKS 670
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 116/532 (21%), Positives = 214/532 (40%), Gaps = 75/532 (14%)
Query: 5 GISPSTRLYNAVIDALVKSN---SIDL--AYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
G SP+ Y +++ K + +ID+ A ++M ++ P TY IHG+CR G
Sbjct: 243 GPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAG 302
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
V+ ALRL++ + N Y Y +I FC + E F +LE M+ + P +
Sbjct: 303 CVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYS 362
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
L+ G+ + KA +L+ ++ + ++L L + + + ++ +G
Sbjct: 363 ILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAE 422
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
GY + +++ + V D+ C ++ G P
Sbjct: 423 GYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVP--------------------- 461
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI---------------------- 277
N ++N +I FCK +D+A E+
Sbjct: 462 --------------NSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADE 507
Query: 278 -------------CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
E++D I PN T+N +I CK+ + K E+L ++L+ P
Sbjct: 508 FNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPC 567
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
+N++ID + AL ++M++ G+PP+ +TY +LI + + LF+
Sbjct: 568 AIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFK 627
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+M + PD F +I FC++ ++ A + M G P+ +Y+ LI K
Sbjct: 628 EMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIK 687
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
R D+A F M+++ PD T ++ G + ++ KE G+
Sbjct: 688 RMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGV 739
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 174/397 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP+ Y+ +ID L K ++ A ++M KP TY+ L G+C+ G+ + +
Sbjct: 353 GISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEIS 412
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + + GY +V +Y LI+GF + + +++ M+ PN T L+HG
Sbjct: 413 LSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHG 472
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KA E+ ++ CN + + EA ++ ++ D G +P
Sbjct: 473 FCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPN 532
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S T++ + L + +L +K V P Y L++ K +
Sbjct: 533 SYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYA 592
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K + ++ +Y M+I+ F + M A + +EM + + P+ + F +I+G CK
Sbjct: 593 KMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVG 652
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ L + + G P+ T+ +ID + R + A ++M V P+ +TY
Sbjct: 653 DMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYT 712
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
LI ++G R +F +M+ + + P+ + L
Sbjct: 713 ALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 164/345 (47%), Gaps = 9/345 (2%)
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT-------CLVTGLDLNE 203
L CN LL + + ++ ++ D G P + F YT+ +D+ +
Sbjct: 214 LSCNFLLNCFAEANQTEFIRSLFEELKDSG--PSPNVFTYTIMMNYYCKGSFGKNIDIVK 271
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
+L+ G P TY + L +AG R + + N YN VI
Sbjct: 272 ATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIH 331
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
FC+ + A E+ +MR I+P +++ LI G CK +V K +L+ +++ KP
Sbjct: 332 EFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKP 391
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
T++S+ D LC++ E +L + G + I+YN LI D+ + +L
Sbjct: 392 SLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLV 451
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+M+ + P+ +TFN LI FC+ +++KA + F ML +G++ + F+ + + +
Sbjct: 452 HEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNRE 511
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
G F EA + ++ G P+SYT N++++ L ++ + E+A +++
Sbjct: 512 GHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVL 556
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 163/356 (45%), Gaps = 5/356 (1%)
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
+V N L+ + N+M +AA + + G + ++ + C + +
Sbjct: 179 IVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEE 238
Query: 211 FIKRGVKPRFSTYLLLMEALYKA--GRD---VEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
G P TY ++M K G++ V+ L + + V +Y I
Sbjct: 239 LKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGL 298
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C+ ++ A + R++R R+ N +N +I C++ E+H+ ELL + G P
Sbjct: 299 CRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTA 358
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
++++ +ID LC+ + E ALD + EMV+ V P+ +TY+ L LC G SL +F
Sbjct: 359 YSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHN 418
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
+ A+ D+ ++N LI F + A K M G P++F+++ LI K R
Sbjct: 419 LGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQR 478
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
D+A + F M + G + +T N++ + ++G F EA ++ ++ GI S+
Sbjct: 479 LDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSY 534
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 105/213 (49%), Gaps = 5/213 (2%)
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+D + +++ N LI ++ + ++ V G + + + N +++C A++
Sbjct: 170 QDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQT 229
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLC--AIG---DVARSLRLFQKMQADRISPDIY 396
E E+ + G PN TY I++ C + G D+ ++ + ++M+ + SP +
Sbjct: 230 EFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVV 289
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
T+ A I CR +E A + + +++ Y+A+I ++G EA + M
Sbjct: 290 TYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDM 349
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+G +P +Y+ +++++ L ++G+ E+A D+++
Sbjct: 350 RSHGISPTAYSYSILIDGLCKKGQVEKALDLIE 382
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 62/121 (51%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI PS Y +I+ + + AY F++M PD + +I G C++G +
Sbjct: 597 VGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKS 656
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L ++M G +PNV TYT LIDG+ KR+ + + MK NV P+ T +L+
Sbjct: 657 AWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIF 716
Query: 124 G 124
G
Sbjct: 717 G 717
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 108/293 (36%), Gaps = 70/293 (23%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGI P++ YN VI L K + A+ M + P YN LI G + +
Sbjct: 527 LGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTK 586
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L +M +G P++ TYT+LI+ F N ++ E + + + M ++ + P+E ++
Sbjct: 587 ALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIA 646
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + D A+ A+ +M G P
Sbjct: 647 GFCKVGDMKSAW-----------------------------------ALYEEMSQWGKSP 671
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ TCL+ G +K R + D
Sbjct: 672 NVVTY----TCLIDG-------------------------------YFKIKRMDKADFLF 696
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
N + +D + + +Y +I + + DR E+ EM++ + PN + TL
Sbjct: 697 NKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/492 (23%), Positives = 235/492 (47%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P + ++ +LVKS FQ+M KP+ +NILI+ C++G++ A
Sbjct: 67 TPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFS 126
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++ ++ +GY P+ T I GFC ++ + + + ++ + +L++G+
Sbjct: 127 VLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLC 186
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + A ELL R + ++ +T++ + + ++A + +M R
Sbjct: 187 KVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIV 246
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ ++ L + G+ + + P T+ +L++A K GR E L +
Sbjct: 247 TYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMM 306
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K + ++ +YN ++D +C VN ++ A I M R + + ++N +I+G CK V
Sbjct: 307 MKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMV 366
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ +L + P+ T+NS+ID LC++ R AL+ + M + G P+ ITY+ +
Sbjct: 367 DQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSI 426
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ +LC V +++ L K++ I P++YT+ LI C+ ++E A F +L G
Sbjct: 427 LDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGY 486
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+Y+ +I+ G FDEA M+ N C PD+ T +I+ +L + ++A
Sbjct: 487 NLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEK 546
Query: 487 IVKTSKERGISF 498
+++ RG+ +
Sbjct: 547 LLREMITRGLLY 558
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 191/446 (42%), Gaps = 59/446 (13%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
IS + Y+A+I + A F +M+ + PD +T+NIL+ C+ G V EA
Sbjct: 241 ISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAK 300
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS---LV 122
+ M G P++ TY L+DG+C V +L M R V ATVRS ++
Sbjct: 301 NGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGV---TATVRSYNIVI 357
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G + +A +L ++ + N+L+ L + S A ++ M DRG
Sbjct: 358 NGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQ 417
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ T+ + L +++ +L +G++P TY +L++ L K GR +E R
Sbjct: 418 PDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGR-LEDAR- 475
Query: 243 LNHVFKDRLVSN----VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
++F+D LV VN+Y ++I FC + D A + +M+D P+ +T+ +I
Sbjct: 476 --NIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIIC 533
Query: 299 GHCKDAEVHK---------TRELLVMLLECG-------FKPDKFTFNSMIDC-------- 334
E K TR LL LE G P F N + C
Sbjct: 534 SLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGN 593
Query: 335 --------------LCRAHRFEDALDCLSEMV----EW---GVPPNTITYNILIRSLCAI 373
L +++ + ++C S ++ +W G + TY ++I+ C+
Sbjct: 594 WAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSH 653
Query: 374 GDVARSLRLFQKMQADRISPDIYTFN 399
G SL L KM+ + PD T++
Sbjct: 654 GLFDESLALLSKMEVNGCIPDAVTYD 679
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 152/343 (44%), Gaps = 4/343 (1%)
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
NN+ +A ++ + + P F + LV + + RG+KP F
Sbjct: 47 NNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFV 106
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+ +L+ + G L + K + + N I FC + +A ++
Sbjct: 107 NFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKL 166
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+ V++ TLI+G CK E ELL + + D ++++ID +C+
Sbjct: 167 VALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNV 226
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
DA D SEMV + N +TY+ LI C +G + ++ LF KM ++ I+PD+YTFN L
Sbjct: 227 NDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNIL 286
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
+ +FC+ ++++A+ M+ G++PD +Y++L+ + AK +M G
Sbjct: 287 VDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGV 346
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFPGL 504
+ N+++ + ++A + K + I FP +
Sbjct: 347 TATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQI----FPNV 385
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 166/380 (43%), Gaps = 57/380 (15%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G++ + R YN VI+ K +D A F++M Q P+ TYN LI G+C+ G
Sbjct: 341 MSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGR 400
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ AL L+ M G P++ TY+ ++D C V + +L +K++ + PN T
Sbjct: 401 ISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTI 460
Query: 121 LVHGV---FRCLDPHKAFE-LLIRFMEREPLTQKLVCNT---LLYRLSNNSMASEAAAIL 173
L+ G+ R D FE LL++ L NT ++ ++ + EA ++L
Sbjct: 461 LIDGLCKGGRLEDARNIFEDLLVK-------GYNLTVNTYTVMIQGFCSHGLFDEALSLL 513
Query: 174 RKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
KM D +P++ T++ + L + ++ +L I RG+ F Y + A
Sbjct: 514 SKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAA 573
Query: 234 GRDVEGDRYLNHVFKDRL--VSNVNSYNMV------IDCFCKVNMMDRATEICREMRDRD 285
+LN+ D L S+ S N I C C + MRD+D
Sbjct: 574 PA-----HFLNN---DSLQCTSSQESGNWAKLLLERIYCDCVLTK--------SNMRDKD 617
Query: 286 I-APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
+ P+++ ++T C ++ G+ D T+ MI C F+++
Sbjct: 618 VECPSVIIYST-----CDWSKQ-------------GYILDVNTYTVMIQGFCSHGLFDES 659
Query: 345 LDCLSEMVEWGVPPNTITYN 364
L LS+M G P+ +TY+
Sbjct: 660 LALLSKMEVNGCIPDAVTYD 679
>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g31840
gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 840
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 219/460 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ ++++ ID VKS + A + +++M P+ TY ILI G+C+ G + EA
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ Q+ G P++ TY+ LIDGFC + F + E M + P+ LV G
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A ++ + + +V N+L+ + EA + R MG G P+
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+TF + + L E + K G++P Y L++A K + G + +
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++++ +++ N+VI K + ++ A++ + + + P++VT+NT+I G+C
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 650
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + +L F P+ T +I LC+ + + A+ S M E G PN +TY
Sbjct: 651 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 710
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ D+ S +LF++MQ ISP I +++ +I C+ ++++A F +
Sbjct: 711 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 770
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
L PD +Y+ LI+ K GR EA + M +NG PD
Sbjct: 771 KLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 208/457 (45%), Gaps = 14/457 (3%)
Query: 14 NAVIDALVKSNSID---LAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
+ V D ++ + D L ++ + + D CK L+ CR G+VD+AL +
Sbjct: 119 DKVFDEMITNRGKDFNVLGSIRDRSLDADVCK-------FLMECCCRYGMVDKALEIFVY 171
Query: 71 MEGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
LG P Y +L + + RV + + + + P+ + V C
Sbjct: 172 STQLGVVIPQDSVYRML-NSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK 230
Query: 130 -DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+ KA + MER + CN +L LS + + A+ +L + D G P TF
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQI-EVASRLLSLVLDCGPAPNVVTF 289
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ +++ + +RG++P Y L++ +KAG G + +
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+ +V ++ ID + K + A+ + + M + I+PN+VT+ LI G C+D +++
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+ +L+ G +P T++S+ID C+ +M++ G PP+ + Y +L+
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
L G + ++R KM I ++ FN+LI +CR+N+ ++A K F M G++P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
D +++ +++ I GR +EA F M + G PD+
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDA 566
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 119/493 (24%), Positives = 226/493 (45%), Gaps = 4/493 (0%)
Query: 5 GISPS-TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQC-KPDRFTYNILIHGICRIGVVD 62
GI PS + V+DAL + A L F ++ +++ + + N ++ G+ + ++
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKA-LDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIE 268
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A RL+ + G APNV T+ LI+GFC + F + ++M++R + P+ +L+
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G F+ +L + + + +V ++ + + + A+ + ++M +G
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T+ + L + E G+ +KRG++P TY L++ K G G
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ K +V Y +++D K +M A +M + I N+V FN+LI G C+
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ ++ ++ G KPD TF +++ R E+AL M + G+ P+ +
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALA 568
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y LI + C L+LF MQ ++IS DI N +I + ++IE A K F +++
Sbjct: 569 YCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 628
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ PD +Y+ +I R DEA++ F ++ P++ T +++ L + +
Sbjct: 629 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 688
Query: 483 EAHDIVKTSKERG 495
A + E+G
Sbjct: 689 GAIRMFSIMAEKG 701
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/481 (22%), Positives = 211/481 (43%), Gaps = 37/481 (7%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P+ T+ LI+G C+ G +D A L K ME G P++ Y+ LIDG+ A + ++
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LS 161
+ V + S + + D A ++ + M + ++ +V T+L + L
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATA-SVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
+ EA + ++ RG P T+ + +L + + IK G P
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
Y +L++ L K G + R+ + + NV +N +ID +C++N D A ++ R M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR---- 337
I P++ TF T++ + + + L + + G +PD + ++ID C+
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP 582
Query: 338 -------------------------------AHRFEDALDCLSEMVEWGVPPNTITYNIL 366
HR EDA + ++E + P+ +TYN +
Sbjct: 583 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 642
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I C++ + + R+F+ ++ P+ T LI C+ N ++ A + F M G
Sbjct: 643 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 702
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+P+ +Y L+ KS + + + F M++ G +P + ++I++ L ++GR +EA +
Sbjct: 703 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 762
Query: 487 I 487
I
Sbjct: 763 I 763
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 8/227 (3%)
Query: 272 DRATEICREMRDRDIAPNLVTFNTLI--SGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
D ++CR I P+ V+ + + + CK EV K + +++E GF+ + N
Sbjct: 202 DHFDKLCRG----GIEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCN 256
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++ L + E A LS +++ G PN +T+ LI C G++ R+ LF+ M+
Sbjct: 257 KVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
I PD+ ++ LI + + + K F L G++ D +S+ I +KSG A
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ M G +P+ T ++++ L Q GR EA + +RG+
Sbjct: 376 SVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 118/286 (41%), Gaps = 35/286 (12%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P Y +IDA K + F M ++ D N++IH + + +++
Sbjct: 560 MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 619
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + + P++ TY +I G+C+ +R+ E R+ E++K PN T+ L+H
Sbjct: 620 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 679
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
++C NN M A + M ++G P
Sbjct: 680 ---------------------------VLCK-------NNDMDG-AIRMFSIMAEKGSKP 704
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ + +D+ + + + ++G+ P +Y ++++ L K GR E
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
+ +L+ +V +Y ++I +CKV + A + M + P+
Sbjct: 765 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 102/253 (40%), Gaps = 37/253 (14%)
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
+RDR + ++ F L+ C+ V K E+ V + G + + M++ L +
Sbjct: 138 SIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSD 195
Query: 340 RFEDALDCLSEMVEWGVPPNTIT-YNILIRSLCAIGDVARSL------------------ 380
R + D ++ G+ P+ ++ + ++ +L G+V ++L
Sbjct: 196 RVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSC 255
Query: 381 -RLFQKMQADRI---------------SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++ + + D+I +P++ TF LI FC+ ++++A F M
Sbjct: 256 NKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ PD +YS LI K+G + F G D + ++ V+ G A
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375
Query: 485 HDIVKTSKERGIS 497
+ K +GIS
Sbjct: 376 SVVYKRMLCQGIS 388
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 220/491 (44%), Gaps = 6/491 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ G SP YNA++D KS A Q+M + C P TYN LI R G+
Sbjct: 297 MKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGL 356
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++AL L QM G P+V+TYT L+ GF A + ++ E M+ PN T +
Sbjct: 357 LEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNA 416
Query: 121 LV--HG-VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
L+ HG + + K FE + F + + NTLL N M SE + + ++M
Sbjct: 417 LIKMHGNRGKFTEMMKVFEDIKTFQCSPDI---VTWNTLLSVFGQNGMDSEVSGVFKEMK 473
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
G++PE TF+ ++ ++ + ++ GV P S+Y ++ AL + G
Sbjct: 474 RAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWK 533
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ ++ L + R N +Y ++ + ++R + E+ I P V TL+
Sbjct: 534 QSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLV 593
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
+ K + +T + L + GF PD T N+M+ R A + L M G
Sbjct: 594 LVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFT 653
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P+ TYN L+ + RS + +++ A I PDI ++N +I ++CR ++ A +
Sbjct: 654 PSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRV 713
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
M G PD +Y+ I + F EA M ++GC P+ T N I++ +
Sbjct: 714 LSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCK 773
Query: 478 QGRFEEAHDIV 488
R +EA V
Sbjct: 774 LNRRDEASMFV 784
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/535 (22%), Positives = 231/535 (43%), Gaps = 51/535 (9%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV-VDEALRLVKQM 71
Y ++I A + A + F++M CKP TYN++++ ++G+ ++ + LV +M
Sbjct: 203 YTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRM 262
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
+ G AP+ YTY LI E VL+ MK P++ T +L+ +
Sbjct: 263 KSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRS 322
Query: 132 HKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A E+L + ME +V N+L+ + + + +A + +M ++G P+ +
Sbjct: 323 KEAMEVL-QEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDV----F 377
Query: 191 TVTCLVTGLDL----NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T T L++G + I + G KP T+ L++ G+ E + +
Sbjct: 378 TYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDI 437
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ ++ ++N ++ F + M + + +EM+ P TFNTLIS + +
Sbjct: 438 KTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSF 497
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ + +LE G PD ++N+++ L R ++ + L+EM + PN +TY L
Sbjct: 498 DQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSL 557
Query: 367 ---------IRSLCAIGD--------------------------VARSLRLFQKMQADRI 391
I +CA+ + + + R F +++
Sbjct: 558 LHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGF 617
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
SPDI T NA++ + R + KA + M G P +Y++L+ +S F+ +++
Sbjct: 618 SPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEE 677
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG-----ISFKSF 501
+ G PD + N ++ + GR +A ++ +E G I++ +F
Sbjct: 678 ILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTF 732
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 108/491 (21%), Positives = 212/491 (43%), Gaps = 17/491 (3%)
Query: 16 VIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLG 75
+I L K + A + D D + Y +I G EA+ + K+ME +G
Sbjct: 171 IISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVG 230
Query: 76 YAPNVYTYTILID-----GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
P + TY ++++ G K V V R MK + P+ T +L+ R
Sbjct: 231 CKPTLITYNVILNVYGKMGMPWNKMVGLVDR----MKSAGIAPDSYTYNTLISCCRRGNL 286
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A +L K+ N LL + + EA +L++M G P T++
Sbjct: 287 YEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNS 346
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
++ L + + + +++G+KP TY L+ KAG+D + + +
Sbjct: 347 LISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEG 406
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
N+ ++N +I ++ +++ +P++VT+NTL+S ++ +
Sbjct: 407 CKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVS 466
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+ + GF P++ TFN++I R F+ A+ M+E GV P+ +YN ++ +L
Sbjct: 467 GVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAAL 526
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK----AEKAFFSMLTLGL 426
G +S ++ +M+ R P+ T+ +L+ ++ +IE+ AE+ + + +
Sbjct: 527 ARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGI----I 582
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P L+ K E ++ FL + Q G +PD T N ++ ++ +A++
Sbjct: 583 EPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANE 642
Query: 487 IVKTSKERGIS 497
I+ K G +
Sbjct: 643 ILDCMKRGGFT 653
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 198/437 (45%), Gaps = 26/437 (5%)
Query: 78 PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEA--TVRSL---VHGVFRCLDPH 132
P LID N ++ E+ +LE+ +++ P E+ +V SL V G+ + L +
Sbjct: 86 PGQRILQTLIDPTFNLAQIDEL--LLELFEQQ---PGESDFSVESLSLDVLGIVKGLGFY 140
Query: 133 K-------AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
K FE + E E L + ++ L S AA++L + G+ +
Sbjct: 141 KKCDTALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNLCKDGFDVDV 200
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+ +T + E + + G KP TY +++ K G + ++ +
Sbjct: 201 YAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMG--MPWNKMVGL 258
Query: 246 VFKDRLVS-----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
V DR+ S + +YN +I C + N+ + A + +EM+ +P+ VT+N L+ +
Sbjct: 259 V--DRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVY 316
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K + E+L + G P T+NS+I R EDAL+ ++MVE G+ P+
Sbjct: 317 GKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDV 376
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
TY L+ G ++++F++M+ + P+I TFNALI+ K + K F
Sbjct: 377 FTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFED 436
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+ T PD +++ L+ ++G E F M++ G P+ T N ++ + + G
Sbjct: 437 IKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGS 496
Query: 481 FEEAHDIVKTSKERGIS 497
F++A + K E G++
Sbjct: 497 FDQAMAVYKRMLEAGVN 513
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 181/418 (43%), Gaps = 34/418 (8%)
Query: 50 ILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER 109
++I + + G V A L+ + G+ +VY YT +I F + R E V + M+E
Sbjct: 170 VIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEV 229
Query: 110 NVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEA 169
P T +++ + P K+V
Sbjct: 230 GCKPTLITYNVILNVYGKMGMPW----------------NKMV----------------- 256
Query: 170 AAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEA 229
++ +M G P+S T++ ++C G E G+L G P TY L++
Sbjct: 257 -GLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDV 315
Query: 230 LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
K+ R E L + + ++ +YN +I + + +++ A E+ +M ++ I P+
Sbjct: 316 YGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPD 375
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+ T+ TL+SG K + ++ + G KP+ TFN++I +F + +
Sbjct: 376 VFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFE 435
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
++ + P+ +T+N L+ G + +F++M+ P+ TFN LI S+ R
Sbjct: 436 DIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCG 495
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
++A + ML G+ PD SY+A++ AL + G + ++++ M+ C P+ T
Sbjct: 496 SFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELT 553
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 122/284 (42%), Gaps = 6/284 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P YNAV+ AL + + +M +CKP+ TY L+H ++
Sbjct: 511 GVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERM 570
Query: 65 LRLVKQMEGLGYAPN--VYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
L +++ P + +L++ C+ + E R +++R P+ T+ ++V
Sbjct: 571 CALAEEIYSGIIEPRAVLLKTLVLVNSKCDL--LMETERAFLELRQRGFSPDITTLNAMV 628
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
R KA E+L M+R T L N+L+Y S ++ + ILR++ +G
Sbjct: 629 SIYGRRQMVAKANEIL-DCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGI 687
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P+ +++ + + + +L + G P TY + + VE
Sbjct: 688 RPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAID 747
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
+ ++ K N ++YN ++D +CK+N D A+ +R D
Sbjct: 748 VVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLRKLD 791
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 223/482 (46%), Gaps = 35/482 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G + + + + +++A + A Q + C D N+++ IC G VDE
Sbjct: 138 GCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEG 197
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L++++ G P++ +Y ++ G C AKR +V ++ M PN AT
Sbjct: 198 VELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATF------ 251
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
NTL+ L N + + L +M + G P+
Sbjct: 252 -----------------------------NTLIAYLCRNGLFEQVHEALSQMPEHGCTPD 282
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + IL G+KP Y +++ L A R E + L
Sbjct: 283 LRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLA 342
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+F++ + ++N+++D FC+ ++DR E+ +M + P+++T+ T+I+G CK+
Sbjct: 343 EMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEG 402
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V + LL + CG KP+ ++ ++ LCRA R+ DA + +S M++ G PN +T+N
Sbjct: 403 LVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFN 462
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI +C G V +++ L ++M + SPD+ +++ +I + K E+A + M+
Sbjct: 463 TLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINK 522
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ P+ YS++ AL + GR D+ Q F S++ D+ N ++ +L ++ + A
Sbjct: 523 GITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRA 582
Query: 485 HD 486
D
Sbjct: 583 ID 584
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 206/440 (46%), Gaps = 6/440 (1%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N V+ A+ + +D +++ C+PD +YN ++ G+C D+ L+ +M
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR 241
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
+G PNV T+ LI C +V L M E P+ +++ G+ C D H
Sbjct: 242 VGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGI--CKDGHH 299
Query: 134 --AFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
A ++L R M L +VC NT+L L + EA +L +M + TF+
Sbjct: 300 EVANDILSR-MPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNI 358
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
V ++ +L+ ++ G P TY ++ K G E L ++
Sbjct: 359 LVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACG 418
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
N SY +V+ C+ A E+ M + PN VTFNTLI+ CK V +
Sbjct: 419 CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAI 478
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
ELL +L G PD +++++ID L +A + E+AL+ L+ M+ G+ PNTI Y+ + +L
Sbjct: 479 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASAL 538
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
G + +++F +Q + D +NA+I S C+ + ++A F M++ G P+
Sbjct: 539 SREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 598
Query: 431 FSYSALIKALIKSGRFDEAK 450
+Y+ LI+ L G EA+
Sbjct: 599 STYTILIRGLASEGLVREAQ 618
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 205/456 (44%), Gaps = 24/456 (5%)
Query: 51 LIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
LI +C G +A R ++ G A V Y +I G+C R +V +
Sbjct: 50 LIRSLCAAGRTADAAR---ALDTAGDAAGVVAYNAMIAGYC---RAGQVAAARRLAAAVP 103
Query: 111 VCPNEAT---------VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
V PN T R L+ LD E+ +R P +C+ +L
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLD-----EMPLRGCAATPP----MCHVILEAAC 154
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
A L+ + +G +S + V+ + ++E +L G +P
Sbjct: 155 RGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIV 214
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+Y +++ L A R + + + + + NV ++N +I C+ + ++ E +M
Sbjct: 215 SYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQM 274
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+ P+L + T+I G CKD ++L + G KP+ +N+++ LC A R+
Sbjct: 275 PEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERW 334
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
E+A D L+EM + P + +T+NIL+ C G V R + L ++M PD+ T+ +
Sbjct: 335 EEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTV 394
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I FC+ +++A +M G +P+ SY+ ++K L ++ R+ +A++ M Q GC
Sbjct: 395 INGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGC 454
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
P+ T N ++ + ++G E+A +++K G S
Sbjct: 455 LPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCS 490
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 196/451 (43%), Gaps = 3/451 (0%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
YN +I G CR G V A RL + PN YTY ++ C +A+ VL+ M
Sbjct: 78 AYNAMIAGYCRAGQVAAARRLAAAVP---VPPNAYTYFPIVRSLCARGLIADALTVLDEM 134
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
R ++ R A L + CN ++ +
Sbjct: 135 PLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCV 194
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
E +LRK+ G P+ +++ + L ++ ++ ++ G P +T+ L
Sbjct: 195 DEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTL 254
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ L + G + L+ + + ++ Y +ID CK + A +I M +
Sbjct: 255 IAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGL 314
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN+V +NT++ G C + +LL + + D TFN ++D C+ + ++
Sbjct: 315 KPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIE 374
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L +M+E G P+ ITY +I C G V ++ L + M A P+ ++ +++ C
Sbjct: 375 LLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLC 434
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R + A++ M+ G P+ +++ LI + K G ++A + M NGC+PD
Sbjct: 435 RAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLI 494
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ + +++ L + G+ EEA +++ +GI+
Sbjct: 495 SYSTVIDGLGKAGKTEEALELLNVMINKGIT 525
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 179/421 (42%), Gaps = 35/421 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YNAV+ L + D +M C P+ T+N LI +CR G+ ++
Sbjct: 208 GCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQV 267
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ QM G P++ Y +IDG C +L M + PN +++ G
Sbjct: 268 HEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKG 327
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +LL + + + N L+ N + +L +M + G +P+
Sbjct: 328 LCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPD 387
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + ++E +L G KP +Y ++++ L +A R V+ ++
Sbjct: 388 VITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELIS 447
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
H+ + + N ++N +I+ CK ++++A E+ ++M +P+L++++T+I G K
Sbjct: 448 HMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 507
Query: 305 EVHKTRELLVMLLECGFKP-----------------------------------DKFTFN 329
+ + ELL +++ G P D +N
Sbjct: 508 KTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYN 567
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++I LC+ + A+D + MV G PN TY ILIR L + G V + L ++ +
Sbjct: 568 AVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 627
Query: 390 R 390
R
Sbjct: 628 R 628
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 101/248 (40%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y VI+ K +D A + + MS CKP+ +Y I++ G+CR +A
Sbjct: 383 GCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDA 442
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G PN T+ LI+ C V + +L+ M P+ + +++ G
Sbjct: 443 QELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 502
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A ELL + + ++ +++ LS + + + D +
Sbjct: 503 LGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSD 562
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ ++ ++ L + + + G P STY +L+ L G E L+
Sbjct: 563 AALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLS 622
Query: 245 HVFKDRLV 252
+ R V
Sbjct: 623 ELCSRRAV 630
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 4/199 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G P+T Y V+ L ++ A M C P+ T+N LI+ +C+ G+
Sbjct: 414 MSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGL 473
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V++A+ L+KQM G +P++ +Y+ +IDG A + E +L +M + + PN S
Sbjct: 474 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSS 533
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + R K ++ + + + N ++ L A M G
Sbjct: 534 MASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNG 593
Query: 181 YLPESSTFDYTVTCLVTGL 199
+P ST+ T L+ GL
Sbjct: 594 CMPNESTY----TILIRGL 608
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LIRSLCA G A + R + + +NA+I +CR ++ A + +
Sbjct: 50 LIRSLCAAGRTADAARALDTAGD---AAGVVAYNAMIAGYCRAGQVAAARR---LAAAVP 103
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ P+ ++Y ++++L G +A M GC ++ILE + G F A
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163
Query: 486 DIVKTSKERGISFKS 500
++ +G + S
Sbjct: 164 RALQVLHAKGCTLDS 178
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 142/540 (26%), Positives = 232/540 (42%), Gaps = 83/540 (15%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ L++ +I L + ID A +F+ M ++C P+ TYN +++G+C+ +DEA
Sbjct: 141 GVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG-EECSPNVITYNTVVNGLCKANRIDEA 199
Query: 65 LRLVKQME-----GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
L L ME G P+V +Y+ +ID C A+RV + + + M+ PN T
Sbjct: 200 LELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYS 259
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
SL+ G+ + P + ELL+ E+ + N +L+ L N +A
Sbjct: 260 SLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKA---------- 309
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
C + +K G KP TY + + L KAGR E
Sbjct: 310 -------------------------CQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEA 344
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
R L + + ++ +V +Y+ +ID FCK MD+A ++ M + P+ VTF TL+ G
Sbjct: 345 YRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHG 404
Query: 300 ---HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
H K E + E +V GF P T+N ++DC+C A E AL+ +M
Sbjct: 405 FSEHKKSREAFRVHEDMV---NAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKR 461
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
P+ TY LI+ LC V + M+AD + P+ +AL++ C+ ++++A
Sbjct: 462 QPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACS 521
Query: 417 AFFSMLTLGLRP--------------------------------DNFSYSALIKALIKSG 444
+++ +G +P D +YS + + K+G
Sbjct: 522 VLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAG 581
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFPGL 504
+ DEA + M G PD T +L +L R E A + RG + PGL
Sbjct: 582 KPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCA----PGL 637
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 215/479 (44%), Gaps = 40/479 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y+ VIDAL K+ +D AY F++M C P+ TY+ LI G+C++ E
Sbjct: 215 GCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSEC 274
Query: 65 LRLVKQMEGLGYA-----------------------------------PNVYTYTILIDG 89
L L+ M+ G+ PNV TY + + G
Sbjct: 275 LELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHG 334
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C A RV E +R+L M E V P+ T S++ G + KA ++ R M E +
Sbjct: 335 LCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPH 394
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ TLL+ S + + EA + M + G++P T++ + C+ + I
Sbjct: 395 PVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYH 454
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
++ +P +TY L++ L +A R E +L+ + D +V N + +++ CK
Sbjct: 455 KMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQG 514
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC-GFKPDKFTF 328
+D A + + + P TF L+ ++ + K E LL GF D T+
Sbjct: 515 EVDEACSVLDNVVEVGCQPLGETFKILV----EELYLRKKWEAASKLLRSPGFVADAATY 570
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+ + +C+A + ++A++ + +MV GV P+ TY ++RSLC + V ++ F+KM +
Sbjct: 571 SLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMAS 630
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+P + T+ LI C + ++A + F +M+ G P + L L +G D
Sbjct: 631 RGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQD 689
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 188/420 (44%), Gaps = 31/420 (7%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
G+ N YT +L++ F AKR E R+L+ E PNE ++++G + +A
Sbjct: 71 GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
FELL ER L+ +TL+ L EA + MG+ P T++ V
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECS-PNVITYNTVVNG 189
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
L ++E + D KR Y+A E D
Sbjct: 190 LCKANRIDEALELFDDMEKR----------------YEASHGCEPD-------------- 219
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
V SY+ VID CK +D+A E + MR APN+VT+++LI G CK + ELL+
Sbjct: 220 VISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLL 279
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
+ E GF + FN+M+ L + E A +++ G PN +TYN+ + LC G
Sbjct: 280 HMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAG 339
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
V + R+ +M +++PD+ T++++I FC+ +++KA+ F M+ P ++
Sbjct: 340 RVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFM 399
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
L+ + + EA + M G P T N++++ + E A +I K +
Sbjct: 400 TLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRK 459
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 160/348 (45%), Gaps = 46/348 (13%)
Query: 186 STFDYTVTCLVTG--LDLNETCGILDTFIK-RGVKPRFS----TYLLLMEALYKAGRDVE 238
+ + TVT V G L E + TF + G KP F T +L+ A KA R E
Sbjct: 35 AGYASTVTPEVAGRVLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEE 94
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI------------ 286
R L + N Y VI+ FCK +D+A E+ EM++R +
Sbjct: 95 AHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQ 154
Query: 287 ----------------------APNLVTFNTLISGHCKDAEVHKTRELLVML-----LEC 319
+PN++T+NT+++G CK + + EL +
Sbjct: 155 GLCRKGRIDEALEQFKSMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASH 214
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G +PD +++++ID LC+A R + A + M G PN +TY+ LI LC + +
Sbjct: 215 GCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSEC 274
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
L L M+ +I FNA++ + + ++ EKA + F +L G +P+ +Y+ +
Sbjct: 275 LELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHG 334
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
L K+GR DEA + L M ++ PD T + I++ + GR ++A D+
Sbjct: 335 LCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDV 382
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 228/495 (46%), Gaps = 5/495 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ YNA+ID L K+ D A F++M+ +P+ TY ILIH +C+ G++++
Sbjct: 332 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 391
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L +M G VY Y LI+G+C + +L M + + P A+ L+
Sbjct: 392 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIA 451
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R D EL ER L+ + EAA + KM D +P
Sbjct: 452 GLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 511
Query: 184 ESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
TF+ + CLV ++ + + D ++ G+KP TY L+ L + +
Sbjct: 512 NEVTFNVMIEGYCLVG--NIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 569
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
++ + V N S ++ F + + EM R + +LV+F ++
Sbjct: 570 FVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 629
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + K+ L + E G KPD + MID L + AL+C +MV G PNT+
Sbjct: 630 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTV 689
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
T+ +LI +LC G + + L ++M A + P+ +T+N + F +EKA+ +M
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
L G S++ LIK L K+G+ EA + ++G +PD + + I+ L + G
Sbjct: 750 LQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 808
Query: 482 EEAHDIVKTSKERGI 496
+A ++ +G+
Sbjct: 809 NKAFELWNEMLYKGL 823
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 229/493 (46%), Gaps = 2/493 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ + + ++ +LVK LA F +M D + Y I C +D A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LV +ME G + Y +L+ G C RV E V +M V +E T R+LV+G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + A + + + + C+ ++ L + EA ++ K+GD G +P
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + L ++ + RG++P TY +L+ AL K G +E L
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM-IEDALCLF 396
Query: 245 HVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+D+ + V YN +I+ +CK +DRA + M + P +++ LI+G C++
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 456
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ EL + E G + +TF ++I+ C+ + ++A +M++ V PN +T+
Sbjct: 457 GDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 516
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N++I C +G++ ++ +L+ +M + PD YT+ +LI C + + KA + +
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+NFS +AL+ + GRF E + M G D + +I+ ++Q E+
Sbjct: 577 SYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 636
Query: 484 AHDIVKTSKERGI 496
+ + + KE+G+
Sbjct: 637 SCVLFREMKEQGV 649
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 220/476 (46%), Gaps = 11/476 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + YN++I+ K S+D A M + P +Y+ LI G+CR G +
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSC 462
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L ++M G A N YT+T LI+GFC K++ E R+ + M + NV PNE T ++ G
Sbjct: 463 MELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 522
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KAF+L + +E +L+ L S S+A + + + Y
Sbjct: 523 YCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADL-ENSY--- 578
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ ++++T L+ G ET + D RGVK ++ +++ A K D E
Sbjct: 579 AVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQ-HDKEKS 637
Query: 241 RYLNHVFKDRLVSNVNS-YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L K++ V + Y +ID K M +A +M +PN VT LI+
Sbjct: 638 CVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINN 697
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK + L +L P+KFT+N +D E A D S M++ G +
Sbjct: 698 LCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLAS 756
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+++NILI+ LC G + ++ L K+ SPD +++ +I C+M I KA + +
Sbjct: 757 IVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWN 816
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
ML GL+PD +Y+ I+ G D+A + +M ++G P+ T +L +
Sbjct: 817 EMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/520 (23%), Positives = 216/520 (41%), Gaps = 35/520 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ +Y A I A +S ++D A +M + K YN+L++G+C+ V EA
Sbjct: 193 GVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEA 252
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + M +G + TY L+ GFC + + R+ M P+EA ++
Sbjct: 253 VEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDE 312
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF L + + + N L+ +L N +A + ++M RG P
Sbjct: 313 LRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPN 372
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L + + + D +G+K Y L+ K G L+
Sbjct: 373 EVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 432
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K+ L SY+ +I C+ + E+ REM +R IA N TF LI+G CKD
Sbjct: 433 GMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDK 492
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + L +++ P++ TFN MI+ C A +MVE G+ P+ TY
Sbjct: 493 KMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYR 552
Query: 365 ILIRSLCAIGDVAR-----------------------------------SLRLFQKMQAD 389
LI LC V++ + L+ +M
Sbjct: 553 SLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVR 612
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ D+ +F ++ + + + EK+ F M G++PD+ Y+ +I AL K +A
Sbjct: 613 GVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQA 672
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+ M +G +P++ T +++ L + G A + K
Sbjct: 673 LNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCK 712
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 135/296 (45%), Gaps = 2/296 (0%)
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV-SNVNSYNMVIDCF 265
+ D ++ GV Y + A Y R+++G R L + V ++ YN+++
Sbjct: 185 LFDKMLQSGVHLDEYVYTAGIRA-YCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGL 243
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
CK + A E+ M + + + VT+ TL+ G C+ E+ + ++ GF P +
Sbjct: 244 CKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSE 303
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
+ MID L + E+A ++ + G+ PN YN LI LC + RLF++
Sbjct: 304 ANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKE 363
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M + P+ T+ LI + C+ IE A F M G++ + Y++LI K G
Sbjct: 364 MAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGS 423
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
D A+ M + G P + + + ++ L + G ++ + ERGI++ ++
Sbjct: 424 LDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNY 479
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 116/250 (46%), Gaps = 2/250 (0%)
Query: 255 VNSY--NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
VN Y + ++ K+ A ++ +M + + + I +C+ + R L
Sbjct: 161 VNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGL 220
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+V + G K +N ++ LC+ R ++A++ + MV GV + +TY L+ C
Sbjct: 221 VVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR 280
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
+ ++ +LR+ M P + +I + +E+A + LG+ P+ F+
Sbjct: 281 MEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFA 340
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y+ALI L K+ RFD+A + F M G P+ T +++ L ++G E+A + +
Sbjct: 341 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400
Query: 493 ERGISFKSFP 502
++GI +P
Sbjct: 401 DKGIKVTVYP 410
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/502 (26%), Positives = 227/502 (45%), Gaps = 47/502 (9%)
Query: 24 NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTY 83
N ID A F + Q P +N +I + ++ A+ L+KQM G P+++T
Sbjct: 63 NGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTL 122
Query: 84 TILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME 143
+I I+ +C+ + F VL I+ +R PN T+ +++ G+ + KA +
Sbjct: 123 SIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAA 182
Query: 144 REPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
+ L ++ TL+ L + +A +L++M + P ++ +
Sbjct: 183 QGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKD---EL 239
Query: 204 TCGILDTFIK---RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
TC D ++K G+ P TY L+ + G+ E + + + + NV ++N+
Sbjct: 240 TCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNV 299
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
+ID FC+ M A + M R P++VTFNTLISGHC V + R+L + E G
Sbjct: 300 LIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERG 359
Query: 321 FKPDKFT-----------------------------------FNSMIDCLCRAHRFEDAL 345
PD ++ ++S+ID LC++ R A
Sbjct: 360 ILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAW 419
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+ S + G PPN ITYNILI + C I D+ + LF+ M ++P + T+N LI +
Sbjct: 420 ELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGY 479
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
C+ +I +A M + L PD+ +Y++L L KSGR +A + F M G D
Sbjct: 480 CKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDV 539
Query: 466 YTSNLILETLVQQGRFEEAHDI 487
T N++L+ F +A D+
Sbjct: 540 ATYNVLLDA------FCKAQDV 555
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 201/471 (42%), Gaps = 35/471 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N +I ++VK +A +QM P FT +I I+ C +G + A +
Sbjct: 82 PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 141
Query: 68 VKQMEGLGYAPNVYT-----------------------------------YTILIDGFCN 92
+ + GY PN T Y LI+G C
Sbjct: 142 LGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCK 201
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
R + F++L+ M+ + V PN ++ + KA +L ++ ++ L
Sbjct: 202 IGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILT 261
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
+L+ E ++ +M ++ P TF+ + + E G+ + +
Sbjct: 262 YTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMV 321
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
KRG +P T+ L+ G +E + + VF+ ++ +V SY ++I +CK +D
Sbjct: 322 KRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRID 381
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + EMR +++ ++V +++LI G CK + EL + G P+ T+N +I
Sbjct: 382 EAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILI 441
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
D C+ + ++ M G+ P +TYNILI C + ++ L MQ+ ++
Sbjct: 442 DAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLA 501
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
PD T+N+L C+ +I A + F M G D +Y+ L+ A K+
Sbjct: 502 PDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKA 552
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 183/407 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ V+ L + + A ++ D Y LI+G+C+IG +A
Sbjct: 149 GYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDA 208
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L+++MEG PN+ Y ++ID FC + + + + + + P+ T SL+ G
Sbjct: 209 FQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRG 268
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + +L+ + + N L+ EA + M RG P+
Sbjct: 269 FCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPD 328
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ ++ ++ E + DT +RG+ P +Y +L+ K R E N
Sbjct: 329 IVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFN 388
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +V ++ Y+ +ID CK + A E+ + + PN++T+N LI CK
Sbjct: 389 EMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQ 448
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ EL ++ G P T+N +I+ C++ R +A++ LS M + P++ITYN
Sbjct: 449 DIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYN 508
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
L LC G ++ + LF+ M D+ T+N L+ +FC+ +
Sbjct: 509 SLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 170/376 (45%), Gaps = 43/376 (11%)
Query: 6 ISPSTRLYNAVIDALVKS----NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
+ P+ +YN +ID+ K + DL YLK M +D PD TY LI G CR G
Sbjct: 220 VKPNIVIYNMIIDSFCKDELTCKARDL-YLKIVDMGID---PDILTYTSLIRGFCRTGQW 275
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
E +L+ +M PNVYT+ +LID FC ++ E + +M +R P+ T +L
Sbjct: 276 GEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTL 335
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ G CL N L EA + + +RG
Sbjct: 336 ISG--HCLHG----------------------NVL-----------EARKLFDTVFERGI 360
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
LP+ ++ + ++E + + + + Y L++ L K+GR
Sbjct: 361 LPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWE 420
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + D NV +YN++ID FCK+ +D E+ + M + + P ++T+N LI+G+C
Sbjct: 421 LFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYC 480
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + + LL ++ PD T+NS+ D LC++ R DA + M G P +
Sbjct: 481 KSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVA 540
Query: 362 TYNILIRSLCAIGDVA 377
TYN+L+ + C DVA
Sbjct: 541 TYNVLLDAFCKAQDVA 556
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 173/385 (44%), Gaps = 7/385 (1%)
Query: 112 CPNE-ATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA 170
CP + A + S +G+ A L + +PL + NT++ + A
Sbjct: 51 CPKQNAKILSSFNGI------DDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAI 104
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
++L++M +G P T + C ++ +L +KRG +P T +M+ L
Sbjct: 105 SLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGL 164
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
G + + ++V ++ + Y +I+ CK+ A ++ +EM + + PN+
Sbjct: 165 CINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNI 224
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
V +N +I CKD K R+L + +++ G PD T+ S+I CR ++ + + E
Sbjct: 225 VIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCE 284
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
MV + PN T+N+LI + C G + + +F M PDI TFN LI C
Sbjct: 285 MVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGN 344
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+ +A K F ++ G+ PD +SY+ LI K R DEA F M D +
Sbjct: 345 VLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSS 404
Query: 471 ILETLVQQGRFEEAHDIVKTSKERG 495
+++ L + GR A ++ T G
Sbjct: 405 LIDGLCKSGRISYAWELFSTINNDG 429
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 123/251 (49%), Gaps = 1/251 (0%)
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
VFK + ++ + ++ I+C+C + M A + + R PN +T T++ G C + E
Sbjct: 111 VFKG-VTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGE 169
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V K + + G D+ + ++I+ LC+ R DA L EM V PN + YN+
Sbjct: 170 VQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNM 229
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+I S C ++ L+ K+ I PDI T+ +LI+ FCR + + ++ M+
Sbjct: 230 IIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKN 289
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ P+ ++++ LI A + G+ EA+ F M + G PD T N ++ G EA
Sbjct: 290 INPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEAR 349
Query: 486 DIVKTSKERGI 496
+ T ERGI
Sbjct: 350 KLFDTVFERGI 360
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ YN +I+ KS I A M PD TYN L G+C+ G + +A
Sbjct: 464 GLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDA 523
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVA 97
L K M G +V TY +L+D FC A+ VA
Sbjct: 524 WELFKVMHVGGPPVDVATYNVLLDAFCKAQDVA 556
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 209/443 (47%), Gaps = 38/443 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ S N ++ LVK I +++M + +P ++NI+I+G+C++G +++A
Sbjct: 123 GLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKA 182
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE---RNVCPNEATVRSL 121
+++ M+ G + NV TY LIDG+C ++ ++++ I+KE +CPNE T L
Sbjct: 183 GDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNIL 242
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ G C D + S A + +M +G
Sbjct: 243 IDGF--CKDKN---------------------------------VSAAMKVFAEMNRQGV 267
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P T++ + L +NE + D + +KP T+ L+ K +
Sbjct: 268 KPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGE 327
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + K + NV +YN++ID +CK M+ A + R M + + P++ T+N LI+G C
Sbjct: 328 LFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLC 387
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ ++ R L+ + K D T+N +ID LC + AL L EM G+ P+ +
Sbjct: 388 RKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQL 447
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN +I C G++ +L L +M+ ++ T+N LI+ FC+ +K+E A M
Sbjct: 448 TYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEM 507
Query: 422 LTLGLRPDNFSYSALIKALIKSG 444
L GL P+ +Y + + +++ G
Sbjct: 508 LEKGLIPNRMTYEIVTEEMMEKG 530
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 202/445 (45%), Gaps = 39/445 (8%)
Query: 35 QMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAK 94
++SV C P L+ G+ ++G + + + K+M P + ++ I+I+G C
Sbjct: 125 KLSVTSCNP-------LMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVG 177
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCN 154
++ + ++E MK R V N T +L+ G + K +
Sbjct: 178 KLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMY------------------- 218
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
+A AIL++M G P TF+ + +++ + ++
Sbjct: 219 -------------KADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQ 265
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
GVKP TY L+ L G+ E + + L N+ ++N +++ FCK M+ +A
Sbjct: 266 GVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQA 325
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
E+ +M + I PN+ T+N LI +CKD + L ++L G PD T+N +I
Sbjct: 326 GELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAG 385
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LCR E A + +SEM + + ITYNILI SLC G++ ++LRL +M + P
Sbjct: 386 LCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPS 445
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
T+N +I +C+ + A M +G + +Y+ LIK K + ++A
Sbjct: 446 QLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLN 505
Query: 455 SMEQNGCNPDSYTSNLILETLVQQG 479
M + G P+ T ++ E ++++G
Sbjct: 506 EMLEKGLIPNRMTYEIVTEEMMEKG 530
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 173/379 (45%), Gaps = 3/379 (0%)
Query: 112 CPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAA 171
C N V LV + L FE R + CN L+ L +
Sbjct: 90 CANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEF 149
Query: 172 ILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEA-- 229
+ ++M R P +F+ + L LN+ I++ RGV TY L++
Sbjct: 150 VYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYC 209
Query: 230 -LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
+ K G+ + D L + D + N ++N++ID FCK + A ++ EM + + P
Sbjct: 210 KMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKP 269
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
N+VT+N+LI+G C + +V++ L ++ KP+ T N++++ C+ + A +
Sbjct: 270 NVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELF 329
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
+M + G+ PN TYNILI + C ++ + L++ M + PD+ T+N LI CR
Sbjct: 330 DDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRK 389
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+E A M T L+ D +Y+ LI +L G +A + M + G P T
Sbjct: 390 GDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTY 449
Query: 469 NLILETLVQQGRFEEAHDI 487
N +++ ++G A ++
Sbjct: 450 NTMIDGYCKEGNLRAALNL 468
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 3/225 (1%)
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
E + D + ++ + N L+SG K E+ + ++ +P +FN +I+ L
Sbjct: 114 EAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGL 173
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR---LFQKMQADRIS 392
C+ + A D + +M GV N ITYN LI C +G + + + + ++M+AD I
Sbjct: 174 CKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGIC 233
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
P+ TFN LI FC+ + A K F M G++P+ +Y++LI L +G+ +EA
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL 293
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M + P+ T N +L + ++A ++ ++GI+
Sbjct: 294 RDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGIT 338
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 234/497 (47%), Gaps = 3/497 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS Y +++A+ KS+ A +M C P+ TYN++I+G+CR G VD+A
Sbjct: 171 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 230
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ ++ G+ P++ +YT ++ G C A+R +V + M ++ PNE T LV
Sbjct: 231 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 290
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R +A ++L + + +CN ++ + +A L MG G P+
Sbjct: 291 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 350
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ + L +L +++ P T+ + L + G + + +
Sbjct: 351 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIE 410
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + +YN ++ FC +D A E+ + PN +T+ TL++G C
Sbjct: 411 LMPEYGCSVGIVTYNALVHGFCVQGRVDSALEL---FNNLPCEPNTITYTTLLTGLCHAE 467
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ ELL +++ + TFN ++ C+ E+A++ +++M+E G PN IT+N
Sbjct: 468 RLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFN 527
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ + + +L L + + +S D T+++++ R ++ E+A + ++ +
Sbjct: 528 TLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDM 587
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+RP Y+ ++ AL K D+A F M NGC P+ T +++E L +G +EA
Sbjct: 588 GMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEA 647
Query: 485 HDIVKTSKERGISFKSF 501
++ +G+ KS
Sbjct: 648 RYVLSELYAKGVLSKSL 664
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 212/455 (46%), Gaps = 6/455 (1%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
PD + LI +CR G +A R+++ E G +V+ Y L+ G+C R+ R+
Sbjct: 72 PDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRL 131
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
+ M V P+ T ++ G+ A LL ++R + LL +
Sbjct: 132 IASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCK 188
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+S EA +L +M +G P T++ + + +++ IL+ G +P +
Sbjct: 189 SSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVS 248
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y +++ L A R + + + V N +++M++ FC+ M++RA ++ ++M
Sbjct: 249 YTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMS 308
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
PN N +I+ CK V + L + G PD ++ +++ LCRA R+E
Sbjct: 309 QHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWE 368
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
A + L EMV PPN +T+N I LC G + ++++L + M S I T+NAL+
Sbjct: 369 HAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALV 428
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
FC +++ A + F + L P+ +Y+ L+ L + R D A + M Q C
Sbjct: 429 HGFCVQGRVDSALELFNN---LPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCP 485
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
++ T N+++ Q+G EEA ++V E G +
Sbjct: 486 LNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCT 520
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 190/427 (44%), Gaps = 5/427 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G P Y V+ L + D + F +M +C P+ T+++L+ CR G+
Sbjct: 237 LSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGM 296
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V+ A+++++QM G PN I+I+ C RV + + L M P+ + +
Sbjct: 297 VERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTT 356
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ R A ELL + + ++ NT + L + +A ++ M + G
Sbjct: 357 VLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYG 416
Query: 181 YLPESSTFDYTVTCLVTGLDLNETC-GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
S T LV G + L+ F +P TY L+ L A R
Sbjct: 417 ----CSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAA 472
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L + + N ++N+++ FC+ ++ A E+ +M + PNL+TFNTL+ G
Sbjct: 473 AELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDG 532
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
KD + ELL L+ G D T++S++D L R R E+A+ L + + G+ P
Sbjct: 533 ITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPK 592
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
YN ++ +LC + +++ F M ++ P+ T+ LI+ +++A
Sbjct: 593 VGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLS 652
Query: 420 SMLTLGL 426
+ G+
Sbjct: 653 ELYAKGV 659
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 138/289 (47%), Gaps = 3/289 (1%)
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
DL E +++T RG P L+ L + GR + R L +V +YN
Sbjct: 54 DLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYN 113
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
++ +C+ +D A + M + P+ T+ +I G C V LL +L+
Sbjct: 114 TLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQR 170
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G +P T+ +++ +C++ F +A++ L EM G PN +TYN++I +C G V +
Sbjct: 171 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 230
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+ ++ + PDI ++ +++ C + + + F M+ P+ ++ L++
Sbjct: 231 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 290
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+ G + A Q M Q+GC P++ N+++ + +QGR ++A+D +
Sbjct: 291 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFL 339
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+R L A D+A + RL + + +PD+Y LI++ CR + A + + G
Sbjct: 46 LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
D F+Y+ L+ + GR D A++ SM PD+YT I+ L +GR +A
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALA 162
Query: 487 IVKTSKERG 495
++ +RG
Sbjct: 163 LLDDMLQRG 171
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/494 (24%), Positives = 217/494 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T +YN+++ K+ A ++M + C PD TYN L R G +DE
Sbjct: 317 GYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEG 376
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ M G PN TYT +ID + A R + R+ MK+ PN T S++
Sbjct: 377 MAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAM 436
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + ++L + NT+L S + +LR+M + G+ P+
Sbjct: 437 LGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPD 496
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ ++ ++ + +K G P +TY L+ AL G + +
Sbjct: 497 KDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQ 556
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ N SY++++ C+ K + ++ +E+ D + P+ + TL+ + K
Sbjct: 557 DMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCR 616
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ L + G+KPD NSM+ R F A + L + E G+ PN TYN
Sbjct: 617 HLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYN 676
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ + ++ + + +Q PD+ ++N +I+ FCR +++A + M T
Sbjct: 677 CLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTK 736
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G++P +Y+ + FDEA + M ++ C P T ++++ + G+ EEA
Sbjct: 737 GIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKHEEA 796
Query: 485 HDIVKTSKERGISF 498
D V KE ISF
Sbjct: 797 MDFVTKIKEIDISF 810
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/528 (23%), Positives = 242/528 (45%), Gaps = 44/528 (8%)
Query: 4 LGISPSTRLYNAVIDALVK----SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
G + RL N V++ +V+ + +A F + V++ D Y ++H R G
Sbjct: 171 FGSDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSG 230
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR-VAEVFRVLEIMKERNVCPNEATV 118
A+ L +MEG+G P + TY +++D + R + +L+ M+ + + +E T
Sbjct: 231 KYKRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTC 290
Query: 119 RSLVHGVFR--CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
+++ R LD + F ++ +P T ++ N++L + +EA +IL++M
Sbjct: 291 STVISACGREGMLDEARKFLAELKLNGYKPGT--VMYNSMLQVFGKAGIYTEALSILKEM 348
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
D P+S T++ V L+E ++DT +GV P TY +++A KAGR+
Sbjct: 349 EDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGRE 408
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
+ R + + NV +YN V+ K + + ++ EM+ APN T+NT+
Sbjct: 409 DDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTM 468
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
++ ++ + + ++L + CGF+PDK TFN++I R D+ EMV+ G
Sbjct: 469 LAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGF 528
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR------MNK 410
P TYN L+ +L GD + + Q MQ P+ +++ L+ + + + K
Sbjct: 529 TPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEK 588
Query: 411 IEKA-----------------------------EKAFFSMLTLGLRPDNFSYSALIKALI 441
+EK E+AF + G +PD ++++
Sbjct: 589 VEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFS 648
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
++ F +A++ + + G P+ +T N +++ V++ +A +++K
Sbjct: 649 RNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLK 696
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 183/457 (40%), Gaps = 70/457 (15%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P + YN + V++ +D M+ P+ TY +I + G D+ALRL
Sbjct: 355 PDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRL 414
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL------ 121
+M+ LG APNVYTY ++ R +V +VL MK PN AT ++
Sbjct: 415 FSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSE 474
Query: 122 ------VHGVFR-----CLDPHK-AFELLIRFMER---EPLTQKL--------------V 152
V+ V R +P K F LI R E + K+
Sbjct: 475 EGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTT 534
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCL-----VTGLDL------ 201
N LL L++ A ++++ M +G+ P +++ + C V G++
Sbjct: 535 YNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIY 594
Query: 202 -----------------NETCGIL-------DTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
N C L D K G KP ++ +
Sbjct: 595 DGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFS 654
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ L+ + + L N+ +YN ++D + + + +A E+ + +++ P++V++NT+I
Sbjct: 655 KAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVI 714
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G C+ + + +L + G +P T+N+ + F++A + + M+E
Sbjct: 715 KGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCR 774
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
P+ +TY IL+ C G ++ K++ IS D
Sbjct: 775 PSELTYKILVDGYCKAGKHEEAMDFVTKIKEIDISFD 811
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 152/340 (44%), Gaps = 18/340 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNS-IDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P +N +I + + S +D A + + +M P TYN L++ + G
Sbjct: 492 GFEPDKDTFNTLISSYARCGSEVDSAKM-YGEMVKSGFTPCVTTYNALLNALAHRGDWKA 550
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +++ M+ G+ PN +Y++L+ + A V + +V + + + V P+ +R+LV
Sbjct: 551 AESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVL 610
Query: 124 GVFRCLD---PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+C +AF+ L ++ + L +V N++L S N M S+A +L + + G
Sbjct: 611 SNHKCRHLRGMERAFDQLQKYGYKPDL---VVINSMLSMFSRNKMFSKAREMLHFIHECG 667
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK-----PRFSTYLLLMEALYKAGR 235
P +T CL+ + C + +K G++ P +Y +++ + G
Sbjct: 668 LQPNL----FTYNCLMDLYVREDECWKAEEVLK-GIQNSVPEPDVVSYNTVIKGFCRKGL 722
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
E R L+ + + + +YN + + + + D A E+ R M + + P+ +T+
Sbjct: 723 MQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKI 782
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
L+ G+CK + + + + + E D + + C+
Sbjct: 783 LVDGYCKAGKHEEAMDFVTKIKEIDISFDDKSVKRLGSCI 822
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 221/487 (45%), Gaps = 6/487 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP YNA++D KS A ++M P TYN LI R G++DEA
Sbjct: 321 GFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEA 380
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV-- 122
+ L QM G P+V+TYT L+ GF + +V E M+ PN T +L+
Sbjct: 381 MELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKM 440
Query: 123 HG-VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
HG ++ K FE I+ E P + NTLL N M SE + + ++M G+
Sbjct: 441 HGNRGNFVEMMKVFEE-IKICECVP--DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 497
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+PE TF+ ++ ++ I + GV P STY ++ AL + G + ++
Sbjct: 498 VPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEK 557
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + R N +Y ++ + ++R + + E+ I P V TL+ +
Sbjct: 558 VLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYS 617
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + +T + L E GF PD T N+M+ R + L+ + + G P+
Sbjct: 618 KSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLT 677
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN L+ +S + +++ A + PDI +FN +I ++CR ++++A + F M
Sbjct: 678 TYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEM 737
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
GL PD +Y+ I + F EA M +NGC P+ T N +++ + R
Sbjct: 738 KDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRR 797
Query: 482 EEAHDIV 488
+EA +
Sbjct: 798 DEASSFI 804
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 129/564 (22%), Positives = 229/564 (40%), Gaps = 87/564 (15%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV-VDE 63
G+ Y ++I A + A + F+++ + C+P TYN++++ ++G+ +
Sbjct: 215 GVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSK 274
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
LV M+ G AP++YTY LI E V E MK P++ T +L+
Sbjct: 275 IAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLD 334
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ P +A E+L + ME +V N+L+ + + + EA + +M +G
Sbjct: 335 VYGKSRRPREAMEVL-KEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIK 393
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIK-------RGVKPRFSTYLLLMEALYKAGR 235
P+ +T T L++G E G D +K G +P T+ L++ G
Sbjct: 394 PDV----FTYTTLLSGF---EKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGN 446
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
VE + + V ++ ++N ++ F + M + + +EM+ P TFNT
Sbjct: 447 FVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNT 506
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
LIS + + + + +L+ G PD T+N+++ L R +E + L+EM +
Sbjct: 507 LISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGR 566
Query: 356 VPPNTITYNILIRSLCAIGDVAR-----------------------------------SL 380
PN +TY L+ + +V R +
Sbjct: 567 CKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETE 626
Query: 381 RLFQKMQADRISPDIYTFNALIQ-----------------------------------SF 405
R F +++ SPDI T NA++ +
Sbjct: 627 RAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMY 686
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
R EK+E ++ G++PD S++ +I A ++GR EA + F M+ G PD
Sbjct: 687 SRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDV 746
Query: 466 YTSNLILETLVQQGRFEEAHDIVK 489
T N + + F EA D+VK
Sbjct: 747 ITYNTFIASYASDSMFIEAIDVVK 770
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 160/340 (47%), Gaps = 1/340 (0%)
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCL-VTGLDLNETCGILDTFIK 213
+L+ ++N EA + +K+ + G P T++ + G+ ++ G++D+
Sbjct: 225 SLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKS 284
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
GV P TY L+ + + E + + +YN ++D + K
Sbjct: 285 SGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPRE 344
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A E+ +EM AP++VT+N+LIS + +D + + EL +++ G KPD FT+ +++
Sbjct: 345 AMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLS 404
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
+ + + A+ EM G PN T+N LI+ G+ +++F++++ P
Sbjct: 405 GFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVP 464
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
DI T+N L+ F + + F M G P+ +++ LI A + G FD+A +
Sbjct: 465 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIY 524
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
M G PD T N +L L + G +E++ ++ K+
Sbjct: 525 RRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKD 564
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 134/282 (47%), Gaps = 1/282 (0%)
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM-MDR 273
GV Y L+ A GR E + ++ + +YN++++ + K+ M +
Sbjct: 215 GVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSK 274
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
+ M+ +AP+L T+NTLIS + + + E+ + GF PDK T+N+++D
Sbjct: 275 IAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLD 334
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
++ R +A++ L EM G P+ +TYN LI + G + ++ L +M I P
Sbjct: 335 VYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKP 394
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
D++T+ L+ F + K + A K F M G +P+ +++ALIK G F E + F
Sbjct: 395 DVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVF 454
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
++ C PD T N +L Q G E + K K G
Sbjct: 455 EEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 496
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/488 (21%), Positives = 203/488 (41%), Gaps = 44/488 (9%)
Query: 50 ILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE---VFRVLE-- 104
++I + + G A L+ + G ++Y YT LI + + R E VF+ LE
Sbjct: 190 VIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEE 249
Query: 105 -------------------------------IMKERNVCPNEATVRSLVHGVFRCLDPHK 133
MK V P+ T +L+ R +
Sbjct: 250 GCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEE 309
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A E+ K+ N LL + EA +L++M G+ P T++ ++
Sbjct: 310 AAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLIS 369
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
L+E + +K+G+KP TY L+ K G+ D Y VF++ V+
Sbjct: 370 AYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGK----DDYAMKVFEEMRVA 425
Query: 254 ----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
N+ ++N +I ++ E++ + P++VT+NTL++ ++ +
Sbjct: 426 GCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEV 485
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+ + GF P++ TFN++I R F+ A+ M++ GV P+ TYN ++ +
Sbjct: 486 SGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAA 545
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
L G +S ++ +M+ R P+ T+ +L+ ++ ++E+ + + + P
Sbjct: 546 LARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQ 605
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
L+ KS E ++ FL + + G +PD T N ++ ++ + ++I+
Sbjct: 606 AVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILN 665
Query: 490 TSKERGIS 497
K+ G +
Sbjct: 666 FIKDSGFT 673
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 128/264 (48%), Gaps = 1/264 (0%)
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
S +++ L K GR L+ + D + ++ +Y +I + A + ++
Sbjct: 186 SVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKK 245
Query: 281 MRDRDIAPNLVTFNTLISGHCK-DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
+ + P L+T+N +++ + K K L+ + G PD +T+N++I R
Sbjct: 246 LEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGS 305
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+E+A + EM G P+ +TYN L+ ++ + ++M+A +P I T+N
Sbjct: 306 LYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYN 365
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
+LI ++ R +++A + M+ G++PD F+Y+ L+ K+G+ D A + F M
Sbjct: 366 SLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVA 425
Query: 460 GCNPDSYTSNLILETLVQQGRFEE 483
GC P+ T N +++ +G F E
Sbjct: 426 GCQPNICTFNALIKMHGNRGNFVE 449
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 119/282 (42%), Gaps = 2/282 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P YNAV+ AL + + + +M +CKP+ TY L+H V+
Sbjct: 531 GVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERM 590
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +++ P L+ + + + E R ++E+ P+ T+ ++V
Sbjct: 591 SALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSI 650
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
R K E+L F++ T L N+L+Y S ++ ILR++ +G P
Sbjct: 651 YGRRRMVSKTNEIL-NFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKP 709
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ +F+ + + E I G+ P TY + + +E +
Sbjct: 710 DIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVV 769
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
++ K+ N N+YN +ID FCK+N D A+ +R+ D
Sbjct: 770 KYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFISNLRNLD 811
>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/458 (27%), Positives = 219/458 (47%), Gaps = 14/458 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSI-DLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
+S ++P YN ++ A+ K + DL L M + P+R TYN L++G C++G
Sbjct: 231 VSEFKVNPDNVTYNTILKAMSKKGRLSDLKEL-LLDMKKNGLVPNRVTYNNLVYGYCKLG 289
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+ EA ++V+ M+ P++ TY ILI+G CNA + E +++ MK + P+ T
Sbjct: 290 SLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYN 349
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA--AILRKMG 177
+L+ G F L R + + + N + + +S + E A+ RK+
Sbjct: 350 TLIDGCFEL-----GLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVK 404
Query: 178 D----RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
+ G+ P+ T+ + + DL+ ++ ++G+K T +++AL K
Sbjct: 405 ELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
+ E LN K + + +Y +I F + +++A E+ EM+ I P + TF
Sbjct: 465 RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTF 524
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
N+LI G C + E L E G PD TFNS+I C+ R E A + +E ++
Sbjct: 525 NSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIK 584
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
P+ T NIL+ LC G ++L F + +R D T+N +I +FC+ K+++
Sbjct: 585 HSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKE 643
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
A M GL PD F+Y++ I L++ G+ E +
Sbjct: 644 AYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDE 681
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 237/492 (48%), Gaps = 5/492 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV--- 60
L PS L++ + A + +A FQ+M + KP+ T N L+ G+ R
Sbjct: 125 LSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFS 184
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM-KERNVCPNEATVR 119
+ A + M +G + NV T+ +L++G+C ++ + +LE M E V P+ T
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+++ + + ELL+ + + ++ N L+Y EA I+ M
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
LP+ T++ + L + E ++D ++P TY L++ ++ G +E
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD-RDIAPNLVTFNTLIS 298
+ + + D + +N ++N+ + CK + T +E+ D +P++VT++TLI
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
+ K ++ E++ + + G K + T N+++D LC+ + ++A + L+ + G
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ +TY LI V ++L ++ +M+ +I+P + TFN+LI C K E A + F
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+ GL PD+ +++++I K GR ++A + + ++ PD+YT N++L L ++
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604
Query: 479 GRFEEAHDIVKT 490
G E+A + T
Sbjct: 605 GMTEKALNFFNT 616
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 167/418 (39%), Gaps = 74/418 (17%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN ++ K S+ A+ + M PD TYNILI+G+C G + E
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREG 329
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDG----------------------------------- 89
L L+ M+ L P+V TY LIDG
Sbjct: 330 LELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKW 389
Query: 90 FCNA-KRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
C KR A +V E++ P+ T +L+ + D A E++ ++
Sbjct: 390 LCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM 449
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
+ NT+L L EA +L RG++ + T+ + + + +
Sbjct: 450 NTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMW 509
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
D K + P ST+ L+ L G+ + + + L+ + +++N +I +CK
Sbjct: 510 DEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKE 569
Query: 269 NMMDRATE-----------------------ICRE-------------MRDRDIAPNLVT 292
+++A E +C+E + +R++ + VT
Sbjct: 570 GRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV--DTVT 627
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
+NT+IS CKD ++ + +LL + E G +PD+FT+NS I L + + + L +
Sbjct: 628 YNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 154/327 (47%), Gaps = 11/327 (3%)
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST--YLLLMEALYKAGRDVEGD 240
P + FD ++ + + I I+ +KP T LL+ Y + +
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 241 RYLNHVFKDRL---VS-NVNSYNMVIDCFCKVNMMDRATEICREM-RDRDIAPNLVTFNT 295
R VF D + VS NV ++N++++ +C ++ A + M + + P+ VT+NT
Sbjct: 189 R---EVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNT 245
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
++ K + +ELL+ + + G P++ T+N+++ C+ ++A + M +
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
V P+ TYNILI LC G + L L M++ ++ PD+ T+N LI + +A
Sbjct: 306 VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEAR 365
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM-EQNGCNPDSYTSNLILET 474
K M G++ + +++ +K L K + + + + + +G +PD T + +++
Sbjct: 366 KLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKA 425
Query: 475 LVQQGRFEEAHDIVKTSKERGISFKSF 501
++ G A ++++ ++GI +
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTI 452
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 211/410 (51%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ LGIS + YN +I+ + + + LA +M +PD T N L++G C
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ +A+ LV QM +GY P+ T+T LI G + +E +++ M +R P+ T +
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+V+G+ + D A LL + + ++ +T++ L +A + +M ++G
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P T+ ++CL ++ +L I+R + P T+ L++A K G+ V+ +
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + K + N+ +Y+ +I+ FC ++ + A ++ M +D PN+VT+NTLI+G
Sbjct: 344 KLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK V K EL + + G + T+ ++I +A ++A +MV GV PN
Sbjct: 404 CKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 463
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
+TYNIL+ LC G +A+++ +F+ +Q + PDIYT+N +I+ C+ K
Sbjct: 464 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 223/475 (46%), Gaps = 35/475 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ ++ A+ K N DL ++M + + +TYNILI+ CR + AL L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P++ T L++GFC+ R+++ +++ M E P+ T
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTF--------- 186
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
TL++ L ++ ASEA A++ +M RG P+ T
Sbjct: 187 --------------------------TTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVT 220
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ V L D + +L+ ++ Y ++++L K + + +
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ NV +Y+ +I C C A+ + +M +R I PNLVTF+ LI K ++
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
K +L +++ P+ FT++S+I+ C R +A L M+ PN +TYN LI
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
C V + + LF++M + + T+ LI F + + A+ F M+++G+
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
P+ +Y+ L+ L K+G+ +A F ++++ PD YT N+++E + + G+++
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 218/476 (45%), Gaps = 43/476 (9%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y V+ + +D A F M+ + P ++ L+ I ++ D + ++ME
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
LG + N+YTY ILI+ FC R++ +L M + P+ T+ SL++G
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNG-------- 157
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+ + S+A A++ +M + GY P++ TF
Sbjct: 158 ---------------------------FCHGNRISDAVALVDQMVEMGYKPDTVTF---- 186
Query: 193 TCLVTGLDLN----ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
T L+ GL L+ E ++D ++RG +P TY ++ L K G LN +
Sbjct: 187 TTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEA 246
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
++ +NV Y+ VID CK D A + EM ++ + PN++T+++LIS C
Sbjct: 247 AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSD 306
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
LL ++E P+ TF+++ID + + A EM++ + PN TY+ LI
Sbjct: 307 ASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLIN 366
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
C + + + ++ + M P++ T+N LI FC+ +++K + F M GL
Sbjct: 367 GFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVG 426
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ +Y+ LI ++ D A+ F M G +P+ T N++L+ L + G+ +A
Sbjct: 427 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 482
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 130/284 (45%), Gaps = 35/284 (12%)
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ R ++ ++ ++ K+N D +M I+ NL T+N LI+ C+ + +
Sbjct: 71 QSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLS 130
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
LL +++ G++PD T NS+++ C +R DA+ + +MVE G P+T+T+ LI
Sbjct: 131 LALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLI 190
Query: 368 R-----------------------------------SLCAIGDVARSLRLFQKMQADRIS 392
LC GD +L L KM+A +I
Sbjct: 191 HGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIE 250
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
++ ++ +I S C+ + A F M G+RP+ +YS+LI L GR+ +A +
Sbjct: 251 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRL 310
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M + NP+ T + +++ V++G+ +A + + +R I
Sbjct: 311 LSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 107/239 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y+++I L A M + P+ T++ LI + G + +A
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA 342
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L ++M PN++TY+ LI+GFC R+ E ++LE+M ++ PN T +L++G
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLING 402
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ K EL +R + + TL++ A + ++M G P
Sbjct: 403 FCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 462
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + L L + + + + ++P TY +++E + KAG+ G Y
Sbjct: 463 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%)
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
+DA+ M + P+ I ++ L+ ++ + + +KM+ IS ++YT+N
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI FCR +++ A M+ LG PD + ++L+ R +A M + G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
PD+ T ++ L + EA ++ +RG
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG 213
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 220/471 (46%), Gaps = 45/471 (9%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + V+ + K N D+ + +M D +++ ILIH CR + AL L
Sbjct: 602 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 661
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LG+ P++ T L++GFC R E +++ M PN ++++G+ +
Sbjct: 662 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 721
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D + A E+ ++ + NTL+ LSN+ ++AA +LR M R P
Sbjct: 722 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 781
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
F ++DTF+K G LL LYK +
Sbjct: 782 FT----------------ALIDTFVKEG-------NLLEARNLYK------------EMI 806
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ +V NV +YN +I+ FC + A + M + P++VT+NTLI+G CK V
Sbjct: 807 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 866
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+L + G D FT+N++I C+A + A + MV+ GV P+ +TYNIL+
Sbjct: 867 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 926
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G + ++L + + +Q + DI T+N +IQ CR +K+++A F S+ G++
Sbjct: 927 DCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVK 986
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP----------DSYTS 468
PD +Y +I L + G EA + M+++G P D YTS
Sbjct: 987 PDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTS 1037
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 200/428 (46%), Gaps = 37/428 (8%)
Query: 34 QQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNA 93
Q+M + D +++ ILIH CR + AL ++ +M LGY P++ T+ L+ GFC
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 94 KRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC 153
R+ + F ++ +M + PN +L+ G+ + + + A ELL ME++ L +V
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNE-MEKKGLGADVVT 213
Query: 154 -NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
NTLL L + S+AA +LR M +
Sbjct: 214 YNTLLTGLCYSGRWSDAARMLRDM-----------------------------------M 238
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
KR + P T+ L++ K G E + + + N +YN +I+ C +
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + M + PN+VT+NTLISG CK V + +L + GF D FT+N++I
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
C+ + ALD MV V P+ IT+ IL+ LC G++ +L F M+
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
I +N +I C+ +K+EKA + F + G++PD +Y+ +I L K+G EA +
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478
Query: 453 FLSMEQNG 460
M++ G
Sbjct: 479 IRRMKEEG 486
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 206/468 (44%), Gaps = 35/468 (7%)
Query: 29 AYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILID 88
A+ F +M Q P + L+ + + + ++ME G + ++Y++TILI
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
FC R++ VL M + P+ T SL+HG F L+ R
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHG----------FCLVNRI------- 157
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
+A +++ M GY P ++ + L +LN +L
Sbjct: 158 ------------------GDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELL 199
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ K+G+ TY L+ L +GR + R L + K + +V ++ +ID F K
Sbjct: 200 NEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQ 259
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+D A E+ +EM + PN VT+N++I+G C ++ ++ ++ G P+ T+
Sbjct: 260 GNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTY 319
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N++I C+ ++ + M G + TYN LI C +G + +L +F M +
Sbjct: 320 NTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
R++PDI T L+ C +IE A F M +Y+ +I L K+ + ++
Sbjct: 380 RRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEK 439
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
A + F + G PD+ T +++ L + G EA ++++ KE GI
Sbjct: 440 AWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/516 (25%), Positives = 215/516 (41%), Gaps = 45/516 (8%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN +I L K++ ++ A+ F ++ V+ KPD TY I+I G+C+ G EA L+++M+
Sbjct: 424 YNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMK 483
Query: 73 GLGY--------------------------------APNVYTYTILIDGFCNAKRVAEVF 100
G N + LI + V
Sbjct: 484 EEGIICQMNAEDDHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIP-IAFSSSVKGFV 542
Query: 101 RVLEIMKERNVCPNEATVRSLV----HGVFR--------CLDPHKAFELLIRFMEREPLT 148
R ++ ER P + RS H +R C+ AF L ++ P+
Sbjct: 543 RRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIP 602
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
+ +L ++ + + KM + G + +F + C L+ +L
Sbjct: 603 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 662
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+K G +P T L+ + R E ++ + V NV YN VI+ CK
Sbjct: 663 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 722
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
++ A E+ M + I + VT+NTLISG LL +++ P+ F
Sbjct: 723 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 782
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
++ID + +A + EM+ V PN TYN LI C G + + +F M +
Sbjct: 783 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 842
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
PD+ T+N LI FC+ ++E K F M GL D F+Y+ LI ++G+ +
Sbjct: 843 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 902
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
A++ F M G +PD T N++L+ L G+ E+A
Sbjct: 903 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 938
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/525 (22%), Positives = 216/525 (41%), Gaps = 47/525 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN +I K +D FQ+MS + D FTYN LIHG C++G + A
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVA 370
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + M P++ T+ IL+ G C + + M+E ++HG
Sbjct: 371 LDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHG 430
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG---- 180
+ + KA+EL R ++ L N EA ++R+M + G
Sbjct: 431 LCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQ 490
Query: 181 ------YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST---------YLL 225
+L E S+ + ++ ++ ++ E +++R + FS+ YLL
Sbjct: 491 MNAEDDHLEEHSSSNKEIS--LSLREIWERSKSNPFWMQRLIPIAFSSSVKGFVRRHYLL 548
Query: 226 LMEA---LYKAGRDVEGDRYLNH-----------------------VFKDRLVSNVNSYN 259
L R G + +H + + R + ++ +
Sbjct: 549 LERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFT 608
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
V+ K+N D + +M + I+ +L +F LI C+ + + LL +++
Sbjct: 609 RVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKL 668
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
GF+P T S+++ C+ +RF++A+ + M +G PN + YN +I LC D+ +
Sbjct: 669 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 728
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
L +F M+ I D T+N LI + A + M+ + P+ ++ALI
Sbjct: 729 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 788
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+K G EA+ + M + P+ +T N ++ G +A
Sbjct: 789 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA 833
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 196/470 (41%), Gaps = 70/470 (14%)
Query: 27 DLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTIL 86
D A+ F +M + P + ++ I ++ D + L +ME LG + ++Y++TIL
Sbjct: 586 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 645
Query: 87 IDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREP 146
I FC R++ +L M + P+ T+ SL++G
Sbjct: 646 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNG---------------------- 683
Query: 147 LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
+ EA +++ M G++P ++ + L DLN
Sbjct: 684 -------------FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 730
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+ K+G++ TY L+ L +GR + R L
Sbjct: 731 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL----------------------- 767
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
R+M R I PN++ F LI K+ + + R L ++ P+ F
Sbjct: 768 ------------RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 815
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+NS+I+ C DA MV G P+ +TYN LI C V ++LF +M
Sbjct: 816 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 875
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ D +T+N LI +C+ K+ A+K F M+ G+ PD +Y+ L+ L +G+
Sbjct: 876 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 935
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++A ++++ + D T N+I++ L + + +EA + ++ +G+
Sbjct: 936 EKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 985
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 121/237 (51%)
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
+++ FC+ N A + M PN+V +NT+I+G CK+ +++ E+ + + G
Sbjct: 680 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 739
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
+ D T+N++I L + R+ DA L +MV+ + PN I + LI + G++ +
Sbjct: 740 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 799
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
L+++M + P+++T+N+LI FC + A+ F M++ G PD +Y+ LI
Sbjct: 800 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 859
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
KS R ++ + F M G D++T N ++ Q G+ A + + G+S
Sbjct: 860 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 916
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 115/536 (21%), Positives = 213/536 (39%), Gaps = 47/536 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P + A+ID VK ++D A +++M P+ TYN +I+G+C G + +A
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK 301
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M G PNV TY LI GFC + V E ++ + M + T +L+HG
Sbjct: 302 KTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGY 361
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ A ++ + R + LL+ L N A M +
Sbjct: 362 CQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGI 421
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
++ + L + + + GVKP TY +++ L K G E D +
Sbjct: 422 VAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRR 481
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL-------VTFNTLIS 298
+ ++ ++ +N+ + ++ N + RE+ +R + + F++ +
Sbjct: 482 MKEEGIICQMNAEDDHLEEHSSSN--KEISLSLREIWERSKSNPFWMQRLIPIAFSSSVK 539
Query: 299 GHCK----------------------DAEVHKTRELLVMLLECGFKPDKFT--------- 327
G + + H RE L L C D F+
Sbjct: 540 GFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSR 599
Query: 328 -------FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
F ++ + + ++F+ + +M G+ + ++ ILI C ++ +L
Sbjct: 600 PIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLAL 659
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
L KM P I T +L+ FC+ N+ ++A SM G P+ Y+ +I L
Sbjct: 660 ALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGL 719
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
K+ + A + F ME+ G D+ T N ++ L GR+ +A +++ +R I
Sbjct: 720 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKI 775
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 161/388 (41%), Gaps = 35/388 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG PS + +++ N I A+ M +P+ YN LI G+C+ G ++
Sbjct: 135 LGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNI 194
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L+ +ME G +V TY L+ G C + R ++ R+L M +R++ P+ T +L+
Sbjct: 195 ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALID 254
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
F+++ L EA + ++M P
Sbjct: 255 ----------------VFVKQGNL-------------------DEAQELYKEMIQSSVDP 279
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + L L + D +G P TY L+ K EG +
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +++ +YN +I +C+V + A +I M R + P+++T L+ G C +
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E+ + E +N MI LC+A + E A + + GV P+ TY
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRI 391
I+I LC G + L ++M+ + I
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 151/332 (45%), Gaps = 6/332 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P+ +YN VI+ L K+ ++ A F M + D TYN LI G+ G +
Sbjct: 703 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 762
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A RL++ M PNV +T LID F + E + + M R+V PN T SL++
Sbjct: 763 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 822
Query: 124 G--VFRCL-DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
G + CL D F+L++ + + NTL+ + + + +M +G
Sbjct: 823 GFCIHGCLGDAKYMFDLMV---SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 879
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ ++ T++ + LN + + + GV P TY +L++ L G+ +
Sbjct: 880 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 939
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + K + ++ +YN++I C+ + + A + R + + + P+ + + T+ISG
Sbjct: 940 VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 999
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
C+ + +L + E GF P + ++ +
Sbjct: 1000 CRKGLQREADKLCRRMKEDGFMPSERIYDETL 1031
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P F ++ R+E + +M +G+ + ++ ILI C ++ +L +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
KM P I TF +L+ FC +N+I A M+ G P+ Y+ LI L K
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+G + A + ME+ G D T N +L L GR+ +A +++ +R I+
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN 243
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
RFEDA EMV P+ + + L+ + + + QKM+ IS D+Y+F
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI FCR +++ A M+ LG P ++ +L+ R +A + M ++
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G P+ N +++ L + G A +++ +++G+
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLG 208
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 222/493 (45%), Gaps = 36/493 (7%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGY-APNVYTYTILIDGFC 91
F+ + + +PD FT+N + G +DEA+ ++++M G APN ++Y ++I G
Sbjct: 140 FELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLW 199
Query: 92 NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL 151
A + ++ + M E+ V PN T +++ G + D F L + + +
Sbjct: 200 KAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVI 259
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
N LL L E AA+L +M R +P+ T+ D + +
Sbjct: 260 TYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEES 319
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+K+GVK T +L+ L K G+ + + L + L+ YN +I+ +C++ +
Sbjct: 320 VKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDL 379
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
+ A I ++M+ R I P+ +T+N LI+G K + + +L++ + + G P TFN++
Sbjct: 380 EGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTL 439
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA-------------- 377
ID RA + E LS+M E G+ PN ++Y ++ + C G +
Sbjct: 440 IDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDV 499
Query: 378 ---------------------RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
++ L +KM++ + P I T+N LI+ C+ ++I +AE+
Sbjct: 500 LPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEE 559
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
S+ GL PD SY+ LI A D A + M + G P T ++ +L
Sbjct: 560 LLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLG 619
Query: 477 QQGRFEEAHDIVK 489
GR E ++ +
Sbjct: 620 GAGRVHEMENLYQ 632
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/495 (24%), Positives = 226/495 (45%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ YN VI L K+ + A F +M P+ TYN +I G + G ++ R
Sbjct: 185 APNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFR 244
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L QM G PNV TY +L+ G C A R+ E VL+ M R + P+ T L G
Sbjct: 245 LWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHS 304
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
R D L +++ C+ LL L + S+A +L+ + + G L +
Sbjct: 305 RTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTV 364
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
++ + DL I R ++P TY L+ L K R E + +
Sbjct: 365 IYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEM 424
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K+ + +V ++N +ID + + +++ I +M+++ + PN+V++ ++++ CK+ ++
Sbjct: 425 EKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKI 484
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ +L + P +N++ID + A +M GVPP+ +TYN+L
Sbjct: 485 LEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLL 544
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I+ LC ++ + L ++ ++PD+ ++N LI + C + ++A + M G+
Sbjct: 545 IKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGI 604
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+P +Y L +L +GR E + + M P S N++++ + G +
Sbjct: 605 KPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEA 664
Query: 487 IVKTSKERGISFKSF 501
+ K ++GI+ +
Sbjct: 665 LRKEMSDKGIAVGDY 679
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 187/411 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN ++ L ++ + +M+ + PD FTY+IL G R G
Sbjct: 253 GLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTM 312
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L ++ G YT +IL++G C ++++ VL+ + + +L++G
Sbjct: 313 LSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLING 372
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D AF + + R + N L+ L +EA ++ +M G P
Sbjct: 373 YCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPS 432
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + L + IL ++G+KP +Y ++ A K G+ +E L+
Sbjct: 433 VETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILD 492
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+F ++ YN +ID + + D+A + +M+ + P++VT+N LI G CK +
Sbjct: 493 DMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQS 552
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + ELL L G PD ++N++I C + AL+ EM + G+ P+ TY
Sbjct: 553 QISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYR 612
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+L SL G V L+Q+M + P +N ++ ++ + + K E
Sbjct: 613 MLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVE 663
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 1/163 (0%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI-SPDIYTF 398
R D +V P+T T+N +++ GD+ ++ + ++M D +P+ +++
Sbjct: 132 RHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSY 191
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
N +I + A K F M + P++ +Y+ +I IK G + + + M +
Sbjct: 192 NVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLR 251
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+G P+ T N++L L + GR E ++ R + F
Sbjct: 252 HGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGF 294
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 226/459 (49%), Gaps = 19/459 (4%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
TY +++ G+C G+ ++AL LV+++ G+ Y P V+ Y +I G C A RV + ++VLE M
Sbjct: 56 TYKLVVDGLCGAGMANQALELVRELSGV-YTPTVFIYNGIITGLCRASRVMDAYKVLEKM 114
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
E ++ PN T L++G+ R A E+ + TL+ LS
Sbjct: 115 VEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEI 174
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFST 222
EA LR M ++ L E T T T +V GL L++ ++ + GV+P T
Sbjct: 175 DEA---LRVMIEQRSL-ELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVT 230
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN----VNSYNMVIDCFCKVNMMDRATEIC 278
Y L+ + G E DR + +++ +Y +D CK +DRA +
Sbjct: 231 YSNLVHGFRQHG---ELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSV 287
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
E+R + P++VT++ LI+ + + + ELL + G KPD T++++I+ LC+
Sbjct: 288 EELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKE 347
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+F+DA L M G PPN +TYN ++ LC G + R+++ M R SPD+ T+
Sbjct: 348 RKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTY 407
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+ ++ + ++ A K F + + PD +YS +I +L ++G+ +EA + ME
Sbjct: 408 SIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEV 467
Query: 459 N--GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G N + L+ L R + A IV+ ++ERG
Sbjct: 468 TVAGDNICRALAGLV-AALCDAKRTDSARRIVEVARERG 505
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 185/412 (44%), Gaps = 35/412 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ Y +++ L +SN LA FQ+M + CKP+ TY LI + R G +DEAL
Sbjct: 119 IVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEAL 178
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
R++ + L +V T T ++ G C A R+ + + +E M++ V PNE T +LVHG
Sbjct: 179 RVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHG- 237
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
FR H + +IRF E E + + EAAA GYL
Sbjct: 238 FR---QHGELDRVIRFFEEEK--------------ARKGGSLEAAAY------PGYLDAL 274
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
Y L+ ++ + GV P TY +L+ +AG+ L
Sbjct: 275 CKAGY----------LDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLED 324
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++ + +V +Y+ +I+ CK A + M PN+VT+N+++ G CK +
Sbjct: 325 MRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGK 384
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + + M+L+ PD T++ +++ L +A + A+ + P+ Y++
Sbjct: 385 MDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSM 444
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDI-YTFNALIQSFCRMNKIEKAEK 416
+I SLC G + + ++ M+ +I L+ + C + + A +
Sbjct: 445 VITSLCRAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAKRTDSARR 496
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 151/323 (46%), Gaps = 37/323 (11%)
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+ ++ G K + LL L++ + E R + +V +Y +V+D C
Sbjct: 9 SVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAG 68
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
M ++A E+ RE+ P + +N +I+G C+ + V ++L ++E P+ FT+
Sbjct: 69 MANQALELVRELSGV-YTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYT 127
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+++ LCR+++ + A + EM G PN ITY LI+ L G++ +LR+ + ++
Sbjct: 128 ILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSL 187
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK----------- 438
+ D+ T ++ C+ ++++ A K M +G+RP+ +YS L+
Sbjct: 188 ELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRV 247
Query: 439 -------------------------ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
AL K+G D A+++ + Q+G PD T ++++
Sbjct: 248 IRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLIN 307
Query: 474 TLVQQGRFEEAHDIVKTSKERGI 496
T + G+F+ + ++++ + G+
Sbjct: 308 TFARAGQFDASLELLEDMRRNGV 330
>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
Length = 662
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/522 (23%), Positives = 231/522 (44%), Gaps = 57/522 (10%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y A+I AL K+ +D + ++ +P TYN+L+ +C+ G V+EA RL +ME
Sbjct: 14 YTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRME 73
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G P+V T+ ILI+G +R EV VL+ M++ V PNE L+ + C H
Sbjct: 74 QGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIG--WHCRKGH 131
Query: 133 -----KAF-ELLIRFMEREPLTQKLVCNTL------------------------------ 156
+ F E++++ M+ +T L+ L
Sbjct: 132 CSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNT 191
Query: 157 --LYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGI------- 207
+ L +I +M RG P + L G E GI
Sbjct: 192 VVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNK 251
Query: 208 ----------LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNS 257
+ T + +G++ TY +++ K + E + + + ++ +
Sbjct: 252 GKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFT 311
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
+N ++ +C + M+ + +M+ + P++V++ T+I GHCK ++ K +E L L+
Sbjct: 312 FNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELM 371
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
+ G KP+ F +N++I R A+D + M G+ P +TY L+ +C G V
Sbjct: 372 DRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVE 431
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+ +F + + + + + + +IQ +C++ K+ +A F M + G+ P+ +Y+ L+
Sbjct: 432 EAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLM 491
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
A KSG +EA + F M +G PD+ T ++ ++G
Sbjct: 492 YAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEKG 533
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 198/435 (45%), Gaps = 19/435 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+SP+ +YN +I + A F +M + + KP TYN++ +C+ G ++
Sbjct: 110 LGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMER 169
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCN-AKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A R+++ M +G + + ++ +R+ V + M R + PN+ + + +
Sbjct: 170 AERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACM 229
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ + +A + + L+ EA +++ M ++G
Sbjct: 230 RELCKGGKHQEAVGIWFK------------------TLNKGKYMKEATKVIQTMLNKGIE 271
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+S T++ + + E + +RG KP T+ L+ A G+ E
Sbjct: 272 LDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHL 331
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L+ + + L ++ SY +ID CK + +A E E+ DR + PN+ +N LI G+ +
Sbjct: 332 LDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGR 391
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ ++ + + + G +P T+ S++ +C A E+A S+ E V I
Sbjct: 392 NGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIG 451
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y I+I+ C +G + ++ F++M++ ISP+ T+ L+ ++ + E+A K F M+
Sbjct: 452 YTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMV 511
Query: 423 TLGLRPDNFSYSALI 437
G+ PDN +Y LI
Sbjct: 512 GSGVIPDNITYGTLI 526
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
N SY +I CK +D E+ E+ + P +VT+N L+ CK V + L
Sbjct: 10 NEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLK 69
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ + G P TF +I+ L R RF + L EM + GV PN + YN LI C
Sbjct: 70 GRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRK 129
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G +++LRLF +M ++ P T+N + ++ C+ ++E+AE+ ML++G+ +
Sbjct: 130 GHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLF 189
Query: 434 SALIKALIKSGRFDEAKQTFLS-MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
+ ++ L++ R E+ + + M G P+ + L + G+ +EA I +
Sbjct: 190 NTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTL 249
Query: 493 ERGISFK 499
+G K
Sbjct: 250 NKGKYMK 256
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 134/292 (45%), Gaps = 18/292 (6%)
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+Y +++AL KAG+ G L +++ L V +YN+++D CK ++ A + M
Sbjct: 13 SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 72
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+ P++VTF LI+G + + +L + + G P++ +N +I CR
Sbjct: 73 EQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHC 132
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
AL EMV + P +TYN++ ++LC G++ R+ R+ + M + ++ FN +
Sbjct: 133 SQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTV 192
Query: 402 IQSFC-RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR--------------- 445
+ R ++E M+T G+RP++ +A ++ L K G+
Sbjct: 193 VAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKG 252
Query: 446 --FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
EA + +M G DS T N+++ + + EEA + RG
Sbjct: 253 KYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRG 304
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 1/201 (0%)
Query: 281 MRD-RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
MR+ R++A N ++ +I CK +V E+L L G +P T+N ++D LC++
Sbjct: 1 MRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSG 60
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
R E+A M + G+ P+ +T+ ILI L + Q+M+ +SP+ +N
Sbjct: 61 RVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYN 120
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI CR +A + F M+ ++P +Y+ + KAL K G + A++ M
Sbjct: 121 ELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSI 180
Query: 460 GCNPDSYTSNLILETLVQQGR 480
G N ++ L+Q+ R
Sbjct: 181 GMTVHCGLFNTVVAWLLQRTR 201
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 220/471 (46%), Gaps = 45/471 (9%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + V+ + K N D+ + +M D +++ ILIH CR + AL L
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LG+ P++ T L++GFC R E +++ M PN ++++G+ +
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D + A E+ ++ + NTL+ LSN+ ++AA +LR M R P
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
F ++DTF+K G LL LYK +
Sbjct: 257 FT----------------ALIDTFVKEG-------NLLEARNLYK------------EMI 281
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ +V NV +YN +I+ FC + A + M + P++VT+NTLI+G CK V
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 341
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+L + G D FT+N++I C+A + A + MV+ GV P+ +TYNIL+
Sbjct: 342 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 401
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G + ++L + + +Q + DI T+N +IQ CR +K+++A F S+ G++
Sbjct: 402 DCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVK 461
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP----------DSYTS 468
PD +Y +I L + G EA + M+++G P D YTS
Sbjct: 462 PDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTS 512
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 158/359 (44%)
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
C+ AF L ++ P+ + +L ++ + + KM + G +
Sbjct: 55 LHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDL 114
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+F + C L+ +L +K G +P T L+ + R E ++
Sbjct: 115 YSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDS 174
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ V NV YN VI+ CK ++ A E+ M + I + VT+NTLISG
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
LL +++ P+ F ++ID + +A + EM+ V PN TYN
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI C G + + +F M + PD+ T+N LI FC+ ++E K F M G
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
L D F+Y+ LI ++G+ + A++ F M G +PD T N++L+ L G+ E+A
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 196/470 (41%), Gaps = 70/470 (14%)
Query: 27 DLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTIL 86
D A+ F +M + P + ++ I ++ D + L +ME LG + ++Y++TIL
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 87 IDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREP 146
I FC R++ +L M + P+ T+ SL++G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNG---------------------- 158
Query: 147 LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
+ EA +++ M G++P ++ + L DLN
Sbjct: 159 -------------FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+ K+G++ TY L+ L +GR + R L
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL----------------------- 242
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
R+M R I PN++ F LI K+ + + R L ++ P+ F
Sbjct: 243 ------------RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 290
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+NS+I+ C DA MV G P+ +TYN LI C V ++LF +M
Sbjct: 291 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ D +T+N LI +C+ K+ A+K F M+ G+ PD +Y+ L+ L +G+
Sbjct: 351 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 410
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++A ++++ + D T N+I++ L + + +EA + ++ +G+
Sbjct: 411 EKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 121/237 (51%)
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
+++ FC+ N A + M PN+V +NT+I+G CK+ +++ E+ + + G
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
+ D T+N++I L + R+ DA L +MV+ + PN I + LI + G++ +
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
L+++M + P+++T+N+LI FC + A+ F M++ G PD +Y+ LI
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
KS R ++ + F M G D++T N ++ Q G+ A + + G+S
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 391
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 151/332 (45%), Gaps = 6/332 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P+ +YN VI+ L K+ ++ A F M + D TYN LI G+ G +
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A RL++ M PNV +T LID F + E + + M R+V PN T SL++
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 124 G--VFRCL-DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
G + CL D F+L++ + + NTL+ + + + +M +G
Sbjct: 298 GFCIHGCLGDAKYMFDLMV---SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ ++ T++ + LN + + + GV P TY +L++ L G+ +
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + K + ++ +YN++I C+ + + A + R + + + P+ + + T+ISG
Sbjct: 415 VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
C+ + +L + E GF P + ++ +
Sbjct: 475 CRKGLQREADKLCRRMKEDGFMPSERIYDETL 506
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+F+DA EM++ P+ + + ++ + + + L+ KM+ IS D+Y+F
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI FCR +++ A M+ LG RP + +L+ + RF EA SM+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G P+ N ++ L + A ++ +++GI
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGI 215
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 232/490 (47%), Gaps = 20/490 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQM--SVDQCKPDRFTYNILIHGICRIGVVD 62
G P T +N V+ A V + +D+A ++M S PD F+YN++I G+ R G
Sbjct: 152 GARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGS 211
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+AL++ +M +G PN TY +IDG + FR+ + M PN T L+
Sbjct: 212 DALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLL 271
Query: 123 HGVFRC--LDPHKAF--ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
G+ R +D + E+ M + T ++ + L + +M S A L+K
Sbjct: 272 SGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVM 331
Query: 179 RGYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
G YT + L+ GL + + +L+ + G+ P Y L+ Y
Sbjct: 332 LGA--------YTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLING-YCQV 382
Query: 235 RDVEGDRYLNHVFKDRLVSNVN-SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
RD+ G + K R + + +YN +I+ CK+ M+ +A ++ EM + P++ TF
Sbjct: 383 RDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETF 442
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
NTLI + ++ K +L + + G K D +F S++ C+ + +A+ L +M+
Sbjct: 443 NTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIY 502
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
V PN YN +I + GD ++ L +KM+ +S I T+N L++ CR ++I++
Sbjct: 503 KDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDE 562
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
AE+ +++ GLRPD SY+ +I A G D+A + M + G P T + ++
Sbjct: 563 AEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVS 622
Query: 474 TLVQQGRFEE 483
L GR +
Sbjct: 623 ALASAGRVHD 632
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 219/491 (44%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN VI L +S A F +M P+ TYN +I G + G ++ RL
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 251
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
QM G PN+ TY +L+ G C A R+ E +++ M ++ P+ T L G+ R
Sbjct: 252 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 311
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ L +++ + C+ LL L + ++A +L + G +P +
Sbjct: 312 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 371
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + DL I + R ++P TY L+ L K + + + +
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K + +V ++N +ID + +++ + +M+ + I ++++F +++ CK+ ++
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ +L ++ P+ +NS+ID + E A + +M GV + +TYN+L+
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 551
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+ LC + + L ++ + PD+ ++N +I + C +KA + M G+R
Sbjct: 552 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 611
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P +Y L+ AL +GR + + + M P S ++++ V+ + +
Sbjct: 612 PTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASL 671
Query: 488 VKTSKERGISF 498
K E+GI+F
Sbjct: 672 KKEMSEKGIAF 682
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 191/403 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN ++ L ++ +D + +M+ PD FTY+IL G+ R G
Sbjct: 259 GPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTM 318
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L + G YT +IL++G C +VA+ +VLE++ + P +L++G
Sbjct: 319 LSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLING 378
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D AF + + R + N L+ L M ++A ++ +M G P
Sbjct: 379 YCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPS 438
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + T L + +L ++G+K ++ +++A K G+ E L+
Sbjct: 439 VETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILD 498
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N YN +ID + + ++A + +M++ ++ ++VT+N L+ G C+ +
Sbjct: 499 DMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSS 558
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + EL+ L G +PD ++N++I C + AL+ L EM ++G+ P TY+
Sbjct: 559 QIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYH 618
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
L+ +L + G V L+Q+M + P + ++ ++ R
Sbjct: 619 TLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 661
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 103/230 (44%), Gaps = 8/230 (3%)
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A E+C + P+L + N L+ R +L+ G +PD F +N ++
Sbjct: 112 AGEVCSPL------PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQ 165
Query: 334 CLCRAHRFEDALDCLSEM--VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
A + AL + M E PP+ +YN++I L G + +L++F +M +
Sbjct: 166 ACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGV 225
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
P+ T+N +I + +E + ML G +P+ +Y+ L+ L ++GR DE +
Sbjct: 226 VPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRV 285
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
M + PD +T +++ + L + G + S ++G+ ++
Sbjct: 286 LMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAY 335
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 229/476 (48%), Gaps = 6/476 (1%)
Query: 16 VIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLG 75
+++ +++ +I+ + L F+ M CKPD Y+ ++ C++ +DEA +L +M
Sbjct: 241 LVNFVIQDKAIEASKL-FRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVES 299
Query: 76 YAP-NVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
AP N +T + G C + ++ + F M+E ++ ++ L+ + KA
Sbjct: 300 KAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQE-SLSSSQPVYDMLIRLLIESGRIDKA 358
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
E + R C++++ L A ++L M RGY P+ +T +
Sbjct: 359 EEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINE 418
Query: 195 LVTGLDLNETCGILDTFIKR--GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR-L 251
L + E L ++ +Y L+ +L KA + + + + +R
Sbjct: 419 LCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSF 478
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
V +V SY+++ID FCK++ + RA ++ ++M D + PN+ T+N ++G + + +
Sbjct: 479 VPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQG 538
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
+ ++ G PD T++++I A + + A + M+ G PN +TYN L+ LC
Sbjct: 539 VYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLC 598
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
+ LF+KM PD T+ L+ FC + KIE+A + F M++ G PD
Sbjct: 599 KESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVV 658
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+Y+ L+K ++G+ EAKQ F M C PD+ + N++++ L + R ++A ++
Sbjct: 659 AYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEV 714
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/506 (24%), Positives = 224/506 (44%), Gaps = 48/506 (9%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F+ + K D FTYN L+ + R + +A ++ ++M G PN +TY +L+ C
Sbjct: 117 FRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCY 176
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLI-RFMEREPLTQKL 151
+ E R M ++ P+ +T+ V + F + R +E+ + +
Sbjct: 177 ERNSDEAVRFFGEMVDKGFKPS-STLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMM 235
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
+ LL A EA+ + R M G P+++ + Y V +L+E F
Sbjct: 236 LKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEA---FKLF 292
Query: 212 IKRGVKPRFS----TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
++ V+ + + + L K+G+ +E ++ L S+ Y+M+I +
Sbjct: 293 LEMAVESKAPLNNVAWTAFLSGLCKSGK-IEQAFEACRTMQESLSSSQPVYDMLIRLLIE 351
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+D+A E C E+ R+I P+ T +++I CK V LL +++ G+ PD T
Sbjct: 352 SGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMAT 411
Query: 328 -------------------------------------FNSMIDCLCRAHRFEDALDCLSE 350
+NS+++ LC+A + A S
Sbjct: 412 HSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFST 471
Query: 351 MV-EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
MV E P+ ++Y+ILI C I ++ R+ +L+++M P++ T+NA + R
Sbjct: 472 MVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKG 531
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
+I A+ + M+ G PD +YS LI + + D+A + F +M GC P++ T N
Sbjct: 532 RIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYN 591
Query: 470 LILETLVQQGRFEEAHDIVKTSKERG 495
+L L ++ + +EAH++ + ERG
Sbjct: 592 CLLHGLCKESKPDEAHELFRKMVERG 617
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 212/470 (45%), Gaps = 11/470 (2%)
Query: 13 YNAVIDALVKSNSIDLAY--LKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
+ A + L KS I+ A+ + Q S+ +P Y++LI + G +D+A +
Sbjct: 308 WTAFLSGLCKSGKIEQAFEACRTMQESLSSSQP---VYDMLIRLLIESGRIDKAEEACLE 364
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
+ G P+ T +I C A RV +LE M +R CP+ AT L++ + +
Sbjct: 365 IAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADK 424
Query: 131 PHKAFELLIRFMERE---PLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDRGYLPESS 186
+A E L + M+R+ + N+LL L +A AI M +R ++P+
Sbjct: 425 IQEAQEFL-QGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVV 483
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
++ + +L + I P +TY + L + GR + +
Sbjct: 484 SYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEM 543
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+V +Y+ +I F D+A E+ M R PN VT+N L+ G CK+++
Sbjct: 544 VAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKP 603
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ EL ++E G PD+ T+ +++ C + E A++ EMV G P+ + YN L
Sbjct: 604 DEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCL 663
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM-LTLG 425
++ G + +LFQ M + + PD + N +I + +++ A + F M G
Sbjct: 664 LKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHG 723
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
PD +Y++LI L R EA + F +++ +PD + N++LE +
Sbjct: 724 CSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 210/443 (47%), Gaps = 5/443 (1%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+S S +Y+ +I L++S ID A +++ +P T + +I +C+ G VD AL
Sbjct: 335 LSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSAL 394
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER--NVCPNEATVRSLVH 123
L++ M GY P++ T+++LI+ C A ++ E L+ M + + + + SL++
Sbjct: 395 SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLN 454
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYL 182
+ + H+AF + + +V ++L A + ++M D +
Sbjct: 455 SLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 514
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P +T++ + L+ + + G+ + + G P TY L+ A + +
Sbjct: 515 PNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHEL 574
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ N +YN ++ CK + D A E+ R+M +R P+ VT+ TL+ G C
Sbjct: 575 FETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCN 634
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ + E+ ++ G PD +N ++ RA + +A MV P+T++
Sbjct: 635 VGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVS 694
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADR-ISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
+NI+I L + ++ +F++M+ D SPD+ T+N+LI C ++ +A K F +
Sbjct: 695 HNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEI 754
Query: 422 LTLGLRPDNFSYSALIKALIKSG 444
L L PD +++ L++A IK G
Sbjct: 755 DRLKLSPDPHAFNVLLEA-IKCG 776
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 109/231 (47%), Gaps = 11/231 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN ++ L K + D A+ F++M C PDR TY L++G C +G +++A
Sbjct: 582 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQA 641
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + +M G+ P+V Y L+ GF A + E ++ ++M R P+ + ++ G
Sbjct: 642 VEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDG 701
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + A E+ R + + LV N+L++ L SEA + +++ P
Sbjct: 702 LSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSP 761
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
+ F+ + + CGI+ F R P + +LMEA++ AG
Sbjct: 762 DPHAFNVLLEAI--------KCGIVYQFEIRFKDP--PAFNVLMEAMHAAG 802
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/473 (20%), Positives = 179/473 (37%), Gaps = 143/473 (30%)
Query: 166 ASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLL 225
EA R + R + + T++ + L+ DL + + + + +GV P TY +
Sbjct: 110 GGEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAV 169
Query: 226 LMEA---------------------------LYKA------------------GRDVE-- 238
L+++ LY+ GRD+E
Sbjct: 170 LVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKR 229
Query: 239 --------GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM---------------MDRAT 275
+N V +D+ + + ++ CK + +D A
Sbjct: 230 VAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAF 289
Query: 276 EICREMRDRDIAP-NLVTFNTLISGHCKDAEVHKTRE------------------LLVML 316
++ EM AP N V + +SG CK ++ + E L+ +L
Sbjct: 290 KLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLL 349
Query: 317 LECG----------------FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+E G +P T +S+I LC+A R + AL L M++ G P+
Sbjct: 350 IESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDM 409
Query: 361 ITYNILI-------------------------------------RSLCAIGDVARSLRLF 383
T+++LI SLC V ++ +F
Sbjct: 410 ATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIF 469
Query: 384 QKMQADR-ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
M ++R PD+ +++ LI FC+++++ +AEK + M+ L P+ +Y+A + L++
Sbjct: 470 STMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMR 529
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
GR +A+ + M GC+PD T + ++ + ++AH++ +T RG
Sbjct: 530 KGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRG 582
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
D +L F+ +QA D++T+N L+ R +++A + F M+ G+ P+ F+Y+
Sbjct: 109 DGGEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYA 168
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
L+++ DEA + F M G P S + E L G+
Sbjct: 169 VLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGK 214
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 125/519 (24%), Positives = 234/519 (45%), Gaps = 60/519 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P T +N +I AL S+ +D A F +M CKP+ FT+ IL+ G C+ G+ D+
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+ ME G PN Y ++ FC R + +++E M+E + P+ T S +
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Query: 125 V---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ + LD + F ME + N++ Y L +L+ G
Sbjct: 262 LCKEGKVLDASRIFS----DMELDEYLGLPRPNSITYNL-----------MLKGFCKVGL 306
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
L ++ T + ++ + +Y + ++ L + G+ +E +
Sbjct: 307 LEDAKT-------------------LFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + + ++ SYN+++D CK+ M+ A I M+ + P+ VT+ L+ G+C
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+V + LL ++ P+ +T N ++ L + R +A + L +M E G +T+
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRIS-----------------------PDIYTF 398
T NI++ LC G++ +++ + + M+ + PD+ T+
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+ L+ C+ + +A+ F M+ L+PD+ +Y+ I K G+ A + ME+
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
GC+ T N ++ L + + E H ++ KE+GIS
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGIS 626
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/510 (25%), Positives = 227/510 (44%), Gaps = 31/510 (6%)
Query: 3 FLGIS-PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
+LG+ P++ YN ++ K ++ A F+ + + +YNI + G+ R G
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKF 342
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
EA ++KQM G P++Y+Y IL+DG C +++ ++ +MK VCP+ T L
Sbjct: 343 IEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCL 402
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+HG A LL M L CN LL+ L SEA +LRKM ++GY
Sbjct: 403 LHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY 462
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGIL-----------------------DTFIKRGVKP 218
++ T + V L +L++ I+ D+ I+ P
Sbjct: 463 GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLP 522
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
TY L+ L KAGR E + ++L + +YN+ I FCK + A +
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVL 582
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
++M + +L T+N+LI G ++ + L+ + E G P+ T+N+ I LC
Sbjct: 583 KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEG 642
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ-KMQADRISPDIYT 397
+ EDA + L EM++ + PN ++ LI + C + D + +F+ + +Y+
Sbjct: 643 EKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYS 702
Query: 398 --FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
FN L+ + ++ KA + ++L G F Y L+++L K + A
Sbjct: 703 LMFNELLAA----GQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHK 758
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
M G D +++ L + G +EA+
Sbjct: 759 MIDRGYGFDPAALMPVIDGLGKMGNKKEAN 788
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/502 (24%), Positives = 214/502 (42%), Gaps = 64/502 (12%)
Query: 15 AVIDALVKSNSIDLAYLKFQ--QMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+V+ KSN ID A+ +FQ + + KP + YN+L+ + V+ L K M
Sbjct: 80 SVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMV 139
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G AP YT+ +LI C++ V + + M E+ PNE T LV G +
Sbjct: 140 LCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTD 199
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
K ELL L K++ NT++ ++ ++ KM + G +P+ TF+ +
Sbjct: 200 KGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRI 259
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+ AL K G+ ++ R + + D +
Sbjct: 260 S-----------------------------------ALCKEGKVLDASRIFSDMELDEYL 284
Query: 253 S----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
N +YN+++ FCKV +++ A + +R+ D +L ++N + G + + +
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIE 344
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+L + + G P +++N ++D LC+ DA + M GV P+ +TY L+
Sbjct: 345 AETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLH 404
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
C++G V + L Q+M + P+ YT N L+ S +M +I +AE+ M G
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGL 464
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSME-----------------------QNGCNPDS 465
D + + ++ L SG D+A + M +N C PD
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDL 524
Query: 466 YTSNLILETLVQQGRFEEAHDI 487
T + +L L + GRF EA ++
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKNL 546
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 115/288 (39%), Gaps = 46/288 (15%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P Y+ +++ L K+ A F +M ++ +PD YNI IH C+ G + A R+
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 68 VKQME----------------------------GL-------GYAPNVYTYTILIDGFCN 92
+K ME GL G +PN+ TY I C
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD---PHKAFELLIRFMEREPLTQ 149
++V + +L+ M ++N+ PN + + L+ + D + FE + ++
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLY 701
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT--VTCLVTGLDLNETCGI 207
L+ N LL +A +L + DRG+ E TF Y V L +L GI
Sbjct: 702 SLMFNELLAA----GQLLKATELLEAVLDRGF--ELGTFLYKDLVESLCKKDELEVASGI 755
Query: 208 LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNV 255
L I RG + + +++ L K G E + + + + + V V
Sbjct: 756 LHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEV 803
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 224/492 (45%), Gaps = 33/492 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S S + +IDA K+ +D A ++M + D Y LI G C G +D
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRG 266
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++ G +P TY LI GFC ++ E + E M ER V PN T L+ G
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG 326
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +LL +E++ + N ++ +L + + ++A I+ M R P+
Sbjct: 327 LCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD 386
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + L DL+E +L YL+L ++ Y
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLL--------------YLMLKDSSYTD----------- 421
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+V SYN +I CK N + +A +I + ++ A + VT N L++ K
Sbjct: 422 --------PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V+K EL + + + T+ +MID C+ A L +M + P+ YN
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ SLC G + ++ RLF++MQ D PD+ +FN +I + I+ AE M
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL PD F+YS LI +K G DEA F M +G PD++ + +L+ + QG ++
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKL 653
Query: 485 HDIVKTSKERGI 496
++VK ++ I
Sbjct: 654 TELVKKLVDKDI 665
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 229/487 (47%), Gaps = 37/487 (7%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N ++ L ++ A ++M + PD F+YN +I G C +++AL L +M+
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G G + ++ T+ ILID FC A ++ E L+ MK + + SL+ G C +
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+ L +ER + NTL+ R G L E+S
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLI----------------RGFCKLGQLKEASE----- 303
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
I + I+RGV+P TY L++ L G+ E + LN + +
Sbjct: 304 --------------IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE 349
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
N +YN++I+ CK ++ A EI M+ R P+ +T+N L+ G C ++ + +L
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Query: 313 LVMLLECG--FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
L ++L+ PD ++N++I LC+ +R ALD +VE + +T NIL+ S
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNST 469
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
GDV +++ L++++ +I + T+ A+I FC+ + A+ M L+P
Sbjct: 470 LKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSV 529
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
F Y+ L+ +L K G D+A + F M+++ PD + N++++ ++ G + A ++
Sbjct: 530 FDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVG 589
Query: 491 SKERGIS 497
G+S
Sbjct: 590 MSRAGLS 596
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 187/406 (46%), Gaps = 4/406 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F+G+ +Y ++I +D F ++ P TYN LI G C++G
Sbjct: 238 MKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQ 297
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ EA + + M G PNVYTYT LIDG C + E ++L +M E++ PN T
Sbjct: 298 LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNI 357
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDR 179
+++ + + A E++ +R + N LL L EA+ +L M D
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Query: 180 GYL-PESSTFDYTVTCLVTGLDLNETCGILDTFIKR-GVKPRFSTYLLLMEALYKAGRDV 237
Y P+ +++ + L L++ I D +++ G R +T +LL L KAG
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTL-KAGDVN 476
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ + ++V N ++Y +ID FCK M++ A + +MR ++ P++ +N L+
Sbjct: 477 KAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLL 536
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
S CK+ + + L + PD +FN MID +A + A L M G+
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLS 596
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
P+ TY+ LI +G + ++ F KM PD + +++++
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 130/241 (53%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV ++N+++ C+ +A + REMR + P++ ++NT+I G C+ E+ K EL
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ G T+ +ID C+A + ++A+ L EM G+ + + Y LIR C
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G++ R LF ++ SP T+N LI+ FC++ ++++A + F M+ G+RP+ ++Y
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ LI L G+ EA Q M + P++ T N+I+ L + G +A +IV+ K+
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 494 R 494
R
Sbjct: 381 R 381
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 107/218 (49%)
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
R+M + D N V+ + L+ + + + +L ++L+ GF + + N ++ LCR
Sbjct: 96 RKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRN 155
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
A+ L EM + P+ +YN +IR C ++ ++L L +M+ S + T+
Sbjct: 156 LECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTW 215
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
LI +FC+ K+++A M +GL D Y++LI+ G D K F + +
Sbjct: 216 GILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLE 275
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G +P + T N ++ + G+ +EA +I + ERG+
Sbjct: 276 RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 152/337 (45%), Gaps = 10/337 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ YN +I+ L K + A + M + +PD TYNIL+ G+C G +DEA +L
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Query: 68 VKQM-EGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M + Y P+V +Y LI G C R+ + + +++ E+ + T L++
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNST 469
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ D +KA EL + + + + ++ M + A +L KM R +
Sbjct: 470 LKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM--RVSELQP 527
Query: 186 STFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
S FDY CL++ L L++ + + + P ++ ++++ KAG +
Sbjct: 528 SVFDY--NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAES 585
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + + L ++ +Y+ +I+ F K+ +D A +M D P+ ++++
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCI 645
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
E K EL+ L++ DK +++D +C +
Sbjct: 646 SQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNS 682
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ PS YN ++ +L K S+D A+ F++M D PD ++NI+I G + G + A
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L+ M G +P+++TY+ LI+ F + E + M + P+ S++
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644
Query: 126 FRCLDPHKAFELLIRFMERE-PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+ K EL+ + ++++ L ++L C + Y ++++ A +LR D+
Sbjct: 645 ISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTDDK 699
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/477 (26%), Positives = 212/477 (44%), Gaps = 38/477 (7%)
Query: 24 NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTY 83
N+ID A F +M Q P +N L+ I ++ L L QM+ G PN+YT
Sbjct: 40 NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99
Query: 84 TILIDGFC--NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF 141
ILI+ FC N ++ E + + M P+ T +L++G+ + + A LL
Sbjct: 100 HILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSM 159
Query: 142 MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
+++ NT++ L + +EA + +M
Sbjct: 160 VQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM------------------------- 194
Query: 202 NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
+ +G+ P TY L+ AL LN + +++ +V S+N V
Sbjct: 195 ----------VTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 244
Query: 262 IDCFCKVNMMDRATEICREMRDRD-IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
+D CK + A ++ +M R PN++++NTLI+G+CK + K L +
Sbjct: 245 VDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 304
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
PD T++++I LC R +DA+ EMV PN +TY IL+ LC +A ++
Sbjct: 305 LIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAM 364
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
L + ++ + PDI N I CR ++E A F ++ + GL+PD ++YS +I L
Sbjct: 365 ALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGL 424
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ G DEA + F M++NGC + N I ++ A +++ RG S
Sbjct: 425 CRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFS 481
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 210/484 (43%), Gaps = 36/484 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRI--GVVDEAL 65
PST +N ++ ++ K QM P+ +T +ILI+ C + G + EAL
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEAL 118
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L +M G G+ P+V TY LI+G C + R+L M ++N PN +++ +
Sbjct: 119 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 178
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ +AF L + + N+L++ L N A +L +M D +P+
Sbjct: 179 CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 238
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+F+ V L + E ++D I+RG
Sbjct: 239 VSFNTVVDALCKEGKVTEAHDVVDKMIQRG------------------------------ 268
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ NV SYN +I+ +CK+ +D+A + EM +++ P+ VT++TLI G C
Sbjct: 269 ----GCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVER 324
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ L ++ C P+ T+ ++D LC+ +A+ L + + P+ NI
Sbjct: 325 LQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNI 384
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
I +C G++ + LF + + + PD++T++ +I CR +++A K F M G
Sbjct: 385 AIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 444
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ Y+ + + +++ A Q M G + D+ T L ++ L G +
Sbjct: 445 CTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLK 504
Query: 486 DIVK 489
I++
Sbjct: 505 QILR 508
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 161/400 (40%), Gaps = 36/400 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y +I+ L K + A M C+P+ F YN +I +C+ V EA
Sbjct: 128 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 187
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +M G +P+++TY LI CN V +L M + + P+ +
Sbjct: 188 FNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSF------ 241
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY-LP 183
NT++ L +EA ++ KM RG +P
Sbjct: 242 -----------------------------NTVVDALCKEGKVTEAHDVVDKMIQRGGCMP 272
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+++ + +++ + ++ + P TY L+ L R +
Sbjct: 273 NVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALF 332
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + N+ +Y +++D CK + A + + + ++ P++ N I G C+
Sbjct: 333 HEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRA 392
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E+ R+L L G +PD +T++ MI+ LCR ++A EM E G N Y
Sbjct: 393 GELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIY 452
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
N + R + +R+++L Q+M A S D T ++
Sbjct: 453 NTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVK 492
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 99/232 (42%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN +I+ K ID A F +M + PD TY+ LIHG+C + + +A
Sbjct: 269 GCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDA 328
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +M PN+ TY IL+D C + +AE +L+ ++ N+ P+ + G
Sbjct: 329 IALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDG 388
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R + A +L + + ++ L + EA+ + R+M + G
Sbjct: 389 MCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLN 448
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
++ + + + +L + RG ST L ++ L G D
Sbjct: 449 GCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLD 500
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 217/496 (43%), Gaps = 42/496 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCK---PDRFTYNILIHGICRIGVV 61
G+ PS N ++ +LV++ F + CK PD + + I+ C+ G V
Sbjct: 213 GMFPSKTTCNILLTSLVRATEFQKCCEAFHVV----CKGVSPDVYLFTTAINAFCKGGKV 268
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
+EA+ L +ME G PNV TY +IDG + R E F E M ER V P T L
Sbjct: 269 EEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSIL 328
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
V G L+ +A +L++M ++G+
Sbjct: 329 VKG-----------------------------------LTKAKRIGDAYCVLKEMTEKGF 353
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P ++ + L+ LN+ I D + +G+ STY L++ K+G+ +R
Sbjct: 354 PPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAER 413
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + N S+ VI C +M D A EM R+++P TLISG C
Sbjct: 414 LLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 473
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + K EL + L GF D T N+++ LC A + E+ E++ G + +
Sbjct: 474 KHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRV 533
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
+YN LI C + + +M + PD YT++ LI+ MNK+E+A + +
Sbjct: 534 SYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDC 593
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G+ PD ++YS +I K+ R +E ++ F M N P++ N ++ + GR
Sbjct: 594 KRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRL 653
Query: 482 EEAHDIVKTSKERGIS 497
A ++ + K +GIS
Sbjct: 654 SMALELREDMKHKGIS 669
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 208/445 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ +YN +ID+L+++ S++ A M TYN LI G C+ G D A
Sbjct: 352 GFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIA 411
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL+K+M +G+ N ++T +I C+ R + M RN+ P + +L+ G
Sbjct: 412 ERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISG 471
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + KA EL ++F+ + L N LL+ L E I +++ RG++ +
Sbjct: 472 LCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMD 531
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+++ ++ L+E +D +K+G+KP TY +L+ L + E ++
Sbjct: 532 RVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWG 591
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
++ ++ +V +Y+++ID CK + ++ EM ++ PN V +N LI +C+
Sbjct: 592 DCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSG 651
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ EL + G P+ T+ S+I + R E+A L EM G+ PN Y
Sbjct: 652 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYT 711
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI +G + + L ++M + + P+ T+ +I + R + +A + M
Sbjct: 712 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREK 771
Query: 425 GLRPDNFSYSALIKALIKSGRFDEA 449
G+ PD+ +Y I +K G +A
Sbjct: 772 GIVPDSITYKEFIYGYLKQGGVLQA 796
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/528 (24%), Positives = 231/528 (43%), Gaps = 37/528 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP L+ I+A K ++ A F +M P+ TYN +I G+ G DEA
Sbjct: 247 GVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEA 306
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++M G P + TY+IL+ G AKR+ + + VL+ M E+ PN +L+
Sbjct: 307 FMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDS 366
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +KA E+ + + NTL+ + A A +L++M G+
Sbjct: 367 LIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVN 426
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG-DRYL 243
+F + L + + + + R + P L+ L K G+ + + +L
Sbjct: 427 QGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWL 486
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ K LV S N ++ C+ ++ I +E+ R + V++NTLISG C +
Sbjct: 487 KFLNKGFLVDTKTS-NALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGN 545
Query: 304 AEV--------------------------------HKTRELLVMLLEC---GFKPDKFTF 328
++ +K E + +C G PD +T+
Sbjct: 546 KKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTY 605
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+ MID C+A R E+ EM+ + PNT+ YN LI + C G ++ +L L + M+
Sbjct: 606 SVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKH 665
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
ISP+ T+ +LI+ ++++E+A+ M GL P+ F Y+ALI K G+ +
Sbjct: 666 KGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 725
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ M +P+ T +++ + G EA ++ +E+GI
Sbjct: 726 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGI 773
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 1/181 (0%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G P K T N ++ L RA F+ + +V GV P+ + I + C G V +
Sbjct: 213 GMFPSKTTCNILLTSLVRATEFQKCCEAF-HVVCKGVSPDVYLFTTAINAFCKGGKVEEA 271
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+ LF KM+ + P++ T+N +I + ++A M+ G+ P +YS L+K
Sbjct: 272 IELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKG 331
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
L K+ R +A M + G P+ N ++++L++ G +A +I +G+S
Sbjct: 332 LTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLT 391
Query: 500 S 500
S
Sbjct: 392 S 392
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 1/152 (0%)
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
ALD + G+ P+ T NIL+ SL + + F + +SPD+Y F I
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFH-VVCKGVSPDVYLFTTAIN 260
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+FC+ K+E+A + F M G+ P+ +Y+ +I L SGR+DEA M + G P
Sbjct: 261 AFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEP 320
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
T +++++ L + R +A+ ++K E+G
Sbjct: 321 TLITYSILVKGLTKAKRIGDAYCVLKEMTEKG 352
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 231/497 (46%), Gaps = 1/497 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ G P+ YNA++DALV + D A+ + +M PD T+ + I C G
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
ALRL++ + G Y ++ G + + + M R+V P+ AT +
Sbjct: 61 PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++H + + D ++ LL + ++R K CN + L EA A++ M D
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAY 179
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T++ + L + E L + +G P TY +++ K E
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L V + +Y +I+ C ++RA E+ E + +D+ P+LV +N+L+ G
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ + +++ ++E G PD +T+N +I+ LC+ DA +++ + G P+
Sbjct: 300 CRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDV 359
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
T+N +I C + +L+L ++M I+PD T+N+++ C+ K ++ + F
Sbjct: 360 FTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEE 419
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ G RP+ +Y+ LI+ K + +EA + M Q+G PD+ + N ++ + G
Sbjct: 420 MILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGD 479
Query: 481 FEEAHDIVKTSKERGIS 497
+ A+ + + E+G S
Sbjct: 480 LDGAYLLFQKLDEKGYS 496
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/499 (24%), Positives = 223/499 (44%), Gaps = 36/499 (7%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F +M PD T+N ++H +C+ G + E+ L+ ++ G + N +T I I G C
Sbjct: 103 FDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCE 162
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
R+ E ++E M + + P+ T +L+ G+ + +A + L R M + +
Sbjct: 163 GGRLEEAVALVESM-DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFT 221
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
NT++ M EA +L+ +G++P+ T+ + L D+ + +
Sbjct: 222 YNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQ 281
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+ +KP Y L++ L + G + + +N + +D ++ +YN+VI+ CK+ +
Sbjct: 282 AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNIS 341
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + + + P++ TFNT+I G+CK ++ +L+ + G PD T+NS++
Sbjct: 342 DAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVL 401
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
+ LC+A + ++ + EM+ G PN ITYNILI + C I + + + +M D +
Sbjct: 402 NGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLV 461
Query: 393 PDIYTFNALIQSFCRMNKIEK-----------------------------------AEKA 417
PD +FN LI FCR ++ AEK
Sbjct: 462 PDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKI 521
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F M++ G +PD ++Y L+ K+ D A M G P T +L +L
Sbjct: 522 FGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAM 581
Query: 478 QGRFEEAHDIVKTSKERGI 496
R EA I+ G+
Sbjct: 582 NHRVSEAVAIIHIMVRMGV 600
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 191/424 (45%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P YN ++ L K + + A ++M C PD FTYN +I G C+ ++ EA
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L+K G+ P+ TY LI+G C V + + +++ P+ SLV G+
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
R A +++ +E N ++ L S+AA ++ +GYLP+
Sbjct: 300 CRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDV 359
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
TF+ + L L+ +++ G+ P TY ++ L KAG+ E +
Sbjct: 360 FTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEE 419
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ N +YN++I+ FCK+N ++ A+ + M + P+ ++FNTLI G C++ +
Sbjct: 420 MILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGD 479
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ L L E G+ TFN +I + A EM+ G P+ TY +
Sbjct: 480 LDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRV 539
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L+ C +V R+ +M + P + TF ++ S +++ +A M+ +G
Sbjct: 540 LVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMG 599
Query: 426 LRPD 429
+ P+
Sbjct: 600 VVPE 603
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/542 (22%), Positives = 241/542 (44%), Gaps = 63/542 (11%)
Query: 8 PSTRLYNAVIDALVKSNSID-----LAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
P +N V+ AL + I LA + + MSV+ +FT NI I G+C G ++
Sbjct: 113 PDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVN-----KFTCNIWIRGLCEGGRLE 167
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA+ LV+ M+ AP+V TY L+ G C +V E + L M + P++ T +++
Sbjct: 168 EAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTII 226
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G + +A ELL + + + ++ +L+ L A + + +
Sbjct: 227 DGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLK 286
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ ++ V L + +++ ++ G P TY +++ L K G +
Sbjct: 287 PDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVV 346
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+N + +V ++N +ID +CK +D A ++ M IAP+ +T+N++++G CK
Sbjct: 347 MNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCK 406
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + E ++ G +P+ T+N +I+ C+ ++ E+A + M + G+ P+TI+
Sbjct: 407 AGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTIS 466
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQ--------------------------ADRI----- 391
+N LI C GD+ + LFQK+ A++I
Sbjct: 467 FNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMI 526
Query: 392 ----SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
PD+YT+ L+ C+ +++A M++ G P ++ ++ +L + R
Sbjct: 527 SKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVS 586
Query: 448 EAKQTFLSMEQNGCNPDSYTS------------NLILETLVQQGR-----FEEAHDIVKT 490
EA M + G P+ + +++E L+++G +E H+ V+
Sbjct: 587 EAVAIIHIMVRMGVVPEVVDTILSTDKKEIAAPKILVEELMKKGHISYPTYEVLHEGVRD 646
Query: 491 SK 492
+K
Sbjct: 647 NK 648
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 134/304 (44%), Gaps = 2/304 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN VI+ L K +I A + V PD FT+N +I G C+ +D A
Sbjct: 319 GCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSA 378
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+LV++M G AP+ TY +++G C A + EV E M + PN T L+
Sbjct: 379 LQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIEN 438
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +++R + + + NTL++ N A + +K+ ++GY
Sbjct: 439 FCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSAT 498
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ TF+ + + L++ I I +G KP TY +L++ KA +L
Sbjct: 499 ADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLA 558
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ V ++ ++ V++ + + A I M + P +V +T++S K+
Sbjct: 559 EMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVV--DTILSTDKKEI 616
Query: 305 EVHK 308
K
Sbjct: 617 AAPK 620
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%)
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
+G PP YN ++ +L ++ +++ +M + ++PD T I+SFC +
Sbjct: 4 FGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHV 63
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A + S+ G +Y +++ L G +A+ F M + PD T N +L
Sbjct: 64 ALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLH 123
Query: 474 TLVQQGRFEEAHDIVKTSKERGISFKSF 501
L Q+G E+ ++ +RG+S F
Sbjct: 124 ALCQKGDIMESGALLAKVLKRGMSVNKF 151
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 143/560 (25%), Positives = 234/560 (41%), Gaps = 68/560 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P T YN +I A K S+ +A+ F + + D +T N L+ G CR + +A
Sbjct: 174 GLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKA 233
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M +G N Y+YTILI G C A+ V E ++ +M N T L+ G
Sbjct: 234 CWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKG 293
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + H A LL R + N ++ + +A I M G P+
Sbjct: 294 LCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPD 353
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST---------------------- 222
T++ + L G L+E +L+ I RG P T
Sbjct: 354 DWTYNSLIYGLCGG-KLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKS 412
Query: 223 -------------YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
Y +L+ L K R E LN +F + L NV +Y +ID +CKV
Sbjct: 413 NMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVG 472
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
M+ A E+ + M PN T+ +LI G +D ++HK L+ + E G P T+
Sbjct: 473 MVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYT 532
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR-------- 381
++I C+ H F++A M + G+ P+ YN+L +LC G +
Sbjct: 533 TLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVV 592
Query: 382 ------------------------LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
L +KM + D+YT++ L+Q+ C+ K+ +A
Sbjct: 593 LTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSI 652
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
M G++ + +Y+ +I +IK G+ D AK F M +G P + T + + + +
Sbjct: 653 LDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCK 712
Query: 478 QGRFEEAHDIVKTSKERGIS 497
GR EEA ++ + G++
Sbjct: 713 IGRIEEAEHLIGEMERDGVT 732
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 132/552 (23%), Positives = 226/552 (40%), Gaps = 68/552 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ T NA++ +++ + A M + C+ + ++Y ILI G+C V EA
Sbjct: 209 GMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREA 268
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L LV M G + N++TYT+LI G C R+ + +L+ M R V P+ T +++ G
Sbjct: 269 LVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDG 328
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A + + N+L+Y L + EA +L RG+ P
Sbjct: 329 YCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKL-DEAEELLNGAIARGFTPT 387
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + +++ + I K Y +L+ L K R E LN
Sbjct: 388 VITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLN 447
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR------------------------- 279
+F + L NV +Y +ID +CKV M+ A E+ +
Sbjct: 448 EMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDK 507
Query: 280 ----------EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+M++ I P ++T+ TLI G CK E L M+ + G PD+ +N
Sbjct: 508 KLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYN 567
Query: 330 SMIDCLCRAHRFEDALDCL--------------------------------SEMVEWGVP 357
+ D LC++ R E+A L +MV G
Sbjct: 568 VLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCK 627
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
+ TY++L+++LC + +L + +M + +I + +I + K + A+
Sbjct: 628 ADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSL 687
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F M++ G +P +Y+ I + K GR +EA+ ME++G PD T N+ +
Sbjct: 688 FNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGH 747
Query: 478 QGRFEEAHDIVK 489
G + A +K
Sbjct: 748 MGYIDRAFSTLK 759
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 207/473 (43%), Gaps = 4/473 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS YNA+ID KS + A M + C PD +TYN LI+G+C G +DEA
Sbjct: 314 GVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEA 372
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ G+ P V T+T LI+G+C A+R+ + RV M N + L++
Sbjct: 373 EELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINV 432
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A E L + +++ M A + + M G P
Sbjct: 433 LIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPN 492
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T+ + L+ L++ ++ + G+ P TY L++ K R
Sbjct: 493 AWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFE 552
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ L + +YN++ D CK RA E + + + VT+ +L+ G K
Sbjct: 553 MMEQNGLTPDEQAYNVLTDALCKSG---RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAG 609
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
L+ ++ G K D +T++ ++ LC+ + +AL L +M GV N + Y
Sbjct: 610 NTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYT 669
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+I + G + LF +M + P T+ I S+C++ +IE+AE M
Sbjct: 670 IIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERD 729
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
G+ PD +Y+ I G D A T M C P+ +T L+L+ ++
Sbjct: 730 GVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLK 782
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/522 (22%), Positives = 218/522 (41%), Gaps = 54/522 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ Y ++ID K + A F+ M + C P+ +TY LI+G+ + + +A
Sbjct: 453 GLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKA 512
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M+ G P V TYT LI G C FR+ E+M++ + P+E L
Sbjct: 513 MALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDA 572
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A+ L+R + + K+ +L+ S AA ++ KM + G +
Sbjct: 573 LCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKAD 629
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L LNE ILD GVK Y +++ + K G+ N
Sbjct: 630 LYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFN 689
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG----- 299
+ + +Y + I +CK+ ++ A + EM + P++VT+N I+G
Sbjct: 690 EMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMG 749
Query: 300 ---------------------------------------HCKDA-------EVHKTRELL 313
H D E++ +LL
Sbjct: 750 YIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLL 809
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+++ G P T++S+I C+A R E+A L M+ + PN Y +LI+ C I
Sbjct: 810 ERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDI 869
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
+++ M P + +++ LI C ++A+ F +L + + ++
Sbjct: 870 KLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAW 929
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
L L+K+G D Q +M+ C DS + +++ +++
Sbjct: 930 KILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSI 971
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 202/447 (45%), Gaps = 13/447 (2%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
YN+ + + R + + +L + G P+ TY +I +C +A R +++
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
E + + T +L+ G R D KA LL+ + L+ L
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVR 266
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTY 223
EA ++ M G S +T T L+ GL +++ G+LD RGV P TY
Sbjct: 267 EALVLVFMMVHDG----CSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTY 322
Query: 224 LLLMEALYKAGR--DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+++ K+GR D G + L + ++ + +YN +I C +D A E+
Sbjct: 323 NAMIDGYCKSGRMKDALGIKAL--MEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGA 379
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
R P ++TF LI+G+CK + + ++ K D + +I+ L + R
Sbjct: 380 IARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRL 439
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
++A + L+EM G+ PN +TY +I C +G V +L +F+ M+ + P+ +T+ +L
Sbjct: 440 KEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSL 499
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I + K+ KA M G+ P +Y+ LI+ K FD A + F MEQNG
Sbjct: 500 IYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGL 559
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIV 488
PD N++ + L + GR EEA+ +
Sbjct: 560 TPDEQAYNVLTDALCKSGRAEEAYSFL 586
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 1/261 (0%)
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
V+ + + V RLV + YN+ + + +M + ++ + + P+ VT+NT+
Sbjct: 126 VDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTM 185
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
I +CK + +L E G + D +T N+++ CR A L M G
Sbjct: 186 IMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGC 245
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
N +Y ILI+ LC V +L L M D S +++T+ LI+ C+ +I A
Sbjct: 246 RRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARG 305
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
M G+ P ++Y+A+I KSGR +A MEQNGCNPD +T N ++ L
Sbjct: 306 LLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC 365
Query: 477 QQGRFEEAHDIVKTSKERGIS 497
G+ +EA +++ + RG +
Sbjct: 366 -GGKLDEAEELLNGAIARGFT 385
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 356 VPPNTITYNILIRSLCAIGDVARSLR-LFQKMQADR--------ISPDIYTFNALIQSFC 406
P N Y+ L+ S+ + A +R +QA R +SP Y N ++S
Sbjct: 101 APAN---YDKLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCY--NLALRSLL 155
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R + E K + ++ GL PD +Y+ +I A K G A + F + ++G D+Y
Sbjct: 156 RFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTY 215
Query: 467 TSNLIL 472
T N +L
Sbjct: 216 TCNALL 221
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 218/496 (43%), Gaps = 37/496 (7%)
Query: 36 MSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR 95
M + C+ + ++Y ILI G+C V EAL L+ M G + N++TYT+LI G C R
Sbjct: 151 MPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGR 210
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIR-FMEREPLT-QKLVC 153
+ RVLE M R V P+ T +++ G C L I+ MER
Sbjct: 211 IHGARRVLEEMPLRGVVPSVWTYNAMIDGY--CKSGRMKDALGIKALMERNGCNPDDWTY 268
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
N L+Y L EA +L RG+ P TF + +++ + + +
Sbjct: 269 NILIYGLCGEK-PDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLS 327
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
K Y +L+ L K R E ++ +F + L NV Y +ID +CKV +
Sbjct: 328 SNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGA 387
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A E+ R M PN T+++LI G +D ++HK L+ + E G P T+ ++I
Sbjct: 388 ALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQ 447
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR------------ 381
C+ H F++A M + G+ P+ YN+L +LC G +
Sbjct: 448 GQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKV 507
Query: 382 --------------------LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
L +KM + D YT++ L+Q+ C+ K+ +A M
Sbjct: 508 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQM 567
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G++ + +Y+ +I +IK G+ D AK F M +G P + T + + + + G+
Sbjct: 568 TLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQI 627
Query: 482 EEAHDIVKTSKERGIS 497
EEA ++ + G++
Sbjct: 628 EEAEHLIGEMERDGVA 643
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/500 (24%), Positives = 219/500 (43%), Gaps = 29/500 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ +Y ++ID K + A F+ M + C+P+ +TY+ LI+G+ + + +A
Sbjct: 364 GLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKA 423
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M+ G P V TYT LI G C FR+ E+M++ + P+E L H
Sbjct: 424 MALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHA 483
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A+ L+R + + K+ +L+ S AA ++ KM + G +
Sbjct: 484 LCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKAD 540
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S T+ + L LNE ILD GVK Y +++ + K G+ N
Sbjct: 541 SYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFN 600
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +Y + I +CK+ ++ A + EM +AP++VT+N I+G
Sbjct: 601 EMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMG 660
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMID-----CLCRAH-----------RFEDALDCL 348
+ + L +++ +P+ +T+ ++ L AH + L
Sbjct: 661 YMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLL 720
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
MV+ G+ P +TY+ +I C + + LF M+ ISP+ + LI+ C +
Sbjct: 721 ERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDI 780
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF---LSMEQNGCNPDS 465
KA M+ G +P SY LI L G +D+AK F L ME
Sbjct: 781 KLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMED------- 833
Query: 466 YTSNLILETLVQQGRFEEAH 485
Y N + ++ G + H
Sbjct: 834 YNHNEVAWKILNDGLLKAGH 853
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/532 (24%), Positives = 226/532 (42%), Gaps = 57/532 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS YNA+ID KS + A M + C PD +TYNILI+G+C DEA
Sbjct: 225 GVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCG-EKPDEA 283
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN-------------- 110
L+ G+ P V T+T +I+G+C A+R+ + RV M N
Sbjct: 284 EELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINV 343
Query: 111 ---------------------VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPL-T 148
+ PN S++ G + A E+ R ME E
Sbjct: 344 LIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVF-RLMEHEGCRP 402
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
++L+Y L + +A A++ KM + G P T+ + + + +
Sbjct: 403 NAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF 462
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ + G+ P Y +L AL K+GR E +L V K +++ V +Y ++D F K
Sbjct: 463 EMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL--VRKGVVLTKV-TYTSLVDGFSKA 519
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
D A + +M + + T++ L+ CK ++++ +L + G K + +
Sbjct: 520 GNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAY 579
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+I + + + + A +EM+ G P+ TY + I S C IG + + L +M+
Sbjct: 580 TIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMER 639
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK------ 442
D ++PD+ T+N I M +++A M+ P+ ++Y L+K +K
Sbjct: 640 DGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDA 699
Query: 443 -----SGRF-----DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
SG + D Q M ++G NP + T + I+ + R EEA
Sbjct: 700 HYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEA 751
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 207/449 (46%), Gaps = 11/449 (2%)
Query: 52 IHGICRIGV-VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
I I R+G + +A L+ M +G N Y+YTILI G C + V E +L +M +
Sbjct: 131 IQAIRRVGGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDG 190
Query: 111 VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA 170
N T L+ G+ + H A +L R + N ++ + +A
Sbjct: 191 CSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDAL 250
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGL---DLNETCGILDTFIKRGVKPRFSTYLLLM 227
I M G P+ D+T L+ GL +E +L+ I RG P T+ ++
Sbjct: 251 GIKALMERNGCNPD----DWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNII 306
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
KA R + R + ++ +Y ++I+ K A E EM +A
Sbjct: 307 NGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLA 366
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
PN+V + ++I G+CK +V E+ ++ G +P+ +T++S+I L + + A+
Sbjct: 367 PNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMAL 426
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
+++M E G+ P ITY LI+ C + + RLF+ M+ + ++PD +N L + C+
Sbjct: 427 ITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCK 486
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+AE+A+ ++ G+ +Y++L+ K+G D A M GC DSYT
Sbjct: 487 SG---RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYT 543
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERGI 496
+++L+ L +Q + EA I+ G+
Sbjct: 544 YSVLLQALCKQKKLNEALSILDQMTLSGV 572
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 202/485 (41%), Gaps = 19/485 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P+ + +I+ K+ ID A M CK D Y +LI+ + + EA
Sbjct: 294 GFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEA 353
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
V +M G APNV YT +IDG+C +V V +M+ PN T SL++G
Sbjct: 354 KETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYG 413
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + HKA L+ + E + TL+ A + M G P+
Sbjct: 414 LIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPD 473
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ L E L +++GV TY L++ KAG +
Sbjct: 474 EQAYNVLTHALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIE 530
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++ +Y++++ CK ++ A I +M + N+V + +IS K+
Sbjct: 531 KMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEG 590
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + ++ G KP T+ I C+ + E+A + EM GV P+ +TYN
Sbjct: 591 KHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYN 650
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN--------------- 409
+ I +G + R+ ++M P+ +T+ L++ F +M+
Sbjct: 651 VFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNW 710
Query: 410 -KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+++ + M+ GL P +YS++I K+ R +EA F M +P+
Sbjct: 711 IELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIY 770
Query: 469 NLILE 473
++++
Sbjct: 771 TMLIK 775
>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Glycine max]
Length = 875
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 133/523 (25%), Positives = 238/523 (45%), Gaps = 31/523 (5%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F +SPS LYN ++ + ++ + + M + P +T+N+LIH +C D
Sbjct: 108 FPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFD 167
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC--PNEATVRS 120
AL+L ++M G PN +T IL+ G C R V + LE++ N C N +
Sbjct: 168 HALQLFEKMPQKGCCPNEFTLGILVRGLC---RAGLVKQALELVNNNNSCRIANRVVYNT 224
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
LV R ++A L+ R E L + N+ + L EA+ I R M
Sbjct: 225 LVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDA 284
Query: 181 YL----PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
L P TF+ + + + G+++T K G Y + + L + G
Sbjct: 285 ELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGEL 344
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
+E L+ + + N +YN+++D C+ +M+ A + M + P+ V ++TL
Sbjct: 345 LEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTL 404
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ G+C +V + + +L ++ G +P+ +T N+++ L + R +A + L +M E
Sbjct: 405 LHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCY 464
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS----------------------PD 394
P+T+T NI++ LC G++ ++ + +M + + PD
Sbjct: 465 QPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPD 524
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
T+ LI C++ ++E+A+K F ML LRPD+ +Y I + K G+ A +
Sbjct: 525 GITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLK 584
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
ME+NGC+ T N ++ L + E + + KE+GIS
Sbjct: 585 DMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGIS 627
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 148/591 (25%), Positives = 248/591 (41%), Gaps = 96/591 (16%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P T +N +I +L +S + D A F++M C P+ FT IL+ G+CR G+V +AL
Sbjct: 146 VAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQAL 205
Query: 66 ----------------------------------RLVKQMEGLGYAPNVYTYTILIDGFC 91
RLV++M LG P+V T+ I C
Sbjct: 206 ELVNNNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALC 265
Query: 92 NAKRVAE---VFRVLEIMKERNVC-PNEAT----------------VRSLVH-----GVF 126
A +V E +FR +++ E + PN T R LV G F
Sbjct: 266 RAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNF 325
Query: 127 RCLDPHKAF--------ELL-IRFMEREPLTQKLVCNTLLYR-----LSNNSMASEAAAI 172
L+ + + ELL R + E + + + N Y L N M S+A +
Sbjct: 326 DSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGL 385
Query: 173 LRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK 232
+ M G P++ + + + + E +L I+ G +P T L+ +L+K
Sbjct: 386 MDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWK 445
Query: 233 AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR-------- 284
GR +E + L + + + + N+V++ C+ +D+A+EI EM
Sbjct: 446 EGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKG 505
Query: 285 --------------DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+ P+ +T+ TLI+G CK + + ++ + +L +PD T+++
Sbjct: 506 NSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDT 565
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
I C+ + A L +M G TYN LI L + + L +M+
Sbjct: 566 FIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKG 625
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
ISPDI T+N +I C K + A ML G+ P+ S+ LIKA KS F A
Sbjct: 626 ISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVAC 685
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ F + N C +L+ L+ G+ EA ++ + S +R ++ K+F
Sbjct: 686 ELF-EVALNICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNF 735
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 215/488 (44%), Gaps = 20/488 (4%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
S YN + L+++ + A L +M +P+ +TYNI++ G+CR ++ +A L+
Sbjct: 327 SLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLM 386
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
M G P+ Y+ L+ G+C+ +V E VL M PN T +L+H +++
Sbjct: 387 DLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKE 446
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+A E+L + E+ + CN ++ L N +A+ I+ +M G P S
Sbjct: 447 GRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNG--PTSLDK 504
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ L+ + C P TY L+ L K GR E + +
Sbjct: 505 GNSFASLINSIHNVSNC-----------LPDGITYTTLINGLCKVGRLEEAKKKFIEMLA 553
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
L + +Y+ I FCK + A + ++M + L T+N LI G + ++ +
Sbjct: 554 KNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFE 613
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
L + E G PD T+N++I CLC + +DA+ L EM++ G+ PN ++ ILI+
Sbjct: 614 IYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIK 673
Query: 369 SLCAIGDVARSLRLFQ-KMQADRISPDIYT--FNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+ D + LF+ + +Y+ FN L+ ++ +A++ F L
Sbjct: 674 AFSKSSDFKVACELFEVALNICGRKEALYSLMFNELLAG----GQLSEAKELFEVSLDRY 729
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
L NF Y LI L + R +A + G D + +++ L ++G +A
Sbjct: 730 LTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQAD 789
Query: 486 DIVKTSKE 493
++ K E
Sbjct: 790 ELAKRMME 797
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 68/128 (53%), Gaps = 2/128 (1%)
Query: 366 LIRSLCAIGDVARSLRLFQKMQAD--RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
++R L +G V ++ F+ ++A +SP + +N L++S R ++ + ML
Sbjct: 84 MVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLA 143
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+ P ++++ LI +L +S FD A Q F M Q GC P+ +T +++ L + G ++
Sbjct: 144 ARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQ 203
Query: 484 AHDIVKTS 491
A ++V +
Sbjct: 204 ALELVNNN 211
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 223/496 (44%), Gaps = 39/496 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++I VK +D A+ F +M P N +I +C++ +D+A
Sbjct: 44 GLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKA 102
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+V++M G AP+++TY+++IDG C +K + + RVLE M E PN T SL+HG
Sbjct: 103 ESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHG 162
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
Y +S M +E+ + ++M G +P
Sbjct: 163 ---------------------------------YSIS--GMWNESVRVFKQMSSCGVIPT 187
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY-- 242
+ + L NE I D+ + +G KP +Y ++ A D +
Sbjct: 188 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 247
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
N + + N + +N++I+ + + MMD+A I +M+++ + P+ VTF T+IS C+
Sbjct: 248 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 307
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ +++ G P + + +I C A + +SEM+ +PP +
Sbjct: 308 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 367
Query: 363 Y-NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y + +I +LC G VA + M P++ TFN+L++ +C + +E+A +M
Sbjct: 368 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAM 427
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
++G+ P+ + Y L+ K+GR D+A F M G P S ++IL L Q R
Sbjct: 428 ASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRT 487
Query: 482 EEAHDIVKTSKERGIS 497
A + E G +
Sbjct: 488 TAAKKMFHEMIESGTT 503
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/537 (24%), Positives = 238/537 (44%), Gaps = 44/537 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P Y+ +ID L KS ++D A +QM +P+ TYN LIHG G+ +E+
Sbjct: 113 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 172
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+R+ KQM G P V I R E + + M + P+ + +++HG
Sbjct: 173 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 232
Query: 125 VF----RCL-DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
CL D H F L+ + + K V N L+ + M +A I M ++
Sbjct: 233 YATATDSCLADVHNIFNLM---LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 289
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEA---------- 229
G +P++ TF ++ L L++ + + GV P + Y L++
Sbjct: 290 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 349
Query: 230 --------------------------LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
L K GR EG ++ + + NV ++N +++
Sbjct: 350 KELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLME 409
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
+C V M+ A + M I PN + TL+ G+CK+ + + +L G KP
Sbjct: 410 GYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 469
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
++ ++ L +A R A EM+E G + TY +++ LC + L
Sbjct: 470 TSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLL 529
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+K+ A + DI TFN +I + ++ + ++A++ F ++ T GL P+ +YS +I LIK
Sbjct: 530 EKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKE 589
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
++EA F+S+E++G DS N I+ L+ + +A + + E ++ ++
Sbjct: 590 ESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEA 646
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 193/428 (45%), Gaps = 11/428 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P+ ++N +I+A + +D A L F+ M PD T+ +I +CRIG +D+A
Sbjct: 255 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 314
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT-VRSLVH 123
L M +G P+ Y LI G CN + + ++ M +++ P S+++
Sbjct: 315 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 374
Query: 124 GV---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLL--YRLSNNSMASEAAAILRKMGD 178
+ R + +++++ +R + + N+L+ Y L N EA A+L M
Sbjct: 375 NLCKEGRVAEGKDIMDMMVQTGQRPNV---VTFNSLMEGYCLVGN--MEEAFALLDAMAS 429
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P + V +++ + + +GVKP Y +++ L++A R
Sbjct: 430 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA 489
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + + ++++Y +V+ C+ N D A + ++ ++ +++TFN +IS
Sbjct: 490 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 549
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
K + +EL + G P+ T++ MI L + +E+A + + + G
Sbjct: 550 AMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHAS 609
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
++ N ++R L +VA++ + + ++ + T + L F R K + K
Sbjct: 610 DSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 669
Query: 419 FSMLTLGL 426
+ +T+ +
Sbjct: 670 PANMTMAV 677
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 141/308 (45%), Gaps = 38/308 (12%)
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
R P TY +L++ + R G + + K+ L + SY+++ F K +D+
Sbjct: 8 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG-FVKDGEVDK 66
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + EM ++ + P ++ N++I CK E+ K ++ +++ G PD FT++ +ID
Sbjct: 67 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 126
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
LC++ + A L +MVE G PN+ITYN LI G S+R+F++M + + P
Sbjct: 127 GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIP 186
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA------------------ 435
+ N+ I + + + +A+ F SM+ G +PD SYS
Sbjct: 187 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN 246
Query: 436 -------------------LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
LI A + G D+A F M+ G PD+ T ++ +L
Sbjct: 247 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 306
Query: 477 QQGRFEEA 484
+ GR ++A
Sbjct: 307 RIGRLDDA 314
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 34/174 (19%)
Query: 357 PPNTITYNILI-------RSLCAIGDVARSLR---------------------------L 382
PP TYNILI R + V R L+ L
Sbjct: 11 PPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKAHCL 70
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
F +M + P I N++I+ C+M +++KAE M+ G+ PD F+YS +I L K
Sbjct: 71 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
S D+A++ M + G P+S T N ++ G + E+ + K G+
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGV 184
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 234/497 (47%), Gaps = 3/497 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS Y +++A+ KS+ A +M C P+ TYN++I+G+CR G VD+A
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 241
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ ++ G+ P++ +YT ++ G C A+R +V + M ++ PNE T LV
Sbjct: 242 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 301
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R +A ++L + + +CN ++ + +A L MG G P+
Sbjct: 302 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 361
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ + L +L +++ P T+ + L + G + + +
Sbjct: 362 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIE 421
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + +YN ++ FC +D A E+ + PN +T+ TL++G C
Sbjct: 422 LMPEYGCSVGIVTYNALVHGFCVQGRVDSALEL---FNNLPCEPNTITYTTLLTGLCHAE 478
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ ELL +++ + TFN ++ C+ E+A++ +++M+E G PN IT+N
Sbjct: 479 RLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFN 538
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ + + +L L + + +S D T+++++ R ++ E+A + ++ +
Sbjct: 539 TLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDM 598
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+RP Y+ ++ AL K D+A F M NGC P+ T +++E L +G +EA
Sbjct: 599 GMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEA 658
Query: 485 HDIVKTSKERGISFKSF 501
++ +G+ KS
Sbjct: 659 RYVLSELYAKGVLSKSL 675
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 190/427 (44%), Gaps = 5/427 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G P Y V+ L + D + F +M +C P+ T+++L+ CR G+
Sbjct: 248 LSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGM 307
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V+ A+++++QM G PN I+I+ C RV + + L M P+ + +
Sbjct: 308 VERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTT 367
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ R A ELL + + ++ NT + L + +A ++ M + G
Sbjct: 368 VLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYG 427
Query: 181 YLPESSTFDYTVTCLVTGLDLNETC-GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
S T LV G + L+ F +P TY L+ L A R
Sbjct: 428 ----CSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAA 483
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L + + N ++N+++ FC+ ++ A E+ +M + PNL+TFNTL+ G
Sbjct: 484 AELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDG 543
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
KD + ELL L+ G D T++S++D L R R E+A+ L + + G+ P
Sbjct: 544 ITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPK 603
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
YN ++ +LC + +++ F M ++ P+ T+ LI+ +++A
Sbjct: 604 VGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLS 663
Query: 420 SMLTLGL 426
+ G+
Sbjct: 664 ELYAKGV 670
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 160/378 (42%), Gaps = 42/378 (11%)
Query: 159 RLSNNSMASEAAAILRK----MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
R S+ + A+ + R M RG P T+ + + E +LD +
Sbjct: 157 RPSSGASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAK 216
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G P TY +++ + + GR + LN + ++ SY V+ C D
Sbjct: 217 GCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDV 276
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE--C------------- 319
+ EM D+ PN VTF+ L+ C+ V + ++L + + C
Sbjct: 277 KVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINA 336
Query: 320 --------------------GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
G PD ++ +++ LCRA R+E A + L EMV PPN
Sbjct: 337 ICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPN 396
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+T+N I LC G + ++++L + M S I T+NAL+ FC +++ A + F
Sbjct: 397 EVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFN 456
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+ L P+ +Y+ L+ L + R D A + M Q C ++ T N+++ Q+G
Sbjct: 457 N---LPCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKG 513
Query: 480 RFEEAHDIVKTSKERGIS 497
EEA ++V E G +
Sbjct: 514 FVEEAMELVNQMMEHGCT 531
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 114/229 (49%), Gaps = 5/229 (2%)
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
C M R P++VT+ L+ CK + + +L + G P+ T+N +I+ +CR
Sbjct: 175 CSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCR 234
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
R +DA + L+ + +G P+ ++Y +++ LCA LF +M + P+ T
Sbjct: 235 EGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVT 294
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
F+ L++ FCR +E+A + M G P+ + +I A+ K GR D+A +M
Sbjct: 295 FDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMG 354
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIV-----KTSKERGISFKSF 501
GCNPD+ + +L L + GR+E A +++ K ++F +F
Sbjct: 355 MYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTF 403
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 138/494 (27%), Positives = 224/494 (45%), Gaps = 30/494 (6%)
Query: 22 KSNSIDLAYLKFQQMSVDQCKPDRFTY--NILIHGICRIGVVDEALRLVKQM--EGLGYA 77
++ +D ++L + ++ C R T+ NILI + R G VD+AL L+ +M +
Sbjct: 171 RAQMVDESFLVYNEL----CPSRRLTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFP 226
Query: 78 PNVYTYTILIDGFCNAKRVA------EVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
PN T I+ +V E+ ++ E V PN + L+ + R
Sbjct: 227 PNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRT 286
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
+A+++L M+ + + CN LL L +L +M + P TF
Sbjct: 287 DRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGIL 346
Query: 192 VTCLVTGLDLNETCGILDTFIKRG--------VKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ L ++E L+ F K V+P TY L++ L K GR EG +
Sbjct: 347 INHLCKFRRVDEA---LEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLV 403
Query: 244 NHV-FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + R + N +YN +ID +CK +M++ A E+ +M + PN+VT NTL+ G CK
Sbjct: 404 ERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCK 463
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ E + G K + T+ ++I C + E A++ EM+E G P+ I
Sbjct: 464 HGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIV 523
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y LI L G + R+ + KM+ SPDI +FN LI FCR NK+++A + M
Sbjct: 524 YYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEME 583
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G++PD +Y+ LI K+G F A + M + G P T ++ G +
Sbjct: 584 NAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLD 643
Query: 483 EA----HDIVKTSK 492
EA D+ TSK
Sbjct: 644 EAMKIFRDMSSTSK 657
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 222/484 (45%), Gaps = 44/484 (9%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
NA++ AL ++ +M +P+ T+ ILI+ +C+ VDEAL + ++M G
Sbjct: 309 NALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNG 368
Query: 74 L---GY--APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVHGVFR 127
G+ P+V TY LIDG C R E ++E M+ + C PN T L+ G +
Sbjct: 369 GESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCK 428
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
A EL + M ++ + +V NTL+ + + + A +M +G +
Sbjct: 429 ASMIEAARELFDQ-MNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAV 487
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + ++ + + D ++ G P Y L+ L +AG+
Sbjct: 488 TYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGK----------- 536
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+DRA+ + +M++ +P++V+FN LI+G C+ ++
Sbjct: 537 ------------------------LDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKL 572
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ E+L + G KPD T+N++I + F A + +MV+ G+ P +TY L
Sbjct: 573 DEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGAL 632
Query: 367 IRSLCAIGDVARSLRLFQKMQA-DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
I + C G++ ++++F+ M + ++ P+ +N LI S CR N+++ A M G
Sbjct: 633 IHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKG 692
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
++P+ +++A+ K L + +A + M ++ CNPD T ++ E L G +
Sbjct: 693 VKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLK 752
Query: 486 DIVK 489
V+
Sbjct: 753 SFVQ 756
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/466 (25%), Positives = 216/466 (46%), Gaps = 19/466 (4%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P+ LI +CR G D A ++ + LG + L+ A+ + +
Sbjct: 268 PNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTL 327
Query: 103 LEIMKERNVCPNEATVRSLVHGV--FRCLDPHKAFELLIRFMEREP---LTQK--LVCNT 155
L MKE ++ PN T L++ + FR +D +A E+ + E L + + NT
Sbjct: 328 LAEMKEMDIQPNVVTFGILINHLCKFRRVD--EALEVFEKMNGGESNGFLVEPDVITYNT 385
Query: 156 LLYRLSNNSMASEAAAILRKMGDRGY-LPESSTFDYTVTCLVTGL----DLNETCGILDT 210
L+ L E ++ +M + +P + T++ CL+ G + + D
Sbjct: 386 LIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYN----CLIDGYCKASMIEAARELFDQ 441
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
K GV P T L++ + K GR + N + L N +Y +I FC VN
Sbjct: 442 MNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNN 501
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+++A E+ EM + +P+ + + TLISG + ++ + +L + E GF PD +FN
Sbjct: 502 IEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNV 561
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I+ CR ++ ++A + L EM G+ P+ +TYN LI GD + + RL +KM +
Sbjct: 562 LINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEG 621
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSM-LTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ P + T+ ALI ++C +++A K F M T + P+ Y+ LI +L + + D A
Sbjct: 622 LVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLA 681
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
M+ G P++ T N + + L ++ +A +++ E
Sbjct: 682 LSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHA 727
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 165/375 (44%), Gaps = 2/375 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKPDRFTYNILIHGICRIGVVDEA 64
+ P YN +ID L K + ++M S +C P+ TYN LI G C+ +++ A
Sbjct: 376 VEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAA 435
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L QM G PNV T L+DG C R+ M+ + + N T +L+
Sbjct: 436 RELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRA 495
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KA EL +E +V TL+ LS A+ +L KM + G+ P+
Sbjct: 496 FCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPD 555
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+F+ + L+E +L G+KP TY L+ K G R +
Sbjct: 556 IVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMK 615
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD-IAPNLVTFNTLISGHCKD 303
+ K+ LV V +Y +I +C +D A +I R+M + PN V +N LI+ C+
Sbjct: 616 KMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRK 675
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V L+ + G KP+ TFN+M L + A + + M E P+ IT
Sbjct: 676 NQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITM 735
Query: 364 NILIRSLCAIGDVAR 378
IL L A+G+ A+
Sbjct: 736 EILTEWLSAVGETAK 750
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 145/306 (47%), Gaps = 6/306 (1%)
Query: 198 GLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNS 257
+D E G++ F + V P L+ L ++GR L+ + K V S
Sbjct: 248 AVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAAS 307
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML- 316
N ++ + R + EM++ DI PN+VTF LI+ CK V + E+ +
Sbjct: 308 CNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMN 367
Query: 317 --LECGF--KPDKFTFNSMIDCLCRAHRFEDALDCLSEM-VEWGVPPNTITYNILIRSLC 371
GF +PD T+N++ID LC+ R E+ L + M + PNT+TYN LI C
Sbjct: 368 GGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYC 427
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
+ + LF +M D + P++ T N L+ C+ +I A + F M GL+ +
Sbjct: 428 KASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAV 487
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
+Y+ALI+A ++A + F M + GC+PD+ ++ L Q G+ + A ++
Sbjct: 488 TYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKM 547
Query: 492 KERGIS 497
KE G S
Sbjct: 548 KEAGFS 553
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 137/336 (40%), Gaps = 44/336 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ N ++D + K I+ A F +M K + TY LI C + +++A
Sbjct: 446 GVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKA 505
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +M G +P+ Y LI G A ++ VL MKE P+ + L++G
Sbjct: 506 MELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLING 565
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R KL EA +L++M + G P+
Sbjct: 566 FCR--------------------KNKL---------------DEAYEMLKEMENAGIKPD 590
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ ++ D + ++ +K G+ P TY L+ A G E +
Sbjct: 591 GVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMK--- 647
Query: 245 HVFKD-----RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+F+D ++ N YN++I+ C+ N +D A + +M+ + + PN TFN + G
Sbjct: 648 -IFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKG 706
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
+ + K EL+ + E PD T + + L
Sbjct: 707 LQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWL 742
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 138/357 (38%), Gaps = 87/357 (24%)
Query: 227 MEALYK-AGRDVEGDRYLNHVFK----DRLVSNVNSYNMVIDCFCKVNMMDRA----TEI 277
+EA+++ A R+ L +FK ++ +VN+ ++I CF + M+D + E+
Sbjct: 126 LEAVFEHASREPNSHNKLLDLFKTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNEL 185
Query: 278 CREMR-------------------------------DRDIAPNLVTFNTLISGHCKDAEV 306
C R + PN T + + S K +V
Sbjct: 186 CPSRRLTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKV 245
Query: 307 HKT--RELLVMLL----ECGFKPDKFTFNSMIDCLCRAHRFEDALDC------------- 347
+ E +V L+ E P+ +I LCR+ R + A D
Sbjct: 246 GRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEA 305
Query: 348 ----------------------LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
L+EM E + PN +T+ ILI LC V +L +F+K
Sbjct: 306 ASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEK 365
Query: 386 MQADR-----ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG-LRPDNFSYSALIKA 439
M + PD+ T+N LI C++ + E+ M + P+ +Y+ LI
Sbjct: 366 MNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDG 425
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
K+ + A++ F M ++G P+ T N +++ + + GR A + + +G+
Sbjct: 426 YCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGL 482
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 216/479 (45%), Gaps = 37/479 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP+ Y ++D L K A + +M + + D TY ILIHG+CR G VD A
Sbjct: 259 GASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSA 318
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R+ M G +V Y LI GFC R E ++ + +
Sbjct: 319 ARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGI------------- 365
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDRGYLP 183
R+ T ++ LL ++ M SEA +L+++ D P
Sbjct: 366 -------------------RQITTYNIMTKGLL----DSGMVSEATELLKQLENDASCSP 402
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF + L N IL+ G + +Y ++ K GR + +
Sbjct: 403 DKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVY 462
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
++ KD N + YN +I+ FC+V+ ++ A +I EM P ++T+NTLI G CK
Sbjct: 463 KNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKA 522
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + L +LE GFKPD T+ S+I LCR + + AL E+++ G+ + + +
Sbjct: 523 EKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVH 582
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NILI LC+ G V + ++ +M+ SP++ T+N L+ F + I+KA + ++L
Sbjct: 583 NILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILD 642
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
GL+PD +Y+ IK L R E + G P T ++++ +++ G +
Sbjct: 643 NGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/503 (25%), Positives = 231/503 (45%), Gaps = 9/503 (1%)
Query: 2 SFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD----QCKPDRFTYNILIHGICR 57
S LG +P R +N ++DA V++ A F +S + P+ TYNI++ +C
Sbjct: 111 SLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCA 170
Query: 58 IGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
G VD A+ L + G AP+ TY+ L+ G ++ +L+ M V +
Sbjct: 171 RGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVC 230
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKM 176
+L+ G FR KA ++ + + + L +L L EA + +M
Sbjct: 231 YNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRM 290
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
+ ++ T+ + L D++ + +K G+ S Y L++ + GR
Sbjct: 291 MANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRT 350
Query: 237 VEGDRYLNHV-FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR-DRDIAPNLVTFN 294
E ++ + F + + +YN++ M+ ATE+ +++ D +P+ VTF
Sbjct: 351 GEAWKFWDSTGFSG--IRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFG 408
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
TLI G C++ ++ E+L G + D F+++SMI+ C+ R DA + MV+
Sbjct: 409 TLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKD 468
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G PN+ YN LI C + + +++++ +M ++ P I T+N LI C+ K ++A
Sbjct: 469 GCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEA 528
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
ML G +PD +Y++LI+ L + + D A + + + G D N+++
Sbjct: 529 SSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHG 588
Query: 475 LVQQGRFEEAHDIVKTSKERGIS 497
L G+ +EA I KE+ S
Sbjct: 589 LCSAGKVDEAFCIYLEMKEKNCS 611
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 119/493 (24%), Positives = 226/493 (45%), Gaps = 3/493 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P+ + YN ++ +L +D A F + PDR TY+ L+ G+ + +D AL
Sbjct: 154 IAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNAL 213
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE-IMKERNVCPNEATVRSLVHG 124
L+ +M G + Y L+ G + +V E ++++ PN AT + ++ G
Sbjct: 214 DLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDG 273
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A E+ R M + L++ L + AA + M G + +
Sbjct: 274 LCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLD 333
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S ++ + E D+ G++ + +TY ++ + L +G E L
Sbjct: 334 VSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLK 392
Query: 245 HVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ D S + ++ +I C+ +RA EI + R+ ++ +++++I+ CKD
Sbjct: 393 QLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKD 452
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
H E+ +++ G KP+ +N++I+ CR + DA+ EM G P ITY
Sbjct: 453 GRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITY 512
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI LC + L ++M PDI T+ +LI+ CR K++ A + + +L
Sbjct: 513 NTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILD 572
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL+ D ++ LI L +G+ DEA +L M++ C+P+ T N +++ + G ++
Sbjct: 573 AGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDK 632
Query: 484 AHDIVKTSKERGI 496
A + + G+
Sbjct: 633 AASLWTAILDNGL 645
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/482 (24%), Positives = 212/482 (43%), Gaps = 3/482 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P Y+ ++ L K + +D A +M + D YN L+ G R G+ ++A
Sbjct: 188 GVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKA 247
Query: 65 LRLVKQM-EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+++ +Q+ G +PN+ TY +++DG C R E V M N + T L+H
Sbjct: 248 MKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIH 307
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R D A + ++ + V N+L+ EA G G +
Sbjct: 308 GLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSG-IR 366
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRG-VKPRFSTYLLLMEALYKAGRDVEGDRY 242
+ +T++ L+ ++E +L P T+ L+ L + G
Sbjct: 367 QITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEI 426
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L +V SY+ +I+ FCK A E+ + M PN +N LI+G C+
Sbjct: 427 LEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCR 486
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++++ ++ + + G P T+N++ID LC+A ++++A EM+E G P+ T
Sbjct: 487 VSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRT 546
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y LIR LC V +LR++ ++ + D+ N LI C K+++A + M
Sbjct: 547 YASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMK 606
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
P+ +Y+ L+ + G D+A + ++ NG PD T N ++ L R
Sbjct: 607 EKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTP 666
Query: 483 EA 484
E
Sbjct: 667 EG 668
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 209/484 (43%), Gaps = 35/484 (7%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+NA+ID K + A ++M+ D YN L+ G G D AL +V++M+
Sbjct: 190 WNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMK 249
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G PNV TYT LI +C K + E F + E M V P+ T+ +LV G+ R
Sbjct: 250 ADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCR----- 304
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+ SEA A+ R+M G P T+ +
Sbjct: 305 ------------------------------DGQFSEAYALFREMDKIGVAPNHVTYCTLI 334
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L +E+ G+L + RGV Y LM+ L K G+ E L H D +
Sbjct: 335 DSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNIT 394
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
N +Y +++D C+ +D A ++ +M ++ + PN+VTF+++I+G K + K +
Sbjct: 395 PNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADY 454
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+ + + G P+ T+ ++ID + E ALD +M+ GV N + L+ L
Sbjct: 455 MRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRK 514
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G++ + LF+ M + D + L+ + + A K ++ L PD
Sbjct: 515 NGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVV 574
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y+ I L G+F EAK M G PD T N ++ ++G+ +A ++K K
Sbjct: 575 YNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMK 634
Query: 493 ERGI 496
I
Sbjct: 635 RNSI 638
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/520 (23%), Positives = 219/520 (42%), Gaps = 35/520 (6%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
+Y A++D L K I+ A + D P+ TY +L+ CR G +D A +++ QM
Sbjct: 364 MYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQM 423
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
E PNV T++ +I+G + + + MK+ + PN T +L+ G F+
Sbjct: 424 EEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQ 483
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
A ++ + V ++L+ L N A A+ + M +RG L + +
Sbjct: 484 EAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTL 543
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ L ++ + +++ + P Y + + L G+ E +L + L
Sbjct: 544 MDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGL 603
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+ +YN +I C+ +A ++ +EM+ I PNL+T+ TL+ G + V K +
Sbjct: 604 EPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKF 663
Query: 312 LLVMLLECGFKPDKFT-----------------------------------FNSMIDCLC 336
LL + GF P T +N+++ LC
Sbjct: 664 LLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLC 723
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
+A L EM+ G+ P+TIT+N LI C + + ++ +M +SP+I
Sbjct: 724 CHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIA 783
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
TFN L+ +I +A+ M +GL P+N +Y L+ K EA + + M
Sbjct: 784 TFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEM 843
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G P + T N ++ + G +A ++ K RG+
Sbjct: 844 VSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGV 883
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/501 (25%), Positives = 225/501 (44%), Gaps = 16/501 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y A+I K +D A+ ++ M PD T + L+ G+CR G EA
Sbjct: 252 GVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEA 311
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++M+ +G APN TY LID A+R +E +L M R V + +L+
Sbjct: 312 YALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDR 371
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY----RLSNNSMASEAAAILRKMGDRG 180
+ + +A ++L R + + +T V T+L R N A + +L +M ++
Sbjct: 372 LGKEGKIEEAKDVL-RHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQ---VLLQMEEKS 427
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P TF + LV L + + G+ P TY L++ +K +G
Sbjct: 428 VIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFK----FQGQ 483
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFC----KVNMMDRATEICREMRDRDIAPNLVTFNTL 296
V++D L V + N V+D K ++ A + ++M +R + + V + TL
Sbjct: 484 EAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTL 543
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ G K + ++ L+E PD +N I+CLC +F +A L EM G+
Sbjct: 544 MDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGL 603
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
P+ TYN +I + C G +++L+L ++M+ + I P++ T+ L+ ++KA+
Sbjct: 604 EPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKF 663
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
M + G P + ++ +++A S R D + M G + D N ++ L
Sbjct: 664 LLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLC 723
Query: 477 QQGRFEEAHDIVKTSKERGIS 497
G A ++ RGI+
Sbjct: 724 CHGMARNATVVLDEMLTRGIA 744
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/555 (23%), Positives = 234/555 (42%), Gaps = 70/555 (12%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P+ Y ++DA ++ +ID A QM P+ T++ +I+G+ + G + +A
Sbjct: 393 ITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAA 452
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFC---NAKRVAEVFR--------------------- 101
+++M+ G APNV TY LIDGF + +V+R
Sbjct: 453 DYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGL 512
Query: 102 -----------VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQK 150
+ + M ER + + +L+ G+F+ + AF++ ME+
Sbjct: 513 RKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDA 572
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
+V N + L SEA + L++M + G P+ +T++ + ++ +L
Sbjct: 573 VVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKE 632
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV------------------------ 246
+ +KP TY L+ L +AG + LN +
Sbjct: 633 MKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRR 692
Query: 247 -----------FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
L +++ YN ++ C M AT + EM R IAP+ +TFN
Sbjct: 693 PDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNA 752
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
LI GHCK + + + +L G P+ TFN+++ L A R +A LS+M + G
Sbjct: 753 LILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVG 812
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ PN +TY+IL+ + +LRL+ +M + P T+N+L+ F + + +A+
Sbjct: 813 LEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAK 872
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ F M G+ + +Y L+ K E + M++ G P T + +
Sbjct: 873 ELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAF 932
Query: 476 VQQGRFEEAHDIVKT 490
+ G EA ++KT
Sbjct: 933 SRPGMTGEARRLLKT 947
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 122/495 (24%), Positives = 205/495 (41%), Gaps = 39/495 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++ T YN + AL + LA +M D T + + G+CR G+V EA
Sbjct: 111 VAADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAA 170
Query: 66 RLVKQM-EGLGY-APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L + + G G +V + LIDG+C + +A V+E M + V + SLV
Sbjct: 171 ALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVA 230
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYL 182
G F D A E++ R M+ + + +V T L+ EA ++ M G L
Sbjct: 231 GFFHSGDADAALEVVER-MKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVL 289
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ T V L +E + K GV P TY L+++L KA R E
Sbjct: 290 PDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGL 349
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + +V ++ Y ++D K ++ A ++ R + +I PN VT+
Sbjct: 350 LGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTV------- 402
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++D CRA + A L +M E V PN +T
Sbjct: 403 ----------------------------LVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVT 434
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
++ +I L G + ++ +KM+ I+P++ T+ LI F + E A + ML
Sbjct: 435 FSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDML 494
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G+ +NF +L+ L K+G + A+ F M++ G D +++ L + G
Sbjct: 495 HEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMP 554
Query: 483 EAHDIVKTSKERGIS 497
A + + E+ +S
Sbjct: 555 AAFKVGQELMEKNLS 569
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 141/303 (46%), Gaps = 2/303 (0%)
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
D+ +++ +GV Y L+ + +G + + D + NV +Y
Sbjct: 202 DMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYT 261
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
+I +CK MD A + M + P++VT + L+ G C+D + + L + +
Sbjct: 262 ALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKI 321
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G P+ T+ ++ID L +A R ++L L EMV GV + + Y L+ L G + +
Sbjct: 322 GVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEA 381
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+ + Q+D I+P+ T+ L+ + CR I+ AE+ M + P+ ++S++I
Sbjct: 382 KDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIING 441
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ-QGRFEEAHDIVKTSKERGISF 498
L+K G +A M+ +G P+ T +++ + QG+ E A D+ + G+
Sbjct: 442 LVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQ-EAALDVYRDMLHEGVEA 500
Query: 499 KSF 501
+F
Sbjct: 501 NNF 503
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 136/370 (36%), Gaps = 74/370 (20%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN +I A + A ++M + KP+ TY L+ G+ GVV +A
Sbjct: 602 GLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKA 661
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK----------------- 107
L+ +M G+AP T+ ++ ++R + + E+M
Sbjct: 662 KFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHV 721
Query: 108 ------------------ERNVCPNEATVRSLVHGVFRCLDPH--KAFELLIRFMEREPL 147
R + P+ T +L+ G C H AF + + + +
Sbjct: 722 LCCHGMARNATVVLDEMLTRGIAPDTITFNALILG--HCKSSHLDNAFAIYAQMLHQGLS 779
Query: 148 TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGI 207
NTLL L + EA +L M G P + T+D VT + E +
Sbjct: 780 PNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRL 839
Query: 208 LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
+ +G P+ STY N ++ F K
Sbjct: 840 YCEMVSKGFIPKASTY-----------------------------------NSLMSDFAK 864
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
MM++A E+ EM+ R + T++ L++G K + R LL + E GFKP K T
Sbjct: 865 AGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGT 924
Query: 328 FNSMIDCLCR 337
+SM R
Sbjct: 925 ISSMSRAFSR 934
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 221/482 (45%), Gaps = 38/482 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+T +N+++D L K++++DLA F +M++ C PD TYN +I+G+ R G +D A
Sbjct: 615 GCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYA 674
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV-LEIMKERNVCPNEATVRSLVH 123
QM+ +P+ T LI G RV + +V +E + + + N L+
Sbjct: 675 FWFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELM- 732
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
C+ E I F E LVCN++ D LP
Sbjct: 733 ---ECILTEAEIEEAISFAE------ILVCNSVC------------------QDDHVMLP 765
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKR-GVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+ L + + D F K G+ P +Y LM+ L + +
Sbjct: 766 -------LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALEL 818
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ N +YN+++D K +++ ++ EMR R PN +T N +IS K
Sbjct: 819 FEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVK 878
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++K +L L+ F P T+ +ID L +A R E A+ EM+++G PN++
Sbjct: 879 SNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVI 938
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YNILI G++ + LF+KM + I PD+ ++ L++ C +I++A + F +
Sbjct: 939 YNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELK 998
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
GL PD SY+ +I L KS R DEA F M+ G +PD YT N ++ L G+ +
Sbjct: 999 LTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVD 1058
Query: 483 EA 484
A
Sbjct: 1059 VA 1060
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 218/482 (45%), Gaps = 2/482 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ Y I AL ++ ID A+ F++M + C PD TY +LI +C G +D+
Sbjct: 264 IGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDK 323
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L +M ++P+ TY L+D F + V R M+ P+ T L+
Sbjct: 324 AKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIE 383
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + D +AF++L + NT++ L EA +L M G P
Sbjct: 384 ALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKP 443
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + D + +T KRG+ P + + L + GR E +
Sbjct: 444 TAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIF 503
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + K L + +YNM++ C+ K +D+AT++ EM + P+++ N+LI+ K
Sbjct: 504 NDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKA 563
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V ++ L P T+N ++ L + + AL+ M E G PPNTIT+
Sbjct: 564 GRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITF 623
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L+ L V +L++F +M +PD+ T+N +I R +I+ A FF +
Sbjct: 624 NSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAF-WFFHQMK 682
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC-NPDSYTSNLILETLVQQGRFE 482
L PD + LI +++ GR ++A + + C +S ++E ++ + E
Sbjct: 683 KFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIE 742
Query: 483 EA 484
EA
Sbjct: 743 EA 744
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 231/488 (47%), Gaps = 9/488 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS + Y+A++ AL + ++M +P+ +TY I I + R +D+A
Sbjct: 230 GMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDA 289
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ K+M+ G P+V TYT+LID C A ++ + + M+ + P+ T +L+
Sbjct: 290 WGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDK 349
Query: 125 VFRCLDPHKAFELLIRF---MEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRG 180
+ D E + RF ME + +V T+L L + A +L M +G
Sbjct: 350 FGKVGD----LETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKG 405
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P T++ + L+ L+E +L+ GVKP +Y+L ++ K+G +
Sbjct: 406 IFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAI 465
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ K ++ ++ + N + + + A +I ++ ++P+ VT+N L+ +
Sbjct: 466 DTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCY 525
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K ++ K +LL ++ G +PD NS+I+ L +A R + A + + P
Sbjct: 526 SKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTV 585
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TYNIL+ L G + ++L LF M P+ TFN+L+ + + ++ A K F
Sbjct: 586 VTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCR 645
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M + PD +Y+ +I LI+ GR D A F M++ +PD T ++ +V+ GR
Sbjct: 646 MTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGR 704
Query: 481 FEEAHDIV 488
E+A +V
Sbjct: 705 VEDAIKVV 712
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/533 (24%), Positives = 233/533 (43%), Gaps = 44/533 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP + YN ++ K+ ID A +M C+PD N LI+ + + G VD A
Sbjct: 510 GLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAA 569
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +++ L AP V TY IL+ G ++ + + M E PN T SL+
Sbjct: 570 WKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLD- 628
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQ----KLVCNTLLYRL-------------------- 160
CL + A +L ++ R + L NT++Y L
Sbjct: 629 ---CLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKFL 685
Query: 161 --------------SNNSMASEAAAILRKMGDRGYLPESSTF-DYTVTCLVTGLDLNETC 205
+ +A ++ + + L +S F + C++T ++ E
Sbjct: 686 SPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAI 745
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS-NVNSYNMVIDC 264
+ + V L L++ L K + ++ + K+ + + SYN ++D
Sbjct: 746 SFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDG 805
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
N ++A E+ +M+ PN T+N L+ H K ++K +L + G +P+
Sbjct: 806 LLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPN 865
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
T N +I L +++ ALD E++ P TY LI L G +++++F+
Sbjct: 866 AITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFE 925
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+M P+ +N LI F + +I+ A + F M+ G+RPD SY+ L++ L +G
Sbjct: 926 EMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITG 985
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
R DEA Q F ++ G +PD+ + N I+ L + R +EA + K RGIS
Sbjct: 986 RIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGIS 1038
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 163/343 (47%), Gaps = 1/343 (0%)
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
T+ LS A LRKM + G++ + +++ + L+ G NE + I
Sbjct: 171 TIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLPGF-CNEALKVYKRMISE 229
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G+KP TY LM AL + G + L + L N+ +Y + I + +D A
Sbjct: 230 GMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDA 289
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
I +EM D P+++T+ LI C ++ K +EL V + PD+ T+ +++D
Sbjct: 290 WGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDK 349
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
+ E +EM G P+ +TY ILI +LC GDV R+ + M I P+
Sbjct: 350 FGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPN 409
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
++T+N +I + ++++A + +M +LG++P FSY I KSG +A TF
Sbjct: 410 LHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFE 469
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+M++ G P N L TL + GR EA DI + G+S
Sbjct: 470 TMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLS 512
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 206/454 (45%), Gaps = 11/454 (2%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYT----ILIDGFCNAKRVAEVFRV 102
TY + + G + A +++M +G+ N Y+Y +L+ GFCN E +V
Sbjct: 168 TYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLPGFCN-----EALKV 222
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LS 161
+ M + P+ T +L+ + R D K LL M+ L + T+ R L
Sbjct: 223 YKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEE-MKSIGLRPNIYTYTICIRALG 281
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
+A I ++M D G P+ T+ + L L++ + P
Sbjct: 282 RARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRV 341
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
TY+ LM+ K G R+ N + D +V +Y ++I+ CK +DRA ++ M
Sbjct: 342 TYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVM 401
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+ I PNL T+NT+I G K + + ELL + G KP F++ ID ++
Sbjct: 402 TTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDP 461
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
A+D M + G+ P+ N + +L G ++ + +F + +SPD T+N L
Sbjct: 462 AKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNML 521
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
++ + + +I+KA + M++ G PD ++LI L K+GR D A + F ++
Sbjct: 522 MKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKL 581
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
P T N++L L ++G+ +A ++ + E G
Sbjct: 582 APTVVTYNILLTGLGKEGKILKALELFGSMTESG 615
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/483 (22%), Positives = 207/483 (42%), Gaps = 42/483 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ + +P YN +I L++ ID A+ F QM PD T LI G+ R G
Sbjct: 646 MTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGR 704
Query: 61 VDEALRLVKQMEGLGYA---PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
V++A+++V ME + A N + L++ + E EI+ +VC ++
Sbjct: 705 VEDAIKVV--MEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHV 762
Query: 118 VRSLVHGVFR---CLDPHKAFELLIRFMEREPLTQKLVC--------------------- 153
+ L+ + + LD F+ + + P + C
Sbjct: 763 MLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDM 822
Query: 154 ------------NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
N LL + ++ + +M RG P + T + ++ LV +L
Sbjct: 823 KSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNL 882
Query: 202 NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
N+ + + P TY L++ L KAGR + + + N YN++
Sbjct: 883 NKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNIL 942
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
I+ F K +D A E+ ++M I P+L ++ L+ C + + + L G
Sbjct: 943 INGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGL 1002
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
PD ++N +I+ L ++ R ++AL SEM G+ P+ TYN LI L G V +++
Sbjct: 1003 DPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVK 1062
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
+++++Q + P ++T+NALI+ ++A F M+ +G P+ +++ L
Sbjct: 1063 MYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYP 1122
Query: 442 KSG 444
++G
Sbjct: 1123 RAG 1125
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 146/299 (48%), Gaps = 9/299 (3%)
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN----MVI 262
+ D K+ + +TY+ + +AL G L + + + N SYN +++
Sbjct: 153 VFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLL 212
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
FC + A ++ + M + P++ T++ L+ + + K LL + G +
Sbjct: 213 PGFC-----NEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLR 267
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P+ +T+ I L RA R +DA EM + G P+ ITY +LI +LCA G + ++ L
Sbjct: 268 PNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKEL 327
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
+ KM+A SPD T+ L+ F ++ +E ++ + M G PD +Y+ LI+AL K
Sbjct: 328 YVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCK 387
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
SG D A M G P+ +T N ++ L++ R +EA ++++ + G+ +F
Sbjct: 388 SGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAF 446
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 160/377 (42%), Gaps = 35/377 (9%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P +YN L+ G+ ++AL L + M+ G PN +TY +L+D +KR+ +++ +
Sbjct: 794 PTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDL 853
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
M+ R PN T ++ + + + +KA +L M + L+ L
Sbjct: 854 YSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLK 913
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+ +A I +M D G P S ++ + +++ C + +K G++P
Sbjct: 914 AGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRP---- 969
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
++ SY ++++C C +D A + E++
Sbjct: 970 -------------------------------DLKSYTILVECLCITGRIDEAVQYFEELK 998
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+ P+ V++N +I+G K + + L + G PD +T+N++I L A + +
Sbjct: 999 LTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVD 1058
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
A+ E+ G+ P+ TYN LIR G+ ++ +F+KM SP+ TF L
Sbjct: 1059 VAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLP 1118
Query: 403 QSFCRMNKIEKAEKAFF 419
+ R + A F
Sbjct: 1119 NKYPRAGLVHNPFGAVF 1135
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP YNA+I L + +D+A ++++ + +P FTYN LI G G D+A
Sbjct: 1036 GISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQA 1095
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEI 105
+ K+M +G +PN T+ L + + A V F + I
Sbjct: 1096 FSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHNPFGAVFI 1136
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 214/463 (46%), Gaps = 1/463 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + YN++I+ K ++ A F +M KP +Y LI G C G + EA
Sbjct: 431 GIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEA 490
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL +M G G APN YT+T LI A R+ + FR+ + M E+N+ PNE T ++ G
Sbjct: 491 FRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEG 550
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + KAFELL + +++ + L+ L + EA + + +
Sbjct: 551 HCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLN 610
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + L + G+ +KRGV Y +L++ K L
Sbjct: 611 EMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLK 670
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
++ RL + Y +ID + K + +A I M D PN+VT+ TLI+ CK
Sbjct: 671 NMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAG 730
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ K L +L P+ T+ +D L R E A+ ++M++ G+ NT++YN
Sbjct: 731 LMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYN 789
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
IL+R C +G V + +L +M + I PD T++ +I CR ++ A + + +ML
Sbjct: 790 ILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNK 849
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
GL+PD +Y+ LI +G +A + M + G P+ T
Sbjct: 850 GLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQAT 892
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 226/493 (45%), Gaps = 1/493 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G PS +YNA+I++L K D A L F++M + TY+ILI CR G +D
Sbjct: 360 VGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDT 419
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ + +M G VY Y LI+G C ++ + M ++ + P + SL+
Sbjct: 420 AIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLIS 479
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G H+AF L + TL+ L + ++A + +M ++ +P
Sbjct: 480 GYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMP 539
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + + + +L+ +++G+ P TY L+ +L GR E +++
Sbjct: 540 NEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFI 599
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + ++ N Y+ ++ +CK + A +CREM R + +LV + LI G K+
Sbjct: 600 DDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKE 659
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ LL + + +PDK + SMID +A + A M++ G PN +TY
Sbjct: 660 QDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTY 719
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI LC G + ++ L+++M +P+ T+ + R +EKA + ML
Sbjct: 720 TTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK 779
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL + SY+ L++ K GR +EA + M N PD T + I+ ++G +
Sbjct: 780 -GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDG 838
Query: 484 AHDIVKTSKERGI 496
A + T +G+
Sbjct: 839 AIEFWDTMLNKGL 851
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 217/490 (44%), Gaps = 44/490 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI P +Y AVI + + + A Q+M + + YN+LIHG+C+ V E
Sbjct: 222 MGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRM--ESSDLNVVVYNVLIHGLCKNKRVWE 279
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ + + G + TY L+ G C + V++ M E P EA + SLV
Sbjct: 280 AVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVE 339
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R AF+L+ R + + V N L+ L + EA + ++MG++G
Sbjct: 340 GLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCA 399
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ ++D+F +RG + T + + + AG +
Sbjct: 400 NDVTYSI----------------LIDSFCRRG---KLDTAIHFLGKMIMAGIKI------ 434
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
V YN +I+ CK+ + A EM D+ + P +V++ +LISG+C
Sbjct: 435 ----------TVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNK 484
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++H+ L + G P+ +TF ++I L RA+R DA EM+E + PN +TY
Sbjct: 485 GKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTY 544
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N++I C G+ ++ L +M + PD YT+ LI S C ++ +A+K +
Sbjct: 545 NVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHR 604
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ----- 478
+ + YSAL+ K GR +A M + G + D ++++ +++
Sbjct: 605 EHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSA 664
Query: 479 --GRFEEAHD 486
G + HD
Sbjct: 665 VFGLLKNMHD 674
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 221/484 (45%), Gaps = 2/484 (0%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
++ +I + V+ + + L F+ M + P T +++G+ +I VD L L ++
Sbjct: 161 FDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEIL 220
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
+G P++Y Y +I FC K A+ +++ M+ ++ N L+HG+ +
Sbjct: 221 SMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVW 278
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A E+ +++ ++ TL+ L A ++ +M + G++P + V
Sbjct: 279 EAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLV 338
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L + + +++ K G P Y L+ +L K G+ E + + + L
Sbjct: 339 EGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLC 398
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+N +Y+++ID FC+ +D A +M I + +N+LI+GHCK +
Sbjct: 399 ANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSF 458
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+++ G KP ++ S+I C + +A EM G+ PNT T+ LI +L
Sbjct: 459 FDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFR 518
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
+ + RLF +M + P+ T+N +I+ C+ KA + M+ GL PD ++
Sbjct: 519 ANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYT 578
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y LI +L +GR EAK+ + + + + +L ++GR +A + +
Sbjct: 579 YRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMV 638
Query: 493 ERGI 496
+RG+
Sbjct: 639 KRGV 642
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/480 (22%), Positives = 213/480 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++ S Y ++ L K ++ +M P + L+ G+ R G V +A
Sbjct: 291 GLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDA 350
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LV +++ +G P+++ Y LI+ C + E + + M E+ +C N+ T L+
Sbjct: 351 FDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDS 410
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R A L + + N+L+ S A + +M D+G P
Sbjct: 411 FCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPT 470
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ ++ L+E + +G+ P T+ L+ AL++A R + R +
Sbjct: 471 VVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFD 530
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++ N +YN++I+ CK +A E+ +M + + P+ T+ LIS C
Sbjct: 531 EMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTG 590
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V + ++ + L FK ++ +++++ C+ R DAL EMV+ GV + + Y
Sbjct: 591 RVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYA 650
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI D + L + M R+ PD + ++I + + ++KA + M+
Sbjct: 651 VLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDE 710
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G P+ +Y+ LI L K+G D+A+ + M + P+ T L+ L ++G E+A
Sbjct: 711 GCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKA 770
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 196/431 (45%), Gaps = 21/431 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P+T + +I AL ++N + A+ F +M P+ TYN++I G C+ G +A
Sbjct: 501 GIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKA 560
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ QM G P+ YTY LI C+ RV E + ++ + + NE +L+HG
Sbjct: 561 FELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHG 620
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA-AILRKMGDRGYLP 183
+ A + R M + + LVC +L + + A +L+ M D+ P
Sbjct: 621 YCKEGRLRDALGV-CREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRP 679
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ + + + + GI D I G P TY L+ L KAG + +
Sbjct: 680 DKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAEL-- 737
Query: 244 NHVFKDRLVSNVNSYNMVIDCF----CKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
++K+ LVSN ++ CF + M++A ++ +M + + N V++N L+ G
Sbjct: 738 --LWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRG 794
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK V + +LL +++ PD T++++I CR + A++ M+ G+ P+
Sbjct: 795 FCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPD 854
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
T+ YN LI C G++ ++ L M + P+ T +L R F
Sbjct: 855 TLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASRK----------F 904
Query: 420 SMLTLGLRPDN 430
S+ T + P+N
Sbjct: 905 SISTHPVMPEN 915
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 159/373 (42%), Gaps = 2/373 (0%)
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
LDP + FE L+ E+ L + L+ ++ I R M +P+ T
Sbjct: 137 LDPREVFEALLDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTL 196
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ L ++ + + G++P Y+ ++ + + + + +
Sbjct: 197 GEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMES 256
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
L NV YN++I CK + A EI + + + + VT+ TL+ G CK E
Sbjct: 257 SDL--NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEV 314
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
++ ++E GF P + +S+++ L R + DA D ++ + + G P+ YN LI
Sbjct: 315 GAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALIN 374
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
SLC G + LF++M + + T++ LI SFCR K++ A M+ G++
Sbjct: 375 SLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKI 434
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+ Y++LI K G A F M G P + ++ +G+ EA +
Sbjct: 435 TVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLY 494
Query: 489 KTSKERGISFKSF 501
+GI+ ++
Sbjct: 495 HEMTGKGIAPNTY 507
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 155/367 (42%), Gaps = 59/367 (16%)
Query: 156 LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRG 215
L++ L N ++ A+++L+ + RG L F+ + C D + G D I+
Sbjct: 111 LIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALLDCF-EKCDFISSLG-FDLLIQSY 168
Query: 216 VKPR--FSTYLL--------LMEALYKAGRDVEGDRYLNHV------FKDRLVSNVNS-- 257
V+ + F + L+ LM + G + G + V F + L +
Sbjct: 169 VQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDI 228
Query: 258 --YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
Y VI FC++ +A E+ + M D+ N+V +N LI G CK+ V + E+
Sbjct: 229 YIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVWEAVEIKNG 286
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
L++ G + T+ +++ LC+ FE + EM+E G P + L+ L G
Sbjct: 287 LIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGK 346
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
V + +F +N+++K +G P F Y+A
Sbjct: 347 V-------------------------VDAFDLVNRVKK----------VGAMPSLFVYNA 371
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
LI +L K G+FDEA+ F M + G + T ++++++ ++G+ + A + G
Sbjct: 372 LINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAG 431
Query: 496 ISFKSFP 502
I +P
Sbjct: 432 IKITVYP 438
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 213/450 (47%), Gaps = 5/450 (1%)
Query: 49 NILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
N L+ R EA L K +P+ TY+ LI+GFC A+ + +R+L+ M++
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF--MEREPLTQKLVCNTLLYRLSNNSMA 166
R + P+ A +++ G+ D + L+ + M+R + L+ L ++
Sbjct: 62 RGIVPHNAVYNTIIKGL---CDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARI 118
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
S+A+ IL M + G P T++ + +++E + + ++ P TY +L
Sbjct: 119 SDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNIL 178
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ K R +G + L + K N +YN ++D K A + + M RD
Sbjct: 179 IDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC 238
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P+ TFN +I CK ++ EL ++ + G PD +T+N MI CRA+R +DA
Sbjct: 239 KPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQ 298
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L M E G PP+ +TYN ++ LC V + +++ ++ D+ T + LI C
Sbjct: 299 LLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLC 358
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ +++ AEK M G PD +Y+ LI K+ + D++ F M GC P
Sbjct: 359 KSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVI 418
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGI 496
T +++++ L + R + ++KT ERG+
Sbjct: 419 TYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 211/454 (46%), Gaps = 36/454 (7%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP + Y+ +I+ K+ AY +M P YN +I G+C G VD AL
Sbjct: 30 SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 89
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+ M+ AP+V TYTIL+D C + R+++ +LE M E PN T +L++G
Sbjct: 90 HYRDMQR-HCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 148
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + +A L + +E N L+ + A +L++M
Sbjct: 149 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEM---------- 198
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+K G +P F TY LM++L K+G+ ++ +
Sbjct: 199 -------------------------VKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMM 233
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ + ++N++ID FCKV +D A E+ + M DR P++ T+N +ISG C+ +
Sbjct: 234 LRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRI 293
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
R+LL + E G PD T+NS++ LC+A + ++A + + G + +T + L
Sbjct: 294 DDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTL 353
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I LC + + +L ++M+ + +PD+ + LI FC+ ++++K+ F ML G
Sbjct: 354 IDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGC 413
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
P +YS +I L KS R + +M + G
Sbjct: 414 VPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 191/423 (45%), Gaps = 38/423 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +YN +I L + +D A + ++ M C P TY IL+ +C+ + +A
Sbjct: 63 GIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCKSARISDA 121
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ M G APNV TY LI+GFC + E + M E + P+ T L+ G
Sbjct: 122 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 181
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ P + A +L++M G P
Sbjct: 182 YCKQERPQ-----------------------------------DGAKLLQEMVKYGCEPN 206
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + LV + + ++R KP T+ L+++ K G+ ++ L
Sbjct: 207 FITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQ-LDLAYELF 265
Query: 245 HVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ DR + ++ +YN++I C+ N +D A ++ M + P++VT+N+++SG CK
Sbjct: 266 QLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKA 325
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++V + E+ +L G+ D T +++ID LC++ R +DA L EM G P+ + Y
Sbjct: 326 SQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAY 385
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
ILI C + +SL F +M P + T++ +I C+ ++ +ML
Sbjct: 386 TILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLE 445
Query: 424 LGL 426
G+
Sbjct: 446 RGV 448
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 223/496 (44%), Gaps = 39/496 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++I VK +D A+ F +M P N +I +C++ +D+A
Sbjct: 206 GLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKA 264
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+V++M G AP+++TY+++IDG C +K + + RVLE M E PN T SL+HG
Sbjct: 265 ESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHG 324
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
Y +S M +E+ + ++M G +P
Sbjct: 325 ---------------------------------YSIS--GMWNESVRVFKQMSSCGVIPT 349
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY-- 242
+ + L NE I D+ + +G KP +Y ++ A D +
Sbjct: 350 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 409
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
N + + N + +N++I+ + + MMD+A I +M+++ + P+ VTF T+IS C+
Sbjct: 410 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 469
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ +++ G P + + +I C A + +SEM+ +PP +
Sbjct: 470 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 529
Query: 363 Y-NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y + +I +LC G VA + M P++ TFN+L++ +C + +E+A +M
Sbjct: 530 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAM 589
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
++G+ P+ + Y L+ K+GR D+A F M G P S ++IL L Q R
Sbjct: 590 ASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRT 649
Query: 482 EEAHDIVKTSKERGIS 497
A + E G +
Sbjct: 650 TAAKKMFHEMIESGTT 665
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/537 (24%), Positives = 238/537 (44%), Gaps = 44/537 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P Y+ +ID L KS ++D A +QM +P+ TYN LIHG G+ +E+
Sbjct: 275 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 334
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+R+ KQM G P V I R E + + M + P+ + +++HG
Sbjct: 335 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 394
Query: 125 VF----RCL-DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
CL D H F L+ + + K V N L+ + M +A I M ++
Sbjct: 395 YATATDSCLADVHNIFNLM---LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 451
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEA---------- 229
G +P++ TF ++ L L++ + + GV P + Y L++
Sbjct: 452 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 511
Query: 230 --------------------------LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
L K GR EG ++ + + NV ++N +++
Sbjct: 512 KELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLME 571
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
+C V M+ A + M I PN + TL+ G+CK+ + + +L G KP
Sbjct: 572 GYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 631
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
++ ++ L +A R A EM+E G + TY +++ LC + L
Sbjct: 632 TSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLL 691
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+K+ A + DI TFN +I + ++ + ++A++ F ++ T GL P+ +YS +I LIK
Sbjct: 692 EKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKE 751
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
++EA F+S+E++G DS N I+ L+ + +A + + E ++ ++
Sbjct: 752 ESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEA 808
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 141/308 (45%), Gaps = 38/308 (12%)
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
R P TY +L++ + R G + + K+ L + SY+++ F K +D+
Sbjct: 170 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG-FVKDGEVDK 228
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + EM ++ + P ++ N++I CK E+ K ++ +++ G PD FT++ +ID
Sbjct: 229 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 288
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
LC++ + A L +MVE G PN+ITYN LI G S+R+F++M + + P
Sbjct: 289 GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIP 348
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA------------------ 435
+ N+ I + + + +A+ F SM+ G +PD SYS
Sbjct: 349 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN 408
Query: 436 -------------------LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
LI A + G D+A F M+ G PD+ T ++ +L
Sbjct: 409 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 468
Query: 477 QQGRFEEA 484
+ GR ++A
Sbjct: 469 RIGRLDDA 476
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 128/341 (37%), Gaps = 35/341 (10%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P + ++++I+ L K + M +P+ T+N L+ G C +G ++EA L
Sbjct: 526 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 585
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ M +G PN Y Y L+DG+C R+ + V M + V P ++HG+F+
Sbjct: 586 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 645
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
A ++ +E +L L N+ EA +L K+
Sbjct: 646 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL----------- 694
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
VK T+ +++ A++K GR E + +
Sbjct: 695 ------------------------FAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAIS 730
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
LV N+ +Y+M+I K + A + + A + N ++ AEV
Sbjct: 731 TYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVA 790
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
K L ++ E + T + + R ++ + + L
Sbjct: 791 KASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 831
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/448 (27%), Positives = 205/448 (45%), Gaps = 1/448 (0%)
Query: 51 LIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
++ IG EA+ +V +ME G V T + V V + M+ R
Sbjct: 167 MVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRG 226
Query: 111 VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA 170
VCP+ + + + R L + R + C ++ AS
Sbjct: 227 VCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVF 286
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
K + G P F + L + + +L+ +K+G KP T+ L++ L
Sbjct: 287 WYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGL 346
Query: 231 YKAGRDVEGDR-YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
K G + R +L V D NV++Y +I +CK + ++RA + M+++ + PN
Sbjct: 347 CKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPN 406
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
T+ LI GH K K EL+ ++ + GF + FT+N+ ID LC+ RF +A L
Sbjct: 407 TKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLK 466
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
+ G+ +T+TY ILI LC D +L F KM + PD++T+N LI +F R
Sbjct: 467 KGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQR 526
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
++E++EK F + LGL P +Y+++I + A + F M +GC PDS T
Sbjct: 527 RMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYG 586
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGIS 497
++ L ++ + +EA + + ++G+S
Sbjct: 587 ALISGLCKESKLDEACQLYEAMVDKGLS 614
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 192/411 (46%), Gaps = 14/411 (3%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
KP+ + LI+G+C+ G + +A ++++M G+ PNVYT+T LIDG C + FR
Sbjct: 298 KPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFR 357
Query: 102 V-LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR- 159
+ L++++ + PN T S++HG + ++A LL R E Q LV NT Y
Sbjct: 358 LFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKE-----QGLVPNTKTYTC 412
Query: 160 -LSNNSMAS---EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRG 215
+ +S A +A ++ MG G+ T++ + L E C +L + G
Sbjct: 413 LIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLG 472
Query: 216 VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT 275
++ TY +L+ L + E + + +FK + ++++YN +I F + M+ +
Sbjct: 473 LQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESE 532
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
++ E + P T+ ++I G+C+D V + + + G PD T+ ++I L
Sbjct: 533 KLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGL 592
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
C+ + ++A MV+ G+ P +T L C D A ++ + +++ I
Sbjct: 593 CKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERLDKKLW---I 649
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
T N LI+ C K+ A F +L D + +A A +S ++
Sbjct: 650 RTVNTLIRKLCSERKVGMAVLFFHKLLDKDQNVDRVTLTAFTTACYESNKY 700
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 192/428 (44%), Gaps = 7/428 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ + R N V + + A F +M V PD +Y ++ CR+G + +
Sbjct: 191 GLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDT 250
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R +K M G+ + T T++I FC + VF + E + PN SL++G
Sbjct: 251 DRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLING 310
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDRGYLP 183
+ + +AFE+L +++ L+ L +A + K+ Y P
Sbjct: 311 LCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKP 370
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ + LN +L ++G+ P TY L++ KAG + +
Sbjct: 371 NVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELM 430
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K+ +N+ +YN ID CK A ++ ++ + + VT+ LIS C+
Sbjct: 431 DLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRR 490
Query: 304 AEVHKTRELLVM---LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
A+ TRE LV + + G +PD T+N++I R R E++ +E V G+ P
Sbjct: 491 AD---TREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTK 547
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
TY +I C +V+ +L+ F +M +PD T+ ALI C+ +K+++A + + +
Sbjct: 548 ETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEA 607
Query: 421 MLTLGLRP 428
M+ GL P
Sbjct: 608 MVDKGLSP 615
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 117/295 (39%), Gaps = 3/295 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+T+ Y +ID K+ + + AY M + + FTYN I +C+ G EA
Sbjct: 402 GLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEA 461
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L+K+ LG + TYTILI C E M + V P+ T +L+
Sbjct: 462 CKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAA 521
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R ++ +L + + K +++ + S A +M D G P+
Sbjct: 522 FSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPD 581
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S T+ ++ L L+E C + + + +G+ P T L L K L
Sbjct: 582 SLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILE 641
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ K + VN+ +I C + A ++ D+D + VT +
Sbjct: 642 RLDKKLWIRTVNT---LIRKLCSERKVGMAVLFFHKLLDKDQNVDRVTLTAFTTA 693
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ T Y +I L + A + F +M +PD TYN LI R ++E
Sbjct: 471 LGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEE 530
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ +L + GLG P TYT +I G+C + V+ + M + P+ T +L+
Sbjct: 531 SEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALIS 590
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +A +L +++ ++ TL Y ++ A IL ++ + ++
Sbjct: 591 GLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERLDKKLWIR 650
Query: 184 ESSTF 188
+T
Sbjct: 651 TVNTL 655
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 207/476 (43%), Gaps = 35/476 (7%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP+ + +ID LV S + A L ++++ C+ DRF YN+LI R G +D A+
Sbjct: 62 SPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAME 121
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+ ++M+ G P+ YTY L++ A RV E + M ER + PN T +L+ F
Sbjct: 122 MFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTY-NLLMDAF 180
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
R K +L + A + +M RG+ P
Sbjct: 181 R-----KVGQLDM-----------------------------ALGLFAEMKRRGFQPSVV 206
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + L + + + G P TY L+ L K+GR E + +
Sbjct: 207 TYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREM 266
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ ++ +YN ++ K MDR ++ +EM + P+ +FNT++ K +
Sbjct: 267 VDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKP 326
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
RE+ ++E G KPD ++N +ID R A L EMVE G P T TYN L
Sbjct: 327 DAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSL 386
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I L G V + + ++M+ PD+ T+N L+ + + ++A + F M G+
Sbjct: 387 IHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGV 446
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
PD SY+ I L R DEA F M+ GC D +++ + G E
Sbjct: 447 EPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTE 502
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 205/449 (45%), Gaps = 8/449 (1%)
Query: 51 LIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
LI R +A L Q E +P V+ +T LID N+ V + + ++
Sbjct: 36 LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95
Query: 111 VCPNEATVRSLVHGVFRCLDPHKAFELL----IRFMEREPLTQKLVCNTLLYRLSNNSMA 166
+ L+ R A E+ I+ E + T + N L
Sbjct: 96 CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNAL----GKAGRV 151
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
EA + M +RG P T++ + L+ G+ +RG +P TY +L
Sbjct: 152 QEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNIL 211
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++AL AGR + + + D + +Y+ +++ K ++ A ++ REM DR +
Sbjct: 212 LDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGV 271
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
A +LV +N+L++ K + + +L+ + GF PD F+FN+++D L +A++ + A +
Sbjct: 272 AVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAARE 331
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
+ MVE G P+ I+YNILI S GD A++ ++ ++M P+ T+N+LI
Sbjct: 332 VFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLA 391
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
++++A M T G RPD +Y+ L+ L K G A + F M+ G PD+
Sbjct: 392 TDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTL 451
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ + ++ L R +EA + K K G
Sbjct: 452 SYAVRIDGLAFDDRLDEALVLFKDMKAVG 480
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 171/383 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y +++AL K+ + A F M P+ TYN+L+ ++G +D A
Sbjct: 130 GSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMA 189
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M+ G+ P+V TY IL+D C+A RV ++ M P+ T +LV+G
Sbjct: 190 LGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNG 249
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A ++ ++R + N+LL L+ ++++M +G+ P+
Sbjct: 250 LGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPD 309
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ +F+ + L + + ++ G KP +Y +L+++ + G + + L
Sbjct: 310 AFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLE 369
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + +YN +I +D A + EM P++VT+N L+ K
Sbjct: 370 EMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRG 429
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E + L + + G +PD ++ ID L R ++AL +M G P + Y
Sbjct: 430 ENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYR 489
Query: 365 ILIRSLCAIGDVARSLRLFQKMQ 387
ILIR+ GD +L + Q
Sbjct: 490 ILIRAAHRAGDTELEAQLKHESQ 512
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 140/303 (46%), Gaps = 2/303 (0%)
Query: 199 LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY 258
LD ET +L + G R +T + L+ A + + + N V+++
Sbjct: 11 LDPLET--LLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAF 68
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
+ID +RA + +++ + + +N LI + ++ E+ +
Sbjct: 69 TKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKI 128
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
G +PD++T+ +++ L +A R ++A M+E G+ PN TYN+L+ + +G +
Sbjct: 129 KGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDM 188
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+L LF +M+ P + T+N L+ + C ++ A K F M G PD+++YS L+
Sbjct: 189 ALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVN 248
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
L KSGR +EA + F M G D N +L TL + G + ++K +G
Sbjct: 249 GLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHP 308
Query: 499 KSF 501
+F
Sbjct: 309 DAF 311
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 222/475 (46%), Gaps = 6/475 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
GI P+ YN ++D+ K +D A +M C P+ TYN+L++G+ + G +++
Sbjct: 209 FGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQ 268
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+++M G + YTY LI+GFC E F ++E M R P +T +L++
Sbjct: 269 AKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMY 328
Query: 124 GVFRCLDPHKAFELLIRF--MEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRG 180
G+ + + + + +RF M + T +V N+LLY SEA + ++ R
Sbjct: 329 GLCKWV---QVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRD 385
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P T++ + L L+ + +G+ P TY +L+ +K G
Sbjct: 386 LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ N + L + +YN I K+ A + EM P+++T+N +
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ + +LL ++ G PD T+ S+I+ + A + +EM+ GV P+
Sbjct: 506 CQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSV 565
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TY +LI + A + + F KM + ++ T+NA+I C ++++A K F
Sbjct: 566 VTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDE 625
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
M G+ P+ FSY+ LI G ++EA + + M PDS+T ++ L+ L
Sbjct: 626 MEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/483 (25%), Positives = 211/483 (43%), Gaps = 2/483 (0%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
+ V+D L+ + L L F +M + PD N ++ + ++ +A + ME
Sbjct: 151 HGVVDVLIAGHVXCL--LVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQ 208
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G P V TY ++D +C RV + +L M+ER PN+ T LV+G+ + + +
Sbjct: 209 FGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQ 268
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A L+ + N L+ + EA ++ +M +R P ST++ +
Sbjct: 269 AKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMY 328
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
L + + +K P ++ L+ + G E + + LV
Sbjct: 329 GLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVP 388
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
V +YN +I C +D A + +EM D+ + P++ T+ L++G K V R
Sbjct: 389 TVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFF 448
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+L G KPD+F +N+ I + A EM+ G PP+ ITYN+ + +LC
Sbjct: 449 NEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQ 508
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G+ + L + M +D + PD T+ ++I F + + KA + F ML+ G+ P +Y
Sbjct: 509 GNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTY 568
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ LI A D A F M + + T N I+ L R +EA+ +E
Sbjct: 569 TVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEE 628
Query: 494 RGI 496
+GI
Sbjct: 629 KGI 631
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 153/347 (44%), Gaps = 1/347 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P +N+++ ++ I A+L F ++ P TYN LIHG+C G +D ALR
Sbjct: 352 TPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALR 411
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L K+M G P+++TYTIL++G V+ M + + P+ + + G
Sbjct: 412 LKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEM 471
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ D AF + + + N ++ L EA +L M G +P+
Sbjct: 472 KIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHV 531
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + V L + + + + +GV P TY +L+ A Y + +
Sbjct: 532 TYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKM 591
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ + +NV +YN +I+ C MD A + EM ++ I PN ++ LI+ C
Sbjct: 592 LEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYW 651
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
+ L +L+ +PD FT + + L R ++ A+ C+ +++
Sbjct: 652 EEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH-AVQCVESLIQ 697
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 65/122 (53%)
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
L +F KM + + PD+ N +++ N + KA+ + M G++P +Y+ ++ +
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
K GR D+A + M++ GC P+ T N+++ L ++G E+A +++ G++
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284
Query: 500 SF 501
++
Sbjct: 285 AY 286
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 228/493 (46%), Gaps = 6/493 (1%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+T ++ AL + D A + M+ C PD Y +IH +C G V+EA
Sbjct: 168 VPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAA 227
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L+ +M +G + +V T+ ++ G C R+ E R+++ M R PN T L+ G+
Sbjct: 228 TLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGL 287
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
CL E + R P ++ NT++ R + EAA + MG +G P++
Sbjct: 288 --CLA--SQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDA 343
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + L L +L +G P TY +L+ + + G + R +
Sbjct: 344 HTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGM-WDNIRAMLE 402
Query: 246 VFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
V D+ +S N+ YN +I CK MD A +EM+ + P++ T+NT+I C +
Sbjct: 403 VMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNN 462
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + L LL G + T+N++I L R ++DA+ ++MV G + ++YN
Sbjct: 463 QMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYN 522
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI++LC G+V RS+ L +M I P+ ++N LI C+ ++ A + ML
Sbjct: 523 GLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQ 582
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
L PD +Y+ LI L K G A + + D T N+++ + +A
Sbjct: 583 ELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDA 642
Query: 485 HDIVKTSKERGIS 497
++ + GI+
Sbjct: 643 SMLLNRAVTSGIT 655
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 222/489 (45%), Gaps = 11/489 (2%)
Query: 5 GISPSTRLYNAVIDALVKSN-SIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+SPS R YN V+ A +++ D+ L + + D+ P FT++I +CR+G DE
Sbjct: 131 AVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADE 190
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL +++ M G P+ Y +I C V E +L+ M + T +VH
Sbjct: 191 ALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVH 250
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ +A L+ R M R + + LL L S EA +L G +P
Sbjct: 251 GLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTML------GRVP 304
Query: 184 ESSTFDYTVT---CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
E + + CL+ G L E + +T +G P TY +L+ L K GR
Sbjct: 305 ELNVVLFNTVIGRCLLDG-KLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAM 363
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L + ++ +Y +++ FC+ M D + M D+ ++ NL +N +I
Sbjct: 364 KLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAV 423
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CKD + + + G+KPD T+N++I LC ++ E+A ++ GV N
Sbjct: 424 CKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANA 483
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITYN LI +L G ++ L M S DI ++N LI++ CR ++++
Sbjct: 484 ITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSE 543
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G++P+N SY+ LI L K+ R +A + M PD T N ++ L + G
Sbjct: 544 MAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGW 603
Query: 481 FEEAHDIVK 489
A ++++
Sbjct: 604 MHAALNLLE 612
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 198/441 (44%), Gaps = 6/441 (1%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
+G S +N ++ L + A +M + C P+ TY L+ G+C V+
Sbjct: 235 LMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVE 294
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA ++ ++ L NV + +I ++ E + E M + P+ T L+
Sbjct: 295 EARTMLGRVPEL----NVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILI 350
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGY 181
HG+ + A +LL R ME + +V T LL+ N M A+L M D+G
Sbjct: 351 HGLCKLGRLGSAMKLL-REMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGL 409
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
++ + + +++ + +G KP TY ++ L + E +
Sbjct: 410 SMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEY 469
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
++ + +V+N +YN +I + A + +M + ++V++N LI C
Sbjct: 470 LFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALC 529
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+D V ++ LL + E G KP+ ++N +I LC+ R DAL+ EM+ + P+ +
Sbjct: 530 RDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIV 589
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN LI LC +G + +L L +K+ + + DI T+N LI C+ + A
Sbjct: 590 TYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRA 649
Query: 422 LTLGLRPDNFSYSALIKALIK 442
+T G+ P+ ++ +++ ++
Sbjct: 650 VTSGITPNERTWGIMVQNFVR 670
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIE 412
+ V P+ +YN ++ + L L+++M DR+ P +TF+ ++ CR+ + +
Sbjct: 130 FAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRAD 189
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
+A SM G PD Y +I AL G +EA M GC+ D T N I+
Sbjct: 190 EALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIV 249
Query: 473 ETLVQQGRFEEAHDIVKTSKERG 495
L GR EA +V RG
Sbjct: 250 HGLCTLGRLREAARLVDRMMIRG 272
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 223/496 (44%), Gaps = 39/496 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++I VK +D A+ F +M P N +I +C++ +D+A
Sbjct: 186 GLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKA 244
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+V++M G AP+++TY+++IDG C +K + + RVLE M E PN T SL+HG
Sbjct: 245 ESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHG 304
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
Y +S M +E+ + ++M G +P
Sbjct: 305 ---------------------------------YSIS--GMWNESVRVFKQMSSCGVIPT 329
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY-- 242
+ + L NE I D+ + +G KP +Y ++ A D +
Sbjct: 330 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 389
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
N + + N + +N++I+ + + MMD+A I +M+++ + P+ VTF T+IS C+
Sbjct: 390 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 449
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ +++ G P + + +I C A + +SEM+ +PP +
Sbjct: 450 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 509
Query: 363 Y-NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y + +I +LC G VA + M P++ TFN+L++ +C + +E+A +M
Sbjct: 510 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAM 569
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
++G+ P+ + Y L+ K+GR D+A F M G P S ++IL L Q R
Sbjct: 570 ASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRT 629
Query: 482 EEAHDIVKTSKERGIS 497
A + E G +
Sbjct: 630 TAAKKMFHEMIESGTT 645
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/537 (24%), Positives = 238/537 (44%), Gaps = 44/537 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P Y+ +ID L KS ++D A +QM +P+ TYN LIHG G+ +E+
Sbjct: 255 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 314
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+R+ KQM G P V I R E + + M + P+ + +++HG
Sbjct: 315 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 374
Query: 125 VF----RCL-DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
CL D H F L+ + + K V N L+ + M +A I M ++
Sbjct: 375 YATATDSCLADVHNIFNLM---LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 431
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEA---------- 229
G +P++ TF ++ L L++ + + GV P + Y L++
Sbjct: 432 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 491
Query: 230 --------------------------LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
L K GR EG ++ + + NV ++N +++
Sbjct: 492 KELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLME 551
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
+C V M+ A + M I PN + TL+ G+CK+ + + +L G KP
Sbjct: 552 GYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 611
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
++ ++ L +A R A EM+E G + TY +++ LC + L
Sbjct: 612 TSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLL 671
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+K+ A + DI TFN +I + ++ + ++A++ F ++ T GL P+ +YS +I LIK
Sbjct: 672 EKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKE 731
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
++EA F+S+E++G DS N I+ L+ + +A + + E ++ ++
Sbjct: 732 ESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEA 788
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 187/414 (45%), Gaps = 11/414 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P+ ++N +I+A + +D A L F+ M PD T+ +I +CRIG +D+A
Sbjct: 397 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 456
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT-VRSLVH 123
L M +G P+ Y LI G CN + + ++ M +++ P S+++
Sbjct: 457 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 516
Query: 124 GV---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLL--YRLSNNSMASEAAAILRKMGD 178
+ R + +++++ +R + + N+L+ Y L N EA A+L M
Sbjct: 517 NLCKEGRVAEGKDIMDMMVQTGQRPNV---VTFNSLMEGYCLVGN--MEEAFALLDAMAS 571
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P + V +++ + + +GVKP Y +++ L++A R
Sbjct: 572 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA 631
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + + ++++Y +V+ C+ N D A + ++ ++ +++TFN +IS
Sbjct: 632 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 691
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
K + +EL + G P+ T++ MI L + +E+A + + + G
Sbjct: 692 AMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHAS 751
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
++ N ++R L +VA++ + + ++ + T + L F R I+
Sbjct: 752 DSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIK 805
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 141/308 (45%), Gaps = 38/308 (12%)
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
R P TY +L++ + R G + + K+ L + SY+++ F K +D+
Sbjct: 150 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG-FVKDGEVDK 208
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + EM ++ + P ++ N++I CK E+ K ++ +++ G PD FT++ +ID
Sbjct: 209 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 268
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
LC++ + A L +MVE G PN+ITYN LI G S+R+F++M + + P
Sbjct: 269 GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIP 328
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA------------------ 435
+ N+ I + + + +A+ F SM+ G +PD SYS
Sbjct: 329 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN 388
Query: 436 -------------------LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
LI A + G D+A F M+ G PD+ T ++ +L
Sbjct: 389 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 448
Query: 477 QQGRFEEA 484
+ GR ++A
Sbjct: 449 RIGRLDDA 456
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 222/475 (46%), Gaps = 6/475 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
GI P+ YN ++D+ K +D A +M C P+ TYN+L++G+ + G +++
Sbjct: 209 FGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQ 268
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+++M G + YTY LI+GFC E F ++E M R P +T +L++
Sbjct: 269 AKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMY 328
Query: 124 GVFRCLDPHKAFELLIRF--MEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRG 180
G+ + + + + +RF M + T +V N+LLY SEA + ++ R
Sbjct: 329 GLCKWV---QVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRD 385
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P T++ + L L+ + +G+ P TY +L+ +K G
Sbjct: 386 LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ N + L + +YN I K+ A + EM P+++T+N +
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ + +LL ++ G PD T+ S+I+ + A + +EM+ GV P+
Sbjct: 506 CQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSV 565
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TY +LI + A + + F KM + ++ T+NA+I C ++++A K F
Sbjct: 566 VTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDE 625
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
M G+ P+ FSY+ LI G ++EA + + M PDS+T ++ L+ L
Sbjct: 626 MEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/483 (25%), Positives = 211/483 (43%), Gaps = 2/483 (0%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
+ V+D L+ + L L F +M + PD N ++ + ++ +A + ME
Sbjct: 151 HGVVDVLIAGHVXCL--LVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQ 208
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G P V TY ++D +C RV + +L M+ER PN+ T LV+G+ + + +
Sbjct: 209 FGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQ 268
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A L+ + N L+ + EA ++ +M +R P ST++ +
Sbjct: 269 AKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMY 328
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
L + + +K P ++ L+ + G E + + LV
Sbjct: 329 GLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVP 388
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
V +YN +I C +D A + +EM D+ + P++ T+ L++G K V R
Sbjct: 389 TVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFF 448
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+L G KPD+F +N+ I + A EM+ G PP+ ITYN+ + +LC
Sbjct: 449 NEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQ 508
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G+ + L + M +D + PD T+ ++I F + + KA + F ML+ G+ P +Y
Sbjct: 509 GNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTY 568
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ LI A D A F M + + T N I+ L R +EA+ +E
Sbjct: 569 TVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEE 628
Query: 494 RGI 496
+GI
Sbjct: 629 KGI 631
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 153/347 (44%), Gaps = 1/347 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P +N+++ ++ I A+L F ++ P TYN LIHG+C G +D ALR
Sbjct: 352 TPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALR 411
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L K+M G P+++TYTIL++G V+ M + + P+ + + G
Sbjct: 412 LKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEM 471
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ D AF + + + N ++ L EA +L M G +P+
Sbjct: 472 KIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHV 531
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + V L + + + + +GV P TY +L+ A Y + +
Sbjct: 532 TYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKM 591
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ + +NV +YN +I+ C MD A + EM ++ I PN ++ LI+ C
Sbjct: 592 LEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYW 651
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
+ L +L+ +PD FT + + L R ++ A+ C+ +++
Sbjct: 652 EEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH-AVQCVESLIQ 697
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 9/181 (4%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
FK +F F +++D L A + +V + + ++LI G V L
Sbjct: 115 FKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHG---VVDVLIA-----GHVX-CL 165
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
+F KM + + PD+ N +++ N + KA+ + M G++P +Y+ ++ +
Sbjct: 166 LVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSY 225
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
K GR D+A + M++ GC P+ T N+++ L ++G E+A +++ G++ +
Sbjct: 226 CKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSA 285
Query: 501 F 501
+
Sbjct: 286 Y 286
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 223/496 (44%), Gaps = 39/496 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++I VK +D A+ F +M P N +I +C++ +D+A
Sbjct: 130 GLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKA 188
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+V++M G AP+++TY+++IDG C +K + + RVLE M E PN T SL+HG
Sbjct: 189 ESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHG 248
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
Y +S M +E+ + ++M G +P
Sbjct: 249 ---------------------------------YSIS--GMWNESVRVFKQMSSCGVIPT 273
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY-- 242
+ + L NE I D+ + +G KP +Y ++ A D +
Sbjct: 274 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 333
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
N + + N + +N++I+ + + MMD+A I +M+++ + P+ VTF T+IS C+
Sbjct: 334 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 393
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ +++ G P + + +I C A + +SEM+ +PP +
Sbjct: 394 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 453
Query: 363 Y-NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y + +I +LC G VA + M P++ TFN+L++ +C + +E+A +M
Sbjct: 454 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAM 513
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
++G+ P+ + Y L+ K+GR D+A F M G P S ++IL L Q R
Sbjct: 514 ASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRT 573
Query: 482 EEAHDIVKTSKERGIS 497
A + E G +
Sbjct: 574 TAAKKMFHEMIESGTT 589
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/537 (24%), Positives = 238/537 (44%), Gaps = 44/537 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P Y+ +ID L KS ++D A +QM +P+ TYN LIHG G+ +E+
Sbjct: 199 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 258
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+R+ KQM G P V I R E + + M + P+ + +++HG
Sbjct: 259 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 318
Query: 125 VF----RCL-DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
CL D H F L+ + + K V N L+ + M +A I M ++
Sbjct: 319 YATATDSCLADVHNIFNLM---LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 375
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEA---------- 229
G +P++ TF ++ L L++ + + GV P + Y L++
Sbjct: 376 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 435
Query: 230 --------------------------LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
L K GR EG ++ + + NV ++N +++
Sbjct: 436 KELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLME 495
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
+C V M+ A + M I PN + TL+ G+CK+ + + +L G KP
Sbjct: 496 GYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 555
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
++ ++ L +A R A EM+E G + TY +++ LC + L
Sbjct: 556 TSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLL 615
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+K+ A + DI TFN +I + ++ + ++A++ F ++ T GL P+ +YS +I LIK
Sbjct: 616 EKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKE 675
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
++EA F+S+E++G DS N I+ L+ + +A + + E ++ ++
Sbjct: 676 ESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEA 732
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 187/414 (45%), Gaps = 11/414 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P+ ++N +I+A + +D A L F+ M PD T+ +I +CRIG +D+A
Sbjct: 341 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 400
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT-VRSLVH 123
L M +G P+ Y LI G CN + + ++ M +++ P S+++
Sbjct: 401 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 460
Query: 124 GV---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLL--YRLSNNSMASEAAAILRKMGD 178
+ R + +++++ +R + + N+L+ Y L N EA A+L M
Sbjct: 461 NLCKEGRVAEGKDIMDMMVQTGQRPNV---VTFNSLMEGYCLVGN--MEEAFALLDAMAS 515
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P + V +++ + + +GVKP Y +++ L++A R
Sbjct: 516 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA 575
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + + ++++Y +V+ C+ N D A + ++ ++ +++TFN +IS
Sbjct: 576 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 635
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
K + +EL + G P+ T++ MI L + +E+A + + + G
Sbjct: 636 AMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHAS 695
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
++ N ++R L +VA++ + + ++ + T + L F R I+
Sbjct: 696 DSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIK 749
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 141/308 (45%), Gaps = 38/308 (12%)
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
R P TY +L++ + R G + + K+ L + SY+++ F K +D+
Sbjct: 94 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG-FVKDGEVDK 152
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + EM ++ + P ++ N++I CK E+ K ++ +++ G PD FT++ +ID
Sbjct: 153 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 212
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
LC++ + A L +MVE G PN+ITYN LI G S+R+F++M + + P
Sbjct: 213 GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIP 272
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA------------------ 435
+ N+ I + + + +A+ F SM+ G +PD SYS
Sbjct: 273 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN 332
Query: 436 -------------------LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
LI A + G D+A F M+ G PD+ T ++ +L
Sbjct: 333 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 392
Query: 477 QQGRFEEA 484
+ GR ++A
Sbjct: 393 RIGRLDDA 400
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 129/512 (25%), Positives = 220/512 (42%), Gaps = 44/512 (8%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
NA++ LV + D A F+++ P+ TYN+LI G C+ G + +A+ + M+
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G PN T L+ G C +++ ++ M+ P A+ L+ G F
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 134 AFELLIRFMEREPL----TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
A L + T LV L + + + +A ++M G P+ ++
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
++ L + E + F P TY +LM+ K G+ E + + K
Sbjct: 181 ILLSALSDSGRMAEAHAL---FSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
NV +Y+++I+C+CK++ ++ A E+ +M + + PN VTFNTLI+G CK +
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCR-------------------------------- 337
+L + + G K T+N++ID LC+
Sbjct: 298 IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQ 357
Query: 338 ----AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
A R +A+ EM E PN ITY+ILI LC + + + + + M+A +P
Sbjct: 358 GFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTP 416
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
+ T+ LI FC+ +++ A F M G P+ ++ LI L K+ R ++ +
Sbjct: 417 TVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLL 476
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
M GC PD T N ++ L R E+A
Sbjct: 477 CHMHAEGCKPDVITYNCLISGLCSANRVEDAQ 508
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 131/525 (24%), Positives = 220/525 (41%), Gaps = 53/525 (10%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ YN +I K + A F M P+ T N L+ G+C IG + AL+
Sbjct: 29 APNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALK 88
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L ++M+ + P ++ IL+ GF A RV + L+ M++ + T ++ G+
Sbjct: 89 LFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGL- 147
Query: 127 RCLDPHKA--FELLIRFMER------EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
C + A E + F + EP + + LL LS++ +EA A+ M
Sbjct: 148 -CWENKSANRLEQAMEFFKEMKASGVEPDLESY--HILLSALSDSGRMAEAHALFSAMTC 204
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
P+ T++ + E ++ +K G +P TY +++ K + E
Sbjct: 205 S---PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEE 261
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + V N ++N +I FCK M++ A ++ EM +VT+NTLI
Sbjct: 262 AWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLID 321
Query: 299 GHCKD-AEVHKTRELLVMLLECGFKPDKFTFNSMI------------------------- 332
CK V+ +L L G P T+NS+I
Sbjct: 322 SLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAP 381
Query: 333 ---------DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D LC+ R ++A L +M G P +TY LI C G++ +L F
Sbjct: 382 NVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFF 441
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+KM+ +P+ FN LI C+ + + M G +PD +Y+ LI L +
Sbjct: 442 EKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSA 501
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
R ++A++ F M C P+ T N ++ L Q + EEA +I+
Sbjct: 502 NRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEARNIL 543
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 201/452 (44%), Gaps = 44/452 (9%)
Query: 49 NILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
N L+ G+ D+ALRL K++ +APN +TY +LI GFC ++ + V MK
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE 168
+ PN +T+ NTLL L S
Sbjct: 61 SGLLPNASTM-----------------------------------NTLLLGLCEIGQMSS 85
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A + R+M +LP S++ + + + + L K TY L+++
Sbjct: 86 ALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLK 145
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVN----SYNMVIDCFCKVNMMDRATEICREMRDR 284
L + FK+ S V SY++++ M A + M
Sbjct: 146 GLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAM--- 202
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
+P+++T+N L+ G+CK + ++ + L+ +L+ G++P+ FT++ +I+C C+ + E+A
Sbjct: 203 TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEA 262
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
+ +M+E PN +T+N LI C G + +++LF +M+ I T+N LI S
Sbjct: 263 WEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDS 322
Query: 405 FCRM-NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
C+ + A F + GL P +Y++LI+ + R EA Q F ME C P
Sbjct: 323 LCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAP 381
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ T +++++ L + R +EA ++ K G
Sbjct: 382 NVITYSILIDGLCKVRRMKEAAKTLEDMKAHG 413
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 4/172 (2%)
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N+++ L A + + AL E++ PN TYN+LIR C G + +++ +F M++
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ P+ T N L+ C + ++ A K F M P + S++ L++ +GR +
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQ----GRFEEAHDIVKTSKERGI 496
A M ++ + + T NL+L+ L + R E+A + K K G+
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGV 172
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P+T ++N +ID L K+ + M + CKPD TYN LI G+C V++A
Sbjct: 448 GCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDA 507
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE 104
RL +G+ APNV T+ LI G C K+V E +L+
Sbjct: 508 QRL---FDGMACAPNVTTFNFLIRGLCAQKKVEEARNILD 544
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 231/491 (47%), Gaps = 22/491 (4%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
RLY AL+ + +++ A V QC F N G + EA+ +V +
Sbjct: 135 RLYIVSATALIGNKNLERAN------EVMQCMVMNFAEN---------GKLKEAVNMVVE 179
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG---VFR 127
M+ G + T ++D V + M +R V P+ + + +V + R
Sbjct: 180 MQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGR 239
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
L+ K ++ ER + C ++ + KM + G P
Sbjct: 240 VLEAEKWLNAMV---ERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVIN 296
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR-YLNHV 246
F + L + + +L+ ++RG KP T+ L++ L K G + R +L V
Sbjct: 297 FTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLV 356
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
D NV++Y +I+ +CK + ++RA + M+++ + PN T+ TLI GHCK
Sbjct: 357 RSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNF 416
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ EL+ ++ + GF P+ +T+N++ID LC+ ++A L+++ G+ + +TY IL
Sbjct: 417 VRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTIL 476
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ C D RSL F KM +PDI+++ LI FCR +++++E+ F ++LGL
Sbjct: 477 MSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGL 536
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P +Y+++I + G A + F M +GC PDS T ++ L ++ + ++A +
Sbjct: 537 IPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARN 596
Query: 487 IVKTSKERGIS 497
+ ++G+S
Sbjct: 597 LYDAMMDKGLS 607
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 197/425 (46%), Gaps = 1/425 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ ST+ N V+D V +++A F +M PD ++ +++ C +G V EA
Sbjct: 184 GLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEA 243
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + M G+ + T T++ID FC V V M E + PN +L++G
Sbjct: 244 EKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALING 303
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDRGYLP 183
+ + +AFELL + R TL+ L +A + K+ GY P
Sbjct: 304 LCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKP 363
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ + LN +L ++G+ P +TY L++ K G V +
Sbjct: 364 NVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELM 423
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K+ N+ +YN +ID CK +D A + ++ + + VT+ L+S HC+
Sbjct: 424 DLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQ 483
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
A+ +++ +L+ GF PD ++ ++I CR + +++ E V G+ P TY
Sbjct: 484 ADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTY 543
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+I C G+ + +++LFQ+M +PD T+ ALI C+ +K++ A + +M+
Sbjct: 544 TSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMD 603
Query: 424 LGLRP 428
GL P
Sbjct: 604 KGLSP 608
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 186/420 (44%), Gaps = 39/420 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G++P+ + A+I+ L K SI A+ ++M KP+ +T+ LI G+C+ G ++
Sbjct: 288 MGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEK 347
Query: 64 ALRL-VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A RL +K + GY PNV+TYT +I+G+C ++ +L M+E+ + PN T +L+
Sbjct: 348 AFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLI 407
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G + + +A+EL + MG G+
Sbjct: 408 DGHCKVGNFVRAYEL-----------------------------------MDLMGKEGFS 432
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T++ + L L+E +L+ G++ TY +LM + +
Sbjct: 433 PNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVF 492
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
N + K +++SY +I FC+ M + + E + P T+ ++I G+C+
Sbjct: 493 FNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCR 552
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+L + G PD T+ ++I LC+ + +DA + M++ G+ P +T
Sbjct: 553 YGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVT 612
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
L C D + ++ + +++ + I T N L++ C K++ A F +L
Sbjct: 613 RLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKLL 669
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 3/176 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G +P Y +I + + + F++ P + TY +I G CR G
Sbjct: 499 VGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSL 558
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A++L ++M G AP+ TY LI G C ++ + + + M ++ + P E T +L +
Sbjct: 559 AVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAY 618
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+ D A +L R +R+ + NTL+ +L + AA K+ D+
Sbjct: 619 EYCKKDDSSTAINVLDRLEKRQWIR---TVNTLVRKLCSEGKLDMAALFFHKLLDK 671
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 216/468 (46%)
Query: 29 AYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILID 88
A F M + + P F +N ++ + + L KQ E G P++ T +ILI+
Sbjct: 41 AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
FC+ + F V + +R PN T+ +L+ G+ + KA + + +
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL 160
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
++ TL+ L A +LRK+ P+ ++ + L L + C +
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY 220
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
I +G+ P TY L+ G E LN + + NV ++N++ID K
Sbjct: 221 SEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKE 280
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
M A + M I P++ T+N+LI G+ EV + + + + G PD +
Sbjct: 281 GKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCY 340
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+MI+ LC+ ++A+ EM + P+ +TYN LI LC + R++ L ++M+
Sbjct: 341 TNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKE 400
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
I PD+Y++ L+ C+ ++E A++ F +L G + +Y+ LI L K+G FDE
Sbjct: 401 QGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDE 460
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
A ME GC PD+ T ++I+ L ++ ++A I++ RG+
Sbjct: 461 ALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 199/423 (47%), Gaps = 2/423 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P + +I+ I LA+ F + P+ T N LI G+C G + +A
Sbjct: 87 GITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKA 146
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L Q+ G+ + +Y LI+G C V R+L ++ +V P+ ++++
Sbjct: 147 LYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINS 206
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A ++ + + + TL++ EA ++L +M + P
Sbjct: 207 LCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPN 266
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + L + E +L +K +KP TY L++ Y +V+ +Y+
Sbjct: 267 VCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDG-YFLVDEVKHAKYVF 325
Query: 245 HVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ R V+ +V Y +I+ CK M+D A + EM+ +++ P++VT+N+LI G CK+
Sbjct: 326 YSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKN 385
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + L + E G +PD +++ ++D LC++ R EDA + ++ G N Y
Sbjct: 386 HHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAY 445
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+LI LC G +L L KM+ PD TF+ +I++ ++ +KAEK M+
Sbjct: 446 TVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIA 505
Query: 424 LGL 426
GL
Sbjct: 506 RGL 508
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 204/454 (44%), Gaps = 2/454 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P T +N ++ +LV + F+Q + PD T +ILI+ C + A +
Sbjct: 55 PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ G+ PN T LI G C + + + + + ++ + +L++G+ +
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ KA L+R +E + +V NT++ L N + +A + +M +G P+
Sbjct: 175 TGET-KAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVV 233
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L E +L+ + + P T+ +L++AL K G+ E L +
Sbjct: 234 TYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVM 293
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K + +V +YN +ID + V+ + A + M R + P++ + +I+G CK V
Sbjct: 294 MKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMV 353
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ L + PD T+NS+ID LC+ H E A+ M E G+ P+ +Y IL
Sbjct: 354 DEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTIL 413
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ LC G + + +FQ++ A +++ + LI C+ ++A M G
Sbjct: 414 LDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGC 473
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
PD ++ +I+AL + D+A++ M G
Sbjct: 474 MPDAVTFDIIIRALFEKDENDKAEKILREMIARG 507
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 64/176 (36%), Gaps = 35/176 (19%)
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
PP T +N ++ SL + LF++ + + I+PD+ T + LI FC I A
Sbjct: 54 PPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFS 113
Query: 417 AFFSMLTLGLRP-----------------------------------DNFSYSALIKALI 441
F ++L G P D SY LI L
Sbjct: 114 VFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLC 173
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
K+G + +E + PD N I+ +L + +A D+ +GIS
Sbjct: 174 KTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGIS 229
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 218/476 (45%), Gaps = 54/476 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ ++N+++ +LV+SN + A+L F ++ ++ K D +++ I+I G C G +D++
Sbjct: 123 GLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELK-ERVKFDVYSFGIMIKGCCENGNLDKS 181
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L+ ++ +G +PNV YT LIDG C + + M E + N+ T L++G
Sbjct: 182 FQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLING 241
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F+ + + + KM G P
Sbjct: 242 LFK-----------------------------------KGLKKDGFDLFEKMKINGLFPN 266
Query: 185 SSTFDYTVTCLVTGLDLNETCG---------ILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
YT CL +NE CG + D +RGV+ TY L+ + + R
Sbjct: 267 L----YTYNCL-----MNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREER 317
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
E ++ ++ + K + N+ +YN +I FC V +D+A+ + +++ ++P+LVT+N
Sbjct: 318 VWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNI 377
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
LI G+ K +L + G P K T +ID R E A S M ++G
Sbjct: 378 LIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFG 437
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ P+ Y +LI LC G++ S +LF+ M + P +N +I +C+ + +A
Sbjct: 438 LVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRAL 497
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
+ M GL P+ SYS++I L K G+++EA+ M + P + N+I
Sbjct: 498 RLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/486 (23%), Positives = 214/486 (44%), Gaps = 62/486 (12%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQC---KPDRFTYNILIHGICRIGVVDEALRLV 68
LY ++I+A +KS +D A + F +M VD+ +P+ F N L+ + R ++A
Sbjct: 95 LYESIINAHLKSQLLDKALIFFNEM-VDKGLVFRPNIF--NSLLGSLVRSNCFEKAWLFF 151
Query: 69 KQM-EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ E + + +VY++ I+I G C + + F++L ++++ + PN +L+ G +
Sbjct: 152 NELKERVKF--DVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCK 209
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D +A + E + + L+ L + + + KM G P
Sbjct: 210 NGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNL-- 267
Query: 188 FDYTVTCLVTGLDLNETCG---------ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
YT CL +NE CG + D +RGV+
Sbjct: 268 --YTYNCL-----MNEYCGEGKICRAFDLFDEMRERGVE--------------------- 299
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+NV +YN +I C+ + A ++ +M+ ++PNL+T+NTLI
Sbjct: 300 --------------ANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIG 345
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G C + K LL L G P T+N +I+ +A ++ D EM G+ P
Sbjct: 346 GFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISP 405
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ +T +LI + + ++ ++ +++ M+ + PD+Y + LI C ++++ K F
Sbjct: 406 SKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLF 465
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
SM + + P + Y+ +I K A + ME G P+ + + I+ L +
Sbjct: 466 RSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKD 525
Query: 479 GRFEEA 484
G++EEA
Sbjct: 526 GKWEEA 531
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 185/367 (50%), Gaps = 2/367 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP+ +Y +ID K+ I+ A L F +M +++T+ +LI+G+ + G+ +
Sbjct: 191 MGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKD 250
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L ++M+ G PN+YTY L++ +C ++ F + + M+ER V N T +L+
Sbjct: 251 GFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIG 310
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ R +A E L+ M++ ++ L+ NTL+ + +A+++L ++ G
Sbjct: 311 GMCREERVWEA-EKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLS 369
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T++ + + + RG+ P T +L++A + + +
Sbjct: 370 PSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQI 429
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + K LV +V Y ++I C M ++++ R M + + P+ V +NT+I G+CK
Sbjct: 430 YSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCK 489
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ ++ LL + G P+ +++S+I LC+ ++E+A L +M+E + P+
Sbjct: 490 EDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASI 549
Query: 363 YNILIRS 369
N++ ++
Sbjct: 550 LNMISKA 556
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 178/372 (47%), Gaps = 18/372 (4%)
Query: 129 LDPHK---AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
LD HK A L+++ + + + +LL+ L+ N S A+L
Sbjct: 48 LDHHKLPHAQSLILQILSNKISSPFFTVPSLLHHLTQNQNPSMTTALL------------ 95
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
++ + + L++ + + +G+ R + + L+ +L ++ + + N
Sbjct: 96 --YESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNE 153
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ K+R+ +V S+ ++I C+ +D++ ++ ++D ++PN+V + TLI G CK+ +
Sbjct: 154 L-KERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGD 212
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + R + E G +++TF +I+ L + +D D +M G+ PN TYN
Sbjct: 213 IERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNC 272
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L+ C G + R+ LF +M+ + ++ T+N LI CR ++ +AEK M
Sbjct: 273 LMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAA 332
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ P+ +Y+ LI G D+A ++ NG +P T N+++E + G ++
Sbjct: 333 VSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVA 392
Query: 486 DIVKTSKERGIS 497
D+ + + RGIS
Sbjct: 393 DLAREMEGRGIS 404
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 139/560 (24%), Positives = 233/560 (41%), Gaps = 61/560 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + +YN +I+ L K ++ Q+M +PD+++YN LI G CR G + +A
Sbjct: 354 GIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKA 413
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + M G A TY L+ GFC+ + + R+ +M +R V PNE + +L+ G
Sbjct: 414 FEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDG 473
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAIL----------- 173
+F+ +A L + R + NT++ L +EA +L
Sbjct: 474 LFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPD 533
Query: 174 ------------------------RKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
KM G+ P F+ +T ++ I
Sbjct: 534 SLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHS 593
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
RG+ P TY L+ K G E + + + NV + ++ CF K
Sbjct: 594 EMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEG 653
Query: 270 MMDRATEICREMRDRDIAPNL--------------------------VTFNTLISGHCKD 303
+D A + +++ + D+ P V +N +I G CK
Sbjct: 654 KVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKS 713
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + L L F PD FT++S+I + ++A M+ G+ PN ITY
Sbjct: 714 GRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITY 773
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI LC G ++R++ LF K+Q+ ISP+ T+N LI +C+ K +A K M+
Sbjct: 774 NSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVE 833
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G++P +YS LI L G +EA + M +N +P+ T ++ ++ G EE
Sbjct: 834 EGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEE 893
Query: 484 AHDIVKTSKERGISFKSFPG 503
+ RG+ ++ G
Sbjct: 894 ISKLYDEMHIRGLLPTNWIG 913
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 222/491 (45%), Gaps = 9/491 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G PS R N +++ LV+S +A + + QM + PD FT I+ CR G V +
Sbjct: 177 VGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQ 236
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ V++MEG+G N+ Y ++D +C + R+LE ++ + + PN T LV
Sbjct: 237 AVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVK 296
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS-----EAAAILRKMGD 178
G C D E R ++ T +V + + Y + N +A + +M D
Sbjct: 297 GY--CKDGR--MEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRD 352
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G ++ + L + E +L G++P +Y L++ + G +
Sbjct: 353 AGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRK 412
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ ++ L + +YN ++ FC ++ +D A + M R +APN ++ +TL+
Sbjct: 413 AFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLD 472
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G K + + L L G + TFN++I+ LC+ R +A + L M E PP
Sbjct: 473 GLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPP 532
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+++TY L C +G + + L KM+ +P + FN+ I + K
Sbjct: 533 DSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIH 592
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M GL P+ +Y ALI K G EA + M NG NP+ + + ++ ++
Sbjct: 593 SEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKE 652
Query: 479 GRFEEAHDIVK 489
G+ +EA+ +++
Sbjct: 653 GKVDEANLVLQ 663
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 130/521 (24%), Positives = 227/521 (43%), Gaps = 29/521 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKPDRFTYNILIHGICRIGVVDE 63
G+SP+ Y ++ K ++ A ++M D Y ++I+G C+ G +D+
Sbjct: 283 GLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDD 342
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A R+ +M G N++ Y +I+G C R+ EV +VL+ M++ + P++ + +L+
Sbjct: 343 ATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLID 402
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQK-LVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G R KAFE+ R M R L L NTLL + +A + M RG
Sbjct: 403 GYCREGSMRKAFEM-CRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVA 461
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P + + L + + + RG+ T+ ++ L K GR E +
Sbjct: 462 PNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEEL 521
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L+ + + R + +Y + D +CK+ + AT + +M AP++ FN+ I+GH
Sbjct: 522 LDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFI 581
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ HK ++ + G P+ T+ ++I C+ +A + EMV G+ PN
Sbjct: 582 AKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFI 641
Query: 363 YNILIRSLCAIGDVARSLRLFQKM--------------QADRISPDIYT----------- 397
+ L+ G V + + QK+ + D+IS + T
Sbjct: 642 CSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANV 701
Query: 398 -FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
+N +I C+ +I A+ F S+ PDNF+YS+LI SG DEA M
Sbjct: 702 MWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVM 761
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G P+ T N ++ L + G+ A ++ + +GIS
Sbjct: 762 LSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGIS 802
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 205/465 (44%), Gaps = 44/465 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++ + +N VI+ L K + A +M +C PD TY L G C++G + A
Sbjct: 494 GLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTA 553
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +ME LG+AP+V + I G AK+ +V + M R + PN T +L+ G
Sbjct: 554 THLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAG 613
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + H+A L + +C+ L+ EA +L+K+ + +P
Sbjct: 614 WCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIP- 672
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
C ++ +++++ ++DT +G+ +
Sbjct: 673 --------GCSISTIEIDKISHVVDTI-------------------------ADGNPHSA 699
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+V +N++I CK + A + +R++ P+ T+++LI G
Sbjct: 700 NVM----------WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASG 749
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L ++L G P+ T+NS+I LC++ + A++ +++ G+ PN ITYN
Sbjct: 750 SIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYN 809
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C G + +L QKM + I P + T++ LI C +E+A K M+
Sbjct: 810 TLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIEN 869
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
+ P+ +Y LI IKSG +E + + M G P ++ N
Sbjct: 870 NVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN 914
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 202/428 (47%), Gaps = 10/428 (2%)
Query: 82 TYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF 141
++ +L+ +A +++ V + M + P+ + L++ + + DP A + +
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM 209
Query: 142 MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
L + + + ++A + +M G + + C G+
Sbjct: 210 RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYC-GMGW 268
Query: 202 NETCG-ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK--DRLVSNVNSY 258
E IL++ ++G+ P TY LL++ K GR E +R + + + D +V V +Y
Sbjct: 269 TEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEV-AY 327
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
M+I+ +C+ MD AT + EMRD I NL +NT+I+G CK + + +++L + +
Sbjct: 328 GMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMED 387
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
G +PDK+++N++ID CR A + MV G+ T+TYN L++ C++ +
Sbjct: 388 VGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDD 447
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+LRL+ M ++P+ + + L+ + K E+A + L GL + +++ +I
Sbjct: 448 ALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVIN 507
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS- 497
L K GR EA++ M++ C PDS T + + + G+ A ++ + G +
Sbjct: 508 GLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAP 567
Query: 498 ----FKSF 501
F SF
Sbjct: 568 SVEMFNSF 575
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 106/249 (42%), Gaps = 36/249 (14%)
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKT-------------------RELLVMLLE------ 318
RD + V+F+ L+ H ++ LL L++
Sbjct: 142 RDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGM 201
Query: 319 ----------CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
G PD+FT M CR R A++ + EM G+ N + Y+ ++
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMD 261
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG-LR 427
C +G + R+ + +Q +SP++ T+ L++ +C+ ++E+AE+ M G +
Sbjct: 262 CYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIV 321
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
D +Y +I + GR D+A + M G + + + N ++ L + GR EE +
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381
Query: 488 VKTSKERGI 496
++ ++ G+
Sbjct: 382 LQEMEDVGM 390
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 127/314 (40%), Gaps = 26/314 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+SP+ Y A+I K ++ A + +M + P+ F + L+ + G
Sbjct: 595 MSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGK 654
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID--------------------------GFCNAK 94
VDEA +++++ + P TI ID G C +
Sbjct: 655 VDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSG 714
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCN 154
R+A+ + E ++ + P+ T SL+HG +AF L + + N
Sbjct: 715 RIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYN 774
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
+L+Y L + S A + K+ +G P T++ + E + ++
Sbjct: 775 SLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEE 834
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G++P TY +L+ L G E + L+ + ++ + N +Y +I + K M+
Sbjct: 835 GIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEI 894
Query: 275 TEICREMRDRDIAP 288
+++ EM R + P
Sbjct: 895 SKLYDEMHIRGLLP 908
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 88/222 (39%), Gaps = 48/222 (21%)
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP--PN-----------TITYNILIR 368
+P + ++ L RA RF DA LS + P P+ +++++L+R
Sbjct: 97 RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLR 156
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
+ G ++ +L +F M P + + N L+ + A + M G+ P
Sbjct: 157 AHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLP 216
Query: 429 DNFSYSALIKALIKSGRF-----------------------------------DEAKQTF 453
D F+ + + KA + GR ++A++
Sbjct: 217 DEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRIL 276
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
S+++ G +P+ T L+++ + GR EEA +VK KE G
Sbjct: 277 ESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG 318
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 129/507 (25%), Positives = 232/507 (45%), Gaps = 9/507 (1%)
Query: 2 SFLGISPSTR---LYNAVIDALVKSNSIDLAYLKFQQMSVD---QCKPDRFTYNILIHGI 55
S L PS R YN V+ AL + D A + MS++ C+P+ +Y +L+ +
Sbjct: 66 SLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRAL 125
Query: 56 CRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNE 115
C + D+A+ L++ M G +V TY LI G C+A V + ++ M E + PN
Sbjct: 126 CADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNV 185
Query: 116 ATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
SL+ G + ++ + E+ ++ L+ L A +A ++
Sbjct: 186 VVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDM 245
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
M RG P T++ + C+ + E G+L ++GV P TY L++ L
Sbjct: 246 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLE 305
Query: 236 DVEGDRYLNHVFKDRLV--SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
E L + + + + NV ++N VI C + M +A ++ M + NLVT+
Sbjct: 306 MDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTY 365
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
N LI G + +V K EL+ + G +PD FT++ +I C+ + + A D LS M +
Sbjct: 366 NLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRD 425
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
G+ P Y L+ ++C G + R+ LF +M + D+ ++ +I C+ ++
Sbjct: 426 RGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKT 484
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A++ S++ GL PD +YS +I KSG + A M +G PD + +++
Sbjct: 485 AKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQ 544
Query: 474 TLVQQGRFEEAHDIVKTSKERGISFKS 500
+G + ++++ + I+ S
Sbjct: 545 GYSTKGEINKVLELIREMITKNIALDS 571
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 205/454 (45%), Gaps = 6/454 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ Y +I L + +D A +M +P+ Y+ L+ G C+ G ++
Sbjct: 145 GVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDV 204
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +M G P+V YT LID C + + V+++M R + PN T L++
Sbjct: 205 GKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINC 264
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM--GDRGYL 182
+ + +A +L + E+ + NTL+ LS+ EA +L +M G
Sbjct: 265 MCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVK 324
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P TF+ + L + + + + G TY LL+ L + + +
Sbjct: 325 PNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMEL 384
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
++ + L + +Y+++I FCK+ +DRA ++ MRDR I P L + L+ C+
Sbjct: 385 MDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCE 444
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + R L ++ F D +++MI C+A + A + L +V+ G+ P+ +T
Sbjct: 445 QGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVT 503
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y+I+I GD+ + + ++M A PD+ F++LIQ + +I K + M+
Sbjct: 504 YSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMI 563
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
T + D+ S L +L+ S +E K S+
Sbjct: 564 TKNIALDSKIISTLSTSLVAS---NEGKALLQSL 594
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 175/353 (49%), Gaps = 5/353 (1%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGY---LPESSTFDYTVTCLVTGLDLNETCGILDT 210
NT+L L A A+LR M + P + ++ + L ++ G+L +
Sbjct: 81 NTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRS 140
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
GV+ TY L+ L A + + + + + NV Y+ ++ +CK
Sbjct: 141 MRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGR 200
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+ ++ EM ++ I P++V + LI CK + K ++ M++ G +P+ T+N
Sbjct: 201 WEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNV 260
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I+C+C+ ++A+ L +M E GV P+ +TYN LI+ L + ++ ++ L ++M +
Sbjct: 261 LINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGK 320
Query: 391 --ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ P++ TFN++IQ C + ++ +A + M G + +Y+ LI L++ + +
Sbjct: 321 NIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRK 380
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
A + M G PDS+T +++++ + + + A D++ T ++RGI + F
Sbjct: 381 AMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELF 433
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 210/462 (45%), Gaps = 38/462 (8%)
Query: 40 QCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV 99
C+PD +YN ++ G C G +D A RLV M P+ YTY LI G C R
Sbjct: 115 SCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNA 171
Query: 100 FRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
VL+ M R P+ T L+ C Y+
Sbjct: 172 LAVLDDMLRRGCVPDVVTYTILLEAT---------------------------CKRSGYK 204
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
+A +L +M D+G P+ T++ V + +++ L + G +P
Sbjct: 205 --------QAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPN 256
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
+Y ++++ L A R + ++ + + + NV ++NM+I C+ +++ A EI
Sbjct: 257 TVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILD 316
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
++ PN +++N ++ CK ++ + + +++ G PD ++N+++ LCR
Sbjct: 317 QIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGG 376
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ A++ L ++ + G P I+YN +I L G +L L +M + PDI T++
Sbjct: 377 EVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYS 436
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
+ CR +IE+A KAF + +G+RP+ Y+A++ L K A F M N
Sbjct: 437 TISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSN 496
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
GC P+ T +++E L +G +EA +++ RG+ K+
Sbjct: 497 GCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTL 538
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 182/426 (42%), Gaps = 35/426 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ + + P T YN +I L D A M C PD TY IL+ C+
Sbjct: 143 VAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSG 202
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+A++L+ +M G AP++ TY ++++G C RV + L+ + PN +
Sbjct: 203 YKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSY-- 260
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
N +L L +A ++ +M +G
Sbjct: 261 ---------------------------------NIVLKGLCTAERWEDAEKLMAEMSRKG 287
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P TF+ ++ L + ILD K G P +Y ++ A K +
Sbjct: 288 RPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAM 347
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
++ + ++ SYN ++ C+ +D A E+ +++D+ P L+++NT+I G
Sbjct: 348 AFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGL 407
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K + + ELL ++ G +PD T++++ LCR R E+A+ ++ + G+ PNT
Sbjct: 408 TKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNT 467
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ YN ++ LC ++ LF M ++ P+ T+ LI+ +++A +
Sbjct: 468 VLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAE 527
Query: 421 MLTLGL 426
+ + G+
Sbjct: 528 LCSRGV 533
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 32/170 (18%)
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKM-------------------------QAD 389
VP + N +R L GD+ ++RL + M +A
Sbjct: 51 AVPHRSAASNDRLRVLVRRGDLEEAIRLVESMAGLEPSAAGPCAALIKKLCASGRTAEAR 110
Query: 390 RI----SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
R+ PD+ ++NA++ +C +++ A + +M + PD ++Y+ LI+ L GR
Sbjct: 111 RVLASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGR 167
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
D A M + GC PD T ++LE ++ +++A ++ +++G
Sbjct: 168 TDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKG 217
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 234/531 (44%), Gaps = 47/531 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
++PS R YNAV+ L +++ A L +++M D+ P FT+ + +CR+G +A
Sbjct: 140 AVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDA 199
Query: 65 LRLVKQMEGLGYAPNVYTYTILID-----------------------------------G 89
L L++ M G P+ Y +I G
Sbjct: 200 LALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLG 259
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C V E R+++ M P+ T L+ G+ R +A+ +L R P
Sbjct: 260 LCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRV----PEVN 315
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCG--- 206
++ NT++ + A + MG +G P+ T++ L+ GL CG
Sbjct: 316 VVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNI----LMHGLCKLGRCGSAV 371
Query: 207 -ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
+LD ++G P TY L+ + + G + L+ + N YN +I
Sbjct: 372 RMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYAL 431
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
K +D A + +EM+ + P++ T+NT+I C + ++ + + LLE G +
Sbjct: 432 GKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANG 491
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T+N++I L + R+++ L +EMV G P + ++YN LI++LC G+V RS+ L ++
Sbjct: 492 ITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEE 551
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M I P+ +++N LI C+ K+ A + ML GL PD +Y+ LI L K G
Sbjct: 552 MMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGW 611
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
A + +PD T N+++ + ++A ++ + GI
Sbjct: 612 THAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGI 662
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 214/469 (45%), Gaps = 31/469 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P LY VI ALV + A +M + C D T+N ++ G+C +G V EA
Sbjct: 210 GCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREA 269
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL--------------------- 103
RLV +M G P+V TY L+ G C ++ E + +L
Sbjct: 270 ARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAE 329
Query: 104 ----------EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC 153
E+M + P+ T L+HG+ + A +L E+ +
Sbjct: 330 GKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTY 389
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
+TLL+ N M +A A+L +M +G+ S ++ + L L+E ++
Sbjct: 390 STLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKS 449
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
+G KP TY ++ L + E + ++ ++ +V+N +YN +I
Sbjct: 450 QGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQE 509
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
+ EM ++V++N LI CK+ V ++ LL ++ G KP+ F++N +I+
Sbjct: 510 GLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLIN 569
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
LC+A + DAL+ EM+ G+ P+ +TYN LI LC +G +L L +K+ + + P
Sbjct: 570 ELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHP 629
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
DI T+N LI C++ ++ A ++ G+ P+ ++ +++ ++
Sbjct: 630 DIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVR 678
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 196/459 (42%), Gaps = 39/459 (8%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P +YN ++ + R +AL L ++M P +T+ + C R + +
Sbjct: 143 PSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALAL 202
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
L M P+ ++++H L
Sbjct: 203 LRGMARHGCVPDAVLYQTVIHA-----------------------------------LVA 227
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+EAA +L +M G + +TF+ V L + E ++D + G P T
Sbjct: 228 QGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVT 287
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y L+ L + + E L V + NV N VI + RATE+ M
Sbjct: 288 YGFLLRGLCRTRQADEAYAMLGRVPE----VNVVMLNTVIRGCLAEGKLARATELYEMMG 343
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+ P++ T+N L+ G CK +L + E G P+ T+++++ CR ++
Sbjct: 344 SKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWD 403
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
DA L +M G N+ YN +I +L G + ++RL Q+M++ PDI T+N +I
Sbjct: 404 DARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTII 463
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
C +++++AE F ++L G+ + +Y+ LI AL+ SGR+ E + M +GC
Sbjct: 464 YHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCP 523
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
D + N +++ L ++G + + +++ +GI +F
Sbjct: 524 LDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNF 562
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 120/297 (40%), Gaps = 35/297 (11%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G S +++ YN +I AL K +D A Q+M CKPD TYN +I+ +C
Sbjct: 412 MSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQ 471
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+DEA + + G N TY LI ++ R E R+ M
Sbjct: 472 MDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEM-------------- 517
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++HG PL + N L+ L + +L +M +G
Sbjct: 518 VLHGC--------------------PL-DVVSYNGLIKALCKEGNVDRSMMLLEEMMTKG 556
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P + +++ + L + + + + +G+ P TY L+ L K G
Sbjct: 557 IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAAL 616
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
L + + + ++ +YN++I CKV ++D A+ + + I PN T+ ++
Sbjct: 617 NLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMV 673
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 221/481 (45%), Gaps = 38/481 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P+T Y +I ++LA+ Q+ + + ++ ++ +C +A+
Sbjct: 9 VAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAM 68
Query: 66 RLV-KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE--RNVCPNEATVRSLV 122
+V + LG P+V++YT+L+ G C+ K+ E ++ +M E + PN + +++
Sbjct: 69 NIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVI 128
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
HG F+ + KA+ L ++R + CN+++ L +A +LR+M D+ +
Sbjct: 129 HGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIM 188
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ +T++ V ++ L E IL + G P TY +L++ L K G E
Sbjct: 189 PDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREI 248
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
LN + + R N PN+ T+ L+ G+
Sbjct: 249 LNSMIQSR--GN---------------------------------PNVATYGGLLHGYAT 273
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ + L+ ++++ G +PD FN I + R ++A+ ++M + G+ P+ I+
Sbjct: 274 KGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIIS 333
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y +I LC IG + ++ F +M D +SPDI F LI F K EKAE+ F+ M+
Sbjct: 334 YGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMM 393
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G+RP ++ +I L K G+ EAK F M P+ + N I+ G+ +
Sbjct: 394 DRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLD 453
Query: 483 E 483
E
Sbjct: 454 E 454
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 211/445 (47%), Gaps = 18/445 (4%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQM--EGLGYAPNVYTYTILIDGFCNAKRVAE 98
C PD F+Y +L+ G+C +EA+ L+ M +G PNV +YT +I GF V +
Sbjct: 80 CTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGK 139
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
+ + M +R + P+ T S++ G+ + KA E+L + ++ + N+L++
Sbjct: 140 AYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVH 199
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
++ EA IL++M G P T+ + CL E IL++ I+ P
Sbjct: 200 GYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNP 259
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
+TY L+ G VE + ++ + ++ + + + +N+ I + K +D A
Sbjct: 260 NVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTF 319
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
+MR + + P+++++ T+I G CK + +++ G PD F ++I
Sbjct: 320 NKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMY 379
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
++E A + EM++ G+ P + + +I L G V + LF M + P++ ++
Sbjct: 380 GKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSY 439
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
NA+I + K+++ K ML++GL+P+ +++ L+ + LSM
Sbjct: 440 NAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDM-------------LSM-- 484
Query: 459 NGCNPDSYTSNLILETLVQQGRFEE 483
G PD T N ++++ + GR E+
Sbjct: 485 -GLKPDVATCNTLIDSCCEDGRIED 508
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 205/472 (43%), Gaps = 22/472 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSN----SIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
LG +P Y ++ L ++DL ++ + D C P+ +Y +IHG +
Sbjct: 78 LGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDG--DHCPPNVVSYTTVIHGFFKED 135
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
V +A L +M G P+V T +IDG C + + + VL M ++++ P+ T
Sbjct: 136 EVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYN 195
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
SLVHG +A +L + + + L+ L +EA IL M
Sbjct: 196 SLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQS 255
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
P +T+ + T DL E ++D ++ GV+P + + + A K GR E
Sbjct: 256 RGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEA 315
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
N + + L+ ++ SY +ID CK+ +D A +M D ++P++V F LI G
Sbjct: 316 MLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHG 375
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ K EL +++ G +P F +MID L + + +A M V PN
Sbjct: 376 FSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPN 435
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
++YN +I G + L+L M + + P+ TFN L+
Sbjct: 436 VVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLD---------------- 479
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
ML++GL+PD + + LI + + GR ++ F M D+ T N+I
Sbjct: 480 DMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTENII 531
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 186/455 (40%), Gaps = 69/455 (15%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P TY ILI C +G ++ A + Q+ G N ++T ++ C KR ++
Sbjct: 11 PTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSD---- 66
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LS 161
A ++IR+ + T + T+L + L
Sbjct: 67 -------------------------------AMNIVIRWTPKLGCTPDVFSYTVLLKGLC 95
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
+ EA ++ M + G + YT ++ F K +
Sbjct: 96 DEKKCEEAVDLIHMMAEDGDHCPPNVVSYTT--------------VIHGFFKEDEVGK-- 139
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
Y L E L + + +V + N +ID CKV MD+A E+ R+M
Sbjct: 140 AYTLFCEMLDRG-----------------IPPDVVTCNSIIDGLCKVQAMDKAEEVLRQM 182
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
D+ I P+ T+N+L+ G+ ++ + +L + G P+ T++ +IDCLC+
Sbjct: 183 FDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGH 242
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+A + L+ M++ PN TY L+ GD+ L M + + PD + FN
Sbjct: 243 TEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQ 302
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I ++ + ++++A F M GL PD SY +I L K GR D A F M +G
Sbjct: 303 IYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGL 362
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+PD ++ G++E+A ++ +RGI
Sbjct: 363 SPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGI 397
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 148/350 (42%), Gaps = 38/350 (10%)
Query: 173 LRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK 232
+ + G + P + T+ ++C LN L IK G++ ++ ++ L
Sbjct: 1 MARAGSKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCA 60
Query: 233 AGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM-RDRD-IAPN 289
R + + + K +V SY +++ C + A ++ M D D PN
Sbjct: 61 EKRTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPN 120
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH---------- 339
+V++ T+I G K+ EV K L +L+ G PD T NS+ID LC+
Sbjct: 121 VVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLR 180
Query: 340 -------------------------RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
+ ++A+ L +M G PPN +TY++LI LC G
Sbjct: 181 QMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFG 240
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
+ + M R +P++ T+ L+ + + + M+ G+RPD+ ++
Sbjct: 241 GHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFN 300
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
I A +K GR DEA TF M Q G PD + +++ L + GR + A
Sbjct: 301 IQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAA 350
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 122/471 (25%), Positives = 218/471 (46%), Gaps = 35/471 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P N ++ +KSN + A++ + +M + K T+NI+I+ +C+ G + +A
Sbjct: 151 GVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKA 210
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ME LG PNV TY +I G+C+ RV + ++MK R V P+ T S + G
Sbjct: 211 KEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISG 270
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + EA+ +L KM + G P
Sbjct: 271 MCK-----------------------------------EGKLEEASGMLEKMKEIGLRPT 295
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + +L D ++ G+ P STY +L+ AL+ + E D +
Sbjct: 296 AVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIK 355
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + LV + +YN++I+ +C+ + +A + EM + I P VT+ +LI K
Sbjct: 356 EMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRG 415
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + +L ++ G PD FN++ID C + A L EM + V P+ +T+N
Sbjct: 416 RMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFN 475
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L++ C G V + L ++M++ I PD ++N LI + + ++ A + ML++
Sbjct: 476 TLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSI 535
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G P +Y+ALI+ L K+ D A+Q M G P+ T ++E +
Sbjct: 536 GFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 189/402 (47%), Gaps = 35/402 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGI P+ YN +I ++ A + F M KPD +TY I G+C+ G ++E
Sbjct: 220 LGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEE 279
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++++M+ +G P TY LIDG+CN + F + M + P +T L+H
Sbjct: 280 ASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIH 339
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+F L C EA I+++M ++G +P
Sbjct: 340 ALF------------------------LDCKM-----------DEADGIIKEMSEKGLVP 364
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+S T++ + ++ + + D I +G++P TY L+ L K GR + D
Sbjct: 365 DSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLF 424
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + ++ +N +ID C MDRA + +EM + P+ VTFNTL+ G C++
Sbjct: 425 EKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCRE 484
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V REL+ + G KPD ++N++I + +DA EM+ G P +TY
Sbjct: 485 GKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTY 544
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
N LI+ LC + + +L ++M + I+P+ T+ +LI+
Sbjct: 545 NALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 216/451 (47%), Gaps = 2/451 (0%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
Y++LI C + D+A M+G G P+V+ ++ F + R + + + M
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMA 166
+ + T +++ + + KA E I ME + +V NT+++ +
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEF-IGLMEALGIKPNVVTYNTIIHGYCSRGRV 242
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
A I M RG P+S T+ ++ + L E G+L+ + G++P TY L
Sbjct: 243 EGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTL 302
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ G Y + + ++ L+ V++YNM+I MD A I +EM ++ +
Sbjct: 303 IDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGL 362
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P+ VT+N LI+G+C+ V K L ++ G +P + T+ S+I L + R + A D
Sbjct: 363 VPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADD 422
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
++V G+ P+ I +N LI CA G++ R+ + ++M ++ PD TFN L+Q C
Sbjct: 423 LFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRC 482
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R K+E A + M + G++PD+ SY+ LI K G +A + M G NP
Sbjct: 483 REGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLL 542
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T N +++ L + + A ++K +GI+
Sbjct: 543 TYNALIQGLCKNEEGDHAEQLLKEMISKGIT 573
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 93/196 (47%)
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
V ++ LI C+ E M+ G P N M+ +++R E A +E
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M + + +T+NI+I LC G + ++ M+A I P++ T+N +I +C +
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+E A F M G++PD+++Y + I + K G+ +EA M++ G P + T N
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301
Query: 471 ILETLVQQGRFEEAHD 486
+++ +G E A D
Sbjct: 302 LIDGYCNKGNLEMAFD 317
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 35/171 (20%)
Query: 361 ITYNILIRSLCAI--GDVA---------------------------------RSLRLFQK 385
+ Y++LIR+ C + GD A ++ L+ +
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M RI + TFN +I C+ K++KA++ M LG++P+ +Y+ +I GR
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ A+ F M+ G PDSYT + + ++G+ EEA +++ KE G+
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGL 292
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 42/90 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P YN +I K + A+ +M P TYN LI G+C+ D A
Sbjct: 501 GIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHA 560
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAK 94
+L+K+M G PN TY LI+G N +
Sbjct: 561 EQLLKEMISKGITPNDNTYLSLIEGIGNVE 590
>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 669
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 233/469 (49%), Gaps = 16/469 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I+ + ++P T YN V+ L + + A ++M + C P+ T+ I C+ G+
Sbjct: 201 IASMPVAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGL 260
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM--KERNVCPNEATV 118
+D A++L+++M G P+V Y+ L++GF RV + +L M K VC N A
Sbjct: 261 LDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTMLCKPNTVCYNAA-- 318
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
+ G+ EL+ + ++ + + L L + + A ++ +M
Sbjct: 319 ---LKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQK 375
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P+ ++ + +++ +LD+ + P ++ ++AL + R +
Sbjct: 376 YGCRPDVVIYNTLINYFSEQGRVDDALMLLDSML---CNPDTISFNAALKALCRTERWYD 432
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + ++ ++N++ID C+ +++ A E+ +M P++VT+++LI+
Sbjct: 433 VEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLIN 492
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G + V EL + C KPD F++N+++ LCRA R+EDA + ++ M PP
Sbjct: 493 GFSEQGLVESAIELF-QSMPC--KPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPP 549
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N IT+NILI SLC G R++ +F++M +PDI+T+NALI F ++ + A
Sbjct: 550 NEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRL---DDAL 606
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ T+ +PD SY++ +K L ++ R+ EA++ M + C P+ T
Sbjct: 607 NLLSTMSCKPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVT 655
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 225/452 (49%), Gaps = 13/452 (2%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D ++N L+ G CR G + +A R+++ + G A NV TYT LI+G+C + R+A+ ++
Sbjct: 143 DAVSHNTLVAGYCRDGRLADAERVLEAAKVSGAA-NVVTYTALINGYCRSGRLADALNLI 201
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
M V P+ T +++ G+ KA EL+ + ++ T + N
Sbjct: 202 ASMP---VAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQN 258
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
+ A +L +M G P+ + V +++ +L+T + KP Y
Sbjct: 259 GLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTML---CKPNTVCY 315
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
++ L A R + + + + N +++M+ C C+ ++D A E+ +M+
Sbjct: 316 NAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQK 375
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
P++V +NTLI+ + V LL +L PD +FN+ + LCR R+ D
Sbjct: 376 YGCRPDVVIYNTLINYFSEQGRVDDALMLLDSML---CNPDTISFNAALKALCRTERWYD 432
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
+ +++M+ P +T+NILI SLC G V ++ +F++M R +PDI T+++LI
Sbjct: 433 VEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLIN 492
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
F +E A + F SM +PD FSY+A++K L ++ R+++A + +M + C P
Sbjct: 493 GFSEQGLVESAIELFQSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPP 549
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ T N+++ +L Q+G + A ++ K E G
Sbjct: 550 NEITFNILINSLCQKGFADRAIEVFKQMPEYG 581
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 172/360 (47%), Gaps = 17/360 (4%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+T YNA + L + +M C P+ T+++L +C+ G+VD A+ +
Sbjct: 310 PNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEV 369
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVHGVF 126
V+QM+ G P+V Y LI+ F RV + +L+ M +C P+ + + + +
Sbjct: 370 VEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSM----LCNPDTISFNAALKALC 425
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
R + EL+ + + + ++ N L+ L + + + A + +M P+
Sbjct: 426 RTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIV 485
Query: 187 TFDYTVTCLVTGLD---LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ + L+ G L E+ ++ F KP +Y +++ L +A R + +
Sbjct: 486 TY----SSLINGFSEQGLVES--AIELFQSMPCKPDIFSYNAVLKGLCRAARWEDAGELI 539
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
++ + N ++N++I+ C+ DRA E+ ++M + P++ T+N LI+G +
Sbjct: 540 ANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQ 599
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ LL + KPD ++NS + LCRA R+++A + ++EM+ PPN +T+
Sbjct: 600 GRLDDALNLLSTM---SCKPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTF 656
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 32/144 (22%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YNAV+ L ++ + A M+ C P+ T+NILI+ +C+ G D A+ +
Sbjct: 514 PDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEV 573
Query: 68 VKQMEGLGYAPNVYTYTILIDGF--------------------------------CNAKR 95
KQM G P+++TY LI+GF C A+R
Sbjct: 574 FKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTMSCKPDAISYNSTLKGLCRAER 633
Query: 96 VAEVFRVLEIMKERNVCPNEATVR 119
E ++ M + PNE T +
Sbjct: 634 WKEAEEIVAEMLRKKCPPNEVTFK 657
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 206/459 (44%), Gaps = 38/459 (8%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
PD YN ++ G C G +D A RLV M P+ YTY LI G C R + V
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAV 188
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
LE M R P+ T L+ C Y+
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEAT---------------------------CKRSGYK--- 218
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+A +L +M D+G P+ T++ + + + + L G +P +
Sbjct: 219 -----QAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVS 273
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y ++++ L+ A R + ++ + + NV ++NM+I C+ +++ A E+ +M
Sbjct: 274 YNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMP 333
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
PN +++N L+ CK ++HK E + +++ G PD ++N+++ LCR +
Sbjct: 334 QYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVD 393
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
A++ L ++ + G P I+YN +I L G +L L +M + + PDI T++ +
Sbjct: 394 VAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIA 453
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
CR ++IE+A + F + +G+RP Y+A++ L K A F M +GC
Sbjct: 454 SGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCM 513
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
P+ T +++E L +G +EA ++ RG+ K
Sbjct: 514 PNESTYTILVEGLAYEGLVKEARELFAQLCSRGVVNKKL 552
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 195/434 (44%), Gaps = 3/434 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
P +YNA++ + +D A M V+ PD +TYN LI G+C G AL
Sbjct: 131 GPDVMVYNAMVAGYCGAGQLDAARRLVADMPVE---PDAYTYNTLIRGLCGRGRTSNALA 187
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+++ M G P+V TYTIL++ C + ++L+ M ++ P+ T +++G+
Sbjct: 188 VLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGIC 247
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A E L + N +L L +A ++ +M +G P
Sbjct: 248 QEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVV 307
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
TF+ ++ L + +L+ + G P +Y L+ A K + + ++ +
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELM 367
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
++ SYN ++ C+ +D A E+ +++D+ +P L+++NT+I G K +
Sbjct: 368 VSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKT 427
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ ELL + G +PD T++++ LCR R E+A+ ++ + G+ P YN +
Sbjct: 428 KEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAI 487
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ LC + ++ LF M + P+ T+ L++ +++A + F + + G+
Sbjct: 488 LLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547
Query: 427 RPDNFSYSALIKAL 440
IK L
Sbjct: 548 VNKKLMKKGSIKML 561
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 174/387 (44%), Gaps = 2/387 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ + + P YN +I L A + M C PD TY IL+ C+
Sbjct: 157 VADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSG 216
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+A++L+ +M G AP++ TY ++++G C RV + L+ + PN +
Sbjct: 217 YKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNI 276
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+F A +L+ + + N L+ L + A +L +M G
Sbjct: 277 VLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYG 336
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P S +++ + +++ ++ + RG P +Y L+ AL + G +V+
Sbjct: 337 CTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNG-EVDVA 395
Query: 241 RYLNHVFKDRLVSNV-NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L H KD+ S V SYN VID K A E+ EM + + P+++T++T+ SG
Sbjct: 396 IELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASG 455
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
C++ + + + + G +P +N+++ LC+ +A+D + M+ G PN
Sbjct: 456 LCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPN 515
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKM 386
TY IL+ L G V + LF ++
Sbjct: 516 ESTYTILVEGLAYEGLVKEARELFAQL 542
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 220/467 (47%), Gaps = 35/467 (7%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
T YN +++ L KS D Y + M C P+ +TY L+ +C+ +EA +
Sbjct: 16 GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
+ M G +PNV++Y+ILI G C ++V E +L M + PN T SL+ G+ +
Sbjct: 76 RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+A +L R + R +V N L+ S EA + +M ++G +P T+
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ +L F ++G R +++L+K + +
Sbjct: 196 N----------------SLLSGFSRKGEFGR-------VQSLFK------------DMLR 220
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
V N+ ++N ++D FCK+ M A + EMR P++V++NTLI G C + H+
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHE 280
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+ LL ++ G PD ++N +ID ++ + A+ E+ + G+ P+ +Y+ +I
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
LC G V + +F+ M A+ +PD L+ CR ++ ++ + F +M+ P
Sbjct: 341 CLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVP 400
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
Y+ L+ L K+ R D+ + F + + G +PD S +ILETL
Sbjct: 401 LIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 190/452 (42%), Gaps = 35/452 (7%)
Query: 46 FTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEI 105
+YN L+ + + G D M G PN YTY L+ C A+R E V
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 106 MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSM 165
M + PN + L+ G+ R QK+
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCR--------------------GQKV-------------- 103
Query: 166 ASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLL 225
EAA +L +M D G+ P T+ ++ L L E + + RG P Y +
Sbjct: 104 -DEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162
Query: 226 LMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
L++ K G E R + + + V +YN ++ F + R + ++M +
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
PN+ TFN L+ G CK ++ + L + + G PD ++N++I +C + +A
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQ 282
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
L EM+ GV P+ ++YNILI G + +++LF ++ + PD ++++ +I
Sbjct: 283 RLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCL 342
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
CR K+ A F M+ G PD L+ L + R E+ + F +M + C P
Sbjct: 343 CRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLI 402
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
NL++ L + R ++ +I ERG S
Sbjct: 403 PEYNLLMYKLCKAKRSDDVCEIFHELTERGFS 434
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 182/411 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+T Y ++ +L ++ + A F+ M+ C P+ F+Y+ILI G+CR VDEA
Sbjct: 47 GCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEA 106
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M G+ PNV TY L+ G C ++ E + M R P+ L+ G
Sbjct: 107 AELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDG 166
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D +A+ L +E+ + N+LL S ++ + M +G +P
Sbjct: 167 FSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPN 226
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + D+ E + G P +Y L+ + G+ E R L
Sbjct: 227 IFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLR 286
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + ++ SYN++ID + K +D A ++ E+ + P+ +++T+I C+
Sbjct: 287 EMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAG 346
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V + ++ G PD ++ LCR R ++ + MV++ P YN
Sbjct: 347 KVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYN 406
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+L+ LC +F ++ SPD+ ++++ R + + AE
Sbjct: 407 LLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAAE 457
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 149/315 (47%)
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+++Y + L + G + + G P TY L+ +L +A R E +
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
NV SY+++I C+ +D A E+ EM D PN+VT+ +L+SG CK ++
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ +L ++ G PD +N +ID + +A EM+E G P TYN L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ G+ R LF+ M P+I+TFN L+ FC+M + +A + F M +LG
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
PD SY+ LI+ + G+ EA++ M ++G PD + N++++ + G + A
Sbjct: 259 PPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318
Query: 487 IVKTSKERGISFKSF 501
+ + G+ +F
Sbjct: 319 LFYEIPKSGLEPDAF 333
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 130/307 (42%), Gaps = 6/307 (1%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
+ G P +YN +ID K + AY F++M C P FTYN L+ G R G
Sbjct: 150 YRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFG 209
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
L K M G PN++T+ L+DGFC + E R+ M+ P+ + +L+
Sbjct: 210 RVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLI 269
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
G+ PH+A + L+R M R + +V N L+ S + A + ++ G
Sbjct: 270 RGMCSKGKPHEA-QRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGL 328
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P++ ++ + CL + + I G P + + L+ L + R E
Sbjct: 329 EPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCE 388
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL----VTFNTLI 297
+ K V + YN+++ CK D EI E+ +R +P++ V TL
Sbjct: 389 LFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLR 448
Query: 298 SGHCKDA 304
KDA
Sbjct: 449 RSDDKDA 455
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 126/517 (24%), Positives = 232/517 (44%), Gaps = 29/517 (5%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ R Y ++ AL +S A F +M C+P+ TY ++I+ +C+ ++E R+
Sbjct: 72 PTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRI 131
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M G P+V TY LIDG+C V +L++M + PNE T L+ G R
Sbjct: 132 LDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCR 191
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ H+A LL + +E + N+L++ A +L M + G +P+ T
Sbjct: 192 KKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWT 251
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + L + E + ++ ++G+K Y L++ KAG+ + + L+ +
Sbjct: 252 YSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRML 311
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ + N ++YN +ID CK + A + M + + + T+ LI K+ +
Sbjct: 312 TEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFD 371
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+L ++ G++PD + + + I C ++A D +S M E GV P+ +TY ++I
Sbjct: 372 YAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVI 431
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ--------------SFC------- 406
+ +G + + + ++M P +T++ LI+ + C
Sbjct: 432 DAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVF 491
Query: 407 --------RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+M K E A + F ML G P+ +Y+ LI L K GR A++ F M +
Sbjct: 492 FADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNE 551
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G +P N +L + G + +A +V E G
Sbjct: 552 RGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHG 588
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/456 (25%), Positives = 211/456 (46%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYT 82
+N ++ A+ F M C+ + +Y LIHG+C +G VDE + + K+M P V T
Sbjct: 17 NNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRT 76
Query: 83 YTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFM 142
YT+++ + R E + M+ER PN T +++ + + + +L +
Sbjct: 77 YTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV 136
Query: 143 EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
E+ + N L+ M A IL M P T++ + +++
Sbjct: 137 EKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVH 196
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
+L ++ + P TY L+ K G R LN + ++ +V + +Y++ I
Sbjct: 197 RAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFI 256
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
D CK ++ A + ++++ I N V + LI G+CK ++ LL +L
Sbjct: 257 DTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCL 316
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P+ T+N++ID LC+ + ++AL + M++ G+ TY ILI ++ GD + R+
Sbjct: 317 PNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRI 376
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
+M + PD+Y + A I +FC I++AE M G+ PD +Y+ +I A
Sbjct: 377 LDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGG 436
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
G + A M GC+P +T + +++ L+++
Sbjct: 437 LGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKE 472
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 222/489 (45%), Gaps = 6/489 (1%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ R YN +I + ++ A +M + P TYN LIHG C+IG +D A R
Sbjct: 176 NPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYR 235
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L+ M G P+ +TY++ ID C R+ E + +KE+ + NE +L+ G
Sbjct: 236 LLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYC 295
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A LL R + + L N L+ L EA ++ M +G
Sbjct: 296 KAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVP 355
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + ++ D + ILD + G +P Y + A G E + ++ +
Sbjct: 356 TYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMM 415
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
F+ ++ + +Y +VID + + +++ A ++ + M D P+ T++ LI K+
Sbjct: 416 FERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELT 475
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
K + + + C P+ F F + D + + +FE AL+ +M+E G PN TY L
Sbjct: 476 KKYKNVAL----CDSIPNVF-FADVAD-VWKMMKFETALELFEKMLEHGCSPNINTYAKL 529
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I LC +G + + +LF M +SP +N+L+ C + A + +M+ G
Sbjct: 530 IIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGH 589
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P S + L L + G ++AK F ++ Q G N D ++++ L++ G + +
Sbjct: 590 LPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSE 649
Query: 487 IVKTSKERG 495
++ + RG
Sbjct: 650 LLGVMEARG 658
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 130/516 (25%), Positives = 221/516 (42%), Gaps = 33/516 (6%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y +I L + +D F++M D C P TY +++H + G EA+ L +M
Sbjct: 42 YTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMR 101
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G PN++TYT++I+ C ++ E R+L+ M E+ + P+ T +L+ G +
Sbjct: 102 ERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVE 161
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A E+L + N L+ A A+L KM + P T++ +
Sbjct: 162 AAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLI 221
Query: 193 --TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
C + LD +L+ + GV P TY + ++ L K GR E + N + +
Sbjct: 222 HGQCKIGYLD--SAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKG 279
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+ +N Y +ID +CK MD A + M D PN T+N LI G CK+ +V +
Sbjct: 280 IKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEAL 339
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
L+ +++ G K T+ +I + + F+ A L +MV G P+ Y I +
Sbjct: 340 LLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAF 399
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C G++ + + M + PD T+ +I ++ + + A M G P +
Sbjct: 400 CTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSH 459
Query: 431 FSYSALIKALIKSG-----------------------------RFDEAKQTFLSMEQNGC 461
+YS LIK L+K +F+ A + F M ++GC
Sbjct: 460 HTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGC 519
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+P+ T ++ L + GR A + ERG+S
Sbjct: 520 SPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVS 555
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 122/240 (50%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
SY +I C+V +D I ++MR+ D P + T+ ++ + + L +
Sbjct: 41 SYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEM 100
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
E G +P+ T+ MI+ +C+ + E+ L EMVE G+ P+ TYN LI C G V
Sbjct: 101 RERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMV 160
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+ + M ++ +P+ T+N LI FCR + +A ML L P +Y++L
Sbjct: 161 EAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSL 220
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
I K G D A + M +NG PD +T ++ ++TL ++GR EEA+ + + KE+GI
Sbjct: 221 IHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGI 280
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 229/484 (47%), Gaps = 29/484 (5%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N ++ L K + ++QM + PD T NILI+ +C + ++E L + +
Sbjct: 94 FNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIM 153
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
GY P+V T+T LI G C R+ E ++ M++ PN T +L+ G+ + +
Sbjct: 154 RRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNIN 213
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A + Q+++ +T Y + P ++ +
Sbjct: 214 IALKW----------HQEMLNDTSPYVFNCR-------------------PNVISYSIII 244
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L + E + + + +GV+P T+ +L++ L K G+ ++ + L + + +V
Sbjct: 245 DGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIV 304
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
N+ +Y +I FC V ++ A E+ M + P+++++N LI+G+CK +V + +L
Sbjct: 305 PNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKL 364
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+L G PD T ++ L A + +DA + + + +P + I + LC
Sbjct: 365 FNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCK 424
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G + +++LF ++++ + DI TF LI C+ K+E A + F + G++PD +
Sbjct: 425 NGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMA 484
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
YS++I K G+ D+A F ME+NGC+PD T ++++ + + E+ ++
Sbjct: 485 YSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMI 544
Query: 493 ERGI 496
E+ +
Sbjct: 545 EKDV 548
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 130/281 (46%), Gaps = 41/281 (14%)
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
H F D ++ ++ S+N ++ K+ + + ++M + P+L+T N LI+ C
Sbjct: 81 HQFFDLMMRSIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVN 140
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+++ + ++ G+ PD TF ++I LC HR +A M + G PN +TY
Sbjct: 141 RINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYG 200
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADR---------------------------------- 390
LI+ LCA+G++ +L+ Q+M D
Sbjct: 201 TLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLF 260
Query: 391 -------ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+ P++ TF+ LI C+ ++ KA+K M+ +G+ P+ F+Y++LIK
Sbjct: 261 NEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLV 320
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G + AK+ F+SM G PD + N+++ + + EEA
Sbjct: 321 GDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEA 361
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 114/267 (42%), Gaps = 6/267 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI P+ Y ++I ++ A F M +PD +YN+LI+G C+ V+E
Sbjct: 301 IGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEE 360
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A++L +M +G P+V T +L+ A +V + + ++K + + +
Sbjct: 361 AMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLD 420
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNT---LLYRLSNNSMASEAAAILRKMGDRG 180
G+ C + + FE + F E E KL T L+ L A + K+ + G
Sbjct: 421 GL--CKNGY-IFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEG 477
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P++ + + +++ + + G P TY +LM Y++ + +
Sbjct: 478 IQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVV 537
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCK 267
+ L+ + + + + Y +V D CK
Sbjct: 538 QLLHRMIEKDVWPDDGIYAIVEDMVCK 564
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 222/472 (47%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN +I L++S A +++M ++ KP T++ L+ + + L+++ME
Sbjct: 197 YNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEME 256
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
LG PN+YTYTI I A R+ E R+++ M++ P+ T L+ +
Sbjct: 257 SLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLD 316
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A EL ++ ++ T+L + S+ +M GY P+ TF V
Sbjct: 317 DAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILV 376
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L +++E +LD K+GV P TY L+ L + R + N++ +V
Sbjct: 377 NALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVV 436
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+Y + ID + K D+A E +M+ R IAPN+V N + + + + + +
Sbjct: 437 PTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVI 496
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L G PD T+N M+ C +A + ++A++ LS+M E P+ I N LI +L
Sbjct: 497 FNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYK 556
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G V + ++F +++ +++P + T+N LI + ++++A + F SM G P+ +
Sbjct: 557 AGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTIT 616
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
++ ++ L K+ D A + M C PD T N I+ LV + R +A
Sbjct: 617 FNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDA 668
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 230/486 (47%), Gaps = 3/486 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS + ++A++ A K + ++M KP+ +TY I I + R G +DEA
Sbjct: 224 GLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEA 283
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++K+ME G P+V TYT+LID C A ++ + + MK + P+ T +++
Sbjct: 284 CRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDK 343
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLP 183
C D + E ME + ++ T+L L EA +L M +G LP
Sbjct: 344 FSDCGDLGRVKEFWSE-MEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLP 402
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ ++ L+ L++ + + GV P TY+L ++ K+GR +
Sbjct: 403 NLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETF 462
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + N+ + N + ++ + A I ++ +AP+ VT+N ++ + K
Sbjct: 463 EKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKA 522
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V + ELL + E +PD NS+I+ L +A R ++A + + + P +TY
Sbjct: 523 GQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTY 582
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI L G V R++ LF M + P+ TFN ++ C+ ++++ A K + M T
Sbjct: 583 NTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTT 642
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+ PD +++ +I L+ R +A F M++ PD T +L +V+ G E+
Sbjct: 643 MNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVKNGLMED 701
Query: 484 AHDIVK 489
A I +
Sbjct: 702 AFKIAE 707
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/517 (25%), Positives = 226/517 (43%), Gaps = 44/517 (8%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P + N++I+ L K+ +D A+ F ++ + P TYN LI G+ + G V A+ L
Sbjct: 542 PDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMEL 601
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF- 126
M G G PN T+ ++D C V ++L M N P+ T +++HG+
Sbjct: 602 FASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVI 661
Query: 127 --RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAI----LRKMG--- 177
R D F + + + + +T +C TLL + N + +A I + ++G
Sbjct: 662 EKRVSDAIWLFHQMKKMLTPDCVT---LC-TLLPGVVKNGLMEDAFKIAEDFVHRLGVYV 717
Query: 178 DR--------GYLPESST-----FDYTVTCLVTGLDLNETCGILDTFIKR---------- 214
DR G L ++ T F + C D + I+ K
Sbjct: 718 DRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVF 777
Query: 215 -------GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
GVKP +Y L+E D + +V +YN+++D K
Sbjct: 778 IRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGK 837
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
++ E+ +M PN +T N +I+ K + K +L L+ F P T
Sbjct: 838 SGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCT 897
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+ ++D L ++ R E+A + EMV++G PN YNILI GDV + LF++M
Sbjct: 898 YGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMV 957
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ I PD+ ++ +L+ C +++ A F + GL D+ +Y+ +I L +S R +
Sbjct: 958 REGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIE 1017
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
EA + M+ G NPD +T N ++ L G E+A
Sbjct: 1018 EALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQA 1054
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 204/450 (45%), Gaps = 40/450 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ Y I L ++ ID A ++M D C PD TY +LI +C G +D+
Sbjct: 258 LGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDD 317
Query: 64 ALRLV-----------------------------------KQMEGLGYAPNVYTYTILID 88
A+ L +ME GYAP+V T+TIL++
Sbjct: 318 AMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVN 377
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELL--IRFMEREP 146
C A + E F +L++M+++ V PN T +L+ G+ R A +L + + P
Sbjct: 378 ALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVP 437
Query: 147 LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
+ Y S S +A KM RG P + ++ L L E
Sbjct: 438 TAYTYILFIDFYGKSGRS--DKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKV 495
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
I + G+ P TY ++M+ KAG+ E L+ + +++ ++ N +I+
Sbjct: 496 IFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLY 555
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K +D A ++ ++D +AP +VT+NTLI+G K+ +V + EL + G P+
Sbjct: 556 KAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTI 615
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
TFN+++DCLC+ + AL L +M P+ +T+N +I L V+ ++ LF +M
Sbjct: 616 TFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM 675
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEK 416
+ ++PD T L+ + +E A K
Sbjct: 676 K-KMLTPDCVTLCTLLPGVVKNGLMEDAFK 704
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 229/504 (45%), Gaps = 46/504 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+T +N ++D L K++ +DLA +M+ C PD T+N +IHG+ V +A
Sbjct: 609 GCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDA 668
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE-------------------- 104
+ L QM+ + P+ T L+ G + + F++ E
Sbjct: 669 IWLFHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMG 727
Query: 105 ------------IMKERNVCPNEATVRSLVHGVFRCLDPHK----AFELLIRFMEREPLT 148
+ +R VC S++ + + L HK A + IRF + +
Sbjct: 728 GILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVK 787
Query: 149 QKLVCNTLLYR----LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNET 204
L L + N+ MA + +M + G P+ T++ + +NE
Sbjct: 788 PTLESYNFLIEGFLGVHNDEMAWN---LFTEMKNAGCAPDVFTYNLLLDAHGKSGKINEL 844
Query: 205 CGILDTFIKRGVKPRFSTYLLLMEALYKAGR-DVEGDRYLNHVFKDRLVSNVNSYNMVID 263
+ + I KP T+ +++ L K+ D D + + V D +Y ++D
Sbjct: 845 FELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGD-FSPTPCTYGPLLD 903
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
K ++ A E+ EM D PN +N LI+G K +V+ EL ++ G +P
Sbjct: 904 GLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRP 963
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D ++ S++ CLC A R +DAL ++ + G+ ++I YN++I L + +L L+
Sbjct: 964 DLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLY 1023
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+MQ+ I+PD++T+N+LI + +E+A K + + +GL P+ F+Y+ALI+ S
Sbjct: 1024 DEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMS 1083
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYT 467
G D A + M GC+P++ T
Sbjct: 1084 GNSDSAYAVYKRMMVGGCSPNTGT 1107
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 129/505 (25%), Positives = 227/505 (44%), Gaps = 17/505 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P + YN ++ K+ +D A MS +QC+PD N LI+ + + G VDEA
Sbjct: 504 GLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEA 563
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +++ + AP V TY LI G +V + M PN T +++
Sbjct: 564 WKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDC 623
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + A ++L + + L NT+++ L S+A + +M + P+
Sbjct: 624 LCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM-KKMLTPD 682
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKR-GVKPRFSTYLLLMEA-LYKAGRD---VEG 239
T + +V + + I + F+ R GV + LM L +AG + + G
Sbjct: 683 CVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFG 742
Query: 240 DRYL-NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI-CREMRDRDIAPNLVTFNTLI 297
DR + V KD V +I CK A + R ++ + P L ++N LI
Sbjct: 743 DRLVCGRVCKDGSV-----LMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLI 797
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G L + G PD FT+N ++D ++ + + + +M+
Sbjct: 798 EGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCK 857
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
PNTIT+NI+I +L + ++L LF + + SP T+ L+ + ++E+A++
Sbjct: 858 PNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKEL 917
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD--SYTSNLILETL 475
F M+ G RP+N Y+ LI K+G + A + F M + G PD SYTS ++ L
Sbjct: 918 FEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTS--LVGCL 975
Query: 476 VQQGRFEEAHDIVKTSKERGISFKS 500
+ GR ++A + K+ G+ S
Sbjct: 976 CEAGRVDDALHYFEKLKQTGLYLDS 1000
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 163/340 (47%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
N L++ L + + EA + R+M G P TF + D +L+
Sbjct: 198 NGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMES 257
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G+KP TY + + L +AGR E R + + D +V +Y ++ID C +D
Sbjct: 258 LGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDD 317
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A E+ +M+ P+ VT+ T++ ++ + +E + G+ PD TF +++
Sbjct: 318 AMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVN 377
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
LC+A ++A L M + GV PN TYN LI L + + +L LF M+ + P
Sbjct: 378 ALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVP 437
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
YT+ I + + + +KA + F M G+ P+ + +A + +L + GR EAK F
Sbjct: 438 TAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIF 497
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
++ NG PDS T N++++ + G+ +EA +++ E
Sbjct: 498 NRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSE 537
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 191/452 (42%), Gaps = 70/452 (15%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F +M + ++YN LIH + + G+ EAL + ++M G P++ T++ L+
Sbjct: 182 FGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGK 241
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
+ V +LE M+ + PN T + + IR + R
Sbjct: 242 RRDTETVKSLLEEMESLGLKPNIYT-----------------YTICIRVLGRA------- 277
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
EA I+++M D G P+ T+ + L T L++ +
Sbjct: 278 -----------GRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMK 326
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
KP TY+ +++ G + + + D +V ++ ++++ CK +D
Sbjct: 327 ASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNID 386
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + MR + + PNL T+NTLISG
Sbjct: 387 EAFHLLDVMRKQGVLPNLHTYNTLISG--------------------------------- 413
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
L R +R +DALD + M GV P TY + I G ++L F+KM+ I+
Sbjct: 414 --LLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIA 471
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
P+I NA + S M ++ +A+ F + + GL PD+ +Y+ ++K K+G+ DEA +
Sbjct: 472 PNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIEL 531
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
M +N C PD N ++ TL + GR +EA
Sbjct: 532 LSDMSENQCEPDIIVINSLINTLYKAGRVDEA 563
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 152/324 (46%), Gaps = 2/324 (0%)
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
KM + G+ + +++ + L+ E + + G+KP T+ LM A K
Sbjct: 184 KMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKR- 242
Query: 235 RDVEGDRYLNHVFKD-RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
RD E + L + L N+ +Y + I + +D A I + M D P++VT+
Sbjct: 243 RDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTY 302
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
LI C ++ EL V + KPD+ T+ +M+D + SEM
Sbjct: 303 TVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEA 362
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
G P+ IT+ IL+ +LC G++ + L M+ + P+++T+N LI R+N+++
Sbjct: 363 DGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDD 422
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A F +M TLG+ P ++Y I KSGR D+A +TF M+ G P+ N L
Sbjct: 423 ALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLY 482
Query: 474 TLVQQGRFEEAHDIVKTSKERGIS 497
+L + GR EA I K G++
Sbjct: 483 SLAEMGRLREAKVIFNRLKSNGLA 506
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 134/281 (47%)
Query: 216 VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT 275
+K +TYL++ + L+ G + + + N SYN +I + + A
Sbjct: 155 IKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREAL 214
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
E+ R M + P+L TF+ L+ K + + LL + G KP+ +T+ I L
Sbjct: 215 EMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVL 274
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
RA R ++A + M + G P+ +TY +LI +LC G + ++ LF KM+A PD
Sbjct: 275 GRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDR 334
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
T+ ++ F + + ++ + M G PD +++ L+ AL K+G DEA
Sbjct: 335 VTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDV 394
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M + G P+ +T N ++ L++ R ++A D+ + G+
Sbjct: 395 MRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGV 435
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 104/466 (22%), Positives = 183/466 (39%), Gaps = 38/466 (8%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P +N +I LV + A F QM PD T L+ G+ + G++++A ++
Sbjct: 647 PDVLTFNTIIHGLVIEKRVSDAIWLFHQMK-KMLTPDCVTLCTLLPGVVKNGLMEDAFKI 705
Query: 68 VKQ-MEGLGYAPNVYTYTILIDG-----------------------------------FC 91
+ + LG + + L+ G C
Sbjct: 706 AEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLC 765
Query: 92 NAKRVAEVFRV-LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQK 150
K+ V + KE V P + L+ G + A+ L
Sbjct: 766 KHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDV 825
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
N LL + +E + +M P + T + + LV L++ +
Sbjct: 826 FTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYD 885
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
+ P TY L++ L K+GR E + N YN++I+ F K
Sbjct: 886 LVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGD 945
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
++ A E+ + M I P+L ++ +L+ C+ V L + G D +N
Sbjct: 946 VNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNL 1005
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
MID L R+HR E+AL EM G+ P+ TYN LI +L G V ++ +L++++Q
Sbjct: 1006 MIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIG 1065
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+ P+++T+NALI+ + + A + M+ G P+ +++ L
Sbjct: 1066 LEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 153/360 (42%), Gaps = 35/360 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ YN +I+ + ++ ++A+ F +M C PD FTYN+L+ + G ++E
Sbjct: 784 LGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINE 843
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L +QM PN T+ I+I + + + + + + P T L+
Sbjct: 844 LFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLD 903
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + + EA + +M D G P
Sbjct: 904 GLLK-----------------------------------SGRLEEAKELFEEMVDYGCRP 928
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ ++ + D+N C + ++ G++P +Y L+ L +AGR + Y
Sbjct: 929 NNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYF 988
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + L + +YN++ID + + ++ A + EM+ R I P+L T+N+LI
Sbjct: 989 EKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVA 1048
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V + +L L G +P+ FT+N++I + + A M+ G PNT T+
Sbjct: 1049 GMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTF 1108
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P YN++I L + ++ A ++++ +P+ FTYN LI G G D A
Sbjct: 1030 GINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSA 1089
Query: 65 LRLVKQMEGLGYAPNVYTYTIL 86
+ K+M G +PN T+ L
Sbjct: 1090 YAVYKRMMVGGCSPNTGTFAQL 1111
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 231/492 (46%), Gaps = 38/492 (7%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N ++ +LVK +QM V + + T +ILI+ C +G + + L+ ++
Sbjct: 13 FNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKIL 72
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
LGY PN T+T L+ G C V ++ + + + N+ + +L++G+ + +
Sbjct: 73 KLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETR 132
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A +LL +R ++ + ++ L + + +EA + +M R P T++ +
Sbjct: 133 CAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLI 192
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L +L I + + P T+ +L++AL K G++
Sbjct: 193 CAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKN---------------- 236
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
A +I M + PN+ ++N +I+G CK V + L
Sbjct: 237 ---------------------AKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNL 275
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L +L PD T+NS+ID LC++ R AL+ ++EM G P + +TY L+ +LC
Sbjct: 276 LREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCK 335
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
++ ++ LF KM+ I P +YT+ ALI C+ +++ A++ F +L G D ++
Sbjct: 336 NQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWT 395
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y+ +I L K G FDEA ME NGC P++ T +I+ +L ++ ++A ++
Sbjct: 396 YTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMI 455
Query: 493 ERG-ISFKSFPG 503
+G + F++F G
Sbjct: 456 AKGLLGFRNFHG 467
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 142/306 (46%), Gaps = 2/306 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ +Y+A+ID L K ++ AY + +M + P+ TYN LI C G + A L
Sbjct: 148 PNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSL 207
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M P+VYT++ILID C + A+ ++ M + V PN + +++G+ +
Sbjct: 208 LHEMILKNINPDVYTFSILIDALCKEGKNAK--QIFHAMVQMGVNPNVYSYNIMINGLCK 265
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
C +A LL + + + + N+L+ L + + A ++ +M RG + T
Sbjct: 266 CKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVT 325
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + L +L++ + +RG++P TY L++ L K GR H+
Sbjct: 326 YTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL 385
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+V +Y ++I CK M D A I +M D PN VTF +I + E
Sbjct: 386 VKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDEND 445
Query: 308 KTRELL 313
K +LL
Sbjct: 446 KAEKLL 451
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G++P+ YN +I+ L K +D A ++M PD TYN LI G+C+ G +
Sbjct: 247 MGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITS 306
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L+ +M G +V TYT L+D C + + + + MKER + P T +L+
Sbjct: 307 ALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALID 366
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + A EL + + ++ L M EA AI KM D G +P
Sbjct: 367 GLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIP 426
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
+ TF+ + L + ++ +L I +G+
Sbjct: 427 NAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 115/248 (46%), Gaps = 2/248 (0%)
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
R S + +N ++ K+ + ++M + I NLVT + LI+ C ++ +
Sbjct: 5 RHTSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFS 64
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
LL +L+ G+ P+ T+ +++ LC + L ++V N ++Y L+
Sbjct: 65 FSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNG 124
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
LC G+ +++L + ++ P++ ++A+I C+ + +A + M + P+
Sbjct: 125 LCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPN 184
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y+ LI A +G+ A M NPD YT +++++ L ++G+ A I
Sbjct: 185 VITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFH 242
Query: 490 TSKERGIS 497
+ G++
Sbjct: 243 AMVQMGVN 250
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/507 (25%), Positives = 232/507 (45%), Gaps = 9/507 (1%)
Query: 2 SFLGISPSTR---LYNAVIDALVKSNSIDLAYLKFQQMSVD---QCKPDRFTYNILIHGI 55
S L PS R YN V+ AL + D A + MS++ C+P+ +Y +L+ +
Sbjct: 66 SLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRAL 125
Query: 56 CRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNE 115
C + D+A+ L++ M G +V TY LI G C+A V + ++ M E + PN
Sbjct: 126 CADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNV 185
Query: 116 ATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
SL+ G + ++ + E+ ++ L+ L A +A ++
Sbjct: 186 VVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDM 245
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
M RG P T++ + C+ + E G+L ++GV P TY L++ L
Sbjct: 246 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLE 305
Query: 236 DVEGDRYLNHVFKDRLV--SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
E L + + + + NV ++N VI C + M +A ++ M + NLVT+
Sbjct: 306 MDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTY 365
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
N LI G + +V K EL+ + G +PD FT++ +I C+ + + A D LS M +
Sbjct: 366 NLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRD 425
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
G+ P Y L+ ++C G + R+ LF +M + D+ ++ +I C+ ++
Sbjct: 426 RGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKT 484
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A++ S++ GL PD +YS +I KSG + A M +G PD + +++
Sbjct: 485 AKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQ 544
Query: 474 TLVQQGRFEEAHDIVKTSKERGISFKS 500
+G + ++++ + I+ S
Sbjct: 545 GYSTKGEINKVLELIREMITKNIALDS 571
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 202/454 (44%), Gaps = 41/454 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ +Y++++ KS + F +MS +PD Y LI +C++G +A
Sbjct: 180 GIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKA 239
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ M G PNV TY +LI+ C V E VL+ M E+ V P+ T +L+ G
Sbjct: 240 HGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKG 299
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC--NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ L+ +A LL + + + + V N+++ L + +A + M + G +
Sbjct: 300 LSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCM 359
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
T++ + L+ + + ++D G++P TY +L++
Sbjct: 360 VNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKG------------- 406
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
FCK+ +DRA ++ MRDR I P L + L+ C+
Sbjct: 407 ----------------------FCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCE 444
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + R L ++ F D +++MI C+A + A + L +V+ G+ P+ +T
Sbjct: 445 QGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVT 503
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y+I+I GD+ + + ++M A PD+ F++LIQ + +I K + M+
Sbjct: 504 YSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMI 563
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
T + D+ S L +L+ S +E K S+
Sbjct: 564 TKNIALDSKIISTLSTSLVAS---NEGKALLQSL 594
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 175/353 (49%), Gaps = 5/353 (1%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGY---LPESSTFDYTVTCLVTGLDLNETCGILDT 210
NT+L L A A+LR M + P + ++ + L ++ G+L +
Sbjct: 81 NTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRS 140
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
GV+ TY L+ L A + + + + + NV Y+ ++ +CK
Sbjct: 141 MRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGR 200
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+ ++ EM ++ I P++V + LI CK + K ++ M++ G +P+ T+N
Sbjct: 201 WEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNV 260
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I+C+C+ ++A+ L +M E GV P+ +TYN LI+ L + ++ ++ L ++M +
Sbjct: 261 LINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGK 320
Query: 391 --ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ P++ TFN++IQ C + ++ +A + M G + +Y+ LI L++ + +
Sbjct: 321 NIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRK 380
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
A + M G PDS+T +++++ + + + A D++ T ++RGI + F
Sbjct: 381 AMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELF 433
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/483 (26%), Positives = 212/483 (43%), Gaps = 58/483 (12%)
Query: 36 MSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR 95
M + C P +N L+H CR G A +L+K+M GY P Y ILI G C+ +
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61
Query: 96 VA--EVF----RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
+ EV R M E V N+ V + RCL FE
Sbjct: 62 LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFT----RCLCCIGKFE------------- 104
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+A ++R+M +G++P+SST+ + L + + +
Sbjct: 105 ------------------KAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQ 146
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+ G+ P TY L++ K G + + + + +D NV +Y +I + K
Sbjct: 147 EMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTR 206
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML---------LECG 320
+ RA EI M PN+VT+ LI GHCK E K ++ + ++
Sbjct: 207 KLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIY 266
Query: 321 FK--------PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
F+ P+ T+ +++D LC+AH+ ++A D L M G PN I Y+ LI C
Sbjct: 267 FRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCK 326
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
+G + + +F KM SP++YT+++LI + +++ A K ML P+
Sbjct: 327 VGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVI 386
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y+ ++ L K G+ DEA + L ME+ GC P+ T +++ + GR + ++++
Sbjct: 387 YTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMT 446
Query: 493 ERG 495
+G
Sbjct: 447 SKG 449
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/513 (23%), Positives = 226/513 (44%), Gaps = 52/513 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P + Y+ VI L ++ ++ A+ FQ+M + PD +TY L+ C++G++++A
Sbjct: 117 GFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQA 176
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+M+ G APNV TYT LI + ++++ + E+M PN T +L+ G
Sbjct: 177 RNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDG 236
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + KA ++ R M+ + + V + +R+ ++ + P
Sbjct: 237 HCKAGETEKACQIYAR-MKNDKVDIPDV--DIYFRIVDSELKE---------------PN 278
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ V L + E +L+T G +P Y L++ K G+ E
Sbjct: 279 VVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFT 338
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ NV +Y+ +ID K +D A ++ +M + APN+V + ++ G CK
Sbjct: 339 KMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVG 398
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L++M+ E G P+ T+ +MID +A R + L+ L M G PN ITY
Sbjct: 399 KTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYR 458
Query: 365 ILIRSLCAIG---------------------------------DVARSLRLFQKMQADRI 391
+LI CA G + SL L ++ D
Sbjct: 459 VLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELSEDGS 518
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
P + + LI +F + ++E A + + + N +Y +LI++L + + D+A +
Sbjct: 519 VPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQN-TYVSLIESLTLACKVDKAFK 577
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ M + G P+ +++ L++ G++EEA
Sbjct: 578 LYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEA 610
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/479 (23%), Positives = 204/479 (42%), Gaps = 25/479 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICR------I 58
G PS ++N+++ A +S AY ++M + +P YNILI GIC +
Sbjct: 6 GCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSM 65
Query: 59 GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
V+ A R +M +G N C + + + V+ M + P+ +T
Sbjct: 66 EVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTY 125
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMG 177
++ + KAF+L + M+R +T + TLL R + +A +M
Sbjct: 126 SKVIGYLCNASKVEKAFQLF-QEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQ 184
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
G P T+ + + L+ I + + G P TY L++ KAG
Sbjct: 185 QDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETE 244
Query: 238 EG-----------------DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
+ D Y V + NV +Y ++D CK + + A ++
Sbjct: 245 KACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLET 304
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M PN + ++ LI G CK ++ + +E+ +L G P+ +T++S+ID L + R
Sbjct: 305 MSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKR 364
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
+ AL L++M+E PN + Y ++ LC +G + RL M+ P++ T+ A
Sbjct: 365 LDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTA 424
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
+I F + ++++ + M + G P+ +Y LI +G D+A + M+Q
Sbjct: 425 MIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQT 483
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 151/346 (43%), Gaps = 25/346 (7%)
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA-- 233
M G P F+ V D +L + G +P + Y +L+ +
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61
Query: 234 --GRDVEG--DRYLNHVFKDRLVSN-VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
+V G +R N + + +V N VN N C C + ++A + REM + P
Sbjct: 62 LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFT-RCLCCIGKFEKAYNVIREMMSKGFIP 120
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+ T++ +I C ++V K +L + G PD +T+ +++D C+ E A +
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
EM + G PN +TY LI + ++R+ +F+ M ++ P+I T+ ALI C+
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKA 240
Query: 409 NKIEKAEKAF----------------FSMLTLGLR-PDNFSYSALIKALIKSGRFDEAKQ 451
+ EKA + + F ++ L+ P+ +Y AL+ L K+ + EA+
Sbjct: 241 GETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARD 300
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+M GC P+ + +++ + G+ +EA ++ G S
Sbjct: 301 LLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCS 346
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 41/222 (18%)
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI------- 367
M++ G P FNS++ CR+ + A L +MV G P + YNILI
Sbjct: 1 MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTE 60
Query: 368 ----------------------------------RSLCAIGDVARSLRLFQKMQADRISP 393
R LC IG ++ + ++M + P
Sbjct: 61 DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
D T++ +I C +K+EKA + F M G+ PD ++Y+ L+ K G ++A+ F
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
M+Q+GC P+ T ++ ++ + A++I + G
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNG 222
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 218/486 (44%), Gaps = 8/486 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
GI P+ YN ++D+ K + +M C P+ TYN+LI+G+ + G ++
Sbjct: 228 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQ 287
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+ +M G + YTY LI G+ N +AE + E M + P AT S ++
Sbjct: 288 AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIY 347
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY---RLSNNSMASEAAAILRKMGDRG 180
G+ + A + L + L + NTL+Y RL N A LR +
Sbjct: 348 GLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSI---- 403
Query: 181 YL-PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
YL P T++ + L +L + I G+ P TY +L+ K G
Sbjct: 404 YLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMA 463
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + + + L + +Y I K+ RA + EM + P+L+ +N ++ G
Sbjct: 464 QEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDG 523
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK + + ELL ++ G PD T+ S+I R + EM+ G+ P+
Sbjct: 524 LCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPS 583
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+TY +LI G + R+ F +MQ I P++ T+N+LI C++ ++++A F
Sbjct: 584 VVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFA 643
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M+ G+ P+ +SY+ LI G + EA + M G PDS T + +L+ L +
Sbjct: 644 EMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDC 703
Query: 480 RFEEAH 485
+ + H
Sbjct: 704 KLQAVH 709
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 227/488 (46%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
S ++ + +I K + ++ F +M + PD N ++ + ++ +A+ +
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 222
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
+ M G P + TY L+D +C +V + +L M+ R PN+ T L++G+ +
Sbjct: 223 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 282
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+ +A L+ ++ N L+Y N M +EA ++ +M +G P +T+
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ + L +++ L + + P +Y L+ + G ++ + +
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
L + +YN ++D C+ ++ A ++ EM + IAP++VT+ L++G CK +
Sbjct: 403 IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSM 462
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+E +L G + D + + + I + A EM+ G PP+ I YN+++
Sbjct: 463 AQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVD 522
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
LC +G++ + L QKM +D + PD T+ ++I + ++ K + F+ ML+ GL P
Sbjct: 523 GLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTP 582
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+Y+ LI GR + A F M++ G P+ T N ++ L + R ++A++
Sbjct: 583 SVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFF 642
Query: 489 KTSKERGI 496
E+GI
Sbjct: 643 AEMVEKGI 650
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+YN ++D +CK + + ++ EM+ R APN VT+N LI+G K E + + L+ +
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
L+ G K +T+N +I +AL EMV G P TYN I LC +G +
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+ +++ M A+ + PD+ ++N LI +CR+ + KA F + ++ L P +Y+ L
Sbjct: 356 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 415
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ L + G + A+Q + M G PD T +++ + G A + G+
Sbjct: 416 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475
Query: 497 SFKSF 501
S+
Sbjct: 476 ELDSY 480
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 124/255 (48%)
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + K RL +V + N ++ ++M +A E+ R M + I P +VT+NTL+ +CK
Sbjct: 187 FDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCK 246
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+V + +LL + G P+ T+N +I+ L + FE A + EM++ G+ + T
Sbjct: 247 GGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYT 306
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN LI G +A +L L ++M SP + T+N+ I C++ ++ A + ML
Sbjct: 307 YNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDML 366
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
L PD SY+ LI + G +A F + P T N +L+ L +QG E
Sbjct: 367 ANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELE 426
Query: 483 EAHDIVKTSKERGIS 497
A + GI+
Sbjct: 427 VAQQLKVEMINEGIA 441
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 23/225 (10%)
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH-KTRELLVMLLEC 319
+++ + N+M A + +R I N+ ++ G C +EV K +LL+ +
Sbjct: 121 ILEILAQNNLMRSAYWVM----ERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWV--- 173
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
++ SM+ E L +M++ + P+ N ++R L ++++
Sbjct: 174 ------YSKKSMV---------EQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKA 218
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+ +++ M I P I T+N L+ S+C+ K+++ M G P++ +Y+ LI
Sbjct: 219 VEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLING 278
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
L K G F++AK M + G +YT N ++ +G EA
Sbjct: 279 LSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEA 323
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 92/204 (45%), Gaps = 26/204 (12%)
Query: 318 ECGFKPDKFTFNSMIDCLCR------------------AHRFEDAL--DCLSEMVEWGVP 357
+ GF+ +F F ++++ L + HR D L C+S V
Sbjct: 108 QPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEV----- 162
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
+ ++LI V + L +F KM R+SPD+ N +++ + + KA +
Sbjct: 163 -SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEV 221
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
+ +M G++P +Y+ L+ + K G+ + M++ GC P+ T N+++ L +
Sbjct: 222 YRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSK 281
Query: 478 QGRFEEAHDIVKTSKERGISFKSF 501
+G FE+A ++ + G+ ++
Sbjct: 282 KGEFEQAKGLIGEMLKTGLKVSAY 305
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 222/488 (45%), Gaps = 30/488 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PSTR N ++ LV S + F + +PD Y + + +D+
Sbjct: 117 GFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKG 176
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+K M G P+V+ Y +++ G C +R+ + ++ + M +RN+ PN T +L+ G
Sbjct: 177 FELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDG 236
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP- 183
+ +A R E+ + N+LL L + +A +L +M G+LP
Sbjct: 237 YCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPG 296
Query: 184 ---------------ESSTFD--------YTVTCLVTGL----DLNETCGILDTFIKRGV 216
+ FD T L+ GL + + +L ++ GV
Sbjct: 297 GFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGV 356
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR-LVSNVNSYNMVIDCFCKVNMMDRAT 275
P +Y +L+ A + G DV+ ++R L N ++N VI FC+ +D A
Sbjct: 357 TPSKISYNILVNAYCQEG-DVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAE 415
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
R M ++ ++P + T+N+LI+G+ + + E L + + G KP+ ++ S+I+CL
Sbjct: 416 TWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCL 475
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
C+ + DA L++M+ GV PN YN+LI + C++ + + R F +M I +
Sbjct: 476 CKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATL 535
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
T+N LI R +++KAE F M G PD +Y++LI KS + + +
Sbjct: 536 VTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDK 595
Query: 456 MEQNGCNP 463
M+ G P
Sbjct: 596 MKILGIKP 603
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 131/517 (25%), Positives = 226/517 (43%), Gaps = 29/517 (5%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+T YN +ID K I+ A ++M + + TYN L++G+C G VD+A +
Sbjct: 225 PNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREV 284
Query: 68 VKQMEGLGYAPNVY----------------------------TYTILIDGFCNAKRVAEV 99
+ +MEG G+ P + TY IL++G C R+ +
Sbjct: 285 LLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKA 344
Query: 100 FRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
VL + E V P++ + LV+ + D KA + ER ++ NT++ +
Sbjct: 345 EEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISK 404
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
A +R+M ++G P T++ + LD K G+KP
Sbjct: 405 FCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPN 464
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
+Y L+ L K + ++ + L + + N YNM+I+ C ++ + A
Sbjct: 465 VISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFD 524
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
EM I LVT+NTLI+G ++ V K +L + + G PD T+NS+I ++
Sbjct: 525 EMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSV 584
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ L+ +M G+ P T++ LI + C V ++FQ+M + PD + +N
Sbjct: 585 NTQKCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYN 643
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
+I S+ + KA M+ G+ D +Y++LI A ++ R E K M+
Sbjct: 644 EMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAK 703
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G P T N++++ L F A+ + ERG+
Sbjct: 704 GLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGL 740
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 178/372 (47%), Gaps = 28/372 (7%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
N LL L ++ + A+ + D G P++ + V V DL++ ++ + +K
Sbjct: 126 NRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVK 185
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G+ P Y L++ L K R + + + + + +V N +YN +ID +CKV ++
Sbjct: 186 DGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEE 245
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF------- 326
A M+++++ NLVT+N+L++G C V RE+L+ + GF P F
Sbjct: 246 ALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDD 305
Query: 327 ---------------------TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
T+ +++ LCR R E A + L+++VE GV P+ I+YNI
Sbjct: 306 HSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNI 365
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L+ + C GDV +++ ++M+ + P+ TFN +I FC +++ AE M+ G
Sbjct: 366 LVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKG 425
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ P +Y++LI + G F + M++ G P+ + ++ L + + +A
Sbjct: 426 VSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAE 485
Query: 486 DIVKTSKERGIS 497
++ RG+S
Sbjct: 486 IVLADMIGRGVS 497
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 175/401 (43%), Gaps = 36/401 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++PS YN +++A + + A L +QM +P+R T+N +I C G VD A
Sbjct: 355 GVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHA 414
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH- 123
V++M G +P V TY LI+G+ F L+ M + + PN + SL++
Sbjct: 415 ETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINC 474
Query: 124 ----------------GVFRCLDPH-KAFELLI-------------RF---MEREPLTQK 150
+ R + P+ + + +LI RF M + +
Sbjct: 475 LCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDAT 534
Query: 151 LVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
LV NTL+ L N +A + +M +G P+ T++ ++ ++ + + D
Sbjct: 535 LVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYD 594
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
G+KP T+ L+ A K G V D+ + + LV + YN +I + +
Sbjct: 595 KMKILGIKPTVGTFHPLIYACRKEGV-VTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDG 653
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+ +A + ++M D+ + + VT+N+LI + +D V + + L+ + G P T+N
Sbjct: 654 NVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYN 713
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+I LC F A EMVE G+ N LI L
Sbjct: 714 ILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGL 754
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 82/169 (48%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
GF P + N ++ L + FE L +++++ G P+ + Y +++ + D+ +
Sbjct: 117 GFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKG 176
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
L + M D + P ++ +N ++ C++ +I+ A K F M+ + P+ +Y+ LI
Sbjct: 177 FELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDG 236
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
K G +EA M++ + T N +L L GR ++A +++
Sbjct: 237 YCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVL 285
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 1/230 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + YN +I+ L ++ + A F QM+ C PD TYN LI G + +
Sbjct: 530 GIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKC 589
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M+ LG P V T+ LI C + V + ++ + M + ++ P++ +++
Sbjct: 590 LELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYS 648
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KA L + +++ K+ N+L+ + SE ++ M +G +P+
Sbjct: 649 YAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPK 708
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
T++ + L D N ++RG+ S L+ L + G
Sbjct: 709 VDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEG 758
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 1/172 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ LGI P+ ++ +I A K + + + FQ+M PD+F YN +I+ G
Sbjct: 596 MKILGIKPTVGTFHPLIYACRKEGVVTMDKM-FQEMLQMDLVPDQFVYNEMIYSYAEDGN 654
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V +A+ L +QM G + TY LI + +RV+E+ +++ MK + + P T
Sbjct: 655 VMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNI 714
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAI 172
L+ G+ D + A+ +ER L +C L+ L M EA +
Sbjct: 715 LIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIV 766
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Query: 328 FNSMIDCLCRAHR-FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
F+ + LC + ++A D S M + G P+T + N L+R+L ++L +F +
Sbjct: 89 FSDNLLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADV 148
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
PD + +Q+ + ++K + SM+ G+ P F+Y+ ++ L K R
Sbjct: 149 IDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRI 208
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+A++ F M Q P++ T N +++ + G EEA + KE+ +
Sbjct: 209 KDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNV 258
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/508 (24%), Positives = 230/508 (45%), Gaps = 44/508 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P L +I +I+ A + ++ +PD F YN +I G C++ ++ A
Sbjct: 98 GYTPDVILCTKLIKGFFNFKNIEKAS-RVMEILESHTEPDVFAYNAVISGFCKVNRIEAA 156
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ +M+ G+ P++ TY I+I CN +++ +VL+ + N P T L+
Sbjct: 157 TQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEA 216
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+EA +L +M RG LP+
Sbjct: 217 TIV-----------------------------------EGGINEAMKLLEEMLARGLLPD 241
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + + ++ + +G KP +Y +L+ A G+ EG++ +
Sbjct: 242 MYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVA 301
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+F N +Y+++I C+ +D A + + M ++++ P+ +++ LIS CK+
Sbjct: 302 EMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEG 361
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ ++ ++ G PD +N+++ LC+ AL+ +++ G PPN +YN
Sbjct: 362 RLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYN 421
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I +L + GD +R+L + M + + PD T+N+LI CR +E+A M
Sbjct: 422 TMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQS 481
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G RP SY+ ++ L K R D+A F M + GC P+ T L++E + G EA
Sbjct: 482 GFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEA 541
Query: 485 HDIVKTSKERGI----SF----KSFPGL 504
++ + R + SF K+FP L
Sbjct: 542 MELANSLFSRDVISQDSFKRLNKTFPML 569
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 142/270 (52%), Gaps = 1/270 (0%)
Query: 232 KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
KAG+ E +L + +V +I F +++A+ + E+ + P++
Sbjct: 80 KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRV-MEILESHTEPDVF 138
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
+N +ISG CK + ++L + GF PD T+N MI LC + AL L ++
Sbjct: 139 AYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQL 198
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
+ P ITY ILI + G + +++L ++M A + PD+YT+NA+I+ C+ +
Sbjct: 199 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 258
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
E+A + S+ + G +PD SY+ L++A + G++DE ++ M GC P+ T +++
Sbjct: 259 ERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 318
Query: 472 LETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ +L + GR +EA ++K E+ ++ ++
Sbjct: 319 ISSLCRFGRIDEAISVLKVMIEKELTPDTY 348
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 212/444 (47%), Gaps = 35/444 (7%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
CK + +++LI R G+V +AL + M G+ P+VYT +L+ ++V V+
Sbjct: 94 CKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVW 153
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
+ M R VCP+ +T F +LI + E +K
Sbjct: 154 LFFKEMLARRVCPDVST-----------------FNILINVLCVEGKLKK---------- 186
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
A +L+KM + GY+P T++ + ++D +G++
Sbjct: 187 --------AGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADA 238
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY +L++ L K R +G L + K + N +YN +I+ F K + AT I +E
Sbjct: 239 CTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQE 298
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M ++ PN VT+N LI GHC D + +L M+ G KP++ +++++++ LCR +
Sbjct: 299 MSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAK 358
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
FE + L M G+ I Y +I LC G + S++L KM D + PD+ TF+
Sbjct: 359 FELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSV 418
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI FCR+ KI+ ++ M GL P++ Y+ LI K+G EA + +++M + G
Sbjct: 419 LINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIG 478
Query: 461 CNPDSYTSNLILETLVQQGRFEEA 484
+ + + N+++ +L + G+ A
Sbjct: 479 YDANCFICNVLVSSLCKDGKVGVA 502
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 215/480 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +PS N ++ LVK + +L F++M + PD T+NILI+ +C G + +A
Sbjct: 128 GFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKA 187
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+K+ME GY P+V TY +++ +C R +++ M + + + T LV
Sbjct: 188 GYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDD 247
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + K + LL + +R ++ N+++ A I ++M LP
Sbjct: 248 LCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPN 307
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + + IL+ G KP +Y L+ L + + L
Sbjct: 308 CVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILE 367
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++ +Y +ID C+ +++ + ++ +M + P++VTF+ LI+G C+
Sbjct: 368 RMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVG 427
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ +E++ + + G P+ + ++I C+ +A M G N N
Sbjct: 428 KIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICN 487
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+L+ SLC G V + F M P+ TF+ +I + KA F M+
Sbjct: 488 VLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKA 547
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G P +F+Y L+KAL ++G+F EAK+ + D+ T N IL + G +A
Sbjct: 548 GHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDA 607
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 220/482 (45%), Gaps = 2/482 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P++ +Y +I K+ + A+ + MS + F N+L+ +C+ G V A
Sbjct: 443 GLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVA 502
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
M +G PN T+ +I+G+ N+ + F + + M + P+ T L+
Sbjct: 503 EYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKA 562
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R +A LL + + NT+L + M ++A A+ +M R LP+
Sbjct: 563 LCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPD 622
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRG-VKPRFSTYLLLMEALYKAGRDVEGDRYL 243
S T+ L+ + + +G V P Y ++ L++AG+ +
Sbjct: 623 SYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFC 682
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR-DIAPNLVTFNTLISGHCK 302
+ K+ L +++ + N++++ + ++ M +A +I M I+P+L T+N L+ G+ K
Sbjct: 683 EDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAK 742
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ K L +++ G PDK T +S+I C++ + L L +M+ GV + T
Sbjct: 743 KKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCT 802
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+N+LI C +V ++ L M I PD+ T +++I R++ ++++ ML
Sbjct: 803 FNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEML 862
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G PD Y AL+ + + G A + ME G + + ++ L + G+ E
Sbjct: 863 ERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVE 922
Query: 483 EA 484
EA
Sbjct: 923 EA 924
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 134/560 (23%), Positives = 226/560 (40%), Gaps = 82/560 (14%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP+ YN++I+ VK I A FQ+MS+ P+ TYN LI G C G ++AL
Sbjct: 269 ISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQAL 328
Query: 66 RLVKQMEGLGYAPN-----------------------------------VYTYTILIDGF 90
+++ ME G PN YT +IDG
Sbjct: 329 TILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGL 388
Query: 91 CNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC-----------------LDPH- 132
C + E ++L+ M + V P+ T L++G R L P+
Sbjct: 389 CRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNS 448
Query: 133 -----------------KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
+AF++ + +CN L+ L + A
Sbjct: 449 IIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHH 508
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGI-----LDTFIKRGVKPRFSTYLLLMEAL 230
M G +P S TFD C++ G N G+ D IK G P TY L++AL
Sbjct: 509 MSKIGNVPNSITFD----CIINGYG-NSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKAL 563
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
+AG+ E R L+ + + +YN ++ K M+ A + EM R++ P+
Sbjct: 564 CRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDS 623
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECG-FKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
T+ + +G + ++ LL G P+K + + +D L RA + + AL
Sbjct: 624 YTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCE 683
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD-RISPDIYTFNALIQSFCRM 408
+M + G+ + I N+++ +G +A++ +F M + ISP + T+N L+ + +
Sbjct: 684 DMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKK 743
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+ K + M+ G+ PD + +LI KS D + M +G D T
Sbjct: 744 KNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTF 803
Query: 469 NLILETLVQQGRFEEAHDIV 488
N+++ + +A D+V
Sbjct: 804 NMLIMKYCETDEVGKAFDLV 823
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/478 (22%), Positives = 213/478 (44%), Gaps = 2/478 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+PS +++ +I ++ + A F+ M + P +T N+L+ + + V
Sbjct: 97 NPS--VFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWL 154
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
K+M P+V T+ ILI+ C ++ + +L+ M+E P+ T ++++
Sbjct: 155 FFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYC 214
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A EL+ + + N L+ L N+ +++ +L+KM R P
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEI 274
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + V + I + P TY L++ G + L +
Sbjct: 275 TYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMM 334
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
N SY+ +++ C+ + + I MR + + + +I G C++ +
Sbjct: 335 EATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLL 394
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+++ +LL +L+ G PD TF+ +I+ CR + ++ + + +M + G+ PN+I Y L
Sbjct: 395 NESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTL 454
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I + C GDV + +++ M + + N L+ S C+ K+ AE F M +G
Sbjct: 455 IYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGN 514
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
P++ ++ +I SG +A F M + G +P +T +L+ L + G+F+EA
Sbjct: 515 VPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEA 572
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/497 (22%), Positives = 219/497 (44%), Gaps = 7/497 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS Y ++ AL ++ A ++ D TYN ++ + G++ +A
Sbjct: 548 GHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDA 607
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCN-AKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ L +M P+ YTY I+ G K VA + ++ + V P + + V
Sbjct: 608 VALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVD 667
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+FR KA ME+ L L+ N +L S ++A I M +
Sbjct: 668 GLFRA-GQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITI 726
Query: 183 -PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP-RFSTYLLLMEALYKAGRDVEGD 240
P +T++ + +L++ + + ++ G+ P + + + L++ A DV G
Sbjct: 727 SPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDV-GL 785
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L + D + + ++NM+I +C+ + + +A ++ M DI P++ T +++IS
Sbjct: 786 KLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVL 845
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ + V ++ LL +LE G PD+ + ++++ +CR A EM G+
Sbjct: 846 SRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGD 905
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ + L+R L G V + + M + P I TF L+ FCR + +A K +
Sbjct: 906 VAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDT 965
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG- 479
M ++ D +Y+ LI L G A + + ++Q G P+ T ++++ +
Sbjct: 966 MDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDI 1025
Query: 480 RFEEAHDIVKTSKERGI 496
+ ++K +ERG+
Sbjct: 1026 SLAKGEVLLKDLQERGV 1042
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/526 (21%), Positives = 208/526 (39%), Gaps = 45/526 (8%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y A+ID L ++ ++ + +M D PD T+++LI+G CR+G + ++ +M
Sbjct: 381 YTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMY 440
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE--------------RNVC------ 112
G APN YT LI +C V E F+V M ++C
Sbjct: 441 KAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVG 500
Query: 113 ---------------PNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL 157
PN T +++G + KAF + ++ LL
Sbjct: 501 VAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLL 560
Query: 158 YRLSNNSMASEAAAILRKMGDRGYLPES-STFDYT---VTCLVTGLDLNETCGILDTFIK 213
L EA +L K+ Y+P + T Y V +G+ L + + D ++
Sbjct: 561 KALCRAGKFKEAKRLLDKLH---YIPSAVDTVTYNTILVETFKSGM-LTDAVALFDEMVQ 616
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNS-YNMVIDCFCKVNMMD 272
R V P TY ++ L + G+ V + ++ VS Y +D +
Sbjct: 617 RNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSK 676
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE-CGFKPDKFTFNSM 331
A C +M + +L+ N +++G+ + ++ K ++ M+ P T+N +
Sbjct: 677 AALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNIL 736
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
+ + + + M+ G+ P+ +T + LI C + L+L +KM D +
Sbjct: 737 LHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGV 796
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
+ D TFN LI +C +++ KA M + PD ++ ++I L + E+
Sbjct: 797 AVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHL 856
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M + GC PD ++ + + G A + + GIS
Sbjct: 857 LLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGIS 902
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 99/217 (45%), Gaps = 1/217 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ I P ++++I L + +++ ++L +M C PDR Y L++ +CR+G
Sbjct: 826 MNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGH 885
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A +L +ME LG + + L+ G +V E VL+ M +++ P AT +
Sbjct: 886 IHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTT 945
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+H R +A +L + + N L+ L + + A + +++ RG
Sbjct: 946 LMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRG 1005
Query: 181 YLPESSTFDYTVTCLVTG-LDLNETCGILDTFIKRGV 216
P +T+ + + T + L + +L +RGV
Sbjct: 1006 LWPNMTTYCILIDAIFTNDISLAKGEVLLKDLQERGV 1042
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 219/484 (45%), Gaps = 35/484 (7%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+ + ++A K D A +M C + TYN+LI G+CR G V+EA K ME
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G P+ +TY LI+G C ++R E +L+ M + PN +L+ G R
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR----- 339
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A EA ++++M G P T+D V
Sbjct: 340 ------------------------------EGNADEAFKMIKEMVAAGVQPNKITYDNLV 369
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L ++ +L ++ +P TY L++E ++ + R L+ + +
Sbjct: 370 RGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGIS 429
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
NV +Y+++I C+ ++A+++ EM + + PN + LISG+C++ V E+
Sbjct: 430 PNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEI 489
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+ + PD + +NS+I L + R E++ ++M E G+ PN TY+ LI
Sbjct: 490 FDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLK 549
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
GD+ + +L Q+M + P+ + L++S+ + + IEK F SML G+ DN
Sbjct: 550 NGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRI 609
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y LI L SG + A + +E+NG PD + + ++ L + E+A I+
Sbjct: 610 YGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 669
Query: 493 ERGI 496
++G+
Sbjct: 670 KKGV 673
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/497 (24%), Positives = 227/497 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +T YN +I L +S +++ A+ + M PD FTY LI+G+C+ +EA
Sbjct: 252 GCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEA 311
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M PNV Y LIDGF E F++++ M V PN+ T +LV G
Sbjct: 312 KALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRG 371
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A LL + + + N ++ + +A +L +M + G P
Sbjct: 372 LCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPN 431
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L + + +L+ +G+KP Y L+ + G +
Sbjct: 432 VYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFD 491
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K ++ ++ YN +I KV ++ +T+ +M++R + PN T++ LI G+ K+
Sbjct: 492 KMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNG 551
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ +L+ +L+ G KP+ + +++ ++ E M++ GV + Y
Sbjct: 552 DLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYG 611
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
ILI +L + G++ + R+ ++ + PD++ +++LI C+ EKA M
Sbjct: 612 ILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKK 671
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ P+ Y+ALI L KSG A+ F S+ G P+ T +++ + G A
Sbjct: 672 GVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 731
Query: 485 HDIVKTSKERGISFKSF 501
+ GI+ +F
Sbjct: 732 FYLYNEMLATGITPDAF 748
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 200/477 (41%), Gaps = 36/477 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP+ Y+ +I L +S + A ++M+ KP+ F Y LI G CR G V A
Sbjct: 427 GISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 486
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M + P++Y Y LI G RV E + M+ER + PNE T L+HG
Sbjct: 487 CEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHG 546
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D A +L+ R ++ ++ LL + + ++ + M D+G + +
Sbjct: 547 YLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLD 606
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + L + ++ +L K G P Y L+ L K + L+
Sbjct: 607 NRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILD 666
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K + N+ YN +ID CK + A + + + + PN VT+ +LI G CK
Sbjct: 667 EMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVG 726
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ L +L G PD F Y+
Sbjct: 727 DISNAFYLYNEMLATGITPDAF-----------------------------------VYS 751
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+L + GD+ +++ L ++M R I +FN L+ FC+ K+++ K ++
Sbjct: 752 VLTTGCSSAGDLEQAMFLIEEMFL-RGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGR 810
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
GL P+ + +I L ++G+ E F+ ++Q + + + ++ QG+
Sbjct: 811 GLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKI 867
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 126/244 (51%)
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
+ ++ +CKV D A ++ EMR+R N VT+N LI+G C+ V + +
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
+ G PD FT+ ++I+ LC++ R +A L EM + PN + Y LI G+
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+ ++ ++M A + P+ T++ L++ C+M ++++A M+ RPD +Y+ +I
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ + +A + ME G +P+ YT ++++ L Q G E+A D+++ +G+
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 464
Query: 498 FKSF 501
+F
Sbjct: 465 PNAF 468
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/492 (22%), Positives = 206/492 (41%), Gaps = 61/492 (12%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN++I L K ++ + F QM P+ FTY+ LIHG + G ++ A +L
Sbjct: 500 PDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQL 559
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
V++M G PN Y L++ + + + +V + M ++ V + + ++G+
Sbjct: 560 VQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV-----MLDNRIYGI-- 612
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
L++ LS++ A +L + G +P+
Sbjct: 613 ----------------------------LIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHV 644
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ ++ L D + GILD K+GV P Y L++ L K+G N +
Sbjct: 645 YSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSIL 704
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
LV N +Y +ID CKV + A + EM I P+ ++ L +G ++
Sbjct: 705 AKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLE 764
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ L+ + G +FN+++D C+ + ++ L L ++ G+ PN +T +I
Sbjct: 765 QAMFLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENII 823
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
L G ++ +F ++Q F++L F M+ G
Sbjct: 824 SGLSEAGKLSEVHTIFVELQQKTSESAARHFSSL----------------FMDMINQGKI 867
Query: 428 PDNFSYSALIKALIKSGRFDEA---KQTFLSMEQN-GCNPDSYTSNLILETLVQQGRFEE 483
P + +I+ K G D+A + ++ GC+ SY + I++ L ++G+ E
Sbjct: 868 PLDV-VDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCS--SYLA--IVDNLCRKGKLSE 922
Query: 484 AHDIVKTSKERG 495
A +++K +RG
Sbjct: 923 ALNLLKEMDKRG 934
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 232/497 (46%), Gaps = 31/497 (6%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+PS +N ++ L K + + QM + DR T NIL++ +C + + E
Sbjct: 66 TPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFA 125
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+ GY+PN+ TY LI G C R++E R+ M++ P+ T +L+ G+
Sbjct: 126 AFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLC 185
Query: 127 RCLDPHKAFEL---LIRFMEREPLTQK---LVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + A +L ++ + R + K + N ++ L EA + +M +G
Sbjct: 186 GTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQG 245
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P + + +G++P T+ +L++ L K G+ +E
Sbjct: 246 MIP-------------------------NEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAK 280
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L + + +V ++ +YN +I+ FC V ++ A E+ M + P+++++N LI+G+
Sbjct: 281 KLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGY 340
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K +V + +L +L G +P+ T++S++ + A + +DA S M G+ N+
Sbjct: 341 SKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENS 400
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
TY I + LC + +++LF ++++ +I N LI C+ K+E A + F
Sbjct: 401 YTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEK 460
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+ G P+ +Y+ +I + G+ D+A ME NGC PD T N ++ + +
Sbjct: 461 LSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNK 520
Query: 481 FEEAHDIVKTSKERGIS 497
EE ++ ++ +S
Sbjct: 521 LEEVVQLLHRMAQKDVS 537
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 199/450 (44%), Gaps = 31/450 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP+ YN +I L + I A F +M C PD TY LI G+C G ++ A
Sbjct: 134 GYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIA 193
Query: 65 LRLVKQMEG------LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
L+L ++M + PNV TY I++DG C R E ++ E MK + + PNE
Sbjct: 194 LKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLD 253
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
+ L +P + N L+ L EA +L M +
Sbjct: 254 QGL-----------------------QP--DMVTFNVLIDTLCKEGKVIEAKKLLGVMIE 288
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G +P+ T++ + DLN + + +G +P +Y +L+ K + E
Sbjct: 289 SGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEE 348
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ N + NV +Y+ ++ +D A ++ M+ IA N T+ +
Sbjct: 349 AMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLD 408
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G CK+ + + +L L FK + N +ID LC+A + E A + ++ G P
Sbjct: 409 GLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEP 468
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N +TY I+I C G V ++ L QKM+A+ +PDI T+N L++ F NK+E+ +
Sbjct: 469 NVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLL 528
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
M + PD + S ++ L K ++ E
Sbjct: 529 HRMAQKDVSPDAITCSIVVDMLSKDEKYQE 558
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 164/357 (45%), Gaps = 16/357 (4%)
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
+ N A+ A M P S+F++ ++ L ++ + + G+
Sbjct: 45 TGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDR 104
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
T +L+ L R EG + + N+ +YN +I C + + AT +
Sbjct: 105 CTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLR 164
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL------ECGFKPDKFTFNSMIDC 334
M+ P++VT+ TLI G C ++ +L +L E KP+ T+N ++D
Sbjct: 165 MQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDG 224
Query: 335 LCRAHRFEDALDCL----------SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
LC+ R ++A +EM++ G+ P+ +T+N+LI +LC G V + +L
Sbjct: 225 LCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLG 284
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
M I PD+ T+N+LI+ FC + + A + F SM + G PD SY+ LI K+
Sbjct: 285 VMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTL 344
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ +EA + + M G P+ T + +L+ + G+ ++A + K GI+ S+
Sbjct: 345 KVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSY 401
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 75/128 (58%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N +ID L K+ ++ A+ F+++S + +P+ TY I+IHG CR G VD+A L+++ME
Sbjct: 439 NCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEA 498
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G P++ TY L+ GF + ++ EV ++L M +++V P+ T +V + + +
Sbjct: 499 NGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQE 558
Query: 134 AFELLIRF 141
LL RF
Sbjct: 559 CLHLLPRF 566
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 84/171 (49%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ ++ Y +D L K++ + A F ++ K + N LI G+C+ G ++ A
Sbjct: 395 GIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETA 454
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +++ G+ PNV TYTI+I GFC +V + +++ M+ P+ T +L+ G
Sbjct: 455 WELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRG 514
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
+ + +LL R +++ + C+ ++ LS + E +L +
Sbjct: 515 FYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPR 565
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 3/216 (1%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
+G P+ Y++++ + + +D A F M + +TY I + G+C+ +
Sbjct: 358 LVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLF 417
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA++L +++ + + LIDG C A ++ + + E + PN T ++
Sbjct: 418 EAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMI 477
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
HG R KA +LI+ ME T ++ NTL+ ++ E +L +M +
Sbjct: 478 HGFCREGQVDKA-NVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDV 536
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTF-IKRGV 216
P++ T V L E +L F I++GV
Sbjct: 537 SPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGV 572
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 236/488 (48%), Gaps = 9/488 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS + Y+A++ AL + ++M +P+ +TY I I + R G +D+A
Sbjct: 222 GLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDA 281
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++K ME G P+V TYT+LID C A ++ + + M+ + P+ T +L+
Sbjct: 282 YGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSK 341
Query: 125 VFRCLDPHKAFELLIRF---MEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRG 180
+ E + RF ME + +V T+L L + +A +L M RG
Sbjct: 342 ----FGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRG 397
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P T++ ++ L+ L+E + + GV P +Y+L ++ K G +
Sbjct: 398 IVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKAL 457
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ K ++ ++ + N + ++ + A +I ++ + ++P+ VT+N ++ +
Sbjct: 458 DTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCY 517
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K ++ K +LL +L G +PD NS+ID L +A R ++A + + + P
Sbjct: 518 SKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTV 577
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TYNILI L G + ++L LF M+ P+ TFNAL+ C+ + ++ A K F
Sbjct: 578 VTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCR 637
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M + PD +Y+ +I LIK GR A + M++ +PD T +L +V+ GR
Sbjct: 638 MTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGR 696
Query: 481 FEEAHDIV 488
E+A IV
Sbjct: 697 VEDAIKIV 704
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 215/468 (45%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN +I L++ A +++M + KP TY+ L+ + R + L+++ME
Sbjct: 195 YNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEME 254
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
LG PN+YTYTI I A R+ + + +L+ M++ P+ T L+ +
Sbjct: 255 TLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLD 314
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
KA EL + + TL+ + N +M GY P+ T+ V
Sbjct: 315 KAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILV 374
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L +++ +LD RG+ P TY L+ L R E N++ +
Sbjct: 375 EALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVA 434
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
SY + ID + K+ ++A + +M+ R I P++ N + + + + +++
Sbjct: 435 PTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDI 494
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+ CG PD T+N M+ C +A + + A L+EM+ G P+ I N LI +L
Sbjct: 495 FNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYK 554
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G V + ++F +++ +++P + T+N LI + K+ KA F SM G P+ +
Sbjct: 555 AGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVT 614
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
++AL+ L K+ D A + F M C+PD T N I+ L+++GR
Sbjct: 615 FNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGR 662
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 214/472 (45%), Gaps = 11/472 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y +IDAL + +D A + +M KPD TY L+ G ++
Sbjct: 292 GCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETV 351
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R +ME GYAP+V TYTIL++ C + +V + F +L++M+ R + PN T +L+ G
Sbjct: 352 KRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISG 411
Query: 125 VFRCLDPHKAFELL--IRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMGDRGY 181
+ +A EL + + P V Y +L + +A KM RG
Sbjct: 412 LLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGD---PEKALDTFEKMKKRGI 468
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P + + ++ L + E I + G+ P TY ++M+ KAG+ + +
Sbjct: 469 MPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATK 528
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + + ++ N +ID K +D A ++ ++D +AP +VT+N LI+G
Sbjct: 529 LLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLG 588
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K+ ++ K +L + E G P+ TFN+++DCLC+ + AL M P+ +
Sbjct: 589 KEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVL 648
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN +I L G + + +M+ +SPD T L+ + ++E A K
Sbjct: 649 TYNTIIYGLIKEGRAGYAFWFYHQMK-KFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEF 707
Query: 422 L-TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
+ GL+ N + L++ ++ +EA E CN NLIL
Sbjct: 708 VHQSGLQTSNQVWGELMECILIEAEIEEAISF---AEGLVCNSICQDDNLIL 756
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 133/533 (24%), Positives = 227/533 (42%), Gaps = 44/533 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP + YN ++ K+ ID A +M + C+PD N LI + + G VDEA
Sbjct: 502 GLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEA 561
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +++ L AP V TY ILI G ++ + + MKE PN T +L+
Sbjct: 562 WQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLD- 620
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQ----KLVCNTLLYRLSNNSMASEAAAILRKMG--- 177
CL + A +L ++ R + L NT++Y L A A +M
Sbjct: 621 ---CLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFL 677
Query: 178 --------------------------------DRGYLPESSTFDYTVTCLVTGLDLNETC 205
G + + + C++ ++ E
Sbjct: 678 SPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAI 737
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNV-NSYNMVIDC 264
+ + + + L L+ L K + ++ + + K SYN ++D
Sbjct: 738 SFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDG 797
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
N+ + A ++ EM++ PN+ T+N L+ H K + + EL +L G KP+
Sbjct: 798 LLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPN 857
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
T N +I L +++ ALD E++ P TY LI L G ++++F+
Sbjct: 858 IITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFE 917
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+M + P+ +N LI F + + A F M+ G+RPD SY+ L++ L +G
Sbjct: 918 EMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTG 977
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
R D+A F ++ G +PD+ + NL++ L + R EEA + K RGIS
Sbjct: 978 RVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGIS 1030
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 129/502 (25%), Positives = 228/502 (45%), Gaps = 42/502 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+T +NA++D L K++++DLA F +M++ C PD TYN +I+G+ + G A
Sbjct: 607 GCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYA 666
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL-----------------EIMK 107
QM+ +P+ T L+ G RV + +++ E+M+
Sbjct: 667 FWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELME 725
Query: 108 ---------------ERNVCPNEATVRSLVHGVFR-------CLDPHKAFELLIRFMERE 145
E VC + +L+ + R LD K F+ + +
Sbjct: 726 CILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTH 785
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
P + C L+ L ++ A + +M + G P T++ + ++E
Sbjct: 786 PTPESYNC--LMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELF 843
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
+ + + RG KP T+ +++ AL K+ + + +Y +I
Sbjct: 844 ELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGL 903
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
K + A +I EM D PN +N LI+G K V+ +L +++ G +PD
Sbjct: 904 LKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDL 963
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
++ +++CL R +DA+ E+ G+ P+T++YN++I L + +L LF +
Sbjct: 964 KSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSE 1023
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M+ ISP++YT+NALI F +++A K F + +GL P+ F+Y+ALI+ KSG
Sbjct: 1024 MKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGN 1083
Query: 446 FDEAKQTFLSMEQNGCNPDSYT 467
D A F M GC+P++ T
Sbjct: 1084 KDRAFSVFKKMMIVGCSPNAGT 1105
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 220/500 (44%), Gaps = 3/500 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L ++P+ YN +I L K + A F M C P+ T+N L+ +C+ VD
Sbjct: 571 LKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDL 630
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL++ +M + +P+V TY +I G R F MK + + P+ T+ +L+
Sbjct: 631 ALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMK-KFLSPDHVTLYTLLP 689
Query: 124 GVFRCLDPHKAFELLIRFMEREPL-TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
GV + A ++++ F+ + L T V L+ + + EA + +
Sbjct: 690 GVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSIC 749
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKR-GVKPRFSTYLLLMEALYKAGRDVEGDR 241
+ + + L + + D F K G P +Y LM+ L +
Sbjct: 750 QDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALK 809
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ N+ +YN+++D K +D E+ EM R PN++T N +IS
Sbjct: 810 LFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALV 869
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K ++K +L ++ F P T+ +I L +A R E+A+ EM ++ PN
Sbjct: 870 KSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCA 929
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
YNILI G+V + LF++M + I PD+ ++ L++ +++ A F +
Sbjct: 930 IYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEEL 989
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
GL PD SY+ +I L KS R +EA F M+ G +P+ YT N ++ G
Sbjct: 990 KLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMV 1049
Query: 482 EEAHDIVKTSKERGISFKSF 501
++A + + + G+ F
Sbjct: 1050 DQAGKMFEELQFMGLEPNVF 1069
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/489 (25%), Positives = 213/489 (43%), Gaps = 37/489 (7%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+T Y + AL I A +M + ++YN LI+ + + G EAL+
Sbjct: 156 NPNT--YLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALK 213
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+ K+M G P++ TY+ L+ + + +LE M+ + PN T
Sbjct: 214 VYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYT--------- 264
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + IR + R +A IL+ M D G P+
Sbjct: 265 --------YTICIRVLGRA------------------GRIDDAYGILKTMEDEGCGPDVV 298
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + L L++ + KP TY+ LM G R+ + +
Sbjct: 299 TYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEM 358
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
D +V +Y ++++ CK +D+A ++ MR R I PNL T+NTLISG +
Sbjct: 359 EADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRL 418
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ EL + G P +++ ID + E ALD +M + G+ P+ N
Sbjct: 419 DEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNAS 478
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ SL +G + + +F + +SPD T+N +++ + + +I+KA K ML+ G
Sbjct: 479 LYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGC 538
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
PD ++LI L K+GR DEA Q F ++ P T N+++ L ++G+ +A D
Sbjct: 539 EPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALD 598
Query: 487 IVKTSKERG 495
+ + KE G
Sbjct: 599 LFGSMKESG 607
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 166/377 (44%), Gaps = 7/377 (1%)
Query: 122 VHGVFRCLDPHKAFELLIR-FMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
VHG R D F+L+ + + R P T T+ LS +A L KM G
Sbjct: 134 VHG--RVEDMAFVFDLMQKQVINRNPNTYL----TIFKALSIKGGIRQAPFALGKMRQAG 187
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
++ + +++ + L+ E + I G+KP TY LM AL +
Sbjct: 188 FVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIM 247
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L + L N+ +Y + I + +D A I + M D P++VT+ LI
Sbjct: 248 DLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDAL 307
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C ++ K +EL + KPD T+ +++ E SEM G P+
Sbjct: 308 CAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDV 367
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TY IL+ +LC G V ++ + M+ I P+++T+N LI + ++++A + F +
Sbjct: 368 VTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNN 427
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M +LG+ P +SY I K G ++A TF M++ G P N L +L + GR
Sbjct: 428 MESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGR 487
Query: 481 FEEAHDIVKTSKERGIS 497
EA DI G+S
Sbjct: 488 IREAKDIFNDIHNCGLS 504
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 147/321 (45%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P +YN L+ G+ + + AL+L +M+ G PN++TY +L+D +KR+ E+F +
Sbjct: 786 PTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFEL 845
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
M R PN T ++ + + +KA +L + + L+ L
Sbjct: 846 YNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLK 905
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+ EA I +M D P + ++ + ++N C + IK G++P +
Sbjct: 906 AGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKS 965
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y +L+E L+ GR + Y + L + SYN++I+ K ++ A + EM+
Sbjct: 966 YTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMK 1025
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+R I+P L T+N LI V + ++ L G +P+ FT+N++I ++ +
Sbjct: 1026 NRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKD 1085
Query: 343 DALDCLSEMVEWGVPPNTITY 363
A +M+ G PN T+
Sbjct: 1086 RAFSVFKKMMIVGCSPNAGTF 1106
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ G+ P T YN +I+ L KS ++ A F +M P+ +TYN LI G+
Sbjct: 989 LKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGM 1048
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD+A ++ ++++ +G PNV+TY LI G + F V + M PN T
Sbjct: 1049 VDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQ 1108
Query: 121 L 121
L
Sbjct: 1109 L 1109
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%)
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T N M++ L R ED M + + N TY + ++L G + ++ KM
Sbjct: 124 TCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKM 183
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ + Y++N LI + ++A K + M++ GL+P +YSAL+ AL +
Sbjct: 184 RQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDT 243
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
ME G P+ YT + + L + GR ++A+ I+KT ++ G
Sbjct: 244 GTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEG 292
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 230/527 (43%), Gaps = 45/527 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP T Y V+ + S +D AY ++M C+P+ Y LI + +A+
Sbjct: 415 ISPYT--YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
R++K+M+ G AP+++ Y LI G AKR+ E L M E + PN T + + G
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ A + + E L K++C L+ EA + R M D+G L ++
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + L +++ I +G+ P +Y +L+ K G + +
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++ L NV YNM++ FC+ +++A E+ EM + + PN VT+ T+I G+CK +
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL--------DCLSE------M 351
+ + L + G PD F + +++D CR + E A+ C S +
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNAL 772
Query: 352 VEWGVP------------------------PNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+ W PN +TYNI+I LC G++ + LF +MQ
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ P + T+ +L+ + +M + + F + G+ PD+ YS +I A +K G
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892
Query: 448 EA----KQTFL-SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+A Q F + +GC T +L + G E A +++
Sbjct: 893 KALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVME 939
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 126/524 (24%), Positives = 232/524 (44%), Gaps = 42/524 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+S Y+ +ID L+K + D A +M + Y+ I + + GV+++
Sbjct: 306 LGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEK 365
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L M G P Y LI+G+C K V + + +L MK+RN+ + T ++V
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ D A+ ++ + ++ TL+ NS +A +L++M ++G P
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + L ++E L ++ G+KP TY + +A D+Y+
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545
Query: 244 NH-----------------------------------VFKDRLVSNVNSYNMVIDCFCKV 268
+ ++ + +Y ++++ K
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+ +D A EI REMR + IAP++ ++ LI+G K + K + ++E G P+ +
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N ++ CR+ E A + L EM G+ PN +TY +I C GD+A + RLF +M+
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ PD + + L+ CR+N +E+A F G ++ALI + K G+ E
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERA-ITIFGTNKKGCASSTAPFNALINWVFKFGK-TE 783
Query: 449 AKQTFLSMEQNGC-----NPDSYTSNLILETLVQQGRFEEAHDI 487
K L+ +G P+ T N++++ L ++G E A ++
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKEL 827
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 222/507 (43%), Gaps = 27/507 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P + Y ++I+ + ++ Y +M +TY ++ G+C G +D A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+VK+M G PNV YT LI F R + RVL+ MKE+ + P+ SL+ G
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A L+ +E + S + A +++M + G LP
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 185 SSTFDYTVTCLVTGL--------DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
L TGL + E C + + +G+ TY +LM L+K +
Sbjct: 557 K--------VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
+ + + + +V SY ++I+ F K+ M +A+ I EM + + PN++ +N L
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ G C+ E+ K +ELL + G P+ T+ ++ID C++ +A EM G+
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLF---QKMQADRISPDIYTFNALIQSFCRMNKIEK 413
P++ Y L+ C + DV R++ +F +K A +P FNALI + K E
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP----FNALINWVFKFGKTEL 784
Query: 414 AEKAFFSMLTLGL----RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
+ ++ +P++ +Y+ +I L K G + AK+ F M+ P T
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGI 496
+L + GR E + + GI
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGI 871
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 133/522 (25%), Positives = 231/522 (44%), Gaps = 31/522 (5%)
Query: 2 SFLGISPSTRLY--NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
S +G+ RL ++DAL++ N +DL + ++ M D TY++LI CR G
Sbjct: 176 SSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAG 235
Query: 60 VV---------------------DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE 98
V D AL+L + M G P YTY +LIDG C KR+ +
Sbjct: 236 NVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLED 295
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
+L M V + T L+ G+ + + A L+ + + + + +
Sbjct: 296 AKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCIC 355
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
+S + +A A+ M G +P++ + + ++ + +L KR +
Sbjct: 356 VMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS----NVNSYNMVIDCFCKVNMMDRA 274
TY +++ + +G D++G ++ K+ + S NV Y +I F + + A
Sbjct: 416 SPYTYGTVVKGMCSSG-DLDGAY---NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ +EM+++ IAP++ +N+LI G K + + R LV ++E G KP+ FT+ + I
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
A F A + EM E GV PN + LI C G V + ++ M I D
Sbjct: 532 YIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGD 591
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
T+ L+ + +K++ AE+ F M G+ PD FSY LI K G +A F
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M + G P+ N++L + G E+A +++ +G+
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/511 (22%), Positives = 208/511 (40%), Gaps = 58/511 (11%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D + IL G ++EA+ + GL P + +L+D R+ + V
Sbjct: 150 DGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE------------PLTQKL 151
+ M ERNV + T L+ R + ++L + E+E L + +
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFK-TEKEFRTATLNVDGALKLKESM 268
Query: 152 VC----------NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
+C + L+ L +A ++L +M G ++ T+ + L+ G +
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328
Query: 202 NETCGIL-----------------------------------DTFIKRGVKPRFSTYLLL 226
+ G++ D I G+ P+ Y L
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+E + +G L + K +V + +Y V+ C +D A I +EM
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN+V + TLI +++ +L + E G PD F +NS+I L +A R ++A
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L EMVE G+ PN TY I + A + + ++M+ + P+ LI +C
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ K+ +A A+ SM+ G+ D +Y+ L+ L K+ + D+A++ F M G PD +
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ +++ + G ++A I E G++
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
++D L R +R + D MVE V + TY++LI + C G+V + K + +
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF 251
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ T N ++ A K SM+ GL P ++Y LI L K R ++AK
Sbjct: 252 RTA---TLN-----------VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAK 297
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ M+ G + D++T +L+++ L++ + A +V GI+ K +
Sbjct: 298 SLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPY 348
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 116/314 (36%), Gaps = 53/314 (16%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P+ Y +ID KS + A+ F +M + PD F Y L+ G CR+
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V+ A+ + + N ++ + A +
Sbjct: 748 VERAITI--------FGTN----------------------------KKGCASSTAPFNA 771
Query: 121 LVHGVFRCLDPHKAFELLIRFM----EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
L++ VF+ E+L R M +R + N ++ L A + +M
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Query: 177 GDRGYLPESSTFDYTVTCLVTGLD----LNETCGILDTFIKRGVKPRFSTYLLLMEALYK 232
+ +P T+ T L+ G D E + D I G++P Y +++ A K
Sbjct: 832 QNANLMPTVITY----TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Query: 233 AGRDVEGDRYLNHVFKDRLVSN-----VNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
G + ++ +F V + +++ ++ F KV M+ A ++ M
Sbjct: 888 EGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYI 947
Query: 288 PNLVTFNTLISGHC 301
P+ T LI+ C
Sbjct: 948 PDSATVIELINESC 961
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 230/527 (43%), Gaps = 45/527 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP T Y V+ + S +D AY ++M C+P+ Y LI + +A+
Sbjct: 415 ISPYT--YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
R++K+M+ G AP+++ Y LI G AKR+ E L M E + PN T + + G
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ A + + E L K++C L+ EA + R M D+G L ++
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + L +++ I +G+ P +Y +L+ K G + +
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++ L NV YNM++ FC+ +++A E+ EM + + PN VT+ T+I G+CK +
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL--------DCLSE------M 351
+ + L + G PD F + +++D CR + E A+ C S +
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNAL 772
Query: 352 VEWGVP------------------------PNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+ W PN +TYNI+I LC G++ + LF +MQ
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ P + T+ +L+ + +M + + F + G+ PD+ YS +I A +K G
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892
Query: 448 EA----KQTFL-SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+A Q F + +GC T +L + G E A +++
Sbjct: 893 KALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVME 939
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 126/524 (24%), Positives = 232/524 (44%), Gaps = 42/524 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+S Y+ +ID L+K + D A +M + Y+ I + + GV+++
Sbjct: 306 LGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEK 365
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L M G P Y LI+G+C K V + + +L MK+RN+ + T ++V
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ D A+ ++ + ++ TL+ NS +A +L++M ++G P
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + L ++E L ++ G+KP TY + +A D+Y+
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545
Query: 244 NH-----------------------------------VFKDRLVSNVNSYNMVIDCFCKV 268
+ ++ + +Y ++++ K
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+ +D A EI REMR + IAP++ ++ LI+G K + K + ++E G P+ +
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N ++ CR+ E A + L EM G+ PN +TY +I C GD+A + RLF +M+
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ PD + + L+ CR+N +E+A F G ++ALI + K G+ E
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERA-ITIFGTNKKGCASSTAPFNALINWVFKFGK-TE 783
Query: 449 AKQTFLSMEQNGC-----NPDSYTSNLILETLVQQGRFEEAHDI 487
K L+ +G P+ T N++++ L ++G E A ++
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKEL 827
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 222/507 (43%), Gaps = 27/507 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P + Y ++I+ + ++ Y +M +TY ++ G+C G +D A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+VK+M G PNV YT LI F R + RVL+ MKE+ + P+ SL+ G
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A L+ +E + S + A +++M + G LP
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 185 SSTFDYTVTCLVTGL--------DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
L TGL + E C + + +G+ TY +LM L+K +
Sbjct: 557 K--------VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
+ + + + +V SY ++I+ F K+ M +A+ I EM + + PN++ +N L
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ G C+ E+ K +ELL + G P+ T+ ++ID C++ +A EM G+
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLF---QKMQADRISPDIYTFNALIQSFCRMNKIEK 413
P++ Y L+ C + DV R++ +F +K A +P FNALI + K E
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP----FNALINWVFKFGKTEL 784
Query: 414 AEKAFFSMLTLGL----RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
+ ++ +P++ +Y+ +I L K G + AK+ F M+ P T
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGI 496
+L + GR E + + GI
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGI 871
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 133/522 (25%), Positives = 231/522 (44%), Gaps = 31/522 (5%)
Query: 2 SFLGISPSTRLY--NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
S +G+ RL ++DAL++ N +DL + ++ M D TY++LI CR G
Sbjct: 176 SSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAG 235
Query: 60 VV---------------------DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE 98
V D AL+L + M G P YTY +LIDG C KR+ +
Sbjct: 236 NVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLED 295
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
+L M V + T L+ G+ + + A L+ + + + + +
Sbjct: 296 AKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCIC 355
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
+S + +A A+ M G +P++ + + ++ + +L KR +
Sbjct: 356 VMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS----NVNSYNMVIDCFCKVNMMDRA 274
TY +++ + +G D++G ++ K+ + S NV Y +I F + + A
Sbjct: 416 SPYTYGTVVKGMCSSG-DLDGAY---NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ +EM+++ IAP++ +N+LI G K + + R LV ++E G KP+ FT+ + I
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
A F A + EM E GV PN + LI C G V + ++ M I D
Sbjct: 532 YIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGD 591
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
T+ L+ + +K++ AE+ F M G+ PD FSY LI K G +A F
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M + G P+ N++L + G E+A +++ +G+
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/511 (22%), Positives = 209/511 (40%), Gaps = 58/511 (11%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D + IL G G ++EA+ + GL P + +L+D R+ + V
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE------------PLTQKL 151
+ M ERNV + T L+ R + ++L + E+E L + +
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFK-TEKEFRTATLNVDGALKLKESM 268
Query: 152 VC----------NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
+C + L+ L +A ++L +M G ++ T+ + L+ G +
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328
Query: 202 NETCGIL-----------------------------------DTFIKRGVKPRFSTYLLL 226
+ G++ D I G+ P+ Y L
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+E + +G L + K +V + +Y V+ C +D A I +EM
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN+V + TLI +++ +L + E G PD F +NS+I L +A R ++A
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L EMVE G+ PN TY I + A + + ++M+ + P+ LI +C
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ K+ +A A+ SM+ G+ D +Y+ L+ L K+ + D+A++ F M G PD +
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ +++ + G ++A I E G++
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 173/414 (41%), Gaps = 45/414 (10%)
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLL-YRLSNNSMASEAAAILRKMGDRGYLPES 185
R DP K ++ QKL + L L N +A +++ +M +R + P +
Sbjct: 73 RVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNW-PVA 131
Query: 186 STFDYTVTC---LVTGLDLNETCGIL-DTFIKRG----------------VKPRFSTYLL 225
+ V C V D GIL D +I +G + PR S +
Sbjct: 132 EVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKV 191
Query: 226 LMEALYKAGR-DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM------------- 271
L++AL + R D+ D Y V ++ +V +V +Y+M+I C+ +
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERN-VVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE 250
Query: 272 --------DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
D A ++ M + + P T++ LI G CK + + LLV + G
Sbjct: 251 FRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSL 310
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D T++ +ID L + + A + EMV G+ Y+ I + G + ++ LF
Sbjct: 311 DNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF 370
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
M A + P + +LI+ +CR + + + M + ++Y ++K + S
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G D A M +GC P+ +++T +Q RF +A ++K KE+GI+
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
++D L R +R + D MVE V + TY++LI + C G+V + K + +
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF 251
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ T N ++ A K SM+ GL P ++Y LI L K R ++AK
Sbjct: 252 RTA---TLN-----------VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAK 297
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ M+ G + D++T +L+++ L++ + A +V GI+ K +
Sbjct: 298 SLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPY 348
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 116/314 (36%), Gaps = 53/314 (16%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P+ Y +ID KS + A+ F +M + PD F Y L+ G CR+
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V+ A+ + + N ++ + A +
Sbjct: 748 VERAITI--------FGTN----------------------------KKGCASSTAPFNA 771
Query: 121 LVHGVFRCLDPHKAFELLIRFM----EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
L++ VF+ E+L R M +R + N ++ L A + +M
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Query: 177 GDRGYLPESSTFDYTVTCLVTGLD----LNETCGILDTFIKRGVKPRFSTYLLLMEALYK 232
+ +P T+ T L+ G D E + D I G++P Y +++ A K
Sbjct: 832 QNANLMPTVITY----TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Query: 233 AGRDVEGDRYLNHVFKDRLVSN-----VNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
G + ++ +F V + +++ ++ F KV M+ A ++ M
Sbjct: 888 EGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYI 947
Query: 288 PNLVTFNTLISGHC 301
P+ T LI+ C
Sbjct: 948 PDSATVIELINESC 961
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 227/482 (47%), Gaps = 38/482 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P+ +Y+ ++A +++ A + + C D N+++ +C G VDEA
Sbjct: 141 GCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEA 200
Query: 65 LRLVKQM-EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+RL++ + G P+V +Y ++ G C A+R V ++E M PN T
Sbjct: 201 VRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTF----- 255
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+TL+ L N + + +M + G P
Sbjct: 256 ------------------------------STLIGHLCRNGLFERVHEVHAQMAEHGCAP 285
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ + + + L GIL+ G+ P Y L++ L A R E + L
Sbjct: 286 DVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLL 345
Query: 244 NHVF-KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+F KD + +V ++N+++D C+ ++DR E+ +M + P+++T+ T+I+G CK
Sbjct: 346 AEMFDKDCPLDDV-TFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCK 404
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + LL + CG +P+ ++ ++ LC A R+ DA + +S+M++ G PPN +T
Sbjct: 405 EGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVT 464
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+N LI LC G V +++ L ++M + SPD+ +++ +I + ++A + M+
Sbjct: 465 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMV 524
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G+ P+ YS++ AL GR ++ Q F +++ D+ N ++ +L ++G +
Sbjct: 525 KKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETD 584
Query: 483 EA 484
A
Sbjct: 585 RA 586
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 194/450 (43%), Gaps = 37/450 (8%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
YN ++ G CR G + + + APN YTY L+ C R+A+ VL+ M
Sbjct: 82 YNAMVAGYCRAG---QLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
R P + R A +L R CN +L + +
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
EA +LR + L +F G +P +Y ++
Sbjct: 199 EAVRLLRDL-------------------------------LPSF---GCEPDVVSYNAVL 224
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
L A R + + N+ +++ +I C+ + +R E+ +M + A
Sbjct: 225 RGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCA 284
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
P++ + T+I G CK+ + R +L + G P+ +N+++ LC A R+E+A
Sbjct: 285 PDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGL 344
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
L+EM + P + +T+NIL+ LC G V R + + ++M PD+ T+ +I FC+
Sbjct: 345 LAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCK 404
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
I++A SM G RP+ SY+ ++K L + R+ +A++ M Q GC P+ T
Sbjct: 405 EGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVT 464
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERGIS 497
N ++ L ++G E+A +++K G S
Sbjct: 465 FNTLINFLCKKGLVEQAIELLKQMLVNGCS 494
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ +N +I+ L K ++ A +QM V+ C PD +Y+ +I G+ + G DEA
Sbjct: 457 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEA 516
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+ M G +PN Y+ + R+ +V ++ E +++ V + +++
Sbjct: 517 LELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISS 576
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ + + +A E L + + + L+ L++ EA IL ++ +G L
Sbjct: 577 LCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKGAL 634
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/508 (25%), Positives = 237/508 (46%), Gaps = 30/508 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S Y +ID L KS +D A Q+M+ C P+ TY LI G+C+ +A
Sbjct: 5 GYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDA 64
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ VK+M G P++ TY LI G C A R+ + VL+ + PN T +LV
Sbjct: 65 IQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLV-- 122
Query: 125 VFRC----LDPHKAFELLIRFMEREPLTQKLVCNTLLY----------RLSNNSMASEAA 170
++ C LD R + RE + + VCN ++Y R ++
Sbjct: 123 IWNCRRRRLDQ-------ARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDG 175
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
+M + G +P+ T++ ++ L L++ +L+ + G+ P T+ ++ L
Sbjct: 176 ---DEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGL 232
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA--P 288
KA R + + + + V + +Y++++D + N +D E+ M+
Sbjct: 233 CKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVM 292
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+ T N I C+ + + +L+ ++E G P+ ++N +ID LC++ +DA
Sbjct: 293 EVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLS 352
Query: 349 SEMVEWG-VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS-PDIYTFNALIQSFC 406
+M++ G P+ I +N LI C G ++++ +L +M+A I PD+ T+N LI
Sbjct: 353 RKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQS 412
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ +++A+ M +G +P+ +Y+ALI K G ++EA+ F M GC PD
Sbjct: 413 KFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDII 472
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKER 494
T N +L + G +A + + K +
Sbjct: 473 TYNTVLSAFSKAGMMSKAEGVYQQLKNK 500
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 210/455 (46%), Gaps = 6/455 (1%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
TY LI G+C+ G +D A L+++M G APNV TYT LIDG C A+R + + ++ M
Sbjct: 12 TYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRM 71
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
P+ T SL+HG+ A +L + + +TL+
Sbjct: 72 LRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRL 131
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYL 224
+A ++R+M RG + + + C C D I+ G P TY
Sbjct: 132 DQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYN 191
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
+ L KAG+ +G L + + + +V ++ +I CK N +D A ++ + M +R
Sbjct: 192 TFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLER 251
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELL--VMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
P+ +T++ ++ + + E+L + ++ G + +T N+ I LCR+ +F
Sbjct: 252 GCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFP 311
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM-QADRISPDIYTFNAL 401
A + L M+E G PN ++YN +I LC G+V + +L +KM + PD+ FN L
Sbjct: 312 LAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTL 371
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGL-RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
I FC+ ++ +A + M + PD +Y+ LI K G +AK M+ G
Sbjct: 372 ISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVG 431
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
C P+ T ++ + G +EEA + +G
Sbjct: 432 CKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKG 466
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 190/435 (43%), Gaps = 48/435 (11%)
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M GY +V TYT LIDG C + + +L+ M + PN T +L+ G+ +
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
PH A + + R + + N+L++ L + +A +L+++ G+ P T+
Sbjct: 61 PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
V L++ G++ I RG Y
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVY--------------------------- 153
Query: 251 LVSNVNSYNMVIDC---FCKVNMMDRATEICR---EMRDRDIAPNLVTFNTLISGHCKDA 304
IDC FC+ E CR EM + P++VT+NT ISG CK
Sbjct: 154 -----------IDCIFGFCEARCQSSRYE-CRDGDEMIESGRIPDVVTYNTFISGLCKAG 201
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ K E+L + G PD TF S+I LC+A+R +DA M+E G P+++TY+
Sbjct: 202 KLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYS 261
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRIS--PDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
I++ +L + + + MQA + ++YT NA I + CR K A+ M+
Sbjct: 262 IMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMI 321
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC-NPDSYTSNLILETLVQQGRF 481
G P+ SY+ +I L KSG D+A + M +GC PD N ++ + GR
Sbjct: 322 ESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRL 381
Query: 482 EEAHDIVKTSKERGI 496
+AH ++ K + I
Sbjct: 382 SQAHQLLIEMKAKNI 396
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 194/425 (45%), Gaps = 7/425 (1%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
PD TYN I G+C+ G +D+ L ++++M+ G P+V T+ +I G C A R+ + F+V
Sbjct: 185 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQV 244
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELL--IRFMEREPLTQKLVCNTLLYRL 160
+ M ER P+ T ++ + R E+L ++ M+ + + N + L
Sbjct: 245 FKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGAL 304
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV-KPR 219
+ A IL M + G LP ++++ + L ++++ + + G KP
Sbjct: 305 CRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPD 364
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHV-FKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
+ L+ KAGR + + L + K+ V +V +YN +ID K + +A +
Sbjct: 365 VIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLL 424
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
+EM+ PN+VT+ LI+G+ K + L + G PD T+N+++ +A
Sbjct: 425 QEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKA 484
Query: 339 HRFEDALDCLSEMVEWG--VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
A ++ P+ ITY ILI C D + L L Q+M A S D Y
Sbjct: 485 GMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSY 544
Query: 397 TFNALIQSFCRMNKI-EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
T+N LI ++ KA + ML P +++L++ +++G + A+
Sbjct: 545 TYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQE 604
Query: 456 MEQNG 460
M + G
Sbjct: 605 MNEKG 609
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 151/325 (46%), Gaps = 7/325 (2%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+NA I AL +S LA M P+ +YN +I G+C+ G VD+A +L ++M
Sbjct: 297 HNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKML 356
Query: 73 GLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVHGVFRCLD 130
G P+V + LI GFC A R+++ ++L MK +N+C P+ T +L+ G +
Sbjct: 357 DSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSK-FG 415
Query: 131 PHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
K +LL++ M+ +V L+ + + M EA ++ +M +G P+ T++
Sbjct: 416 SLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYN 475
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRG--VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ +++ G+ + P TY +L++ +A +G L +
Sbjct: 476 TVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMT 535
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMM-DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ +YN++I + + +A + ++M D+D P+ FN+L+ + +V
Sbjct: 536 ARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDV 595
Query: 307 HKTRELLVMLLECGFKPDKFTFNSM 331
+ R ++ + E G D ++
Sbjct: 596 NSARSMVQEMNEKGHLVDASNLEAL 620
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 94/189 (49%), Gaps = 3/189 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P+ Y A+I+ K + A F +MS C PD TYN ++ + G++ +
Sbjct: 430 VGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSK 489
Query: 64 ALRLVKQMEG-LGY-APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
A + +Q++ Y +P+ TY ILIDG+C A+ + +L+ M R + T L
Sbjct: 490 AEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVL 549
Query: 122 VHGVFRCLD-PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + + P KA + + ++++ + + N+L+ + A +++++M ++G
Sbjct: 550 IAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKG 609
Query: 181 YLPESSTFD 189
+L ++S +
Sbjct: 610 HLVDASNLE 618
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 3/150 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMS--VDQCKPDRFTYNILIHGICRI 58
+S G P YN V+ A K+ + A +QQ+ C PD TY ILI G CR
Sbjct: 462 MSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRA 521
Query: 59 GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRV-AEVFRVLEIMKERNVCPNEAT 117
++ L L+++M G++ + YTY +LI + V ++ V + M +++ P+ +
Sbjct: 522 EDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASI 581
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPL 147
SLV R D + A ++ E+ L
Sbjct: 582 FNSLVRLFLRTGDVNSARSMVQEMNEKGHL 611
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%)
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M A+ + T+ LI C+ ++ A+ M G P+ +Y+ALI L K+ R
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+A QT M ++GC PD T N ++ L R ++A +++ G +
Sbjct: 61 PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFA 112
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 230/527 (43%), Gaps = 45/527 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP T Y V+ + S +D AY ++M C+P+ Y LI + +A+
Sbjct: 415 ISPYT--YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
R++K+M+ G AP+++ Y LI G AKR+ E L M E + PN T + + G
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ A + + E L K++C L+ EA + R M D+G L ++
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDA 592
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + L +++ I +G+ P +Y +L+ K G + +
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++ L NV YNM++ FC+ +++A E+ EM + + PN VT+ T+I G+CK +
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL--------DCLSE------M 351
+ + L + G PD F + +++D CR + E A+ C S +
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNAL 772
Query: 352 VEWGVP------------------------PNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+ W PN +TYNI+I LC G++ + LF +MQ
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ P + T+ +L+ + +M + + F + G+ PD+ YS +I A +K G
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892
Query: 448 EA----KQTFL-SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+A Q F + +GC T +L + G E A +++
Sbjct: 893 KALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVME 939
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 129/524 (24%), Positives = 236/524 (45%), Gaps = 42/524 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+S Y+ +ID L+K + D A +M + Y+ I + + GV+++
Sbjct: 306 LGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEK 365
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L M G P Y LI+G+C K V + + +L MK+RN+ + T ++V
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ D A+ ++ + ++ TL+ NS +A +L++M ++G P
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + L ++E L ++ G+KP TY + +A D+Y+
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545
Query: 244 ----------NHVF----------KDRLV---------------SNVNSYNMVIDCFCKV 268
N V K++++ + +Y ++++ K
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+ +D A EI REMR + IAP++ ++ LI+G K + K + ++E G P+ +
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N ++ CR+ E A + L EM G+ PN +TY +I C GD+A + RLF +M+
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ PD + + L+ CR+N +E+A F G ++ALI + K G+ E
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERA-ITIFGTNKKGCASSTAPFNALINWVFKFGK-TE 783
Query: 449 AKQTFLSMEQNGC-----NPDSYTSNLILETLVQQGRFEEAHDI 487
K L+ +G P+ T N++++ L ++G E A ++
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKEL 827
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 122/499 (24%), Positives = 219/499 (43%), Gaps = 11/499 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P + Y ++I+ + ++ Y +M +TY ++ G+C G +D A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+VK+M G PNV YT LI F R + RVL+ MKE+ + P+ SL+ G
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A L+ +E + S + A +++M + G LP
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + E C + + +G+ TY +LM L+K + + +
Sbjct: 557 KVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +V SY ++I+ F K+ M +A+ I EM + + PN++ +N L+ G C+
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E+ K +ELL + G P+ T+ ++ID C++ +A EM G+ P++ Y
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736
Query: 365 ILIRSLCAIGDVARSLRLF---QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
L+ C + DV R++ +F +K A +P FNALI + K E + +
Sbjct: 737 TLVDGCCRLNDVERAITIFGTNKKGCASSTAP----FNALINWVFKFGKTELKTEVLNRL 792
Query: 422 LTLGL----RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
+ +P++ +Y+ +I L K G + AK+ F M+ P T +L +
Sbjct: 793 MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDK 852
Query: 478 QGRFEEAHDIVKTSKERGI 496
GR E + + GI
Sbjct: 853 MGRRAEMFPVFDEAIAAGI 871
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 131/558 (23%), Positives = 234/558 (41%), Gaps = 58/558 (10%)
Query: 2 SFLGISPSTRLY--NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
S +G+ RL ++DAL++ N +DL + ++ M D TY++LI CR G
Sbjct: 176 SSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAG 235
Query: 60 VV---------------------DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE 98
V D AL+L + M G P YTY +LIDG C KR+ +
Sbjct: 236 NVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLED 295
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
+L M V + T L+ G+ + + A L+ + + + + +
Sbjct: 296 AKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCIC 355
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTF------------------------------ 188
+S + +A A+ M G +P++ +
Sbjct: 356 VMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415
Query: 189 -DYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
YT +V G+ DL+ I+ I G +P Y L++ + R + R L
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + ++ YN +I K MD A EM + + PN T+ ISG+ +
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+E + + + ECG P+K +I+ C+ + +A MV+ G+ + TY
Sbjct: 536 SEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTY 595
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+L+ L V + +F++M+ I+PD++++ LI F ++ ++KA F M+
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL P+ Y+ L+ +SG ++AK+ M G +P++ T I++ + G E
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE 715
Query: 484 AHDIVKTSKERGISFKSF 501
A + K +G+ SF
Sbjct: 716 AFRLFDEMKLKGLVPDSF 733
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/511 (22%), Positives = 209/511 (40%), Gaps = 58/511 (11%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D + IL G G ++EA+ + GL P + +L+D R+ + V
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE------------PLTQKL 151
+ M ERNV + T L+ R + ++L + E+E L + +
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFK-TEKEFRTATLNVDGALKLKESM 268
Query: 152 VC----------NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
+C + L+ L +A ++L +M G ++ T+ + L+ G +
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328
Query: 202 NETCGIL-----------------------------------DTFIKRGVKPRFSTYLLL 226
+ G++ D I G+ P+ Y L
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+E + +G L + K +V + +Y V+ C +D A I +EM
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN+V + TLI +++ +L + E G PD F +NS+I L +A R ++A
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L EMVE G+ PN TY I + A + + ++M+ + P+ LI +C
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ K+ +A A+ SM+ G+ D +Y+ L+ L K+ + D+A++ F M G PD +
Sbjct: 569 KKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ +++ + G ++A I E G++
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 173/414 (41%), Gaps = 45/414 (10%)
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLL-YRLSNNSMASEAAAILRKMGDRGYLPES 185
R DP K ++ QKL + L L N +A +++ +M +R + P +
Sbjct: 73 RVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNW-PVA 131
Query: 186 STFDYTVTC---LVTGLDLNETCGIL-DTFIKRG----------------VKPRFSTYLL 225
+ V C V D GIL D +I +G + PR S +
Sbjct: 132 EVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKV 191
Query: 226 LMEALYKAGR-DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM------------- 271
L++AL + R D+ D Y V ++ +V +V +Y+M+I C+ +
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERN-VVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE 250
Query: 272 --------DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
D A ++ M + + P T++ LI G CK + + LLV + G
Sbjct: 251 FRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSL 310
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D T++ +ID L + + A + EMV G+ Y+ I + G + ++ LF
Sbjct: 311 DNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF 370
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
M A + P + +LI+ +CR + + + M + ++Y ++K + S
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G D A M +GC P+ +++T +Q RF +A ++K KE+GI+
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 116/314 (36%), Gaps = 53/314 (16%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P+ Y +ID KS + A+ F +M + PD F Y L+ G CR+
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V+ A+ + + N ++ + A +
Sbjct: 748 VERAITI--------FGTN----------------------------KKGCASSTAPFNA 771
Query: 121 LVHGVFRCLDPHKAFELLIRFM----EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
L++ VF+ E+L R M +R + N ++ L A + +M
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Query: 177 GDRGYLPESSTFDYTVTCLVTGLD----LNETCGILDTFIKRGVKPRFSTYLLLMEALYK 232
+ +P T+ T L+ G D E + D I G++P Y +++ A K
Sbjct: 832 QNANLMPTVITY----TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Query: 233 AGRDVEGDRYLNHVFKDRLVSN-----VNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
G + ++ +F V + +++ ++ F KV M+ A ++ M
Sbjct: 888 EGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYI 947
Query: 288 PNLVTFNTLISGHC 301
P+ T LI+ C
Sbjct: 948 PDSATVIELINESC 961
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/487 (27%), Positives = 221/487 (45%), Gaps = 6/487 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP YNA++D KS A ++M P TYN LI R G++DEA
Sbjct: 321 GFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEA 380
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV-- 122
+ L QM G P+V+TYT L+ GF + +V E M+ PN T +L+
Sbjct: 381 MELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKM 440
Query: 123 HG-VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
HG ++ K FE I+ E P + NTLL N M SE + + ++M G+
Sbjct: 441 HGNRGNFVEMMKVFEE-IKICECVP--DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 497
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+PE TF+ ++ ++ I + GV P STY ++ AL + G + ++
Sbjct: 498 VPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEK 557
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + R N +Y ++ + ++R + + E+ I P V TL+ +
Sbjct: 558 VLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYS 617
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + +T + L E GF PD T N+M+ R + L+ + + G P+
Sbjct: 618 KSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLT 677
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN L+ +S + +++ A + PDI +FN +I ++CR ++++A + F M
Sbjct: 678 TYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEM 737
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
GL PD +Y+ I + F EA M +N C P+ T N +++ + R
Sbjct: 738 KDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRR 797
Query: 482 EEAHDIV 488
+EA+ +
Sbjct: 798 DEANSFI 804
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 129/564 (22%), Positives = 229/564 (40%), Gaps = 87/564 (15%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV-VDE 63
G+ Y ++I A + A + F+++ + C+P TYN++++ ++G+ +
Sbjct: 215 GVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSK 274
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
LV M+ G AP++YTY LI E V E MK P++ T +L+
Sbjct: 275 IAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLD 334
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ P +A E+L + ME +V N+L+ + + + EA + +M +G
Sbjct: 335 VYGKSRRPREAMEVL-KEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIK 393
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIK-------RGVKPRFSTYLLLMEALYKAGR 235
P+ +T T L++G E G D +K G +P T+ L++ G
Sbjct: 394 PDV----FTYTTLLSGF---EKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGN 446
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
VE + + V ++ ++N ++ F + M + + +EM+ P TFNT
Sbjct: 447 FVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNT 506
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
LIS + + + + +L+ G PD T+N+++ L R +E + L+EM +
Sbjct: 507 LISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGR 566
Query: 356 VPPNTITYNILIRSLCAIGDVAR-----------------------------------SL 380
PN +TY L+ + +V R +
Sbjct: 567 CKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETE 626
Query: 381 RLFQKMQADRISPDIYTFNALIQ-----------------------------------SF 405
R F +++ SPDI T NA++ +
Sbjct: 627 RAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMY 686
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
R EK+E ++ G++PD S++ +I A ++GR EA + F M+ G PD
Sbjct: 687 SRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDV 746
Query: 466 YTSNLILETLVQQGRFEEAHDIVK 489
T N + + F EA D+VK
Sbjct: 747 ITYNTFIASYASDSMFIEAIDVVK 770
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 160/340 (47%), Gaps = 1/340 (0%)
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCL-VTGLDLNETCGILDTFIK 213
+L+ ++N EA + +K+ + G P T++ + G+ ++ G++D+
Sbjct: 225 SLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKS 284
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
GV P TY L+ + + E + + +YN ++D + K
Sbjct: 285 SGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPRE 344
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A E+ +EM AP++VT+N+LIS + +D + + EL +++ G KPD FT+ +++
Sbjct: 345 AMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLS 404
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
+ + + A+ EM G PN T+N LI+ G+ +++F++++ P
Sbjct: 405 GFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVP 464
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
DI T+N L+ F + + F M G P+ +++ LI A + G FD+A +
Sbjct: 465 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIY 524
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
M G PD T N +L L + G +E++ ++ K+
Sbjct: 525 RRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKD 564
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 134/282 (47%), Gaps = 1/282 (0%)
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM-MDR 273
GV Y L+ A GR E + ++ + +YN++++ + K+ M +
Sbjct: 215 GVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSK 274
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
+ M+ +AP+L T+NTLIS + + + E+ + GF PDK T+N+++D
Sbjct: 275 IAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLD 334
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
++ R +A++ L EM G P+ +TYN LI + G + ++ L +M I P
Sbjct: 335 VYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKP 394
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
D++T+ L+ F + K + A K F M G +P+ +++ALIK G F E + F
Sbjct: 395 DVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVF 454
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
++ C PD T N +L Q G E + K K G
Sbjct: 455 EEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 496
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/488 (21%), Positives = 203/488 (41%), Gaps = 44/488 (9%)
Query: 50 ILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE---VFRVLE-- 104
++I + + G A L+ + G ++Y YT LI + + R E VF+ LE
Sbjct: 190 VIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEE 249
Query: 105 -------------------------------IMKERNVCPNEATVRSLVHGVFRCLDPHK 133
MK V P+ T +L+ R +
Sbjct: 250 GCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEE 309
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A E+ K+ N LL + EA +L++M G+ P T++ ++
Sbjct: 310 AAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLIS 369
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
L+E + +K+G+KP TY L+ K G+ D Y VF++ V+
Sbjct: 370 AYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGK----DDYAMKVFEEMRVA 425
Query: 254 ----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
N+ ++N +I ++ E++ + P++VT+NTL++ ++ +
Sbjct: 426 GCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEV 485
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+ + GF P++ TFN++I R F+ A+ M++ GV P+ TYN ++ +
Sbjct: 486 SGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAA 545
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
L G +S ++ +M+ R P+ T+ +L+ ++ ++E+ + + + P
Sbjct: 546 LARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQ 605
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
L+ KS E ++ FL + + G +PD T N ++ ++ + ++I+
Sbjct: 606 AVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILN 665
Query: 490 TSKERGIS 497
K+ G +
Sbjct: 666 FIKDSGFT 673
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 128/264 (48%), Gaps = 1/264 (0%)
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
S +++ L K GR L+ + D + ++ +Y +I + A + ++
Sbjct: 186 SVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKK 245
Query: 281 MRDRDIAPNLVTFNTLISGHCK-DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
+ + P L+T+N +++ + K K L+ + G PD +T+N++I R
Sbjct: 246 LEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGS 305
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+E+A + EM G P+ +TYN L+ ++ + ++M+A +P I T+N
Sbjct: 306 LYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYN 365
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
+LI ++ R +++A + M+ G++PD F+Y+ L+ K+G+ D A + F M
Sbjct: 366 SLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVA 425
Query: 460 GCNPDSYTSNLILETLVQQGRFEE 483
GC P+ T N +++ +G F E
Sbjct: 426 GCQPNICTFNALIKMHGNRGNFVE 449
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 118/282 (41%), Gaps = 2/282 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P YNAV+ AL + + + +M +CKP+ TY L+H V+
Sbjct: 531 GVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERM 590
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +++ P L+ + + + E R ++E+ P+ T+ ++V
Sbjct: 591 SALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSI 650
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
R K E+L F++ T L N+L+Y S ++ ILR++ +G P
Sbjct: 651 YGRRRMVSKTNEIL-NFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKP 709
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ +F+ + + E I G+ P TY + + +E +
Sbjct: 710 DIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVV 769
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
++ K+ N N+YN +ID FCK+N D A +R+ D
Sbjct: 770 KYMIKNECKPNQNTYNSLIDWFCKLNRRDEANSFISNLRNLD 811
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 200/409 (48%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ I S +N +I+ L K + A M KP+ TYN +IHG C G
Sbjct: 210 MNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQR 269
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + + M+ G P+ YTY I G C R+ E ++ M E + PN T +L+
Sbjct: 270 ARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALID 329
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G D KA+ + + + + N ++ L +A ++++M ++G +P
Sbjct: 330 GYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMP 389
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ T + + D G+LD + +G++P TY L+ L K R E D
Sbjct: 390 DAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALF 449
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + ++ L+ ++ +N +ID C +DRA ++ +EM + + P+ +T+NTL+ G+C++
Sbjct: 450 SKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCRE 509
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V + R+LL + G KPD ++N++I + +DA EM+ G P +TY
Sbjct: 510 GKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTY 569
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
N LI+ LC + + L ++M + I+PD T+ ++I++ ++ +E
Sbjct: 570 NALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 210/471 (44%), Gaps = 35/471 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ N ++ +K N +A++ + +M + +T+NI+I+ +C+ G + +A
Sbjct: 176 GFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKA 235
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ME LG PNV TY +I G C + + + MK++ + P+ T S + G
Sbjct: 236 KEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISG 295
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
L EA+ ++ KM + G +P
Sbjct: 296 -----------------------------------LCKEGRLEEASGLICKMLEGGLVPN 320
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + DL++ D I +G+ TY L + AL+ GR + D +
Sbjct: 321 AVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIK 380
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++ + ++N++I+ +C+ RA + EM + I P LVT+ +LI K
Sbjct: 381 EMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRN 440
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L + + G PD FN++ID C + A L EM V P+ ITYN
Sbjct: 441 RMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYN 500
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L++ C G V + +L +M+ I PD ++N LI + + ++ A + M+T
Sbjct: 501 TLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTT 560
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G P +Y+ALI+ L K+ + A++ M G PD T I+E +
Sbjct: 561 GFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 219/451 (48%), Gaps = 2/451 (0%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
+++L+ C + +EAL ++ G+ PN+ T ++ F R + + M
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMA 166
N+ + T +++ + + KA E I ME + +V NT+++
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEF-IGHMETLGVKPNVVTYNTIIHGHCLRGKF 267
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
A I + M D+G P+ T++ ++ L L E G++ ++ G+ P TY L
Sbjct: 268 QRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNAL 327
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ G + Y + + +++++ +YN+ I M A + +EMR++ +
Sbjct: 328 IDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGM 387
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P+ VT N LI+G+C+ + + LL ++ G +P T+ S+I L + +R ++A
Sbjct: 388 MPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADA 447
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
S++ + G+ P+ I +N LI CA G++ R+ +L ++M ++ PD T+N L+Q +C
Sbjct: 448 LFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYC 507
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R K+E+A + M G++PD+ SY+ LI K G +A + M G +P
Sbjct: 508 REGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTIL 567
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T N +++ L + E A +++K +GI+
Sbjct: 568 TYNALIQGLCKNQEGEHAEELLKEMVSKGIT 598
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 227/487 (46%), Gaps = 15/487 (3%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ YN +I+ ++ DL F ++ PD F+YN LI G + G VD+A
Sbjct: 115 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 174
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L +ME G PNV TY+ LI+G C K + + RVL M V PN T L+HG +
Sbjct: 175 LFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHG-Y 233
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLV-CNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
K + + M L + CN+ + L + EA I M +G P+
Sbjct: 234 STSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDV 293
Query: 186 STFD-----YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
++ Y + G+D + + + GV P + L+ A + G +
Sbjct: 294 ISYGALLHGYATAGCIAGMD-----NLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSL 348
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ K + ++ +++ VI FC++ +D A E M D + P+ ++ LI G
Sbjct: 349 LMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQ 408
Query: 301 CKDAEVHKTRELLVMLLECGFKPD--KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
C ++ K +EL+ +L G P KF F S+I+ LC+ R + D + ++ G P
Sbjct: 409 CNRRDLVKAKELISDMLSKGIPPPCIKF-FTSIINNLCKEGRVAEGKDVVDLIIHTGQRP 467
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N IT+N L+ C +G++ ++ L M++ + PDIYT+N L+ +C+ +I+ A F
Sbjct: 468 NLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLF 527
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
ML + + SY+ ++ L ++ R AK+ F M ++G +T +L L +
Sbjct: 528 RDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRN 587
Query: 479 GRFEEAH 485
+EA+
Sbjct: 588 NCTDEAN 594
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 226/474 (47%), Gaps = 4/474 (0%)
Query: 28 LAYLKFQQM---SVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYT 84
LA F++M + + P +TYNILI+ R D L + ++ G P+V++Y
Sbjct: 98 LAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYN 157
Query: 85 ILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMER 144
LIDGF V + + M+E+ + PN T SL++G+ + + KA +L + +
Sbjct: 158 ALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGA 217
Query: 145 EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNET 204
+ N L++ S + M E+ + ++M +P+ + +T L + E
Sbjct: 218 GVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEA 277
Query: 205 CGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
I D+ + +G KP +Y L+ AG D N + + +V + + +N +I+
Sbjct: 278 RDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINA 337
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
+ ++ MMD++ + +M + + P+++TF+T+IS C+ + E +++ G PD
Sbjct: 338 YARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPD 397
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT-YNILIRSLCAIGDVARSLRLF 383
++ +I C A + +S+M+ G+PP I + +I +LC G VA +
Sbjct: 398 TAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVV 457
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+ P++ TFN+L+ +C + +++A SM ++G+ PD ++Y+ L+ K
Sbjct: 458 DLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKH 517
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
GR D+A F M S + N+IL L Q R A ++ E G++
Sbjct: 518 GRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMA 571
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 134/564 (23%), Positives = 241/564 (42%), Gaps = 73/564 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YNA+ID K +D A+ F +M P+ TY+ LI+G+C+ +D+A
Sbjct: 148 GLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKA 207
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGF---------------------------------- 90
R+++QM G G PN TY LI G+
Sbjct: 208 ERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTA 267
Query: 91 -CNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT- 148
C R+ E + + M + P+ + +L+HG + + L M E +
Sbjct: 268 LCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHG-YATAGCIAGMDNLFNVMVCEGVVP 326
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT--------------- 193
+ V NTL+ + M ++ + M +G P+ TF ++
Sbjct: 327 DRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKF 386
Query: 194 ----------------CLVTGL----DLNETCGILDTFIKRGVKPR-FSTYLLLMEALYK 232
CL+ G DL + ++ + +G+ P + ++ L K
Sbjct: 387 NHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCK 446
Query: 233 AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
GR EG ++ + N+ ++N ++D +C V M A + M + P++ T
Sbjct: 447 EGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYT 506
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+NTL+ G+CK + L +L ++N ++ L +A R A + EM+
Sbjct: 507 YNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMI 566
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
E G+ + TY ++ LC + L +K+ + + DI TFN +I++ ++ + +
Sbjct: 567 ESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQ 626
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
+A++ F ++ T GL P +Y +I LIK F++A F SME++ C PDS N I+
Sbjct: 627 EAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEII 686
Query: 473 ETLVQQGRFEEAHDIVKTSKERGI 496
L+ +G +A + + ++GI
Sbjct: 687 RMLLNKGEVAKAGNYLSKIDKKGI 710
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/483 (21%), Positives = 206/483 (42%), Gaps = 42/483 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y A++ + I F M + PDR +N LI+ R+G++D++
Sbjct: 288 GPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKS 347
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + + M G P++ T++ +I FC R+ + M + V P+ A L+ G
Sbjct: 348 LLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQG 407
Query: 125 VFRCLDPHKAFELLIRFMER--EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
D KA EL+ + + P K +++ L +E ++ + G
Sbjct: 408 QCNRRDLVKAKELISDMLSKGIPPPCIKFF-TSIINNLCKEGRVAEGKDVVDLIIHTGQR 466
Query: 183 PESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P TF+ V CLV ++ E G+LD+ GV+P
Sbjct: 467 PNLITFNSLVDGYCLVG--NMKEAVGLLDSMESVGVEP---------------------- 502
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
++ +YN ++D +CK +D A + R+M + + V++N ++ G
Sbjct: 503 -------------DIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGL 549
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ +E+ ++E G T+ +++ LCR + ++A L ++ V +
Sbjct: 550 FQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDI 609
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+T+NI+IR++ +G + LF + + P I T+ +I + + E A+ F S
Sbjct: 610 LTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSS 669
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M PD+ + +I+ L+ G +A +++ G P++ T++L++ G+
Sbjct: 670 MEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGK 729
Query: 481 FEE 483
+ E
Sbjct: 730 YRE 732
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 94/229 (41%), Gaps = 10/229 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P YN ++D K ID A F+ M + +YNI++HG+ +
Sbjct: 498 VGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIV 557
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + +M G A +++TY ++ G C E +LE + NV + T ++
Sbjct: 558 AKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIR 617
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE-----AAAILRKMGD 178
+F+ +A EL T LV L YR+ ++ E A + M
Sbjct: 618 AMFKVGRRQEAKELFAAIS-----TYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEK 672
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
P+S + + L+ ++ + L K+G+ P +T LL+
Sbjct: 673 SSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 721
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 72/169 (42%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++ S Y V+ L ++N D A + +++ K D T+NI+I + ++G EA
Sbjct: 569 GMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEA 628
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + G P + TY ++I + + + M++ + P+ + ++
Sbjct: 629 KELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRM 688
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAIL 173
+ + KA L + ++ L + + L+Y S N E +L
Sbjct: 689 LLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLL 737
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS G+ P+ Y +I L+K S + A F M C PD N +I + G
Sbjct: 635 ISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGE 694
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
V +A + +++ G P T ++LI F + E ++L
Sbjct: 695 VAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLL 737
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/471 (26%), Positives = 213/471 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ YN ++D+ K + A QM C P+ TYN+L++G+ G +++A
Sbjct: 197 GICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQA 256
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ M LG +VYTY LI G+C ++ E R+ E M R P T ++++G
Sbjct: 257 KELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYG 316
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A +LL + + + + NTL+Y + EA + ++ R P
Sbjct: 317 LCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPS 376
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L DL+ + D IK G P T+ + K G +
Sbjct: 377 VVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFD 436
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L + +Y I K+ +A + EM R P+L+T+N I G K
Sbjct: 437 EMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLG 496
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + EL+ +L G PD T+ S+I A A EM+ G+ P+ +TY
Sbjct: 497 NLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYT 556
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI S G + ++ F +M + P++ T+NALI C++ K+++A F M
Sbjct: 557 VLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAK 616
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G+ P+ ++Y+ LI G + EA + + M PDS T +L+ L
Sbjct: 617 GISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHL 667
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/495 (25%), Positives = 219/495 (44%), Gaps = 8/495 (1%)
Query: 8 PSTRLYNAVIDAL----VKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGIC-RIGVVD 62
PS +L ++D L VK + ++ L F +M PD N ++ + R +D
Sbjct: 128 PSVKL---ILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNID 184
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A + M G P V TY ++D FC V E ++L M+ PN+ T LV
Sbjct: 185 VAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLV 244
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G+ + +A EL+ + + L+ EA+ + +M RG +
Sbjct: 245 NGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAV 304
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T++ + L +++ +LD + + + P +Y L+ + G E
Sbjct: 305 PTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLL 364
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ L +V +YN +ID C++ +D A + EM P++ TF T + G CK
Sbjct: 365 FAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCK 424
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ +EL +L G +PD+F + + I + A EM+ G PP+ IT
Sbjct: 425 MGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLIT 484
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN+ I L +G++ + L +KM + + PD T+ ++I + + KA F ML
Sbjct: 485 YNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEML 544
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ G+ P +Y+ LI + GR A F M + G +P+ T N ++ L + + +
Sbjct: 545 SKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMD 604
Query: 483 EAHDIVKTSKERGIS 497
+A++ + +GIS
Sbjct: 605 QAYNFFAEMQAKGIS 619
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 160/341 (46%), Gaps = 8/341 (2%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P YN +I + +I A+L F ++ P TYN LI G+CR+G +D A+
Sbjct: 338 LMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAM 397
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
RL +M G P+V+T+T + GFC + + + M R + P+ + + G
Sbjct: 398 RLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGE 457
Query: 126 FRCLDPHKAF----ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ DP KAF E+L R + +T + + L ++L N EA+ +++KM G
Sbjct: 458 LKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGL-HKLGN---LKEASELVKKMLYNGL 513
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P+ T+ + + L + + + +G+ P TY +L+ + GR
Sbjct: 514 VPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAIL 573
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + + + NV +YN +I+ CKV MD+A EM+ + I+PN T+ LI+ +C
Sbjct: 574 HFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENC 633
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+ L +L+ +PD T S++ L + ++
Sbjct: 634 NLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLH 674
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/459 (28%), Positives = 225/459 (49%), Gaps = 19/459 (4%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
TY +++ G+C G+ ++AL LV+++ G+ Y P ++ Y +I G C A RV + ++VLE M
Sbjct: 56 TYKLVVDGLCGAGMANQALELVRELSGV-YTPTLFIYNGIITGLCRASRVMDAYKVLEKM 114
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
E ++ PN T L++G+ R A E+ + TL+ LS
Sbjct: 115 VEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEI 174
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFST 222
EA LR M ++ L E T T T +V GL L++ ++ + GV+P T
Sbjct: 175 DEA---LRVMIEQRSL-ELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVT 230
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN----VNSYNMVIDCFCKVNMMDRATEIC 278
Y L+ + G E DR + +++ +Y +D CK +DRA +
Sbjct: 231 YSNLVHGFRQHG---ELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSV 287
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
E+R + P++VT++ LI+ + + + ELL + G KPD T++++I+ LC+
Sbjct: 288 EELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKE 347
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+F+DA L M G PPN +TYN ++ LC G + R+++ M R SPD+ T+
Sbjct: 348 RKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTY 407
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+ ++ + ++ A K F + + PD +YS +I +L ++G+ +EA + ME
Sbjct: 408 SIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEV 467
Query: 459 N--GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G N + L+ L R + A IV+ + ERG
Sbjct: 468 TVAGDNICRALAGLV-AALCDAERTDSARRIVEVASERG 505
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 185/412 (44%), Gaps = 35/412 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ Y +++ L +SN LA FQ+M + CKP+ TY LI + R G +DEAL
Sbjct: 119 IVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEAL 178
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
R++ + L +V T T ++ G C A R+ + + +E M++ V PNE T +LVHG
Sbjct: 179 RVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHG- 237
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
FR H + +IRF E E + + EAAA GYL
Sbjct: 238 FR---QHGELDRVIRFFEEEK--------------ARKGGSLEAAAY------PGYLDAL 274
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
Y L+ ++ + GV P TY +L+ +AG+ L
Sbjct: 275 CKAGY----------LDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLED 324
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++ + +V +Y+ +I+ CK A + M PN+VT+N+++ G CK +
Sbjct: 325 MRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGK 384
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + + M+L+ PD T++ +++ L +A + A+ + P+ Y++
Sbjct: 385 MDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSM 444
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDI-YTFNALIQSFCRMNKIEKAEK 416
+I SLC G + + ++ M+ +I L+ + C + + A +
Sbjct: 445 VITSLCRAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAERTDSARR 496
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 152/323 (47%), Gaps = 37/323 (11%)
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+ ++ GVK + LL L++ + E R + +V +Y +V+D C
Sbjct: 9 SVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAG 68
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
M ++A E+ RE+ P L +N +I+G C+ + V ++L ++E P+ FT+
Sbjct: 69 MANQALELVRELSGV-YTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYT 127
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+++ LCR+++ + A + EM G PN ITY LI+ L G++ +LR+ + ++
Sbjct: 128 ILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSL 187
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK----------- 438
+ D+ T ++ C+ ++++ A K M +G+RP+ +YS L+
Sbjct: 188 ELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRV 247
Query: 439 -------------------------ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
AL K+G D A+++ + Q+G PD T ++++
Sbjct: 248 IRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLIN 307
Query: 474 TLVQQGRFEEAHDIVKTSKERGI 496
T + G+F+ + ++++ + G+
Sbjct: 308 TFARAGQFDASLELLEDMRRNGV 330
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 196/402 (48%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ I S +N +I+ L + A M V KP+ TYN +I+G C G +
Sbjct: 211 MNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEA 270
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ K M+ P+ YTY I C +R+ E VL + E + PN T +L+
Sbjct: 271 ASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALID 330
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G D KAF M R + N L++ L EA ++++M ++G P
Sbjct: 331 GCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEP 390
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + + + + D +++ ++P TY L++ K R E +
Sbjct: 391 DVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKF 450
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
K+ ++ ++ +N +ID C +DRA ++ +EM + + P+ VTFNTL+ G+C++
Sbjct: 451 KKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRE 510
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V + ++LL + E G KPD ++N++I + +DAL+ EM+ G P +TY
Sbjct: 511 RKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTY 570
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
N LI+ IG+ + L ++MQ+ I+PD T+ +I++
Sbjct: 571 NALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM 612
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 205/415 (49%)
Query: 26 IDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTI 85
I +A+ +++M K T+NI+I+ +CR G +A + ME G PNV TY
Sbjct: 198 IKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNT 257
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
+I+G+C + ++ + MK++N+ P+ T S + + + +A +L + +E
Sbjct: 258 VINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESG 317
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
+ + N L+ N +A A +M +RG + T++ + L + E
Sbjct: 318 LVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAE 377
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
++ ++GV+P TY + + + G + + + + + V +Y +ID F
Sbjct: 378 DMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVF 437
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
K N M A E ++ + P+++ FN LI GHC + + + +LL + PD+
Sbjct: 438 GKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDE 497
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
TFN+++ CR + E+A L EM E G+ P+ I+YN LI GD+ +L +F +
Sbjct: 498 VTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDE 557
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
M + P + T+NALIQ + ++ + + AE+ M + G+ PD+ +Y +I+A+
Sbjct: 558 MLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM 612
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 220/453 (48%), Gaps = 2/453 (0%)
Query: 46 FTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEI 105
+++L+ C+ DEAL + M+ P T L+ ++ + V E
Sbjct: 148 LVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEE 207
Query: 106 MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNS 164
M + N+ + T +++ + R KA + I ME + +V NT++
Sbjct: 208 MVKMNIKSSIVTFNIMINILCREGKWKKAKDF-IGHMEVYGVKPNVVTYNTVINGYCLRG 266
Query: 165 MASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYL 224
A+ I + M D+ P+ T++ ++ L + E G+L ++ G+ P TY
Sbjct: 267 KFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYN 326
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
L++ G + Y + + +V++V +YN++I ++ A ++ +EMR++
Sbjct: 327 ALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREK 386
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
+ P++VT+N I+G+C+ K L ++E +P T+ S+ID + +R +A
Sbjct: 387 GVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEA 446
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
+ + ++ G+ P+ I +N LI C G++ R+ +L ++M ++ PD TFN L+Q
Sbjct: 447 EEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQG 506
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+CR K+E+A+K M G++PD+ SY+ LI K G +A + F M G +P
Sbjct: 507 YCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPT 566
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T N +++ + G + A ++++ + +GI+
Sbjct: 567 LLTYNALIQGYSKIGEADHAEELLREMQSKGIT 599
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 187/419 (44%), Gaps = 35/419 (8%)
Query: 113 PNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAI 172
P+ ++ + P F L R + LV + LL EA
Sbjct: 110 PSPKPSFHILQPILHTTTPTVIFNELSLARNRLNVKTTLVFDLLLSAYCQFRKPDEALEC 169
Query: 173 LRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK 232
L M + +P++ T + ++ L+ + + + +K +K T+ +++ L +
Sbjct: 170 LNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCR 229
Query: 233 AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
G+ + ++ H+ + NV +YN VI+ +C + A++I + M+D+++ P+ T
Sbjct: 230 EGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYT 289
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA-------------- 338
+N+ IS CK+ + + +L LLE G P+ T+N++ID C
Sbjct: 290 YNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMM 349
Query: 339 ---------------------HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
R E+A D + EM E GV P+ +TYNI I C G+
Sbjct: 350 NRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAK 409
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
++L LF +M I P + T+ +LI F + N++ +AE+ F + G+ PD ++ALI
Sbjct: 410 KALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALI 469
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+G D A Q M+ PD T N +++ ++ + EEA ++ KERGI
Sbjct: 470 DGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGI 528
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 99/236 (41%), Gaps = 35/236 (14%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
I P+ Y ++ID K N + A KF++ + PD +N LI G C G +D A
Sbjct: 422 NIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRA 481
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L+K+M+ P+ T+ L+ G+C ++V E ++L+ MKER + P+ + +L+ G
Sbjct: 482 FQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISG 541
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D A E+ + L N L+ S A A +LR+M +G
Sbjct: 542 YSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKG---- 597
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ P STYL ++EA+ VE D
Sbjct: 598 -------------------------------ITPDDSTYLYVIEAMKTNDDLVEND 622
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 224/493 (45%), Gaps = 1/493 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+ + Y+++I +LVK + +Y ++M C PD F +N ++ G R +++A
Sbjct: 6 IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAR 65
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ + M GY P+ +Y ILI G ++ E ++L M R P+ SLV +
Sbjct: 66 EVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL 125
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ A L + +L+ L+ L +A+ ++M G P
Sbjct: 126 AKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNV 185
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
++ + L + L + + P TY L++A+ KA R EG +
Sbjct: 186 PVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEA 245
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ V NV +++ +I C+ +++A E+ M + PN T+ TLISG C+ +
Sbjct: 246 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEK 305
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW-GVPPNTITYN 364
V + REL + + PD +NS+I C+ ++A EM G+ P +T+N
Sbjct: 306 VIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFN 365
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C +G + R+ L +M ++ D T+ LI R K+++A + + M
Sbjct: 366 TLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREK 425
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
D S + + L K+G D+A F + ++G P+ T ++ E+L++ GR E+A
Sbjct: 426 KFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDA 485
Query: 485 HDIVKTSKERGIS 497
+++ +K R I+
Sbjct: 486 QKLMEPAKARDIT 498
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 207/448 (46%), Gaps = 1/448 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P +N V+ +SN+++ A +Q M KPD +Y+ILIHG+ +IG +DE+
Sbjct: 40 GCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDES 99
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+++ +M G P++ Y+ L+ A+RV + + M P+ L+ G
Sbjct: 100 LKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILG 159
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A E + + V N LL+ L ++ +A + +M P+
Sbjct: 160 LCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPD 219
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + + E C + + G P T+ L+ L + G +
Sbjct: 220 VVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFG 279
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N +Y +I C+ + +A E+ +M I P+ V +N+LI+G+CK
Sbjct: 280 SMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRG 339
Query: 305 EVHKTRELL-VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + +L M G +P TFN++ID C+ + A + ++EM G+ ++ TY
Sbjct: 340 SMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTY 399
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
ILI L + +L ++++M+ + D + + + C+ I++A F +
Sbjct: 400 RILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRK 459
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQ 451
G P+ ++ L ++LIK GR ++A++
Sbjct: 460 SGAVPNPETFRILSESLIKLGRVEDAQK 487
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 117/217 (53%)
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
MRD++IA N+ T++++I K+A+ ++ ++L ++ G PD F FN ++ R++
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
E A + MVE G P+ ++Y+ILI L IG + SL++ +M +P + +++
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
L+++ + +++ A F M+ G PD + LI L ++G+ +A + F M ++G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
C P+ N++L L G+ E+A+ + K S
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCS 217
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/524 (24%), Positives = 230/524 (43%), Gaps = 27/524 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP T +N +I AL S+ +D A F +M CKP+ FT+ IL+ G C+ G+ D+
Sbjct: 142 GISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+ ME G PN Y ++ FC R + +++E M+E + P+ T S +
Sbjct: 202 LELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISA 261
Query: 125 V---FRCLDPHKAF-ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + LD + F ++ + P + N +L + +A + + +
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
L +++ + LV E +L I +G+ P +Y +LM+ L K G +
Sbjct: 322 DLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAK 381
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + ++ + + +Y ++ +C V +D A + +EM + PN T N L+
Sbjct: 382 TIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL 441
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM--------- 351
+ + ELL + E G+ D T N ++D LC + + A++ + M
Sbjct: 442 WNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALG 501
Query: 352 --------------VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
+E P+ ITY+ L+ LC G A + LF +M +++ PD
Sbjct: 502 NLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLA 561
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+N I FC+ KI A + M G +Y++LI L + E M
Sbjct: 562 YNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMR 621
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ G +P+ T N ++ L + G+ E+A +++ ++ I+ F
Sbjct: 622 EKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVF 665
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/518 (23%), Positives = 235/518 (45%), Gaps = 29/518 (5%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P LYN ++++ ++ ++ ++ M + P+ +T+N+LI +C VD A L
Sbjct: 110 PGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAAREL 169
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+M G PN +T+ IL+ G+C A + +L M+ V PN+ ++V R
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCR 229
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL---- 182
+ E L+ M E L +V N+ + L +A+ I M YL
Sbjct: 230 -EGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P S T++ + L + + ++ + +Y + ++ L + G+ +E +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETV 348
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + + ++ SYN+++D CK+ M+ A I M+ ++P+ VT+ L+ G+C
Sbjct: 349 LKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCS 408
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+V + LL ++ P+ +T N ++ L R +A + L +M E G +T+T
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRIS-----------------------PDIYTFN 399
NI++ LC G++ +++ + + M+ + PD+ T++
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYS 528
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
L+ C+ + +A+ F M+ L+PD+ +Y+ I K G+ A + ME+
Sbjct: 529 TLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKK 588
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
GC+ T N ++ L + + E H ++ +E+GIS
Sbjct: 589 GCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGIS 626
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 136/554 (24%), Positives = 235/554 (42%), Gaps = 69/554 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQC----KPDRFTYNILIHGICRIGV 60
G+ P +N+ I AL K + A F M +D+ +P+ TYN+++ G C++G+
Sbjct: 247 GLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGL 306
Query: 61 VD-----------------------------------EALRLVKQMEGLGYAPNVYTYTI 85
++ EA ++KQM G P++Y+Y I
Sbjct: 307 LEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNI 366
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
L+DG C +++ ++ +MK V P+ T L+HG A LL M
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
L CN LL+ L N SEA +LRKM ++GY ++ T + V L +L++
Sbjct: 427 CLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486
Query: 206 GIL-----------------------DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
I+ D+ I+ P TY L+ L KAGR E
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTL 546
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ ++L + +YN+ I FCK + A + ++M + +L T+N+LI G
Sbjct: 547 FAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ + L+ + E G P+ T+N+ I LC + EDA + L EM++ + PN +
Sbjct: 607 KNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFS 666
Query: 363 YNILIRSLCAIGDVARSLRLFQ-KMQADRISPDIYT--FNALIQSFCRMNKIEKAEKAFF 419
+ LI + C + D + +F+ + +Y+ FN L+ + ++ KA +
Sbjct: 667 FKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAA----GQLLKATELLE 722
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
++L G F Y L+ +L K + A M G D +++ L + G
Sbjct: 723 AVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMG 782
Query: 480 RFEEAHDIVKTSKE 493
+EA++ + E
Sbjct: 783 NKKEANNFAEKMME 796
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 212/499 (42%), Gaps = 64/499 (12%)
Query: 15 AVIDALVKSNSIDLAYLKFQ--QMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+V+ KSN ID A+ +FQ + + KP + YN+L+ R V+ L K M
Sbjct: 80 SVVSIFAKSNHIDKAFPQFQFVRSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMV 139
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G +P YT+ +LI C++ V + + M E+ PNE T LV G +
Sbjct: 140 LCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTD 199
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
K ELL L K+V NT++ ++ ++ KM + G +P+ TF+ +
Sbjct: 200 KGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRI 259
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+ AL K G+ ++ R + + D +
Sbjct: 260 S-----------------------------------ALCKEGKVLDASRIFSDMELDEYL 284
Query: 253 S----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
N +YN+++ FCKV +++ A + +R+ D +L ++N + G + + +
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIE 344
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+L +++ G P +++N ++D LC+ DA + M GV P+ +TY L+
Sbjct: 345 AETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLH 404
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
C++G V + L Q+M + P+ YT N L+ S M +I +AE+ M G
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGL 464
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSME-----------------------QNGCNPDS 465
D + + ++ L SG D+A + M +N C PD
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDL 524
Query: 466 YTSNLILETLVQQGRFEEA 484
T + +L L + GRF EA
Sbjct: 525 ITYSTLLNGLCKAGRFAEA 543
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%)
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
KP + +N +++ R R E +MV G+ P T T+N+LIR+LC V +
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARE 168
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
LF +M P+ +TF L++ +C+ +K + SM + G+ P+ Y+ ++ +
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFC 228
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+ GR D++++ M + G PD T N + L ++G+ +A I
Sbjct: 229 REGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRI 274
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 225/494 (45%), Gaps = 17/494 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ---CKPDRFTYNILIHGICR 57
+S LG P+ Y+ V+ AL NS+ L QM Q C PD Y+ +IHG
Sbjct: 219 MSELGCVPNAVSYSIVLKALC-DNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFN 277
Query: 58 IGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
G +A L +M G P+V TY ++ID C A+ + + VL M P+ T
Sbjct: 278 EGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVT 337
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV-CNTLLYRLSNNSMASEAAAILRKM 176
++HG + L K + R M++ L +V CN+ L L + + EAA M
Sbjct: 338 YSCMIHG-YATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSM 396
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETC-----GILDTFIKRGVKPRFSTYLLLMEALY 231
+G+ P+ F Y C + +E C G+ ++ G+ + +L+ A
Sbjct: 397 TAKGHKPD--IFSY---CTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYA 451
Query: 232 KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
K G + + + + +V +Y+ VI F ++ + A E +M R I PN
Sbjct: 452 KRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTA 511
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGF-KPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
++++I G C + K +EL+ ++ G +PD F+S+I+ LC+ R DA D
Sbjct: 512 VYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDL 571
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
+ G P IT+N LI C +G + ++ ++ M+ + PDI T+N L+ + + +
Sbjct: 572 ATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGR 631
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
I F M G++P+ +Y ++ L ++GR A++ F M ++G +
Sbjct: 632 INDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGI 691
Query: 471 ILETLVQQGRFEEA 484
IL L + +EA
Sbjct: 692 ILGGLCRNNCADEA 705
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/522 (24%), Positives = 231/522 (44%), Gaps = 44/522 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN +IDAL K+ ++D A L +QM+ D +PD TY+ +IHG +G + EA
Sbjct: 295 GVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEA 354
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ ++M+ G PN+ T + C R E + M + P+ + +L+HG
Sbjct: 355 AKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHG 414
Query: 125 VFRCLDPHKAFELLIRF---MEREPLTQKL-VCNTLLYRLSNNSMASEAAAILRKMGDRG 180
F +I M+ + V L++ + M +A I +M +G
Sbjct: 415 ----YASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQG 470
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T+ ++ L + + + RG++P + Y +++ G V+
Sbjct: 471 VSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAK 530
Query: 241 R--------------------YLNHVFKDRLVSNVN----------------SYNMVIDC 264
+N + KD V + + ++N +ID
Sbjct: 531 ELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDG 590
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
+C V MD+A +I M + P++VT+NTL+ G+ K+ ++ L + G KP+
Sbjct: 591 YCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPN 650
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
T+ M+ L RA R A EM+E G Y I++ LC ++ LFQ
Sbjct: 651 TVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQ 710
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
K+ + I N +I + ++ + E+A++ F ++ GL P+ +Y +I L+K G
Sbjct: 711 KLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDG 770
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
++A F SME++G P S N I+ L+++G +A +
Sbjct: 771 GVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGN 812
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/495 (24%), Positives = 234/495 (47%), Gaps = 14/495 (2%)
Query: 14 NAVIDALVKSNSIDLAY-LKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM- 71
N ++ L +N + A + +MS C P+ +Y+I++ +C + AL L++ M
Sbjct: 196 NTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMA 255
Query: 72 -EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
+G +P+V Y+ +I GF N + + M + V P+ T ++ + +
Sbjct: 256 KQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARA 315
Query: 131 PHKAFELLIRFMER---EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
KA EL++R M +P T C +++ + EAA + R+M RG +P T
Sbjct: 316 MDKA-ELVLRQMTTDGAQPDTVTYSC--MIHGYATLGRLKEAAKMFREMKKRGLIPNIVT 372
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + L E D+ +G KP +Y L+ G + N +
Sbjct: 373 CNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMK 432
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ + +N + + ++I + K M+D A I EM+ + ++P++VT++T+IS + +
Sbjct: 433 SNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLT 492
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP-PNTITYNIL 366
E ++ G +P+ ++S+I C A + +SEM+ G+P P+ + ++ +
Sbjct: 493 DAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSV 552
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I SLC G V + +F P + TFN+LI +C + K++KA K +M +G+
Sbjct: 553 INSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGV 612
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA-- 484
PD +Y+ L+ K+GR ++ F M++ G P++ T ++L L + GR A
Sbjct: 613 EPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARK 672
Query: 485 --HDIVKTSKERGIS 497
H+++++ +S
Sbjct: 673 KFHEMIESGTTVTVS 687
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 206/446 (46%), Gaps = 10/446 (2%)
Query: 66 RLVKQMEGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R+ ++ G A P TY IL+D C A+R + + + ++ T +L+
Sbjct: 142 RVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKC 201
Query: 125 VFRCLDPHKAFELLI-RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL- 182
+ +A +L+ R E + + + +L L +NSM+ A +L+ M +G
Sbjct: 202 LCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGAC 261
Query: 183 -PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P+ + + + + C + ++GVKP TY L+++AL KA + +
Sbjct: 262 SPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAEL 321
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + D + +Y+ +I + + + A ++ REM+ R + PN+VT N+ ++ C
Sbjct: 322 VLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLC 381
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + E + G KPD F++ +++ F D + + M G+ N
Sbjct: 382 KHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCH 441
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
+ ILI + G V ++ +F +MQ +SPD+ T++ +I +F RM ++ A + F M
Sbjct: 442 VFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQM 501
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC-NPDSYTSNLILETLVQQGR 480
+ G++P+ YS++I+ G +AK+ M G PD + ++ +L + GR
Sbjct: 502 VARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGR 561
Query: 481 FEEAHDIVKTSKERG-----ISFKSF 501
+AHDI + + G I+F S
Sbjct: 562 VMDAHDIFDLATDIGERPGVITFNSL 587
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 186/413 (45%), Gaps = 7/413 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ + ++ +I A K +D A L F +M PD TY+ +I R+G + +A
Sbjct: 435 GIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDA 494
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVH 123
+ QM G PN Y+ +I GFC + + ++ M + + P+ S+++
Sbjct: 495 MEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVIN 554
Query: 124 GV---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ R +D H F+L ER + + N+L+ +A IL M G
Sbjct: 555 SLCKDGRVMDAHDIFDLATDIGERPGV---ITFNSLIDGYCLVGKMDKAFKILDAMEVVG 611
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T++ + +N+ + ++GVKP TY +++ L++AGR V
Sbjct: 612 VEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAAR 671
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + + V+ Y +++ C+ N D A + +++ ++ ++ NT+I+
Sbjct: 672 KKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAM 731
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K + +EL + G P++ T+ MI L + EDA + S M + G+ P +
Sbjct: 732 YKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGS 791
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
N +IR L G++A++ K+ RI + T + ++ F R K ++
Sbjct: 792 RLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQE 844
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 102/264 (38%), Gaps = 35/264 (13%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P YN ++D K+ I+ F++M KP+ TY I++ G+ R G
Sbjct: 610 VGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVA 669
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + +M G V Y I++ G C RN C +EA +
Sbjct: 670 ARKKFHEMIESGTTVTVSIYGIILGGLC-----------------RNNCADEAII----- 707
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
F+ L + +T + NT++ + EA + + G LP
Sbjct: 708 ----------LFQKLGTMNVKFSIT---ILNTMINAMYKVQRKEEAKELFATISASGLLP 754
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
ST+ + L+ + + + + K G+ P ++ L + G + YL
Sbjct: 755 NESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYL 814
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCK 267
+ V R++ ++ ++++ F +
Sbjct: 815 SKVDGKRILLEASTTSLMLSLFSR 838
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 222/493 (45%), Gaps = 1/493 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ-CKPDRFTYNILIHGICRIGVVDE 63
G+ P Y V + A Q+M D+ KPD TY +LI G C++G ++E
Sbjct: 250 GLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEE 309
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
ALRL + + G+ NV Y++L+ C +V E ++L M+ N+ P+ T L+H
Sbjct: 310 ALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIH 369
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +A +L + +L L M S+A + P
Sbjct: 370 GLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRP 429
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ + ++ + V D+ E + + + P T+ L+ K + VE R L
Sbjct: 430 DVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLL 489
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ L + +Y +++ +C+ +++ E+ EM +DI P +VT+ +I G CK
Sbjct: 490 ESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQ 549
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ ++ +LL + G PD+ T+N++I C C+A A + L +M+ + P TY
Sbjct: 550 RKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATY 609
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+LI LC GDV + R+ +Q I+ + +I++ C ++A K F M+
Sbjct: 610 NVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVE 669
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G YSA+I L K +EAK F M +G +PD ++L + G
Sbjct: 670 KGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHS 729
Query: 484 AHDIVKTSKERGI 496
+++ + G+
Sbjct: 730 VFELLAVMIKFGL 742
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 190/425 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G + LY+ ++ +L K +D A +M + +PD TY+ILIHG+C+ G V +A
Sbjct: 321 GFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQA 380
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L K+M PN + ++ ++ G C +++ + + N+ P+ ++ G
Sbjct: 381 IQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDG 440
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D +A L R ++ + N+L+Y N EA +L + G P
Sbjct: 441 YVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPS 500
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T+ + ++N+ +L + ++P TY ++++ L K + E + L
Sbjct: 501 AVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLE 560
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L + +YN +I CFCK M +A E+ +M ++ P T+N LI G C+
Sbjct: 561 DMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYG 620
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V +LV L + K + +MI C + A+ +MVE G + Y+
Sbjct: 621 DVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYS 680
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I LC + + F M +D +SPD F ++ +F R + + M+
Sbjct: 681 AVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKF 740
Query: 425 GLRPD 429
GL D
Sbjct: 741 GLLHD 745
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/498 (21%), Positives = 220/498 (44%), Gaps = 7/498 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S R + ++D L + A L +Q + P ++N ++ C++G+ D A
Sbjct: 145 GTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVA 204
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
M G P+ Y+Y ILI G A + E + M+++ + P+ T + + G
Sbjct: 205 KSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKG 264
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY----RLSNNSMASEAAAILRKMGDRG 180
A E++ + + E L LV T+L ++ N EA + R + G
Sbjct: 265 FHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGN---IEEALRLRRDLLSSG 321
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ + ++ L ++E +L ++P TY +L+ L K G+ +
Sbjct: 322 FQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAI 381
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + +R+ N +++ ++ C+ M+ A + ++ P++ +N +I G+
Sbjct: 382 QLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGY 441
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K +V + L L + P TFNS+I C+ + +A L + G+ P+
Sbjct: 442 VKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSA 501
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TY L+ + C G++ + L +M I P + T+ +I+ C+ K+E++ +
Sbjct: 502 VTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLED 561
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M GL PD +Y+ +I+ K+ +A + M + P T N++++ L + G
Sbjct: 562 MRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGD 621
Query: 481 FEEAHDIVKTSKERGISF 498
E+A ++ + ++R I+
Sbjct: 622 VEDADRVLVSLQDRNINL 639
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 113/242 (46%), Gaps = 14/242 (5%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I G+ PS Y +++A + +I+ + +M++ +P TY ++I G+C+
Sbjct: 492 IKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRK 551
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
++E+++L++ M G AP+ TY +I FC AK + + F +L+ M N+ P AT
Sbjct: 552 LEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNV 611
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G+ R D A +L+ +R K+ T++ A A + +M ++G
Sbjct: 612 LIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKG 671
Query: 181 YLPESSTFDYTVT-------CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
+ E S DY+ CL+ NE + GV P + +++ A ++A
Sbjct: 672 F--EVSIKDYSAVINRLCKRCLI-----NEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRA 724
Query: 234 GR 235
G
Sbjct: 725 GH 726
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 90/185 (48%), Gaps = 5/185 (2%)
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL-DCLSEMVEWGVPPNTITYN 364
VH +LV + E +P T+NS++ L R D + D +++ + G P + T +
Sbjct: 99 VHDALFVLVKMKEQNLRPSIQTYNSLLYNL----RHTDIMWDVYNDIKDSGTPQSARTSS 154
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I++ LC ++ ++ +P + +FN ++ +C++ + A+ F ML
Sbjct: 155 IIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKY 214
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ PD +SY+ LI LI +G +EA + ME+ G PD T ++ + G A
Sbjct: 215 GILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGA 274
Query: 485 HDIVK 489
+I++
Sbjct: 275 REIIQ 279
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 215/459 (46%), Gaps = 2/459 (0%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGY--APNVYTYTILIDGFCNAKRVAE 98
C PD F+Y+IL+ +C G +A L++ M G +P+V YT +ID F V +
Sbjct: 182 CVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNK 241
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
+ + M +R + P+ T S+VH + + KA L + + + L N L+Y
Sbjct: 242 ACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIY 301
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
S+ EA + ++M LP+ T + + L + E + DT +G P
Sbjct: 302 GYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNP 361
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
+Y +++ G V+ + + D + ++ +++++I + M+D+A I
Sbjct: 362 DVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIF 421
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
EMRD + P++VT+ T+I+ C+ ++ E +++ G PDK+ ++ +I C
Sbjct: 422 NEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTH 481
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
A + + E++ G+ + + ++ +I +LC +G + + +F PD +
Sbjct: 482 GSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVY 541
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+ L+ +C + K+EKA + F +M++ G+ P+ Y L+ K GR DE F M Q
Sbjct: 542 SMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQ 601
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G P + N+I++ L GR A E GI+
Sbjct: 602 KGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIA 640
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 117/478 (24%), Positives = 214/478 (44%), Gaps = 35/478 (7%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP Y VID K ++ A F++M PD TY+ ++H +C+ + +A
Sbjct: 220 SPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEA 279
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++QM G P+ +TY LI G+ + + E RV + M+ ++ P+ T+
Sbjct: 280 FLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL-------- 331
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
N L+ L EA + M +G P+
Sbjct: 332 ---------------------------NMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 364
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
++ + T L + + D + G+ P T+ +L++A G + N +
Sbjct: 365 SYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEM 424
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ +V +Y VI C++ MD A E +M D+ +AP+ ++ LI G C +
Sbjct: 425 RDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL 484
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
K +EL++ ++ G + D F+S+I+ LC+ R DA + V G P+ + Y++L
Sbjct: 485 LKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSML 544
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ C +G + ++LR+F M + I P++ + L+ +C++ +I++ F ML G+
Sbjct: 545 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 604
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+P Y+ +I L +GR AK F M ++G + T N++L + F+EA
Sbjct: 605 KPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEA 662
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 194/447 (43%), Gaps = 36/447 (8%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P TY IL+ R + AL Q+ G ++ L+ GFC AKR E +
Sbjct: 113 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 172
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
L L R E + + LL L +
Sbjct: 173 L----------------------------------LHRTPELGCVPDVFSYSILLKSLCD 198
Query: 163 NSMASEAAAILRKMGDRGYL--PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
+ +A +LR M + G + P+ + + C D+N+ C + ++RG+ P
Sbjct: 199 QGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDL 258
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY ++ AL KA + + +L + ++ + +YN +I + A + +E
Sbjct: 259 VTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKE 318
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
MR I P++VT N L+ CK ++ + R++ + G PD F++ M++
Sbjct: 319 MRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGC 378
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
D D M+ G+ P+ T+++LI++ G + +++ +F +M+ + PD+ T+
Sbjct: 379 LVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTT 438
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
+I + CR+ K++ A + F M+ G+ PD ++Y LI+ G +AK+ L + NG
Sbjct: 439 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNG 498
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDI 487
D + I+ L + GR +A +I
Sbjct: 499 MRLDIVFFSSIINNLCKLGRIMDAQNI 525
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/463 (22%), Positives = 216/463 (46%), Gaps = 8/463 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P Y++V+ AL K+ ++ A +QM PD +TYN LI+G G EA
Sbjct: 253 GIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEA 312
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+R+ K+M P+V T +L+ C ++ E V + M + P+ + + +++G
Sbjct: 313 VRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNG 372
Query: 125 VFR--CL-DPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRG 180
CL D F+L++ + + + ++L + +N M +A I +M D G
Sbjct: 373 YATKGCLVDMTDLFDLMLG----DGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHG 428
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T+ + L +++ + I +GV P Y L++ G ++
Sbjct: 429 VKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAK 488
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + + ++ ++ +I+ CK+ + A I + P+ V ++ L+ G+
Sbjct: 489 ELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGY 548
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C ++ K + ++ G +P+ + ++++ C+ R ++ L EM++ G+ P+T
Sbjct: 549 CLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPST 608
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
I YNI+I L G + F +M I+ + T+N +++ F + ++A F
Sbjct: 609 ILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKE 668
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ + ++ D + + +I + ++ R +EAK F S+ ++G P
Sbjct: 669 LRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 711
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 154/322 (47%), Gaps = 41/322 (12%)
Query: 208 LDTFIKR----GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV--SNVNSYNMV 261
LD + R G P +Y +L+++L G+ + D L + + V +V +Y V
Sbjct: 170 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTV 229
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
IDCF K +++A ++ +EM R I P+LVT+++++ CK + K L ++ G
Sbjct: 230 IDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGV 289
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV--ARS 379
PD +T+N++I ++++A+ EM + P+ +T N+L+ SLC G + AR
Sbjct: 290 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARD 349
Query: 380 L---------------------------------RLFQKMQADRISPDIYTFNALIQSFC 406
+ LF M D I+PDIYTF+ LI+++
Sbjct: 350 VFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYA 409
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
++KA F M G++PD +Y+ +I AL + G+ D+A + F M G PD Y
Sbjct: 410 NCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 469
Query: 467 TSNLILETLVQQGRFEEAHDIV 488
+ +++ G +A +++
Sbjct: 470 AYHCLIQGFCTHGSLLKAKELI 491
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 142/321 (44%), Gaps = 38/321 (11%)
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL---------------------- 251
R + P TY +LM+ +A R + + + L
Sbjct: 109 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 168
Query: 252 --------------VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI--APNLVTFNT 295
V +V SY++++ C +A ++ R M + +P++V + T
Sbjct: 169 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTT 228
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
+I K+ +V+K +L +++ G PD T++S++ LC+A A L +MV G
Sbjct: 229 VIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKG 288
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
V P+ TYN LI + G ++R+F++M+ I PD+ T N L+ S C+ KI++A
Sbjct: 289 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEAR 348
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
F +M G PD FSY ++ G + F M +G PD YT +++++
Sbjct: 349 DVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAY 408
Query: 476 VQQGRFEEAHDIVKTSKERGI 496
G ++A I ++ G+
Sbjct: 409 ANCGMLDKAMIIFNEMRDHGV 429
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 143/364 (39%), Gaps = 47/364 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P ++ +I A +D A + F +M KPD TY +I +CRIG +D+A
Sbjct: 393 GIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDA 452
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ QM G AP+ Y Y LI GFC HG
Sbjct: 453 MEKFNQMIDQGVAPDKYAYHCLIQGFCT------------------------------HG 482
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
KA EL++ M + ++++ L +A I + G P+
Sbjct: 483 SLL-----KAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPD 537
Query: 185 SSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+ + + CLV ++ + + D + G++P Y L+ K GR EG
Sbjct: 538 AVVYSMLMDGYCLVGKME--KALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSL 595
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG--- 299
+ + + + YN++ID A EM + IA N T+N ++ G
Sbjct: 596 FREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFK 655
Query: 300 -HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
C D + +EL M K D T N+MI + + R E+A D + + G+ P
Sbjct: 656 NRCFDEAIFLFKELRAM----NVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 711
Query: 359 NTIT 362
+T
Sbjct: 712 CVVT 715
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSL--------CAIGD---VARSLRLFQKMQA 388
R EDA D L E+ G P N + +L C G VA R + Q
Sbjct: 48 RPEDAHDLLDELQRRGTPVLGRDLNGFLAALARAPSSAACGSGPALAVALFNRAASRAQG 107
Query: 389 DRI-SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
R+ SP +T+ L+ R ++ E A F +L GLR D + L+K ++ R D
Sbjct: 108 PRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTD 167
Query: 448 EAKQTFLS-MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
EA L + GC PD ++ +++L++L QG+ +A D+++ E G
Sbjct: 168 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGG 216
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI PST LYN +ID L + A +KF +M+ ++ TYNI++ G + DEA
Sbjct: 603 GIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEA 662
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
+ L K++ + ++ T +I G +RV E + + + P TV
Sbjct: 663 IFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTV 716
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 227/487 (46%), Gaps = 15/487 (3%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ YN +I+ ++ DL F ++ PD F+YN LI G + G VD+A
Sbjct: 186 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 245
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L +ME G PNV TY+ LI+G C K + + RVL M V PN T L+HG +
Sbjct: 246 LFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHG-Y 304
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLV-CNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
K + + M L + CN+ + L + EA I M +G P+
Sbjct: 305 STSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDV 364
Query: 186 STFD-----YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
++ Y + G+D + + + GV P + L+ A + G +
Sbjct: 365 ISYGALLHGYATAGCIAGMD-----NLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSL 419
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ K + ++ +++ VI FC++ +D A E M D + P+ ++ LI G
Sbjct: 420 LMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQ 479
Query: 301 CKDAEVHKTRELLVMLLECGFKPD--KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
C ++ K +EL+ +L G P KF F S+I+ LC+ R + D + ++ G P
Sbjct: 480 CNRRDLVKAKELISDMLSKGIPPPCIKF-FTSIINNLCKEGRVAEGKDVVDLIIHTGQRP 538
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N IT+N L+ C +G++ ++ L M++ + PDIYT+N L+ +C+ +I+ A F
Sbjct: 539 NLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLF 598
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
ML + + SY+ ++ L ++ R AK+ F M ++G +T +L L +
Sbjct: 599 RDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRN 658
Query: 479 GRFEEAH 485
+EA+
Sbjct: 659 NCTDEAN 665
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 226/474 (47%), Gaps = 4/474 (0%)
Query: 28 LAYLKFQQM---SVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYT 84
LA F++M + + P +TYNILI+ R D L + ++ G P+V++Y
Sbjct: 169 LAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYN 228
Query: 85 ILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMER 144
LIDGF V + + M+E+ + PN T SL++G+ + + KA +L + +
Sbjct: 229 ALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGA 288
Query: 145 EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNET 204
+ N L++ S + M E+ + ++M +P+ + +T L + E
Sbjct: 289 GVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEA 348
Query: 205 CGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
I D+ + +G KP +Y L+ AG D N + + +V + + +N +I+
Sbjct: 349 RDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINA 408
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
+ ++ MMD++ + +M + + P+++TF+T+IS C+ + E +++ G PD
Sbjct: 409 YARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPD 468
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT-YNILIRSLCAIGDVARSLRLF 383
++ +I C A + +S+M+ G+PP I + +I +LC G VA +
Sbjct: 469 TAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVV 528
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+ P++ TFN+L+ +C + +++A SM ++G+ PD ++Y+ L+ K
Sbjct: 529 DLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKH 588
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
GR D+A F M S + N+IL L Q R A ++ E G++
Sbjct: 589 GRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMA 642
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 134/564 (23%), Positives = 241/564 (42%), Gaps = 73/564 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YNA+ID K +D A+ F +M P+ TY+ LI+G+C+ +D+A
Sbjct: 219 GLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKA 278
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGF---------------------------------- 90
R+++QM G G PN TY LI G+
Sbjct: 279 ERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTA 338
Query: 91 -CNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT- 148
C R+ E + + M + P+ + +L+HG + + L M E +
Sbjct: 339 LCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHG-YATAGCIAGMDNLFNVMVCEGVVP 397
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT--------------- 193
+ V NTL+ + M ++ + M +G P+ TF ++
Sbjct: 398 DRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKF 457
Query: 194 ----------------CLVTGL----DLNETCGILDTFIKRGVKPR-FSTYLLLMEALYK 232
CL+ G DL + ++ + +G+ P + ++ L K
Sbjct: 458 NHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCK 517
Query: 233 AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
GR EG ++ + N+ ++N ++D +C V M A + M + P++ T
Sbjct: 518 EGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYT 577
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+NTL+ G+CK + L +L ++N ++ L +A R A + EM+
Sbjct: 578 YNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMI 637
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
E G+ + TY ++ LC + L +K+ + + DI TFN +I++ ++ + +
Sbjct: 638 ESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQ 697
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
+A++ F ++ T GL P +Y +I LIK F++A F SME++ C PDS N I+
Sbjct: 698 EAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEII 757
Query: 473 ETLVQQGRFEEAHDIVKTSKERGI 496
L+ +G +A + + ++GI
Sbjct: 758 RMLLNKGEVAKAGNYLSKIDKKGI 781
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/483 (21%), Positives = 206/483 (42%), Gaps = 42/483 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y A++ + I F M + PDR +N LI+ R+G++D++
Sbjct: 359 GPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKS 418
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + + M G P++ T++ +I FC R+ + M + V P+ A L+ G
Sbjct: 419 LLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQG 478
Query: 125 VFRCLDPHKAFELLIRFMER--EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
D KA EL+ + + P K +++ L +E ++ + G
Sbjct: 479 QCNRRDLVKAKELISDMLSKGIPPPCIKFF-TSIINNLCKEGRVAEGKDVVDLIIHTGQR 537
Query: 183 PESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P TF+ V CLV ++ E G+LD+ GV+P
Sbjct: 538 PNLITFNSLVDGYCLVG--NMKEAVGLLDSMESVGVEP---------------------- 573
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
++ +YN ++D +CK +D A + R+M + + V++N ++ G
Sbjct: 574 -------------DIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGL 620
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ +E+ ++E G T+ +++ LCR + ++A L ++ V +
Sbjct: 621 FQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDI 680
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+T+NI+IR++ +G + LF + + P I T+ +I + + E A+ F S
Sbjct: 681 LTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSS 740
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M PD+ + +I+ L+ G +A +++ G P++ T++L++ G+
Sbjct: 741 MEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGK 800
Query: 481 FEE 483
+ E
Sbjct: 801 YRE 803
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 94/229 (41%), Gaps = 10/229 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P YN ++D K ID A F+ M + +YNI++HG+ +
Sbjct: 569 VGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIV 628
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + +M G A +++TY ++ G C E +LE + NV + T ++
Sbjct: 629 AKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIR 688
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE-----AAAILRKMGD 178
+F+ +A EL T LV L YR+ ++ E A + M
Sbjct: 689 AMFKVGRRQEAKELFAAIS-----TYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEK 743
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
P+S + + L+ ++ + L K+G+ P +T LL+
Sbjct: 744 SSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 792
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 72/169 (42%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++ S Y V+ L ++N D A + +++ K D T+NI+I + ++G EA
Sbjct: 640 GMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEA 699
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + G P + TY ++I + + + M++ + P+ + ++
Sbjct: 700 KELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRM 759
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAIL 173
+ + KA L + ++ L + + L+Y S N E +L
Sbjct: 760 LLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLL 808
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS G+ P+ Y +I L+K S + A F M C PD N +I + G
Sbjct: 706 ISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGE 765
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
V +A + +++ G P T ++LI F + E ++L
Sbjct: 766 VAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLL 808
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 214/472 (45%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y A++D L K D + D P+ TY +LI +C+ VDEA +++ +ME
Sbjct: 347 YTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEME 406
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
+PNV T++ +I+GF + + +MKER + PN T +L+ G F+
Sbjct: 407 EKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQD 466
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A E+ + K + ++L+ L N EA A+ + G + + +
Sbjct: 467 AALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLI 526
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L D+ + R + P Y + + L G+ E +L + L
Sbjct: 527 DGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLK 586
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+ ++YN +I C+ +A ++ EM+ I PNL+T+NTL++G V K + L
Sbjct: 587 PDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYL 646
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L ++ GF P T ++ ++ R + LD M+ G+ + YN L++ LC
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G ++ + ++M I+PD TFNALI C+ + ++ A + ML + P+ +
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
++ L+ L GR EA + ME++G P++ T +++ +Q EA
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEA 818
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 202/453 (44%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D +N LI G CR+G AL + +M G +V Y L+ GFC A +V VL
Sbjct: 168 DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVL 227
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
++MKE V PN AT + R +AF+L + L + + L+ L +
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
SEA A+ R+M G P T+ + L E +L + RGV TY
Sbjct: 288 GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
LM+ L K G+ E L D L N +Y ++ID CK + +D A ++ EM +
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
+ I+PN+VTF+++I+G K + K E M+ E G P+ T+ ++ID + +
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
AL+ +M+ GV N + L+ L G + ++ LF+ +S D + LI
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ + A K ++ + PD Y+ I L G+F EAK M G P
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
D T N ++ + ++G +A ++ K I
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 222/489 (45%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N +I + A +M+ D YN L+ G CR G VD A ++ M+
Sbjct: 172 WNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMK 231
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G PNV TYT I +C K V E F + E M V + T+ +LV G+ R
Sbjct: 232 EAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFS 291
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A+ L + + TL+ L+ E ++L +M RG + + T+ +
Sbjct: 292 EAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALM 351
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L +E L + + P TY +L++AL KA E ++ L + + +
Sbjct: 352 DWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSIS 411
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
NV +++ VI+ F K ++D+ATE R M++R I PN+VT+ TLI G K E+
Sbjct: 412 PNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEV 471
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+L G K +KF +S+++ L + + E+A+ + G+ + + Y LI L
Sbjct: 472 YHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFK 531
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
GD+ + + Q++ + PD +N I C + K ++A+ M +GL+PD +
Sbjct: 532 AGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQST 591
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y+ +I + + G +A + M+ + P+ T N ++ L G E+A ++
Sbjct: 592 YNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMV 651
Query: 493 ERGISFKSF 501
G S S
Sbjct: 652 SAGFSPSSL 660
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 123/498 (24%), Positives = 221/498 (44%), Gaps = 10/498 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y I ++ ++ A+ ++ M + D T + L+ G+CR G EA
Sbjct: 234 GVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEA 293
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++M+ +G APN TY LID A R E+ +L M R V + T +L+
Sbjct: 294 YALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDW 353
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMGDRGYLP 183
+ + + + L RF + L+ V T+L L EA +L +M ++ P
Sbjct: 354 LGKQGKTDEVKDTL-RFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISP 412
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
TF + V L++ +RG+ P TY L++ +K +G
Sbjct: 413 NVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFK----FQGQDAA 468
Query: 244 NHVFKDRLVSNVNSYNMVIDCFC----KVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
V+ D L V ++D + ++ A + ++ ++ + V + TLI G
Sbjct: 469 LEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDG 528
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
K ++ + L++ PD +N I+CLC +F++A L+EM G+ P+
Sbjct: 529 LFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPD 588
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
TYN +I S C G+ A++L+L +M+ I P++ T+N L+ +EKA+
Sbjct: 589 QSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLN 648
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M++ G P + ++ +++A +S R D M G + D N +L+ L G
Sbjct: 649 EMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHG 708
Query: 480 RFEEAHDIVKTSKERGIS 497
+A +++ GI+
Sbjct: 709 MTRKATVVLEEMLGSGIA 726
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 212/459 (46%), Gaps = 16/459 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P+ Y +ID K D A + M + K ++F + L++G+ + G ++EA
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEA 503
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L K G G + + YT LIDG A + F+ + + +RN+ P+ ++V+
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPD-----AVVYN 558
Query: 125 VF-RCL------DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
VF CL K+F +R M +P + NT++ ++A +L +M
Sbjct: 559 VFINCLCMLGKFKEAKSFLTEMRNMGLKP--DQSTYNTMIVSHCRKGETAKALKLLHEMK 616
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-D 236
P T++ V L + + +L+ + G P T+ +++A ++ R D
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
V D + + L +++ YN ++ C M +AT + EM IAP+ +TFN L
Sbjct: 677 VILDIH-EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
I GHCK + + +L P+ TFN+++ L R +A L EM + G+
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGL 795
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
PN +TY+IL + ++RL+ +M P + T+NALI F + + +A++
Sbjct: 796 EPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKE 855
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
F M G+ P + +Y L+ R +++ T+ +
Sbjct: 856 LFKDMQKRGVHPTSCTYDILVSGWYDLAREQKSQNTYFT 894
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 118/516 (22%), Positives = 221/516 (42%), Gaps = 35/516 (6%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+SP+ Y +IDAL K++++D A +M P+ T++ +I+G + G++D+A
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M+ G PNV TY LIDGF + V M V N+ V SLV+G+
Sbjct: 435 EYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGL 494
Query: 126 -----------------------------------FRCLDPHKAFELLIRFMEREPLTQK 150
F+ D AF+ M+R L
Sbjct: 495 RQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDA 554
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
+V N + L EA + L +M + G P+ ST++ + + + +L
Sbjct: 555 VVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHE 614
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
+KP TY L+ L+ G + LN + + ++ V+ +
Sbjct: 615 MKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRR 674
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+D +I M + + ++ +NTL+ C K +L +L G PD TFN+
Sbjct: 675 LDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNA 734
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I C++ ++A ++M+ + PN T+N L+ L ++G + + + +M+
Sbjct: 735 LILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSG 794
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ P+ T++ L + + +A + + M+ G P +Y+ALI K+G +AK
Sbjct: 795 LEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAK 854
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+ F M++ G +P S T ++++ R +++ +
Sbjct: 855 ELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKSQN 890
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 162/350 (46%), Gaps = 16/350 (4%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD-YTVTCLVTGLDLNETCGILDTFI 212
N LL LS+++ A A+L +M RG +P FD TV L+ GL N
Sbjct: 107 NILLAALSDHA---HAPAVLAEMCKRG-VP----FDGVTVNTLLAGLCRNGQVDAAAALA 158
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS-----NVNSYNMVIDCFCK 267
RG ++ AG GD DR+ + +V YN ++ FC+
Sbjct: 159 DRG--GGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+D A + M++ + PN+ T+ I +C+ V + +L ++ G D T
Sbjct: 217 AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVT 276
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
++++ LCR RF +A EM + G PN +TY LI SL G L L +M
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ + D+ T+ AL+ + K ++ + L+ L P+ +Y+ LI AL K+ D
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
EA+Q L ME+ +P+ T + ++ V++G ++A + + KERGI+
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGIN 446
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 77/211 (36%), Gaps = 43/211 (20%)
Query: 321 FKP-DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
F+P D + N+++ CR A+ L P T+ YNIL L A+ D A +
Sbjct: 68 FRPADPASLNALLYSHCRLRLLRPAIALLRS-----SRPTTVAYNIL---LAALSDHAHA 119
Query: 380 LRLFQKM-----------------------QADRISP-----------DIYTFNALIQSF 405
+ +M Q D + D+ +N LI +
Sbjct: 120 PAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGY 179
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
CR+ A M GL D Y+ L+ ++G+ D A+ M++ G +P+
Sbjct: 180 CRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNV 239
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
T + + EEA D+ + G+
Sbjct: 240 ATYTPFIVYYCRTKGVEEAFDLYEGMVRNGV 270
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 223/492 (45%), Gaps = 33/492 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S S + +IDA K+ +D A ++M + D Y LI G C G +D
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRG 266
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++ G +P TY LI GFC ++ E + E M ER V PN T L+ G
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG 326
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A + L +E++ + N ++ +L + + ++A I+ M R P+
Sbjct: 327 LCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD 386
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + L DL+E +L YL+L ++ Y
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLL--------------YLMLKDSSYTD----------- 421
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+V SYN +I CK N + +A +I + ++ A + VT N L++ K
Sbjct: 422 --------PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V+K EL + + + T+ +MID C+ A L +M + P+ YN
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ SLC G + ++ RLF++MQ D PD+ +FN +I + I+ AE M
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL PD F+YS LI +K G DEA F M +G PD++ + +L+ + QG ++
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKL 653
Query: 485 HDIVKTSKERGI 496
++VK ++ I
Sbjct: 654 TELVKKLVDKDI 665
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 229/487 (47%), Gaps = 37/487 (7%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N ++ L ++ A ++M + PD F+YN +I G C +++AL L +M+
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G G + ++ T+ ILID FC A ++ E L+ MK + + SL+ G C +
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+ L +ER + NTL+ R G L E+S
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLI----------------RGFCKLGQLKEASE----- 303
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
I + I+RGV+P TY L++ L G+ E + LN + +
Sbjct: 304 --------------IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEE 349
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
N +YN++I+ CK ++ A EI M+ R P+ +T+N L+ G C ++ + +L
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Query: 313 LVMLLECG--FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
L ++L+ PD ++N++I LC+ +R ALD +VE + +T NIL+ S
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNST 469
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
GDV +++ L++++ +I + T+ A+I FC+ + A+ M L+P
Sbjct: 470 LKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSV 529
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
F Y+ L+ +L K G D+A + F M+++ PD + N++++ ++ G + A ++
Sbjct: 530 FDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVG 589
Query: 491 SKERGIS 497
G+S
Sbjct: 590 MSRAGLS 596
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 186/406 (45%), Gaps = 4/406 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F+G+ +Y ++I +D F ++ P TYN LI G C++G
Sbjct: 238 MKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQ 297
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ EA + + M G PNVYTYT LIDG C + E + L +M E++ PN T
Sbjct: 298 LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNI 357
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDR 179
+++ + + A E++ +R + N LL L EA+ +L M D
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Query: 180 GYL-PESSTFDYTVTCLVTGLDLNETCGILDTFIKR-GVKPRFSTYLLLMEALYKAGRDV 237
Y P+ +++ + L L++ I D +++ G R +T +LL L KAG
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTL-KAGDVN 476
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ + ++V N ++Y +ID FCK M++ A + +MR ++ P++ +N L+
Sbjct: 477 KAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLL 536
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
S CK+ + + L + PD +FN MID +A + A L M G+
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLS 596
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
P+ TY+ LI +G + ++ F KM PD + +++++
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 130/241 (53%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV ++N+++ C+ +A + REMR + P++ ++NT+I G C+ E+ K EL
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ G T+ +ID C+A + ++A+ L EM G+ + + Y LIR C
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G++ R LF ++ SP T+N LI+ FC++ ++++A + F M+ G+RP+ ++Y
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ LI L G+ EA Q M + P++ T N+I+ L + G +A +IV+ K+
Sbjct: 321 TGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 494 R 494
R
Sbjct: 381 R 381
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 107/218 (49%)
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
R+M + D N V+ + L+ + + + +L ++L+ GF + + N ++ LCR
Sbjct: 96 RKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRN 155
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
A+ L EM + P+ +YN +IR C ++ ++L L +M+ S + T+
Sbjct: 156 LECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTW 215
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
LI +FC+ K+++A M +GL D Y++LI+ G D K F + +
Sbjct: 216 GILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLE 275
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G +P + T N ++ + G+ +EA +I + ERG+
Sbjct: 276 RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 152/337 (45%), Gaps = 10/337 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ YN +I+ L K + A + M + +PD TYNIL+ G+C G +DEA +L
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Query: 68 VKQM-EGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M + Y P+V +Y LI G C R+ + + +++ E+ + T L++
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNST 469
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ D +KA EL + + + + ++ M + A +L KM R +
Sbjct: 470 LKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM--RVSELQP 527
Query: 186 STFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
S FDY CL++ L L++ + + + P ++ ++++ KAG +
Sbjct: 528 SVFDY--NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAES 585
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + + L ++ +Y+ +I+ F K+ +D A +M D P+ ++++
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCI 645
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
E K EL+ L++ DK +++D +C +
Sbjct: 646 SQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNS 682
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ PS YN ++ +L K S+D A+ F++M D PD ++NI+I G + G + A
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L+ M G +P+++TY+ LI+ F + E + M + P+ S++
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644
Query: 126 FRCLDPHKAFELLIRFMERE-PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+ K EL+ + ++++ L ++L C + Y ++++ A +LR D+
Sbjct: 645 ISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTDDK 699
>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
Length = 933
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 214/472 (45%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y A++D L K D + D P+ TY +LI +C+ VDEA +++ +ME
Sbjct: 347 YTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEME 406
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
+PNV T++ +I+GF + + +MKER + PN T +L+ G F+
Sbjct: 407 EKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQD 466
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A E+ + K + ++L+ L N EA A+ + G + + +
Sbjct: 467 AALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLI 526
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L D+ + R + P Y + + L G+ E +L + L
Sbjct: 527 DGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLK 586
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+ ++YN +I C+ +A ++ EM+ I PNL+T+NTL++G V K + L
Sbjct: 587 PDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYL 646
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L ++ GF P T ++ ++ R + LD M+ G+ + YN L++ LC
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G ++ + ++M I+PD TFNALI C+ + ++ A + ML + P+ +
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
++ L+ L GR EA + ME++G P++ T +++ +Q EA
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEA 818
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 194/442 (43%)
Query: 55 ICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPN 114
I G AL + +M G +V Y L+ GFC A +V VL++MKE V PN
Sbjct: 179 IAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPN 238
Query: 115 EATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILR 174
AT + R +AF+L + L + + L+ L + SEA A+ R
Sbjct: 239 VATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFR 298
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
+M G P T+ + L E +L + RGV TY LM+ L K G
Sbjct: 299 EMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQG 358
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
+ E L D L N +Y ++ID CK + +D A ++ EM ++ I+PN+VTF+
Sbjct: 359 KTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFS 418
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
++I+G K + K E M+ E G P+ T+ ++ID + + AL+ +M+
Sbjct: 419 SVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCE 478
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
GV N + L+ L G + ++ LF+ +S D + LI + + A
Sbjct: 479 GVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTA 538
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
K ++ + PD Y+ I L G+F EAK M G PD T N ++ +
Sbjct: 539 FKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVS 598
Query: 475 LVQQGRFEEAHDIVKTSKERGI 496
++G +A ++ K I
Sbjct: 599 HCRKGETAKALKLLHEMKMSSI 620
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 225/493 (45%), Gaps = 16/493 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P+ Y +ID K D A + M + K ++F + L++G+ + G ++EA
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEA 503
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L K G G + + YT LIDG A + F+ + + +RN+ P+ ++V+
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPD-----AVVYN 558
Query: 125 VF-RCL------DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
VF CL K+F +R M +P + NT++ ++A +L +M
Sbjct: 559 VFINCLCMLGKFKEAKSFLTEMRNMGLKP--DQSTYNTMIVSHCRKGETAKALKLLHEMK 616
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-D 236
P T++ V L + + +L+ + G P T+ +++A ++ R D
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
V D + + L +++ YN ++ C M +AT + EM IAP+ +TFN L
Sbjct: 677 VILDIH-EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
I GHCK + + +L P+ TFN+++ L R +A L EM + G+
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGL 795
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
PN +TY+IL + ++RL+ +M P + T+NALI F + + +A++
Sbjct: 796 EPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKE 855
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
F M G+ P + +Y L+ + E K+ M++ G +P T + I
Sbjct: 856 LFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFS 915
Query: 477 QQGRFEEAHDIVK 489
+ G +A ++K
Sbjct: 916 KPGMTWQAQRLLK 928
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 129/488 (26%), Positives = 214/488 (43%), Gaps = 35/488 (7%)
Query: 35 QMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAK 94
+M+ D YN L+ G CR G VD A ++ M+ G PNV TYT I +C K
Sbjct: 194 RMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTK 253
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCN 154
V E F + E M V + T+ +LV G+ R +A+ L + +
Sbjct: 254 GVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYC 313
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
TL+ L+ E ++L +M RG + + T+ + L +E L +
Sbjct: 314 TLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSD 373
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
+ P TY +L++AL KA E ++ L + + + NV +++ VI+ F K ++D+A
Sbjct: 374 NLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKA 433
Query: 275 TEICREMRDRDIAPNLVTFNTLISGH-----------------CKDAEVHK--------- 308
TE R M++R I PN+VT+ TLI G C+ +V+K
Sbjct: 434 TEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNG 493
Query: 309 ------TRELLVMLLEC---GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
E + + + G D + ++ID L +A A E+++ + P+
Sbjct: 494 LRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPD 553
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+ YN+ I LC +G + +M+ + PD T+N +I S CR + KA K
Sbjct: 554 AVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLH 613
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M ++P+ +Y+ L+ L +G ++AK M G +P S T +L+ Q
Sbjct: 614 EMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSR 673
Query: 480 RFEEAHDI 487
R + DI
Sbjct: 674 RLDVILDI 681
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/527 (23%), Positives = 225/527 (42%), Gaps = 35/527 (6%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+SP+ Y +IDAL K++++D A +M P+ T++ +I+G + G++D+A
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M+ G PNV TY LIDGF + V M V N+ V SLV+G+
Sbjct: 435 EYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGL 494
Query: 126 -----------------------------------FRCLDPHKAFELLIRFMEREPLTQK 150
F+ D AF+ M+R L
Sbjct: 495 RQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDA 554
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
+V N + L EA + L +M + G P+ ST++ + + + +L
Sbjct: 555 VVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHE 614
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
+KP TY L+ L+ G + LN + + ++ V+ +
Sbjct: 615 MKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRR 674
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+D +I M + + ++ +NTL+ C K +L +L G PD TFN+
Sbjct: 675 LDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNA 734
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I C++ ++A ++M+ + PN T+N L+ L ++G + + + +M+
Sbjct: 735 LILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSG 794
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ P+ T++ L + + +A + + M+ G P +Y+ALI K+G +AK
Sbjct: 795 LEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAK 854
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ F M++ G +P S T ++++ + E +K KE+G S
Sbjct: 855 ELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFS 901
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 166/352 (47%), Gaps = 20/352 (5%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD-YTVTCLVTGLDLNETCGILDTFI 212
N LL LS+++ A A+L +M RG +P FD TV L+ GL N
Sbjct: 107 NILLAALSDHA---HAPAVLAEMCKRG-VP----FDGVTVNTLLAGLCRNGQVDAAAALA 158
Query: 213 KR--GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS-----NVNSYNMVIDCF 265
R G+ P S+ L L AG GD DR+ + +V YN ++ F
Sbjct: 159 DRAGGITPWMSSAGTL-SLLDIAGF---GDTPAALSVADRMTAQGLPMDVVGYNTLVAGF 214
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C+ +D A + M++ + PN+ T+ I +C+ V + +L ++ G D
Sbjct: 215 CRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDV 274
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T ++++ LCR RF +A EM + G PN +TY LI SL G L L +
Sbjct: 275 VTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGE 334
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M + + D+ T+ AL+ + K ++ + L+ L P+ +Y+ LI AL K+
Sbjct: 335 MVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHN 394
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
DEA+Q L ME+ +P+ T + ++ V++G ++A + + KERGI+
Sbjct: 395 VDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGIN 446
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 166/410 (40%), Gaps = 37/410 (9%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQ-CKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
Y +ID L K+ + A+ KF Q +D+ PD YN+ I+ +C +G EA + +M
Sbjct: 522 YTTLIDGLFKAGDMPTAF-KFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
+G P+ TY +I C A+ ++L MK ++ PN T +LV G+F
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640
Query: 132 HKAFELLIRFMER----EPLTQK-------------------------------LVCNTL 156
KA LL + LT + V NTL
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700
Query: 157 LYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
L L + M +A +L +M G P++ TF+ + L+ + + +
Sbjct: 701 LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
P +T+ L+ L GR E L + K L N +Y+++ K + A
Sbjct: 761 SPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMR 820
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
+ EM + P + T+N LIS K + + +EL + + G P T++ ++
Sbjct: 821 LYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWS 880
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
R + CL +M E G P+ T + + R+ G ++ RL + +
Sbjct: 881 RIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 199/457 (43%), Gaps = 13/457 (2%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D + N L++ CR+ ++ A+ L++ P Y IL+ + A VL
Sbjct: 72 DPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAALSDH---AHAPAVL 123
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
M +R V + TV +L+ G+ R A L R P +LL ++
Sbjct: 124 AEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLSLL-DIAGF 182
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
A ++ +M +G + ++ V ++ G+LD + GV P +TY
Sbjct: 183 GDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATY 242
Query: 224 LLLMEALYKAGRDVEG--DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+ Y + VE D Y V ++ ++ +V + + ++ C+ A + REM
Sbjct: 243 TPFI-VYYCRTKGVEEAFDLYEGMV-RNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM 300
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
APN VT+ TLI K + LL ++ G D T+ +++D L + +
Sbjct: 301 DKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKT 360
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
++ D L + + PN +TY +LI +LC +V + ++ +M+ ISP++ TF+++
Sbjct: 361 DEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I F + ++KA + M G+ P+ +Y LI K D A + + M G
Sbjct: 421 INGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGV 480
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
+ + + ++ L Q G+ EEA + K + G+S
Sbjct: 481 KVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSL 517
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 148/340 (43%), Gaps = 14/340 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P YN +I + + A +M + KP+ TYN L+ G+ G V++
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV- 122
A L+ +M G++P+ T+ ++ ++R+ + + E M + + +L+
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702
Query: 123 ----HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
HG+ R KA +L + + N L+ +S A A +M
Sbjct: 703 VLCYHGMTR-----KATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLH 757
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+ P +TF+ + L + + E +L K G++P TY +L K VE
Sbjct: 758 QNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVE 817
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
R + V V++YN +I F K MM +A E+ ++M+ R + P T++ L+S
Sbjct: 818 AMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVS 877
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
G + + ++ L + E GF P K T + +CRA
Sbjct: 878 GWSRIRNGTEVKKCLKDMKEKGFSPSKGT----LSFICRA 913
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 230/493 (46%), Gaps = 2/493 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ + + ++ +LVK LA F +M D + Y I C +D A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LV +ME G + Y +L+ G C RV E V +M V +E T R+LV+G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + A + + + + C+ ++ L + EA ++ K+GD G +P
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + L ++ + RG++P TY +L+ AL K G +E L
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM-IEDALCLF 396
Query: 245 HVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+D+ + V YN +I+ +CK +DRA + M + P +++ LI+G C++
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 456
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ EL + E G + +TF ++I+ C+ + ++A +M++ V PN +T+
Sbjct: 457 GDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 516
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N++I C +G++ ++ +L+ +M + PD YT+ +LI C + + KA + +
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+NFS +AL+ L + GRF E + M G D + +I+ ++Q E+
Sbjct: 577 SYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 636
Query: 484 AHDIVKTSKERGI 496
+ + + KE+G+
Sbjct: 637 SCVLFREMKEQGV 649
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/529 (26%), Positives = 224/529 (42%), Gaps = 38/529 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ YNA+ID L K+ D A F++M+ +P+ TY ILIH +C+ G++++
Sbjct: 332 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 391
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L +M G VY Y LI+G+C + +L M + + P A+ L+
Sbjct: 392 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIA 451
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R D A EL ER L+ + EAA + KM D +P
Sbjct: 452 GLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 511
Query: 184 ESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
TF+ + CLV ++ + + D ++ G+KP TY L+ L + +
Sbjct: 512 NEVTFNVMIEGYCLVG--NIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 569
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
++ + V N S ++ + + EM R + +LV+F ++
Sbjct: 570 FVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 629
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + K+ L + E G KPD + MID L + AL+C +MV G PNT+
Sbjct: 630 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTV 689
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT------------------------ 397
T+ +LI +LC G + + L ++M A + P+ +T
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749
Query: 398 ----------FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
FN LI+ C+ KI++A + G PD SYS +I L K G +
Sbjct: 750 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDIN 809
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+A + + M G PD N+ + G ++A I G+
Sbjct: 810 KAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGV 858
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/476 (28%), Positives = 223/476 (46%), Gaps = 11/476 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + YN++I+ K S+D A M + P +Y+ LI G+CR G + A
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSA 462
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L ++M G A N YT+T LI+GFC K++ E R+ + M + NV PNE T ++ G
Sbjct: 463 MELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 522
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KAF+L + +E +L+ L S S+A + + + Y
Sbjct: 523 YCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADL-ENSY--- 578
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ ++++T L+ GL ET + D RGVK ++ +++ A K D E
Sbjct: 579 AVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQ-HDKEKS 637
Query: 241 RYLNHVFKDRLVSNVNS-YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L K++ V + Y +ID K M +A +M +PN VT LI+
Sbjct: 638 CVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINN 697
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK + L +L P+KFT+N +D E A D S M++ G +
Sbjct: 698 LCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLAS 756
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+++NILI+ LC G + ++ L +K+ SPD +++ +I C+M I KA + +
Sbjct: 757 IVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWN 816
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
ML GL+PD +Y+ I+ G D+A + +M ++G P+ T +L +
Sbjct: 817 EMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/520 (23%), Positives = 217/520 (41%), Gaps = 35/520 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ +Y A I A +S ++D A +M + K YN+L++G+C+ V EA
Sbjct: 193 GVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEA 252
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + M +G + TY L+ GFC + + R+ M P+EA ++
Sbjct: 253 VEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDE 312
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF L + + + N L+ +L N +A + ++M RG P
Sbjct: 313 LRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPN 372
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L + + + D +G+K Y L+ K G L+
Sbjct: 373 EVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 432
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K+ L SY+ +I C+ + A E+ REM +R IA N TF LI+G CKD
Sbjct: 433 GMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDK 492
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + L +++ P++ TFN MI+ C A +MVE G+ P+ TY
Sbjct: 493 KMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYR 552
Query: 365 ILIRSLCAIGDVAR-----------------------------------SLRLFQKMQAD 389
LI LC V++ + L+ +M
Sbjct: 553 SLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVR 612
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ D+ +F ++ + + + EK+ F M G++PD+ Y+ +I AL K +A
Sbjct: 613 GVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQA 672
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+ M +G +P++ T +++ L + G A + K
Sbjct: 673 LNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCK 712
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/518 (22%), Positives = 212/518 (40%), Gaps = 35/518 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG----- 59
G+ S YN ++ L K+ + A M D TY L++G CR+
Sbjct: 228 GVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMA 287
Query: 60 ------------------------------VVDEALRLVKQMEGLGYAPNVYTYTILIDG 89
+V+EA L ++ LG PNV+ Y LID
Sbjct: 288 LRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDK 347
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C +R + R+ + M R + PNE T L+H + + A L + ++
Sbjct: 348 LCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVT 407
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
N+L+ A +L M G P ++++ + L DL+ +
Sbjct: 408 VYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHR 467
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+RG+ T+ L+ K + E R + + ++ N ++N++I+ +C V
Sbjct: 468 EMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVG 527
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+ +A ++ +M + + P+ T+ +LISG C + V K E + L + F+
Sbjct: 528 NIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLT 587
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+++ L R RF + EM GV + +++ I++ + D +S LF++M+
Sbjct: 588 ALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ 647
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ PD + +I + + + +A + M+ G P+ +++ LI L KSG A
Sbjct: 648 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSA 707
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+ M P+ +T N L+ +G E+A D+
Sbjct: 708 ELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDL 745
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 220/499 (44%), Gaps = 11/499 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG PS + +ID L K ++ A+ ++ P+ F YN LI +C+ D+
Sbjct: 297 LGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDD 356
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A RL K+M G G PN TY ILI C + + + + M+++ + SL++
Sbjct: 357 ADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLIN 416
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G + +A LL M +E LT + L+ L N S A + R+M +RG
Sbjct: 417 GYCKQGSLDRARGLL-SGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGI- 474
Query: 183 PESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+ +YT T L+ G ++E + D I V P T+ +++E G +
Sbjct: 475 ---AWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRK 531
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + + L + +Y +I C + + +A E ++ + N + L+
Sbjct: 532 AFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLY 591
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G ++ +T L + G K D +F ++ + H E + EM E GV P
Sbjct: 592 GLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKP 651
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ I Y +I +L ++ ++L + +M D SP+ T LI + C+ + AE
Sbjct: 652 DDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLC 711
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
ML + P+ F+Y+ + G ++AK +M Q G + N++++ L +
Sbjct: 712 KEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKA 770
Query: 479 GRFEEAHDIVKTSKERGIS 497
G+ +EA D+++ E G S
Sbjct: 771 GKIQEAIDLMRKITESGFS 789
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 136/296 (45%), Gaps = 2/296 (0%)
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV-SNVNSYNMVIDCF 265
+ D ++ GV Y + A Y R+++G R L + V ++ YN+++
Sbjct: 185 LFDKMLQSGVHLDEYVYTAGIRA-YCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGL 243
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
CK + A E+ M + + + VT+ TL+ G C+ E+ + ++ GF P +
Sbjct: 244 CKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSE 303
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
+ MID L + E+A ++ + G+ PN YN LI LC + RLF++
Sbjct: 304 ANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKE 363
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M + P+ T+ LI + C+ IE A F M G++ + Y++LI K G
Sbjct: 364 MAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGS 423
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
D A+ M + G P + + + ++ L + G A ++ + ERGI++ ++
Sbjct: 424 LDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNY 479
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 116/250 (46%), Gaps = 2/250 (0%)
Query: 255 VNSY--NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
VN Y + ++ K+ A ++ +M + + + I +C+ + R L
Sbjct: 161 VNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGL 220
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+V + G K +N ++ LC+ R ++A++ + MV GV + +TY L+ C
Sbjct: 221 VVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR 280
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
+ ++ +LR+ M P + +I + +E+A + LG+ P+ F+
Sbjct: 281 MEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFA 340
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y+ALI L K+ RFD+A + F M G P+ T +++ L ++G E+A + +
Sbjct: 341 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400
Query: 493 ERGISFKSFP 502
++GI +P
Sbjct: 401 DKGIKVTVYP 410
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 214/472 (45%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y A++D L K D + D P+ TY +LI +C+ VDEA +++ +ME
Sbjct: 347 YTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEME 406
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
+PNV T++ +I+GF + + +MKER + PN T +L+ G F+
Sbjct: 407 EKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQD 466
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A E+ + K + ++L+ L N EA A+ + G + + +
Sbjct: 467 AALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLI 526
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L D+ + R + P Y + + L G+ E +L + L
Sbjct: 527 DGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLK 586
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+ ++YN +I C+ +A ++ EM+ I PNL+T+NTL++G V K + L
Sbjct: 587 PDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYL 646
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L ++ GF P T ++ ++ R + LD M+ G+ + YN L++ LC
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G ++ + ++M I+PD TFNALI C+ + ++ A + ML + P+ +
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
++ L+ L GR EA + ME++G P++ T +++ +Q EA
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEA 818
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 202/453 (44%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D +N LI G CR+G AL + +M G +V Y L+ GFC A +V VL
Sbjct: 168 DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVL 227
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
++MKE V PN AT + R +AF+L + L + + L+ L +
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
SEA A+ R+M G P T+ + L E +L + RGV TY
Sbjct: 288 GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
LM+ L K G+ E L D L N +Y ++ID CK + +D A ++ EM +
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
+ I+PN+VTF+++I+G K + K E M+ E G P+ T+ ++ID + +
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
AL+ +M+ GV N + L+ L G + ++ LF+ +S D + LI
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ + A K ++ + PD Y+ I L G+F EAK M G P
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
D T N ++ + ++G +A ++ K I
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 225/493 (45%), Gaps = 16/493 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P+ Y +ID K D A + M + K ++F + L++G+ + G ++EA
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEA 503
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L K G G + + YT LIDG A + F+ + + +RN+ P+ ++V+
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPD-----AVVYN 558
Query: 125 VF-RCL------DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
VF CL K+F +R M +P + NT++ ++A +L +M
Sbjct: 559 VFINCLCMLGKFKEAKSFLTEMRNMGLKP--DQSTYNTMIVSHCRKGETAKALKLLHEMK 616
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-D 236
P T++ V L + + +L+ + G P T+ +++A ++ R D
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
V D + + L +++ YN ++ C M +AT + EM IAP+ +TFN L
Sbjct: 677 VILDIH-EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
I GHCK + + +L P+ TFN+++ L R +A L EM + G+
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGL 795
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
PN +TY+IL + ++RL+ +M P + T+NALI F + + +A++
Sbjct: 796 EPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKE 855
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
F M G+ P + +Y L+ + E K+ M++ G +P T + I
Sbjct: 856 LFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFS 915
Query: 477 QQGRFEEAHDIVK 489
+ G +A ++K
Sbjct: 916 KPGMTWQAQRLLK 928
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 126/528 (23%), Positives = 228/528 (43%), Gaps = 37/528 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+SP+ Y +IDAL K++++D A +M P+ T++ +I+G + G++D+A
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M+ G PNV TY LIDGF + V M V N+ V SLV+G+
Sbjct: 435 EYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGL 494
Query: 126 -----------------------------------FRCLDPHKAFELLIRFMEREPLTQK 150
F+ D AF+ M+R L
Sbjct: 495 RQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDA 554
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
+V N + L EA + L +M + G P+ ST++ + + + +L
Sbjct: 555 VVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHE 614
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL-NHVFKDRLVSNVNSYNMVIDCFCKVN 269
+KP TY L+ L+ G VE +YL N + + ++ V+ +
Sbjct: 615 MKMSSIKPNLITYNTLVAGLFGTGA-VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSR 673
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+D +I M + + ++ +NTL+ C K +L +L G PD TFN
Sbjct: 674 RLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFN 733
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++I C++ ++A ++M+ + PN T+N L+ L ++G + + + +M+
Sbjct: 734 ALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKS 793
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ P+ T++ L + + +A + + M+ G P +Y+ALI K+G +A
Sbjct: 794 GLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQA 853
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
K+ F M++ G +P S T ++++ + E +K KE+G S
Sbjct: 854 KELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFS 901
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 162/350 (46%), Gaps = 16/350 (4%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD-YTVTCLVTGLDLNETCGILDTFI 212
N LL LS+++ A A+L +M RG +P FD TV L+ GL N
Sbjct: 107 NILLAALSDHA---HAPAVLAEMCKRG-VP----FDGVTVNTLLAGLCRNGQVDAAAALA 158
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS-----NVNSYNMVIDCFCK 267
RG ++ AG GD DR+ + +V YN ++ FC+
Sbjct: 159 DRG--GGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+D A + M++ + PN+ T+ I +C+ V + +L ++ G D T
Sbjct: 217 AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVT 276
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
++++ LCR RF +A EM + G PN +TY LI SL G L L +M
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ + D+ T+ AL+ + K ++ + L+ L P+ +Y+ LI AL K+ D
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
EA+Q L ME+ +P+ T + ++ V++G ++A + + KERGI+
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGIN 446
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 199/457 (43%), Gaps = 13/457 (2%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D + N L++ CR+ ++ A+ L++ P Y IL+ + A VL
Sbjct: 72 DPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAALSDH---AHAPAVL 123
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
M +R V + TV +L+ G+ R A L R L + NTL+
Sbjct: 124 AEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHAL-DVIGWNTLIAGYCRV 182
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
A ++ +M +G + ++ V ++ G+LD + GV P +TY
Sbjct: 183 GDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATY 242
Query: 224 LLLMEALYKAGRDVEG--DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+ Y + VE D Y V ++ ++ +V + + ++ C+ A + REM
Sbjct: 243 TPFI-VYYCRTKGVEEAFDLYEGMV-RNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM 300
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
APN VT+ TLI K + LL ++ G D T+ +++D L + +
Sbjct: 301 DKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKT 360
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
++ D L + + PN +TY +LI +LC +V + ++ +M+ ISP++ TF+++
Sbjct: 361 DEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I F + ++KA + M G+ P+ +Y LI K D A + + M G
Sbjct: 421 INGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGV 480
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
+ + + ++ L Q G+ EEA + K + G+S
Sbjct: 481 KVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSL 517
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 169/418 (40%), Gaps = 37/418 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ-CKPDRFTYNILIHGICRIGVVDE 63
G+S Y +ID L K+ + A+ KF Q +D+ PD YN+ I+ +C +G E
Sbjct: 514 GLSLDHVNYTTLIDGLFKAGDMPTAF-KFGQELMDRNMLPDAVVYNVFINCLCMLGKFKE 572
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + +M +G P+ TY +I C A+ ++L MK ++ PN T +LV
Sbjct: 573 AKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632
Query: 124 GVFRCLDPHKAFELLIRFMER----EPLTQK----------------------------- 150
G+F KA LL + LT +
Sbjct: 633 GLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHA 692
Query: 151 --LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
V NTLL L + M +A +L +M G P++ TF+ + L+
Sbjct: 693 DITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATY 752
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ + + P +T+ L+ L GR E L + K L N +Y+++ K
Sbjct: 753 AQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQ 812
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+ A + EM + P + T+N LIS K + + +EL + + G P T+
Sbjct: 813 SNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTY 872
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
+ ++ R + CL +M E G P+ T + + R+ G ++ RL + +
Sbjct: 873 DILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 148/340 (43%), Gaps = 14/340 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P YN +I + + A +M + KP+ TYN L+ G+ G V++
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV- 122
A L+ +M G++P+ T+ ++ ++R+ + + E M + + +L+
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702
Query: 123 ----HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
HG+ R KA +L + + N L+ +S A A +M
Sbjct: 703 VLCYHGMTR-----KATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLH 757
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+ P +TF+ + L + + E +L K G++P TY +L K VE
Sbjct: 758 QNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVE 817
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
R + V V++YN +I F K MM +A E+ ++M+ R + P T++ L+S
Sbjct: 818 AMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVS 877
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
G + + ++ L + E GF P K T + +CRA
Sbjct: 878 GWSRIRNGTEVKKCLKDMKEKGFSPSKGT----LSFICRA 913
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 227/478 (47%), Gaps = 2/478 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD-QCKPDRFTYNILIHGICRIG 59
+S G+ YN +ID K D ++++ D P+ TYNI+I+G+C+ G
Sbjct: 212 MSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCG 271
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
DE+L + ++M +++TY+ LI G C A + RV + + E ++ + T
Sbjct: 272 RFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHN 331
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
++++G R ++FEL + M +E + N L+ L N EA +I + +
Sbjct: 332 AMLNGFCRAGKIKESFELWM-VMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKK 390
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G PES+T+ + L LN+ I K Y +++ L K GR E
Sbjct: 391 GCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEA 450
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+N + K + + N +I+ F + + ++ A REM + +P +V++NTLI G
Sbjct: 451 ISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKG 510
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK + + +LE +KPD T + ++D LC+ + E AL+ + ++ G P+
Sbjct: 511 LCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPD 570
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
YNIL+ LC++ + +L+L+ M+ P++ T N L++ ++ EKA + +
Sbjct: 571 ITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWD 630
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
+L GL PD SY+ IK L R +A + G P + T N+++ V
Sbjct: 631 CILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRAAVN 688
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/485 (23%), Positives = 226/485 (46%), Gaps = 2/485 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ +SP+ + YN +I K I+ A M KPD F+Y LI+G+ ++G +
Sbjct: 145 MDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLG 204
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE-IMKERNVCPNEATVRSLV 122
AL++ +M G +V Y +LIDGF + + E ++K+ +V PN T ++
Sbjct: 205 ALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMI 264
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G+ +C ++ E+ R + E ++L++ L A + +++ + +
Sbjct: 265 NGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLV 324
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
++ T + + + E+ + K + S Y +L++ L++ G+ E
Sbjct: 325 VDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVS-YNILIKGLFENGKVEEAISI 383
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ K +Y ++I CK +++A +I +E D + +++++ G CK
Sbjct: 384 WELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCK 443
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + ++ + + G+K D N +I+ RA + EDA++ EM G P ++
Sbjct: 444 EGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVS 503
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN LI+ LC + + ++M PD+ T + L+ C+ KIE A + L
Sbjct: 504 YNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQAL 563
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G +PD Y+ L+ L + ++A Q + M+++ C P+ T N ++E L + +E
Sbjct: 564 DKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYE 623
Query: 483 EAHDI 487
+A +I
Sbjct: 624 KASEI 628
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/493 (24%), Positives = 218/493 (44%), Gaps = 4/493 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P Y +I+ +VK + A F +MSV D YN+LI G + G D+
Sbjct: 182 LKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGK 241
Query: 66 RLVKQM-EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +++ + PNV TY I+I+G C R E + E M + + T SL+HG
Sbjct: 242 EIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHG 301
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A + +E + + N +L E+ + MG
Sbjct: 302 LCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKEN-CQT 360
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+++ + L + E I + K+G +P +TY +L+ L K GR + +
Sbjct: 361 VVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFK 420
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +Y+ ++D CK MD A I +M R + N LI+G + +
Sbjct: 421 EAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRAS 480
Query: 305 EVHKTRELLVMLLEC-GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ +EC G P ++N++I LC+A RF +A + EM+E P+ IT
Sbjct: 481 KLEDAINFF-REMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITC 539
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
++L+ LC + +L L+Q+ PDI +N L+ C + K+E A + + M
Sbjct: 540 SLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKR 599
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
P+ + + L++ L K +++A + + + ++G +PD + N+ ++ L R +
Sbjct: 600 STCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISD 659
Query: 484 AHDIVKTSKERGI 496
A + + + RGI
Sbjct: 660 AIEFLNDALNRGI 672
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 214/482 (44%), Gaps = 3/482 (0%)
Query: 16 VIDALVKSNSIDLAYLKFQQMS-VDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGL 74
VI A K+ + A FQ M + CKP +YN L++ + D A + E +
Sbjct: 86 VIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESM 145
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
+PN+ TY ILI C +++ + +L+ M +N+ P+ + +L++G+ + D A
Sbjct: 146 DVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGA 205
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDRGYLPESSTFDYTVT 193
++ R + N L+ + + I ++ D P T++ +
Sbjct: 206 LKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMIN 265
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
L +E+ I + K + TY L+ L +AG R + + LV
Sbjct: 266 GLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVV 325
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+ ++N +++ FC+ + + E+ M ++ +V++N LI G ++ +V + +
Sbjct: 326 DAVTHNAMLNGFCRAGKIKESFELWMVM-GKENCQTVVSYNILIKGLFENGKVEEAISIW 384
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+L + G +P+ T+ +I LC+ R AL E + + Y+ ++ LC
Sbjct: 385 ELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKE 444
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G + ++ + +M D + N LI F R +K+E A F M G P SY
Sbjct: 445 GRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSY 504
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ LIK L K+ RF EA M + PD T +L+++ L Q+ + E A ++ + + +
Sbjct: 505 NTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALD 564
Query: 494 RG 495
+G
Sbjct: 565 KG 566
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 166/364 (45%), Gaps = 3/364 (0%)
Query: 136 ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA-AILRKMGDRGYLPESSTFDYTVTC 194
E R+ E ++ L +L ++S E A ++L M + P+ ++ +
Sbjct: 136 ESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLING 195
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD-RLVS 253
+V DL + D RGV + Y +L++ +K G +G + KD +
Sbjct: 196 MVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYP 255
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV +YN++I+ CK D + EI M + ++ T+++LI G C+ + +
Sbjct: 256 NVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVY 315
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++E D T N+M++ CRA + +++ + M + ++YNILI+ L
Sbjct: 316 KEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQ-TVVSYNILIKGLFEN 374
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G V ++ +++ + P+ T+ LI C+ ++ KA K F + D ++Y
Sbjct: 375 GKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAY 434
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
S+++ L K GR DEA M++ G D + N ++ V+ + E+A + + +
Sbjct: 435 SSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMEC 494
Query: 494 RGIS 497
+G S
Sbjct: 495 KGCS 498
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 139/538 (25%), Positives = 244/538 (45%), Gaps = 59/538 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T Y+ VI L + ++ A+L FQ+M + PD +TY ILI C+ G++++A
Sbjct: 218 GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQA 277
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++M +G +P V TYT LI + AK+V + + M + PN+ T +LV G
Sbjct: 278 QWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDG 337
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL-P 183
+ + + KAFE+ + + + S + DR L P
Sbjct: 338 LCKAGNISKAFEVYAKLI--------------------GTSDSADSDFYFPCEDRHTLAP 377
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ V L ++ +LD + G +P Y L++ KAG+
Sbjct: 378 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 437
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ K + +V++Y +ID K +D A ++ +M PN+VT+ +I G C+
Sbjct: 438 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 497
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E K +LL ++ E G P+ T+ ++ID L +A + + +LD ++M G PN +TY
Sbjct: 498 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 557
Query: 364 NILIRSLCAIG--DVAR-------------------------------SLRLFQKMQADR 390
+LI LCA G D AR SL + ++M++
Sbjct: 558 RVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYG 617
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL--GLRPDNFSYSALIKALIKSGRFDE 448
P + LI F + ++E A + M+ + ++ DN Y++LI+AL + + +E
Sbjct: 618 TVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEE 677
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF---KSFPG 503
A + + M + G P+ +++ LV+ +++EA + G+++ KSF G
Sbjct: 678 AFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGVNWQGNKSFHG 735
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 209/478 (43%), Gaps = 24/478 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD-- 62
G +P+ L+N+++ + AY +M+ C P YNI I IC +
Sbjct: 107 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSP 166
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGF----CNAKRVAEVFRVLEIMKERNVCPNEATV 118
+ L L +++ G A N + + F C + + F++++ M + P+ +T
Sbjct: 167 DLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTY 226
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMG 177
++ + KAF LL + M+ +T + T+L + +A + +M
Sbjct: 227 SKVITFLCHATKVEKAF-LLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 285
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-- 235
G P T+ + + + + I + G +P TY L++ L KAG
Sbjct: 286 SVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNIS 345
Query: 236 --------------DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+ D Y + L NV +Y ++D CK + +D A E+ M
Sbjct: 346 KAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM 405
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
PN + ++ LI G CK ++ +E+ + + +CG+ P T+ S+ID + + R
Sbjct: 406 LSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRL 465
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+ A+ LS+M++ PN +TY +I LC IG+ ++L+L M+ SP++ T+ AL
Sbjct: 466 DLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 525
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
I + KI+ + F M G P+ +Y LI L +G D+A+ M+Q
Sbjct: 526 IDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 583
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/508 (22%), Positives = 220/508 (43%), Gaps = 22/508 (4%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y ++ +K + M + C P+ +N L+H C A +L
Sbjct: 75 PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 134
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVA--EVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ +M G P Y I I C +++ ++ + E + + N + V
Sbjct: 135 LNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANF 194
Query: 126 FRCL----DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
RCL KAF+L+ M + + + ++ L + + +A + ++M G
Sbjct: 195 ARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGV 254
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P+ T+ + + + + + G P TY L+ A KA + + +
Sbjct: 255 TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAND 314
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM---------------RDRD- 285
+ + N +Y ++D CK + +A E+ ++ DR
Sbjct: 315 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 374
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
+APN+VT+ L+ G CK +V ELL +L G +P+ ++++ID C+A + + A
Sbjct: 375 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 434
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+ +M + G P+ TY LI + G + ++++ +M D +P++ T+ A+I
Sbjct: 435 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 494
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
CR+ + EKA K M G P+ +Y+ALI L K+G+ D + F M + GC+P+
Sbjct: 495 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 554
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKE 493
T +++ L G ++A ++ K+
Sbjct: 555 VTYRVLINHLCAAGLLDKARLLLGEMKQ 582
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/514 (23%), Positives = 230/514 (44%), Gaps = 30/514 (5%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
T L +I L++++ D A +M + C P+ TY L+ G + + R++
Sbjct: 42 TVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIIN 101
Query: 70 QMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
M G PN + L+ +CN K A +++L M CP V ++ G
Sbjct: 102 MMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG-CPPGYVVYNIFIGSICGQ 160
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA---------SEAAAILRKMGDRG 180
+ + +LL + + + L N +L +++ + A +A ++++M +G
Sbjct: 161 EKLPSPDLLD--LAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKG 218
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
++P++ST+ +T L + + + GV P TY +L+++ KAG +E
Sbjct: 219 FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL-IEQA 277
Query: 241 RYLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
++L + S V +Y +I + K + +A +I M D PN VT+ L+ G
Sbjct: 278 QWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDG 337
Query: 300 HCKDAEVHKTRELLVMLLECG----------------FKPDKFTFNSMIDCLCRAHRFED 343
CK + K E+ L+ P+ T+ +++D LC+AH+ +
Sbjct: 338 LCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDH 397
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A + L M+ G PN I Y+ LI C G + + +F +M P ++T+ +LI
Sbjct: 398 AHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLID 457
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ +++ A K ML P+ +Y+A+I L + G ++A + ME+ GC+P
Sbjct: 458 RMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSP 517
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ T +++ L + G+ + + D+ +G S
Sbjct: 518 NVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCS 551
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/508 (22%), Positives = 211/508 (41%), Gaps = 54/508 (10%)
Query: 44 DRFTYNILIHGICRIG--------------------------------VVDEALRLVKQM 71
DRFT H +C+ G DEA+ + +M
Sbjct: 9 DRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRM 68
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
PNV TY L+ GF K++ R++ +M PN + SLVH D
Sbjct: 69 RCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDY 128
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLL------YRLSNNSMASEAAAILRKMGDRGYLPES 185
A++LL R +V N + +L + + A I +M +
Sbjct: 129 AYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNK 188
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
CL ++ ++ +++G P STY ++ L A + +
Sbjct: 189 VNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQE 248
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + +V +Y ++ID FCK ++++A + EMR +P +VT+ LI + K +
Sbjct: 249 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 308
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV------------- 352
V + ++ +++ G +P+ T+ +++D LC+A A + ++++
Sbjct: 309 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP 368
Query: 353 ---EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
+ PN +TY L+ LC V + L M + P+ ++ALI FC+
Sbjct: 369 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 428
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
KI+ A++ F M G P +Y++LI + K GR D A + M ++ C P+ T
Sbjct: 429 KIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYT 488
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGIS 497
+++ L + G E+A ++ +E+G S
Sbjct: 489 AMIDGLCRIGESEKALKLLSLMEEKGCS 516
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 70/165 (42%), Gaps = 5/165 (3%)
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE-WGVPPNTITYNILIRSLCAIGDV 376
E GF D+FT LC+ R+ DALD M+E +T+ +I L
Sbjct: 3 ESGFCMDRFTVGCFAHALCKEGRWADALD----MIEREDFKLDTVLCTHMISGLMEASYF 58
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
++ +M+ + P++ T+ L+ F + ++ ++ M+T G P+ +++L
Sbjct: 59 DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 118
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ + + A + M GC P N+ + ++ Q +
Sbjct: 119 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKL 163
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 207/443 (46%), Gaps = 5/443 (1%)
Query: 58 IGVVDEALRLVKQM--EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNE 115
IG + EA+ ++ M +GL V IL+ + V V + M R V P+
Sbjct: 187 IGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAA--EMRLVEYAGNVFDEMSARGVYPDS 244
Query: 116 ATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
T + ++ G R + +A + MER + ++ S+ + A K
Sbjct: 245 CTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHK 304
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
+ G P + ++ L + + +L+ +K G KP T+ L+ L K G
Sbjct: 305 VTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGW 364
Query: 236 DVEGDR-YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
R +L + D NV++Y +I +CK + RA + M+++ + PN T+
Sbjct: 365 TERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYT 424
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
TLI GHCK K EL+ ++ GF P+ T+NS++D LC+ R E+A L+ +
Sbjct: 425 TLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQN 484
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
+ + +TY ILI C D+ ++L KM PDI+ + LI +FCR N ++ +
Sbjct: 485 QIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDS 544
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
EK F ++ LGL P +Y+++I + + A + F M +GC PDS + ++
Sbjct: 545 EKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISG 604
Query: 475 LVQQGRFEEAHDIVKTSKERGIS 497
L ++ R +EA + T ++G+S
Sbjct: 605 LCKESRLDEARQLYDTMIDKGLS 627
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 207/447 (46%), Gaps = 39/447 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ +G+SP+ Y+++I L K S+ A+ ++M + KP+ +T+ LIHG+C+ G
Sbjct: 305 VTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGW 364
Query: 61 VDEALRL-VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+ A RL +K + Y PNV+TYT +I G+C ++++ + E MKE+ + PN T
Sbjct: 365 TERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYT 424
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+L+ G + + KA+EL + M +
Sbjct: 425 TLIDGHCKAGNFSKAYEL-----------------------------------MELMSNE 449
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G+ P + T++ V L E +L+T + ++ TY +L+ K +
Sbjct: 450 GFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQA 509
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+LN +FK +++ Y +I FC+ NMM + ++ E+ +AP T+ ++I G
Sbjct: 510 LVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICG 569
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+C++ +V + + + G PD ++ ++I LC+ R ++A M++ G+ P
Sbjct: 570 YCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPC 629
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+T L C D A ++ + +++ I T + LI+ C K+ A F
Sbjct: 630 EVTRVTLTYEYCKTEDFASAMVILERLNKKLW---IRTVHTLIRKLCCEKKVALAALFFH 686
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRF 446
+L + D + +A A I+S ++
Sbjct: 687 KLLDKEVNVDRVTLAAFNTACIESNKY 713
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 192/464 (41%), Gaps = 44/464 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ +TR+ N +I + ++ A F +MS PD TY +I G CR G V EA
Sbjct: 204 GLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEA 263
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R + +M G+ + T T++I FC V + + + PN S++ G
Sbjct: 264 DRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISG 323
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AFELL +M G+ P
Sbjct: 324 LCKRGSVKQAFELL-----------------------------------EEMVKNGWKPN 348
Query: 185 SSTFDYTVTCLVTGL-DLNETCGILDTFIK----RGVKPRFSTYLLLMEALYKAGRDVEG 239
YT T L+ GL T F+K KP TY ++ K +
Sbjct: 349 V----YTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRA 404
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + + LV N N+Y +ID CK +A E+ M + PN T+N+++ G
Sbjct: 405 EMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDG 464
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK + +LL + + D T+ +I C+ AL L++M + G P+
Sbjct: 465 LCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPD 524
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
Y LI + C + S +LF ++ ++P T+ ++I +CR K+ A K F
Sbjct: 525 IHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQ 584
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
M G PD+ SY ALI L K R DEA+Q + +M G +P
Sbjct: 585 KMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSP 628
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 222/491 (45%), Gaps = 9/491 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G PS R N +++ LV+S +A + + QM + PD FT I+ CR G V +
Sbjct: 177 VGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQ 236
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ V++MEG+G N+ Y ++D +C + R+LE ++ + + PN T LV
Sbjct: 237 AVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVK 296
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS-----EAAAILRKMGD 178
G C D E R ++ T +V + + Y + N +A + +M D
Sbjct: 297 GY--CKDGR--MEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRD 352
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G ++ + L + E +L G++P +Y L++ + G +
Sbjct: 353 AGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRK 412
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ ++ L + +YN ++ FC ++ +D A + M R +APN ++ +TL+
Sbjct: 413 AFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLD 472
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G K + + L L G + TFN++I+ LC+ R +A + L M E PP
Sbjct: 473 GLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPP 532
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+++TY L C +G + + L KM+ +P + FN+ I + K
Sbjct: 533 DSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIH 592
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M GL P+ +Y ALI K G EA + M NG NP+ + + ++ ++
Sbjct: 593 SEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKE 652
Query: 479 GRFEEAHDIVK 489
G+ +EA+ +++
Sbjct: 653 GKVDEANLVLQ 663
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/517 (24%), Positives = 225/517 (43%), Gaps = 61/517 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + +YN +I+ L K ++ Q+M +PD+++YN LI G CR G + +A
Sbjct: 354 GIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKA 413
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + M G A TY L+ GFC+ + + R+ +M +R V PNE + +L+ G
Sbjct: 414 FEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDG 473
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F+ +A L + R + NT++ L +EA +L +M + P+
Sbjct: 474 LFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPD 533
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S T+ + D + K G + T LM + G
Sbjct: 534 SLTYRT----------------LFDGYCKLG---QLGTATHLMNKMEHLG---------- 564
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+V +N I + +I EM R ++PNLVT+ LI+G CK+
Sbjct: 565 ------FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEG 618
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN----- 359
+H+ L ++ G P+ F ++++ C + + ++A L ++V + P
Sbjct: 619 NLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSIST 678
Query: 360 ---------------------TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+ +N++I LC G +A + LF+ ++ R PD +T+
Sbjct: 679 IEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTY 738
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
++LI I++A ML+ GL P+ +Y++LI L KSG+ A F ++
Sbjct: 739 SSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQS 798
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G +P+ T N +++ ++G+ EA + + E G
Sbjct: 799 KGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG 835
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 130/521 (24%), Positives = 227/521 (43%), Gaps = 29/521 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKPDRFTYNILIHGICRIGVVDE 63
G+SP+ Y ++ K ++ A ++M D Y ++I+G C+ G +D+
Sbjct: 283 GLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDD 342
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A R+ +M G N++ Y +I+G C R+ EV +VL+ M++ + P++ + +L+
Sbjct: 343 ATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLID 402
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQK-LVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G R KAFE+ R M R L L NTLL + +A + M RG
Sbjct: 403 GYCREGSMRKAFEM-CRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVA 461
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P + + L + + + RG+ T+ ++ L K GR E +
Sbjct: 462 PNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEEL 521
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L+ + + R + +Y + D +CK+ + AT + +M AP++ FN+ I+GH
Sbjct: 522 LDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFI 581
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ HK ++ + G P+ T+ ++I C+ +A + EMV G+ PN
Sbjct: 582 AKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFI 641
Query: 363 YNILIRSLCAIGDVARSLRLFQKM--------------QADRISPDIYT----------- 397
+ L+ G V + + QK+ + D+IS + T
Sbjct: 642 CSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANV 701
Query: 398 -FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
+N +I C+ +I A+ F S+ PDNF+YS+LI SG DEA M
Sbjct: 702 MWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVM 761
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G P+ T N ++ L + G+ A ++ + +GIS
Sbjct: 762 LSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGIS 802
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 202/428 (47%), Gaps = 10/428 (2%)
Query: 82 TYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF 141
++ +L+ +A +++ V + M + P+ + L++ + + DP A + +
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM 209
Query: 142 MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
L + + + ++A + +M G + + C G+
Sbjct: 210 RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYC-GMGW 268
Query: 202 NETCG-ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK--DRLVSNVNSY 258
E IL++ ++G+ P TY LL++ K GR E +R + + + D +V V +Y
Sbjct: 269 TEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEV-AY 327
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
M+I+ +C+ MD AT + EMRD I NL +NT+I+G CK + + +++L + +
Sbjct: 328 GMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMED 387
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
G +PDK+++N++ID CR A + MV G+ T+TYN L++ C++ +
Sbjct: 388 VGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDD 447
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+LRL+ M ++P+ + + L+ + K E+A + L GL + +++ +I
Sbjct: 448 ALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVIN 507
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS- 497
L K GR EA++ M++ C PDS T + + + G+ A ++ + G +
Sbjct: 508 GLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAP 567
Query: 498 ----FKSF 501
F SF
Sbjct: 568 SVEMFNSF 575
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 106/249 (42%), Gaps = 36/249 (14%)
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKT-------------------RELLVMLLE------ 318
RD + V+F+ L+ H ++ LL L++
Sbjct: 142 RDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGM 201
Query: 319 ----------CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
G PD+FT M CR R A++ + EM G+ N + Y+ ++
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMD 261
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG-LR 427
C +G + R+ + +Q +SP++ T+ L++ +C+ ++E+AE+ M G +
Sbjct: 262 CYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIV 321
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
D +Y +I + GR D+A + M G + + + N ++ L + GR EE +
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381
Query: 488 VKTSKERGI 496
++ ++ G+
Sbjct: 382 LQEMEDVGM 390
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 124/314 (39%), Gaps = 45/314 (14%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+SP+ Y A+I K ++ A + +M + P+ F + L+ + G
Sbjct: 595 MSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGK 654
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID--------------------------GFCNAK 94
VDEA +++++ + P TI ID G C +
Sbjct: 655 VDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSG 714
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCN 154
R+A+ + E ++ + P+ T SL+HG +AF L + + N
Sbjct: 715 RIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYN 774
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
+L+Y L + S A + K+ +G P T++ ++D + K
Sbjct: 775 SLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNT----------------LIDEYCKE 818
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G + + L + + + G E + L+ + ++ + N +Y +I + K M+
Sbjct: 819 G---KTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEI 875
Query: 275 TEICREMRDRDIAP 288
+++ EM R + P
Sbjct: 876 SKLYDEMHIRGLLP 889
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 88/222 (39%), Gaps = 48/222 (21%)
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP--PN-----------TITYNILIR 368
+P + ++ L RA RF DA LS + P P+ +++++L+R
Sbjct: 97 RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLR 156
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
+ G ++ +L +F M P + + N L+ + A + M G+ P
Sbjct: 157 AHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLP 216
Query: 429 DNFSYSALIKALIKSGRF-----------------------------------DEAKQTF 453
D F+ + + KA + GR ++A++
Sbjct: 217 DEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRIL 276
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
S+++ G +P+ T L+++ + GR EEA +VK KE G
Sbjct: 277 ESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG 318
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 234/501 (46%), Gaps = 10/501 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ G+SP+ +YNA+ID+L K + D A L F +M P+ TY+ILI CR G
Sbjct: 358 VAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGK 417
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+D AL + +M +G P+VY Y LI+G C ++ ++ M + + P T S
Sbjct: 418 LDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTS 477
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G +KA L + + TLL L + +A + +M +
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWN 537
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P T++ + ++++ L+ I++G+ P +Y L+ L G+ E
Sbjct: 538 VKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+++ + K N Y ++ FC+ ++ A +C++M R + +LV + LI G
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGS 657
Query: 301 CKDAEVHKTRELLVMLL----ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
K HK R++ + LL + G KPD + SMID + F++A M+ G
Sbjct: 658 LK----HKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGC 713
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR-MNKIEKAE 415
PN +TY +I LC G V + L KM+ P+ T+ + + + ++KA
Sbjct: 714 VPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAV 773
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ ++L GL + +Y+ LI+ + GR +EA + M +G +PD T ++ L
Sbjct: 774 ELHNAILK-GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISEL 832
Query: 476 VQQGRFEEAHDIVKTSKERGI 496
++ ++A ++ + E+GI
Sbjct: 833 CRRNDVKKAIELWNSMTEKGI 853
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 220/487 (45%), Gaps = 9/487 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P R +A++ LVK LA F M +PD + Y +I +C + + A +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ QME G N+ Y +LIDG C ++V E + + + + + P+ T +LV G+ +
Sbjct: 250 IVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCK 309
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ E++ + + ++L+ L EA +++++ + G P
Sbjct: 310 VQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFV 369
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + L G + +E + D K G+ P TY +L++ + G+ +L +
Sbjct: 370 YNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMI 429
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
L +V YN +I+ CK + A + EM ++ + P +VT+ +L+ G+C +++
Sbjct: 430 DMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
K L + G P +TF +++ L RA DA+ +EM EW V PN +TYN++I
Sbjct: 490 KALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMI 549
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG-L 426
C G+++++ +M I PD Y++ LI C + +A K F L G
Sbjct: 550 EGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNC 608
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ-------G 479
+ Y+ L+ + G+ +EA M G + D ++++ ++ G
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLG 668
Query: 480 RFEEAHD 486
+E HD
Sbjct: 669 LLKEMHD 675
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/471 (24%), Positives = 192/471 (40%), Gaps = 70/471 (14%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ PS YN++I+ K I A +M + +P TY L+ G C G +++
Sbjct: 431 MGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
ALRL +M G G P++YT+T L+ G A + + ++ M E NV PN T ++
Sbjct: 491 ALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIE 550
Query: 124 GVFRCLDPHKAFELLIRFMER---------EPLTQKL----------------------- 151
G + KAFE L +E+ PL L
Sbjct: 551 GYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 152 --VCNT-LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
+C T LL+ EA ++ + MG RG + + + + D G+L
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLL 670
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
RG+KP Y +++A K G E + + + V N +Y VI+ CK
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Query: 269 NMMDRATEICREMRDRDIAPNLVTF----------------------------------- 293
++ A +C +MR + PN VT+
Sbjct: 731 GFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATY 790
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
N LI G C+ + + EL+ ++ G PD T+ +MI LCR + + A++ + M E
Sbjct: 791 NMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTE 850
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
G+ P+ + YN LI C G++ ++ L +M + P+ T I +
Sbjct: 851 KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTISN 901
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/500 (21%), Positives = 209/500 (41%), Gaps = 35/500 (7%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRI-------------- 58
YN +ID L K + A + ++ + KPD TY L+ G+C++
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEML 324
Query: 59 ---------------------GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVA 97
G V+EAL LVK++ G +PN++ Y LID C +
Sbjct: 325 RLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFD 384
Query: 98 EVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL 157
E + + M + +CPN+ T L+ R A L ++ N+L+
Sbjct: 385 EAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLI 444
Query: 158 YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK 217
S A +++ +M ++ P T+ + + +N+ + +G+
Sbjct: 445 NGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIV 504
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
P T+ L+ L++AG + + + + + N +YN++I+ +C+ M +A E
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEF 564
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
EM ++ I P+ ++ LI G C + + + + L + + ++ + ++ CR
Sbjct: 565 LNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
+ E+AL +M GV + + Y +LI D L L ++M + PD
Sbjct: 625 EGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVI 684
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+ ++I + + ++A + M+ G P+ +Y+A+I L K+G +EA+ M
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMR 744
Query: 458 QNGCNPDSYTSNLILETLVQ 477
P+ T L+ L +
Sbjct: 745 PGNSVPNQVTYGCFLDILTK 764
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 182/426 (42%), Gaps = 2/426 (0%)
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
V+D L M + P V T + L+ G + + + M + P+
Sbjct: 172 VLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYT 231
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV-CNTLLYRLSNNSMASEAAAILRKMGD 178
++ + D +A E++++ ME +V N L+ L EA I + +
Sbjct: 232 GVIRSLCELKDLSRAKEMIVQ-MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAG 290
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+ P+ T+ V L + ++D ++ P + L+E L K G+ E
Sbjct: 291 KELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEE 350
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ V + + N+ YN +ID CK D A + M + PN VT++ LI
Sbjct: 351 ALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILID 410
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
C+ ++ L +++ G KP + +NS+I+ C+ A ++EM+ + P
Sbjct: 411 MFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEP 470
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+TY L+ C+ G + ++LRL+ +M I P IYTF L+ R I A K F
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M ++P+ +Y+ +I+ + G +A + M + G PD+Y+ ++ L
Sbjct: 531 TEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLT 590
Query: 479 GRFEEA 484
G+ EA
Sbjct: 591 GQASEA 596
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 122/255 (47%)
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K L+ V + + ++ K A E+ +M + I P++ + +I C+ ++
Sbjct: 185 KVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLS 244
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ +E++V + G + +N +ID LC+ + +A+ ++ + P+ +TY L+
Sbjct: 245 RAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLV 304
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC + + L + +M R SP ++L++ + K+E+A + G+
Sbjct: 305 CGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVS 364
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P+ F Y+ALI +L K FDEA+ F M + G P+ T +++++ ++G+ + A
Sbjct: 365 PNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSF 424
Query: 488 VKTSKERGISFKSFP 502
+ + G+ +P
Sbjct: 425 LGEMIDMGLKPSVYP 439
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP Y +I L + N + A + M+ +PDR YN LIHG C G + +A
Sbjct: 817 GVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKA 876
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAK 94
L +M G PN T I ++K
Sbjct: 877 TELRNEMLRQGLKPNTETSETTISNDSSSK 906
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 233/484 (48%), Gaps = 19/484 (3%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N + LV+ +D A +S P NILI +C G V +A R+V E
Sbjct: 65 NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVV---EA 121
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG--VFRC-LD 130
LG + + TY +++G+C A + R+++ + P+ T L+ V C LD
Sbjct: 122 LGPSATIITYNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIRALCVRGCVLD 178
Query: 131 PHKAFE-LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
F+ +L R +T + LL S +A +L +M +G P+ T++
Sbjct: 179 ALAVFDDMLHRGCSPSVVTYSI----LLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYN 234
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
+ + + D+ E +L++ G KP TY ++++L + R E D+ L +F +
Sbjct: 235 VLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSN 294
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
+ ++N VI C+ + RAT++ +M + P+++T+++++ G CK+ V +
Sbjct: 295 DCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEA 354
Query: 310 ----RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ELL ++ PD+ TFN++I LC+ F+ A+ + EM E G P+ TYN
Sbjct: 355 IKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNC 414
Query: 366 LIRS-LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++ LC +L L M ++ + PD T+ +L R +++E+A F + +
Sbjct: 415 IVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAM 474
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL PD Y+A++ L K R D A F M NGC PD T +++E + +G EEA
Sbjct: 475 GLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEA 534
Query: 485 HDIV 488
+++
Sbjct: 535 KELL 538
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 186/421 (44%), Gaps = 8/421 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ LG S + YN +++ ++ +ID A + PD FTYN LI +C G
Sbjct: 119 VEALGPSATIITYNTMVNGYCRAGNIDAARRMIDSVPF---APDTFTYNPLIRALCVRGC 175
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V +AL + M G +P+V TY+IL+D C + +L+ M+ + P+ T
Sbjct: 176 VLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNV 235
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L++ + D +A ++L + +L L ++ EA +L KM
Sbjct: 236 LINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSND 295
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ TF+ +T L + +L + G P TY +M+ L K R E
Sbjct: 296 CAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAI 355
Query: 241 RYLNHVFKDRLVSNV----NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
+ L + + + N ++N +I C+ + DRA ++ EM + P++ T+N +
Sbjct: 356 KLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCI 415
Query: 297 ISGH-CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
+ G CK + + +LL +++ G PD T+ S+ L R E A+ + G
Sbjct: 416 VDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMG 475
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ P+ + YN ++ LC ++ F M ++ PD T+ L++ +E+A+
Sbjct: 476 LSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAK 535
Query: 416 K 416
+
Sbjct: 536 E 536
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 189/454 (41%), Gaps = 46/454 (10%)
Query: 49 NILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
N + G+ + G +D ALRLV + G G P V ILI C RVA+ RV+E +
Sbjct: 65 NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGP 124
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE 168
T ++V+G R A
Sbjct: 125 SATI---ITYNTMVNGYCR--------------------------------------AGN 143
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A R + + P++ T++ + L + + + D + RG P TY +L++
Sbjct: 144 IDAARRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLD 203
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
A K + L+ + ++ +YN++I+ C + A ++ + P
Sbjct: 204 ATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKP 263
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+ VT+ ++ C + +LL + PD+ TFN++I LC+ A L
Sbjct: 264 DAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVL 323
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS----PDIYTFNALIQS 404
++M E G P+ ITY+ ++ LC V +++L +++ A+ +S PD TFN +I S
Sbjct: 324 AQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITS 383
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA-LIKSGRFDEAKQTFLSMEQNGCNP 463
C+ ++A K M G PD +Y+ ++ L KS + +EA M NG P
Sbjct: 384 LCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCP 443
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
D+ T + L ++ E A + + + G+S
Sbjct: 444 DTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLS 477
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 148/309 (47%), Gaps = 8/309 (2%)
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
LV +L+ ++ + G P +L++ L GR + +R + + +
Sbjct: 71 LVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGPS---AT 127
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDR-DIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+ +YN +++ +C+ +D A R M D AP+ T+N LI C V +
Sbjct: 128 IITYNTMVNGYCRAGNIDAA----RRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVF 183
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+L G P T++ ++D C+ ++ A+ L EM G P+ +TYN+LI ++C+
Sbjct: 184 DDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQ 243
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
GDV +L++ + + PD T+ +++S C + E+A+K M + PD ++
Sbjct: 244 GDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTF 303
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+A+I +L + G A + M ++GC PD T + I++ L ++ R +EA ++K
Sbjct: 304 NAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLA 363
Query: 494 RGISFKSFP 502
+S P
Sbjct: 364 EMVSKNCIP 372
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ +G+SP LYNA++ L K DLA F M + C PD TY IL+ GI G
Sbjct: 471 VQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGF 530
Query: 61 VDEALRLVKQM 71
++EA L+ +
Sbjct: 531 LEEAKELLGNL 541
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 202/427 (47%), Gaps = 5/427 (1%)
Query: 2 SFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
+G P+T + +I L I A L + + D+ Y LIHG+C++G
Sbjct: 119 QLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGET 178
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
AL L+++++G PNV Y+ +IDG C K V + F + M + + PN T +L
Sbjct: 179 RAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL 238
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ G F A +L + + N L+ + E + M +G
Sbjct: 239 ISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGI 298
Query: 182 LPESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
P T+ + CLV ++N+ IL T +RGV P +Y +L++ K + E
Sbjct: 299 KPNVVTYCSLMDGYCLVK--EVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEA 356
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ ++ +V +YN +ID CK+ + A ++ EM DR + P+++T+++++
Sbjct: 357 MNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDA 416
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK+ +V K LL L + G +P+ +T+ +ID LC+ R EDA + +++ G
Sbjct: 417 LCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNIT 476
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
TY ++I C G +L L KM+ + PD T+ +I+S ++ +KAEK
Sbjct: 477 VNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEK-LR 535
Query: 420 SMLTLGL 426
M+T GL
Sbjct: 536 EMITRGL 542
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 216/478 (45%), Gaps = 19/478 (3%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P +N ++ +LVKS QQM + P F +
Sbjct: 73 TPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQ----------------- 115
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+ +GY PN T+T LI G C ++ + + + ++ +L+HG+
Sbjct: 116 --HPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLC 173
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + A +LL R ++ +T++ + + ++A + +M +G P
Sbjct: 174 KVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVV 233
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ ++ T L + + + I +KP T+ +L++ K G+ EG +
Sbjct: 234 TYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMM 293
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K + NV +Y ++D +C V +++A I M R + P++ ++N LI G CK +V
Sbjct: 294 MKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKV 353
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ L + PD T+NS+ID LC+ + AL + EM + GVPP+ ITY+ +
Sbjct: 354 DEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSI 413
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ +LC V +++ L K++ I P++YT+ LI C+ ++E A F +L G
Sbjct: 414 LDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGY 473
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+Y+ +I G FDEA M+ N C PD+ T +I+ +L + ++A
Sbjct: 474 NITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKA 531
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 187/413 (45%), Gaps = 51/413 (12%)
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY--- 190
AF L R + + P + N +L L + ++ ++M G P F +
Sbjct: 60 AFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQ 119
Query: 191 ---------TVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG--- 234
T T L+ GL +++ D + G + Y L+ L K G
Sbjct: 120 LMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETR 179
Query: 235 ------RDVEG-------------------DRYLNHVFK--DRLVS-----NVNSYNMVI 262
R V+G D+++N F +VS NV +Y+ +I
Sbjct: 180 AALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 239
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
F V + A ++ +M +I P++ TFN L+ G CKD ++ + + + M+++ G K
Sbjct: 240 SGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIK 299
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P+ T+ S++D C A L M + GV P+ +YNILI C I V ++ L
Sbjct: 300 PNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNL 359
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
F++M I PD+ T+N+LI C++ KI A K M G+ PD +YS+++ AL K
Sbjct: 360 FKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCK 419
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ + D+A ++ G P+ YT ++++ L + GR E+AH+I + +G
Sbjct: 420 NHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKG 472
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 35/244 (14%)
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF-------------------------- 321
PN +TF TLI G C ++H+ ++ GF
Sbjct: 125 PNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDL 184
Query: 322 ---------KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+P+ ++++ID +C+ DA D SEMV G+ PN +TY+ LI
Sbjct: 185 LRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFT 244
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
+G + ++ LF KM + I PD+YTFN L+ FC+ K+++ + F M+ G++P+ +
Sbjct: 245 VGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVT 304
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y +L+ ++AK +M Q G NPD + N++++ + + +EA ++ K
Sbjct: 305 YCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMH 364
Query: 493 ERGI 496
+ I
Sbjct: 365 HKHI 368
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/527 (23%), Positives = 235/527 (44%), Gaps = 36/527 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN +ID K +D AY F +M PD TYN LI G+C+ + ++
Sbjct: 152 GLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKS 211
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R+++QM G PN TY LI G+ A E RV + M + P S +H
Sbjct: 212 ERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHA 271
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R +A ++ + + P + +TLL+ + + +++ M +G +P
Sbjct: 272 LCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPN 331
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F+ + +++ I + +G+ P T+ ++ +L + GR + N
Sbjct: 332 HRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFN 391
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA----------------- 287
H+ + + Y +I C + +A E+ EM ++DI
Sbjct: 392 HMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKE 451
Query: 288 -------------------PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
PN+VTFN+L+ G+C + + LL + G +P+ + +
Sbjct: 452 GRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 511
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+++D C+ R +DAL +M+ GV P ++ YNI++ L + ++F +M
Sbjct: 512 GTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIE 571
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ I T+ ++ CR N ++A + + ++ D +++ +I A++K GR E
Sbjct: 572 SGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQE 631
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
AK+ F ++ G P +T NL++ L+++ +EEA ++ + ++ G
Sbjct: 632 AKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSG 678
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 126/492 (25%), Positives = 215/492 (43%), Gaps = 36/492 (7%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ YN +ID + + +LA F ++ PD +YN LI G + G VD+A
Sbjct: 119 APTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYE 178
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L +M +P+V TY LIDG C K + + RVLE M + + PN T SL++G
Sbjct: 179 LFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYG-- 236
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
S M E+ + ++M G +P
Sbjct: 237 ---------------------------------YSTAGMWKESVRVFKEMSSSGLIPCVV 263
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ + L + E I D+ + +G KP +Y L+ G + +N +
Sbjct: 264 NCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLM 323
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+V N +N++I+ + + MMD+A I +M+++ + P+ VTF T+IS C+ +
Sbjct: 324 VSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 383
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY-NI 365
+++ G P + + +I C A + +SEM+ +PP + Y +
Sbjct: 384 DDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 443
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+I +L G VA + M P++ TFN+L++ +C + +E+A +M ++G
Sbjct: 444 IINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 503
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ P+ + Y L+ K+GR D+A F M G P S N+IL L Q R A
Sbjct: 504 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAK 563
Query: 486 DIVKTSKERGIS 497
+ E G +
Sbjct: 564 KMFHEMIESGTT 575
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 148/381 (38%), Gaps = 36/381 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ R +N +I+A + +D A L F+ M PD T+ +I +CRIG +D+A
Sbjct: 327 GIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 386
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCN------AK------------------------ 94
L M +G P+ Y LI G CN AK
Sbjct: 387 LHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 446
Query: 95 ------RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
RVAE ++++M + PN T SL+ G + +AF LL
Sbjct: 447 NLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEP 506
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
+ TL+ N +A + R M +G P S ++ + L +
Sbjct: 507 NCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMF 566
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
I+ G TY +++ L + E + L +F + ++ ++N+VI KV
Sbjct: 567 HEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKV 626
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
A E+ + + P + T+N +IS K+ + L + + + G PD
Sbjct: 627 GRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLL 686
Query: 329 NSMIDCLCRAHRFEDALDCLS 349
N ++ L + A + LS
Sbjct: 687 NHIVRMLLKKAEVAKASNYLS 707
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 118/311 (37%), Gaps = 35/311 (11%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P + ++++I+ L K + M +P+ T+N L+ G C +G ++EA L
Sbjct: 436 PGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 495
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ M +G PN Y Y L+DG+C R+ + V M + V P ++HG+F+
Sbjct: 496 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQ 555
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
A ++ +E +L L N+ EA +L K+
Sbjct: 556 ARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKL----------- 604
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
VK T+ +++ A+ K GR E +
Sbjct: 605 ------------------------FAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAIS 640
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
LV V++YN++I K + A + + AP+ N ++ K AEV
Sbjct: 641 TYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVA 700
Query: 308 KTRELLVMLLE 318
K L ++ E
Sbjct: 701 KASNYLSIIDE 711
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 220/467 (47%), Gaps = 35/467 (7%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
T YN +++ L KS D Y + M C P+ +TY L+ +C+ +EA +
Sbjct: 16 GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
+ M G +PNV++Y+ILI G C ++V E +L M + PN T SL+ G+ +
Sbjct: 76 RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+A +L R + R +V N L+ S EA + +M ++G +P T+
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ +L F ++G R +++L+K + +
Sbjct: 196 N----------------SLLSGFSRKGEFGR-------VQSLFK------------DMLR 220
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
V N+ ++N ++D FCK+ M A + EMR P++V++NTL+ G C + H+
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHE 280
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+ LL ++ G PD ++N +ID ++ + A+ E+ + G+ P+ +Y+ +I
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
LC G V + +F+ M A+ +PD L+ CR ++ ++ + F +M+ P
Sbjct: 341 CLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVP 400
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
Y+ L+ L K+ R D+ + F + + G +PD S +ILETL
Sbjct: 401 LIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 191/452 (42%), Gaps = 35/452 (7%)
Query: 46 FTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEI 105
+YN L+ + + G D M G G PN YTY L+ C A+R E V
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 106 MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSM 165
M + PN + L+ G+ R QK+
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCR--------------------GQKV-------------- 103
Query: 166 ASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLL 225
EAA +L +M D G+ P T+ ++ L L E + + RG P Y +
Sbjct: 104 -DEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162
Query: 226 LMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
L++ K G E R + + + V +YN ++ F + R + ++M +
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
PN+ TFN L+ G CK ++ + L + + G PD ++N+++ +C + +A
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQ 282
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
L EM+ GV P+ ++YNILI G + +++LF ++ + PD ++++ +I
Sbjct: 283 RLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCL 342
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
CR K+ A F M+ G PD L+ L + R E+ + F +M + C P
Sbjct: 343 CRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLI 402
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
NL++ L + R ++ +I ERG S
Sbjct: 403 PEYNLLMYKLCKAKRSDDVCEIFHELTERGFS 434
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 182/411 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+T Y ++ +L ++ + A F+ M+ C P+ F+Y+ILI G+CR VDEA
Sbjct: 47 GCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEA 106
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M G+ PNV TY L+ G C ++ E + M R P+ L+ G
Sbjct: 107 AELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDG 166
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D +A+ L +E+ + N+LL S ++ + M +G +P
Sbjct: 167 FSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPN 226
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + D+ E + G P +Y LM + G+ E R L
Sbjct: 227 IFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLR 286
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + ++ SYN++ID + K +D A ++ E+ + P+ +++T+I C+
Sbjct: 287 EMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAG 346
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V + ++ G PD ++ LCR R ++ + MV++ P YN
Sbjct: 347 KVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYN 406
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+L+ LC +F ++ SPD+ ++++ R + E AE
Sbjct: 407 LLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKEAAE 457
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 149/315 (47%)
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+++Y + L + G + + G P TY L+ +L +A R E +
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
NV SY+++I C+ +D A E+ EM D PN+VT+ +L+SG CK ++
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ +L ++ G PD +N +ID + +A EM+E G P TYN L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ G+ R LF+ M P+I+TFN L+ FC+M + +A + F M +LG
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
PD SY+ L++ + G+ EA++ M ++G PD + N++++ + G + A
Sbjct: 259 PPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318
Query: 487 IVKTSKERGISFKSF 501
+ + G+ +F
Sbjct: 319 LFYEIPKSGLEPDAF 333
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 124/289 (42%), Gaps = 2/289 (0%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
+ G P +YN +ID K + AY F++M C P FTYN L+ G R G
Sbjct: 150 YRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFG 209
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
L K M G PN++T+ L+DGFC + E R+ M+ P+ + +L+
Sbjct: 210 RVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLM 269
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
G+ PH+A + L+R M R + +V N L+ S + A + ++ G
Sbjct: 270 RGMCSKGKPHEA-QRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGL 328
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P++ ++ + CL + + I G P + + L+ L + R E
Sbjct: 329 EPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCE 388
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
+ K V + YN+++ CK D EI E+ +R +P++
Sbjct: 389 LFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 235/485 (48%), Gaps = 6/485 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P + ++ +LVK+ + FQ+M + + + T NILI+ C + ++ A +
Sbjct: 47 PPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSV 106
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ LGY P++ TYT LI G C +V E + + + + + + +L++G+ +
Sbjct: 107 FAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCK 166
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
A LL R +E E +V NT++ L + + +A + +M ++ P
Sbjct: 167 IGQTGPALRLL-RKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVV 225
Query: 187 TFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + C+V LD + G+L+ + + V P T+ L++ L K G+ E +
Sbjct: 226 TYTSLIYGFCIVGQLD--KAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVA 283
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K+ + +V +YN ++D + V +A + M + ++ +++ +ISG K
Sbjct: 284 VMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMK 343
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + +L + PD ++S+ID LC++ R AL + EM + G PPN ITY
Sbjct: 344 MLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYT 403
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI +LC V +++ L +K++ I ++YT+N L+ C+ ++ A+K F +L
Sbjct: 404 SLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMK 463
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G D +YS +I L K FDEA ME GC PD+ I+ ++ ++A
Sbjct: 464 GHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKA 523
Query: 485 HDIVK 489
+++
Sbjct: 524 EKLLR 528
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 215/470 (45%), Gaps = 43/470 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ-CKPDRFTYNILIHGICRIGVVD 62
LG P Y +I L + + + L F V Q K D +Y LI+G+C+IG
Sbjct: 113 LGYQPDIITYTTLIRGLCLNGQVKES-LNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTG 171
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
ALRL++++EG P+V Y +IDG C K V + F + M E+ V PN T SL+
Sbjct: 172 PALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLI 231
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G KAF LL N ++ + N
Sbjct: 232 YGFCIVGQLDKAFGLL---------------NEMVLKNVN-------------------- 256
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P TF+ V L + E ++ +K GV P TY LM+ + +
Sbjct: 257 PNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNV 316
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
N + + + +V+SY+++I K+ M+D A ++ MR+ ++ P++V +++LI G CK
Sbjct: 317 FNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCK 376
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ + + + + G P+ T+ S+ID LC++H+ + A+ L ++ + G+ N T
Sbjct: 377 SGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYT 436
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YNIL+ LC G + + ++FQ + + D+ T++ +I C+ + ++A M
Sbjct: 437 YNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKME 496
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM------EQNGCNPDSY 466
G PD +Y +I A + D+A++ M + NG D Y
Sbjct: 497 DKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMIDCVDYKDNGDTCDQY 546
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 193/406 (47%), Gaps = 47/406 (11%)
Query: 133 KAFELLIRFMEREPL----TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
K + ++I +R L + + N L+ + + A ++ K+ GY P+ T+
Sbjct: 63 KHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITY 122
Query: 189 DYTVTCLVTGLDLN----ETCGILDTFIKRGVKPRFSTYLLLMEALYKAG---------R 235
T L+ GL LN E+ D + +G+K +Y L+ L K G R
Sbjct: 123 ----TTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLR 178
Query: 236 DVEGD----------RYLNHVFKDRLV----------------SNVNSYNMVIDCFCKVN 269
+EG+ ++ + KD+LV NV +Y +I FC V
Sbjct: 179 KIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVG 238
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+D+A + EM +++ PN+ TFNTL+ G CK+ ++ + + L+ ++++ G PD FT+N
Sbjct: 239 QLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYN 298
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+++D A + + M + GV + +Y+++I L + + ++ LF+ M+ +
Sbjct: 299 ALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNE 358
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ PD+ +++LI C+ +I A K M G P+ +Y++LI AL KS + D+A
Sbjct: 359 NVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKA 418
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
++ G + YT N++++ L + GR +A + + +G
Sbjct: 419 IALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKG 464
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 125/279 (44%), Gaps = 35/279 (12%)
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
SN + N++I+ +C + ++ A + ++ P+++T+ TLI G C + +V ++
Sbjct: 82 SNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNF 141
Query: 313 LVMLLECGFK-----------------------------------PDKFTFNSMIDCLCR 337
L+ G K PD +N++ID LC+
Sbjct: 142 HDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCK 201
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
DA D EM E V PN +TY LI C +G + ++ L +M ++P++ T
Sbjct: 202 DKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCT 261
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
FN L+ C+ K+ +A+ M+ G+ PD F+Y+AL+ +AK F M
Sbjct: 262 FNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMA 321
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
Q G D ++ ++++ L + +EA D+ + + +
Sbjct: 322 QMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENV 360
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 109/223 (48%)
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
+ M I N +T N LI+ +C +++ + +L+ G++PD T+ ++I LC
Sbjct: 73 QRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLN 132
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+ +++L+ +V G+ + ++Y LI LC IG +LRL +K++ + PD+ +
Sbjct: 133 GQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMY 192
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
N +I C+ + A + M + P+ +Y++LI G+ D+A M
Sbjct: 193 NTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVL 252
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
NP+ T N +++ L ++G+ EA +V + G+ F
Sbjct: 253 KNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVF 295
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 227/489 (46%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P T +N ++ +LVK A + + D T NILI+ C +G + + +
Sbjct: 67 PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ + GY P+V T T LI G C V + + + + + + +L++G+ +
Sbjct: 127 LATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCK 186
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ A +L+ ER ++ N ++ L N + EA + +M + P T
Sbjct: 187 IGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVT 246
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + L E +L+ + + P T+ +L++AL K G+ L +
Sbjct: 247 YTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMM 306
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K + +V +YN ++D + VN + A + M + P + ++ +I G CK V
Sbjct: 307 KAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVD 366
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ L + P+ TFNS+ID LC++ R D + +M + + ITY+ LI
Sbjct: 367 EAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLI 426
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+LC + +++ LF+KM I PD+YT+ LI C+ +++ A++ F +L G
Sbjct: 427 DALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYH 486
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
D +Y+ +I K+G FDEA ME NGC P++ T ++I+ L ++ ++A +
Sbjct: 487 LDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKL 546
Query: 488 VKTSKERGI 496
++ RG+
Sbjct: 547 LREMIARGL 555
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 178/384 (46%), Gaps = 35/384 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
I P +YN +ID+L K+ + A + +M+ Q P+ TY LI+G C +G + EA
Sbjct: 204 SIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEA 263
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M+ P+VYT++ILID ++ VL +M + V P+ T SLV G
Sbjct: 264 VALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDG 323
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F L N A + M G P
Sbjct: 324 YF---------------------------------LVNE--VKHAKYVFNSMAQSGVTPG 348
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + L ++E + + + V P T+ L++ L K+GR ++
Sbjct: 349 VQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVD 408
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +++V +Y+ +ID CK +D+A + ++M ++I P++ T+ LI G CK
Sbjct: 409 KMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGG 468
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +E+ LL G+ D T+ MI C+A F++AL LS+M + G PN IT++
Sbjct: 469 RLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFD 528
Query: 365 ILIRSLCAIGDVARSLRLFQKMQA 388
I+I +L + ++ +L ++M A
Sbjct: 529 IIICALFEKDENDKAEKLLREMIA 552
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 133/279 (47%), Gaps = 4/279 (1%)
Query: 226 LMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
++ +L K R H+ + S++ + N++I+CFC + + + + + R
Sbjct: 75 ILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRG 134
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
P+++T TLI G C EV K + ++ F+ D+ ++ ++I+ LC+ + A+
Sbjct: 135 YHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAI 194
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+ + E + P+ + YNI+I SLC V + L+ +M A +I P++ T+ LI F
Sbjct: 195 QLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGF 254
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
C M + +A M + PD +++S LI AL K G+ AK M + PD
Sbjct: 255 CIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDV 314
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFPGL 504
T N +++ + A + + + G++ PG+
Sbjct: 315 VTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVT----PGV 349
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P + Y +ID L K+ +D A F++M P+ T+N LI G+C+ G +
Sbjct: 344 GVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYV 403
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LV +M +V TY+ LID C + + + + M + + P+ T L+ G
Sbjct: 404 WDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDG 463
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A E+ + + ++ + EA A+L KM D G +P
Sbjct: 464 LCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPN 523
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
+ TFD + L + ++ +L I RG+
Sbjct: 524 AITFDIIICALFEKDENDKAEKLLREMIARGL 555
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 217/482 (45%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ YN VI + ++ A F +M+ P+ TYN +I G + G ++ RL
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
QM G PN TY +L+ G C A R+ E +L+ M + + P+ T L G+ R
Sbjct: 73 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D L ++++ C+ LL L + S A +L+ + + G +P
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + +L R +KP TY L+ L KA R L +
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ + V ++N +ID + + +++ + EM++ + PN+V++ ++++ CK+ ++
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 312
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ +L + P+ +N++ID + A + +M G+ P+ +TYN+LI
Sbjct: 313 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 372
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+ LC ++ + + + R+ PD ++N LI + C I+KA M G++
Sbjct: 373 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 432
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+Y LI L +GR +E + + M QN P + N+++E + G +A D+
Sbjct: 433 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDL 492
Query: 488 VK 489
K
Sbjct: 493 RK 494
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 191/419 (45%)
Query: 78 PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFEL 137
PN ++Y ++I G A R + V + M ER V PN T +++ G + D F L
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72
Query: 138 LIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVT 197
+ + + N LL L E +A+L +M + +P+ T+ L
Sbjct: 73 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132
Query: 198 GLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNS 257
D + ++K GV T +L+ L K G+ + L + LV
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
YN +I+ +C+ ++ A +M+ R I P+ +T+N LI+G CK + ++LL+ +
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
+ G P TFN++ID R + E LSEM E G+ PN ++Y ++ + C G +
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 312
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
++ + M + P+ +NA+I ++ ++A M + G+ P +Y+ LI
Sbjct: 313 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 372
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
K L + EA++ S+ + PD+ + N ++ +G ++A D+ + + GI
Sbjct: 373 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 431
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 185/418 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN ++ L ++ + +M+ + PD FTY+IL G+ R G
Sbjct: 80 GLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAM 139
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L + G YT +IL++G C +V+ VL+ + + P +L++G
Sbjct: 140 LSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLING 199
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + AF + R + N L+ L + A +L +M D G P
Sbjct: 200 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 259
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + L + +L + G+KP +Y ++ A K G+ E L+
Sbjct: 260 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 319
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+F ++ N YN +ID + + D+A + +M+ I+P++VT+N LI G C +
Sbjct: 320 DMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQS 379
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + E++ L PD ++N++I C + ALD M ++G+ TY+
Sbjct: 380 QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYH 439
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
LI L G + L+QKM + + P N +++++ + KAE ML
Sbjct: 440 QLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEML 497
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 167/362 (46%), Gaps = 2/362 (0%)
Query: 138 LIRFMERE--PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCL 195
++R M R+ P N ++ + +A + +M +R LP T++ +
Sbjct: 1 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60
Query: 196 VTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNV 255
+ G DL + D + G+KP TY +L+ L +AGR E L+ + ++V +
Sbjct: 61 IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 120
Query: 256 NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
+Y+++ D + + + + T + L++G CKD +V E+L
Sbjct: 121 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 180
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
L+ G P + +N++I+ C+ E A +M + P+ ITYN LI LC
Sbjct: 181 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 240
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+ + L +MQ + ++P + TFN LI ++ R ++EK M GL+P+ SY +
Sbjct: 241 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 300
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
++ A K+G+ EA M P++ N I++ V+ G ++A +V+ K G
Sbjct: 301 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 360
Query: 496 IS 497
IS
Sbjct: 361 IS 362
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 143/338 (42%)
Query: 16 VIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLG 75
+++ L K + +A Q + P R YN LI+G C+ G ++ A QM+
Sbjct: 161 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 220
Query: 76 YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAF 135
P+ TY LI+G C A+R+ +L M++ V P T +L+ R K F
Sbjct: 221 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 280
Query: 136 ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCL 195
+L E + +++ N EA AIL M + LP + ++ +
Sbjct: 281 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 340
Query: 196 VTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNV 255
V ++ +++ G+ P TY LL++ L + E + +N + RL+ +
Sbjct: 341 VEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 400
Query: 256 NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
SYN +I C +D+A ++ + M I + T++ LISG +++ L
Sbjct: 401 VSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQK 460
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
+++ P N M++ + A D EM++
Sbjct: 461 MMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 498
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 139/538 (25%), Positives = 244/538 (45%), Gaps = 59/538 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T Y+ VI L + ++ A+L FQ+M + PD +TY ILI C+ G++++A
Sbjct: 283 GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQA 342
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++M +G +P V TYT LI + AK+V + + M + PN+ T +LV G
Sbjct: 343 QWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDG 402
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL-P 183
+ + + KAFE+ + + + S + DR L P
Sbjct: 403 LCKAGNISKAFEVYAKLI--------------------GTSDSADSDFYFPCEDRHTLAP 442
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ V L ++ +LD + G +P Y L++ KAG+
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ K + +V++Y +ID K +D A ++ +M PN+VT+ +I G C+
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E K +LL ++ E G P+ T+ ++ID L +A + + +LD ++M G PN +TY
Sbjct: 563 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 622
Query: 364 NILIRSLCAIG--DVAR-------------------------------SLRLFQKMQADR 390
+LI LCA G D AR SL + ++M++
Sbjct: 623 RVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYG 682
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL--GLRPDNFSYSALIKALIKSGRFDE 448
P + LI F + ++E A + M+ + ++ DN Y++LI+AL + + +E
Sbjct: 683 TVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEE 742
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF---KSFPG 503
A + + M + G P+ +++ LV+ +++EA + G+++ KSF G
Sbjct: 743 AFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGVNWQGNKSFHG 800
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 144/615 (23%), Positives = 254/615 (41%), Gaps = 126/615 (20%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG---- 59
G PS YNA++ L + +DL + ++MS DRFT H +C+ G
Sbjct: 34 FGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWAD 93
Query: 60 ----------------------------VVDEALRLVKQMEGLGYAPNVYTYTILIDGFC 91
DEA+ + +M PNV TY L+ GF
Sbjct: 94 ALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFL 153
Query: 92 NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF---------- 141
K++ R++ +M PN + SLVH D A++LL R
Sbjct: 154 KKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYV 213
Query: 142 -----------MEREP------LTQK-----LVCNTLLYRLSNNSMA---------SEAA 170
E+ P L +K L N +L +++ + A +A
Sbjct: 214 VYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAF 273
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
++++M +G++P++ST+ +T L + + + GV P TY +L+++
Sbjct: 274 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 333
Query: 231 YKAGRDVEGDRYL--------------------NHVFKDRLVSNVN-------------- 256
KAG +E ++L + K + V N
Sbjct: 334 CKAGL-IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 392
Query: 257 --SYNMVIDCFCKVNMMDRATEICREM---------------RDRD-IAPNLVTFNTLIS 298
+Y ++D CK + +A E+ ++ DR +APN+VT+ L+
Sbjct: 393 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 452
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G CK +V ELL +L G +P+ ++++ID C+A + + A + +M + G P
Sbjct: 453 GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLP 512
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ TY LI + G + ++++ +M D +P++ T+ A+I CR+ + EKA K
Sbjct: 513 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLL 572
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M G P+ +Y+ALI L K+G+ D + F M + GC+P+ T +++ L
Sbjct: 573 SLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAA 632
Query: 479 GRFEEAHDIVKTSKE 493
G ++A ++ K+
Sbjct: 633 GLLDKARLLLGEMKQ 647
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 209/478 (43%), Gaps = 24/478 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD-- 62
G +P+ L+N+++ + AY +M+ C P YNI I IC +
Sbjct: 172 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSP 231
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGF----CNAKRVAEVFRVLEIMKERNVCPNEATV 118
+ L L +++ G A N + + F C + + F++++ M + P+ +T
Sbjct: 232 DLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTY 291
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMG 177
++ + KAF LL + M+ +T + T+L + +A + +M
Sbjct: 292 SKVITFLCHATKVEKAF-LLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 350
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-- 235
G P T+ + + + + I + G +P TY L++ L KAG
Sbjct: 351 SVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNIS 410
Query: 236 --------------DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+ D Y + L NV +Y ++D CK + +D A E+ M
Sbjct: 411 KAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM 470
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
PN + ++ LI G CK ++ +E+ + + +CG+ P T+ S+ID + + R
Sbjct: 471 LSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRL 530
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+ A+ LS+M++ PN +TY +I LC IG+ ++L+L M+ SP++ T+ AL
Sbjct: 531 DLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 590
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
I + KI+ + F M G P+ +Y LI L +G D+A+ M+Q
Sbjct: 591 IDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 648
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 190/448 (42%), Gaps = 27/448 (6%)
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
++ GY P+ TY L+ +A +V FRV + M E C + TV H + C +
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHAL--CKE 88
Query: 131 PHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
A L +ERE ++C ++ L S EA + L +M +P T+
Sbjct: 89 GRWADAL--DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYR 146
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
++ + L I++ + G P S + L+ + + LN +
Sbjct: 147 TLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTC 206
Query: 250 RLVSNVNSYNMVIDCFC------KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
YN+ I C +++D A +I EM + N V C
Sbjct: 207 GCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGV 266
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ K +L+ ++ GF PD T++ +I LC A + E A EM GV P+ TY
Sbjct: 267 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 326
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
ILI S C G + ++ LF++M++ SP + T+ ALI ++ + ++ +A F M+
Sbjct: 327 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 386
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM----------------EQNGCNPDSYT 467
G RP++ +Y AL+ L K+G +A + + + +++ P+ T
Sbjct: 387 AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT 446
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERG 495
+++ L + + + AH+++ G
Sbjct: 447 YGALVDGLCKAHKVDHAHELLDAMLSSG 474
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 219/454 (48%), Gaps = 8/454 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P++ +NA+++ K + M+ +P+ +YN L+ G+C++ EA
Sbjct: 5 GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEA 64
Query: 65 LRLVKQM--EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
LV+ M G P++ TY+ L+ G+C A +V E +L+ + R + P+ +V
Sbjct: 65 EELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVV 124
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ + +A ELL + + NTL+ A ++L+KM G
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVK 184
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+ T++ + L L E +L+ G P Y + L K+G+ ++ +
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQV 244
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD-IAPNLVTFNTLISGHC 301
L + NV +YN ++D CK +D A E+ +M D N+V ++T++ G C
Sbjct: 245 LEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLC 304
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + R ++ + G +PD T++S+++ LC+A + E+A++ + EM G PN +
Sbjct: 305 KLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAV 364
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRIS-----PDIYTFNALIQSFCRMNKIEKAEK 416
TY L+ LC+ G +A + R+ ++M + P + T+NALI C+ +I+ A K
Sbjct: 365 TYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALK 424
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
F M + G PD SYS +++ L +SGR +A+
Sbjct: 425 FFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAE 458
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 217/458 (47%), Gaps = 12/458 (2%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
C P+ T+N L++G + G + RL++ M PNV +Y L++G C +R E
Sbjct: 6 CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAE 65
Query: 101 RVLEIMKERN--VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
++ M R P+ T +L+ G + ++ ELL + R L+ ++
Sbjct: 66 ELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVA 125
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
L ++ EA +L +M G P TF+ ++ +L +L GVK
Sbjct: 126 SLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKA 185
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
TY LM+ L KAGR E ++ L + +V +Y+ + CK + A ++
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVL 245
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE---CGFKPDKFTFNSMIDCL 335
+MRD PN+VT+NT++ G CK ++ E++ + CG + +++++D L
Sbjct: 246 EQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGL--NVVGYSTVVDGL 303
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
C+ R ++A + M G P+ +TY+ L+ LC G + ++ ++M + P+
Sbjct: 304 CKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNA 363
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR-----PDNFSYSALIKALIKSGRFDEAK 450
T+ +L+ C ++ +AE+ M + G P +Y+ALI L K+GR D+A
Sbjct: 364 VTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDAL 423
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+ F M GC+PD + + I+E L + GR +A I+
Sbjct: 424 KFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMIL 461
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 150/279 (53%), Gaps = 2/279 (0%)
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+ G P T+ L+ K GR + +R L + + NV SYN +++ CK+
Sbjct: 3 RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWH 62
Query: 273 RATEICREM--RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
A E+ R+M R P++VT++TL+SG+CK +V ++RELL ++ G +PD +
Sbjct: 63 EAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTK 122
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
++ LC++ R +AL+ L EM+ G P IT+N LI C ++ + L QKM A
Sbjct: 123 VVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASG 182
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ D+ T+N L+ C+ ++++AE+ M G PD +YS+ + L KSG+ +A
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAH 242
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
Q M + +P+ T N IL+ L + G+ + A ++++
Sbjct: 243 QVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMME 281
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 89/179 (49%), Gaps = 2/179 (1%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G P+ TFN++++ + R D L M + PN ++YN L+ LC + +
Sbjct: 5 GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEA 64
Query: 380 LRLFQKM--QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
L + M + R +PD+ T++ L+ +C+ K+E++ + +++ GLRPD Y+ ++
Sbjct: 65 EELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVV 124
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+L KS R EA + M + GC P T N ++ ++ E A +++ G+
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGV 183
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 211/481 (43%), Gaps = 40/481 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G PS ++YN V+DAL+ N + + M + +P+ FTYN+L+ +C+ G VD
Sbjct: 138 FGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDG 197
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +L+ +M G P+ +YT +I C
Sbjct: 198 ACKLLVEMSNKGCDPDDVSYTTVISSMC-------------------------------- 225
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ D KA EL ++F EP+ V N L++ + EA ++ +M DRG P
Sbjct: 226 ---KLGDVDKARELAMKF---EPVVP--VYNALIHGVCKECRFKEAFDLMNEMVDRGVDP 277
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ ++CL ++ + + RG +P T+ L++ + GR +
Sbjct: 278 NVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLW 337
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + ++ + NV +YN +I C MD A + +M I PN+ T++T+I G K
Sbjct: 338 NLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKS 397
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ E ++ CG +P+ + M+D LC+ F+ A D + M+ G PP IT+
Sbjct: 398 GDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITF 457
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N I+ LC G V ++ + +M+ P+I T+N L+ R N +A +
Sbjct: 458 NNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEE 517
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+ D +Y+ ++ +G + Q M NG D+ T N + + G+ +
Sbjct: 518 RKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKT 577
Query: 484 A 484
A
Sbjct: 578 A 578
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/486 (21%), Positives = 202/486 (41%), Gaps = 40/486 (8%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y +ID L ++N +D QQM ++ + + +I R + ++ L++ ++
Sbjct: 77 YETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIR 136
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G P+V Y +++D + + + MK + PN T
Sbjct: 137 EFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTY-------------- 182
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
N LL L N A +L +M ++G P+ ++ +
Sbjct: 183 ---------------------NVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVI 221
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+ + D+++ + F +P Y L+ + K R E +N + +
Sbjct: 222 SSMCKLGDVDKARELAMKF-----EPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVD 276
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
NV SY+ VI C + ++ + + M R PN+ TF +LI G V L
Sbjct: 277 PNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGL 336
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+++ G P+ +N++I LC ++A+ ++M + + PN TY+ +I
Sbjct: 337 WNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAK 396
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
GD+ + + KM P++ + ++ C+M+ ++A +M++ G P +
Sbjct: 397 SGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVIT 456
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
++ IK L ++GR + A ME+ C P+ T N +L+ L + F EA +++ +
Sbjct: 457 FNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELE 516
Query: 493 ERGISF 498
ER + F
Sbjct: 517 ERKVEF 522
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 166/367 (45%), Gaps = 1/367 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y+ VI L +++L+ F +M V C+P+ T+ LI G G V +A
Sbjct: 274 GVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDA 333
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L M G +PNV Y LI G C+ + E V M++ ++ PN T ++++G
Sbjct: 334 VGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYG 393
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D A E + + +V ++ L SM +A ++ M G P
Sbjct: 394 FAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPT 453
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + L + +LD K P TY L++ L++A E +
Sbjct: 454 VITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIR 513
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++ + +YN ++ F M + ++ +M I + +T NT ++ +CK
Sbjct: 514 ELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLG 573
Query: 305 EVHKTRELLVML-LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V ++L + E F+ D T ++ +C E+A+ L EM++ G+ PN T+
Sbjct: 574 KVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATW 633
Query: 364 NILIRSL 370
N+L+R
Sbjct: 634 NVLVRGF 640
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 93/211 (44%), Gaps = 40/211 (18%)
Query: 321 FKPDKFTFNSMID-----------------------------------CLCRAHRFEDAL 345
FK T+ +MID C R++ E L
Sbjct: 70 FKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGL 129
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+ E+G P+ YN+++ +L + L+ M+++ + P+++T+N L+++
Sbjct: 130 KMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKAL 189
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
C+ K++ A K M G PD+ SY+ +I ++ K G D+A++ + E P
Sbjct: 190 CQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFE-----PVV 244
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
N ++ + ++ RF+EA D++ +RG+
Sbjct: 245 PVYNALIHGVCKECRFKEAFDLMNEMVDRGV 275
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 35 QMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLG-YAPNVYTYTILIDGFCNA 93
+M V+ K D T N ++ C++G V A++++ + + ++ T+TI++ G CN
Sbjct: 549 KMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNW 608
Query: 94 KRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
E L M +R + PN AT LV G F
Sbjct: 609 LGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFF 641
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 217/482 (45%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ YN VI + ++ A F +M+ P+ TYN +I G + G ++ RL
Sbjct: 61 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
QM G PN TY +L+ G C A R+ E +L+ M + + P+ T L G+ R
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 180
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D L ++++ C+ LL L + S A +L+ + + G +P
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 240
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + +L R +KP TY L+ L KA R L +
Sbjct: 241 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 300
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ + V ++N +ID + + +++ + EM++ + PN+V++ ++++ CK+ ++
Sbjct: 301 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 360
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ +L + P+ +N++ID + A + +M G+ P+ +TYN+LI
Sbjct: 361 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 420
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+ LC ++ + + + R+ PD ++N LI + C I+KA M G++
Sbjct: 421 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 480
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+Y LI L +GR +E + + M QN P + N+++E + G +A D+
Sbjct: 481 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDL 540
Query: 488 VK 489
K
Sbjct: 541 RK 542
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 212/465 (45%), Gaps = 1/465 (0%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAP-NVYTYTILIDGFC 91
F ++ +PD F +N + G + EA+ ++++M G P N ++Y ++I G
Sbjct: 15 FGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMW 74
Query: 92 NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL 151
A R + V + M ER V PN T +++ G + D F L + + +
Sbjct: 75 RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAI 134
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
N LL L E +A+L +M + +P+ T+ L D + +
Sbjct: 135 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKY 194
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+K GV T +L+ L K G+ + L + LV YN +I+ +C+ +
Sbjct: 195 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 254
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
+ A +M+ R I P+ +T+N LI+G CK + ++LL+ + + G P TFN++
Sbjct: 255 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 314
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
ID R + E LSEM E G+ PN ++Y ++ + C G + ++ + M +
Sbjct: 315 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 374
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
P+ +NA+I ++ ++A M + G+ P +Y+ LIK L + EA++
Sbjct: 375 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 434
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
S+ + PD+ + N ++ +G ++A D+ + + GI
Sbjct: 435 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 479
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 185/418 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN ++ L ++ + +M+ + PD FTY+IL G+ R G
Sbjct: 128 GLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAM 187
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L + G YT +IL++G C +V+ VL+ + + P +L++G
Sbjct: 188 LSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLING 247
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + AF + R + N L+ L + A +L +M D G P
Sbjct: 248 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 307
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + L + +L + G+KP +Y ++ A K G+ E L+
Sbjct: 308 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 367
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+F ++ N YN +ID + + D+A + +M+ I+P++VT+N LI G C +
Sbjct: 368 DMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQS 427
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + E++ L PD ++N++I C + ALD M ++G+ TY+
Sbjct: 428 QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYH 487
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
LI L G + L+QKM + + P N +++++ + KAE ML
Sbjct: 488 QLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEML 545
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 180/405 (44%), Gaps = 3/405 (0%)
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE--PLTQKLV 152
R A+V R I+ P+ V D +A +L R M R+ P
Sbjct: 7 RHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGML-RRMGRDGAPPPNAFS 65
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
N ++ + +A + +M +R LP T++ + + G DL + D +
Sbjct: 66 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 125
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
G+KP TY +L+ L +AGR E L+ + ++V + +Y+++ D +
Sbjct: 126 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 185
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
+ + + T + L++G CKD +V E+L L+ G P + +N++I
Sbjct: 186 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 245
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
+ C+ E A +M + P+ ITYN LI LC + + L +MQ + ++
Sbjct: 246 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 305
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
P + TFN LI ++ R ++EK M GL+P+ SY +++ A K+G+ EA
Sbjct: 306 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 365
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M P++ N I++ V+ G ++A +V+ K GIS
Sbjct: 366 LDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGIS 410
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 143/338 (42%)
Query: 16 VIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLG 75
+++ L K + +A Q + P R YN LI+G C+ G ++ A QM+
Sbjct: 209 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 268
Query: 76 YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAF 135
P+ TY LI+G C A+R+ +L M++ V P T +L+ R K F
Sbjct: 269 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 328
Query: 136 ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCL 195
+L E + +++ N EA AIL M + LP + ++ +
Sbjct: 329 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 388
Query: 196 VTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNV 255
V ++ +++ G+ P TY LL++ L + E + +N + RL+ +
Sbjct: 389 VEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 448
Query: 256 NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
SYN +I C +D+A ++ + M I + T++ LISG +++ L
Sbjct: 449 VSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQK 508
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
+++ P N M++ + A D EM++
Sbjct: 509 MMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 546
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 224/467 (47%), Gaps = 9/467 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S ++P YN ++ A+ K + M + P+R TYN L++G C++G
Sbjct: 231 VSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGS 290
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ EA ++V+ M+ P++ TY ILI+G CNA + E ++++MK + P+ T +
Sbjct: 291 LKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNT 350
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD-R 179
L+ G F +A +L+ + ++ N L L E ++++ +
Sbjct: 351 LIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMH 410
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G+ P+ T+ + + DL+ ++ ++G+K T +++AL K + E
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEA 470
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L+ K + + +Y +I + + +++A E+ EM+ I P + TFN+LI G
Sbjct: 471 HNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGG 530
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
C + E L E G PD TFNS+I C+ R E A + +E ++ P+
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
T NIL+ LC G ++L F + +R D T+N +I +FC+ K+++A
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTLITER-EVDTVTYNTMISAFCKDKKLKEAYDLLS 649
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ-------TFLSMEQN 459
M L PD F+Y+++I +L++ G+ EA + F SM++N
Sbjct: 650 EMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGKFGSMKRN 696
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 235/492 (47%), Gaps = 5/492 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV--- 60
L PS L++ + A + + +A FQ+M + KP+ T N L+ G+ R
Sbjct: 125 LSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFS 184
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM-KERNVCPNEATVR 119
+ A + M +G + +V T+ +L++G+C ++ + +LE M E NV P+ T
Sbjct: 185 IASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYN 244
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+++ + + +LL+ + ++ N L+Y EA I+ M
Sbjct: 245 TILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
LP+ T++ + + + E ++D ++P TY L++ ++ G +E
Sbjct: 305 NILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD-RDIAPNLVTFNTLIS 298
+ + + D + N ++N+ + CK + T +E+ + +P++VT++TLI
Sbjct: 365 KKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIK 424
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
+ K ++ E++ + + G K + T N+++D LC+ + ++A + L + G
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIV 484
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ +TY LI V ++ ++ +M+ +I+P + TFN+LI C K E A + F
Sbjct: 485 DEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKF 544
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+ GL PD+ +++++I K GR ++A + + ++ PD+YT N++L L ++
Sbjct: 545 DELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604
Query: 479 GRFEEAHDIVKT 490
G E+A + T
Sbjct: 605 GMTEKALNFFNT 616
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 185/425 (43%), Gaps = 42/425 (9%)
Query: 113 PNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL----SNNSMASE 168
P++A + PH A ++ + + + L CNTLL L S+ S+AS
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIAS- 187
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR-GVKPRFSTYLLLM 227
A + M G + TF+ V L + G+L+ + V P TY ++
Sbjct: 188 AREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTIL 247
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
+A+ K GR + L + ++ LV N +YN ++ +CK+ + A +I M+ +I
Sbjct: 248 KAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNIL 307
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID-------------- 333
P+L T+N LI+G C + + EL+ ++ +PD T+N++ID
Sbjct: 308 PDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKL 367
Query: 334 ---------------------CLCRAHRFEDALDCLSEMVEW-GVPPNTITYNILIRSLC 371
LC+ + E+ + E+VE G P+ +TY+ LI++
Sbjct: 368 MEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYL 427
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
+GD++ +L + ++M I + T N ++ + C+ K+++A S G D
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEV 487
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
+Y LI + + ++A + + M++ P T N ++ L G+ E A +
Sbjct: 488 TYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDEL 547
Query: 492 KERGI 496
E G+
Sbjct: 548 AESGL 552
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 157/327 (48%), Gaps = 11/327 (3%)
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST--YLLLMEALYKAGRDVEGD 240
P + FD ++ + + + I+ +KP T LL+ Y + +
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188
Query: 241 RYLNHVFKDRL---VS-NVNSYNMVIDCFCKVNMMDRATEICREM-RDRDIAPNLVTFNT 295
R VF D + VS +V ++N++++ +C ++ A + M + ++ P+ VT+NT
Sbjct: 189 R---EVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNT 245
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
++ K + ++LL+ + G P++ T+N+++ C+ ++A + M +
Sbjct: 246 ILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ P+ TYNILI +C G + L L M++ ++ PD+ T+N LI + +A+
Sbjct: 306 ILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAK 365
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM-EQNGCNPDSYTSNLILET 474
K M G++P+ +++ +K L K + +E + + E +G +PD T + +++
Sbjct: 366 KLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKA 425
Query: 475 LVQQGRFEEAHDIVKTSKERGISFKSF 501
++ G A ++++ ++GI +
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTI 452
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/489 (25%), Positives = 222/489 (45%), Gaps = 2/489 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ-CKPDRFTYNILIHGICRIG 59
+S G SPS + + +++AL +D+A F +M + PD TY +I +CR G
Sbjct: 166 LSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAG 225
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+D A ++ ++ G P V TY +L+D C + RV E FR+ M E V P+ T
Sbjct: 226 EIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFG 285
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
L+ G+ R + +L +++ N ++ SEA + +M +
Sbjct: 286 ILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSK 345
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY-LLLMEALYKAGRDVE 238
G T++ L ++ ILD + G+ S + ++ L GR
Sbjct: 346 GIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDL 405
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
R + + L N I CK + A EI ++ + + N+ T N LI
Sbjct: 406 VLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIH 465
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G C+ + + ++L ++ G + D+ T+N MI C+A + ++A+ +M++ G P
Sbjct: 466 GLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKP 525
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ T+NI + + C +G V L L +M+++ + PDI T+ +I +C+ + KA +
Sbjct: 526 DLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYL 585
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
++ GLRP+ Y+ALI ++G +A +M+ NG P T N ++ +
Sbjct: 586 TELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHA 645
Query: 479 GRFEEAHDI 487
G EE +
Sbjct: 646 GLVEEVKAV 654
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 127/494 (25%), Positives = 227/494 (45%), Gaps = 5/494 (1%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P Y A+I AL ++ ID A+ ++ +P TYN+L+ +C+ G V+EA
Sbjct: 207 VAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAF 266
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
RL +M P++ T+ ILI G ++ EV VL+ M+ + PNE ++
Sbjct: 267 RLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIG-- 324
Query: 126 FRCLDPHKAFEL-LIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLP 183
+ C H + L L M + + Q +V L+ + L A IL +M G +
Sbjct: 325 WHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMV 384
Query: 184 ESSTFDYTVTCLVTGLD-LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
S F+ V + G L+ ++ + R +KP + ++ L K+G+ E
Sbjct: 385 HCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEI 444
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
V L NV + N +I C+ N M AT++ + M + + + +T+N +I G CK
Sbjct: 445 WFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCK 504
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+++ + +L +++ GFKPD FTFN + C + E+ L L +M G+ P+ +T
Sbjct: 505 ASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVT 564
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y +I C D+ ++ ++ + + P+ +NALI + R I A +M
Sbjct: 565 YGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMK 624
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G++P +Y++L+ + +G +E K F +I++ + G+ +
Sbjct: 625 YNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKID 684
Query: 483 EAHDIVKTSKERGI 496
EA K RGI
Sbjct: 685 EAVMYFKEMHSRGI 698
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/539 (23%), Positives = 238/539 (44%), Gaps = 43/539 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ YN ++DAL KS ++ A+ +M + +P T+ ILI G+ R E
Sbjct: 241 GIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEV 300
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++++M+G G PN Y +I C +E ++ + M + + T +
Sbjct: 301 GAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKA 360
Query: 125 VFRCLDPHKA--------------------------------FELLIRFMEREPLTQKLV 152
+ + + A +L++R + RE L + L
Sbjct: 361 LCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLI-REMLARFLK 419
Query: 153 CNTLLY-----RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGI 207
N L L + EAA I ++ +G +T + + L G ++ E +
Sbjct: 420 PNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKV 479
Query: 208 LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
L + GV+ TY ++++ KA + E + + + K ++ ++N+ + +C
Sbjct: 480 LKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCN 539
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+ ++ + +M+ + P++VT+ T+I G+CK ++HK E L L++ G +P+
Sbjct: 540 LGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVI 599
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+N++I R DA+ L M G+ P +TYN L+ +C G V +F +
Sbjct: 600 YNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCI 659
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
I + + +IQ FC++ KI++A F M + G+ P+ +Y+ L+ A KSG +
Sbjct: 660 VKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKE 719
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE-----AHDIVKTSKERGISFKSF 501
EA + F M G PDS + N ++ + ++ A + K+ G S+ +F
Sbjct: 720 EASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAF 778
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 145/330 (43%), Gaps = 40/330 (12%)
Query: 209 DTFIK---RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS-NVNSYNMVIDC 264
D F++ RG P T +L+EAL G+ + + + V+ +V++Y +I
Sbjct: 161 DAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKA 220
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
C+ +D A + E+R I P +VT+N L+ CK V + L ++E +P
Sbjct: 221 LCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPS 280
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
TF +I L R +F + L EM +G+ PN + YN +I C G + +L+LF
Sbjct: 281 IVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFD 340
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG------------------- 425
+M + I + T+N + ++ C+ ++E AEK ML G
Sbjct: 341 EMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGT 400
Query: 426 -----------------LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
L+P++ +A I+ L KSG+ +EA + + + G + TS
Sbjct: 401 GRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATS 460
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGISF 498
N ++ L Q +EA ++K G+
Sbjct: 461 NALIHGLCQGNNMKEATKVLKAMVNSGVEL 490
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 158/381 (41%), Gaps = 37/381 (9%)
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGD-RGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
C+ L+ L A + +M D + P+ T+ + L +++ +L
Sbjct: 178 CSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAEL 237
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+ G++P TY +LM+AL K+GR E R + + R+ ++ ++ ++I +
Sbjct: 238 RRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQF 297
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
+ +EM+ I PN V +N +I HC+ + +L ++ G K T+N +
Sbjct: 298 GEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLI 357
Query: 332 IDCLCRAHRFEDALDCLSEM---------------VEWG--------------------- 355
LC+ E A L EM V W
Sbjct: 358 AKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARF 417
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ PN I+ LC G + ++ ++ + ++ T NALI C+ N +++A
Sbjct: 418 LKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEAT 477
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
K +M+ G+ D +Y+ +I+ K+ + DEA Q M + G PD +T N+ L T
Sbjct: 478 KVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTY 537
Query: 476 VQQGRFEEAHDIVKTSKERGI 496
G+ EE ++ K G+
Sbjct: 538 CNLGKVEEILHLLDQMKSEGL 558
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 100/219 (45%), Gaps = 1/219 (0%)
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG-FKPDKFTFN 329
+ RA + E+ R +P++ T + L+ ++ R++ + + PD T+
Sbjct: 156 LSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYT 215
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+MI LCRA + A L+E+ G+ P +TYN+L+ +LC G V + RL +M
Sbjct: 216 AMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEG 275
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
R+ P I TF LI R + + M G+ P+ Y+ +I + G EA
Sbjct: 276 RVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEA 335
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+ F M G T NLI + L ++G E A I+
Sbjct: 336 LKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKIL 374
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 100/215 (46%), Gaps = 14/215 (6%)
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
R + L+ FN L A+ H T +++ C P + +
Sbjct: 112 RRLVSRLLRFNPLSVAAAAIADSHCTATADLLVRACLNSPAPGSLSR------------- 158
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR-ISPDIYTFNALI 402
A D E+ G P+ T +IL+ +L G + + ++F +M+ + ++PD++T+ A+I
Sbjct: 159 AADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMI 218
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
++ CR +I+ A + G++P +Y+ L+ AL KSGR +EA + M +
Sbjct: 219 KALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVR 278
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
P T +++ L + +F E +++ + GI+
Sbjct: 279 PSIVTFGILISGLARGQQFGEVGAVLQEMQGFGIT 313
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ + GI P+ YN+++ + + ++ F Q V + Y I+I G C+IG
Sbjct: 623 MKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGK 682
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+DEA+ K+M G PN TYT L+ + + E ++ + M + P+ + +
Sbjct: 683 IDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNT 742
Query: 121 LVHG 124
L+ G
Sbjct: 743 LISG 746
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 214/454 (47%), Gaps = 47/454 (10%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
C P+ T+N L++G + G + RL++ M G PNV +Y L++G C +R E
Sbjct: 6 CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAE 65
Query: 101 RVLEIMKERN--VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
++ M R P+ T +L+ G + ++ ELL + R L+ ++
Sbjct: 66 ELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMA 125
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGV 216
L ++ EA +L +M G P TF+ ++ C L++ ++ +L T GV
Sbjct: 126 SLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADS--LLQTMAASGV 183
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
K TY LM+ L KAGR E ++ L + +V +Y+ + CK + A +
Sbjct: 184 KADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQ 243
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEV------------------------------ 306
+ +MRD D PN+VT+NT++ G CK ++
Sbjct: 244 VLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGL 303
Query: 307 ------HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ R ++ + G +PD T++S+++ LC+A + E+A++ + EM G PN
Sbjct: 304 CKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNA 363
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKM-----QADRISPDIYTFNALIQSFCRMNKIEKAE 415
+TY L+ LC+ G +A + R+ ++M D P + T+NALI C+ +I+ A
Sbjct: 364 VTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDAL 423
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
K F M + G PD SYS +++ L +SGR +A
Sbjct: 424 KFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 190/420 (45%), Gaps = 34/420 (8%)
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M+ G PN T+ L++GF R + R+LE M R + PN + L+ G+ +
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
H+A EL+ + R G R P+ T+
Sbjct: 61 WHEAEELVRDMISR--------------------------------GGRS-TPDLVTYST 87
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
++ + E+ +L I RG++P Y +M +L K+ R E L + +
Sbjct: 88 LLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAG 147
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+ ++N +I C+ ++ A + + M + ++VT+NTL+ G CK + +
Sbjct: 148 CCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAE 207
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+LL + G PD ++S + LC++ + +A L +M + PN +TYN ++ L
Sbjct: 208 QLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGL 267
Query: 371 CAIGDVARSLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
C G + +L + ++M +D ++ ++ ++ C++ + ++A +M G RPD
Sbjct: 268 CKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPD 327
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+YS+L+ L K+G+ +EA + M GC P++ T ++ L GR EA +V+
Sbjct: 328 VVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVE 387
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 183/452 (40%), Gaps = 76/452 (16%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQM--SVDQCKPDRFTYNILIHGICRIGVVD 62
GI P+ YN +++ L K A + M + PD TY+ L+ G C+ G V+
Sbjct: 40 GIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVE 99
Query: 63 EALRLVKQM--EGL---------------------------------GYAPNVYTYTILI 87
E+ L+K++ GL G P + T+ LI
Sbjct: 100 ESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLI 159
Query: 88 DGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPL 147
G C K + +L+ M V + T +L+ G+ + +A +LL R
Sbjct: 160 SGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCA 219
Query: 148 TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGI 207
+ ++ +Y L + A +L +M D + P T++ I
Sbjct: 220 PDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNT----------------I 263
Query: 208 LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
LD K G + T L +ME + + D NV Y+ V+D CK
Sbjct: 264 LDGLCKSG---KIDTALEMMEQMASS---------------DGCGLNVVGYSTVVDGLCK 305
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+ A + M P++VT+++L++G CK ++ + E + + G KP+ T
Sbjct: 306 LGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVT 365
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWG-----VPPNTITYNILIRSLCAIGDVARSLRL 382
+ S++ LC R +A + EM G PP+ TYN LI LC G + +L+
Sbjct: 366 YCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKF 425
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
FQ+M++ PD +++ +++ R + +A
Sbjct: 426 FQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 2/179 (1%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G P+ TFN++++ + R D L M G+ PN ++YN L+ LC + +
Sbjct: 5 GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEA 64
Query: 380 LRLFQKM--QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
L + M + R +PD+ T++ L+ +C+ K+E++ + +++ GLRPD Y+ ++
Sbjct: 65 EELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVM 124
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+L KS R EA + M + GC P T N ++ ++ E A +++T G+
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGV 183
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 122/510 (23%), Positives = 233/510 (45%), Gaps = 57/510 (11%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
PD Y +I G+C + +EA+ + +M PNV TY IL+ G N +++ R+
Sbjct: 40 PDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRI 99
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME------------------- 143
L +M P+ SLVH R D A++LL + ++
Sbjct: 100 LSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICS 159
Query: 144 -REP------LTQK-----LVCNTLLYRLSNNSMA---------SEAAAILRKMGDRGYL 182
EP L +K L +L +++ ++ + +A ++R+M +G++
Sbjct: 160 SEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFI 219
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P++ST+ + L + + + + G+ P Y L+++ KAG + +
Sbjct: 220 PDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNW 279
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + +D NV +Y +I + K + +A E+ M + PN+VT+ LI G CK
Sbjct: 280 FDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCK 339
Query: 303 DAEVHKTRELLVML---------LECGFK--------PDKFTFNSMIDCLCRAHRFEDAL 345
++ K ++ ++ ++ F+ P+ FT+ +++D LC+A++ ++A
Sbjct: 340 AGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEAR 399
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
D L M G PN + Y+ LI C G + + +F M P++YT+++LI
Sbjct: 400 DLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRL 459
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
+ +++ A K ML P+ Y+ +I L K G+ DEA + + ME+ GCNP+
Sbjct: 460 FKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNV 519
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERG 495
T +++ + GR E+ ++++ +G
Sbjct: 520 VTYTAMIDGFGKSGRVEKCLELLQQMSSKG 549
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 212/478 (44%), Gaps = 26/478 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRI-----G 59
G PS R++N+++ A +S AY ++M C+P YNILI GIC
Sbjct: 107 GCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKD 166
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
V+D A + +M G N + C + + + V+ M + P+ +T
Sbjct: 167 VLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYS 226
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKL-VCNTLLYRLSNNSMASEAAAILRKMGD 178
++ + KAF+L + M+R + + V TL+ +A +M
Sbjct: 227 KVIGYLCNASKVEKAFQLF-QEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMER 285
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P T+ + + +++ + + + +G P TY L++ L KAG+ +E
Sbjct: 286 DGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGK-IE 344
Query: 239 GDRYLNHVFKDRLVS------------------NVNSYNMVIDCFCKVNMMDRATEICRE 280
+ + K V NV +Y ++D CK + A ++ +
Sbjct: 345 KASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKS 404
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M PN V ++ LI G CK ++ + +E+ +LECG+ P+ +T++S+ID L + R
Sbjct: 405 MSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKR 464
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
+ AL LS+M+E PN + Y +I LC +G + +L M+ +P++ T+ A
Sbjct: 465 LDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTA 524
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+I F + ++EK + M + G P+ +Y LI +G DEA + M+Q
Sbjct: 525 MIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQ 582
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 217/490 (44%), Gaps = 36/490 (7%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
M + C P +N L+H CR G A +L+K+M G P Y ILI G C+
Sbjct: 100 LSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICS 159
Query: 93 AKRVAEVFRVLEI-------MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
++ + VL++ M E V N+ + + RCL FE + RE
Sbjct: 160 SEEPGK--DVLDLAEKAYGEMLEAGVVLNKVNISNFS----RCLCGIGKFEKAYNVI-RE 212
Query: 146 PLTQKLVCNTLLYR-----LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLD 200
+++ + +T Y L N S +A + ++M G P+ + +
Sbjct: 213 MMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGF 272
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
+ + D + G P TY L+ A K+ + + + + N+ +Y
Sbjct: 273 IEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTA 332
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIA-----------------PNLVTFNTLISGHCKD 303
+ID CK +++A++I + M+ ++ PN+ T+ L+ G CK
Sbjct: 333 LIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKA 392
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V + R+LL + G +P+ ++++ID C+A + ++A + + M+E G PN TY
Sbjct: 393 YQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTY 452
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+ LI L + +L++ KM + +P++ + +I C++ K ++A K M
Sbjct: 453 SSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEE 512
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G P+ +Y+A+I KSGR ++ + M GC P+ T +++ G +E
Sbjct: 513 KGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDE 572
Query: 484 AHDIVKTSKE 493
AH +++ K+
Sbjct: 573 AHKLLEEMKQ 582
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 214/481 (44%), Gaps = 36/481 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T Y+ VI L ++ ++ A+ FQ+M + PD + Y LI C+ G +++A
Sbjct: 217 GFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQA 276
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ME G APNV TYT LI + +++V++ V E+M + PN T +L+ G
Sbjct: 277 RNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDG 336
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + KA ++ + M++E N + R + P
Sbjct: 337 LCKAGKIEKASQIY-KIMKKE-----------------NVEIPDVDMHFRVVDGASNEPN 378
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ V L + E +L + G +P Y L++ KAG+ E
Sbjct: 379 VFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFT 438
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + NV +Y+ +ID K +D A ++ +M + APN+V + +I G CK
Sbjct: 439 TMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVG 498
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + +L+VM+ E G P+ T+ +MID ++ R E L+ L +M G PN +TY
Sbjct: 499 KTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYR 558
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI C+ G + + +L ++M+ + + +I+ F R F + L L
Sbjct: 559 VLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNR---------EFIASLYL 609
Query: 425 GLR-------PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
P Y LI IK+GR + A + L+ E + +P S + I TL++
Sbjct: 610 SFEISENDSVPVAPVYRVLIDNFIKAGRLEIALE--LNEELSSFSPFSAANQNIHITLIE 667
Query: 478 Q 478
Sbjct: 668 N 668
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/520 (25%), Positives = 221/520 (42%), Gaps = 66/520 (12%)
Query: 36 MSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR 95
MS + D FT H +C+ G EAL L+++ E + P+ YT +I G C A
Sbjct: 1 MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEKEE---FVPDTVLYTKMISGLCEASL 57
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK---AFELLIRFMEREPLTQKLV 152
E L M+ + PN T R L+ G CL+ K +L + +
Sbjct: 58 FEEAMDFLTRMRASSCLPNVLTYRILLCG---CLNKEKLGRCKRILSMMITEGCYPSPRI 114
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTG-------LDLNET- 204
N+L++ + + A +L+KM G P ++ + + + LDL E
Sbjct: 115 FNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKA 174
Query: 205 -----------------------CGI---------LDTFIKRGVKPRFSTYLLLMEALYK 232
CGI + + +G P STY ++ L
Sbjct: 175 YGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCN 234
Query: 233 AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
A + + + + ++ + +V Y +ID FCK +++A EM APN+VT
Sbjct: 235 ASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVT 294
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+ LI + K +V K E+ M+L G P+ T+ ++ID LC+A + E A M
Sbjct: 295 YTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMK 354
Query: 353 EWGV-----------------PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
+ V PN TY L+ LC V + L + M + P+
Sbjct: 355 KENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNH 414
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
++ALI C+ K+++A++ F +ML G P+ ++YS+LI L K R D A +
Sbjct: 415 VVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSK 474
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
M +N C P+ +++ L + G+ +EA+ ++ +E+G
Sbjct: 475 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKG 514
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 157/344 (45%), Gaps = 8/344 (2%)
Query: 158 YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK 217
+ L + EA ++L K ++P++ + ++ L E L
Sbjct: 18 HSLCKSGKWREALSLLEK---EEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCL 74
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
P TY +L+ + R L+ + + + +N ++ +C+ A ++
Sbjct: 75 PNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKL 134
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHK-----TRELLVMLLECGFKPDKFTFNSMI 332
++M P V +N LI G C E K + +LE G +K ++
Sbjct: 135 LKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFS 194
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
CLC +FE A + + EM+ G P+T TY+ +I LC V ++ +LFQ+M+ + I+
Sbjct: 195 RCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIA 254
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PD+Y + LI SFC+ IE+A F M G P+ +Y+ALI A +KS + +A +
Sbjct: 255 PDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEV 314
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ M GC P+ T +++ L + G+ E+A I K K+ +
Sbjct: 315 YEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENV 358
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 151/384 (39%), Gaps = 80/384 (20%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y A++D L K+ + A + MSV+ C+P+ Y+ LI G C+ G +DEA +
Sbjct: 377 PNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEV 436
Query: 68 VKQMEGLGYAPNVYTY-----------------------------------TILIDGFCN 92
M GY PNVYTY T +IDG C
Sbjct: 437 FTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCK 496
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
+ E ++++ +M+E+ PN T +++ G + K EL
Sbjct: 497 VGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLEL--------------- 541
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT-CLVTGLDLNETCGILDTF 211
L++M +G P T+ + C TGL L+E +L+
Sbjct: 542 --------------------LQQMSSKGCAPNFVTYRVLINHCCSTGL-LDEAHKLLEE- 579
Query: 212 IKRGVKPR-FSTYLLLMEALYKAGRDVEGDRYLN-HVFKDRLVSNVNSYNMVIDCFCKVN 269
+K+ PR + Y ++E R+ YL+ + ++ V Y ++ID F K
Sbjct: 580 MKQTYWPRHVAGYRKVIEGF---NREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAG 636
Query: 270 MMDRATEICREMRDRD--IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
++ A E+ E+ A N TLI + K EL ++ G P+
Sbjct: 637 RLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSI 696
Query: 328 FNSMIDCLCRAHRFEDALDCLSEM 351
+I L R +R+E+AL L +
Sbjct: 697 LVHLIKGLLRVNRWEEALQLLDSI 720
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 92/230 (40%), Gaps = 40/230 (17%)
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL- 366
K RE L +L + F PD + MI LC A FE+A+D L+ M PN +TY IL
Sbjct: 25 KWREALSLLEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILL 84
Query: 367 ----------------------------------IRSLCAIGDVARSLRLFQKMQADRIS 392
+ + C GD A + +L +KM
Sbjct: 85 CGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQ 144
Query: 393 PDIYTFNALIQSFCRMNKIEK-----AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
P +N LI C + K AEKA+ ML G+ + + S + L G+F+
Sbjct: 145 PGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFE 204
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+A M G PD+ T + ++ L + E+A + + K GI+
Sbjct: 205 KAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIA 254
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 4/209 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P+ Y A+ID KS ++ QQMS C P+ TY +LI+ C G++DEA
Sbjct: 514 GCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEA 573
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L+++M+ + +V Y +I+GF N + +A ++ EI E + P R L+
Sbjct: 574 HKLLEEMKQTYWPRHVAGYRKVIEGF-NREFIASLYLSFEI-SENDSVPVAPVYRVLIDN 631
Query: 125 VFRCLDPHKAFELLIRFMEREPLT--QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ A EL P + + + TL+ LS A +A + M RG +
Sbjct: 632 FIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSI 691
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTF 211
PE S + + L+ E +LD+
Sbjct: 692 PELSILVHLIKGLLRVNRWEEALQLLDSI 720
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 213/467 (45%), Gaps = 36/467 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P + +N ++ L+KSN + A+ F + + K D +++ I+I G C +G +D+
Sbjct: 125 GLVPGSNTFNNLLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKG 183
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ QME +G +PNV YT LIDG C + ++ M E +V N+ T L++G
Sbjct: 184 FEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLING 243
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ + + + KM G +P
Sbjct: 244 FFKM-----------------------------------GLKKDGIELYEKMKLTGIVPN 268
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + LN + D +RGV TY L+ L + R +E +R +
Sbjct: 269 VYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMC 328
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +D L N+ SYN +ID +C + +D+A+ + +M+ +P+L T+N LI+G +
Sbjct: 329 RMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAK 388
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+++ + G P K T+ ++D L R+ E A S M + G+ + Y
Sbjct: 389 NSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYG 448
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI LC +GD+ + +LF+ + + P+ +N +I +C+ +A + M
Sbjct: 449 VLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGEN 508
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
G+ P+ SY++ I+ L K ++ EA+ M + G P N+I
Sbjct: 509 GMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 555
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 196/371 (52%), Gaps = 10/371 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP+ +Y +ID K+ I+ F +M +++TY +LI+G ++G+ +
Sbjct: 193 MGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKD 252
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ L ++M+ G PNVYTY +I CN ++ F + + M+ER V N T +L+
Sbjct: 253 GIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIG 312
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + +A L+ R M+R+ L+ L+ NTL+ + +A+++ +M G
Sbjct: 313 GLCQERRVLEAERLMCR-MKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQS 371
Query: 183 PESSTFDYTVTCLVTGL-DLNETCGILDTFIK---RGVKPRFSTYLLLMEALYKAGRDVE 238
P +T++ L+ G + + G+ D + RG+ P TY +LM+AL ++ +
Sbjct: 372 PSLATYN----ILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEK 427
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + K LV+++ Y ++I C V M A+++ + + + + PN V +NT+I
Sbjct: 428 AFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIY 487
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G+CK+ ++ LL + E G P+ ++NS I LC+ ++ +A L +M+E G+ P
Sbjct: 488 GYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKP 547
Query: 359 NTITYNILIRS 369
+ +N++ ++
Sbjct: 548 SISIWNMISKA 558
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 194/462 (41%), Gaps = 41/462 (8%)
Query: 40 QCKPDRFTYNILIH-----GICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAK 94
Q D F ++LIH R + ++AL QM G G P T+ L+ +
Sbjct: 85 QPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSN 144
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCN 154
+ +RV K NV + + ++ G K FE+L + E +V
Sbjct: 145 FFEKAWRVFNETK-GNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYT 203
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
TL+ N + KMG+ + YT T L+ G F K
Sbjct: 204 TLIDGCCKNGDIERGKQLFYKMGELDVVAN----QYTYTVLING------------FFKM 247
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G+K K G ++ L + V NV +YN +I C ++ A
Sbjct: 248 GLK--------------KDGIELYEKMKLTGI-----VPNVYTYNSMICRCCNDGKLNNA 288
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
E+ EMR+R +A N+VT+NTLI G C++ V + L+ + G P+ ++N++ID
Sbjct: 289 FELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDG 348
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
C + A ++M G P+ TYNILI + A + ++M+A +SP
Sbjct: 349 YCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPS 408
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
T+ L+ + R + IEKA + + SM GL D + Y LI L G EA + F
Sbjct: 409 KVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFK 468
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
S+++ P+ N ++ ++G A ++K E G+
Sbjct: 469 SLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGM 510
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 145/290 (50%), Gaps = 1/290 (0%)
Query: 208 LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
+ I RG+ P +T+ L+ L K+ + R N K + +V S+ ++I C+
Sbjct: 118 FNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNET-KGNVKLDVYSFGIMIKGCCE 176
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
V +D+ E+ +M + ++PN+V + TLI G CK+ ++ + ++L + E +++T
Sbjct: 177 VGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYT 236
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+ +I+ + +D ++ +M G+ PN TYN +I C G + + LF +M+
Sbjct: 237 YTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMR 296
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
++ ++ T+N LI C+ ++ +AE+ M GL P+ SY+ LI G D
Sbjct: 297 ERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLD 356
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+A F M+ +G +P T N+++ + D+V+ + RG+S
Sbjct: 357 KASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLS 406
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 217/482 (45%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ YN VI + ++ A F +M+ P+ TYN +I G + G ++ RL
Sbjct: 198 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 257
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
QM G PN TY +L+ G C A R+ E +L+ M + + P+ T L G+ R
Sbjct: 258 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 317
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D L ++++ C+ LL L + S A +L+ + + G +P
Sbjct: 318 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 377
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + +L R +KP TY L+ L KA R L +
Sbjct: 378 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 437
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ + V ++N +ID + + +++ + EM++ + PN+V++ ++++ CK+ ++
Sbjct: 438 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 497
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ +L + P+ +N++ID + A + +M G+ P+ +TYN+LI
Sbjct: 498 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 557
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+ LC ++ + + + R+ PD ++N LI + C I+KA M G++
Sbjct: 558 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 617
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+Y LI L +GR +E + + M QN P + N+++E + G +A D+
Sbjct: 618 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDL 677
Query: 488 VK 489
K
Sbjct: 678 RK 679
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 212/465 (45%), Gaps = 1/465 (0%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAP-NVYTYTILIDGFC 91
F ++ +PD F +N + G + EA+ ++++M G P N ++Y ++I G
Sbjct: 152 FGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMW 211
Query: 92 NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL 151
A R + V + M ER V PN T +++ G + D F L + + +
Sbjct: 212 RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAI 271
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
N LL L E +A+L +M + +P+ T+ L D + +
Sbjct: 272 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKY 331
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+K GV T +L+ L K G+ + L + LV YN +I+ +C+ +
Sbjct: 332 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 391
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
+ A +M+ R I P+ +T+N LI+G CK + ++LL+ + + G P TFN++
Sbjct: 392 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 451
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
ID R + E LSEM E G+ PN ++Y ++ + C G + ++ + M +
Sbjct: 452 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 511
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
P+ +NA+I ++ ++A M + G+ P +Y+ LIK L + EA++
Sbjct: 512 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 571
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
S+ + PD+ + N ++ +G ++A D+ + + GI
Sbjct: 572 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 616
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 185/418 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN ++ L ++ + +M+ + PD FTY+IL G+ R G
Sbjct: 265 GLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAM 324
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L + G YT +IL++G C +V+ VL+ + + P +L++G
Sbjct: 325 LSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLING 384
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + AF + R + N L+ L + A +L +M D G P
Sbjct: 385 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 444
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + L + +L + G+KP +Y ++ A K G+ E L+
Sbjct: 445 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 504
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+F ++ N YN +ID + + D+A + +M+ I+P++VT+N LI G C +
Sbjct: 505 DMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQS 564
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + E++ L PD ++N++I C + ALD M ++G+ TY+
Sbjct: 565 QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYH 624
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
LI L G + L+QKM + + P N +++++ + KAE ML
Sbjct: 625 QLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEML 682
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 200/445 (44%), Gaps = 5/445 (1%)
Query: 57 RIGVVDEALRLVKQM--EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPN 114
R+ + D ALRL+ + E P++ + +L++ + R A+V R I+ P+
Sbjct: 104 RLRLPDGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPD 163
Query: 115 EATVRSLVHGVFRCLDPHKAFELLIRFMERE--PLTQKLVCNTLLYRLSNNSMASEAAAI 172
V D +A +L R M R+ P N ++ + +A +
Sbjct: 164 TFAWNKAVQACVAAGDLGEAVGML-RRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEV 222
Query: 173 LRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK 232
+M +R LP T++ + + G DL + D + G+KP TY +L+ L +
Sbjct: 223 FDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCR 282
Query: 233 AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
AGR E L+ + ++V + +Y+++ D + + + + T
Sbjct: 283 AGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYT 342
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+ L++G CKD +V E+L L+ G P + +N++I+ C+ E A +M
Sbjct: 343 CSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK 402
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
+ P+ ITYN LI LC + + L +MQ + ++P + TFN LI ++ R ++E
Sbjct: 403 SRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLE 462
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
K M GL+P+ SY +++ A K+G+ EA M P++ N I+
Sbjct: 463 KCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII 522
Query: 473 ETLVQQGRFEEAHDIVKTSKERGIS 497
+ V+ G ++A +V+ K GIS
Sbjct: 523 DAYVEHGPNDQAFILVEKMKSNGIS 547
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 143/338 (42%)
Query: 16 VIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLG 75
+++ L K + +A Q + P R YN LI+G C+ G ++ A QM+
Sbjct: 346 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 405
Query: 76 YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAF 135
P+ TY LI+G C A+R+ +L M++ V P T +L+ R K F
Sbjct: 406 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 465
Query: 136 ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCL 195
+L E + +++ N EA AIL M + LP + ++ +
Sbjct: 466 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 525
Query: 196 VTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNV 255
V ++ +++ G+ P TY LL++ L + E + +N + RL+ +
Sbjct: 526 VEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 585
Query: 256 NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
SYN +I C +D+A ++ + M I + T++ LISG +++ L
Sbjct: 586 VSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQK 645
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
+++ P N M++ + A D EM++
Sbjct: 646 MMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 683
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 111/475 (23%), Positives = 222/475 (46%), Gaps = 47/475 (9%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N ++ +LVKS QQM + P+ T+NILI+ C++G++ A ++ ++
Sbjct: 71 FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL 130
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
+GY P++ T I GFC ++ + + + ++ + +L++G+ + +
Sbjct: 131 KMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 190
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A +LL R + ++ NT++ +S + ++A + +M
Sbjct: 191 AALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEM---------------- 234
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+ + + P TY L+ + G+ + N + + +
Sbjct: 235 -------------------VAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIK 275
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+V ++N+++D FCK + +A + M +DI PN+ TFNTL+ G CKD ++ + + +
Sbjct: 276 PDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTV 335
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
M+++ G KP+ T+ S++D C + A + M + GV N +YNI+I C
Sbjct: 336 FAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCK 395
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
I V ++++LF +M I PD+ T+N+LI C+ KI A + M G P+ +
Sbjct: 396 IKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIIT 455
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
Y++++ AL+ ++ G P+ +T ++++ L Q G+ E A +
Sbjct: 456 YNSILNALLT------------KLKDQGIQPNMHTDTILIKGLCQSGKLEAARKV 498
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 150/327 (45%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A ++L K+ GY P+ T + + +++ D + G +Y L+
Sbjct: 122 AFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLIN 181
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
L K G + L V + N YN VID K ++ A ++ EM + I+P
Sbjct: 182 GLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISP 241
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
++VT++ LI G ++ +L ++ KPD +TFN ++D C+ R + A + L
Sbjct: 242 DVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVL 301
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
M+ + PN T+N L+ C + +F M I P++ T+ +L+ +C +
Sbjct: 302 DMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLV 361
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
++ KA+K F +M G+ + SY+ +I K + D+A + F+ M PD T
Sbjct: 362 KQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTY 421
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERG 495
N +++ L + G+ A +V +RG
Sbjct: 422 NSLIDGLCKSGKISYAFQLVNEMHDRG 448
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 129/279 (46%), Gaps = 35/279 (12%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
N ++N++I+CFC++ ++ A + ++ P+++T NT I G C ++H+
Sbjct: 102 NFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFH 161
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRA----------------------------------- 338
L+ GF D+ ++ ++I+ LC+
Sbjct: 162 DKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKD 221
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
DA D SEMV + P+ +TY+ LIR +G + ++ LF KM + I PD+YTF
Sbjct: 222 KHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTF 281
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
N L+ FC+ +++KA+ M+ ++P+ +++ L+ K + E K F M +
Sbjct: 282 NILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMK 341
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G P+ T +++ + +A I T +RG++
Sbjct: 342 QGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVT 380
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 110/231 (47%)
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
+N ++ K + ++M I PN VTFN LI+ C+ + +L +L
Sbjct: 71 FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL 130
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
+ G++PD T N+ I C + AL+ ++V G + ++Y LI LC +G+
Sbjct: 131 KMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 190
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+L+L +++ + + +N +I + + A + M+ + PD +YSALI
Sbjct: 191 AALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALI 250
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+ G+ +A F M PD YT N++++ ++GR ++A +++
Sbjct: 251 RGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVL 301
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%)
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
F FN ++ L ++ + L +M G+ PN +T+NILI C +G + + + K
Sbjct: 69 FEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAK 128
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
+ PDI T N I+ FC +I +A ++ LG D SY LI L K G
Sbjct: 129 ILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGE 188
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
A Q ++ ++ N +++ + + +A D+ + IS
Sbjct: 189 TRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRIS 240
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 73/177 (41%), Gaps = 5/177 (2%)
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
++LL+ F P S I ++ + A+ + ++ +N ++ SL
Sbjct: 26 FLILLQKNFIP-----YSSISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVK 80
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
L L Q+M+ + I+P+ TFN LI FC++ I A +L +G PD +
Sbjct: 81 SKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIIT 140
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+ IK G+ +A + G + D + ++ L + G A +++
Sbjct: 141 LNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLR 197
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 212/457 (46%), Gaps = 5/457 (1%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N ++ AL+ + + A F +MS PD TY ++HG C G ++ A++L+ +M
Sbjct: 258 HNILLKALLSAGRLKDACQHFDEMS---SPPDVVTYGTMVHGYCVRGELENAVKLLDEMA 314
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G N YT +I CN +V++ RVLE M V + +++ G D
Sbjct: 315 AKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLA 374
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A L +R ++ L+ L EA +L++M D+G + T+ +
Sbjct: 375 AARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLI 434
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
++ E + + + R V P TY L + L K G + L+ + L
Sbjct: 435 DGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLE 494
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
NV +YN +I+ CK +++A I EM ++ T+ TLI CK E + +
Sbjct: 495 LNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNM 554
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L +L+ G KP T+N +++ C + R E L M+E V PN +TYN L++ C
Sbjct: 555 LQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCI 614
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
++ + +++ M + ++P+ T+N LI+ C+ +++A M+ GLR S
Sbjct: 615 DKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASS 674
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNG--CNPDSYT 467
YSALI+ L K +F EA+ F M G PD Y+
Sbjct: 675 YSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYS 711
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 216/494 (43%), Gaps = 50/494 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDR--FTYNILIHGICRIGVVD 62
G+SPS NAV+ L +D A F+++ PD+ ++NIL+ + G +
Sbjct: 223 GLSPSPESCNAVLSRL----PLDEAIALFREL------PDKNVCSHNILLKALLSAGRLK 272
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+A + +M P+V TY ++ G+C + ++L+ M + + N S++
Sbjct: 273 DACQHFDEMSS---PPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVI 329
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
L+CN S+A +L M G
Sbjct: 330 ---------------------------ALLCN--------KGQVSDALRVLEDMTMHGVA 354
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
++ F ++ + DL + + KRG+ T+ L+ L +AG E DR
Sbjct: 355 LDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRV 414
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + L +V +Y ++ID +CK M A + EM R +APN+VT+ L G CK
Sbjct: 415 LQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCK 474
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+V ELL + G + + +T+NS+I+ LC+ E A+ ++EM G + T
Sbjct: 475 QGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYT 534
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y LI +LC G+ R+ + Q+M I P I T+N L+ FC ++E +K ML
Sbjct: 535 YTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWML 594
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+RP+ +Y++L+K + + M P+ T N++++ + +
Sbjct: 595 EKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMK 654
Query: 483 EAHDIVKTSKERGI 496
EA + E+G+
Sbjct: 655 EALYFHQEMIEKGL 668
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 179/400 (44%), Gaps = 37/400 (9%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ G++ ++ VI + A F++M DR T+ LI+G+CR G
Sbjct: 348 MTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGE 407
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ EA R++++M G +V TYT+LIDG+C + E FRV M R V PN T +
Sbjct: 408 LKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTA 467
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L G+ + D A ELL + N+L+ L +A I+ +M G
Sbjct: 468 LSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAG 527
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ + T+ + L + + +L + +G+KP +T
Sbjct: 528 HRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIAT------------------ 569
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
YN++++ FC ++ ++ M ++++ PN+VT+N+L+ +
Sbjct: 570 -----------------YNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQY 612
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C D + T E+ + P++ T+N +I C+A ++AL EM+E G+
Sbjct: 613 CIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTA 672
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRIS--PDIYTF 398
+Y+ LIR L + + F KM+ + ++ PD+Y+F
Sbjct: 673 SSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSF 712
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 3/256 (1%)
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+F++ NV S+N+++ R + C+ + P++VT+ T++ G+C E
Sbjct: 246 LFRELPDKNVCSHNILLKALLSAG---RLKDACQHFDEMSSPPDVVTYGTMVHGYCVRGE 302
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ +LL + G + + + S+I LC + DAL L +M GV + + +
Sbjct: 303 LENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTT 362
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+I C+ GD+A + RLF++MQ ++ D T ALI CR ++++A++ M+ G
Sbjct: 363 VISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKG 422
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
L D +Y+ LI K G EA + M P+ T + + L +QG A+
Sbjct: 423 LDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAAN 482
Query: 486 DIVKTSKERGISFKSF 501
+++ +G+ +
Sbjct: 483 ELLHEMCNKGLELNVY 498
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 132/565 (23%), Positives = 237/565 (41%), Gaps = 74/565 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV---- 60
GI+P+T +N +I + ++ D A F+ M +CKPD T+ IL+ +C+ G+
Sbjct: 149 GIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKA 208
Query: 61 --------------------------------VDEALRLVKQMEGLGYAPNVYTYTILID 88
V EA + QME G+ P+ Y +ID
Sbjct: 209 FEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMID 268
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
G A E +VL+ M + P E T LV+ + + +A EL
Sbjct: 269 GLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRP 328
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
++ +L++ + + EA ++ +M + GY P+ T + L + +
Sbjct: 329 NSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSF 388
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ ++ G KP TY +++ L K GR R + + + +Y ++D FCK+
Sbjct: 389 EEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKL 448
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE----------------- 311
+D A ++ E+ +PNL +++L++G C V KT +
Sbjct: 449 GRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGL 508
Query: 312 -------------------LLVMLLECGFKPDKFTFNSMIDCLCRA--HRFEDALDCLSE 350
+ ++ G KPD T+N +I+ LCR+ +R E A L +
Sbjct: 509 CCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHD 568
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
+ + G P+ +TY L LC IG+V R++++ ++ + + D+ + AL C +
Sbjct: 569 LEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ 628
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+++A F M+ G PD +Y +I LIK + ++A + F M G P T
Sbjct: 629 VDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTA 688
Query: 471 ILETLVQQGRFEEAHDIVKTSKERG 495
+++ L G +EA ++ RG
Sbjct: 689 LVQALCHAGNVDEAFHRFESMLARG 713
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 131/498 (26%), Positives = 225/498 (45%), Gaps = 52/498 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P + +ID L KS + + A F++M CKP+ TY +I G+ +IG V A
Sbjct: 360 GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANA 419
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++K M G P+ TY L+DGFC R+ E ++L+ + + + PN SLV+G
Sbjct: 420 FRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNG 479
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ K + L S+AAA
Sbjct: 480 LCDGGSVEKTLDDLFE-------------------------QSKAAA------------- 501
Query: 185 SSTFDYTVTC-LVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
T D + C ++ GL L+E C I + G KP +TY +L+ L ++ R+
Sbjct: 502 -ETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRS-RENRV 559
Query: 240 DR---YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
+R L+ + K + + +Y + CK+ +DRA ++ E R ++V + L
Sbjct: 560 ERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTAL 619
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+G C +V + L ++ G PD + +I+ L + + EDA EM+ G
Sbjct: 620 CTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQ 679
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQA-DRISPDIYTFNALIQSFCRMNKIEKAE 415
P TY L+++LC G+V + F+ M A + + ++ALI FC+ K++ A
Sbjct: 680 KPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAAL 739
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
K F M++ G P + ++L L++SG+ ++A++ M G P + T IL+ L
Sbjct: 740 KLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799
Query: 476 VQQGRFEEAHDIVKTSKE 493
+ +E+ ++K +E
Sbjct: 800 RKS---DESGKLLKLVQE 814
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/520 (25%), Positives = 219/520 (42%), Gaps = 80/520 (15%)
Query: 17 IDALVKSNSIDLAYLKFQQMSVDQC--KPDRFTYNILIHGICRIGVVDEALRLVKQMEGL 74
+ A+++S + + F + + +Q + D FTYN L++ + + + ++M
Sbjct: 89 VAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKA 148
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
G APN +++ ILI F +R + EIMK + P+ T LV + + KA
Sbjct: 149 GIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKA 208
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP-ESSTFDYTVT 193
FE + +M G++P + + V
Sbjct: 209 FE-----------------------------------VFHEMMAMGFVPPDRALHTAMVR 233
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
L+ + E + K G P Y +++ L KAG E + L+++ V
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+Y ++++ CK ++RA E+ R M PN V + +LI G K + + L
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLF 353
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++E G++PD T MID LC++ FE A EM+ G PN +TY +I+ L I
Sbjct: 354 DEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKI 413
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK--------------AFF 419
G VA + R+ + M A PD T+ L+ FC++ ++++A + +
Sbjct: 414 GRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLY 473
Query: 420 SMLTLGL---------RPDNFSYS-------------ALIKALIKSGRFDEAKQTFLSME 457
S L GL D F S ++I L K+GR DEA + F M
Sbjct: 474 SSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMV 533
Query: 458 QNGCNPDSYTSNLILETLV--QQGRFEEA----HDIVKTS 491
GC PD+ T N+++ L ++ R E A HD+ K
Sbjct: 534 SEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVG 573
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 123/522 (23%), Positives = 213/522 (40%), Gaps = 39/522 (7%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN +++ LV + Y ++M P+ F++NILI R D+A+ + M+
Sbjct: 122 YNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMK 181
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVL-EIMKERNVCPNEATVRSLVHGVFRCLDP 131
P+++T+ IL+D C A + F V E+M V P+ A ++V + +
Sbjct: 182 RKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRV 241
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
+A E+ + + + NT++ L+ A EA +L M + +P T+
Sbjct: 242 KEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGIL 301
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
V L L + G +P Y L+ K+GR E + + +
Sbjct: 302 VNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGY 361
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+V ++ ++ID CK ++A + EM PN+VT+ T+I G K V
Sbjct: 362 RPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFR 421
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
++ ++ G PD T+ ++D C+ R ++A L E+ + PN Y+ L+ LC
Sbjct: 422 IMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLC 481
Query: 372 AIGDVARSL------------------------------------RLFQKMQADRISPDI 395
G V ++L R+FQ+M ++ PD
Sbjct: 482 DGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDA 541
Query: 396 YTFNALIQSFCRM--NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
T+N LI CR N++E+A + +G PD +Y+ L L K G D A +
Sbjct: 542 TTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKML 601
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G N D + L QG+ + A + + +G
Sbjct: 602 EEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQG 643
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 90/231 (38%), Gaps = 1/231 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P Y + L K +D A ++ S D Y L G+C G VD
Sbjct: 572 VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDR 631
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L ++M G AP+ Y +I+G K++ + + + M + P AT +LV
Sbjct: 632 AVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQ 691
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQK-LVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ + +AF + R L ++ + L++ A + M RG +
Sbjct: 692 ALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNV 751
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
P + T LV + +L G P +T+ +++ L K+
Sbjct: 752 PTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKS 802
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 207/444 (46%), Gaps = 5/444 (1%)
Query: 57 RIGVVDEALRLVKQM--EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPN 114
IG + EA+ ++ M +GL V IL+ + V V + M R V P+
Sbjct: 773 EIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAA--EMRLVEYAGNVFDEMSARGVYPD 830
Query: 115 EATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILR 174
T + ++ G R + +A + MER + ++ S+ + A
Sbjct: 831 SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 890
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
K+ G P + ++ L + + +L+ +K G KP T+ L+ L K G
Sbjct: 891 KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKG 950
Query: 235 RDVEGDR-YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
R +L + D NV++Y +I +CK + RA + M+++ + PN T+
Sbjct: 951 WTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTY 1010
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
TLI GHCK K EL+ ++ GF P+ T+NS++D LC+ R E+A L+ +
Sbjct: 1011 TTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQ 1070
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
+ + +TY ILI C D+ ++L KM PDI+ + LI +FCR N ++
Sbjct: 1071 NQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKD 1130
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
+EK F ++ LGL P +Y+++I + + A + F M +GC PDS + ++
Sbjct: 1131 SEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALIS 1190
Query: 474 TLVQQGRFEEAHDIVKTSKERGIS 497
L ++ R +EA + T ++G+S
Sbjct: 1191 GLCKESRLDEARQLYDTMIDKGLS 1214
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 207/447 (46%), Gaps = 39/447 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ +G+SP+ Y+++I L K S+ A+ ++M + KP+ +T+ LIHG+C+ G
Sbjct: 892 VTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGW 951
Query: 61 VDEALRL-VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+ A RL +K + Y PNV+TYT +I G+C ++++ + E MKE+ + PN T
Sbjct: 952 TERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYT 1011
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+L+ G + + KA+EL + M +
Sbjct: 1012 TLIDGHCKAGNFSKAYEL-----------------------------------MELMSNE 1036
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G+ P + T++ V L E +L+T + ++ TY +L+ K +
Sbjct: 1037 GFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQA 1096
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+LN +FK +++ Y +I FC+ NMM + ++ E+ +AP T+ ++I G
Sbjct: 1097 LVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICG 1156
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+C++ +V + + + G PD ++ ++I LC+ R ++A M++ G+ P
Sbjct: 1157 YCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPC 1216
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+T L C D A ++ + +++ I T + LI+ C K+ A F
Sbjct: 1217 EVTRVTLTYEYCKTEDFASAMVILERLNKKLW---IRTVHTLIRKLCCEKKVALAALFFH 1273
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRF 446
+L + D + +A A I+S ++
Sbjct: 1274 KLLDKEVNVDRVTLAAFNTACIESNKY 1300
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 199/446 (44%), Gaps = 1/446 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ +TR+ N +I + ++ A F +MS PD TY +I G CR G V EA
Sbjct: 791 GLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEA 850
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R + +M G+ + T T++I FC V + + + PN S++ G
Sbjct: 851 DRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISG 910
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAI-LRKMGDRGYLP 183
+ + +AFELL ++ +L++ L A + L+ + Y P
Sbjct: 911 LCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKP 970
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ ++ L+ + + ++G+ P +TY L++ KAG + +
Sbjct: 971 NVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELM 1030
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + N +YN ++D CK + A ++ I + VT+ LIS CK
Sbjct: 1031 ELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKR 1090
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
A++++ L + + GF+PD + ++I CR + +D+ E+++ G+ P TY
Sbjct: 1091 ADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETY 1150
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+I C V+ +++ FQKM +PD ++ ALI C+ +++++A + + +M+
Sbjct: 1151 TSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMID 1210
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEA 449
GL P + L K+ F A
Sbjct: 1211 KGLSPCEVTRVTLTYEYCKTEDFASA 1236
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 210/472 (44%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
GI P+ YN ++D+ K + +M C P+ TYN+LI+G+ + G ++
Sbjct: 228 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQ 287
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+ +M G + YTY LI G+ N +AE + E M + P AT S ++
Sbjct: 288 AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIY 347
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + A + L + L + NTL+Y +A + ++ P
Sbjct: 348 GLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFP 407
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + L +L + I G+ P TY +L+ K G +
Sbjct: 408 TIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFF 467
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + L + +Y I K+ RA + EM + P+L+ +N ++ G CK
Sbjct: 468 DEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKL 527
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + ELL ++ G PD T+ S+I R + EM+ G+ P+ +TY
Sbjct: 528 GNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTY 587
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+LI G + R+ F +MQ I P++ T+N+LI C++ ++++A F M+
Sbjct: 588 TVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVE 647
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G+ P+ +SY+ LI G + EA + M G PDS T + +L+ L
Sbjct: 648 KGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 227/488 (46%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
S ++ + +I K + ++ F +M + PD N ++ + ++ +A+ +
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 222
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
+ M G P + TY L+D +C +V + +L M+ R PN+ T L++G+ +
Sbjct: 223 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 282
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+ +A L+ ++ N L+Y N M +EA ++ +M +G P +T+
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ + L +++ L + + P +Y L+ + G ++ + +
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
L + +YN ++D C+ ++ A ++ EM + IAP++VT+ L++G CK +
Sbjct: 403 IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSM 462
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+E +L G + D + + + I + A EM+ G PP+ I YN+++
Sbjct: 463 AQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVD 522
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
LC +G++ + L QKM +D + PD T+ ++I + ++ K + F+ ML+ GL P
Sbjct: 523 GLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTP 582
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+Y+ LI GR + A F M++ G P+ T N ++ L + R ++A++
Sbjct: 583 SVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFF 642
Query: 489 KTSKERGI 496
E+GI
Sbjct: 643 AEMVEKGI 650
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 204/449 (45%), Gaps = 4/449 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P+ YN +I+ L K + A +M K +TYN LI+G G++ EA
Sbjct: 264 GCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEA 323
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L ++M G +P V TY I G C R+++ + L M N+ P+ + +L++G
Sbjct: 324 LSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYG 383
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + KAF L + NTLL L A + +M + G P+
Sbjct: 384 YCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPD 443
Query: 185 SSTFDYTV--TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
T+ V +C + L + + D + G++ Y + K G
Sbjct: 444 IVTYTILVNGSCKMGSLSMAQE--FFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSL 501
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ ++ YN+V+D CK+ ++ A+E+ ++M + P+ VT+ ++I H +
Sbjct: 502 QEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLE 561
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + K RE+ +L G P T+ +I R E A SEM E G+ PN IT
Sbjct: 562 NGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVIT 621
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN LI LC + + ++ F +M I P+ Y++ LI C M ++A + ML
Sbjct: 622 YNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQML 681
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
G++PD+ ++SAL+K L K + +Q
Sbjct: 682 DRGVQPDSCTHSALLKQLGKDCKLQAVRQ 710
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+YN ++D +CK + + ++ EM+ R APN VT+N LI+G K E + + L+ +
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
L+ G K +T+N +I +AL EMV G P TYN I LC +G +
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+ +++ M A+ + PD+ ++N LI +CR+ + KA F + ++ L P +Y+ L
Sbjct: 356 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 415
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ L + G + A+Q + M G PD T +++ + G A + G+
Sbjct: 416 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475
Query: 497 SFKSF 501
S+
Sbjct: 476 ELDSY 480
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 124/255 (48%)
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + K RL +V + N ++ ++M +A E+ R M + I P +VT+NTL+ +CK
Sbjct: 187 FDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCK 246
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+V + +LL + G P+ T+N +I+ L + FE A + EM++ G+ + T
Sbjct: 247 GGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYT 306
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN LI G +A +L L ++M SP + T+N+ I C++ ++ A + ML
Sbjct: 307 YNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDML 366
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
L PD SY+ LI + G +A F + P T N +L+ L +QG E
Sbjct: 367 ANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELE 426
Query: 483 EAHDIVKTSKERGIS 497
A + GI+
Sbjct: 427 VAQQLKVEMINEGIA 441
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 144/344 (41%), Gaps = 35/344 (10%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN +I + ++ A+L F ++ P TYN L+ G+CR G ++ A +L
Sbjct: 372 PDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQL 431
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+M G AP++ TYTIL++G C ++ + M + + + + G +
Sbjct: 432 KVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELK 491
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D +AF L + + ++ N ++ L EA+ +L+KM G +P+ T
Sbjct: 492 LGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVT 551
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + + L + I + +G+ P TY +L+ GR Y + +
Sbjct: 552 YTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQ 611
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRA-----------------------TEIC------ 278
+ ++ NV +YN +I+ CKV MD+A E C
Sbjct: 612 EKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQ 671
Query: 279 ------REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
++M DR + P+ T + L+ KD ++ R+L +L
Sbjct: 672 EALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLESLL 715
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH-KTRELLVMLLEC 319
+++ + N+M A + +R I N+ ++ G C +EV K +LL+ +
Sbjct: 121 ILEILAQNNLMRSAYWVM----ERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWV--- 173
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
++ SM+ E L +M++ + P+ N ++R L ++++
Sbjct: 174 ------YSKKSMV---------EQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKA 218
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+ +++ M I P I T+N L+ S+C+ K+++ M G P++ +Y+ LI
Sbjct: 219 VEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLING 278
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
L K G F++AK M + G +YT N ++ +G EA + + +G S
Sbjct: 279 LSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGAS 336
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 26/202 (12%)
Query: 320 GFKPDKFTFNSMIDCLCR------------------AHRFEDAL--DCLSEMVEWGVPPN 359
GF+ +F F ++++ L + HR D L C+S V +
Sbjct: 110 GFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKI--- 166
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
++LI V + L +F KM R+SPD+ N +++ + + KA + +
Sbjct: 167 ---LDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYR 223
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+M G++P +Y+ L+ + K G+ + M++ GC P+ T N+++ L ++G
Sbjct: 224 TMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKG 283
Query: 480 RFEEAHDIVKTSKERGISFKSF 501
FE+A ++ + G+ ++
Sbjct: 284 EFEQAKGLIGEMLKTGLKVSAY 305
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/508 (24%), Positives = 229/508 (45%), Gaps = 44/508 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P L +I +I+ A + ++ +PD F YN +I G C++ ++ A
Sbjct: 108 GYTPDVILCTKLIKGFFNFKNIEKAS-RVMEILESHTEPDVFAYNAVISGFCKVNQIEAA 166
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ +M+ G+ P++ TY I+I CN +++ VL+ + N P T L+
Sbjct: 167 TQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEA 226
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+EA +L +M RG LP+
Sbjct: 227 TIV-----------------------------------EGGINEAMKLLEEMLARGLLPD 251
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + + ++ + +G +P +Y +L+ A G+ EG++ +
Sbjct: 252 MYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVA 311
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+F N +Y+++I C+ +D A + + M ++++ P+ +++ LIS CK+
Sbjct: 312 EMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEG 371
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ ++ ++ G PD +N+++ LC+ AL+ +++ G PPN +YN
Sbjct: 372 RLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYN 431
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I +L + GD +R+L + M + I PD T+N+LI CR +E+A M
Sbjct: 432 TMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQS 491
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G RP SY+ ++ L K R D+A F M + GC P+ T L++E + G EA
Sbjct: 492 GFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEA 551
Query: 485 HDIVKTSKERGI----SF----KSFPGL 504
++ + R + SF K+FP L
Sbjct: 552 MELANSLFSRDVISQDSFKRLNKTFPML 579
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 142/270 (52%), Gaps = 1/270 (0%)
Query: 232 KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
KAG+ E +L + +V +I F +++A+ + E+ + P++
Sbjct: 90 KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRV-MEILESHTEPDVF 148
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
+N +ISG CK ++ ++L + GF PD T+N MI LC + AL L ++
Sbjct: 149 AYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQL 208
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
+ P ITY ILI + G + +++L ++M A + PD+YT+NA+I+ C+ +
Sbjct: 209 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 268
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
E+A + S+ + G PD SY+ L++A + G++DE ++ M GC P+ T +++
Sbjct: 269 ERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 328
Query: 472 LETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ +L + GR +EA ++K E+ ++ ++
Sbjct: 329 ISSLCRFGRIDEAISVLKVMIEKELTPDTY 358
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 133/581 (22%), Positives = 250/581 (43%), Gaps = 89/581 (15%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMS-----VDQCK---------------- 42
G S YNA+I ++++ +D A+L ++MS +D C
Sbjct: 199 FGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGD 258
Query: 43 -----------PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFC 91
PD YN ++ G+C + EA+ ++ +M + PNV TY IL+ G
Sbjct: 259 ALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCL 318
Query: 92 NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME-------- 143
++ R+L +M PN SLVH + D A++L + ++
Sbjct: 319 GKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYL 378
Query: 144 ------------------------REPLTQKLVCNTLLYRLSNNSMA---------SEAA 170
+ ++ L +L +++ ++ A +A
Sbjct: 379 LYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAF 438
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
I+ +M +G++P+ ST+ + L + + + + K G+ P TY +L+++
Sbjct: 439 EIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSF 498
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
KAG + + + + +D NV +Y +I + K + A ++ M PN+
Sbjct: 499 CKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNV 558
Query: 291 VTFNTLISGHCKDAEVHKTRELLVML--------LECGFK--------PDKFTFNSMIDC 334
VT+ LI GHCK ++ K ++ + ++ FK P+ T+ +++D
Sbjct: 559 VTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDG 618
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LC+A+R E+A + L M G PN I Y+ LI C G + + +F KM P+
Sbjct: 619 LCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPN 678
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+YT+++LI S + +++ K ML P+ Y+ +I L K G+ +EA + L
Sbjct: 679 LYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLML 738
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
ME+ GC P+ T +++ + G+ E+ ++ + +G
Sbjct: 739 KMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKG 779
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 209/477 (43%), Gaps = 24/477 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICR------I 58
G P+ ++N+++ A KS AY F++M C+P YNI I IC
Sbjct: 337 GCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGS 396
Query: 59 GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
+++ A + +M LG N + C A + + F ++ M + P+++T
Sbjct: 397 DLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTY 456
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMG 177
++ + KAF LL M++ + + T+L + +A +M
Sbjct: 457 SKVIGFLCDASKVEKAF-LLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEML 515
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-- 235
P T+ + + + + + + + G KP TY L++ KAG+
Sbjct: 516 RDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQID 575
Query: 236 -----------DVEG---DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
D+E D Y D N+ +Y ++D CK N ++ A E+ M
Sbjct: 576 KACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTM 635
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
PN + ++ LI G CK ++ +E+ V + E G+ P+ +T++S+I+ L + R
Sbjct: 636 SVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRL 695
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+ L LS+M+E PN + Y +I LC +G + RL KM+ P++ T+ A+
Sbjct: 696 DLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAM 755
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
I F ++ KIE+ + + M + G P+ +Y LI +G DEA + M+Q
Sbjct: 756 IDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQ 812
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/479 (26%), Positives = 215/479 (44%), Gaps = 26/479 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI PS Y +ID+ K+ I A F +M D C P+ TY LIH + V +A
Sbjct: 483 GIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDA 542
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK--------------ERN 110
+L + M G PNV TYT LIDG C A ++ + ++ M+ + N
Sbjct: 543 NKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDN 602
Query: 111 VC--PNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE 168
C PN T +LV G+ + +A ELL ++V + L+
Sbjct: 603 DCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLEN 662
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A + KM +RGY P T+ + L L+ +L ++ P Y +++
Sbjct: 663 AQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMID 722
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
L K G+ E R + + + NV +Y +ID F K+ +++ E+ R+M + AP
Sbjct: 723 GLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAP 782
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
N +T+ LI+ C + + LL + + + ++ +I+ R F ++ L
Sbjct: 783 NFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNR--EFITSIGLL 840
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI-----YTFNALIQ 403
E+ E P Y ILI + G + +L L +++ + SP + Y + +LI+
Sbjct: 841 DELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISS---SPSLAVANKYLYTSLIE 897
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
S +K++KA + + SM+ + P+ ++ LIK L + G++ EA Q S+ Q C+
Sbjct: 898 SLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSICQMVCH 956
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 136/522 (26%), Positives = 225/522 (43%), Gaps = 39/522 (7%)
Query: 4 LGISPSTRLYNAVIDALV--KSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
+G S + +YNA+I+ L N+ +++ Q+ D + R N LI CR G+
Sbjct: 127 IGYSHTPVVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNFLIQKCCRNGMW 186
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
+ AL + +++ GY + TY LI F A ++ F V M + T+
Sbjct: 187 NVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCF 246
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLV-CNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + + A LL E+E V N ++ L S+ EA IL +M
Sbjct: 247 AYSLCKAGRCGDALSLL----EKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSIS 302
Query: 181 YLPESSTFDYTVT-CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
+P T+ ++ CL G L IL + G P + L+ A Y RD
Sbjct: 303 CIPNVVTYRILLSGCLGKG-QLGRCKRILSMMMTEGCYPNREMFNSLVHA-YCKSRDYS- 359
Query: 240 DRYLNHVFKDRLVSNVNS----YNMVIDCFCK------VNMMDRATEICREMRDRDIAPN 289
Y +FK + YN+ I C ++++ A + EM D + N
Sbjct: 360 --YAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLN 417
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
V + C + K E++ ++ GF PD T++ +I LC A + E A
Sbjct: 418 KVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFE 477
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
EM + G+ P+ TY ILI S C G + ++ F +M D +P++ T+ +LI ++ +
Sbjct: 478 EMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKAR 537
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME------------ 457
K+ A K F ML G +P+ +Y+ALI K+G+ D+A Q + M+
Sbjct: 538 KVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYF 597
Query: 458 ---QNGC-NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
N C P+ T +++ L + R EEAH+++ T G
Sbjct: 598 KLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNG 639
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 116/515 (22%), Positives = 218/515 (42%), Gaps = 54/515 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y+ VI L ++ ++ A+L F++M + P +TY ILI C+ G++ +A
Sbjct: 448 GFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQA 507
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+M PNV TYT LI + A++V + ++ E+M PN T +L+ G
Sbjct: 508 RNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDG 567
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KA ++ R M+ + + + + ++L +N + P
Sbjct: 568 HCKAGQIDKACQIYAR-MQGDIESSDI---DMYFKLDDNDCET---------------PN 608
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ V L + E +LDT G +P Y L++ K G+
Sbjct: 609 IITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFV 668
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N+ +Y+ +I+ K +D ++ +M + PN+V + +I G CK
Sbjct: 669 KMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVG 728
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L++ + E G P+ T+ +MID + + E L+ +M G PN ITY
Sbjct: 729 KTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYR 788
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR----------------- 407
+LI C+ G + + RL +M+ I ++ +I+ F R
Sbjct: 789 VLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGLLDELSENES 848
Query: 408 -------------MNKIEKAEKAFFSMLTLGLRP-----DNFSYSALIKALIKSGRFDEA 449
K + E A + + P + + Y++LI++L + + D+A
Sbjct: 849 VPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKA 908
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ + SM P+ T +++ L + G+++EA
Sbjct: 909 FELYASMINKNVVPELSTFVHLIKGLTRVGKWQEA 943
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 115/281 (40%), Gaps = 44/281 (15%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+YN +I F + + +D A + REM + + T CK + + L +L
Sbjct: 207 TYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAG---RCGDALSLL 263
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
+ F PD +N M+ LC A F++A+D L M PN +TY IL+ G +
Sbjct: 264 EKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQL 323
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRM---------------------------- 408
R R+ M + P+ FN+L+ ++C+
Sbjct: 324 GRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIF 383
Query: 409 -------------NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
+ +E AEKA+ ML LG+ + + S + L +G+FD+A +
Sbjct: 384 IGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICE 443
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M G PD T + ++ L + E+A + + K+ GI
Sbjct: 444 MMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGI 484
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 222/472 (47%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +Y I A VK + + F +M D+ P F YN+LI G+C++ + +A +L
Sbjct: 550 PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQL 609
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+M P++ TY LIDG+C + F+V E MK N+ P+ T +L+ G+F+
Sbjct: 610 FDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFK 669
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
A +L ++ + + L S+N A A + D G + T
Sbjct: 670 AGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYT 729
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ L + + IL + +G+ P Y +++ + G V ++ +
Sbjct: 730 CSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAME 789
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K + + +YN +I FC++ M+ A + +M+ + ++P++ T+N LI G+ + E
Sbjct: 790 KQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFD 849
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
K +LL + + G P+ ++ ++I+CLC+ + +A +M + GV PN YN+LI
Sbjct: 850 KCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLI 909
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
C+ G + + R ++M I ++ T+N LI K+ +AE + GL+
Sbjct: 910 DGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLK 969
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
PD F+Y++LI +G + M+ +G P T +L++ ++G
Sbjct: 970 PDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEG 1021
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 227/493 (46%), Gaps = 2/493 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI PS+ ++D LVK+ + F + +P +F Y I ++ V +
Sbjct: 512 GIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKG 571
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M+ +P V+ Y +LIDG C +++ + ++ + M R + P+ T +L+ G
Sbjct: 572 LELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDG 631
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ +P K+F++ R M+ + + L+ NTLL L M +A +L +M D+G++P
Sbjct: 632 YCKDGNPEKSFKVRER-MKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVP 690
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ TF + + G+ +T + G+K T +L+ AL K G+ + + L
Sbjct: 691 DAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEIL 750
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
LV N YN +ID + + + A M + + P+ + +N LI C+
Sbjct: 751 GREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCEL 810
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + + + G P T+N +I R + F+ D L EM + G PN ++Y
Sbjct: 811 GDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSY 870
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI LC + + + + M+ +SP++ +N LI C KIE A + M
Sbjct: 871 GTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFK 930
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ + +Y+ LI L +G+ EA+ L + + G PD +T N ++ G +
Sbjct: 931 KGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQR 990
Query: 484 AHDIVKTSKERGI 496
+ + K GI
Sbjct: 991 CIALYEEMKTSGI 1003
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 118/523 (22%), Positives = 234/523 (44%), Gaps = 37/523 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS YN +ID K + + ++ ++M D +P T+N L+ G+ + G+V++A +
Sbjct: 620 PSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENV 679
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M+ G+ P+ +T++IL DG+ + + V E + + N T L++ + +
Sbjct: 680 LTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCK 739
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
KA E+L R M + + +++ NT++ S A + M +G P+
Sbjct: 740 EGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLA 799
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR---YLN 244
++ + D+ ++ +GV P TY +L+ GR E D+ L
Sbjct: 800 YNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGY---GRKYEFDKCFDLLK 856
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + NV SY +I+C CK + + A + R+M DR ++PN+ +N LI G C
Sbjct: 857 EMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKG 916
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + + G + + T+N++ID L + +A D L E+ G+ P+ TYN
Sbjct: 917 KIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYN 976
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRI-------------------------------SP 393
LI G+V R + L+++M+ I P
Sbjct: 977 SLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQP 1036
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
D+ +N ++ + ++KA M+ + D +Y++LI +K G+ E +
Sbjct: 1037 DLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLI 1096
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M+ P++ T ++I++ + + A+ + +E+G+
Sbjct: 1097 DEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGL 1139
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 159/338 (47%)
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
L+ + M SEAA + + + G P S + + LV T + ++ +P
Sbjct: 492 LNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 551
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
Y ++A K +G N + DR+ V YN++ID CKV M A ++
Sbjct: 552 KFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFD 611
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
EM R + P+L+T+NTLI G+CKD K+ ++ + +P TFN+++ L +A
Sbjct: 612 EMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAG 671
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
EDA + L+EM + G P+ T++IL + +L +++ + + YT +
Sbjct: 672 MVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCS 731
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
L+ + C+ +IEKAE+ + GL P+ Y+ +I + G A+ +ME+
Sbjct: 732 ILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQ 791
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G PD N ++ T + G E A V K +G+S
Sbjct: 792 GMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVS 829
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 188/452 (41%), Gaps = 39/452 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ LYN +ID + + A +K M KPD YN LI C +G ++ A
Sbjct: 757 GLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENA 816
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ V +M+ G +P+V TY ILI G+ + F +L+ M++ PN + +L++
Sbjct: 817 EQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLIN- 875
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
CL K +LL EA + R M DRG P
Sbjct: 876 ---CL--CKGSKLL-----------------------------EAQIVKRDMEDRGVSPN 901
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + + + + + K+G++ TY L++ L G+ E + L
Sbjct: 902 VRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLL 961
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L +V +YN +I + + R + EM+ I P L T++ LIS C
Sbjct: 962 EISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLIS-LCTKE 1020
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ T+++ E +PD +N ++ C + A + +M+E + + TYN
Sbjct: 1021 GIELTKKIFG---EMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYN 1077
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI +G + L +M+A + P+ T++ +++ C M A + M
Sbjct: 1078 SLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEK 1137
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
GL D L+ L + R EA+ M
Sbjct: 1138 GLLLDVCIGDELVSGLKEEWRSKEAENVISEM 1169
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 193/453 (42%)
Query: 46 FTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEI 105
F+Y +L + ++ EA L + G P+ + T+L+D K+ V
Sbjct: 483 FSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLN 542
Query: 106 MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSM 165
+ E + P++ + + D K EL R + N L+ L
Sbjct: 543 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQ 602
Query: 166 ASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLL 225
+A + +M R LP T++ + + ++ + + ++P T+
Sbjct: 603 MKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNT 662
Query: 226 LMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
L++ L+KAG + + L + V + +++++ D + + D A + D
Sbjct: 663 LLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSG 722
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
+ N T + L++ CK+ ++ K E+L + G P++ +N+MID R A
Sbjct: 723 LKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGAR 782
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+ M + G+ P+ + YN LIR+ C +GD+ + + KM+ +SP + T+N LI +
Sbjct: 783 MKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGY 842
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
R + +K M G P+ SY LI L K + EA+ ME G +P+
Sbjct: 843 GRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNV 902
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
N++++ +G+ E+A + ++GI
Sbjct: 903 RIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIEL 935
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 109/232 (46%)
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
M+ A ++ +R+ I P+ + L+ K + T + + +LE F+P KF +
Sbjct: 497 MISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYG 556
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
I + L+ + M + P YN+LI LC + + + +LF +M A
Sbjct: 557 KAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLAR 616
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
R+ P + T+N LI +C+ EK+ K M + P +++ L+K L K+G ++A
Sbjct: 617 RLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDA 676
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ M+ G PD++T +++ + + + A + +T+ + G+ ++
Sbjct: 677 ENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAY 728
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 4/175 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ + Y+ +I +L I+L F +MS+ +PD YN ++H G +D+A
Sbjct: 1002 GIKPTLKTYHLLI-SLCTKEGIELTKKIFGEMSL---QPDLLVYNGVLHCYAVHGDMDKA 1057
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L KQM + TY LI G ++ EV +++ MK R + P T +V G
Sbjct: 1058 FNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKG 1117
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
D A+ E+ L + + L+ L + EA ++ +M R
Sbjct: 1118 HCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGR 1172
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ + P +YN V+ +D A+ +QM D+ TYN LI G ++G + E
Sbjct: 1032 MSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCE 1091
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L+ +M+ P TY I++ G C K + M+E+ + + LV
Sbjct: 1092 VRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVS 1151
Query: 124 GV 125
G+
Sbjct: 1152 GL 1153
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 213/467 (45%), Gaps = 36/467 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P + +N ++ +V S+S + + F + + D +++ ILI G C G ++++
Sbjct: 124 GFVPGSNCFNYLLTFVVGSSSFN-QWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKS 182
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ ++ G++PNV YT LIDG C + + + M + + NE T L++G
Sbjct: 183 FDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING 242
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F+ + FE+ + E N ++ +L + +A + +M +RG
Sbjct: 243 LFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCN 302
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L + LNE ++D G+ P
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP-------------------------- 336
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
N+ +YN +ID FC V + +A +CR+++ R ++P+LVT+N L+SG C+
Sbjct: 337 ---------NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +++ + E G KP K T+ +ID R+ E A+ M E G+ P+ TY+
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYS 447
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI C G + + RLF+ M P+ +N +I +C+ +A K M
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
L P+ SY +I+ L K + EA++ M +G +P + +LI
Sbjct: 508 ELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 213/487 (43%), Gaps = 71/487 (14%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
RLY +I++ V+S S++L+ F +M + P +N L+ + ++ +
Sbjct: 95 RLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE 154
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
+ +VY++ ILI G C A +
Sbjct: 155 NKS-KVVLDVYSFGILIKGCCEAGEI---------------------------------- 179
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
K+F+LLI E ++ TL+ +A + +MG
Sbjct: 180 -EKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGK------------ 226
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
GL NE TY +L+ L+K G +G + +D
Sbjct: 227 ------LGLVANE-----------------RTYTVLINGLFKNGVKKQGFEMYEKMQEDG 263
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+ N+ +YN V++ CK A ++ EMR+R ++ N+VT+NTLI G C++ ++++
Sbjct: 264 VFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEAN 323
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+++ + G P+ T+N++ID C + AL ++ G+ P+ +TYNIL+
Sbjct: 324 KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C GD + + ++ ++M+ I P T+ LI +F R + +EKA + SM LGL PD
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDV 443
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+YS LI G+ +EA + F SM + C P+ N ++ ++G A ++K
Sbjct: 444 HTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKE 503
Query: 491 SKERGIS 497
+E+ ++
Sbjct: 504 MEEKELA 510
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 176/367 (47%), Gaps = 37/367 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ + R Y +I+ L K+ + +++M D P+ +TYN +++ +C+ G +
Sbjct: 227 LGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKD 286
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ +M G + N+ TY LI G C ++ E +V++ MK + PN T +L+
Sbjct: 287 AFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLID 346
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G KA L R ++ L+ LV N L+ S AA ++++M +RG
Sbjct: 347 GFCGVGKLGKALS-LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T YT+ ++DTF + + L ME L
Sbjct: 406 PSKVT--YTI--------------LIDTFARSDNMEKAIQLRLSMEEL------------ 437
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
LV +V++Y+++I FC M+ A+ + + M +++ PN V +NT+I G+CK
Sbjct: 438 -------GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCK 490
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ ++ +LL + E P+ ++ MI+ LC+ + ++A + +M++ G+ P+T
Sbjct: 491 EGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSI 550
Query: 363 YNILIRS 369
+++ R+
Sbjct: 551 LSLISRA 557
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 137/281 (48%), Gaps = 1/281 (0%)
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
K +F Y +++ + ++ Y N + + V N +N ++ + ++
Sbjct: 91 KTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWS 150
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
E + + + ++ +F LI G C+ E+ K+ +LL+ L E GF P+ + ++ID C
Sbjct: 151 FFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCC 209
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
+ E A D EM + G+ N TY +LI L G + +++KMQ D + P++Y
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
T+N ++ C+ + + A + F M G+ + +Y+ LI L + + +EA + M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ +G NP+ T N +++ G+ +A + + K RG+S
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS 370
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 203/453 (44%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D +N LI G CR+G AL + +M G +V Y L+ GFC A +V VL
Sbjct: 168 DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVL 227
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
++MKE V PN AT + R +AF+L + L + + L+ L +
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
SEA A+ R+M G +P T+ + L E +L + RGV TY
Sbjct: 288 GRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
LM+ L K G+ E L D L N +Y ++ID CK + +D A ++ EM +
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
+ I+PN+VTF+++I+G K + K E M+ E G P+ T+ ++ID + +
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
AL+ +M+ GV N + L+ L G + ++ LF+ +S D + LI
Sbjct: 468 ALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ + A K ++ + PD Y+ I L G+F EAK M G P
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKP 587
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
D T N ++ + ++G +A ++ K I
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 213/472 (45%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y A++D L K D + D + TY +LI +C+ VDEA +++ +ME
Sbjct: 347 YTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEME 406
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
+PNV T++ +I+GF + + +MKER + PN T +L+ G F+
Sbjct: 407 EKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQD 466
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A E+ + K + ++L+ L N EA A+ + G + + +
Sbjct: 467 AALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLI 526
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L D+ + R + P Y + + L G+ E L + L
Sbjct: 527 DGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLK 586
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+ ++YN +I C+ +A ++ EM+ I PNL+T+NTL++G V K + L
Sbjct: 587 PDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYL 646
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L ++ GF P T ++ ++ R + LD M+ G+ + YN L++ LC
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G ++ + ++M I+PD TFNALI C+ + ++ A + ML + P+ +
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
++ L+ L GR EA + ME++G P++ T ++++ +Q EA
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEA 818
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 134/548 (24%), Positives = 223/548 (40%), Gaps = 72/548 (13%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y +IDAL K++++D A +M P+ T++ +I+G + G++D+A + M+
Sbjct: 382 YTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMK 441
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV------- 125
G PNV TY LIDGF + V M V N+ V SLV+G+
Sbjct: 442 ERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIE 501
Query: 126 ----------------------------FRCLDPHKAFELLIRFMEREPLTQKLVCNTLL 157
F+ D AF+ M+R L +V N +
Sbjct: 502 EAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFI 561
Query: 158 YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK 217
L EA +IL +M + G P+ ST++ + + + +L +K
Sbjct: 562 NCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIK 621
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYL---------------------------------- 243
P TY L+ L+ G VE +YL
Sbjct: 622 PNLITYNTLVAGLFGTGA-VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILD 680
Query: 244 --NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ L +++ YN ++ C M +AT + EM IAP+ +TFN LI GHC
Sbjct: 681 IHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHC 740
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + + +L P+ TFN+++ L R +A L EM + G+ PN +
Sbjct: 741 KSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNL 800
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY+IL+ + ++RL+ +M P + T+NALI F + + +A++ F M
Sbjct: 801 TYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDM 860
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G+ P + +Y L+ + E K+ M++ G +P T + I + G
Sbjct: 861 QKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMT 920
Query: 482 EEAHDIVK 489
+A ++K
Sbjct: 921 WQAQRLLK 928
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 161/350 (46%), Gaps = 16/350 (4%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD-YTVTCLVTGLDLNETCGILDTFI 212
N LL LS+++ A A+L +M RG +P FD TV L+ GL N
Sbjct: 107 NILLAALSDHA---HAPAVLAEMCKRG-VP----FDGVTVNTLLAGLCRNGQVDAAAALA 158
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS-----NVNSYNMVIDCFCK 267
RG ++ AG GD DR+ + +V YN ++ FC+
Sbjct: 159 DRG--GGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+D A + M++ + PN+ T+ I +C+ V + +L ++ G D T
Sbjct: 217 AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVT 276
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
++++ LCR RF +A EM + G PN +TY LI SL G L L +M
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ + D+ T+ AL+ + K ++ + L+ L + +Y+ LI AL K+ D
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVD 396
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
EA+Q L ME+ +P+ T + ++ V++G ++A + + KERGI+
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGIN 446
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 171/418 (40%), Gaps = 37/418 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ-CKPDRFTYNILIHGICRIGVVDE 63
G+S Y +ID L K+ + A+ KF Q +D+ PD YN+ I+ +C +G E
Sbjct: 514 GLSLDHVNYTTLIDGLFKAGDMPTAF-KFGQELMDRNMLPDAVVYNVFINCLCILGKFKE 572
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ +M +G P+ TY +I C A+ ++L MK ++ PN T +LV
Sbjct: 573 AKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632
Query: 124 GVFRCLDPHKAFELLIRFMER----EPLTQK----------------------------- 150
G+F KA LL + LT +
Sbjct: 633 GLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHA 692
Query: 151 --LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
V NTLL L + M +A +L +M G P++ TF+ + L+
Sbjct: 693 DITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATY 752
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ + + P +T+ L+ L GR E L + K L N +Y++++ K
Sbjct: 753 AQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQ 812
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+ A + EM + P + T+N LIS K + + +EL + + G P T+
Sbjct: 813 SNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTY 872
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
+ ++ R + CL +M E G P+ T + + R+ G ++ RL + +
Sbjct: 873 DILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 197/457 (43%), Gaps = 13/457 (2%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D + N L++ CR+ ++ A+ L++ P Y IL+ + A VL
Sbjct: 72 DPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAALSDH---AHAPAVL 123
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
M +R V + TV +L+ G+ R A L R L + NTL+
Sbjct: 124 AEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHAL-DVIGWNTLIAGYCRV 182
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
A ++ +M +G + ++ V ++ G+LD + GV P +TY
Sbjct: 183 GDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATY 242
Query: 224 LLLMEALYKAGRDVEG--DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+ Y + VE D Y V ++ ++ +V + + ++ C+ A + REM
Sbjct: 243 TPFI-VYYCRTKGVEEAFDLYEGMV-RNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM 300
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
PN VT+ TLI K + LL ++ G D T+ +++D L + +
Sbjct: 301 DKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKT 360
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
++ D L + + N +TY +LI +LC +V + ++ +M+ ISP++ TF+++
Sbjct: 361 DEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I F + ++KA + M G+ P+ +Y LI K D A + + M G
Sbjct: 421 INGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGV 480
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
+ + + ++ L Q G+ EEA + K + G+S
Sbjct: 481 EVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSL 517
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 149/340 (43%), Gaps = 14/340 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P YN +I + + A +M + KP+ TYN L+ G+ G V++
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV- 122
A L+ +M G++P+ T+ ++ ++R+ + + E M + + +L+
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702
Query: 123 ----HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
HG+ R KA +L + + N L+ +S A A +M
Sbjct: 703 VLCYHGMTR-----KATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLH 757
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+ P +TF+ + L + + E +L K G++P TY +L+ K VE
Sbjct: 758 QNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVE 817
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
R + V V++YN +I F K MM +A E+ ++M+ R + P T++ L+S
Sbjct: 818 AMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVS 877
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
G + + ++ L + E GF P K T + +CRA
Sbjct: 878 GWSRIRNGTEVKKCLKDMKEKGFSPSKGT----LSFICRA 913
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 126/477 (26%), Positives = 230/477 (48%), Gaps = 4/477 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKPDRFTYNILIHGICRIGVVDE 63
G++P YN +ID K I A ++++ P+ +YN++I+G+C+ G DE
Sbjct: 214 GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDE 273
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ + +M+ ++YTY+ LI G C + + RV + M E V P+ ++++
Sbjct: 274 SFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLN 333
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G R + EL + ME+E + N L+ L N+ EA +I + ++
Sbjct: 334 GYLRAGRIEECLELW-KVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCA 392
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIK-RGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+S T+ V L LN+ IL+ RG F+ Y ++ L + GR E
Sbjct: 393 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFA-YSSMINGLCREGRLDEVAGV 451
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L+ + K N + N VI+ F + + ++ A M + P +VT+NTLI+G K
Sbjct: 452 LDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSK 511
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ L+ +L G+KP+ T++ +++ LC+ + + AL+ + +E G P+
Sbjct: 512 AERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKM 571
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+NI+I LC+ G V +L+L+ +M+ + P++ T N L++ F ++ E+A K + +L
Sbjct: 572 HNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHIL 631
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
G +PD SY+ +K L R +A G P + T N+++ ++ G
Sbjct: 632 QYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNG 688
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 223/499 (44%), Gaps = 16/499 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLA---YLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
G P R YN++++AL++SN D A +L F+ M + P+ TYNILI CR
Sbjct: 108 FGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLS---PNLQTYNILIKISCRKKQ 164
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
D+A L+ M G++P+V++Y LI+ +++ ++ + M ER V P+ A
Sbjct: 165 FDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNI 224
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDR 179
L+ G F+ D A E+ R ++ + + N ++ L E+ I +M
Sbjct: 225 LIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKN 284
Query: 180 GYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
E YT + L+ GL +L+ + + GV P Y ++ +AGR
Sbjct: 285 ----ERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 340
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
+E L V + V SYN++I + +D A I + ++D + +T+
Sbjct: 341 -IEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGV 399
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
L+ G CK+ ++K +L D F ++SMI+ LCR R ++ L +M + G
Sbjct: 400 LVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 459
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
PN N +I + +LR F M + P + T+N LI + + +A
Sbjct: 460 CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAY 519
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
ML G +P+ +YS L+ L + + D A + + G PD N+I+ L
Sbjct: 520 ALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGL 579
Query: 476 VQQGRFEEAHDIVKTSKER 494
G+ E+A + K+R
Sbjct: 580 CSSGKVEDALQLYSEMKQR 598
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 224/485 (46%), Gaps = 2/485 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP+ + YN +I + D A M PD F+Y LI+ + + G + +
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSD 202
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE-IMKERNVCPNEATVRSLV 122
AL+L +M G P+V Y ILIDGF + + E ++K +V PN + ++
Sbjct: 203 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 262
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G+ +C ++FE+ R + E +TL++ L + A + ++M + G
Sbjct: 263 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ ++ + + + E + K G + S Y +L+ L++ + E
Sbjct: 323 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS-YNILIRGLFENAKVDEAISI 381
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + ++ +Y +++ CK +++A I E + + ++++I+G C+
Sbjct: 382 WELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCR 441
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + +L + + G KP+ N++I+ RA + EDAL MV G P +T
Sbjct: 442 EGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVT 501
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN LI L + + L ++M P++ T++ L+ C+ K++ A + L
Sbjct: 502 YNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQAL 561
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G +PD ++ +I L SG+ ++A Q + M+Q C P+ T N ++E + FE
Sbjct: 562 EKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFE 621
Query: 483 EAHDI 487
A I
Sbjct: 622 RASKI 626
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/495 (20%), Positives = 224/495 (45%), Gaps = 3/495 (0%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G S + +++ ++ L + + + +CK +I + + D
Sbjct: 36 FPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPD 95
Query: 63 EALRLVKQM-EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
+AL + ++M E G P + +Y L++ + + E + + PN T L
Sbjct: 96 QALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNIL 155
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ R KA ELL E+ TL+ L+ N S+A + +M +RG
Sbjct: 156 IKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGV 215
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKR-GVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ + ++ + D+ I + +K V P +Y +++ L K G+ E
Sbjct: 216 TPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESF 275
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + K+ ++ +Y+ +I C +D AT + +EM + ++P++V +NT+++G+
Sbjct: 276 EIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGY 335
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ + + EL ++ + G + ++N +I L + ++A+ + E ++
Sbjct: 336 LRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADS 394
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TY +L+ LC G + ++L + ++ + R D + ++++I CR ++++
Sbjct: 395 MTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQ 454
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G +P+ +A+I +++ + ++A + F +M GC P T N ++ L + R
Sbjct: 455 MTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAER 514
Query: 481 FEEAHDIVKTSKERG 495
F EA+ +VK +G
Sbjct: 515 FSEAYALVKEMLHKG 529
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 120/239 (50%), Gaps = 2/239 (0%)
Query: 261 VIDCFCKVNMMDRATEICREMRD-RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
VI + K +M D+A +I + M + P + ++N+L++ + + + +
Sbjct: 84 VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G P+ T+N +I CR +F+ A + L+ M E G P+ +Y LI SL G ++ +
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT-LGLRPDNFSYSALIK 438
L+LF +M ++PD+ +N LI F + I A + + +L + P+ SY+ +I
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
L K G+FDE+ + + M++N D YT + ++ L G + A + K E G+S
Sbjct: 264 GLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 124/490 (25%), Positives = 211/490 (43%), Gaps = 39/490 (7%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ YNA+I AL + + A M +PD FT+N LI G CR +D A
Sbjct: 126 APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQD 185
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L +M G++ + +Y LI+GFC RV E + +++ P+ T +LV G
Sbjct: 186 LFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKG-- 239
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
L + E +L+KM + G+ P +
Sbjct: 240 ---------------------------------LCDARRGEEGLYMLQKMKELGWRPATR 266
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ V E +L+ G+ P T ++ A + GR R +
Sbjct: 267 AYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESM 326
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
NV +YN ++ FC V + +A + +MR+ + P++VT+N LI G C D +
Sbjct: 327 KLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHI 386
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
LL ++ G D++T+N +ID LC+ + ++A + G+ PN++T+N +
Sbjct: 387 ESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTV 446
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I LC G + +KM + +PD YT++ I++ C+ + ML +
Sbjct: 447 INGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDV 506
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+P +Y+ +I L K + A + + M GC+PD T + +GR EA +
Sbjct: 507 KPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAEN 566
Query: 487 IVKTSKERGI 496
+V K+ GI
Sbjct: 567 VVMEMKKGGI 576
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 210/463 (45%), Gaps = 4/463 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P +N++I ++ +D+A F +M + D +Y LI G C G VDEA
Sbjct: 159 GWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEA 218
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +++E P++YT+ L+ G C+A+R E +L+ MKE P +LV
Sbjct: 219 LELFRELE----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDL 274
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R +A ++L + + + C ++ S A + M +G P
Sbjct: 275 WCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPN 334
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ V + + +LD + GV+P TY LL+ G R L
Sbjct: 335 VWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLR 394
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L ++ +YN++ID CK +D A + + R I PN VTFNT+I+G CK
Sbjct: 395 LMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGG 454
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ L ++ G PD +T++ I+ LC+ + L + EM++ V P+T+ Y
Sbjct: 455 KFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYT 514
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+I L + + R++ +M + SPD+ T+ ++++C ++ +AE M
Sbjct: 515 IVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKG 574
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
G+ D +Y+ LI G+ D A M P+ +T
Sbjct: 575 GIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFT 617
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/541 (24%), Positives = 228/541 (42%), Gaps = 61/541 (11%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P+TR Y A++D + + A +M + P T +++ CR G +
Sbjct: 259 LGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSG 318
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+R+ + M+ G PNV+TY ++ GFCN +V + +L+ M+E V P+ T L+
Sbjct: 319 AVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIR 378
Query: 124 GVFRCLDPH--KAFELLIRFMEREPL-TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
G +C+D H AF LL R ME L + N L+ L EA ++ + RG
Sbjct: 379 G--QCIDGHIESAFRLL-RLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRG 435
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P S TF+ + L G + C L+ + G P TY +E L K EG
Sbjct: 436 IRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGL 495
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+++ + + + + +Y +VID K AT I +M +P++VT+ T + +
Sbjct: 496 SFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAY 555
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C + +H+ +++ + + G D +N++ID + + A+ L M PN
Sbjct: 556 CNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNH 615
Query: 361 ITYNIL----------------IRSLCAIGDVARSLRLFQKMQADRI------------- 391
T+ IL S+ ++A LF+ M+ + +
Sbjct: 616 FTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEG 675
Query: 392 ------------------------SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+ DIYT +L+ FC++ A SM+ G
Sbjct: 676 FSEERRLDEVTSLVSHMKEDDLPLNEDIYT--SLVNCFCKLRMYPDAWALLCSMIGHGFL 733
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P+ SY L+ G+ D AK+ F + N D +I++ L++QG + HD+
Sbjct: 734 PNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDM 793
Query: 488 V 488
+
Sbjct: 794 I 794
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/493 (21%), Positives = 191/493 (38%), Gaps = 63/493 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YNA++ + A QM +PD TYN+LI G C G ++ A
Sbjct: 330 GCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESA 389
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL++ MEG G A + YTY +LID C +V E + + ++ R + PN T ++++G
Sbjct: 390 FRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVING 449
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-----RLSNNSMASEAAAILRKMGDR 179
+ + F++ F+E+ ++ +T Y L + E + + +M +
Sbjct: 450 LCK----GGKFDVACTFLEKM-VSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQK 504
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
P + + + L + I + G P TY + A GR E
Sbjct: 505 DVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEA 564
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF------ 293
+ + + K ++ + +YN +ID + D A I + M PN TF
Sbjct: 565 ENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRH 624
Query: 294 -------------NTLISGHCKDAEVHKTRELL------------VMLLECGF------- 321
T + + A+V + EL+ + +LE GF
Sbjct: 625 LLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILE-GFSEERRLD 683
Query: 322 ---------KPDKFTFN-----SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
K D N S+++C C+ + DA L M+ G PN I+Y L+
Sbjct: 684 EVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLL 743
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
A G R+ +F+ ++ + D + +I R + + + +
Sbjct: 744 SGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCK 803
Query: 428 PDNFSYSALIKAL 440
P + +Y+ L + L
Sbjct: 804 PSDETYAMLTEEL 816
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 132/284 (46%), Gaps = 4/284 (1%)
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
P +TY L+ AL + RYL+ + + + ++N +I +C+ +D A ++
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
+M R + + V++ LI G C+ V + EL L + PD +T +++ LC
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCD 242
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
A R E+ L L +M E G P T Y L+ C + ++ +M + + P T
Sbjct: 243 ARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVT 302
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
A++ ++CR ++ A + F SM G P+ ++Y+A+++ G+ +A M
Sbjct: 303 CTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMR 362
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ G PD T NL++ G E A +++ + G++ +
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQY 406
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 156/386 (40%), Gaps = 16/386 (4%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ + GI P++ +N VI+ L K D+A ++M C PD +TY+ I +C+
Sbjct: 431 LEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKG 490
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
E L + +M P+ YTI+ID + R+ M P+ T +
Sbjct: 491 SREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTT 550
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
V H+A +++ + + + NTL+ ++ A IL+ M
Sbjct: 551 SVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVA 610
Query: 181 YLPESSTF----------------DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYL 224
+P TF T + ++L + + + K V YL
Sbjct: 611 SMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYL 670
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
++E + R E ++H+ +D L N + Y +++CFCK+ M A + M
Sbjct: 671 AILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGH 730
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
PNL+++ L+SG + + + +E+ L + D+ + +ID L R +
Sbjct: 731 GFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMC 790
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSL 370
D +S + + P+ TY +L L
Sbjct: 791 HDMISILEQMKCKPSDETYAMLTEEL 816
>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 120/494 (24%), Positives = 227/494 (45%), Gaps = 9/494 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKP-DRFTYNILIHGICRIGVVDE 63
G+ P+ Y + L + + A+ F QM + P + + +N +IHG C G V +
Sbjct: 243 GVRPNAATYATYLYGLCHAKQVKSAW-NFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHK 301
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ + M+ G+ P+V++Y+IL+DG C V + +L M + PN + SL+H
Sbjct: 302 AIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLH 361
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R AFEL R ++ +V + +L+ + + M ++P
Sbjct: 362 GLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVP 421
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ + + L E + + + G+ P T +L+ G E +L
Sbjct: 422 DAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFL 481
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ V + +V ++ +Y ++I CKVN + I +M R P+ V ++ +I G K
Sbjct: 482 DKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKA 541
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + L +++ G KP+ FT+ S+I+ LC + + + M+ G+ P+ I Y
Sbjct: 542 LDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILY 601
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI C ++ +L +F++M+ + +S D + + LI F ++ ++ A+ M+
Sbjct: 602 TSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMN 661
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL P +Y+ LI K G +A + SM Q G PD+ S ++ G +
Sbjct: 662 KGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPDAKLSCIL-------GLGND 714
Query: 484 AHDIVKTSKERGIS 497
HD + +E+ +S
Sbjct: 715 GHDFGDSQEEKDVS 728
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/441 (20%), Positives = 193/441 (43%), Gaps = 4/441 (0%)
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE--RNVCPNEATVRSL 121
A L M+ G +PNVY+Y++L+ + + ++ + + + V PN AT +
Sbjct: 195 ARSLFDDMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATY 254
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++G+ A+ L +R N +++ ++ +A + M G+
Sbjct: 255 LYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGF 314
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P+ ++ V L D+ +L + G+ P +Y L+ L +AGR VE
Sbjct: 315 VPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGR-VELAF 373
Query: 242 YLNHVFKDRLVSNVN-SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L KD+ + + Y++V+ C+ ++ ++ +M + P+ +++LI +
Sbjct: 374 ELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAY 433
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ ++ + E+ +++ G P+ T ++ +A L ++ ++GV P+
Sbjct: 434 CRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSL 493
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
TY ++I LC + +F M PD ++ +I F + +++A + ++
Sbjct: 494 CTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYK 553
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ G +P+ F+Y++LI L + E F M G PD ++ ++
Sbjct: 554 MVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSN 613
Query: 481 FEEAHDIVKTSKERGISFKSF 501
+ A +I + + G+S SF
Sbjct: 614 MKAALEIFREMETEGLSADSF 634
>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 228/494 (46%), Gaps = 9/494 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKP-DRFTYNILIHGICRIGVVDE 63
G+ P+ Y + L ++ + A+ F QM + P + + +N +IHG C G V +
Sbjct: 243 GVRPNAATYGTYLYGLCRAKQVKSAW-NFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHK 301
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ + M+ G+ P+V++Y+IL+DG C V + +L M + PN + SL+H
Sbjct: 302 AVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLH 361
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R AFEL R ++ +V + +L+ + + M ++P
Sbjct: 362 GLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVP 421
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ + + L E + + I G+ P T +L+ G E +L
Sbjct: 422 DAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFL 481
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ V + +V N+ +Y ++I+ CKVN + I +M R P+ V ++ +I G K
Sbjct: 482 DKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKA 541
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + L +++ G KP+ FT+ S+I+ LC + + + M+ G+ P+ I Y
Sbjct: 542 LDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILY 601
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI C ++ +L +F++M+ + +S D + + LI F ++ ++ A+ M+
Sbjct: 602 TSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMN 661
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL P +Y+ LI K G +A + SM Q G PD+ S ++ G +
Sbjct: 662 KGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPDAKLSCIL-------GLGND 714
Query: 484 AHDIVKTSKERGIS 497
D + +E+ +S
Sbjct: 715 GDDFADSQEEKDVS 728
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/451 (20%), Positives = 188/451 (41%), Gaps = 37/451 (8%)
Query: 49 NILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVA--EVFRVLEIM 106
N L+ G+ + L M+ G +PN+Y+Y++L+ + + ++ E +L M
Sbjct: 180 NFLLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEM 239
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
+ V PN AT T LY L
Sbjct: 240 EVEGVRPNAATY-----------------------------------GTYLYGLCRAKQV 264
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
A L+ + RGY S F+ + +++ + D K G P +Y +L
Sbjct: 265 KSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSIL 324
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ L K G + G L + ++ + N+ SY+ ++ C+ ++ A E+ + ++D+
Sbjct: 325 VDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGF 384
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
+ + ++ ++ G C+ ++ +L ++ F PD + ++S+I CR + ++AL+
Sbjct: 385 KHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALE 444
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
M+ G+ PN +T IL+ G + + K++ + P++ T+ +I C
Sbjct: 445 VFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLC 504
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
++NK F M+ G PD YS +I +K+ EA + + M G P+ +
Sbjct: 505 KVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIF 564
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T ++ L + E + K G++
Sbjct: 565 TYTSLINGLCHDDKLPEVMTLFKHMIGEGLT 595
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 136/528 (25%), Positives = 231/528 (43%), Gaps = 36/528 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI YN +ID L K AYL ++M PD +YN LIHG G ++ A
Sbjct: 294 GIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLA 353
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + QM P+V TYT LIDG+C R E RVL M+ V P+E T +L++G
Sbjct: 354 IYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNG 413
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A +L+ R + + L+ S+A IL+ M G P+
Sbjct: 414 YCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPD 473
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + + ++ET IL K GV P Y L+ KAG E +Y
Sbjct: 474 VITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFV 533
Query: 245 HVFKDRLVSN-----------------------------------VNSYNMVIDCFCKVN 269
+++ LV+N V S+N +ID +C+
Sbjct: 534 DIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRG 593
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+ A + M P++ T+ +L+ G C+ + + +E +V LLE D+ T N
Sbjct: 594 NVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLN 653
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+++ +C+ ++ALD +MV + P+T TY IL+ C G V +L L Q M
Sbjct: 654 TLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEK 713
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSML-TLGLRPDNFSYSALIKALIKSGRFDE 448
+ PD + L+ +++ A F ++ GL D +Y++++ +K G+ +E
Sbjct: 714 GLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINE 773
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++ +M +N P S + N+++ +++G+ + + + GI
Sbjct: 774 IERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGI 821
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/520 (25%), Positives = 240/520 (46%), Gaps = 75/520 (14%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKP-DRFTYNILIHGICRIGVVDE--------- 63
N +++ALV N + +L F + S+D+ P D T NI+++ +C G + +
Sbjct: 199 NNILNALVGINKSEYVWL-FLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMK 257
Query: 64 -------------------------ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE 98
ALR++ ME G ++YTY I+ID C KR A
Sbjct: 258 NCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSAR 317
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LL 157
+ +L+ M+E N+ P+E + +L+HG F + A + + M R+ L + T L+
Sbjct: 318 AYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQ-MLRQSLKPSVATYTALI 376
Query: 158 YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK 217
N EA +L +M G P T+ +L+ + K
Sbjct: 377 DGYCRNGRTDEARRVLYEMQITGVRPSELTYS----------------ALLNGYCKHS-- 418
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATE 276
K G ++ +YL + R +S N Y ++ID FC++ + +A +
Sbjct: 419 --------------KLGPALDLIKYL----RSRSISINRTMYTILIDGFCQLGEVSKAKQ 460
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
I + M I P+++T++ LI+G CK +H+T+E+L + + G P+ + +++ C
Sbjct: 461 ILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFC 520
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
+A ++AL ++ G+ N++ +N L+ S G +A + + Q M +IS D+
Sbjct: 521 KAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVA 580
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
+FN +I S+C+ + +A + +M+ G PD +Y +L++ L + G +AK+ + +
Sbjct: 581 SFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYL 640
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ C D T N +L + + G +EA D+ + R I
Sbjct: 641 LEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNI 680
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/505 (23%), Positives = 231/505 (45%), Gaps = 34/505 (6%)
Query: 22 KSNSIDLAY----LKFQQMSVDQCKPDRFT--YNILIHGICRIGVVDEALRLVKQMEGLG 75
KS +D A+ L+ V Q DR T Y + +H + + + +A+ +++ + G
Sbjct: 79 KSGKLDKAHGKLALRMLDSIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTG 138
Query: 76 YA-----------------PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
++ N+++ +L++ + +V + + M E C +A++
Sbjct: 139 FSCSAIFSSLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDE---CGFKASL 195
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL-----VCNTLLYRLSNNSMASEAAAIL 173
S + + L E + F+ +E L +K CN +L L S+A ++L
Sbjct: 196 FS-CNNILNALVGINKSEYVWLFL-KESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESML 253
Query: 174 RKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
+KM + LP + T++ + V ILD K G++ TY ++++ L K
Sbjct: 254 QKMKN-CRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKL 312
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
R L + + L + SYN +I F ++ A I +M + + P++ T+
Sbjct: 313 KRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATY 372
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
LI G+C++ + R +L + G +P + T++++++ C+ + ALD + +
Sbjct: 373 TALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRS 432
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
+ N Y ILI C +G+V+++ ++ + M AD I PD+ T++ALI C+M I +
Sbjct: 433 RSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHE 492
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
++ M G+ P+N Y+ L+ K+G EA + F+ + ++G +S N +L
Sbjct: 493 TKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLC 552
Query: 474 TLVQQGRFEEAHDIVKTSKERGISF 498
+ ++G EA + ISF
Sbjct: 553 SFYREGMIAEAEQFKQYMSRMKISF 577
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/516 (23%), Positives = 235/516 (45%), Gaps = 31/516 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ LY ++ K+ A F + + +N L+ R G++ EA
Sbjct: 504 GVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEA 563
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + M + + +V ++ +ID +C V E F V + M P+ T SL+ G
Sbjct: 564 EQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRG 623
Query: 125 VFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ C H +A E ++ +E+ + NTLL + + EA + KM R L
Sbjct: 624 L--CQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNIL 681
Query: 183 PESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
P++ YT T L+ G + +L +++G+ P Y L+ L G+ V+
Sbjct: 682 PDT----YTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQ-VK 736
Query: 239 GDRYLNH--VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
Y+ + K+ L ++ +YN +++ + K ++ + R M + ++ P+ ++N L
Sbjct: 737 AASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNIL 796
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ G+ K ++ +T L +++ G KPD T+ +I LC E A+ L +MV GV
Sbjct: 797 MHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGV 856
Query: 357 PPNTITYNILIRSLCA----------------IGDVARSLRLFQKMQADRISPDIYTFNA 400
P+ + ++ILI++ +GD+ + L + M+A + P ++
Sbjct: 857 FPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESS 916
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
+++ C+ K+E+A F S++ G+ P +++ L+ L K + D+A ME G
Sbjct: 917 IVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCG 976
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
D T N+++ L + +A D+ + K +G+
Sbjct: 977 LKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGL 1012
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 199/441 (45%), Gaps = 17/441 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y +++ L + + A + C D T N L+ GIC+ G +DEA
Sbjct: 609 GWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEA 668
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L ++M P+ YTYTIL+DGFC +V +L++M E+ + P+ L++G
Sbjct: 669 LDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNG 728
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ A + + +E L + N+++ +E ++R M + P
Sbjct: 729 LVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYP 788
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
S++++ + + L+ T + +K G+KP TY LL+ L + G ++L
Sbjct: 789 SSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFL 848
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMM----------------DRATEICREMRDRDIA 287
+ + + + +++++I F + + M D A E+ +M+ +
Sbjct: 849 EKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVV 908
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
P+ V ++++ G CK +V + + ++ G P TF +++ LC+ + +DA
Sbjct: 909 PSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHL 968
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
M G+ + +TYN+LI LC + +L L+++M++ + P+I T+ L +
Sbjct: 969 KQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYA 1028
Query: 408 MNKIEKAEKAFFSMLTLGLRP 428
++ EK + G+ P
Sbjct: 1029 TGTMQDGEKLLKDIEDRGIVP 1049
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 117/515 (22%), Positives = 223/515 (43%), Gaps = 29/515 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ ++ ++NA++ + + I A Q MS + D ++N +I C+ G V EA
Sbjct: 539 GLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEA 598
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M G+ P++ TY L+ G C + + + + E+ +E T+ +L+ G
Sbjct: 599 FSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVG 658
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A +L + + R L LL A +L+ M ++G +P+
Sbjct: 659 ICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPD 718
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFI------KRGVKPRFSTYLLLMEALYKAGRDVE 238
+ + TCL+ GL +NE +++ K G+ Y +M K G+ E
Sbjct: 719 TIAY----TCLLNGL-VNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINE 773
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+R + ++ ++ + + SYN+++ + K + R + R+M I P+ VT+ LI
Sbjct: 774 IERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIF 833
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW---- 354
G C+ + + L ++ G PD F+ +I + +AL S M +W
Sbjct: 834 GLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYM-KWVGDI 892
Query: 355 -------------GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
GV P+ + + ++R LC G V ++ +F + + P I TF L
Sbjct: 893 DGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTL 952
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
+ C+ KI+ A M + GL+ D +Y+ LI L +A + M+ G
Sbjct: 953 MHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGL 1012
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
P+ T + + G ++ ++K ++RGI
Sbjct: 1013 LPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGI 1047
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ PS ++++ L K ++ A + F + P T+ L+HG+C+ +D+
Sbjct: 905 LGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDD 964
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L + ME G +V TY +LI G CN K + + + E MK + + PN T +L
Sbjct: 965 AFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTG 1024
Query: 124 GVF 126
++
Sbjct: 1025 AMY 1027
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 226/488 (46%), Gaps = 29/488 (5%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N ++ AL K + +++M + P+ FT NILI+ +C + V E L + +
Sbjct: 94 FNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIM 153
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
GY P+V TYT LI G C R++E R+ M++ PN T +L+ G+ R + +
Sbjct: 154 RRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNIN 213
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A +L Q+++ T Y ++ I+ ++ G E+
Sbjct: 214 LALKL----------HQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKR----- 258
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+ + + +GV+P T+ L++ L K G +E ++L + +V
Sbjct: 259 --------------LFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIV 304
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
++ ++ +I+ FC V +D A E+ M + P+++++ LI G+CK V + +L
Sbjct: 305 PDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKL 364
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+L G PD TF ++ L A + DA + VP N ++ + LC
Sbjct: 365 YNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCK 424
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G + ++ LF ++++ + DI +FN LI C+ K+E A + F + GL+PD +
Sbjct: 425 NGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVT 484
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y +I K+G+ D A F ME+NGC P+ T + +L + + EE ++
Sbjct: 485 YCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMI 544
Query: 493 ERGISFKS 500
++ +S +
Sbjct: 545 QKDVSLAA 552
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 130/255 (50%), Gaps = 6/255 (2%)
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
F D ++ ++ S+N+++ K+ + + ++M ++PN T N LI+ C V
Sbjct: 83 FFDLMMRSIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRV 142
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ + ++ G+ PD T+ S+I LC HR +A M + G PN +TY L
Sbjct: 143 REGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTL 202
Query: 367 IRSLCAIGDVARSLRLFQKM------QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
I+ LC G++ +L+L Q+M A P+I+++N +I C++ K ++A++ F
Sbjct: 203 IKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNE 262
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ G+RPD ++SALI L K G EAK+ +M G PD +T ++E G
Sbjct: 263 MVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGD 322
Query: 481 FEEAHDIVKTSKERG 495
+ A ++ + +G
Sbjct: 323 LDSAKELFLSMPSKG 337
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 179/401 (44%), Gaps = 8/401 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y ++I L + I A F +M C P+ TY LI G+CR G ++ A
Sbjct: 156 GYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLA 215
Query: 65 LRLVKQM------EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
L+L ++M + PN+++Y I+ID C + E R+ M ++ V P+ T
Sbjct: 216 LKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTF 275
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
+L+ + + +A + L M R + +L+ A + M
Sbjct: 276 SALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPS 335
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+GY P+ ++ + ++ E + + ++ G P T+ +L++ L+ AG+ +
Sbjct: 336 KGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGD 395
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ V + N+ ++ +D CK + A E+ E++ ++ ++ +FN LI
Sbjct: 396 AKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLID 455
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G CK ++ EL L + G +PD T+ MI+ C+ + ++A M E G P
Sbjct: 456 GLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTP 515
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKM-QAD-RISPDIYT 397
N +TY+ L+ + ++L KM Q D ++ IYT
Sbjct: 516 NLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYT 556
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 147/359 (40%), Gaps = 35/359 (9%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ YN +ID L K A F +M +PD T++ LI +C+ G+V EA +
Sbjct: 235 PNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKF 294
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ M G P+++T+T LI+GFC + + M + P+ + L++G +
Sbjct: 295 LETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCK 354
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ EA + +M G P+ T
Sbjct: 355 TFN-----------------------------------VEEAMKLYNEMLRVGKWPDMKT 379
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
F + L + + + V + ++ L K G E N +
Sbjct: 380 FCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELK 439
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ ++ S+N +ID CK ++ A E+ ++ + P++VT+ +I+G CK+ +V
Sbjct: 440 SYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVD 499
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
L M+ E G P+ T+++++ + ++ E+ + L +M++ V Y I+
Sbjct: 500 NANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIV 558
>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
Length = 846
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 229/508 (45%), Gaps = 34/508 (6%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
GI P+ YN +I A+ F++M C+P TYNIL+ +C G + E
Sbjct: 248 FGIVPNVCSYNILIKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPE 307
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A RL +M +G N T+ +LIDG+ R+ + MK R + P+ T +
Sbjct: 308 ARRLFDEMAQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAA 367
Query: 124 GVFR------------------------------CLDPH--KAFELLIRFMEREPLTQKL 151
G ++ C D A+ELL +E+
Sbjct: 368 GAYKFGHAAQLVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVT 427
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
N L+ S + EA + R M G P SSTF+Y + L L+E +L+
Sbjct: 428 GFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHM 487
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+ +G +++ + ++A ++ G V + + + K L + +++ I+ C+++ +
Sbjct: 488 VSKGYCLS-TSFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYV 546
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
+ A + EM R I PN T+N++IS C+ + + +L + + G PD +T N +
Sbjct: 547 NEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNIL 606
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
ID LCR + E + L +M G+ P+T+TYN +I + C D+ ++ KM A
Sbjct: 607 IDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGC 666
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
PDI+T+N + S C + + +A K ++ +G PD+ +Y+ L+ I S D A
Sbjct: 667 EPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDG-ICSDVLDRAMI 725
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQG 479
+ + P++ T N+ L +QG
Sbjct: 726 LTGRLIKMAFQPNTITLNVFLSHFCKQG 753
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/518 (25%), Positives = 213/518 (41%), Gaps = 37/518 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +PS A++ L +S + A+ F++M+ +P T+N +I G C G+V A
Sbjct: 179 GKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAARGPRPSLATFNAMILGFCHRGLVRVA 238
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G PNV +Y ILI G C + F++ E M P T LV
Sbjct: 239 SGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDV 298
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A L + + N L+ + +A A R+M RG +P+
Sbjct: 299 LCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPD 358
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S TF+ ++ G +L+ L R + L
Sbjct: 359 SCTFNIIA---AGAYKFGHAAQLVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLR 415
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +V +N +I + K + + A E+ R M +AP+ TFN LI G C
Sbjct: 416 GAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQG 475
Query: 305 EVHKTRELL---------------------------VMLLEC-------GFKPDKFTFNS 330
+ + + LL V L+C G +PD F++
Sbjct: 476 RLDEAQLLLEHMVSKGYCLSTSFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSA 535
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
I+ LCR +A +EM G+ PN TYN +I +LC G++ +L+L Q M+ +
Sbjct: 536 YINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNG 595
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ PDIYT N LI CR K+E + M + GL PD +Y+ +I A ++ + A
Sbjct: 596 LVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAM 655
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
M GC PD +T N+ + +L +A ++
Sbjct: 656 NFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVL 693
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 207/451 (45%), Gaps = 24/451 (5%)
Query: 57 RIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEA 116
R G V A + ++M G P++ T+ +I GFC+ V +L IM E + PN
Sbjct: 196 RSGEVHAAWNVFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVC 255
Query: 117 TVRSLVHGVFRCL-----DPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAA 170
+ L+ G C+ D K FE M R +V N L+ L + EA
Sbjct: 256 SYNILIKG--HCVFGWSRDAFKLFEE----MHRSGCEPTVVTYNILVDVLCHEGRMPEAR 309
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
+ +M G + TF+ + +++ C RG+ P T+ ++
Sbjct: 310 RLFDEMAQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGA 369
Query: 231 YKAGRDVE----GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
YK G + D + +H+ D + +M++ C +D A E+ R ++
Sbjct: 370 YKFGHAAQLVHDHDMFGSHMLADGM-------DMLVCRLCWDCRLDDAWELLRGAIEQGA 422
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
++ FN LI+ + K+ + EL ++ + G P TFN +I LC R ++A
Sbjct: 423 PLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQL 482
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L MV G +T ++ I + + G+ +L+ + M + PD F+A I C
Sbjct: 483 LLEHMVSKGYCLST-SFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLC 541
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R++ + +A +AF M G+ P+NF+Y+++I AL ++G EA + +M QNG PD Y
Sbjct: 542 RLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIY 601
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
TSN++++ L ++G+ E +++ G++
Sbjct: 602 TSNILIDGLCREGKLEMVDNLLLDMCSNGLT 632
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 1/228 (0%)
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
+ + F M A ++ +R P+L L+ + EVH + +
Sbjct: 154 LALHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAAR 213
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G +P TFN+MI C A L M E+G+ PN +YNILI+ C G +
Sbjct: 214 GPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDA 273
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+LF++M P + T+N L+ C ++ +A + F M +G++ + +++ LI
Sbjct: 274 FKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDG 333
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE-AHD 486
K+GR D+A + M+ G PDS T N+I + G + HD
Sbjct: 334 YAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHD 381
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 124/279 (44%), Gaps = 3/279 (1%)
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
+ R+ L + A AG E L V + ++++ ++ + + A
Sbjct: 146 RARYGALRLALHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWN 205
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
+ EM R P+L TFN +I G C V LL ++ E G P+ ++N +I C
Sbjct: 206 VFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHC 265
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
DA EM G P +TYNIL+ LC G + + RLF +M I +
Sbjct: 266 VFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTI 325
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
TFN LI + + ++++A A+ M GL PD+ +++ + K F A Q
Sbjct: 326 TFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYK---FGHAAQLVHDH 382
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ G + + ++++ L R ++A ++++ + E+G
Sbjct: 383 DMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQG 421
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%)
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+ALD L+ + G P+ L+R L G+V + +F++M A P + TFNA+I
Sbjct: 167 EALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAARGPRPSLATFNAMI 226
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
FC + A M G+ P+ SY+ LIK G +A + F M ++GC
Sbjct: 227 LGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDAFKLFEEMHRSGCE 286
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
P T N++++ L +GR EA + + GI
Sbjct: 287 PTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGI 320
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 212/467 (45%), Gaps = 36/467 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P + +N ++ L+KSN + A+ F + + K D +++ I+I G C +G +D+
Sbjct: 112 GLVPGSNTFNNLLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKG 170
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ QME +G +PNV YT LIDG C + ++ M E +V N+ T L++G
Sbjct: 171 FEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLING 230
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ + + + KM G +P
Sbjct: 231 FFKM-----------------------------------GLKKDGIELYEKMKLTGIVPN 255
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + LN + D +RGV TY L+ L + R +E +R +
Sbjct: 256 VYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMC 315
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +D L N+ SYN +ID +C + +D+A+ + +M+ +P+L T+N LI+G +
Sbjct: 316 RMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAK 375
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+++ + G P K T+ ++D L R+ E A S M + G+ + Y
Sbjct: 376 NSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYG 435
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI LC +GD+ + +LF+ + + P+ +N +I +C+ +A + M
Sbjct: 436 VLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGEN 495
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
G+ P+ SY++ I L K ++ EA+ M + G P N+I
Sbjct: 496 GMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 542
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 196/371 (52%), Gaps = 10/371 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP+ +Y +ID K+ I+ F +M +++TY +LI+G ++G+ +
Sbjct: 180 MGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKD 239
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ L ++M+ G PNVYTY +I CN ++ F + + M+ER V N T +L+
Sbjct: 240 GIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIG 299
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + +A L+ R M+R+ L+ L+ NTL+ + +A+++ +M G
Sbjct: 300 GLCQERRVLEAERLMCR-MKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQS 358
Query: 183 PESSTFDYTVTCLVTGL-DLNETCGILDTFIK---RGVKPRFSTYLLLMEALYKAGRDVE 238
P +T++ L+ G + + G+ D + RG+ P TY +LM+AL ++ +
Sbjct: 359 PSLATYN----ILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEK 414
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + K LV+++ Y ++I C V M A+++ + + + + PN V +NT+I
Sbjct: 415 AFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIY 474
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G+CK+ ++ LL + E G P+ ++NS I LC+ ++ +A L +M+E G+ P
Sbjct: 475 GYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKP 534
Query: 359 NTITYNILIRS 369
+ +N++ ++
Sbjct: 535 SISIWNMISKA 545
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 194/462 (41%), Gaps = 41/462 (8%)
Query: 40 QCKPDRFTYNILIH-----GICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAK 94
Q D F ++LIH R + ++AL QM G G P T+ L+ +
Sbjct: 72 QPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSN 131
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCN 154
+ +RV K NV + + ++ G K FE+L + E +V
Sbjct: 132 FFEKAWRVFNETK-GNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYT 190
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
TL+ N + KMG+ + YT T L+ G F K
Sbjct: 191 TLIDGCCKNGDIERGKQLFYKMGELDVVAN----QYTYTVLING------------FFKM 234
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G+K + L E + G +V NV +YN +I C ++ A
Sbjct: 235 GLK---KDGIELYEKMKLTG----------------IVPNVYTYNSMICRCCNDGKLNNA 275
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
E+ EMR+R +A N+VT+NTLI G C++ V + L+ + G P+ ++N++ID
Sbjct: 276 FELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDG 335
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
C + A ++M G P+ TYNILI + A + ++M+A +SP
Sbjct: 336 YCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPS 395
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
T+ L+ + R + IEKA + + SM GL D + Y LI L G EA + F
Sbjct: 396 KVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFK 455
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
S+++ P+ N ++ ++G A ++K E G+
Sbjct: 456 SLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGM 497
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 145/289 (50%), Gaps = 1/289 (0%)
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ I RG+ P +T+ L+ L K+ + R N K + +V S+ ++I C+V
Sbjct: 106 NQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNET-KGNVKLDVYSFGIMIKGCCEV 164
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+D+ E+ +M + ++PN+V + TLI G CK+ ++ + ++L + E +++T+
Sbjct: 165 GYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTY 224
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+I+ + +D ++ +M G+ PN TYN +I C G + + LF +M+
Sbjct: 225 TVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRE 284
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
++ ++ T+N LI C+ ++ +AE+ M GL P+ SY+ LI G D+
Sbjct: 285 RGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDK 344
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
A F M+ +G +P T N+++ + D+V+ + RG+S
Sbjct: 345 ASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLS 393
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 136/581 (23%), Positives = 246/581 (42%), Gaps = 89/581 (15%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMS-----VDQ----------CK------ 42
G P+ YNA++ ++++ +D A L ++MS +D+ CK
Sbjct: 235 FGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWRE 294
Query: 43 -----------PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFC 91
P+ YN +I G+C +EA+ + +M PNV TY IL+ G
Sbjct: 295 ALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCL 354
Query: 92 NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE------ 145
N K++ R+L +M P+ SLVH + D A++LL + + E
Sbjct: 355 NKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYV 414
Query: 146 -----------------PLT---------QKLVCNTLLYRLSNNSMA---------SEAA 170
P+T + L T+L +++ S A +A
Sbjct: 415 VYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAY 474
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
++ +M G++P++ST+ + L + + GV P TY +L++
Sbjct: 475 KVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCF 534
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
KAG + +L+ + +D V +Y +I + K + A E+ M + PN+
Sbjct: 535 SKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNV 594
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLL----------------ECGFKPDKFTFNSMIDC 334
+T+ LI G+CK + K ++ + KP+ T+ +++D
Sbjct: 595 ITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDG 654
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LC+AH+ +DA D L M G PNTI Y+ LI C + + +F KM +P+
Sbjct: 655 LCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPN 714
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+YT+++LI + +++ K ML P+ Y+ +I L K + DEA + L
Sbjct: 715 VYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLML 774
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
ME+ GC P+ T +++ + G+ ++ ++ + +G
Sbjct: 775 MMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKG 815
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 126/509 (24%), Positives = 221/509 (43%), Gaps = 24/509 (4%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ + Y ++ + + M + C P +N L+H C+ A +L
Sbjct: 341 PNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKL 400
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV-- 125
+K+ME P Y ILI C+ + K N + TV + V+ V
Sbjct: 401 LKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSF 460
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-----LSNNSMASEAAAILRKMGDRG 180
RCL FE + + E + V +T Y L N S A + ++M G
Sbjct: 461 ARCLCGFGKFEKAYKVI-HEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTG 519
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P+ T+ + C + + LD ++ G +P TY L+ A KA + +
Sbjct: 520 VVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVAN 579
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR-DRDIA------------ 287
+ NV +Y +ID +CK +++A +I MR D DI
Sbjct: 580 ELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNV 639
Query: 288 ---PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
PN+VT+ L+ G CK +V R+LL + G +P+ ++++ID C+A + ++A
Sbjct: 640 AEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEA 699
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
+ +MVE G PN TY+ LI L + L++ KM + +P+I + +I
Sbjct: 700 QEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDG 759
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
++ K ++A K M G +P+ +Y+A+I K+G+ D+ + F M GC P+
Sbjct: 760 LSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPN 819
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKE 493
T +++ G +EA+ +++ K+
Sbjct: 820 FVTYTVLINHCCATGHLDEAYALLEEMKQ 848
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/515 (23%), Positives = 222/515 (43%), Gaps = 54/515 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T Y+ VI L ++ ++ A+ F++M PD +TY ILI + G++ +A
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQA 543
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G P V TYT LI + AK+V+ + E+M + PN T +L+ G
Sbjct: 544 HNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDG 603
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + KA ++ R + + +++ NN P
Sbjct: 604 YCKSGNIEKACQIYARMRGDADIPDV----DMYFKIKNNVAEK---------------PN 644
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ V L + + +L+T G +P Y L++ KA + E +
Sbjct: 645 VVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFH 704
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + NV +Y+ +ID K +D ++ +M + APN+V + +I G K A
Sbjct: 705 KMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVA 764
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + +L++M+ E G KP+ T+ +MID +A + + L+ EM G PN +TY
Sbjct: 765 KTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYT 824
Query: 365 ILIRSLCAIGDVAR---------------------------------SLRLFQKMQADRI 391
+LI CA G + SL L ++++ +
Sbjct: 825 VLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGS 884
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT--LGLRPDNFSYSALIKALIKSGRFDEA 449
+P I + LI +F + ++E A + +++ + + Y++LI + + + A
Sbjct: 885 APIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHA 944
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ F M ++G PD T +L L++ R+EEA
Sbjct: 945 FELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEA 979
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 135/578 (23%), Positives = 231/578 (39%), Gaps = 97/578 (16%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILI------------------ 52
+L N +I ++ ++A + ++ KP R TYN L+
Sbjct: 207 KLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHRE 266
Query: 53 -----------------HGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR 95
+C++G EAL L+++ + + PN Y +I G C A
Sbjct: 267 MSELGLSMDEFTLGFFAQALCKVGKWREALSLIEKED---FVPNTILYNKMISGLCEASF 323
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT 155
E L M+ + PN T R L+ G + +L + + N+
Sbjct: 324 FEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNS 383
Query: 156 LLYRLSNNSMASEAAAILRKMG-------------------DRGYLPESSTFDYTVTC-- 194
L++ + S A +L+KM G LP TF+
Sbjct: 384 LVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYN 443
Query: 195 --LVTGLDLNET---------CG---------ILDTFIKRGVKPRFSTYLLLMEALYKAG 234
L G LN+ CG ++ + G P STY ++ L A
Sbjct: 444 EMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNAS 503
Query: 235 RDVEGDRYLNHVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
R VE +L K +V +V +Y ++IDCF K ++ +A EM P +VT+
Sbjct: 504 R-VENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTY 562
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM-V 352
TLI + K +V EL +++ G P+ T+ ++ID C++ E A + M
Sbjct: 563 TTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRG 622
Query: 353 EWGVP---------------PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
+ +P PN +TY L+ LC V + L + M D P+
Sbjct: 623 DADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIV 682
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
++ALI FC+ K+++A++ F M+ G P+ ++YS+LI L K R D + M
Sbjct: 683 YDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKML 742
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+N C P+ +++ L + + +EA+ ++ +E+G
Sbjct: 743 ENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKG 780
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 158/354 (44%), Gaps = 11/354 (3%)
Query: 139 IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTG 198
IR ++E L + L N L+ + N + + A L ++ D GY P T++ V +
Sbjct: 197 IRGDDKEVLGKLL--NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRA 254
Query: 199 LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY 258
L+ + + G+ T +AL K G+ E L+ + K+ V N Y
Sbjct: 255 DKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREA---LSLIEKEDFVPNTILY 311
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
N +I C+ + + A + MR PN+ T+ L+ G ++ + + +L M++
Sbjct: 312 NKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIA 371
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
G P FNS++ C++ F A L +M + P + YNILI S+C+ G++
Sbjct: 372 EGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPG 431
Query: 379 --SLRLFQKMQADRISPDIYTFNALIQSF----CRMNKIEKAEKAFFSMLTLGLRPDNFS 432
+ L +K + +S + SF C K EKA K M+ G PD +
Sbjct: 432 PVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTST 491
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
YS +I L + R + A F M+ G PD YT ++++ + G ++AH+
Sbjct: 492 YSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHN 545
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 160/354 (45%), Gaps = 10/354 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y A++D L K++ + A + M VD C+P+ Y+ LI G C+ +DEA +
Sbjct: 643 PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+M GY PNVYTY+ LID KR+ V +VL M E + PN ++ G+ +
Sbjct: 703 FHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 762
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+A++L++ E+ + ++ + + R+MG +G P T
Sbjct: 763 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVT 822
Query: 188 FDYTVT-CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ + C TG L+E +L+ + S+Y ++E + G L V
Sbjct: 823 YTVLINHCCATG-HLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLG--LLEEV 879
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM--RDRDIAPNLVTFNTLISGHCKDA 304
K+ + Y ++ID F K ++ A E+ +E+ +A + +LI +
Sbjct: 880 EKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYAS 939
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL---DCLSEM-VEW 354
++ EL ++ G PD TF ++ L R R+E+AL D L +M + W
Sbjct: 940 KIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDINW 993
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 117/281 (41%), Gaps = 44/281 (15%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+YN ++ F + + +D A + REM + ++ + T CK V K RE L ++
Sbjct: 243 TYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCK---VGKWREALSLI 299
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL---------- 366
+ F P+ +N MI LC A FE+A+D L+ M PN TY IL
Sbjct: 300 EKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQL 359
Query: 367 -------------------------IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+ + C D + + +L +KM+ P +N L
Sbjct: 360 GRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNIL 419
Query: 402 IQSFCRMNKI------EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
I S C ++ E AEKA+ ML+ G + + + + L G+F++A +
Sbjct: 420 IGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHE 479
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M NG PD+ T + ++ L R E A + K K G+
Sbjct: 480 MMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGV 520
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 226/475 (47%), Gaps = 2/475 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ-CKPDRFTYNILIHGICRIGVVDE 63
G++P YN +ID +K A + ++ D P+ T+NI+I G+ + G VD+
Sbjct: 214 GVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDD 273
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L++ ++M+ ++YTY+ LI G C+A V + V + ER + T +++
Sbjct: 274 CLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLG 333
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G RC ++ EL R ME + + N L+ L N EA I R M +GY
Sbjct: 334 GFCRCGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA 392
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ +T+ + L +N+ G++ G Y +++ L K R E +
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ K + N + N +I + + + A+ REM P +V++N LI G CK
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKA 512
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + + +LE G+KPD T++ ++ LCR + + AL+ + ++ G+ + + +
Sbjct: 513 GKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMH 572
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NILI LC++G + ++ + M+ + ++ T+N L++ F ++ +A + M
Sbjct: 573 NILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYK 632
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+GL+PD SY+ ++K L A + F +G P YT N+++ +V +
Sbjct: 633 MGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/516 (23%), Positives = 216/516 (41%), Gaps = 45/516 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P+ R YN +++A V++ F P+ TYN+LI C+ ++
Sbjct: 108 FGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEK 167
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + M G+ P+V++Y+ +I+ A ++ + + + M ER V P+ L+
Sbjct: 168 ARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILID 227
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKL-VCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G + D A EL R +E + + N ++ LS + I +M
Sbjct: 228 GFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQN--- 284
Query: 183 PESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
E YT + L+ GL ++++ + + +R TY ++ + G+ ++
Sbjct: 285 -EREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGK-IK 342
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
L + + + N+ SYN++I + +D AT I R M + A + T+ I
Sbjct: 343 ESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIH 402
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP- 357
G C + V+K ++ + G D + + S+IDCLC+ R E+A + + EM + GV
Sbjct: 403 GLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVEL 462
Query: 358 ----------------------------------PNTITYNILIRSLCAIGDVARSLRLF 383
P ++YNILI LC G +
Sbjct: 463 NSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFV 522
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
++M + PD+ T++ L+ CR KI+ A + + L GL D ++ LI L
Sbjct: 523 KEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSV 582
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
G+ D+A +ME C + T N ++E + G
Sbjct: 583 GKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVG 618
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 190/430 (44%), Gaps = 7/430 (1%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
GYA + Y ++ + V V R++E+++ + +E S++ + P +A
Sbjct: 38 GYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQA 97
Query: 135 FELLIRFMER---EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
++ R E EP + NTLL + ++ G P T++
Sbjct: 98 LDVFKRMREIFGCEPAIRSY--NTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVL 155
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ + + G LD K G KP +Y ++ L KAG+ + + + + +
Sbjct: 156 IKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGV 215
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEIC-REMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+V YN++ID F K A E+ R + D + PN+ T N +ISG K V
Sbjct: 216 APDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCL 275
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
++ + + + D +T++S+I LC A + A +E+ E + +TYN ++
Sbjct: 276 KIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF 335
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C G + SL L++ M+ + S +I ++N LI+ KI++A + M G D
Sbjct: 336 CRCGKIKESLELWRIME-HKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 394
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+Y I L +G ++A +E +G + D Y I++ L ++ R EEA ++VK
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 454
Query: 491 SKERGISFKS 500
+ G+ S
Sbjct: 455 MSKHGVELNS 464
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 241/493 (48%), Gaps = 9/493 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P +++ ++ A+V+ A F Q+ P T ILI+ C + A L
Sbjct: 53 PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSL 112
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ + +G+ PN+ T+ LI+GFC V++ + + +E + SL++G+ +
Sbjct: 113 LGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCK 172
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
A +LL + ME + + L+ +T++ L + + ++A + + RG L +
Sbjct: 173 NGQTRDALQLLQK-MEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVV 231
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
++ + + E +L ++ + P T+ +L++AL K GR VE +
Sbjct: 232 AYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVM 291
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K ++ +YN +++ FC N + A E+ M R + P+++ +N LI+G+CK +
Sbjct: 292 MKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCK---I 348
Query: 307 HKTRELLVMLLECGFK---PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E +V+ E K P+ T+NS+ID LC+ R + + EM + G P+ +TY
Sbjct: 349 DMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTY 408
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI + + C +++ LF+++ I PD Y ++ ++++FC+ K++ AE+A +L
Sbjct: 409 NIFLDAFCKSKPYEKAISLFRQI-VQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLI 467
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G P+ +Y+ +I AL K FDEA M+ N C PD+ T I+ L ++ ++
Sbjct: 468 HGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDK 527
Query: 484 AHDIVKTSKERGI 496
A + ERG+
Sbjct: 528 AEKLRLEMIERGL 540
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 205/459 (44%), Gaps = 34/459 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+PS +I+ + A+ + +P+ T+N LI+G C G+V +A
Sbjct: 85 GITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKA 144
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + GY + ++Y LI+G C + + ++L+ M+E V PN T +++ G
Sbjct: 145 MAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDG 204
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A L R L + N+L++ + EA +L M P+
Sbjct: 205 LCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPD 264
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ V L + E G+ +KRG KP TY LME + E N
Sbjct: 265 DYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFN 324
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K L +V +YN++I+ +CK++M+D A + +E+R +++ PNL T+N+LI G CK
Sbjct: 325 RMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLG 384
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE--W-------- 354
+ +EL+ + + G PD T+N +D C++ +E A+ ++V+ W
Sbjct: 385 RMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFYMYDV 444
Query: 355 ------------------------GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
G PN TY I+I +LC ++ L KM +
Sbjct: 445 IVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDND 504
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
PD TF +I + N+ +KAEK M+ GL D
Sbjct: 505 CPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVND 543
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 215/468 (45%), Gaps = 36/468 (7%)
Query: 22 KSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVY 81
K +++D L F +M P F ++ L+ I R+G A+ L Q+ G P++
Sbjct: 32 KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91
Query: 82 TYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF 141
T TILI+ +C+ ++ F +L + + PN T +L++G C+
Sbjct: 92 TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGF--CI------------ 137
Query: 142 MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
N M S+A A + +GY + ++ + L
Sbjct: 138 ---------------------NGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQT 176
Query: 202 NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
+ +L + V+P TY +++ L K + R + V ++ +V +YN +
Sbjct: 177 RDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSL 236
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
I C V AT + M +I P+ TFN L+ CK+ + + + + ++++ G
Sbjct: 237 IHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGE 296
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
KPD T+N++++ C ++ +A + + MV+ G+ P+ + YN+LI C I V ++
Sbjct: 297 KPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMV 356
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
LF++++ + P++ T+N+LI C++ ++ ++ M G PD +Y+ + A
Sbjct: 357 LFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFC 416
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
KS +++A F + Q G PD Y ++I+E + + + A + ++
Sbjct: 417 KSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQ 463
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 160/358 (44%)
Query: 140 RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL 199
R + + P V + LL + A ++ ++ +G P +T + C
Sbjct: 45 RMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQA 104
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
L+ +L T +K G +P T+ L+ G + + + + SY
Sbjct: 105 HLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYG 164
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
+I+ CK A ++ ++M + + PNL+T++T+I G CKD + L ++
Sbjct: 165 SLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSR 224
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G D +NS+I C ++ +A L+ MV + P+ T+NIL+ +LC G + +
Sbjct: 225 GILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEA 284
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+F M PDI T+NAL++ FC N + +A + F M+ GL PD +Y+ LI
Sbjct: 285 QGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLING 344
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
K DEA F + P+ T N +++ L + GR ++V +RG S
Sbjct: 345 YCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQS 402
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 147/296 (49%)
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
+++T + +++ P + L+ A+ + G + + + ++ + +
Sbjct: 36 VDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTI 95
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
+I+C+C + A + + PN+VTFNTLI+G C + V K + L+ G
Sbjct: 96 LINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKG 155
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
+ D+F++ S+I+ LC+ + DAL L +M E V PN ITY+ +I LC +A +L
Sbjct: 156 YPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADAL 215
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
RLF + + I D+ +N+LI C + + +A + M+ + PD+++++ L+ AL
Sbjct: 216 RLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDAL 275
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
K GR EA+ F M + G PD T N ++E EA ++ +RG+
Sbjct: 276 CKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGL 331
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 148/356 (41%), Gaps = 38/356 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ Y+ VID L K I A F ++ D YN LIHG C +G EA
Sbjct: 191 VRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREAT 250
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
RL+ M P+ YT+ IL+D C R+ E V +M +R P+ T +L+ G
Sbjct: 251 RLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGF 310
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ +A EL R ++R L N L+ M EA + +++ + +P
Sbjct: 311 CLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNL 370
Query: 186 STFDYTV---------TCLVTGLDLNETCG------------ILDTFIK----------- 213
+T++ + +C+ +D E C LD F K
Sbjct: 371 ATYNSLIDGLCKLGRMSCVQELVD--EMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLF 428
Query: 214 ----RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+G+ P F Y +++E K + + L H+ NV +Y ++I+ CK
Sbjct: 429 RQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDC 488
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
D A + +M D D P+ VTF T+I + E K +L + ++E G D+
Sbjct: 489 SFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVNDE 544
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 72/157 (45%)
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
+ H +D L + M+ PP ++ L+ ++ +G ++ LF ++ + I+P I
Sbjct: 32 KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
T LI +C + A ++L +G +P+ +++ LI +G +A L +
Sbjct: 92 TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
G D ++ ++ L + G+ +A +++ +E
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEE 188
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 80/179 (44%), Gaps = 1/179 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ YN++ID L K + +M PD TYNI + C+ ++A+ L
Sbjct: 368 PNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISL 427
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+Q+ G P+ Y Y ++++ FC +++ L+ + CPN T +++ + +
Sbjct: 428 FRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCK 486
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+A LL + + + + T++ L + +A + +M +RG + + +
Sbjct: 487 DCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVNDEA 545
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +Y+ +++ K + +A Q + + C P+ TY I+I+ +C+ DEA
Sbjct: 434 GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEA 493
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ L+ +M+ P+ T+ +I + ++ M ER + +EA LVH
Sbjct: 494 MTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVNDEA---RLVH 549
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 226/488 (46%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ K +D+A F M PD ++YNILIHG+C G + EAL L
Sbjct: 279 PSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDL 338
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
ME G P++ TY IL GF + + +++ M + PN T L+ G +
Sbjct: 339 KNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQ 398
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ +A +L + + LL L + A + +M G P+ T
Sbjct: 399 IGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLIT 458
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + L ++ + + + + P + ++ L + G+ + Y +++
Sbjct: 459 YSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLI 518
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
L ++ YN++ID + K A ++ +++ ++ I+P +VTFN+L+ G C + ++
Sbjct: 519 TSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLS 578
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ R LL + G +P+ T+ ++++ C + L+ LSEM + P ITY ++I
Sbjct: 579 QARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVI 638
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+ LC + S +L + M A ++PD ++N +IQ+FC+ + KA + + ML L
Sbjct: 639 KGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLE 698
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P + +Y+ LI G +A +S++ N + Y I++ +G ++A
Sbjct: 699 PTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVY 758
Query: 488 VKTSKERG 495
+ E+G
Sbjct: 759 FRQMVEKG 766
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/512 (24%), Positives = 237/512 (46%), Gaps = 34/512 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN + I+ A+ Q+M + P+ TY +LI G C+IG V+EA
Sbjct: 346 GLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEA 405
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L K+M G+ ++ + T+L+ C +++V F++ M+ + P+ T +L+HG
Sbjct: 406 LKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHG 465
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + +A + + + +++ N+L++ AIL + ++G + +
Sbjct: 466 LCKQGEVQQAI-----LLYEKMCSNRIIPNSLIH-----------GAILMGLCEKGKISQ 509
Query: 185 SST-FDYTVTCLVTGLDLNETCGILDTFIKRG----------------VKPRFSTYLLLM 227
+ FDY +T ++ LD+ ++D +IKRG + P T+ LM
Sbjct: 510 ARMYFDYLITSNLS-LDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLM 568
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
+ + R L+ + L N +Y +++ +C+ M E+ EM+ + I
Sbjct: 569 YGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIG 628
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
P +T+ +I G CK ++ ++ +LL + G PD+ ++N++I C+A A
Sbjct: 629 PTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQL 688
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
+M+ + P ++TYNILI C GD+ + L +Q +++ + Y + +I++ C
Sbjct: 689 YDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCA 748
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
++KA F M+ G YSA+I L K EAK F M +G PD
Sbjct: 749 KGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDL 808
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
++L Q G +++ + G ++
Sbjct: 809 FEVLLNAFHQCGHLNSEFELLAEMIKSGWLYE 840
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/502 (22%), Positives = 215/502 (42%), Gaps = 2/502 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I G S + V+D L + + A L FQ + +P ++N ++ C++G
Sbjct: 237 IKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGF 296
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD A M G P+ Y+Y ILI G C A + E + M+ + P+ T
Sbjct: 297 VDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNI 356
Query: 121 LVHGVFRCLD-PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
L G FR L + A+ ++ + + + P + L+ EA + ++M
Sbjct: 357 LAKG-FRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISH 415
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G+ + + L ++ + G++P TY L+ L K G +
Sbjct: 416 GFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQA 475
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ +R++ N + ++ C+ + +A + +++ +++ +N +I G
Sbjct: 476 ILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDG 535
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ K + +L L E G P TFNS++ C + A L + G+ PN
Sbjct: 536 YIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPN 595
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+TY L+ C G++ L L +M+A I P T+ +I+ C+ K++++ +
Sbjct: 596 AVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLE 655
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M +GL PD SY+ +I+A K+ +A Q + M + P S T N+++ G
Sbjct: 656 DMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYG 715
Query: 480 RFEEAHDIVKTSKERGISFKSF 501
++A +++ + + R ++ +
Sbjct: 716 DLKDADNLLVSLQNRKVNLNKY 737
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/494 (22%), Positives = 218/494 (44%), Gaps = 30/494 (6%)
Query: 24 NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM---EGLGYAPNV 80
+++D YL + RF+ ++ H + R ++E ++ QM EG G AP++
Sbjct: 108 SAVDFYYLLSNEFGFQH---SRFSRLVVSHVLARKKRLNELRLVLDQMLLHEGSGSAPSL 164
Query: 81 ---------------YTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ +L + + V + VL MK+ N + T SL++ +
Sbjct: 165 CELLLGSFRSWDSSNVVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNL 224
Query: 126 FRCLDPHKAF-ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ E+ + + T +V + L S +A + + + P
Sbjct: 225 RHSNIMWDVYNEIKVSGTPQSEYTSSIVVDGL----CRQSRFQDAVLFFQDTEGKEFQPS 280
Query: 185 SSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+F+ ++ C + +D+ ++ +K G+ P +Y +L+ L AG E
Sbjct: 281 VVSFNTIMSRYCKLGFVDVAKS--FFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDL 338
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
N + L ++ +YN++ F + +++ A I ++M + PNLVT+ LI GHC+
Sbjct: 339 KNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQ 398
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
V + +L ++ GF+ + ++ LC++ + + A EM G+ P+ IT
Sbjct: 399 IGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLIT 458
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y+ LI LC G+V +++ L++KM ++RI P+ A++ C KI +A F ++
Sbjct: 459 YSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLI 518
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
T L D Y+ +I IK G EA + + + + G +P T N ++ +
Sbjct: 519 TSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLS 578
Query: 483 EAHDIVKTSKERGI 496
+A ++ T K G+
Sbjct: 579 QARRLLDTIKLHGL 592
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 102/242 (42%), Gaps = 14/242 (5%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I G+ P+ Y +++ + ++ +M P TY ++I G+C+
Sbjct: 587 IKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWK 646
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ E+ +L++ M+ +G P+ +Y +I FC A+ + + F++ + M N+ P T
Sbjct: 647 LQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNI 706
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L++G D A LL+ R+ K T++ +A R+M ++G
Sbjct: 707 LINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKG 766
Query: 181 YLPESSTFDYTVT-------CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
+ E S DY+ CLVT E + GV P + +L+ A ++
Sbjct: 767 F--EVSIRDYSAVIGRLCKRCLVT-----EAKYFFCMMLSDGVCPDQDLFEVLLNAFHQC 819
Query: 234 GR 235
G
Sbjct: 820 GH 821
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 222/482 (46%), Gaps = 46/482 (9%)
Query: 20 LVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPN 79
L+KS I + Y + + + +PD T I G C G + +AL ++ +G+ +
Sbjct: 239 LLKSFEISIEYTPPKILK-NGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLD 297
Query: 80 VYTYTILIDGFCNAKRVAEVFRVLEIMKERN---VCPNEATVRSLVHGVFRCLDPH--KA 134
+Y LI+G C +V E LE+++ + V P+ +++ G+ C D H A
Sbjct: 298 QVSYGTLINGLC---KVGETKAALELLRRNDGKLVQPDVVMYNTIIDGM--CKDKHVNDA 352
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
F+L + + N L+ +A + KM + +P+ TF V
Sbjct: 353 FDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDG 412
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
++ E +L +K+ +KP TY LM+ + + N + + +N
Sbjct: 413 FCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTAN 472
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
V SYN++I+ FCK+ M+D A ++ +EM + I P+++T+++LI G CK + EL+
Sbjct: 473 VQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVD 532
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
+ G +PD T+NS++D LC+ H + A+ L+++ G+ P+ TY IL++ LC G
Sbjct: 533 EMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSG 592
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
+ + ++F+ + + D+Y + +IQ FC
Sbjct: 593 KLEDARKVFEDLLVKGYNLDVYAYTVMIQGFC---------------------------- 624
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
G FDEA ME+NGC PD+ T +I+ +L ++ + A +++ R
Sbjct: 625 -------DKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMR 677
Query: 495 GI 496
G+
Sbjct: 678 GL 679
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 168/365 (46%), Gaps = 35/365 (9%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P +YN +ID + K ++ A+ + + + PD FTYN LI G C +G + +A+
Sbjct: 329 VQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAI 388
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L +M P+VYT++IL+DGFC + E VL +M ++++ P+ T SL+ G
Sbjct: 389 DLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDG- 447
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
Y L N ++A +I M RG
Sbjct: 448 --------------------------------YCLVNE--VNKAESIFNTMSHRGVTANV 473
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+++ + ++E + + + P TY L++ L K+GR ++
Sbjct: 474 QSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDE 533
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++ +YN ++D CK + +D+A + +++ + I P++ T+ L+ G C+ +
Sbjct: 534 MHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGK 593
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ R++ LL G+ D + + MI C F++AL LS+M E G P+ TY I
Sbjct: 594 LEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEI 653
Query: 366 LIRSL 370
+I SL
Sbjct: 654 IILSL 658
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 175/416 (42%), Gaps = 39/416 (9%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y +I+ L K A ++ +PD YN +I G+C+ V++A L +
Sbjct: 301 YGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKV 360
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
P+V+TY LI GFC ++ + + M +N+ P+ T LV G C D +
Sbjct: 361 SKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGF--CKDGN 418
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
EA +L M + P+ T+ +
Sbjct: 419 ---------------------------------IKEAKNVLAMMMKQSIKPDVVTYSSLM 445
Query: 193 T--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
CLV ++N+ I +T RGV +Y +++ K E + + +
Sbjct: 446 DGYCLVN--EVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQ 503
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+ +V +Y+ +ID CK + A E+ EM R P+++T+N+++ CK V K
Sbjct: 504 IFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAI 563
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
LL L G +PD T+ ++ LC++ + EDA +++ G + Y ++I+
Sbjct: 564 TLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGF 623
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
C G +L L KM+ + PD T+ +I S ++ + AEK M+ GL
Sbjct: 624 CDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 124/264 (46%), Gaps = 8/264 (3%)
Query: 242 YLNHVFKDRLVSNVNSYNMVID---CFCKVNMMDRATEICREMRDRDI-----APNLVTF 293
+L + RL + ++S+ ++I+ F K + ++ EI E I P+ +T
Sbjct: 207 FLKDFLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITL 266
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
T I G C ++H+ ++ GF D+ ++ ++I+ LC+ + AL+ L
Sbjct: 267 TTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDG 326
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
V P+ + YN +I +C V + L+ + + RI PD++T+NALI FC + K++
Sbjct: 327 KLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKD 386
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A F M + + PD +++S L+ K G EAK M + PD T + +++
Sbjct: 387 AIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMD 446
Query: 474 TLVQQGRFEEAHDIVKTSKERGIS 497
+A I T RG++
Sbjct: 447 GYCLVNEVNKAESIFNTMSHRGVT 470
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 8/220 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G++ + + YN +I+ K +D A F++M Q PD TY+ LI G+C+ G
Sbjct: 464 MSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGR 523
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ AL LV +M G P++ TY ++D C V + +L +K + + P+ T
Sbjct: 524 ISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTI 583
Query: 121 LVHGV---FRCLDPHKAFE-LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
LV G+ + D K FE LL++ + ++ + + EA A+L KM
Sbjct: 584 LVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAY----TVMIQGFCDKGLFDEALALLSKM 639
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
+ G +P++ T++ + L + + +L I RG+
Sbjct: 640 EENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ + G P YN+++DAL K + +D A ++ +PD TY IL+ G+C+ G
Sbjct: 534 MHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGK 593
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++A ++ + + GY +VY YT++I GFC+ E +L M+E P+ T
Sbjct: 594 LEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEI 653
Query: 121 LVHGVFRCLDPHKAFELLIRFMERE---PLTQKLVCNTLLYR 159
++ +F + A +LL + R LT LV + L+ R
Sbjct: 654 IILSLFEKDENDMAEKLLREMIMRGLLVALTDDLVASILVRR 695
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 184/385 (47%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ + + +DA K + A F QM V P+ FTY L+ G C+ G +D+
Sbjct: 298 LGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDD 357
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+ +M G PNV TYT+++DG C +VA VL +M+ V NE +L+H
Sbjct: 358 AIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIH 417
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G F + +A +LL + + TL++ L EA ++L KM D G P
Sbjct: 418 GHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRP 477
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ + + +E +L G++P TY L++ L KAG E +
Sbjct: 478 NTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHF 537
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + L NV Y +ID FCK+ + +A + EM D+ ++ + V + +LI GH K
Sbjct: 538 DKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQ 597
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ L ++E G + D + + I C + ++A LSEM+ G+ P+ Y
Sbjct: 598 GDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAY 657
Query: 364 NILIRSLCAIGDVARSLRLFQKMQA 388
N LIR +G++ + L +M++
Sbjct: 658 NCLIRKYQKLGNMEEASSLQNEMES 682
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 226/494 (45%), Gaps = 4/494 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L + P+TR N ++ L ++ L F+ + P+ FT+NI+I +C+ G + E
Sbjct: 162 LRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPA----PNVFTFNIVIDFLCKQGELVE 217
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L +M+ +G +P+V TY LIDG+ + EV ++ M++ + T +L++
Sbjct: 218 ARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALIN 277
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ KA+ + + +T + + EA + +M RG +P
Sbjct: 278 CFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMP 337
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ V L++ +LD + +G+ P TY ++++ L K G+ D L
Sbjct: 338 NEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVL 397
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + + +N Y +I +RA ++ EM+++ + ++ + TLI G CK
Sbjct: 398 SLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKV 457
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + + LL + +CG +P+ + +++D +A + +A+ L ++ + G+ PN +TY
Sbjct: 458 QKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTY 517
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI LC G + ++ F KM+ + P++ + LI FC++ + KA M+
Sbjct: 518 CALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVD 577
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ D Y++LI +K G A M + G D Y + +E
Sbjct: 578 KGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQE 637
Query: 484 AHDIVKTSKERGIS 497
A ++ GI+
Sbjct: 638 ARGVLSEMIGTGIT 651
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 204/464 (43%), Gaps = 18/464 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G SP YN++ID K ++ L +M C D TYN LI+ + G +++
Sbjct: 228 MGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEK 287
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +M+ LG NV T + +D FC V E ++ M+ R + PNE T SLV
Sbjct: 288 AYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVD 347
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE-----AAAILRKMGD 178
G + A LL E + Q LV N + Y + + + E A +L M
Sbjct: 348 GTCKAGRLDDAIVLL-----DEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMER 402
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETC----GILDTFIKRGVKPRFSTYLLLMEALYKAG 234
G +++ YT L+ G +N+ +L+ +G++ S Y L+ L K
Sbjct: 403 AGV--KANELLYTT--LIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQ 458
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
+ E L+ + L N Y ++D F K A + ++ D + PN+VT+
Sbjct: 459 KLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYC 518
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
LI G CK +++ + E G P+ + ++ID C+ A+ ++EMV+
Sbjct: 519 ALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDK 578
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G+ + + Y LI GD+ + L KM + D+Y + I FC MN +++A
Sbjct: 579 GMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEA 638
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
M+ G+ PD +Y+ LI+ K G +EA ME
Sbjct: 639 RGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMES 682
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 186/425 (43%), Gaps = 47/425 (11%)
Query: 113 PNEATVRSLVHGVFRCLDPHKAFELLIRFMER------EPLTQKLVCNTLLYRLSNNSMA 166
P+ + + S+ + L H + +R + R P T+ CN +L RL+ N
Sbjct: 127 PHRSALPSVFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTR--TCNHILLRLARN--- 181
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
++R++ + P TF+ + L +L E + G P TY L
Sbjct: 182 -RQGGLVRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSL 240
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ K G E + ++ + K ++V +YN +I+CF K +++A EM+ +
Sbjct: 241 IDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGV 300
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
N+VT +T + CK+ V + +L + G P++FT+ S++D C+A R +DA+
Sbjct: 301 MANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIV 360
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVA----------------------------- 377
L EMV G+ PN +TY +++ LC G VA
Sbjct: 361 LLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHF 420
Query: 378 ------RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
R+L L +M+ + D+ + LI C++ K+++A+ M GLRP+
Sbjct: 421 MNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTV 480
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
Y+ ++ A K+G+ EA + +G P+ T +++ L + G EA
Sbjct: 481 IYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKM 540
Query: 492 KERGI 496
+E G+
Sbjct: 541 RELGL 545
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%)
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
PN T+NI+I LC G++ + LF +M+A SPD+ T+N+LI + + ++E+ E
Sbjct: 197 PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELL 256
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
M G D +Y+ALI K G ++A F M++ G + T + ++ +
Sbjct: 257 VSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCK 316
Query: 478 QGRFEEAHDIVKTSKERGISFKSF 501
+G EA + + RG+ F
Sbjct: 317 EGLVREAMKLFAQMRVRGMMPNEF 340
>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
Length = 845
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/497 (25%), Positives = 222/497 (44%), Gaps = 40/497 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++I VK +D A+ F +M P N +I +C++ +D+A
Sbjct: 206 GLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKA 264
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+V++M G AP+++TY+++IDG C +K + + RVLE M E PN T SL+HG
Sbjct: 265 ESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHG 324
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
Y +S M +E+ + ++M G +P
Sbjct: 325 ---------------------------------YSIS--GMWNESVRVFKQMSSCGVIPT 349
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP---RFSTYLLLMEALYKAGRDVEGDR 241
+ + L NE I D+ + +G KP +ST + Y V
Sbjct: 350 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHN 409
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
N + + N + +N++I+ + + MMD+A I +M+++ + P+ VTF T+IS C
Sbjct: 410 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 469
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ + +++ G P + + +I C A + +SEM+ +PP +
Sbjct: 470 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 529
Query: 362 TY-NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
Y + +I +LC G VA + M P++ TFN+L++ +C + +E+A +
Sbjct: 530 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 589
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M ++G+ P+ + Y L+ K+GR D+A F M G P S ++IL L Q R
Sbjct: 590 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 649
Query: 481 FEEAHDIVKTSKERGIS 497
A + E G +
Sbjct: 650 TTAAKKMFHEMIESGTT 666
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 136/573 (23%), Positives = 242/573 (42%), Gaps = 80/573 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P + N++I L K +D A Q+M PD FTY+++I G+C+ +D+A
Sbjct: 240 GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 299
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R+++QM G PN TY LI G+ + E RV + M V P S +H
Sbjct: 300 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 359
Query: 125 VFR--------CL-------DP--------------------------HKAFELLIRFME 143
+F+ C+ P H F L+ +
Sbjct: 360 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLM---LT 416
Query: 144 REPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
+ K V N L+ + M +A I M ++G +P++ TF ++ L L++
Sbjct: 417 KGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDD 476
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEA---------------------------------- 229
+ + GV P + Y L++
Sbjct: 477 ALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 536
Query: 230 --LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
L K GR EG ++ + + NV ++N +++ +C V M+ A + M I
Sbjct: 537 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 596
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
PN + TL+ G+CK+ + + +L G KP ++ ++ L +A R A
Sbjct: 597 PNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKM 656
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
EM+E G + TY +++ LC + L +K+ A + DI TFN +I + +
Sbjct: 657 FHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFK 716
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ + ++A++ F ++ T GL P+ +YS +I LIK ++EA F+S+E++G DS
Sbjct: 717 VGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRL 776
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
N I+ L+ + +A + + E ++ ++
Sbjct: 777 LNHIVRMLLNKAEVAKASNYLSIIGENNLTLEA 809
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 141/309 (45%), Gaps = 39/309 (12%)
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
R P TY +L++ + R G + + K+ L + SY+++ F K +D+
Sbjct: 170 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG-FVKDGEVDK 228
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + EM ++ + P ++ N++I CK E+ K ++ +++ G PD FT++ +ID
Sbjct: 229 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 288
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
LC++ + A L +MVE G PN+ITYN LI G S+R+F++M + + P
Sbjct: 289 GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIP 348
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA------------------ 435
+ N+ I + + + +A+ F SM+ G +PD SYS
Sbjct: 349 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWH 408
Query: 436 --------------------LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
LI A + G D+A F M+ G PD+ T ++ +L
Sbjct: 409 NIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 468
Query: 476 VQQGRFEEA 484
+ GR ++A
Sbjct: 469 CRIGRLDDA 477
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 128/341 (37%), Gaps = 35/341 (10%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P + ++++I+ L K + M +P+ T+N L+ G C +G ++EA L
Sbjct: 527 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 586
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ M +G PN Y Y L+DG+C R+ + V M + V P ++HG+F+
Sbjct: 587 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 646
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
A ++ +E +L L N+ EA +L K+
Sbjct: 647 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL----------- 695
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
VK T+ +++ A++K GR E + +
Sbjct: 696 ------------------------FAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAIS 731
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
LV N+ +Y+M+I K + A + + A + N ++ AEV
Sbjct: 732 TYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVA 791
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
K L ++ E + T + + R ++ + + L
Sbjct: 792 KASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 832
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/490 (26%), Positives = 234/490 (47%), Gaps = 20/490 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSID--LAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
G P T +N + A V + +D LA L+ S PD F+YN++I G+ R G
Sbjct: 153 GARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGS 212
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+AL++ +M G APN TY +IDG + FR+ + M + PN T L+
Sbjct: 213 DALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLL 272
Query: 123 HGVFRC--LDPHKAF--ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
G+ R +D +A E+ M + T ++ + L + +M S L+K
Sbjct: 273 SGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKK--- 329
Query: 179 RGYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
G + + YT + L+ GL + + +L+ + G+ P + Y L+ Y
Sbjct: 330 -GVIIGA----YTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLING-YCQV 383
Query: 235 RDVEGDRYLNHVFKDRLVSNVN-SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
RD++G + K R + + +YN +I+ CK+ M+ A ++ EM + P++ TF
Sbjct: 384 RDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETF 443
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
NTLI + + ++ K +L + + G K + +F S++ C+ + +A+ L +M+
Sbjct: 444 NTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIH 503
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
V PN YN +I + G ++ L +KM++ +S I+T+N L++ C+ ++I++
Sbjct: 504 KDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDE 563
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
AE+ +++ GLRPD SY+ +I A G D A + M + P T + +L
Sbjct: 564 AEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLS 623
Query: 474 TLVQQGRFEE 483
L GR +
Sbjct: 624 ALGSAGRVHD 633
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/493 (23%), Positives = 218/493 (44%), Gaps = 10/493 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN VI L +S A F +M P++ TYN +I G + G ++ RL
Sbjct: 193 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRL 252
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
QM G PNV TY +L+ G C A R+ E +++ M ++ P+ T L G+ R
Sbjct: 253 RDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTR 312
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D L +++ + C+ LL L + ++A +L + G +P ++
Sbjct: 313 TGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAI 372
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + DL I + R ++P TY L+ L K E + + +
Sbjct: 373 YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEME 432
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K + +V ++N +ID + + +++ + +M+D+ I N+++F +++ CK+ ++
Sbjct: 433 KSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIP 492
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ +L ++ P+ +NS+ID + E A + +M GV + TYN+L+
Sbjct: 493 EAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLL 552
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+ LC + + L + + PD+ ++N +I + C ++A + M +R
Sbjct: 553 KGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIR 612
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS--YTSNLILETLVQQGRFEEAH 485
P +Y L+ AL +GR + + + M P S Y + E+ V
Sbjct: 613 PTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGTRCENESKVAS------- 665
Query: 486 DIVKTSKERGISF 498
+ K E+GI+F
Sbjct: 666 -LKKEMSEKGIAF 677
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 199/444 (44%), Gaps = 35/444 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ YN +ID VK ++ + QM D KP+ TYN+L+ G+CR G +DE
Sbjct: 225 GVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDET 284
Query: 65 LRLVKQMEGLGYAPNVYTYTILID-----------------------------------G 89
L+ +M P+ +TY+IL D G
Sbjct: 285 RALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNG 344
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C +VA+ +VLE++ + P A +L++G + D AF + + R
Sbjct: 345 LCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPD 404
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ N L+ L M +EA ++ +M G P TF+ + L + +L
Sbjct: 405 HITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLS 464
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+G+K ++ +++A K G+ E L+ + +V N YN +ID + +
Sbjct: 465 DMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESG 524
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
++A + +M+ ++ ++ T+N L+ G CK++++ + EL+ L G +PD ++N
Sbjct: 525 GTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYN 584
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++I C + AL+ L EM ++ + P TY+ L+ +L + G V L+Q M
Sbjct: 585 TIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHK 644
Query: 390 RISPDIYTFNALIQSFCRMNKIEK 413
+ P + ++ ++ ++K
Sbjct: 645 NVEPSSSIYGTRCENESKVASLKK 668
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 189/426 (44%), Gaps = 2/426 (0%)
Query: 78 PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFEL 137
P++ + +L++ + R A+V ++ P+ V D +A +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180
Query: 138 LIRFMERE--PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCL 195
L R E P N ++ L + S+A + +M DRG P T++ +
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240
Query: 196 VTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNV 255
V G DL + D ++ G KP TY +L+ L +AGR E ++ + ++ +
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG 300
Query: 256 NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
+Y+++ D + + E + + T + L++G CKD +V K ++L M
Sbjct: 301 FTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEM 360
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
L+ G P +N++I+ C+ + A +M + P+ ITYN LI LC +
Sbjct: 361 LVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEM 420
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+ + L +M+ + P + TFN LI ++ R ++EK M G++ + S+ +
Sbjct: 421 ITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGS 480
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
++KA K+G+ EA M P++ N I++ ++ G E+A +V+ K G
Sbjct: 481 VVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSG 540
Query: 496 ISFKSF 501
+S F
Sbjct: 541 VSASIF 546
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 136/581 (23%), Positives = 246/581 (42%), Gaps = 89/581 (15%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMS-----VDQ----------CK------ 42
G P+ YNA++ ++++ +D A L ++MS +D+ CK
Sbjct: 235 FGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWRE 294
Query: 43 -----------PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFC 91
P+ YN +I G+C +EA+ + +M PNV TY IL+ G
Sbjct: 295 ALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCL 354
Query: 92 NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE------ 145
N K++ R+L +M P+ SLVH + D A++LL + + E
Sbjct: 355 NKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYV 414
Query: 146 -----------------PLT---------QKLVCNTLLYRLSNNSMA---------SEAA 170
P+T + L T+L +++ S A +A
Sbjct: 415 VYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAY 474
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
++ +M G++P++ST+ + L + + GV P TY +L++
Sbjct: 475 KVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCF 534
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
KAG + +L+ + +D V +Y +I + K + A E+ M + PN+
Sbjct: 535 SKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNV 594
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLL----------------ECGFKPDKFTFNSMIDC 334
+T+ LI G+CK + K ++ + KP+ T+ +++D
Sbjct: 595 ITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDG 654
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LC+AH+ +DA D L M G PNTI Y+ LI C + + +F KM +P+
Sbjct: 655 LCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPN 714
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+YT+++LI + +++ K ML P+ Y+ +I L K + DEA + L
Sbjct: 715 VYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLML 774
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
ME+ GC P+ T +++ + G+ ++ ++ + +G
Sbjct: 775 MMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKG 815
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 126/509 (24%), Positives = 221/509 (43%), Gaps = 24/509 (4%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ + Y ++ + + M + C P +N L+H C+ A +L
Sbjct: 341 PNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKL 400
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV-- 125
+K+ME P Y ILI C+ + K N + TV + V+ V
Sbjct: 401 LKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSF 460
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-----LSNNSMASEAAAILRKMGDRG 180
RCL FE + + E + V +T Y L N S A + ++M G
Sbjct: 461 ARCLCGFGKFEKAYKVI-HEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTG 519
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P+ T+ + C + + LD ++ G +P TY L+ A KA + +
Sbjct: 520 VVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVAN 579
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR-DRDIA------------ 287
+ NV +Y +ID +CK +++A +I MR D DI
Sbjct: 580 ELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNV 639
Query: 288 ---PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
PN+VT+ L+ G CK +V R+LL + G +P+ ++++ID C+A + ++A
Sbjct: 640 AEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEA 699
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
+ +MVE G PN TY+ LI L + L++ KM + +P+I + +I
Sbjct: 700 QEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDG 759
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
++ K ++A K M G +P+ +Y+A+I K+G+ D+ + F M GC P+
Sbjct: 760 LSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPN 819
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKE 493
T +++ G +EA+ +++ K+
Sbjct: 820 FVTYTVLINHCCATGHLDEAYALLEEMKQ 848
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 123/515 (23%), Positives = 223/515 (43%), Gaps = 54/515 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T Y+ VI L ++ ++ A+ F++M PD +TY ILI + G++ +A
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQA 543
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G P V TYT LI + AK+V+ + E+M + PN T +L+ G
Sbjct: 544 HNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDG 603
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + KA ++ R + + +++ NN P
Sbjct: 604 YCKSGNIEKACQIYARMRGDADIPDV----DMYFKIKNNVAEK---------------PN 644
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ V L + + +L+T G +P Y L++ KA + E +
Sbjct: 645 VVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFH 704
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + NV +Y+ +ID K +D ++ +M + APN+V + +I G K A
Sbjct: 705 KMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVA 764
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + +L++M+ E G KP+ T+ +MID +A + + L+ EM G PN +TY
Sbjct: 765 KTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYT 824
Query: 365 ILIRSLCAIGDVAR---------------------------------SLRLFQKMQADRI 391
+LI CA G + SL L ++++ +
Sbjct: 825 VLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGS 884
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT--LGLRPDNFSYSALIKALIKSGRFDEA 449
+P I + LI +F + ++E A + +++ + + Y++LI + + + D A
Sbjct: 885 APTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHA 944
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ F M ++G PD T +L L++ R+EEA
Sbjct: 945 FELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEA 979
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 217/480 (45%), Gaps = 28/480 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y +ID K+ I A+ +M D C+P TY LIH + V A
Sbjct: 519 GVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVA 578
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK--------------ERN 110
L + M G PNV TYT LIDG+C + + + ++ M+ + N
Sbjct: 579 NELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNN 638
Query: 111 VC--PNEATVRSLVHGVFRCLDPHKAFELL-IRFMER-EPLTQKLVCNTLLYRLSNNSMA 166
V PN T +LV G+ + A +LL F++ EP T +V + L+ +
Sbjct: 639 VAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNT--IVYDALIDGFCKAAKL 696
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
EA + KM +RGY P T+ + L L+ +L ++ P Y +
Sbjct: 697 DEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEM 756
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ L K + E + + + + NV +Y +ID F K +D+ E+ REM +
Sbjct: 757 IDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGC 816
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
APN VT+ LI+ C + + LL + + + ++ +I+ R F +L
Sbjct: 817 APNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR--EFILSLG 874
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS----PDIYTFNALI 402
L E+ + G P + Y +LI + G + +L L +++ + +S ++YT +LI
Sbjct: 875 LLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYT--SLI 932
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
SF +KI+ A + F+ M+ G+ PD ++ L+ LI+ R++EA Q S+ Q N
Sbjct: 933 YSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDIN 992
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 135/578 (23%), Positives = 231/578 (39%), Gaps = 97/578 (16%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILI------------------ 52
+L N +I ++ ++A + ++ KP R TYN L+
Sbjct: 207 KLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHRE 266
Query: 53 -----------------HGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR 95
+C++G EAL L+++ + + PN Y +I G C A
Sbjct: 267 MSELGLSMDEFTLGFFAQALCKVGKWREALSLIEKED---FVPNTILYNKMISGLCEASF 323
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT 155
E L M+ + PN T R L+ G + +L + + N+
Sbjct: 324 FEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNS 383
Query: 156 LLYRLSNNSMASEAAAILRKMG-------------------DRGYLPESSTFDYTVTC-- 194
L++ + S A +L+KM G LP TF+
Sbjct: 384 LVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYN 443
Query: 195 --LVTGLDLNET---------CG---------ILDTFIKRGVKPRFSTYLLLMEALYKAG 234
L G LN+ CG ++ + G P STY ++ L A
Sbjct: 444 EMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNAS 503
Query: 235 RDVEGDRYLNHVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
R VE +L K +V +V +Y ++IDCF K ++ +A EM P +VT+
Sbjct: 504 R-VENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTY 562
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM-V 352
TLI + K +V EL +++ G P+ T+ ++ID C++ E A + M
Sbjct: 563 TTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRG 622
Query: 353 EWGVP---------------PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
+ +P PN +TY L+ LC V + L + M D P+
Sbjct: 623 DADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIV 682
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
++ALI FC+ K+++A++ F M+ G P+ ++YS+LI L K R D + M
Sbjct: 683 YDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKML 742
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+N C P+ +++ L + + +EA+ ++ +E+G
Sbjct: 743 ENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKG 780
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 158/354 (44%), Gaps = 11/354 (3%)
Query: 139 IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTG 198
IR ++E L + L N L+ + N + + A L ++ D GY P T++ V +
Sbjct: 197 IRGDDKEVLGKLL--NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRA 254
Query: 199 LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY 258
L+ + + G+ T +AL K G+ E L+ + K+ V N Y
Sbjct: 255 DKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREA---LSLIEKEDFVPNTILY 311
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
N +I C+ + + A + MR PN+ T+ L+ G ++ + + +L M++
Sbjct: 312 NKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIA 371
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
G P FNS++ C++ F A L +M + P + YNILI S+C+ G++
Sbjct: 372 EGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPG 431
Query: 379 --SLRLFQKMQADRISPDIYTFNALIQSF----CRMNKIEKAEKAFFSMLTLGLRPDNFS 432
+ L +K + +S + SF C K EKA K M+ G PD +
Sbjct: 432 PVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTST 491
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
YS +I L + R + A F M+ G PD YT ++++ + G ++AH+
Sbjct: 492 YSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHN 545
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 118/281 (41%), Gaps = 44/281 (15%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+YN ++ F + + +D A + REM + ++ + T CK V K RE L ++
Sbjct: 243 TYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCK---VGKWREALSLI 299
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALD------------------------------ 346
+ F P+ +N MI LC A FE+A+D
Sbjct: 300 EKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQL 359
Query: 347 -----CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
LS M+ G P+ +N L+ + C D + + +L +KM+ P +N L
Sbjct: 360 GRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNIL 419
Query: 402 IQSFCRMNKI------EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
I S C ++ E AEKA+ ML+ G + + + + L G+F++A +
Sbjct: 420 IGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHE 479
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M NG PD+ T + ++ L R E A + K K G+
Sbjct: 480 MMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGV 520
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/581 (22%), Positives = 247/581 (42%), Gaps = 93/581 (16%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFT-------------------- 47
PS YN +I A +K++ +D A L ++MS+ + D FT
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 48 ------------YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR 95
Y LI G+C + +EA+ + +M PNV TY+ L+ G N K+
Sbjct: 293 VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQ 352
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME------------ 143
+ RVL +M P+ SLVH D A++LL + ++
Sbjct: 353 LGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNI 412
Query: 144 --------------------REPLTQKLVCNTLLYRLSNNSMA---------SEAAAILR 174
+ ++ L +L +++ +S +A +++R
Sbjct: 413 LIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIR 472
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
+M +G++P++ST+ + L + + + + G+ TY +++++ KAG
Sbjct: 473 EMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 532
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
+ ++ N + + NV +Y +I + K + A E+ M PN+VT++
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFK------------------PDKFTFNSMIDCLC 336
LI GHCK +V K ++ + CG K P+ T+ +++D C
Sbjct: 593 ALIDGHCKAGQVEKACQIFERM--CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 650
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
++HR E+A L M G PN I Y+ LI LC +G + + + +M +Y
Sbjct: 651 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 710
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
T+++LI + ++ + + A K ML P+ Y+ +I L K G+ DEA + M
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
E+ GC P+ T +++ G+ E ++++ +G++
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 811
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 121/515 (23%), Positives = 221/515 (42%), Gaps = 54/515 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T Y+ V++ L ++ ++LA+L F++M D +TY I++ C+ G++++A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M +G PNV TYT LI + AK+V+ + E M PN T +L+ G
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KA ++ R+ + + ++ D P
Sbjct: 598 HCKAGQVEKACQIF-------------------ERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + + E +LD G +P Y L++ L K G+ E
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + + +Y+ +ID + KV D A+++ +M + APN+V + +I G CK
Sbjct: 699 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + +L+ M+ E G +P+ T+ +MID + E L+ L M GV PN +TY
Sbjct: 759 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 818
Query: 365 ILIRSLCAIG--DVAR-------------------------------SLRLFQKMQADRI 391
+LI C G DVA SL L ++ D
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDT 878
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS--YSALIKALIKSGRFDEA 449
+P + + LI + + ++E A + + T ++S Y++LI++L + + + A
Sbjct: 879 APFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETA 938
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
Q F M + G P+ + +++ L + + EA
Sbjct: 939 FQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 203/478 (42%), Gaps = 24/478 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGIC------RI 58
G PS +++N+++ A S AY ++M P YNILI IC
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 59 GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
++D A + +M G N + C+A + + F V+ M + P+ +T
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMG 177
+++ + AF LL M+R L + T++ + +A +M
Sbjct: 487 SKVLNYLCNASKMELAF-LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG--- 234
+ G P T+ + + ++ + +T + G P TY L++ KAG
Sbjct: 546 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 605
Query: 235 ------------RDV-EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+DV + D Y + NV +Y ++D FCK + ++ A ++ M
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
PN + ++ LI G CK ++ + +E+ + E GF +T++S+ID + R
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 725
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+ A LS+M+E PN + Y +I LC +G + +L Q M+ P++ T+ A+
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
I F + KIE + M + G+ P+ +Y LI K+G D A M+Q
Sbjct: 786 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT 843
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/546 (21%), Positives = 217/546 (39%), Gaps = 54/546 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G + +YNA++D +V+ + + QQ+ D + N+L+ CR G
Sbjct: 159 IGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSI 218
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR---------------------------- 95
AL + +++ + P+ TY LI F A R
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 96 ----VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL 151
V + L +++ N P+ L+ G+ +A + L R L +
Sbjct: 279 SLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVV 338
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
+TLL N +L M G P F+ V T D + +L
Sbjct: 339 TYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 398
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGD------RYLNHVFKDRLVSNVNSYNMVIDCF 265
+K G P + Y +L+ ++ + D + + + +V N + + C
Sbjct: 399 VKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCL 458
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C ++A + REM + P+ T++ +++ C +++ L + G D
Sbjct: 459 CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV 518
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
+T+ M+D C+A E A +EM E G PN +TY LI + V+ + LF+
Sbjct: 519 YTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFET 578
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL----------------GLRPD 429
M ++ P+I T++ALI C+ ++EKA + F M RP+
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y AL+ KS R +EA++ +M GC P+ + +++ L + G+ +EA ++
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Query: 490 TSKERG 495
E G
Sbjct: 699 EMSEHG 704
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 199/464 (42%), Gaps = 55/464 (11%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G +P+ Y A+I A +K+ + A F+ M + C P+ TY+ LI G C+ G V++
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 64 ALRLVKQMEGL----------------GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
A ++ ++M G PNV TY L+DGFC + RV E ++L+ M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
PN+ +L+ G+ + +A E+ E ++L+ R
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
A+ +L KM L +C P Y ++
Sbjct: 727 LASKVLSKM------------------------LENSCA-----------PNVVIYTEMI 751
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
+ L K G+ E + + + + NV +Y +ID F + ++ E+ M + +A
Sbjct: 752 DGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 811
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
PN VT+ LI CK+ + LL + + + + +I+ + F ++L
Sbjct: 812 PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGL 869
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY--TFNALIQSF 405
L E+ + P Y +LI +L + +LRL +++ + Y T+N+LI+S
Sbjct: 870 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESL 929
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
C NK+E A + F M G+ P+ S+ +LIK L ++ + EA
Sbjct: 930 CLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 149/343 (43%), Gaps = 39/343 (11%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y A++D KS+ ++ A MS++ C+P++ Y+ LI G+C++G +DEA +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 68 VKQMEGLGY-----------------------------------APNVYTYTILIDGFCN 92
+M G+ APNV YT +IDG C
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
+ E ++++++M+E+ PN T +++ G ELL R + +
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
L+ N A +L +M + ++ + + + E+ G+LD
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIG 874
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV--FKDRLVSNVNSYNMVIDCFCKVNM 270
+ P S Y LL++ L KA R R L V F LV ++YN +I+ C N
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
++ A ++ EM + + P + +F +LI G +++++ + LL
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 99/238 (41%), Gaps = 35/238 (14%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ +Y +ID L K D AY Q M C+P+ TY +I G IG ++ L
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG-- 124
L+++M G APN TY +LID C + +LE MK+ + + A R ++ G
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFN 860
Query: 125 -----------------------VFRCLDPH----KAFELLIRFMER-EPLTQKLV---- 152
V+R L + + E+ +R +E + LV
Sbjct: 861 KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSS 920
Query: 153 -CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
N+L+ L + A + +M +G +PE +F + L ++E +LD
Sbjct: 921 TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
+ G+K +N+++D + R + + L ++ + N+L+R C G +
Sbjct: 158 QIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFS 217
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+L +++ R P T+N LIQ+F + ++++ A M LR D F+
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFA 277
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+L K G++ EA +E PD+ ++ L + FEEA D +
Sbjct: 278 YSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFL 325
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRF--TYNILIHGICRIGVVDEA 64
+P +Y +ID L+K+ +++A ++++ + TYN LI +C V+ A
Sbjct: 879 APFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETA 938
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNV 111
+L +M G P + ++ LI G +++E +L+ + +
Sbjct: 939 FQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEI 985
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 220/504 (43%), Gaps = 58/504 (11%)
Query: 13 YNAVIDALVKSNSIDL-------------------------AYLK----------FQQMS 37
+N +ID L+K N +L AY K F+ M
Sbjct: 94 HNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMK 153
Query: 38 VDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVA 97
CKPD FTYN ++H + R VV AL + +M L PN+ T++ILIDG C + +
Sbjct: 154 DFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQ 213
Query: 98 EVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL 157
++ + M +R + PN+ T ++ G+ + A+ L I + + + N LL
Sbjct: 214 NALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALL 273
Query: 158 YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIK 213
+ EA +L+ Y+ + + +CL+ GL + +
Sbjct: 274 HGFCKLGRVDEALGLLKYFEKDRYVLDKQGY----SCLIDGLFRARRFEDAQVWYRKMTE 329
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
+KP Y ++M+ L KAG+ + R LN + + LV + + YN +I +C + ++D
Sbjct: 330 HNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDE 389
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + E+ D + T+ LI G C+ V +++ + + G P TFN++ID
Sbjct: 390 AKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALID 449
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPP--------------NTITYNILIRSLCAIGDVARS 379
C+A E A +M E G P +T + ++ LC G + ++
Sbjct: 450 GFCKAGNIEKAQLLFYKM-EIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKA 508
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+ ++ +P+I T+N LI FC+ I A K F + GL PD+ +Y LI
Sbjct: 509 YNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLING 568
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNP 463
L+ + R ++A + +NGC P
Sbjct: 569 LLSANREEDAFTVLDQILKNGCTP 592
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 150/581 (25%), Positives = 242/581 (41%), Gaps = 96/581 (16%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S S + +I A K + I+ A F+ M CKPD FTYN ++H + R VV A
Sbjct: 121 GFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLA 180
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + +M L PN+ T++ILIDG C + + ++ + M +R + PN+ T ++ G
Sbjct: 181 LGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISG 240
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A+ L I + + + N LL+ EA +L+ Y+ +
Sbjct: 241 LCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLD 300
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ +CL+ GL + + +KP Y ++M+ L KAG+ +
Sbjct: 301 KQGY----SCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDAL 356
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI----------------------- 277
R LN + + LV + + YN +I +C + ++D A +
Sbjct: 357 RLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGM 416
Query: 278 CR------------EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
CR EM P++VTFN LI G CK + K +LL +E G P
Sbjct: 417 CRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKA-QLLFYKMEIGRNPSL 475
Query: 326 F--------------TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
F + +M++ LC + A + L ++ + G PN ITYNILI C
Sbjct: 476 FLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFC 535
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA---------------EK 416
G++ + +LF+++Q +SPD T+ LI N+ E A +
Sbjct: 536 KAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITE 595
Query: 417 AFFSMLTLGLRPD--NFSYSALIKAL-----------------IKSGRFDEAKQTFLSME 457
+ S +T R + ++S +K L + G +EA + L M+
Sbjct: 596 VYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEMD 655
Query: 458 --QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
N YT LI L Q GR EEA I T +E +
Sbjct: 656 FKLNDFQLAPYTIWLI--GLCQAGRLEEALKIFFTLEEHNV 694
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 123/258 (47%)
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
G R+ K R + + S+NM+ID K N + ++ +E++ + + F LI
Sbjct: 75 GFRFFIWASKFRRLRSWVSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQ 134
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
+ K + K E M+ + KPD FT+N+++ + R AL + M++ P
Sbjct: 135 AYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLP 194
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N T++ILI +C G +L++F +M RI P+ T+ +I C+ K + A + F
Sbjct: 195 NIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLF 254
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+M G PD+ +Y+AL+ K GR DEA E++ D + +++ L +
Sbjct: 255 IAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRA 314
Query: 479 GRFEEAHDIVKTSKERGI 496
RFE+A + E I
Sbjct: 315 RRFEDAQVWYRKMTEHNI 332
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 87/238 (36%), Gaps = 69/238 (28%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
+++ L S I AY Q++ P+ TYNILIHG C+ G ++ A +L K+++
Sbjct: 493 QTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQL 552
Query: 74 LGYAPNVYTYTILIDGFCNAKR------------------VAEVFRVL------------ 103
G +P+ TY LI+G +A R + EV++
Sbjct: 553 KGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITL 612
Query: 104 -----------------EIMK--ERNVCPNEA--TVRSLVHGVFRC----LDPH------ 132
E++K E N E VR L+ F+ L P+
Sbjct: 613 AFSLWLKYLRSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIG 672
Query: 133 --------KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+A ++ E L C L+YRL AA I D+GY+
Sbjct: 673 LCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYM 730
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 84/212 (39%), Gaps = 35/212 (16%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICR------- 57
G+SP + Y +I+ L+ +N + A+ Q+ + C P Y + CR
Sbjct: 554 GLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLA 613
Query: 58 ---------------------------IGVVDEALRLVKQMEGLGYAPNVYTYTILIDGF 90
G V+EA+R + +M+ + YTI + G
Sbjct: 614 FSLWLKYLRSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGL 673
Query: 91 CNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQK 150
C A R+ E ++ ++E NV + L++ + + + A E+ + +++ +
Sbjct: 674 CQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYMLMP 733
Query: 151 LVCNTLLYR-LSNNSMASEAAAILRKMGDRGY 181
+CN LL L + + A +L +M GY
Sbjct: 734 RICNRLLKSLLRSEDKRNRAFDLLSRMKSLGY 765
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/581 (22%), Positives = 247/581 (42%), Gaps = 93/581 (16%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFT-------------------- 47
PS YN +I A +K++ +D A L ++MS+ + D FT
Sbjct: 192 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 251
Query: 48 ------------YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR 95
Y LI G+C + +EA+ + +M PNV TY+ L+ G N K+
Sbjct: 252 VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQ 311
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME------------ 143
+ RVL +M P+ SLVH D A++LL + ++
Sbjct: 312 LGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNI 371
Query: 144 --------------------REPLTQKLVCNTLLYRLSNNSMA---------SEAAAILR 174
+ ++ L +L +++ +S +A +++R
Sbjct: 372 LIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIR 431
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
+M +G++P++ST+ + L + + + + G+ TY +++++ KAG
Sbjct: 432 EMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 491
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
+ ++ N + + NV +Y +I + K + A E+ M PN+VT++
Sbjct: 492 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 551
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFK------------------PDKFTFNSMIDCLC 336
LI GHCK +V K ++ + CG K P+ T+ +++D C
Sbjct: 552 ALIDGHCKAGQVEKACQIFERM--CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 609
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
++HR E+A L M G PN I Y+ LI LC +G + + + +M +Y
Sbjct: 610 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 669
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
T+++LI + ++ + + A K ML P+ Y+ +I L K G+ DEA + M
Sbjct: 670 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 729
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
E+ GC P+ T +++ G+ E ++++ +G++
Sbjct: 730 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 770
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/515 (23%), Positives = 221/515 (42%), Gaps = 54/515 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T Y+ V++ L ++ ++LA+L F++M D +TY I++ C+ G++++A
Sbjct: 437 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 496
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M +G PNV TYT LI + AK+V+ + E M PN T +L+ G
Sbjct: 497 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 556
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KA ++ R+ + + ++ D P
Sbjct: 557 HCKAGQVEKACQIF-------------------ERMCGSKDVPDVDMYFKQYDDNSERPN 597
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + + E +LD G +P Y L++ L K G+ E
Sbjct: 598 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 657
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + + +Y+ +ID + KV D A+++ +M + APN+V + +I G CK
Sbjct: 658 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 717
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + +L+ M+ E G +P+ T+ +MID + E L+ L M GV PN +TY
Sbjct: 718 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 777
Query: 365 ILIRSLCAIG--DVAR-------------------------------SLRLFQKMQADRI 391
+LI C G DVA SL L ++ D
Sbjct: 778 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDT 837
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS--YSALIKALIKSGRFDEA 449
+P + + LI + + ++E A + + T ++S Y++LI++L + + + A
Sbjct: 838 APFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETA 897
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
Q F M + G P+ + +++ L + + EA
Sbjct: 898 FQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 932
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 203/478 (42%), Gaps = 24/478 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGIC------RI 58
G PS +++N+++ A S AY ++M P YNILI IC
Sbjct: 326 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNF 385
Query: 59 GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
++D A + +M G N + C+A + + F V+ M + P+ +T
Sbjct: 386 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 445
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMG 177
+++ + AF LL M+R L + T++ + +A +M
Sbjct: 446 SKVLNYLCNASKMELAF-LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 504
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG--- 234
+ G P T+ + + ++ + +T + G P TY L++ KAG
Sbjct: 505 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 564
Query: 235 ------------RDV-EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+DV + D Y + NV +Y ++D FCK + ++ A ++ M
Sbjct: 565 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 624
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
PN + ++ LI G CK ++ + +E+ + E GF +T++S+ID + R
Sbjct: 625 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 684
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+ A LS+M+E PN + Y +I LC +G + +L Q M+ P++ T+ A+
Sbjct: 685 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 744
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
I F + KIE + M + G+ P+ +Y LI K+G D A M+Q
Sbjct: 745 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT 802
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/546 (21%), Positives = 217/546 (39%), Gaps = 54/546 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G + +YNA++D +V+ + + QQ+ D + N+L+ CR G
Sbjct: 118 IGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSI 177
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR---------------------------- 95
AL + +++ + P+ TY LI F A R
Sbjct: 178 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 237
Query: 96 ----VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL 151
V + L +++ N P+ L+ G+ +A + L R L +
Sbjct: 238 SLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVV 297
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
+TLL N +L M G P F+ V T D + +L
Sbjct: 298 TYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 357
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGD------RYLNHVFKDRLVSNVNSYNMVIDCF 265
+K G P + Y +L+ ++ + D + + + +V N + + C
Sbjct: 358 VKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCL 417
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C ++A + REM + P+ T++ +++ C +++ L + G D
Sbjct: 418 CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV 477
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
+T+ M+D C+A E A +EM E G PN +TY LI + V+ + LF+
Sbjct: 478 YTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFET 537
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL----------------GLRPD 429
M ++ P+I T++ALI C+ ++EKA + F M RP+
Sbjct: 538 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 597
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y AL+ KS R +EA++ +M GC P+ + +++ L + G+ +EA ++
Sbjct: 598 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 657
Query: 490 TSKERG 495
E G
Sbjct: 658 EMSEHG 663
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 199/464 (42%), Gaps = 55/464 (11%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G +P+ Y A+I A +K+ + A F+ M + C P+ TY+ LI G C+ G V++
Sbjct: 506 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 565
Query: 64 ALRLVKQMEGL----------------GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
A ++ ++M G PNV TY L+DGFC + RV E ++L+ M
Sbjct: 566 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 625
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
PN+ +L+ G+ + +A E+ E ++L+ R
Sbjct: 626 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 685
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
A+ +L KM L +C P Y ++
Sbjct: 686 LASKVLSKM------------------------LENSCA-----------PNVVIYTEMI 710
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
+ L K G+ E + + + + NV +Y +ID F + ++ E+ M + +A
Sbjct: 711 DGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 770
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
PN VT+ LI CK+ + LL + + + + +I+ + F ++L
Sbjct: 771 PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGL 828
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY--TFNALIQSF 405
L E+ + P Y +LI +L + +LRL +++ + Y T+N+LI+S
Sbjct: 829 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESL 888
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
C NK+E A + F M G+ P+ S+ +LIK L ++ + EA
Sbjct: 889 CLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 932
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 149/343 (43%), Gaps = 39/343 (11%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y A++D KS+ ++ A MS++ C+P++ Y+ LI G+C++G +DEA +
Sbjct: 596 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 655
Query: 68 VKQMEGLGY-----------------------------------APNVYTYTILIDGFCN 92
+M G+ APNV YT +IDG C
Sbjct: 656 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 715
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
+ E ++++++M+E+ PN T +++ G ELL R + +
Sbjct: 716 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 775
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
L+ N A +L +M + ++ + + + E+ G+LD
Sbjct: 776 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIG 833
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV--FKDRLVSNVNSYNMVIDCFCKVNM 270
+ P S Y LL++ L KA R R L V F LV ++YN +I+ C N
Sbjct: 834 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 893
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
++ A ++ EM + + P + +F +LI G +++++ + LL
Sbjct: 894 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 936
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 103/247 (41%), Gaps = 36/247 (14%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ +Y +ID L K D AY Q M C+P+ TY +I G IG ++ L
Sbjct: 700 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 759
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG-- 124
L+++M G APN TY +LID C + +LE MK+ + + A R ++ G
Sbjct: 760 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFN 819
Query: 125 -----------------------VFRCLDPH----KAFELLIRFMER-EPLTQKLV---- 152
V+R L + + E+ +R +E + LV
Sbjct: 820 KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSS 879
Query: 153 -CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
N+L+ L + A + +M +G +PE +F + L ++E +LD F
Sbjct: 880 TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD-F 938
Query: 212 IKRGVKP 218
I V P
Sbjct: 939 ISHMVCP 945
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
+ G+K +N+++D + R + + L ++ + N+L+R C G +
Sbjct: 117 QIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFS 176
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+L +++ R P T+N LIQ+F + ++++ A M LR D F+
Sbjct: 177 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFA 236
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+L K G++ EA +E PD+ ++ L + FEEA D +
Sbjct: 237 YSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFL 284
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/503 (25%), Positives = 233/503 (46%), Gaps = 4/503 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKF-QQMSVDQCKPDRFTYNILIHGICRIG 59
+ G +PS NA++ ++VKS D++ F ++M + PD T+NILI+ +C G
Sbjct: 149 MGLYGFNPSVYTCNAILGSIVKSCE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEG 207
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
++ L+++ME GYAP + TY ++ +C R +L+ M + V + T
Sbjct: 208 SFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYN 267
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
L+H + R K + LL +R ++ NTLL SN A +L +M
Sbjct: 268 MLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTF 327
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK-AGRDVE 238
G P TF+ + ++ + E + +G+ +Y +L++ L K A D+
Sbjct: 328 GLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLA 387
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
Y+ V + +Y +ID CK +D A + EM I P++VT++ LI+
Sbjct: 388 RGFYMRMKRNGVCVGRI-TYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALIN 446
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G C+ + +E++ + G P+ ++++I CR ++ + M+ G P
Sbjct: 447 GFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTP 506
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ T+N+L+ SLC G VA + + M +D I P+ +F+ LI + + KA F
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVF 566
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M +G P F+Y +L+K L K G A++ S++ D+ N ++ + +
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKS 626
Query: 479 GRFEEAHDIVKTSKERGISFKSF 501
G ++A + +R I SF
Sbjct: 627 GNLDKAVSLFGEMVQRSILPDSF 649
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 139/531 (26%), Positives = 226/531 (42%), Gaps = 50/531 (9%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y ++D L K+ DLA + +M + R TY +I G+C+ G +DEA+ ++ +M
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMS 430
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR--CL- 129
G P++ TY+ LI+GFC R+ ++ + + PN +L++ R CL
Sbjct: 431 KDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
+ + +E +I P N L+ L +EA +R M G LP + +FD
Sbjct: 491 ETIRIYEAMI-LEGNTP--DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFD 547
Query: 190 YTVTCLVTGLDLN----ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
CL+ G + + + D K G P F TY L++ L K G + +++L
Sbjct: 548 ----CLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKS 603
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD-- 303
+ + N +I CK +D+A + EM R I P+ T+ +LISG C+
Sbjct: 604 LQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGK 663
Query: 304 -------AEVHKTRELLV---MLLEC------------------------GFKPDKFTFN 329
A+ + R LV ++ C G D T N
Sbjct: 664 TVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTN 723
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+MID R + E D L EM PN TYNIL+ V+ S L++ M
Sbjct: 724 AMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILS 783
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
I PD T ++I C N +E K + + G+ D +++ LI +G + A
Sbjct: 784 GILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWA 843
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
M G + D T + I+ L + RF+E+ ++ ++GIS +S
Sbjct: 844 FDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPES 894
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 204/456 (44%), Gaps = 35/456 (7%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
C + ++ILI R G++ ++L + + M G+ P+VYT ++ + V+
Sbjct: 119 CNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVW 178
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
L+ M +R +CP+ AT F +LI + E +K
Sbjct: 179 SFLKEMLKRKICPDVAT-----------------FNILINVLCAEGSFKK---------- 211
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
++ +++KM GY P T++ + +LD +GV
Sbjct: 212 --------SSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADV 263
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY +L+ L ++ R +G L + K + N +YN +++ F + A ++ E
Sbjct: 264 CTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNE 323
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M ++PN VTFN LI GH + + ++ M+ G + ++ ++D LC+
Sbjct: 324 MLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAE 383
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
F+ A M GV ITY +I LC G + ++ + +M D I PDI T++A
Sbjct: 384 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSA 443
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI FCR+ +++ A++ + +GL P+ YS LI + G E + + +M G
Sbjct: 444 LINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEG 503
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
PD +T N+++ +L + G+ EA + ++ GI
Sbjct: 504 NTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 125/567 (22%), Positives = 244/567 (43%), Gaps = 79/567 (13%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP+ +Y+ +I + + ++ M ++ PD FT+N+L+ +C+ G V E
Sbjct: 467 VGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAE 526
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ M G PN ++ LI+G+ ++ + F V + M + P T SL+
Sbjct: 527 AEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 586
Query: 124 GVFRCLDPHK-AFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
G+ C H A E ++ ++ P ++CNTL+ + + +A ++ +M R
Sbjct: 587 GL--CKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSI 644
Query: 182 LPESSTFDYTV--------------------------------TCLVTGL---------- 199
LP+S T+ + TC V G+
Sbjct: 645 LPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGF 704
Query: 200 -------------DLNETCGILDTFIKRG----------------VKPRFSTYLLLMEAL 230
D+ T ++D + + G P +TY +L+
Sbjct: 705 YFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHG- 763
Query: 231 YKAGRDVEGD--RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
Y + V Y + + L + Y++++ C+ NM++ +I + R +
Sbjct: 764 YSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILG-ICESNMLEIGLKILKAFICRGVEV 822
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+ TFN LIS C + E++ +++ ++ G DK T ++++ L R HRF+++ L
Sbjct: 823 DRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVL 882
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
EM + G+ P + Y L+ LC +GD+ + + ++M A +I P +A++++ +
Sbjct: 883 HEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 942
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
K ++A SML + L P S++ L+ K+G EA + + M G D +
Sbjct: 943 GKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSY 1002
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERG 495
N+++ L +G A ++ + K G
Sbjct: 1003 NVLITGLCAKGDMAIAFELFEEMKRDG 1029
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 170/387 (43%), Gaps = 20/387 (5%)
Query: 104 EIMKERNVCPNEAT-VRSLVHGVFR-CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
I+KE ++ +++ V + +R C F++LIR RE + Q
Sbjct: 93 HILKELSLMSGKSSFVFGALMATYRLCNSNPSVFDILIRVYLREGMIQ------------ 140
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
++ I R MG G+ P T + + +V + L +KR + P +
Sbjct: 141 ------DSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVA 194
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
T+ +L+ L G + + + K + +YN V+ +CK A E+ M
Sbjct: 195 TFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 254
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+ + ++ T+N LI C+ K LL + + P++ T+N++++ +
Sbjct: 255 NLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKV 314
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
A L+EM+ +G+ PN +T+N LI + G+ +L++F M+A + ++ L
Sbjct: 315 LIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVL 374
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
+ C+ + + A + M G+ +Y+ +I L K+G DEA M ++G
Sbjct: 375 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGI 434
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIV 488
+PD T + ++ + GR + A +IV
Sbjct: 435 DPDIVTYSALINGFCRVGRLKTAKEIV 461
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 178/429 (41%), Gaps = 36/429 (8%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
T + N +I A+ KS ++D A F +M PD FTY LI G+CR G A+ K
Sbjct: 613 TVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAK 672
Query: 70 ------------------------------------QMEGLGYAPNVYTYTILIDGFCNA 93
QM+ LG +V T +IDG+
Sbjct: 673 EAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRM 732
Query: 94 KRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC 153
++ + +L M +N PN T L+HG + +F L + L KL C
Sbjct: 733 GKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTC 792
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
+++ + ++M IL+ RG + TF+ ++ ++N +++
Sbjct: 793 YSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTS 852
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G+ +T ++ L + R E L+ + K + Y +++ C+V +
Sbjct: 853 LGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKT 912
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + EM I P V + ++ K + + LL +L+ P +F +++
Sbjct: 913 AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMH 972
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
C+ +AL+ M G+ + ++YN+LI LCA GD+A + LF++M+ D
Sbjct: 973 LFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLA 1032
Query: 394 DIYTFNALI 402
++ T+ AL+
Sbjct: 1033 NVTTYKALV 1041
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 140/329 (42%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG++ NA+ID + I+ + +M P+ TYNIL+HG + V
Sbjct: 713 LGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVST 772
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ L + M G P+ T +I G C + + ++L+ R V + T L+
Sbjct: 773 SFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLIS 832
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + AF+++ K C+ ++ L+ N E+ +L +M +G P
Sbjct: 833 KCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISP 892
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
ES + + L D+ + + I + P ++ AL K G+ E L
Sbjct: 893 ESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLL 952
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ K +LV + S+ ++ FCK + A E+ M + + +LV++N LI+G C
Sbjct: 953 RSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAK 1012
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMI 332
++ EL + GF + T+ +++
Sbjct: 1013 GDMAIAFELFEEMKRDGFLANVTTYKALV 1041
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 55/121 (45%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P +A++ AL K D A L + M + P ++ L+H C+ G V EAL
Sbjct: 925 ICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEAL 984
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L M G ++ +Y +LI G C +A F + E MK N T ++LV G+
Sbjct: 985 ELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGI 1044
Query: 126 F 126
Sbjct: 1045 L 1045
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 94/236 (39%), Gaps = 2/236 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ +N +I + I+ A+ M+ D+ T + ++ + R E+
Sbjct: 819 GVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQES 878
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +M G +P Y L++G C + F V E M +CP ++V
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ +C +A LL+R M + L + TL++ N +EA + M + G
Sbjct: 939 LAKCGKADEA-SLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKL 997
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
+ +++ +T L D+ + + + G +TY L+ + G + G
Sbjct: 998 DLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSG 1053
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 232/504 (46%), Gaps = 51/504 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ YN +I+ L K D ++ + +M ++ D +TY+ LIHG+C G +D A
Sbjct: 226 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGAT 285
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
R+ K+M G +P+V Y +++G+ A R+ E + ++M E+ C + L+ G+
Sbjct: 286 RVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM-EKEGCRTVVSYNILIRGL 344
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD-RGYLPE 184
F +A + E++ + L++ L N ++A +IL + + RG L
Sbjct: 345 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL-- 402
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
TF Y+ ++ GL L+E G+LD K G KP
Sbjct: 403 -DTFAYS--SMINGLCREGRLDEVAGVLDQMTKHGCKP---------------------- 437
Query: 241 RYLNHVFKDRLVSNVNSY--NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
N Y N VI+ F + + ++ A M + P +VT+NTLI+
Sbjct: 438 ---------------NPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLIN 482
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G K + L+ +L+ G+KP+ T++ +++ LC+ + + AL+ + +E G P
Sbjct: 483 GLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKP 542
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ +NI+I LC+ G V +L+L+ +M+ P++ T N L++ F ++ E+A K +
Sbjct: 543 DVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIW 602
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET-LVQ 477
+L GL+PD SY+ +K L R +A G P + T N++++ L
Sbjct: 603 DHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLAL 662
Query: 478 QGRFEEAHDIVKTSKERGISFKSF 501
+G E G+ + F
Sbjct: 663 KGYMEPVFVPASMKGNPGMQMRYF 686
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 224/499 (44%), Gaps = 16/499 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLA---YLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
G P R YN++++AL++SN D A +L F+ M + P+ TYNILI CR
Sbjct: 83 FGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLS---PNLQTYNILIKISCRKKQ 139
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
D+A L+ M G G++P+V++Y LI+ +++ ++ + M ER V P+ A
Sbjct: 140 FDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNI 199
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDR 179
L+ G F+ D A E+ R ++ + + N ++ L E+ I +M
Sbjct: 200 LIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKN 259
Query: 180 GYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
E YT + L+ GL +L+ + + GV P Y ++ +AGR
Sbjct: 260 ----ERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 315
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
+E L V + V SYN++I + +D A I + ++D + +T+
Sbjct: 316 -IEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGV 374
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
L+ G CK+ ++K +L D F ++SMI+ LCR R ++ L +M + G
Sbjct: 375 LVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 434
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
PN N +I + +LR F M + P + T+N LI + + +A
Sbjct: 435 CKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAY 494
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
ML G +P+ +YS L+ L + + D A + + G PD N+I+ L
Sbjct: 495 ALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGL 554
Query: 476 VQQGRFEEAHDIVKTSKER 494
G+ E+A + K+R
Sbjct: 555 CSSGKVEDALQLYSEMKQR 573
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 225/485 (46%), Gaps = 2/485 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP+ + YN +I + D A M PD F+Y LI+ + + G + +
Sbjct: 118 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSD 177
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE-IMKERNVCPNEATVRSLV 122
AL+L +M G P+V Y ILIDGF + + E ++K +V PN + ++
Sbjct: 178 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 237
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G+ +C ++FE+ R + E +TL++ L + A + ++M + G
Sbjct: 238 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 297
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ ++ + + + E + K G + S Y +L+ L++ + E
Sbjct: 298 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS-YNILIRGLFENAKVDEAISI 356
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + ++ +Y +++ CK +++A I E + + ++++I+G C+
Sbjct: 357 WELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCR 416
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + +L + + G KP+ + N++I+ RA + EDAL MV G P +T
Sbjct: 417 EGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVT 476
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN LI L + + L ++M P++ T++ L+ C+ K++ A + L
Sbjct: 477 YNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQAL 536
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G +PD ++ +I L SG+ ++A Q + M+Q C P+ T N ++E + FE
Sbjct: 537 EKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFE 596
Query: 483 EAHDI 487
A I
Sbjct: 597 RASKI 601
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 215/453 (47%), Gaps = 5/453 (1%)
Query: 46 FTYNILIHGICRIGVVDEALRLVKQM-EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE 104
F ++ H + + D+AL + ++M E G P + +Y L++ + + E
Sbjct: 54 FDPKLVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFL 113
Query: 105 IMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNN 163
+ + PN T L+ R KA ELL +M + + + TL+ L+ N
Sbjct: 114 YFETMGLSPNLQTYNILIKISCRKKQFDKAKELL-NWMWGQGFSPDVFSYGTLINSLAKN 172
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR-GVKPRFST 222
S+A + +M +RG P+ + ++ + D+ I + +K V P +
Sbjct: 173 GYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPS 232
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y +++ L K G+ E + + K+ ++ +Y+ +I C +D AT + +EM
Sbjct: 233 YNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMA 292
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+ ++P++V +NT+++G+ + + + EL ++ + G + ++N +I L + +
Sbjct: 293 ENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVD 351
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+A+ + E +++TY +L+ LC G + ++L + ++ + R D + ++++I
Sbjct: 352 EAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMI 411
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
CR ++++ M G +P+ + +A+I +++ + ++A + F +M GC
Sbjct: 412 NGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCF 471
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
P T N ++ L + RF EA+ +VK ++G
Sbjct: 472 PTVVTYNTLINGLSKAERFSEAYALVKEMLQKG 504
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 119/240 (49%), Gaps = 2/240 (0%)
Query: 260 MVIDCFCKVNMMDRATEICREMRD-RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
+V + K +M D+A +I + M + P + ++N+L++ + + + +
Sbjct: 58 LVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 117
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
G P+ T+N +I CR +F+ A + L+ M G P+ +Y LI SL G ++
Sbjct: 118 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSD 177
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT-LGLRPDNFSYSALI 437
+L+LF +M ++PD+ +N LI F + I A + + +L + P+ SY+ +I
Sbjct: 178 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 237
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
L K G+FDE+ + + M++N D YT + ++ L G + A + K E G+S
Sbjct: 238 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 297
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 56/120 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P +++N +I L S ++ A + +M C P+ T+N L+ G ++ + A
Sbjct: 539 GFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERA 598
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ + G P++ +Y I + G C+ R+++ L +R V P T LV G
Sbjct: 599 SKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQG 658
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 230/483 (47%), Gaps = 11/483 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKP-DRFTYNILIHGICRIGVVD 62
G++PS + +N V+ L KS + A F+ +V + P T++ILI+G+ + G++
Sbjct: 184 FGVAPSLKTHNLVLHGLCKSGKVLAAMDHFE--AVRRSMPVSAATFSILINGLVKAGMMI 241
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+A L ++ G +++TYT +++ K++ E ++E + P AT +L+
Sbjct: 242 QAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALL 301
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G+ + +A +LL + ++ + +L+ L + EA + ++M RG
Sbjct: 302 NGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLA 361
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
++ + + L+ + + + T G P T +++ L KAGR R
Sbjct: 362 LDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRI 421
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ L N Y+ +I CK MD A E+ +M+ P+ +T+N LI G CK
Sbjct: 422 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 481
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+V R +LE G KPD +T+N +I LC+A + A L +M +
Sbjct: 482 SGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM-----SSSRFV 536
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y+ L+ LC G + LF +M+ ++ + T LI C+ N++++A F ++
Sbjct: 537 YSSLVDGLCKSGKLEGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIR 595
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G+ P ++Y+++I ALIKSG+ +E + + M + PD T N +L ++ R +
Sbjct: 596 KEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEMTR-WWKPDRVTYNALLNGMIGANRMD 653
Query: 483 EAH 485
AH
Sbjct: 654 RAH 656
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 134/520 (25%), Positives = 225/520 (43%), Gaps = 47/520 (9%)
Query: 18 DALVKS----NSIDLAYLKFQQMSVDQC--KPDRFTYNILIHGICRIGVVDEALRLVKQM 71
DA+VK DLA+ FQ +S + + T N L+ R EA L+K
Sbjct: 86 DAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNE 145
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER-NVCPNEATVRSLVHG------ 124
+ P+V T+ +LI G+C A+ E F V+ M+E V P+ T ++HG
Sbjct: 146 LATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGK 205
Query: 125 VFRCLDPHKA-----------FELLIR-------FMEREPLTQKLVCN----------TL 156
V +D +A F +LI ++ L Q+ N +
Sbjct: 206 VLAAMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAI 265
Query: 157 LYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
+ L+ N EA A++ K+ G P +T++ + L L E +L + G
Sbjct: 266 VNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 325
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
P TY L++ L K R E + + L + Y +I + + +A+
Sbjct: 326 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASS 385
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
+ + M P++VT +T+I G K + + + G P++ ++++I LC
Sbjct: 386 VYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 445
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
+A + + AL+ L++M + P+TITYNILI LC GDV + F +M PD+Y
Sbjct: 446 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 505
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
T+N LI C+ + A M + F YS+L+ L KSG+ + F M
Sbjct: 506 TYNILISGLCKAGNTDAACGVLDDMSS-----SRFVYSSLVDGLCKSGKLEGGCMLFHEM 560
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
E++G +S T ++ L + R +EA + ++ G+
Sbjct: 561 ERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM 599
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 148/321 (46%), Gaps = 41/321 (12%)
Query: 218 PRFS------TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
PRF T L++ + R E L + +V ++N++I +C
Sbjct: 111 PRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREP 170
Query: 272 DRATEICREMR-DRDIAPNLVTFNTLISGHCKDAEV-----------------HKTRELL 313
+ A + REM D +AP+L T N ++ G CK +V T +L
Sbjct: 171 EEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSIL 230
Query: 314 V-------MLLEC----------GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ M+++ G D T+ ++++ L + + ++A+ + ++ G
Sbjct: 231 INGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGC 290
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
P TYN L+ LC +G + ++ L +K+ + +PD+ T+ +LI + + +A K
Sbjct: 291 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYK 350
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
F M + GL D Y+ALI+ L+++G+ +A + +M +GC PD T + +++ L
Sbjct: 351 LFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLS 410
Query: 477 QQGRFEEAHDIVKTSKERGIS 497
+ GR A I K+ + RG++
Sbjct: 411 KAGRIGAAVRIFKSMEARGLA 431
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 120/299 (40%), Gaps = 43/299 (14%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ +Y+A+I L K+ +D A QM C PD TYNILI G+C+ G V+ A
Sbjct: 429 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAA 488
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+M G P+VYTY ILI G C A VL+ M SLV G
Sbjct: 489 RAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRF-----VYSSLVDG 543
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +L MER + L++ L + EA ++ + G +P
Sbjct: 544 LCKSGKLEGGC-MLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPH 601
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ ++ L+ +NE +A+Y+ E R+
Sbjct: 602 PYAYNSIISALIKSGKVNEG-----------------------QAVYQ-----EMTRWWK 633
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
DR+ +YN +++ N MDRA EM R P + + L KD
Sbjct: 634 ---PDRV-----TYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPVSILHKLADDRLKD 684
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 3/129 (2%)
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRIS--PDIYTFNALIQSFCRMNKIEKAEKAF 418
I+ + +++ + D + LFQ + + R ++T NAL+ F R + +A
Sbjct: 83 ISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLL 142
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN-GCNPDSYTSNLILETLVQ 477
+ L RPD +++ LI + +EA ME++ G P T NL+L L +
Sbjct: 143 KNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCK 202
Query: 478 QGRFEEAHD 486
G+ A D
Sbjct: 203 SGKVLAAMD 211
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 227/486 (46%), Gaps = 36/486 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P L +I S +I A + ++ KPD F YN LI G + ++ A
Sbjct: 99 GYTPDVILCTKLIKGFFNSRNIGKA-TRVMEILERYGKPDVFAYNALISGFIKANQLENA 157
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++ +M+ G+ P+V TY I+I FC+ ++ + E + + N P T L+
Sbjct: 158 NRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEA 217
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
T+L + A +L +M +G P+
Sbjct: 218 ------------------------------TIL-----DGGIDVAMKLLDEMLSKGLEPD 242
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + + + +++ +L + RG KP TY +L+ L G+ EG++ ++
Sbjct: 243 TLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLIS 302
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ NV +++++I C+ ++ A + R M+++ + P+ ++ LI+G C++
Sbjct: 303 EMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREG 362
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ E L ++ G PD +N+++ LCR + + AL+ ++ E G PPN +YN
Sbjct: 363 RLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYN 422
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L +L + GD R+L + K+ I PD T+N+LI CR +++A + M +
Sbjct: 423 TLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSG 482
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
RP+ SY+ ++ L K R ++A + +M + GC P+ T L++E + G EA
Sbjct: 483 RYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEA 542
Query: 485 HDIVKT 490
++ +
Sbjct: 543 MELANS 548
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 211/481 (43%), Gaps = 73/481 (15%)
Query: 51 LIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
L++ CR G +E+L ++ M GY P+V T LI GF N++ + + RV+EI+ ER
Sbjct: 75 LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEIL-ERY 133
Query: 111 VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA 170
P+ +L+ G KA +L A
Sbjct: 134 GKPDVFAYNALISGFI------KANQL-----------------------------ENAN 158
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEA- 229
+L +M RG+LP+ T++ + + L+ I + +K +P TY +L+EA
Sbjct: 159 RVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEAT 218
Query: 230 LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
+ G DV + L+ + L + +YN +I CK M+D+A E+ R + R P+
Sbjct: 219 ILDGGIDV-AMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPD 277
Query: 290 LVTFNTL-----------------------------------ISGHCKDAEVHKTRELLV 314
++T+N L I C+D +V + LL
Sbjct: 278 IITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLR 337
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
+ E G KPD + ++ +I CR R + A + L M+ G P+ + YN ++ LC G
Sbjct: 338 SMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTG 397
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
++L +F+K+ P++ ++N L + +A + +L G+ PD +Y+
Sbjct: 398 KADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYN 457
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
+LI L + G DEA + + M+ P+ + N+IL L + R +A +++ E+
Sbjct: 458 SLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEK 517
Query: 495 G 495
G
Sbjct: 518 G 518
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 119/262 (45%), Gaps = 1/262 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P+ ++ +I L + ++ A + M KPD + Y+ LI G CR G +D
Sbjct: 307 IGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDL 366
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ M G P++ Y ++ G C + + V E + E PN ++ +L
Sbjct: 367 ATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFS 426
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
++ D ++A E++++ + + ++ N+L+ L + M EA +L M Y P
Sbjct: 427 ALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRP 486
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+++ + L N+ +L ++G +P +TY+LL+E + +G E
Sbjct: 487 NVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELA 546
Query: 244 NHVFKDRLVSNVNSYNMVIDCF 265
N + +S +S+N + F
Sbjct: 547 NSLHGMNAISE-DSFNRLNKTF 567
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 209/461 (45%), Gaps = 38/461 (8%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
C+PD YN ++ G C G +D A RLV M P+ YTY LI G C R
Sbjct: 120 CEPDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNAL 176
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
VL+ M R P+ T L+ C Y+
Sbjct: 177 VVLDDMLRRGCVPDVVTYTILLEAT---------------------------CKRSGYK- 208
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
+A +L +M +G P+ T++ V + +++ L + G +P
Sbjct: 209 -------QAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNT 261
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
+Y ++++ L A R + ++ + + + NV ++NM+I C+ +++ A E+ +
Sbjct: 262 VSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQ 321
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
+ PN +++N ++ CK ++ + + +++ G PD ++N+++ LCR
Sbjct: 322 IPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGE 381
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
+ A++ L ++ + G P I+YN +I L G +L L +M + PDI T++
Sbjct: 382 VDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYST 441
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
+ CR ++IE+A +AF + +G+RP+ Y+A++ L K A F+ M NG
Sbjct: 442 ISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNG 501
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
C P+ T +++E L +G +EA +++ RG+ K
Sbjct: 502 CMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKGL 542
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 197/433 (45%), Gaps = 3/433 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YNA++ + +D A M ++ PD +TYN LI G+C G AL +
Sbjct: 122 PDVMAYNAMVAGYCVTGQLDAARRLVADMPME---PDSYTYNTLIRGLCGRGRTGNALVV 178
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ M G P+V TYTIL++ C + ++L+ M+ + P+ T +V+G+ +
Sbjct: 179 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQ 238
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
A E L + N +L L +A ++ +M +GY P T
Sbjct: 239 EGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVT 298
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
F+ ++ L + +LD K G P +Y ++ A K + ++ +
Sbjct: 299 FNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV 358
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
++ SYN ++ C+ +D A E+ +++D+ P L+++NT+I G K +
Sbjct: 359 SRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTK 418
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ ELL ++ G +PD T++++ LCR R E+A+ ++ + G+ PNT+ YN ++
Sbjct: 419 EALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAIL 478
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC + ++ LF M ++ P+ T+ LI+ +++A + + + G+
Sbjct: 479 LGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVV 538
Query: 428 PDNFSYSALIKAL 440
A I+ L
Sbjct: 539 SKGLINKAAIRLL 551
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 170/383 (44%), Gaps = 37/383 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y +++A K + A +M C PD TYN++++GIC+ G VD+A
Sbjct: 186 GCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDA 245
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +K + G PN +Y I++ G C A+R + +++ M ++ PN T
Sbjct: 246 IEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVT------- 298
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F +LI F+ R L + A +L ++ G P
Sbjct: 299 ----------FNMLISFLCRRGLVEP------------------AMEVLDQIPKYGCTPN 330
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S +++ + ++ ++ + RG P +Y L+ AL + G +V+ L
Sbjct: 331 SLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGG-EVDAAVELL 389
Query: 245 HVFKDRLVSNV-NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
H KD+ + V SYN VID K A E+ EM + + P+++T++T+ SG C++
Sbjct: 390 HQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCRE 449
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + + + G +P+ +N+++ LC+ +A+D M+ G PN TY
Sbjct: 450 DRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTY 509
Query: 364 NILIRSLCAIGDVARSLRLFQKM 386
ILI L G V + L ++
Sbjct: 510 TILIEGLTYEGLVKEARELLGEL 532
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/516 (25%), Positives = 235/516 (45%), Gaps = 56/516 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T Y+ VI L + ++ A+L FQ+M + PD +TY ILI C+ G++++A
Sbjct: 283 GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQA 342
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++M +G +P V TYT LI + AK+V + + M + PN+ T +LV G
Sbjct: 343 QWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDG 402
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL-P 183
+ + + KAFE+ + + + S + DR L P
Sbjct: 403 LCKAGNISKAFEVYAKLI--------------------GTSDSADSDFYFPCEDRHTLAP 442
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ V L ++ +LD + G +P Y L++ KAG+
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ K + +V++Y +ID K +D A ++ +M PN+VT+ +I G C+
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E K +LL ++ E G P+ T+ ++ID L +A + + +LD ++M G PN +TY
Sbjct: 563 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 622
Query: 364 NILIRSLCAIG--DVAR-------------------------------SLRLFQKMQADR 390
+LI LCA G D AR SL + ++M++
Sbjct: 623 RVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYG 682
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL--GLRPDNFSYSALIKALIKSGRFDE 448
P + LI F + ++E A + M+ + ++ DN Y++LI+AL + + +E
Sbjct: 683 TVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEE 742
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
A + + M + G P+ +++ LV+ +++EA
Sbjct: 743 AFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 778
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 144/615 (23%), Positives = 254/615 (41%), Gaps = 126/615 (20%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG---- 59
G PS YNA++ L + +DL + ++MS DRFT H +C+ G
Sbjct: 34 FGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWAD 93
Query: 60 ----------------------------VVDEALRLVKQMEGLGYAPNVYTYTILIDGFC 91
DEA+ + +M PNV TY L+ GF
Sbjct: 94 ALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFL 153
Query: 92 NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF---------- 141
K++ R++ +M PN + SLVH D A++LL R
Sbjct: 154 KKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYV 213
Query: 142 -----------MEREP------LTQK-----LVCNTLLYRLSNNSMA---------SEAA 170
E+ P L +K L N +L +++ + A +A
Sbjct: 214 VYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAF 273
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
++++M +G++P++ST+ +T L + + + GV P TY +L+++
Sbjct: 274 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 333
Query: 231 YKAGRDVEGDRYL--------------------NHVFKDRLVSNVN-------------- 256
KAG +E ++L + K + V N
Sbjct: 334 CKAGL-IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 392
Query: 257 --SYNMVIDCFCKVNMMDRATEICREM---------------RDRD-IAPNLVTFNTLIS 298
+Y ++D CK + +A E+ ++ DR +APN+VT+ L+
Sbjct: 393 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 452
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G CK +V ELL +L G +P+ ++++ID C+A + + A + +M + G P
Sbjct: 453 GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLP 512
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ TY LI + G + ++++ +M D +P++ T+ A+I CR+ + EKA K
Sbjct: 513 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLL 572
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M G P+ +Y+ALI L K+G+ D + F M + GC+P+ T +++ L
Sbjct: 573 SLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAA 632
Query: 479 GRFEEAHDIVKTSKE 493
G ++A ++ K+
Sbjct: 633 GLLDKARLLLGEMKQ 647
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 118/463 (25%), Positives = 204/463 (44%), Gaps = 29/463 (6%)
Query: 5 GISPSTRLYNAVI------DALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRI 58
G P +YN I + L + +DLA + +M C ++ +C +
Sbjct: 207 GCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGV 266
Query: 59 GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
G D+A +L+K+M G+ P+ TY+ +I C+A +V + F + + MK V P+ T
Sbjct: 267 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 326
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMG 177
L+ + +A + L M + +V T L++ +A I +M
Sbjct: 327 TILIDSFCKAGLIEQA-QWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV 385
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRG-VKPRFSTYLLLMEALYKAGRD 236
D G P T+ ++D K G + F Y L+
Sbjct: 386 DAGCRPNDVTYG----------------ALVDGLCKAGNISKAFEVYAKLI----GTSDS 425
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
+ D Y + L NV +Y ++D CK + +D A E+ M PN + ++ L
Sbjct: 426 ADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDAL 485
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
I G CK ++ +E+ + + +CG+ P T+ S+ID + + R + A+ LS+M++
Sbjct: 486 IDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSC 545
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
PN +TY +I LC IG+ ++L+L M+ SP++ T+ ALI + KI+ +
Sbjct: 546 TPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLD 605
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
F M G P+ +Y LI L +G D+A+ M+Q
Sbjct: 606 LFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 648
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 190/448 (42%), Gaps = 27/448 (6%)
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
++ GY P+ TY L+ +A +V FRV + M E C + TV H + C +
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHAL--CKE 88
Query: 131 PHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
A L +ERE ++C ++ L S EA + L +M +P T+
Sbjct: 89 GRWADAL--DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYR 146
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
++ + L I++ + G P S + L+ + + LN +
Sbjct: 147 TLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTC 206
Query: 250 RLVSNVNSYNMVIDCFC------KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
YN+ I C +++D A +I EM + N V C
Sbjct: 207 GCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGV 266
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ K +L+ ++ GF PD T++ +I LC A + E A EM GV P+ TY
Sbjct: 267 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 326
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
ILI S C G + ++ LF++M++ SP + T+ ALI ++ + ++ +A F M+
Sbjct: 327 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 386
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM----------------EQNGCNPDSYT 467
G RP++ +Y AL+ L K+G +A + + + +++ P+ T
Sbjct: 387 AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT 446
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERG 495
+++ L + + + AH+++ G
Sbjct: 447 YGALVDGLCKAHKVDHAHELLDAMLSSG 474
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/581 (22%), Positives = 247/581 (42%), Gaps = 93/581 (16%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFT-------------------- 47
PS YN +I A +K++ +D A L ++MS+ + D FT
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 48 ------------YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR 95
Y LI G+C + +EA+ + +M PNV TY+ L+ G N K+
Sbjct: 293 VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQ 352
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME------------ 143
+ RVL +M P+ SLVH D A++LL + ++
Sbjct: 353 LGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNI 412
Query: 144 --------------------REPLTQKLVCNTLLYRLSNNSMA---------SEAAAILR 174
+ ++ L +L +++ +S +A +++R
Sbjct: 413 LIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIR 472
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
+M +G++P++ST+ + L + + + + G+ TY +++++ KAG
Sbjct: 473 EMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 532
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
+ ++ N + + NV +Y +I + K + A E+ M PN+VT++
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFK------------------PDKFTFNSMIDCLC 336
LI GHCK +V K ++ + CG K P+ T+ +++D C
Sbjct: 593 ALIDGHCKAGQVEKACQIFERM--CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 650
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
++HR E+A L M G PN I Y+ LI LC +G + + + +M +Y
Sbjct: 651 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 710
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
T+++LI + ++ + + A K ML P+ Y+ +I L K G+ DEA + M
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
E+ GC P+ T +++ G+ E ++++ +G++
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 811
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/515 (23%), Positives = 221/515 (42%), Gaps = 54/515 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T Y+ V++ L ++ ++LA+L F++M D +TY I++ C+ G++++A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M +G PNV TYT LI + AK+V+ + E M PN T +L+ G
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KA ++ R+ + + ++ D P
Sbjct: 598 HCKAGQVEKACQIF-------------------ERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + + E +LD G +P Y L++ L K G+ E
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + + +Y+ +ID + KV D A+++ +M + APN+V + +I G CK
Sbjct: 699 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + +L+ M+ E G +P+ T+ +MID + E L+ L M GV PN +TY
Sbjct: 759 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 818
Query: 365 ILIRSLCAIG--DVAR-------------------------------SLRLFQKMQADRI 391
+LI C G DVA SL L ++ D
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDT 878
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS--YSALIKALIKSGRFDEA 449
+P + + LI + + ++E A + + T ++S Y++LI++L + + + A
Sbjct: 879 APFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETA 938
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
Q F M + G P+ + +++ L + + EA
Sbjct: 939 FQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 203/478 (42%), Gaps = 24/478 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGIC------RI 58
G PS +++N+++ A S AY ++M P YNILI IC
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 59 GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
++D A + +M G N + C+A + + F V+ M + P+ +T
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMG 177
+++ + AF LL M+R L + T++ + +A +M
Sbjct: 487 SKVLNYLCNASKMELAF-LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG--- 234
+ G P T+ + + ++ + +T + G P TY L++ KAG
Sbjct: 546 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 605
Query: 235 ------------RDV-EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+DV + D Y + NV +Y ++D FCK + ++ A ++ M
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
PN + ++ LI G CK ++ + +E+ + E GF +T++S+ID + R
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 725
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+ A LS+M+E PN + Y +I LC +G + +L Q M+ P++ T+ A+
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
I F + KIE + M + G+ P+ +Y LI K+G D A M+Q
Sbjct: 786 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT 843
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/546 (21%), Positives = 217/546 (39%), Gaps = 54/546 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G + +YNA++D +V+ + + QQ+ D + N+L+ CR G
Sbjct: 159 IGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSI 218
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR---------------------------- 95
AL + +++ + P+ TY LI F A R
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 96 ----VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL 151
V + L +++ N P+ L+ G+ +A + L R L +
Sbjct: 279 SLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVV 338
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
+TLL N +L M G P F+ V T D + +L
Sbjct: 339 TYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 398
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGD------RYLNHVFKDRLVSNVNSYNMVIDCF 265
+K G P + Y +L+ ++ + D + + + +V N + + C
Sbjct: 399 VKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCL 458
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C ++A + REM + P+ T++ +++ C +++ L + G D
Sbjct: 459 CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV 518
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
+T+ M+D C+A E A +EM E G PN +TY LI + V+ + LF+
Sbjct: 519 YTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFET 578
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL----------------GLRPD 429
M ++ P+I T++ALI C+ ++EKA + F M RP+
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y AL+ KS R +EA++ +M GC P+ + +++ L + G+ +EA ++
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Query: 490 TSKERG 495
E G
Sbjct: 699 EMSEHG 704
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 199/464 (42%), Gaps = 55/464 (11%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G +P+ Y A+I A +K+ + A F+ M + C P+ TY+ LI G C+ G V++
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 64 ALRLVKQMEGL----------------GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
A ++ ++M G PNV TY L+DGFC + RV E ++L+ M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
PN+ +L+ G+ + +A E+ E ++L+ R
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
A+ +L KM L +C P Y ++
Sbjct: 727 LASKVLSKM------------------------LENSCA-----------PNVVIYTEMI 751
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
+ L K G+ E + + + + NV +Y +ID F + ++ E+ M + +A
Sbjct: 752 DGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 811
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
PN VT+ LI CK+ + LL + + + + +I+ + F ++L
Sbjct: 812 PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGL 869
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY--TFNALIQSF 405
L E+ + P Y +LI +L + +LRL +++ + Y T+N+LI+S
Sbjct: 870 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESL 929
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
C NK+E A + F M G+ P+ S+ +LIK L ++ + EA
Sbjct: 930 CLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 149/343 (43%), Gaps = 39/343 (11%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y A++D KS+ ++ A MS++ C+P++ Y+ LI G+C++G +DEA +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 68 VKQMEGLGY-----------------------------------APNVYTYTILIDGFCN 92
+M G+ APNV YT +IDG C
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
+ E ++++++M+E+ PN T +++ G ELL R + +
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
L+ N A +L +M + ++ + + + E+ G+LD
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIG 874
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV--FKDRLVSNVNSYNMVIDCFCKVNM 270
+ P S Y LL++ L KA R R L V F LV ++YN +I+ C N
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
++ A ++ EM + + P + +F +LI G +++++ + LL
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 103/247 (41%), Gaps = 36/247 (14%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ +Y +ID L K D AY Q M C+P+ TY +I G IG ++ L
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG-- 124
L+++M G APN TY +LID C + +LE MK+ + + A R ++ G
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFN 860
Query: 125 -----------------------VFRCLDPH----KAFELLIRFMER-EPLTQKLV---- 152
V+R L + + E+ +R +E + LV
Sbjct: 861 KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSS 920
Query: 153 -CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
N+L+ L + A + +M +G +PE +F + L ++E +LD F
Sbjct: 921 TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD-F 979
Query: 212 IKRGVKP 218
I V P
Sbjct: 980 ISHMVCP 986
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
+ G+K +N+++D + R + + L ++ + N+L+R C G +
Sbjct: 158 QIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFS 217
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+L +++ R P T+N LIQ+F + ++++ A M LR D F+
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFA 277
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+L K G++ EA +E PD+ ++ L + FEEA D +
Sbjct: 278 YSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFL 325
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/498 (24%), Positives = 220/498 (44%), Gaps = 8/498 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T YN+++ K+ A ++M + C+PD TYN L+ R G DE
Sbjct: 338 GYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEG 397
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ M G PN TYT +I+ + A + V MKE PN T +
Sbjct: 398 AAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNN---- 453
Query: 125 VFRCLDPHKAFELLIRFMEREPLT----QKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
V L E +I+ + L ++ NT+L + +LR+M + G
Sbjct: 454 VLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCG 513
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ P+ TF+ ++ + + + G P +TY L+ AL + G +
Sbjct: 514 FEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAE 573
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + K N SY++++ C+ K + ++ E+ D + P+ + TL+ +
Sbjct: 574 SVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTN 633
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K ++ L G+K D NSM+ R + E A + L + G+ PN
Sbjct: 634 YKCRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNL 693
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TYN LI +GD ++ + + +Q ISPD+ ++N +I+ FC+ +++A +
Sbjct: 694 VTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSE 753
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G++P +++ + +G F EA + M ++GC P+ T ++++ ++ +
Sbjct: 754 MTANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKK 813
Query: 481 FEEAHDIVKTSKERGISF 498
+EA D V KE ISF
Sbjct: 814 HKEAMDFVSKIKEIDISF 831
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/484 (21%), Positives = 211/484 (43%), Gaps = 5/484 (1%)
Query: 16 VIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLG 75
++ L + + +A F + V++ D ++H R G A+ + ++M+ G
Sbjct: 208 MVKMLGRESQYSIASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETG 267
Query: 76 YAPNVYTYTILIDGFCNAKRV-AEVFRVLEIMKERNVCPNEATVRSLVHGVFR--CLDPH 132
P + TY +++D + R + + +L+ M+ + + +E T +++ R LD
Sbjct: 268 LDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEA 327
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+ F ++ +P T N++L + +EA IL++M D P++ T++ V
Sbjct: 328 RRFFDDLKLNGYKPGTATY--NSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELV 385
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
V +E ++DT +GV P TY ++ A KAG + + + V
Sbjct: 386 AAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCV 445
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
NV +YN V+ K + + +I +M+ P+ +T+NT+++ + + ++
Sbjct: 446 PNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQV 505
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L + CGF+PDK TFN++I R D EMV G P TYN L+ +L
Sbjct: 506 LREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALAR 565
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G+ + + M+ P+ +++ L+ + + + EK + + P
Sbjct: 566 RGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWML 625
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
L+ K + ++ F ++ NG D N +L V+ + E+AH+++
Sbjct: 626 LRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIH 685
Query: 493 ERGI 496
G+
Sbjct: 686 VSGL 689
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/511 (24%), Positives = 240/511 (46%), Gaps = 26/511 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ +YNA+ID ++LA F++M V+ C P+ TY LI G C+ +D A
Sbjct: 207 GFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRA 266
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +M G PNV TYT LI G C+ ++ +R+L+ M+ + PNE T L+
Sbjct: 267 MMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDA 326
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A LL +++ ++V +L+ L + A +++ + +G++P+
Sbjct: 327 LCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPD 386
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD---R 241
+ T+ + L +L+E +LD +++GV+P TY ++++ L R+V D +
Sbjct: 387 AHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELV---REVGADGSKK 443
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L+ + + +V +Y + + +C M+ A + M D + PNLVT+N LI G+
Sbjct: 444 ILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYA 503
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH------------------RFED 343
+ ++ G KP++ ++ ++ L + ++
Sbjct: 504 NLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLH 563
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
L L EMV+ +P YN + SLC + + + L +MQ+ ++P + ++I
Sbjct: 564 GL--LEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIA 621
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
CR+ + +A SM+ G P SY +I +L + G AKQ F M N
Sbjct: 622 CCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNY 681
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
+ ++++ L+Q+G E ++ +E+
Sbjct: 682 EEIAWRILIDGLLQKGYVAECSSLLSVMEEK 712
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 124/468 (26%), Positives = 202/468 (43%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
R Y +I+A + + + + PD Y + G CR G++ A RL
Sbjct: 73 RTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVL 132
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M G +TYT L+ G C A V E V M+ P+ ++VHG+
Sbjct: 133 MPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGR 192
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A LL M +V N L+ N A + +M G P T+
Sbjct: 193 TREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTE 252
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
++ L+ + + G+ P TY L++ G+ R L +
Sbjct: 253 LISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSG 312
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
LV N + +++ID CK + A + + + I N + + +LI G CK
Sbjct: 313 LVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAAD 372
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
L+ L+ GF PD T++S+ID LCR +A+ L +M+E GV P+ +TY I+I L
Sbjct: 373 RLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDEL 432
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
S ++ KM A I PD++T+ ++S+C ++E AE M+ G+ P+
Sbjct: 433 VREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNL 492
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+Y+ALI G +A TF M NGC P+ + ++L L+++
Sbjct: 493 VTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKK 540
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 207/474 (43%), Gaps = 18/474 (3%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y A++ L + + A F M D C PD Y ++HG+C G EA L+
Sbjct: 145 YTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAM 204
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G+ PNV Y LIDG+CN + V E M PN T L+ G +
Sbjct: 205 AEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLD 264
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A L R ++ + + L+ ++ A +L+ M + G +P T +
Sbjct: 265 RAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLI 324
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L + E +L + I++G+K Y L++ L KAGR DR + + V
Sbjct: 325 DALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFV 384
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+ ++Y+ +ID C+ + A + +M ++ + P+ VT+ +I ++ ++++
Sbjct: 385 PDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKI 444
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L ++ G KPD FT+ + C R EDA + MV+ GV PN +TYN LI
Sbjct: 445 LDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYAN 504
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQ----------------SFCRMNKIEKAEK 416
+G +++ F+ M A+ P+ ++ L++ S ++ +++
Sbjct: 505 LGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHG 564
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP--DSYTS 468
M+ L L + Y+ + +L + R DEAK + M+ P D YTS
Sbjct: 565 LLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTS 618
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 194/454 (42%), Gaps = 43/454 (9%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
TY LI+ C G + + R + + G+AP+ + YT + G+C A +A R+ +M
Sbjct: 74 TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
R T +L+HG L M
Sbjct: 134 PLRGCVRTAFTYTALLHG-----------------------------------LCGAGMV 158
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
EA ++ M G P+ + V L E +L + G +P Y L
Sbjct: 159 REAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNAL 218
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVS----NVNSYNMVIDCFCKVNMMDRATEICREMR 282
++ G D+E VF+ V+ NV +Y +I FCK +DRA + M
Sbjct: 219 IDGYCNVG-DLE---LAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMV 274
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
D + PN+VT+ LI G C D ++ LL + G P+++T + +ID LC+ R
Sbjct: 275 DAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVG 334
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+A L +++ G+ N I Y LI LC G A + RL Q + + PD +T+++LI
Sbjct: 335 EAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLI 394
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
CR ++ +A M+ G++P +Y+ +I L++ D +K+ M G
Sbjct: 395 DGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIK 454
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
PD +T + + + +GR E+A ++ + G+
Sbjct: 455 PDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGV 488
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/495 (22%), Positives = 195/495 (39%), Gaps = 51/495 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP+ R Y +I KS +D A + F +M P+ TY LI G C G +D A
Sbjct: 242 GCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCA 301
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL++ ME G PN +T ++LID C +RV E +L + ++ + NE SL+ G
Sbjct: 302 YRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDG 361
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A L+ + + + ++L+ L SEA +L M ++G P
Sbjct: 362 LCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPS 421
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + LV + + + ILD I G+KP TY + + + GR + + +
Sbjct: 422 PVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMML 481
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN--------------- 289
H+ + N+ +YN +I + + + +A + M PN
Sbjct: 482 HMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKE 541
Query: 290 ------------------------------------LVTFNTLISGHCKDAEVHKTRELL 313
+ +N ++ C+ + + + LL
Sbjct: 542 SSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILL 601
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ + P + + S+I C CR +AL + MV+ G P +Y +I SLC
Sbjct: 602 IEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEE 661
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G + + ++F M + + + + LI + + + M RP + Y
Sbjct: 662 GSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALY 721
Query: 434 SALIKALIKSGRFDE 448
+ L + + E
Sbjct: 722 ARLTGKITDANDIQE 736
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 151/382 (39%), Gaps = 29/382 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y+++ID L + + A L M +P TY I+I + R D +
Sbjct: 382 GFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGS 441
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ +M G P+V+TYTI + +C+ R+ + ++ M + VCPN T +L+ G
Sbjct: 442 KKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICG 501
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL-----SNNSMASEAAAILRKMGDR 179
+AF + M T+L RL S+N++ + + +I K+ +
Sbjct: 502 YANLGLTSQAFSTF-KHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIW-KIAEM 559
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
YL G+L+ +K + Y + +L + R E
Sbjct: 560 KYLH----------------------GLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEA 597
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L + L + + Y +I C C++ M+ A M P L ++ +IS
Sbjct: 598 KILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISS 657
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
C++ + +++ +L + ++ + +ID L + + LS M E P+
Sbjct: 658 LCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPS 717
Query: 360 TITYNILIRSLCAIGDVARSLR 381
Y L + D+ R
Sbjct: 718 DALYARLTGKITDANDIQEIAR 739
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 69/171 (40%)
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+ ++I+ C A + LS ++ G P++ Y + C G +A + RLF M
Sbjct: 74 TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+T+ AL+ C + +A F M G PD Y+ ++ L +GR
Sbjct: 134 PLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRT 193
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
EA+ G P+ N +++ G E A D+ + G S
Sbjct: 194 REAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCS 244
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/457 (29%), Positives = 220/457 (48%), Gaps = 40/457 (8%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ V+ + KS + DL F M V D ++YNI+I+ +CR AL +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
V +M GY P+V T + LI+GFC RV + ++ M+E P+ +++ G +
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A EL R MER+ + V N+L+ L + S+AA ++R M R +P
Sbjct: 187 IGLVNDAVELFDR-MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
TF ++D F+K G +FS + L E + + R V+ D
Sbjct: 246 TF----------------TAVIDVFVKEG---KFSEAMKLYEEMTR--RCVDPD------ 278
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
V +YN +I+ C +D A ++ M + P++VT+NTLI+G CK V
Sbjct: 279 --------VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ +L + + G D T+N++I +A R + A + S M PN TY+IL
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSIL 387
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ LC V ++L LF+ MQ I DI T+N +I C++ +E A F S+ GL
Sbjct: 388 LYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL 447
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+PD SY+ +I + ++D++ + M+++G P
Sbjct: 448 KPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 190/424 (44%), Gaps = 38/424 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI YN VI+ L + + +A +M +PD T + LI+G C+ V +A
Sbjct: 99 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ LV +ME +G+ P+V Y +IDG C V + + + M+ V + T SLV G
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 218
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
L C + S+AA ++R M R +P
Sbjct: 219 --------------------------LCC---------SGRWSDAARLMRDMVMRDIVPN 243
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + V +E + + +R V P TY L+ L GR E + L+
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 303
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +V +YN +I+ FCK +D T++ REM R + + +T+NT+I G+ +
Sbjct: 304 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+E+ + +P+ T++ ++ LC R E AL M + + + TYN
Sbjct: 364 RPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+I +C IG+V + LF+ + + PD+ ++ +I FCR + +K++ + M
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 480
Query: 425 GLRP 428
GL P
Sbjct: 481 GLLP 484
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 206/456 (45%), Gaps = 42/456 (9%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P ++ ++ I + D + L ME G ++Y+Y I+I+ C R V
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
+ M + P+ TV SL++G
Sbjct: 127 VGKMMKFGYEPDVVTVSSLING-----------------------------------FCQ 151
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTV--TCLVTGLDLNETCGILDTFIKRGVKPRF 220
+ +A ++ KM + G+ P+ ++ + +C + GL +N+ + D + GV+
Sbjct: 152 GNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKI-GL-VNDAVELFDRMERDGVRADA 209
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY L+ L +GR + R + + +V NV ++ VID F K A ++ E
Sbjct: 210 VTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 269
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M R + P++ T+N+LI+G C V + +++L +++ G PD T+N++I+ C++ R
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
++ EM + G+ +TITYN +I+ G + +F +M + P+I T++
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSI 386
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
L+ C ++EKA F +M + D +Y+ +I + K G ++A F S+ G
Sbjct: 387 LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG 446
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
PD + ++ ++ +++++ + + +E G+
Sbjct: 447 LKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 150/320 (46%), Gaps = 3/320 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P +YN +ID K ++ A F +M D + D TYN L+ G+C G +
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 227
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A RL++ M PNV T+T +ID F + +E ++ E M R V P+ T SL++
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ +A ++L + + L + NTL+ + E + R+M RG +
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ T++ T + + F + +P TY +L+ L R +
Sbjct: 348 DTITYN---TIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
++ K + ++ +YN+VI CK+ ++ A ++ R + + + P++V++ T+ISG C+
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Query: 304 AEVHKTRELLVMLLECGFKP 323
+ K+ L + E G P
Sbjct: 465 RQWDKSDLLYRKMQEDGLLP 484
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 127/250 (50%)
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + R + ++ ++ V+ K D + M I +L ++N +I+ C+ +
Sbjct: 60 MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 119
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
++ +++ G++PD T +S+I+ C+ +R DA+D +S+M E G P+ + YN
Sbjct: 120 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 179
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+I C IG V ++ LF +M+ D + D T+N+L+ C + A + M+
Sbjct: 180 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ P+ +++A+I +K G+F EA + + M + +PD +T N ++ L GR +EA
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 299
Query: 486 DIVKTSKERG 495
++ +G
Sbjct: 300 QMLDLMVTKG 309
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 227/474 (47%), Gaps = 2/474 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ-CKPDRFTYNILIHGICRIGVVDEA 64
++P YN +ID +K +A + ++ D P+ T+NI+I G+ + G VD+
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ +M+ ++YTY+ LI G C+ V + V + ER + T +++ G
Sbjct: 275 LKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGG 334
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
RC ++ EL R ME+ + N L+ L N EA I R M +GY +
Sbjct: 335 FCRCGKIKESLELW-RIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAAD 393
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++T+ + L +N+ G++ +G Y +++ L K R E +
Sbjct: 394 NTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVK 453
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K + N + N +I + + + A+ + R M P +V++N LI G C+
Sbjct: 454 EMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAG 513
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + +LE G KPD T++ ++ LCR + E AL+ + ++ G+ P+ + +N
Sbjct: 514 KFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHN 573
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
ILI LC++G + ++ + M+ + ++ T+N L++ + ++ +A + M +
Sbjct: 574 ILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKM 633
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
GL+PD SY+ ++K L R A + F +G P YT N+++ +V +
Sbjct: 634 GLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVVNR 687
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 217/510 (42%), Gaps = 43/510 (8%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
G P R YN +++A V++ F P+ TYN+LI C+ +
Sbjct: 107 IFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFE 166
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+A + M G+ P+V++Y+ +I+ ++ + + + M ER V P+ L+
Sbjct: 167 KARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILI 226
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G + D A +L + +E + + + ++ +S S L K+ DR
Sbjct: 227 DGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIM--ISGLSKCGRVDDCL-KIWDRMKQ 283
Query: 183 PESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
E YT + L+ GL ++++ + + ++R TY ++ + G+ ++
Sbjct: 284 NEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGK-IK 342
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
L + + R N+ SYN++I + +D AT I R M + A + T+ I
Sbjct: 343 ESLELWRIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIH 402
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP- 357
G C + V+K ++ + G D + + S+IDCLC+ R E+A + + EM + GV
Sbjct: 403 GLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVEL 462
Query: 358 ----------------------------------PNTITYNILIRSLCAIGDVARSLRLF 383
P ++YNILI LC G +
Sbjct: 463 NSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFV 522
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
++M + + PD+ T++ L+ CR KIE A + + L GL PD ++ LI L
Sbjct: 523 KEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSV 582
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
G+ D+A +ME C + T N ++E
Sbjct: 583 GKLDDAMTVMANMEHRNCTANLVTYNTLME 612
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 191/430 (44%), Gaps = 7/430 (1%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
GYA + Y ++ A+ V V R++E+++ + +E S++ + P +A
Sbjct: 38 GYAHSAVVYHHILRRLSEARMVTHVGRIVELIRSQECKCDEDVALSVIKTYGKNSMPDRA 97
Query: 135 FELLIRFMER---EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
++ R E EP + NTLL + ++ G P T++
Sbjct: 98 LDVFKRMREIFGCEPGIRSY--NTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVL 155
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ + + G L+ K G KP +Y ++ L K G+ + + + + R+
Sbjct: 156 IKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRV 215
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEIC-REMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+V YN++ID F K A ++ + + D + PN+ T N +ISG K V
Sbjct: 216 APDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCL 275
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
++ + + + D +T++S+I LC + A +E+VE + +TYN ++
Sbjct: 276 KIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGF 335
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C G + SL L++ M+ R S +I ++N LI+ KI++A + M G DN
Sbjct: 336 CRCGKIKESLELWRIME-QRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADN 394
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+Y I L +G ++A +E G + D Y I++ L ++ R EEA ++VK
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKE 454
Query: 491 SKERGISFKS 500
+ G+ S
Sbjct: 455 MSKHGVELNS 464
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 49/121 (40%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P ++N +I L +D A M C + TYN L+ G ++ + A
Sbjct: 564 GLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRA 623
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M +G P++ +Y ++ G C RV+ + + + P T LV
Sbjct: 624 TVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRA 683
Query: 125 V 125
V
Sbjct: 684 V 684
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN +++ K + A + + M +PD +YN ++ G+C V A+
Sbjct: 607 YNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDAR 666
Query: 73 GLGYAPNVYTYTILIDGFCNAK 94
G P VYT+ IL+ N K
Sbjct: 667 NHGIFPTVYTWNILVRAVVNRK 688
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/477 (23%), Positives = 217/477 (45%), Gaps = 3/477 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P + +I + ++L + Q+ + D + L+ +C +A+
Sbjct: 9 VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAM 68
Query: 66 RLV-KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER--NVCPNEATVRSLV 122
+V ++M LG P+V++Y+ L+ G C K+ E ++ +M E N P+ + +++
Sbjct: 69 NIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVI 128
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
HG F+ D KA+ L + ++ + CN+++ L +A A+L++M D +
Sbjct: 129 HGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM 188
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P +T++ + ++ E IL + G +P TY +L++ L K+G E
Sbjct: 189 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREI 248
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
N + + + +Y ++ + + + M + N TF+ I +CK
Sbjct: 249 FNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCK 308
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + + + GF PD T+ ++ID LC+ R +DA+ +M++ G+ PN IT
Sbjct: 309 CGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIIT 368
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+ LI G ++ LF +M I PD+ F A+I + K+ +A+K F M
Sbjct: 369 FTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMP 428
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
G +P+ SY+ +I +G E + M G P + T N +L+ +V G
Sbjct: 429 RAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMG 485
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 209/472 (44%), Gaps = 20/472 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMS--VDQCKPDRFTYNILIHGICRIGVV 61
LG +P Y+ ++ L + A M+ D C PD +Y+ +IHG + G V
Sbjct: 78 LGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDV 137
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
+A L +M G PNV T +IDG C + + + VL+ M + ++ PN T SL
Sbjct: 138 GKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSL 197
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRG 180
+HG +A +L + M R+ +V N L+ L + +EA I M G
Sbjct: 198 IHGYLSSGQWTEAVRIL-KEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSG 256
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+++T+ + T +L E + D ++ G++ T+ + + A K GR E
Sbjct: 257 PKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEAS 316
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + ++ +Y VID CK+ +D A +M D ++PN++TF TLI G
Sbjct: 317 LTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGF 376
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ K EL +++ G PD F +MID L + + +A M G PN
Sbjct: 377 SMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNV 436
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
++YN +I G+V ++L M + P TFN L+
Sbjct: 437 VSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG---------------- 480
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
M+++GL+PD + LI + + GR ++ F M D+ T N+ L
Sbjct: 481 MVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKL 532
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 161/344 (46%), Gaps = 3/344 (0%)
Query: 156 LLYRLSNNSMASEAAAI-LRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
LL L S+A I LR+M + G P+ ++ + L E ++ +
Sbjct: 54 LLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAED 113
Query: 215 G--VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
G P +Y ++ +K G + + + NV + N VID CKV MD
Sbjct: 114 GDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMD 173
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
+A + ++M D I PN T+N+LI G+ + + +L + G +P+ T+N +I
Sbjct: 174 KAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLI 233
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
DCLC++ +A + + M++ G P+ TY L+ G++ + M + +
Sbjct: 234 DCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMR 293
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
+ +TF+ I ++C+ ++++A F M LG PD +Y+ +I L K GR D+A
Sbjct: 294 SNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSR 353
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
F M +G +P+ T ++ G++E+A ++ +RGI
Sbjct: 354 FCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGI 397
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 155/350 (44%), Gaps = 38/350 (10%)
Query: 173 LRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK 232
+ + G + P+ +TF ++C LN L IK G++ + L+ L
Sbjct: 1 MARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCA 60
Query: 233 AGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD--RDIAPN 289
R + + L + + +V SY+ ++ C + A E+ M + + P+
Sbjct: 61 KKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPD 120
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+V+++T+I G K+ +V K L +L+ G P+ T NS+ID LC+ + A L
Sbjct: 121 VVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQ 180
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
+M++ + PN TYN LI + G ++R+ ++M D P++ T+N LI C+
Sbjct: 181 QMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSG 240
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSAL--------------------------------- 436
+A + F SM+ G +PD +Y +L
Sbjct: 241 FHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFS 300
Query: 437 --IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
I A K GR DEA TF+ M+Q G PD T +++ L + GR ++A
Sbjct: 301 IEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDA 350
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 38/250 (15%)
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
+ +AP++ TF LIS C ++ L +++ G + D F ++ LC R D
Sbjct: 7 KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSD 66
Query: 344 ALD-CLSEMVEWGVPPNTITYNILIRSLCA------------------------------ 372
A++ L M E G P+ +Y+ L++ LCA
Sbjct: 67 AMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYST 126
Query: 373 -------IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
GDV ++ LF KM I P++ T N++I C++ ++KAE M+
Sbjct: 127 VIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 186
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ P+ +Y++LI + SG++ EA + M ++G P+ T N++++ L + G EA
Sbjct: 187 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAR 246
Query: 486 DIVKTSKERG 495
+I + + G
Sbjct: 247 EIFNSMIQSG 256
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
A +++PDI TF LI C + A ++ GLR D +++ L++ L R
Sbjct: 6 AKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTS 65
Query: 448 EAKQTFL-SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+A L M + GC PD ++ + +L+ L + + EEA +++ E G
Sbjct: 66 DAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDG 114
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 225/478 (47%), Gaps = 5/478 (1%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
L + D S+++D+ + ++ CKPD F+Y IL+ G+C +AL L+ M
Sbjct: 140 LLKGLCDRRRTSDAMDIVLRRMPELG---CKPDLFSYTILLKGLCDDKTSQQALDLLHIM 196
Query: 72 -EGLGYAP-NVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
+ G P +V YT +I+G ++ + + + + M +R P+ T S++ + +
Sbjct: 197 ADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQ 256
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
KA ++ R ++ + ++ +L++ ++ EA I +KM G P+ T+
Sbjct: 257 AMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYT 316
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
+ L E I D+ +KRG KP +TY L+ G VE L+ + K
Sbjct: 317 ALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKK 376
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
+ + +NM++ + K N +D A + MR + + P++V + T++ C V
Sbjct: 377 GMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDA 436
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
L G P+ F ++I LC +++ + EM++ G+ +TI +N ++ +
Sbjct: 437 LSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGN 496
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
LC G V + LF M I P+ T+N LI +C K+++A K M+ G++P
Sbjct: 497 LCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPS 556
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+ +Y+ +I ++GR ++ M+ G NP T ++L+ L Q GR A ++
Sbjct: 557 DVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKEL 614
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/501 (22%), Positives = 225/501 (44%), Gaps = 7/501 (1%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ Y VI + +DLA+ ++ + ++ L+ G+C +A+
Sbjct: 96 APNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMD 155
Query: 67 LV-KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE-RNVCPNEATV-RSLVH 123
+V ++M LG P++++YTIL+ G C+ K + +L IM + + CP + ++++
Sbjct: 156 IVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVIN 215
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R KA+ L ++R P + ++++ LS +A + +M G +P
Sbjct: 216 GLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMP 275
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ + V + E GI + GV+P TY LM+ L K G+ E +
Sbjct: 276 DCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIF 335
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K + +Y ++ + + ++ M + + FN ++ + K
Sbjct: 336 DSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKH 395
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V + + + + G PD + +++D LC A R +DAL + + G+ PN + +
Sbjct: 396 NKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVF 455
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI LC + L +M I D FNA++ + C+ ++ +A+ F M+
Sbjct: 456 TTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVR 515
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+G+ P+ +Y+ LI G+ DEA + M NG P T N I+ Q GR E+
Sbjct: 516 IGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIED 575
Query: 484 AHDIVKTSKERGISFKSFPGL 504
+++ +G++ PG+
Sbjct: 576 GLTLLREMDGKGVN----PGI 592
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 210/458 (45%), Gaps = 8/458 (1%)
Query: 4 LGISPS----TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
LG P T L + D ++DL ++ +C D Y +I+G+ R G
Sbjct: 164 LGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKG--RCPLDVVAYTTVINGLLREG 221
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+D+A L M G +P+V TY+ +I + + + +V M + V P+
Sbjct: 222 QLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYT 281
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGD 178
SLVHG P +A + + M R + +V T L+ L N ++EA I +
Sbjct: 282 SLVHGYCSSGKPKEAIGIFKK-MCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVK 340
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
RG+ P+S+T+ + T L E +LD +K+G++ + ++M A K + E
Sbjct: 341 RGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDE 400
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+++ + L ++ +Y V+D C +D A ++ +APN+V F TLI
Sbjct: 401 ALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIH 460
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G C + K EL +++ G D FN+++ LC+ R +A + MV G+ P
Sbjct: 461 GLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEP 520
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
NT TYN LI C G + +++L M + + P T+N +I + + +IE
Sbjct: 521 NTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLL 580
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
M G+ P +Y L++ L ++GR AK+ +L M
Sbjct: 581 REMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 618
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 184/418 (44%), Gaps = 35/418 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP Y+++I AL K+ ++D A F +M + PD Y L+HG C G EA
Sbjct: 237 GPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEA 296
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + K+M G P+V TYT L+D C + E ++ + + +R P+ T +L+HG
Sbjct: 297 IGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHG 356
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +LL M++ + N ++ + ++ EA + M
Sbjct: 357 YATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNM-------- 408
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++G+ P Y +++ L AGR + N
Sbjct: 409 ---------------------------RQQGLNPDIVNYGTVLDILCTAGRVDDALSQFN 441
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L N+ + +I C + D+ E+ EM DR I + + FN ++ CK
Sbjct: 442 SLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKG 501
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V + + L +++ G +P+ T+N++ID C + ++A+ L MV GV P+ +TYN
Sbjct: 502 RVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYN 561
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+I G + L L ++M ++P I T+ L+Q + + A++ + M+
Sbjct: 562 TIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMI 619
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI T +NA++ L K + A F M +P+ TYN LI G C G +DEA
Sbjct: 482 GICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEA 541
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+ M G P+ TY +I+G+ R+ + +L M + V P T L+ G
Sbjct: 542 MKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQG 601
Query: 125 VFRCLDPHKAFELLIRFMERE 145
+F+ A EL +R ++ +
Sbjct: 602 LFQAGRTVAAKELYLRMIKWD 622
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 9/126 (7%)
Query: 372 AIGDVARS-----LRLFQKM---QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
A+ DVAR+ + LF +M A +P+I T+ +I R+ +++ A ++T
Sbjct: 68 ALSDVARASPAVAISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVIT 127
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFL-SMEQNGCNPDSYTSNLILETLVQQGRFE 482
GLR +S L+K L R +A L M + GC PD ++ ++L+ L +
Sbjct: 128 TGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQ 187
Query: 483 EAHDIV 488
+A D++
Sbjct: 188 QALDLL 193
>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 206/475 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN + + + A Q+M + PD TY LI G C++G ++EA
Sbjct: 336 GVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEA 395
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L ++ G+ NV Y +L+ C R+ E + + M+ + P+ L+HG
Sbjct: 396 LKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHG 455
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A++L + + +L L N SEA + +
Sbjct: 456 LCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMED 515
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + V + E + I+RG+ P T+ L+ + G +E + L
Sbjct: 516 VVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLE 575
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ LV +V +Y +++ +C+V M EM + P VT+ LI G C+
Sbjct: 576 VIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQN 635
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++H++ +LL + G PD T+N++I C C+ AL + M+ P +TY
Sbjct: 636 KMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYK 695
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI +LC GD+ R+ ++ I+ T+ +I++ C ++ KA F ML
Sbjct: 696 VLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAK 755
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
G YSA+I L K G EAK F+ M G PD +L QQG
Sbjct: 756 GFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQG 810
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/490 (26%), Positives = 227/490 (46%), Gaps = 7/490 (1%)
Query: 1 ISFLG-----ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGI 55
ISFL + PS N ++ K ID+A F M + D F+YNIL+HG+
Sbjct: 257 ISFLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGL 316
Query: 56 CRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNE 115
C G +DEAL ME G P+V TY L GF ++ +V++ M + + P+
Sbjct: 317 CVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDL 376
Query: 116 ATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
T +L+ G + + +A +L + R + N LL L EA + +
Sbjct: 377 VTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDE 436
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF-IKRGVKPRFSTYLLLMEALYKAG 234
M P+ + + L + + + +KR F+ +L+ L+K G
Sbjct: 437 METLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLL-GLFKNG 495
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
E Y + + L+ +V YN++ID + +++ + A ++ +M +R I P++VTFN
Sbjct: 496 NISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFN 555
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
TLI+G C+ ++ + R++L ++ G P T+ ++++ C ++ L EM
Sbjct: 556 TLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEAN 615
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
V P +TY +LI+ LC + SL+L + M A + PD T+N +IQ FC+ +I KA
Sbjct: 616 AVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKA 675
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
+ + ML P +Y LI AL G + + +S+E T I++
Sbjct: 676 LQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKA 735
Query: 475 LVQQGRFEEA 484
+G+ +A
Sbjct: 736 HCAKGQVSKA 745
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/477 (22%), Positives = 205/477 (42%), Gaps = 40/477 (8%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P + N ++ C++G++D A M G + ++Y IL+ G C A + E
Sbjct: 269 PSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGF 328
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY---- 158
+ M++ V P+ T +L G F L +++ M + L LV T L
Sbjct: 329 TDDMEKHGVEPDVVTYNTLAKG-FLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHC 387
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
++ N EA + ++ RG+ ++ ++CL + E + D ++P
Sbjct: 388 QMGN---IEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEP 444
Query: 219 RFSTYLLLMEALYKAG---------RDVEGDRYLNHVFKDRLV-------SNVNSYNMVI 262
F Y +L+ L K G + R H F R V N++
Sbjct: 445 DFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYF 504
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
D + ++++M+ ++V +N +I G+ + + + +L ++E G
Sbjct: 505 DTWTRMDLME----------------DVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGIT 548
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P TFN++I+ CR +A L + G+ P+ +TY L+ + C +G++
Sbjct: 549 PSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHF 608
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
+M+A+ + P T+ LI+ CR NK+ ++ + M GL PD+ +Y+ +I+ K
Sbjct: 609 LHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCK 668
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
+A Q + M + C+P T +++ L G ++ +V + ++R I+ K
Sbjct: 669 GKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLK 725
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 126/244 (51%), Gaps = 5/244 (2%)
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
+++I C+ + ++ A + ++ + P++V+ NT++S CK + R ++++
Sbjct: 241 SILIHGLCEQSKLEDAISFLHD-SNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVK 299
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
G D F++N ++ LC A ++AL +M + GV P+ +TYN L + +G ++
Sbjct: 300 NGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSG 359
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+ ++ QKM ++PD+ T+ LI C+M IE+A K L+ G + + Y+ L+
Sbjct: 360 ARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLS 419
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
L K GR +EA F ME PD ++++ L ++G + A+ + + + +
Sbjct: 420 CLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLK---- 475
Query: 499 KSFP 502
+ FP
Sbjct: 476 RKFP 479
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 135/310 (43%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
LYN +ID V+ + I A + +M P T+N LI+G CR G + EA ++++ +
Sbjct: 518 LYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVI 577
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
G P+V TYT L++ +C + E+F L M+ V P T L+ G+ R
Sbjct: 578 RLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKM 637
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
H++ +LL + L + NT++ ++A + M P T+
Sbjct: 638 HESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVL 697
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ L DL + ++ + R + + TY+ +++A G+ + Y N +
Sbjct: 698 INALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGF 757
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
V ++ Y+ VI+ CK ++ A M + P+ T+++ + E
Sbjct: 758 VISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFE 817
Query: 312 LLVMLLECGF 321
L M+++ GF
Sbjct: 818 FLAMVVKSGF 827
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 110/242 (45%), Gaps = 13/242 (5%)
Query: 259 NMVIDCFCKVNMMDRATEICREMRD--RDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
N+++D + A+ IC + + R+ N + ++ L + + +H ++ +
Sbjct: 142 NLIVD-----QGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKM 196
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDAL-DCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
+ F+ T+NS++ + R D + D +E+ G P + T +ILI LC
Sbjct: 197 KDLNFQASVPTYNSLLHNM----RHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSK 252
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+ ++ + P I + N ++ FC++ I+ A F M+ GL D+FSY+
Sbjct: 253 LEDAISFLHD-SNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNI 311
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
L+ L +G DEA ME++G PD T N + + + G A +V+ +G
Sbjct: 312 LLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQG 371
Query: 496 IS 497
++
Sbjct: 372 LN 373
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 111/251 (44%), Gaps = 20/251 (7%)
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
SN ++M+ + + M+ A + +M+D + ++ T+N+L+ H R
Sbjct: 168 SNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLL---------HNMRHT 218
Query: 313 LVM------LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+M + G + T + +I LC + EDA+ L + + V P+ ++ N +
Sbjct: 219 DIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTI 277
Query: 367 IRSLCAIG--DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+ C +G DVARS F M + + D +++N L+ C +++A M
Sbjct: 278 MSKFCKVGLIDVARSX--FCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKH 335
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ PD +Y+ L K + G A++ M G NPD T ++ Q G EEA
Sbjct: 336 GVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEA 395
Query: 485 HDIVKTSKERG 495
+ + + RG
Sbjct: 396 LKLRQETLSRG 406
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 104/254 (40%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I G+ PS Y +++A + ++ + +M + P TY +LI G+CR
Sbjct: 577 IRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNK 636
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ E+L+L++ M G P+ TY +I FC K + + ++ +M N P + T +
Sbjct: 637 MHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKV 696
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L++ + D +++ +R +K T++ S+A +M +G
Sbjct: 697 LINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKG 756
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
++ + + L + E + GV P ++ A ++ G +
Sbjct: 757 FVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVF 816
Query: 241 RYLNHVFKDRLVSN 254
+L V K +S+
Sbjct: 817 EFLAMVVKSGFISH 830
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 203/431 (47%), Gaps = 35/431 (8%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N ++ +LVK I + +++M + + T++++I+G+C++G +A +V+ M+
Sbjct: 198 NPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKA 257
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G++P+V TY +IDG+C A ++ + +L+ M + + PNE T L+ G C D +
Sbjct: 258 WGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGF--CRDEN- 314
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
+ A + +M +G P T++ +
Sbjct: 315 --------------------------------VTAAKKVFEEMQRQGLQPNVVTYNSLIN 342
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
L + L+E G+ D G+KP TY L+ K E L+ + K L
Sbjct: 343 GLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAP 402
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV ++N +ID + K MD A + M D + PN+ T+N LI G C++ V + R+L
Sbjct: 403 NVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLA 462
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ G K D T+N ++D LC+ A+ L EM E G+ P+ +TYN LI
Sbjct: 463 KEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFRE 522
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G+ +L + M+ +I T+N LI+ FC K+E+A + ML GL P+ +Y
Sbjct: 523 GNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 582
Query: 434 SALIKALIKSG 444
L +++ G
Sbjct: 583 DILRDEMMEKG 593
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 213/472 (45%), Gaps = 51/472 (10%)
Query: 16 VIDALVKSNSIDLAYLKFQQ-------MSVDQCKPDRFTYNILIHGICRIGVVDEALR-L 67
++ A VK+ +DLA F + +S C P +++ G RIGVV+ + +
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNP--MLVSLVKEG--RIGVVESVYKEM 220
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+++ G+ NV T+ ++I+G C + + V+E MK P+ T +++ G +
Sbjct: 221 IRRRIGV----NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCK 276
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
KA LL + + ++ N L+ + + A + +M +G P T
Sbjct: 277 AGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + L + L+E G+ D G+KP
Sbjct: 337 YNSLINGLCSNGKLDEALGLQDKMSGMGLKP----------------------------- 367
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
NV +YN +I+ FCK M+ A E+ ++ R +APN++TFNTLI + K +
Sbjct: 368 ------NVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMD 421
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
L M+L+ G P+ T+N +I CR ++A EM G+ + +TYNIL+
Sbjct: 422 DAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILV 481
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+LC G+ +++RL +M ++P T+NALI + R A M G R
Sbjct: 482 DALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRR 541
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+ +Y+ LIK G+ +EA + M + G P+ T +++ + ++++G
Sbjct: 542 ANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 593
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 204/475 (42%), Gaps = 38/475 (8%)
Query: 59 GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE--VFRVLEIMKERNVCPNEA 116
G + + + + L A N L+D F + +F L ++ C N
Sbjct: 102 GAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWG-CANSI 160
Query: 117 TVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
V LV + + A E R + L CN +L L ++ ++M
Sbjct: 161 IVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEM 220
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
R TFD + L + +++ G P TY +++ KAG+
Sbjct: 221 IRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKM 280
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
+ D L + R+ N ++N++ID FC+ + A ++ EM+ + + PN+VT+N+L
Sbjct: 281 FKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSL 340
Query: 297 I-----------------------------------SGHCKDAEVHKTRELLVMLLECGF 321
I +G CK + + RE+L + + G
Sbjct: 341 INGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGL 400
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
P+ TFN++ID +A R +DA S M++ GV PN TYN LI C G+V + +
Sbjct: 401 APNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARK 460
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
L ++M+ + + D+ T+N L+ + C+ + KA + M +GL P + +Y+ALI
Sbjct: 461 LAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYF 520
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ G A ME+ G + T N++++ +G+ EEA+ ++ E+G+
Sbjct: 521 REGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGL 575
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 166/347 (47%)
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
++ + L++ N A + GD G+ + + + + LV + +
Sbjct: 160 IIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKE 219
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
I+R + T+ +++ L K G+ + + + +V +YN +ID +CK
Sbjct: 220 MIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGK 279
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
M +A + +EM + I PN +TFN LI G C+D V +++ + G +P+ T+NS
Sbjct: 280 MFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNS 339
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I+ LC + ++AL +M G+ PN +TYN LI C + + + +
Sbjct: 340 LINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRG 399
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
++P++ TFN LI ++ + +++ A ML G+ P+ +Y+ LI + G EA+
Sbjct: 400 LAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEAR 459
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ ME NG D T N++++ L ++G +A ++ E G++
Sbjct: 460 KLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLN 506
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 161/362 (44%), Gaps = 35/362 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SPS YN +ID K+ + A ++M + P+ T+NILI G CR V A
Sbjct: 259 GFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAA 318
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ ++M+ G PNV TY LI+G C+ ++ E + + M + PN T +L++G
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALING 378
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ M EA +L +G RG P
Sbjct: 379 FCK-----------------------------------KKMLKEAREMLDDIGKRGLAPN 403
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + +++ + + GV P STY L+ + G E +
Sbjct: 404 VITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAK 463
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L +++ +YN+++D CK +A + EM + + P+ +T+N LI G+ ++
Sbjct: 464 EMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREG 523
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ ++ + G + + T+N +I C + E+A L+EM+E G+ PN TY+
Sbjct: 524 NSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYD 583
Query: 365 IL 366
IL
Sbjct: 584 IL 585
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 8/247 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S +G+ P+ YNA+I+ K + A + P+ T+N LI + G
Sbjct: 360 MSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGR 419
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+D+A L M G PNV TY LI GFC V E ++ + M+ + + T
Sbjct: 420 MDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNI 479
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL---YRLSNNSMASEAAAILRKMG 177
LV + + + KA LL E L N L+ +R N++ A ++ K G
Sbjct: 480 LVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKG 539
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG--R 235
R + T++ + L E +L+ +++G+ P +TY +L + + + G
Sbjct: 540 RRANI---VTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIP 596
Query: 236 DVEGDRY 242
D++G Y
Sbjct: 597 DIDGHLY 603
>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Cucumis sativus]
Length = 830
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 206/475 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN + + + A Q+M + PD TY LI G C++G ++EA
Sbjct: 336 GVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEA 395
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L ++ G+ NV Y +L+ C R+ E + + M+ + P+ L+HG
Sbjct: 396 LKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHG 455
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A++L + + +L L N SEA + +
Sbjct: 456 LCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMED 515
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + V + E + I+RG+ P T+ L+ + G +E + L
Sbjct: 516 VVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLE 575
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ LV +V +Y +++ +C+V M EM + P VT+ LI G C+
Sbjct: 576 VIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQN 635
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++H++ +LL + G PD T+N++I C C+ AL + M+ P +TY
Sbjct: 636 KMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYK 695
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI +LC GD+ R+ ++ I+ T+ +I++ C ++ KA F ML
Sbjct: 696 VLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAK 755
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
G YSA+I L K G EAK F+ M G PD +L QQG
Sbjct: 756 GFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQG 810
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 132/490 (26%), Positives = 227/490 (46%), Gaps = 7/490 (1%)
Query: 1 ISFLG-----ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGI 55
ISFL + PS N ++ K ID+A F M + D F+YNIL+HG+
Sbjct: 257 ISFLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGL 316
Query: 56 CRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNE 115
C G +DEAL ME G P+V TY L GF ++ +V++ M + + P+
Sbjct: 317 CVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDL 376
Query: 116 ATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
T +L+ G + + +A +L + R + N LL L EA + +
Sbjct: 377 VTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDE 436
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF-IKRGVKPRFSTYLLLMEALYKAG 234
M P+ + + L + + + +KR F+ +L+ L+K G
Sbjct: 437 METLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLL-GLFKNG 495
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
E Y + + L+ +V YN++ID + +++ + A ++ +M +R I P++VTFN
Sbjct: 496 NISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFN 555
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
TLI+G C+ ++ + R++L ++ G P T+ ++++ C ++ L EM
Sbjct: 556 TLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEAN 615
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
V P +TY +LI+ LC + SL+L + M A + PD T+N +IQ FC+ +I KA
Sbjct: 616 AVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKA 675
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
+ + ML P +Y LI AL G + + +S+E T I++
Sbjct: 676 LQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKA 735
Query: 475 LVQQGRFEEA 484
+G+ +A
Sbjct: 736 HCAKGQVSKA 745
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/477 (22%), Positives = 205/477 (42%), Gaps = 40/477 (8%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P + N ++ C++G++D A M G + ++Y IL+ G C A + E
Sbjct: 269 PSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGF 328
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY---- 158
+ M++ V P+ T +L G F L +++ M + L LV T L
Sbjct: 329 TDDMEKHGVEPDVVTYNTLAKG-FLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHC 387
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
++ N EA + ++ RG+ ++ ++CL + E + D ++P
Sbjct: 388 QMGN---IEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEP 444
Query: 219 RFSTYLLLMEALYKAG---------RDVEGDRYLNHVFKDRLV-------SNVNSYNMVI 262
F Y +L+ L K G + R H F R V N++
Sbjct: 445 DFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYF 504
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
D + ++++M+ ++V +N +I G+ + + + +L ++E G
Sbjct: 505 DTWTRMDLME----------------DVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGIT 548
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P TFN++I+ CR +A L + G+ P+ +TY L+ + C +G++
Sbjct: 549 PSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHF 608
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
+M+A+ + P T+ LI+ CR NK+ ++ + M GL PD+ +Y+ +I+ K
Sbjct: 609 LHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCK 668
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
+A Q + M + C+P T +++ L G ++ +V + ++R I+ K
Sbjct: 669 GKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLK 725
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 130/282 (46%)
Query: 216 VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT 275
V P + +M K G + + K+ L+ + SYN+++ C MD A
Sbjct: 267 VGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEAL 326
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
+M + P++VT+NTL G + R+++ +L G PD T+ ++I
Sbjct: 327 GFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGH 386
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
C+ E+AL E + G N I YN+L+ LC +G + +L LF +M+ R+ PD
Sbjct: 387 CQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDF 446
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
++ LI C+ +++A + + M P +F+ A++ L K+G EA+ F +
Sbjct: 447 IVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDT 506
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ D N++++ V+ EA + ERGI+
Sbjct: 507 WTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGIT 548
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 135/310 (43%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
LYN +ID V+ + I A + +M P T+N LI+G CR G + EA ++++ +
Sbjct: 518 LYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVI 577
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
G P+V TYT L++ +C + E+F L M+ V P T L+ G+ R
Sbjct: 578 RLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKM 637
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
H++ +LL + L + NT++ ++A + M P T+
Sbjct: 638 HESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVL 697
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ L DL + ++ + R + + TY+ +++A G+ + Y N +
Sbjct: 698 INALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGF 757
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
V ++ Y+ VI+ CK ++ A M + P+ T+++ + E
Sbjct: 758 VISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFE 817
Query: 312 LLVMLLECGF 321
L M+++ GF
Sbjct: 818 FLAMVVKSGF 827
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 110/272 (40%), Gaps = 49/272 (18%)
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
SN ++M+ + + M+ A + +M+D + ++ T+N+L+ H R
Sbjct: 168 SNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLL---------HNMRHT 218
Query: 313 LVM------LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE---------------- 350
+M + G + T + +I LC + EDA+ L +
Sbjct: 219 DIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKVVGPSIVSINTIM 278
Query: 351 ------------------MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
MV+ G+ ++ +YNIL+ LC G + +L M+ +
Sbjct: 279 SKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVE 338
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PD+ T+N L + F + + A K ML GL PD +Y+ LI + G +EA +
Sbjct: 339 PDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKL 398
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G + N++L L + GR EEA
Sbjct: 399 RQETLSRGFKLNVIFYNMLLSCLCKVGRIEEA 430
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 105/254 (41%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I G+ PS Y +++A + ++ + +M + P TY +LI G+CR
Sbjct: 577 IRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNK 636
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ E+L+L++ M G P+ TY +I FC K + + ++ +M N P + T +
Sbjct: 637 MHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKV 696
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L++ + D +++ +R +K+ T++ S+A +M +G
Sbjct: 697 LINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKG 756
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
++ + + L + E + GV P ++ A ++ G +
Sbjct: 757 FVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVF 816
Query: 241 RYLNHVFKDRLVSN 254
+L V K +S+
Sbjct: 817 EFLAMVVKSGFISH 830
>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/522 (24%), Positives = 239/522 (45%), Gaps = 40/522 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN + +K + +D ++ M+V + KP +T+N+LI +C +G ++ A +
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREV 175
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEA---TVRSLVHG 124
+M G PN ++ IL+ G+C A + +L+ M+ PN TV S + G
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCG 235
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKM--GDRGY 181
+ ++ K L+ M L+ +V N + L + EA+ I R M +
Sbjct: 236 EGQTVEAEK----LVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMG 291
Query: 182 LPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
LP+ +T Y + ++ G E I D+ +K +Y + M L ++G+ +
Sbjct: 292 LPKPNTVTYNL--MLEGFCSEGMFEEARAIFDS-MKNSETLSLRSYNIWMLGLVRSGKLL 348
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E LN + + + N+ SYN+++ CK M A I MR+ +AP+ VT++TL+
Sbjct: 349 EAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLL 408
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G+C+ ++ + +L +++ G P+ +T N ++ L + R +A D L M E G
Sbjct: 409 HGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYG 468
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKM-----------------------QADRISPD 394
+ +T N +I LC G++ +++ + M + PD
Sbjct: 469 LDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPD 528
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
T+ +I C++ ++++A+K M+ L PD+ + I K G+ A +
Sbjct: 529 SITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLK 588
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
ME+ GCN T N +++ L + + E + ++ KERGI
Sbjct: 589 EMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGI 630
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 224/490 (45%), Gaps = 23/490 (4%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
S R YN + LV+S + A+L +M+ KP+ ++YNIL+HG+C+ G+ +A ++
Sbjct: 330 SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSIL 389
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
M G AP+ TY+ L+ G+C ++ E VL M + PN T L+H +++
Sbjct: 390 GLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKE 449
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+A +LL ER + CNT++ L +A I+ M RG S++
Sbjct: 450 GRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRG----SASL 505
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ D+ + P TY ++ L K GR E + L +
Sbjct: 506 GNLGNSFIDLFDIRNN--------GKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIG 557
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+L + ++ I +CK + A + +EM + +L T+N+LI G + ++ +
Sbjct: 558 KKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFE 617
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
L+ + E G P+ +T+N++I CL + +DA L EM++ G+ PN T+ ILI
Sbjct: 618 IYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIG 677
Query: 369 SLCAIGDVARSLRLFQ---KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+ D + LF+ + + S + FN L+ + KA++ F + L
Sbjct: 678 AFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLAG----GETLKAKELFEAALDRS 733
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSM--EQNGCNPDSYTSNLILETLVQQGRFEE 483
L NF Y LI+ L K G+ D+A M +Q +P S+ +++ L ++G
Sbjct: 734 LALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMP--VIDELGKRGSKHA 791
Query: 484 AHDIVKTSKE 493
A + + E
Sbjct: 792 ADEFAERMME 801
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 128/527 (24%), Positives = 227/527 (43%), Gaps = 35/527 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN VI +L A ++M PD T+N I +C+ G + EA
Sbjct: 218 GALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEA 277
Query: 65 LRLVKQM---EGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
R+ + M E +G PN TY ++++GFC+ E + + MK ++RS
Sbjct: 278 SRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETL----SLRS 333
Query: 121 ---LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
+ G+ R +A +L E+ N L++ L M S+A +IL M
Sbjct: 334 YNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMR 393
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
+ G P++ T+ + + E +L I+ G P T +L+ +L+K GR
Sbjct: 394 ESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRAS 453
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA---------- 287
E + L + + + + N +I+ CK +D+A EI M R A
Sbjct: 454 EAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFI 513
Query: 288 -------------PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
P+ +T+ T+I G CK V + ++ L+ ++ PD F++ I
Sbjct: 514 DLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYN 573
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
C+ + A L EM + G + TYN LI+ L + + L +M+ I P+
Sbjct: 574 YCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPN 633
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+YT+N +I K++ A ML G+ P+ +++ LI A K+ F A++ F
Sbjct: 634 VYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELF- 692
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ + C + + L+ G +A ++ + + +R ++ K+F
Sbjct: 693 EIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNF 739
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 156/375 (41%), Gaps = 30/375 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P T Y+ ++ + I A ++M C P+ +T NIL+H + + G EA
Sbjct: 396 GVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEA 455
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC------------ 112
L++ M GY + T +I+G C A + + ++ M R
Sbjct: 456 EDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDL 515
Query: 113 -----------PNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
P+ T +++ G+ + +A + L+ + ++ L+ +T +Y
Sbjct: 516 FDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYC 575
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
S A +L++M +G T++ + L + + E G++D +RG+ P
Sbjct: 576 KQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVY 635
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF---CKVNMMDRATEIC 278
TY ++ L + G+ + L+ + + + N+ ++ ++I F C EI
Sbjct: 636 TYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIA 695
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
+ + FN L++G E K +EL L+ F + +I+ LC+
Sbjct: 696 LSLCGHKESLYSFMFNELLAG----GETLKAKELFEAALDRSLALKNFLYRDLIEKLCKD 751
Query: 339 HRFEDALDCLSEMVE 353
+ +DA L +M++
Sbjct: 752 GKLDDASFILHKMMD 766
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 151/358 (42%), Gaps = 26/358 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P+ N ++ +L K A Q M+ D T N +I+G+C+ G +D+
Sbjct: 430 VGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDK 489
Query: 64 ALRLVKQMEGLGYA-----------------------PNVYTYTILIDGFCNAKRVAEVF 100
A+ +V M G A P+ TY +I G C RV E
Sbjct: 490 AIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAK 549
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL-VCNTLLYR 159
+ L M + + P+ + ++ + AF +L + ME++ + L N+L+
Sbjct: 550 KKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVL-KEMEKKGCNKSLRTYNSLIQG 608
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
L + + E ++ +M +RG P T++ ++CL G L + +LD +++G+ P
Sbjct: 609 LGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPN 668
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
T+ +L+ A +KA D + L + + Y+ + + +A E+
Sbjct: 669 IYTFRILIGAFFKAC-DFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFE 727
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
DR +A + LI CKD ++ +L +++ + D +F +ID L +
Sbjct: 728 AALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGK 785
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%)
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
PP YN+L R V + L++ M ++ P YTFN LI + C M +E A +
Sbjct: 115 PPPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENARE 174
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
F M G +P+ FS L++ ++G M +G P+ N ++ +L
Sbjct: 175 VFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLC 234
Query: 477 QQGRFEEAHDIVKTSKERGIS 497
+G+ EA +V+ +E G+S
Sbjct: 235 GEGQTVEAEKLVEKMREVGLS 255
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 225/482 (46%), Gaps = 3/482 (0%)
Query: 20 LVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPN 79
L+++ ++ + M+ PD LI C+IG A +++ +E G +
Sbjct: 89 LIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVID 148
Query: 80 VYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLI 139
V +Y +LI G+C + + E RVL+ M V PN AT +++ + +A ++L
Sbjct: 149 VTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLG 205
Query: 140 RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL 199
R ++ + + C L+ S +A + +M ++G P+ T++ + G
Sbjct: 206 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGG 265
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
L+E L G +P ++ +++ +L GR ++ + L + + + +V ++N
Sbjct: 266 RLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFN 325
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
++I+ C+ ++ +A + M PN +FN LI G C + + E L +++
Sbjct: 326 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSR 385
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G PD T+N ++ LC+ + +DA+ LS++ G P+ I+YN +I L +G +
Sbjct: 386 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 445
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+ L ++M + PD+ T +++ R K+ +A K F + +RP+ F Y+++I
Sbjct: 446 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITG 505
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
L KS + A M GC P T +++ + +G E+A + RG+ +
Sbjct: 506 LCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKR 565
Query: 500 SF 501
S
Sbjct: 566 SL 567
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 178/371 (47%), Gaps = 8/371 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP+ Y+AV+ +L + A + +C PD T +LI C+ V +
Sbjct: 175 MGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQ 234
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK----ERNVCPNEATVR 119
A++L +M G P+V TY +LI GFC R+ E R L+ + + +V + +R
Sbjct: 235 AMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILR 294
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
SL G R +D A +LL + + L + N L+ L + +A +L M
Sbjct: 295 SLCSG-GRWMD---AMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKH 350
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G+ P S +F+ + G ++ L+ + RG P TY +L+ AL K G+ +
Sbjct: 351 GHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDA 410
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L+ + ++ SYN VID KV + A E+ EM + + P+L+T +++ G
Sbjct: 411 VVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGG 470
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
++ +V + + L +P+ F +NS+I LC++ + A+D L++MV G P
Sbjct: 471 LSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPT 530
Query: 360 TITYNILIRSL 370
TY LI+ +
Sbjct: 531 EATYTTLIKGI 541
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 201/439 (45%), Gaps = 12/439 (2%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D +YN+LI G C+ G ++EALR++ +M G +PN TY ++ C+ ++ + +VL
Sbjct: 148 DVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVL 204
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
+ P+ T L+ + +A +L + + N L+
Sbjct: 205 GRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKG 264
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
EA L+K+ G P+ + + + L +G + +L T +++G P T+
Sbjct: 265 GRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTF 324
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
+L+ L + G + L + K N S+N +I FC +DRA E M
Sbjct: 325 NILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVS 384
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
R P++VT+N L++ CKD +V +L L G P ++N++ID L + + E
Sbjct: 385 RGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAEL 444
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A++ L EM G+ P+ IT ++ L G V +++ F ++ I P+ + +N++I
Sbjct: 445 AVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIIT 504
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
C+ + A M+ G +P +Y+ LIK + G ++A + LS E
Sbjct: 505 GLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASK--LSNEL----- 557
Query: 464 DSYTSNLILETLVQQGRFE 482
Y+ L+ +LV++ E
Sbjct: 558 --YSRGLVKRSLVEKVSLE 574
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 100/248 (40%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS +N +I+ L + + A + M P+ ++N LI G C +D A
Sbjct: 316 GCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRA 375
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ M G P++ TY IL+ C +V + +L + + P+ + +++ G
Sbjct: 376 IEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDG 435
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A ELL + + C +++ LS EA + P
Sbjct: 436 LLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPN 495
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ +T L + L + +G KP +TY L++ + G + + N
Sbjct: 496 AFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSN 555
Query: 245 HVFKDRLV 252
++ LV
Sbjct: 556 ELYSRGLV 563
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G SPS YN VID L+K +LA ++M KPD T ++ G+ R G
Sbjct: 417 LSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGK 476
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V EA++ ++ PN + Y +I G C +++ + L M + P EAT +
Sbjct: 477 VREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTT 536
Query: 121 LVHGV 125
L+ G+
Sbjct: 537 LIKGI 541
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN ++ AL K +D A + Q+S C P +YN +I G+ ++G + A
Sbjct: 386 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 445
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+++M G P++ T T ++ G +V E + +K + PN S++ G
Sbjct: 446 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITG 505
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A + L + + + TL+ ++ +A +A+ + ++ RG +
Sbjct: 506 LCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKR 565
Query: 185 S 185
S
Sbjct: 566 S 566
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 7/136 (5%)
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+R L G++ R + M SPD+ ALI+ FC++ + + A + + G
Sbjct: 86 LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
D SY+ LI KSG +EA + +++ G +P++ T + +L +L +G+ ++A
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRV---LDRMGVSPNAATYDAVLCSLCDRGKLKQAMQ 202
Query: 487 IVKTSKERGISFKSFP 502
++ R + K +P
Sbjct: 203 VLG----RQLQSKCYP 214
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/500 (25%), Positives = 228/500 (45%), Gaps = 9/500 (1%)
Query: 2 SFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD----QCKPDRFTYNILIHGICR 57
S LG +P R +NA++DA V++ A F +S + P+ TYNI++ +C
Sbjct: 111 SILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCA 170
Query: 58 IGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
G +D A+ L + AP+ TY+ L+ G R+ +L+ M V P+
Sbjct: 171 RGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVC 230
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKM 176
+L+ G F+ + K + + ++ L N +L L E + +M
Sbjct: 231 YNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERM 290
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
P+ T+ + L D++ + IK G+ + Y L++ +AGR
Sbjct: 291 VANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRV 350
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA--PNLVTFN 294
E ++ + L N+ +YN++I M+D A E+ ++ ++D+A P+ VTF
Sbjct: 351 QEAWKFWDSAGFAGL-RNLRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFG 408
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
TLI G C++ +K + G + D F+++SMI+ LC R DA+ +M +
Sbjct: 409 TLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKD 468
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G PN+ YN LI C + + ++R++ KM + SP + T+N LI C+ K ++A
Sbjct: 469 GCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEA 528
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
M+ G PD +Y +LI+ L + D+A + + G D N+++
Sbjct: 529 SSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHG 588
Query: 475 LVQQGRFEEAHDIVKTSKER 494
L G+ +EA + KE+
Sbjct: 589 LCSAGKVDEALHVFSDMKEK 608
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 214/481 (44%), Gaps = 40/481 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN ++D L K +++M + +PD TY ILIHG+CR G VD A
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGA 318
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R+ ++ G + Y L+ GFC A RV E ++ + + N T ++ G
Sbjct: 319 ARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGL-RNLRTYNIMIKG 377
Query: 125 VFRCLDPHKAFELLIRFMEREP--LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+F +A EL +E++ + + TL++ L N A++A I +
Sbjct: 378 LFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEE------- 429
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
V+G L D F +Y ++ L GR V+ +
Sbjct: 430 -----------ARVSGKQL-------DVF----------SYSSMINGLCNVGRLVDAVKV 461
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ KD N + YN +I FC+V A I +M D +P ++T+NTLI G CK
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCK 521
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + ++E GF PD T+ S+I L + +DAL +++ G+ + +
Sbjct: 522 AEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMM 581
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADR-ISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
+NILI LC+ G V +L +F M+ + P++ T+N L+ I+KA + S+
Sbjct: 582 HNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSI 641
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
GL PD SY+ IK L R E Q + G P T N+++ +++ G
Sbjct: 642 TEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701
Query: 482 E 482
+
Sbjct: 702 Q 702
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/501 (25%), Positives = 222/501 (44%), Gaps = 18/501 (3%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P Y+ ++ L K + +D A +M +PD YN L+ G + G ++ +
Sbjct: 189 VAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVM 248
Query: 66 RLV-KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R+ K ++ G PN+ TY +++DG C R EV V E M N+ P+ T L+HG
Sbjct: 249 RVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHG 308
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R D A + ++ + + N+L+ EA G G L
Sbjct: 309 LCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAG-LRN 367
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKR-GVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + L ++E + D K P T+ L+ L + G +
Sbjct: 368 LRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNG-------FA 420
Query: 244 NH---VFKDRLVS----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
N +F++ VS +V SY+ +I+ C V + A ++ +M PN +N L
Sbjct: 421 NKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNAL 480
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
ISG C+ + + + G P T+N++ID LC+A ++++A EMVE G
Sbjct: 481 ISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGF 540
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
P+ TY LIR L + + +L +++++ + D+ N LI C K+++A
Sbjct: 541 TPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALH 600
Query: 417 AFFSMLTLGLRPDNF-SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
F M P N +Y+ L+ L ++G D+A + S+ ++G PD + N ++ L
Sbjct: 601 VFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGL 660
Query: 476 VQQGRFEEAHDIVKTSKERGI 496
R E ++ RGI
Sbjct: 661 CSCDRIHEGIQLLDEVLSRGI 681
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/456 (21%), Positives = 205/456 (44%), Gaps = 10/456 (2%)
Query: 50 ILIHGICRIGVVDEALRLVKQMEG-LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
+++ R + D AL + + LG P + ++ L+D F A+R ++ +
Sbjct: 88 VVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSH 147
Query: 109 ----RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNS 164
R + PN T ++ + D +A L R+ + +TL+ L+
Sbjct: 148 GAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQD 207
Query: 165 MASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK-RGVKPRFSTY 223
A +L +M G P+ ++ + + + + D +K G +P +TY
Sbjct: 208 RLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
++++ L K GR E + + L +V +Y ++I C+ +D A + E+
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
+ + +N+L+ G C+ V + + G + + T+N MI L + ++
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDE 386
Query: 344 ALDCLSEMVEWGVP--PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
A++ L +++E V P+T+T+ LI LC G ++ +F++ + D+++++++
Sbjct: 387 AIE-LWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSM 445
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I C + ++ A K + M G +P++ Y+ALI + R +A + + M NGC
Sbjct: 446 INGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGC 505
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+P T N +++ L + +++EA + + E G +
Sbjct: 506 SPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFT 541
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 211/489 (43%), Gaps = 43/489 (8%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ YNA+I AL + + A M +PD FT+N LI G CR ++ A
Sbjct: 126 APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHD 185
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L +M G++ + +Y LI+GFC A R+ E + M + P+ T +LV G
Sbjct: 186 LFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKG-- 239
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
L + E +L+KM + G+ P +
Sbjct: 240 ---------------------------------LCDAGRGEEGLCMLQKMKELGWRPTTR 266
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ V E IL+ G+ P T +++ A + GR R +
Sbjct: 267 AYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESM 326
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
NV +YN ++ FC + +A + +MR+ + P++VT+N LI G C D +
Sbjct: 327 RFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHI 386
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
LL ++ G D++T+N +ID LC+ + ++A + G+ PN++T+N +
Sbjct: 387 GSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTV 446
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF--SMLTL 424
I LC G + + M + +PD YT++ I++ C+ + E FF ML
Sbjct: 447 INGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQ--EGLFFIDEMLQK 504
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
++P +Y+ +I L + A + + M GC+PD T + +GR +EA
Sbjct: 505 DVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEA 564
Query: 485 HDIVKTSKE 493
++V K+
Sbjct: 565 ENVVTEMKK 573
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 209/463 (45%), Gaps = 4/463 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P +N++I ++ +++A+ F +M D +Y LI G C G +DEA
Sbjct: 159 GWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEA 218
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L ++M P++YT+ L+ G C+A R E +L+ MKE P +LV
Sbjct: 219 LELFREMT----QPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDL 274
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R +A ++L + + + C ++ S A + M +G P
Sbjct: 275 WCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPN 334
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ V + + +LD + GV+P TY LL+ G R L
Sbjct: 335 VWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLR 394
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L ++ +YN++ID CK +D A + + R I PN VTFNT+I+G CK
Sbjct: 395 LMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAG 454
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ L ++ G+ PD +T++ I+ LC+ ++ L + EM++ V P+T+ Y
Sbjct: 455 KFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYT 514
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+I L + + R++ +M + SPD+ T+ ++++C ++++AE M
Sbjct: 515 IVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKC 574
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
D +Y+ LI G+ D A M P+ +T
Sbjct: 575 RTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFT 617
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 131/539 (24%), Positives = 224/539 (41%), Gaps = 57/539 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P+TR Y A++D + + A +M P T I+++ CR G +
Sbjct: 259 LGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSG 318
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+R+ + M G PNV+TY ++ GFCNA +V + +L+ M+E V P+ T L+
Sbjct: 319 AVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIR 378
Query: 124 GVFRCLDPH--KAFELLIRFMEREPL-TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
G +C+D H AF LL R ME L + N L+ L EA ++ + RG
Sbjct: 379 G--QCIDGHIGSAFRLL-RLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRG 435
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P S TF+ + L + C L+ I G P TY +E L K EG
Sbjct: 436 IRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGL 495
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+++ + + + + +Y +VI+ AT I +M + +P++VT+ T + +
Sbjct: 496 FFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAY 555
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C + + + ++ + +C D +N++ID + + A+ L M PN
Sbjct: 556 CNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNH 615
Query: 361 ITYNILIR----------------SLCAIGDVARSLRLFQKMQADRISPDIYT------- 397
T+ IL+R S+ ++A LF+ M+ + + T
Sbjct: 616 FTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEG 675
Query: 398 ----------------------------FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
+NAL+ FC++ A SM+ G P+
Sbjct: 676 FSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPN 735
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
Y L+ L G+ D AK+ F S N D +I++ +++G + HD++
Sbjct: 736 LIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMI 794
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 153/315 (48%), Gaps = 6/315 (1%)
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-DVEGDR 241
P +T++ + L DL L ++ G +P T+ L+ + + +V D
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ F+ + SY +I+ FC+ +D A E+ REM P++ T L+ G C
Sbjct: 187 FCKMPFRG-FSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLC 241
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ +L + E G++P + +++D CR + E+A L+EM + G+ P +
Sbjct: 242 DAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVV 301
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
T I++ + C G ++ ++R+F+ M+ P+++T+NA++Q FC K+ KA M
Sbjct: 302 TCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQM 361
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G+ PD +Y+ LI+ G A + ME NG D YT N++++ L + G+
Sbjct: 362 RECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKV 421
Query: 482 EEAHDIVKTSKERGI 496
+EA + + RGI
Sbjct: 422 DEACSLFDGLEYRGI 436
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 131/284 (46%), Gaps = 4/284 (1%)
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
P +TY L+ AL + RYL+ + + + ++N +I +C+ ++ A ++
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
+M R + + V++ LI G C+ + + EL + + PD +T +++ LC
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCD 242
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
A R E+ L L +M E G P T Y L+ C + ++ +M + P + T
Sbjct: 243 AGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVT 302
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
++ ++CR ++ A + F SM G P+ ++Y+A+++ +G+ +A M
Sbjct: 303 CTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMR 362
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ G PD T NL++ G A +++ + G++ +
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQY 406
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 153/386 (39%), Gaps = 16/386 (4%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ + GI P++ +N VI+ L K+ D+A + M PD +TY+ I +C+
Sbjct: 431 LEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKG 490
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
E L + +M P+ YTI+I+ N + R+ M + P+ T +
Sbjct: 491 SQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTT 550
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
V +A ++ + + + NTL+ ++ A IL+ M
Sbjct: 551 SVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVA 610
Query: 181 YLPESSTF----------------DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYL 224
+P TF T + ++L + + + K V TYL
Sbjct: 611 SMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYL 670
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
++E + R E ++ + ++ L N + YN +++CFCK+ M A + M
Sbjct: 671 SILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGH 730
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
PNL+ + L+SG + + + +E+ + D+ + +ID R +
Sbjct: 731 GFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMC 790
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSL 370
D +S + + P+ TY +L L
Sbjct: 791 HDMISMLEQMKCKPSDETYAMLTEEL 816
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 211/472 (44%), Gaps = 7/472 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN ++ AL K+N +D A+ +MS C PD +Y LI +C++G V EA
Sbjct: 176 GMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA 235
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + + P+V Y LI+G C E F++L+ M + + PN + ++++
Sbjct: 236 REL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINA 290
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + +L + R +L+ + EA +M G +P
Sbjct: 291 LSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPN 350
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG-DRYL 243
++ + L + L + + + G P TY L++ KAG D++G
Sbjct: 351 VVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG-DLDGASEVW 409
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + NV +Y ++D C+ +M ++A + M+ + PN VTFNT I G C
Sbjct: 410 NWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGS 469
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V ++ + G P+ T+N ++D L + RF +A + +M G+ N +TY
Sbjct: 470 GRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTY 529
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N +I C G + +L L KM PD T N +I ++C+ K+ A + +
Sbjct: 530 NTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSA 589
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
PD +Y++LI + +EA M G +P+ T N+++ L
Sbjct: 590 GKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHL 641
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/496 (26%), Positives = 222/496 (44%), Gaps = 13/496 (2%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ ++YN ++DAL+ N + + M D +P+ FTYNIL+ +C+ VD A
Sbjct: 142 VKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAH 201
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+L+ +M G P+ +YT LI C +V E R L + + P+ +L++GV
Sbjct: 202 KLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA-RELAM----SFTPSVPVYNALINGV 256
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ +AF+LL M + + T++ LS+ + A+L KM RG P
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316
Query: 186 STFDYTVTCLVTGLDL----NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
TF T L+ G L +E D I+ GV P Y LM L +
Sbjct: 317 HTF----TSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVS 372
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
N + + NV +Y+ +ID + K +D A+E+ M PN+V + ++ C
Sbjct: 373 VFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLC 432
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+++ ++ L+ + P+ TFN+ I LC + R + A+ +M G PNT
Sbjct: 433 RNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTT 492
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN L+ SL + L + M+ I ++ T+N +I +C + +A + M
Sbjct: 493 TYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKM 552
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ G +PD + + +I A K G+ + A Q + +PD ++ +
Sbjct: 553 VVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGV 612
Query: 482 EEAHDIVKTSKERGIS 497
EEA ++ GIS
Sbjct: 613 EEAIVYLRRMLSEGIS 628
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 212/480 (44%), Gaps = 5/480 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GIS S L+ +VI + ++ S + A F +M + KP YN ++ +
Sbjct: 106 GISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMI 165
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M+ G PNV+TY IL+ C RV ++L M + P+E + +L+
Sbjct: 166 NPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISS 225
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A EL + F P V N L+ + EA +L +M ++G P
Sbjct: 226 LCKLGKVKEARELAMSFTPSVP-----VYNALINGVCKEYTFEEAFQLLDEMMNKGIDPN 280
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + L ++ + +L RG P T+ L++ + G E + +
Sbjct: 281 VISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWD 340
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ +V NV +YN ++ C + A + +M PN+ T++ LI G+ K
Sbjct: 341 RMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ E+ ++ G P+ + M+D LCR F A + M PPNT+T+N
Sbjct: 401 DLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFN 460
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+ LC G V ++++F +M P+ T+N L+ S + + +A M
Sbjct: 461 TFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHR 520
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ + +Y+ +I +G EA + M G PD+ T N++++ +QG+ A
Sbjct: 521 GIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIA 580
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 196/488 (40%), Gaps = 44/488 (9%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVD--QCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
Y +I+ L +D QQM ++ C D F +I R G ++AL+ +
Sbjct: 79 YQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFIS--VIGSYRRAGSSEQALKTFYR 136
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M+ P V Y ++D + R + + MK+ + PN T
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTY------------ 184
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
N LL L N+ A +L +M +G P+ ++
Sbjct: 185 -----------------------NILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTT 221
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
++ L + E + +F P Y L+ + K E + L+ +
Sbjct: 222 LISSLCKLGKVKEARELAMSF-----TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKG 276
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+ NV SY +I+ ++ + + +M R +PNL TF +LI G H+
Sbjct: 277 IDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEAL 336
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+ ++ G P+ +N+++ LC DA+ ++M G PN TY+ LI
Sbjct: 337 DFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGY 396
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
GD+ + ++ M P++ + ++ CR + +A +M P+
Sbjct: 397 AKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNT 456
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+++ IK L SGR D A + F M +GC P++ T N +L++L++ RF EA +VK
Sbjct: 457 VTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKD 516
Query: 491 SKERGISF 498
+ RGI
Sbjct: 517 MEHRGIEL 524
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 2/222 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+T +N I L S +D A F QM C P+ TYN L+ + + EA L
Sbjct: 454 PNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGL 513
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
VK ME G N+ TY +I G+C A + E +L M R P+ TV ++ +
Sbjct: 514 VKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCK 573
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ A +L+ R + + +L+ + + EA LR+M G P +T
Sbjct: 574 QGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVAT 633
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEA 229
++ V L + + + LD ++P+F ++ EA
Sbjct: 634 WNVLVRHLFSNMGHSGAVQFLDA--SSIMQPKFVVLIITKEA 673
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+T YN ++D+L+K A+ + M + + TYN +I+G C G++ EA
Sbjct: 486 GCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEA 545
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+ +M G P+ T I+ID +C +V ++++ + P+ SL+ G
Sbjct: 546 LELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISG 605
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAIL 173
+ + +A L R + N L+ L +N S A L
Sbjct: 606 ICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFL 654
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 211/472 (44%), Gaps = 7/472 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN ++ AL K+N +D A+ +MS C PD +Y LI +C++G V EA
Sbjct: 176 GMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA 235
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + + P+V Y LI+G C E F++L+ M + + PN + ++++
Sbjct: 236 REL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINA 290
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + +L + R +L+ + EA +M G +P
Sbjct: 291 LSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPN 350
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG-DRYL 243
++ + L + L + + + G P TY L++ KAG D++G
Sbjct: 351 VVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG-DLDGASEVW 409
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + NV +Y ++D C+ +M ++A + M+ + PN VTFNT I G C
Sbjct: 410 NWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGS 469
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V ++ + G P+ T+N ++D L + RF +A + +M G+ N +TY
Sbjct: 470 GRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTY 529
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N +I C G + +L L KM PD T N +I ++C+ K+ A + +
Sbjct: 530 NTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSA 589
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
PD +Y++LI + +EA M G +P+ T N+++ L
Sbjct: 590 GKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHL 641
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/496 (26%), Positives = 222/496 (44%), Gaps = 13/496 (2%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ ++YN ++DAL+ N + + M D +P+ FTYNIL+ +C+ VD A
Sbjct: 142 VKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAH 201
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+L+ +M G P+ +YT LI C +V E R L + + P+ +L++GV
Sbjct: 202 KLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA-RELAM----SFTPSVPVYNALINGV 256
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ +AF+LL M + + T++ LS+ + A+L KM RG P
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316
Query: 186 STFDYTVTCLVTGLDL----NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
TF T L+ G L +E D I+ GV P Y LM L +
Sbjct: 317 HTF----TSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVS 372
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
N + + NV +Y+ +ID + K +D A+E+ M PN+V + ++ C
Sbjct: 373 VFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLC 432
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+++ ++ L+ + P+ TFN+ I LC + R + A+ +M G PNT
Sbjct: 433 RNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTT 492
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN L+ SL + L + M+ I ++ T+N +I +C + +A + M
Sbjct: 493 TYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKM 552
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ G +PD + + +I A K G+ + A Q + +PD ++ +
Sbjct: 553 VVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGV 612
Query: 482 EEAHDIVKTSKERGIS 497
EEA ++ GIS
Sbjct: 613 EEAIVYLRRMLSEGIS 628
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/476 (24%), Positives = 211/476 (44%), Gaps = 5/476 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GIS S L+ +VI + ++ S + A F +M + KP YN ++ +
Sbjct: 106 GISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMI 165
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M+ G PNV+TY IL+ C RV ++L M + P+E + +L+
Sbjct: 166 NPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISS 225
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A EL + F P V N L+ + EA +L +M ++G P
Sbjct: 226 LCKLGKVKEARELAMSFTPSVP-----VYNALINGVCKEYTFEEAFQLLDEMMNKGIDPN 280
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + L ++ + +L RG P T+ L++ + G E + +
Sbjct: 281 VISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWD 340
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ +V NV +YN ++ C + A + +M PN+ T++ LI G+ K
Sbjct: 341 RMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ E+ ++ G P+ + M+D LCR F A + M PPNT+T+N
Sbjct: 401 DLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFN 460
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+ LC G V ++++F +M P+ T+N L+ S + + +A M
Sbjct: 461 TFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHR 520
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
G+ + +Y+ +I +G EA + M G PD+ T N++++ +QG+
Sbjct: 521 GIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGK 576
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 196/488 (40%), Gaps = 44/488 (9%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVD--QCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
Y +I+ L +D QQM ++ C D F +I R G ++AL+ +
Sbjct: 79 YQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFIS--VIGSYRRAGSSEQALKTFYR 136
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M+ P V Y ++D + R + + MK+ + PN T
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTY------------ 184
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
N LL L N+ A +L +M +G P+ ++
Sbjct: 185 -----------------------NILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTT 221
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
++ L + E + +F P Y L+ + K E + L+ +
Sbjct: 222 LISSLCKLGKVKEARELAMSF-----TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKG 276
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+ NV SY +I+ ++ + + +M R +PNL TF +LI G H+
Sbjct: 277 IDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEAL 336
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+ ++ G P+ +N+++ LC DA+ ++M G PN TY+ LI
Sbjct: 337 DFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGY 396
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
GD+ + ++ M P++ + ++ CR + +A +M P+
Sbjct: 397 AKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNT 456
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+++ IK L SGR D A + F M +GC P++ T N +L++L++ RF EA +VK
Sbjct: 457 VTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKD 516
Query: 491 SKERGISF 498
+ RGI
Sbjct: 517 MEHRGIEL 524
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+T +N I L S +D A F QM C P+ TYN L+ + + EA L
Sbjct: 454 PNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGL 513
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
VK ME G N+ TY +I G+C A + E +L M R P+ TV ++ +
Sbjct: 514 VKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCK 573
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ A +L+ R + + +L+ + + EA LR+M G P +T
Sbjct: 574 QGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVAT 633
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
++ V L + + + LD + G + RF
Sbjct: 634 WNVLVRHLFSNMGHSGAVQFLDAVLGSGFETRF 666
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+T YN ++D+L+K A+ + M + + TYN +I+G C G++ EA
Sbjct: 486 GCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEA 545
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+ +M G P+ T I+ID +C +V ++++ + P+ SL+ G
Sbjct: 546 LELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISG 605
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ + +A L R + N L+ L +N S A L + G+
Sbjct: 606 ICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGF 662
>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like, partial [Glycine max]
Length = 594
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/509 (25%), Positives = 232/509 (45%), Gaps = 51/509 (10%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKP---DRFTYNILIHGICRIGVVDEAL 65
S L + + A V +N LA+ FQ + D +TYN L+ G+C G +DEA+
Sbjct: 98 SKPLLDTSLAAYVHANQPHLAFQLFQNELIXXXXXXSIDVWTYNTLVKGLCDEGKIDEAI 157
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER-NVCPNEATVRSLVHG 124
R+ +ME L P+V TY LIDG + E FR+LE MK R V PN T
Sbjct: 158 RVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRGGVEPNAVT------- 210
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+++++ +E +EA+ + KM + G P+
Sbjct: 211 ----------HNIMVKWFGKE------------------GKINEASDAVVKMVESGVSPD 242
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L E ++D ++G+KP T ++ L + E
Sbjct: 243 CFTYNTMINGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTV 302
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
K + + +Y +I + K D+A ++ EM+ R I P++V++N LI G C
Sbjct: 303 KARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSG 362
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + L LLE G PD+ + N +I C + A ++MV P+ T N
Sbjct: 363 KTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRN 422
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
IL+R LC + + ++ +LF + + S D+ T+N +I C+ ++++A M
Sbjct: 423 ILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVK 482
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET---------- 474
PD ++Y+A+++AL +GR +EA++ + + G ++ ++ L+
Sbjct: 483 KFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQI 542
Query: 475 --LVQQGRFEEAHDIVKTSKERGISFKSF 501
L QG+++EA + + S+++G+S +
Sbjct: 543 SDLCTQGKYKEAMKLFQESEQKGVSLNKY 571
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 211/428 (49%), Gaps = 14/428 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKPDRFTYNILIHGICRIGVVD 62
L + P YN +ID K + ++M S +P+ T+NI++ + G ++
Sbjct: 166 LKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRGGVEPNAVTHNIMVKWFGKEGKIN 225
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA V +M G +P+ +TY +I+GFC A ++ E FR+++ M + + P+ T+ +++
Sbjct: 226 EASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTML 285
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
H + P +A+EL ++ +R + ++ TL+ +A + +M RG +
Sbjct: 286 HTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIV 345
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P +++ + L ++ L+ +++G+ P + +++ G + ++
Sbjct: 346 PSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQF 405
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
N + + ++ + N+++ C+V+M+++A ++ + + ++VT+NT+IS CK
Sbjct: 406 HNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCK 465
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT-- 360
+ + + +L+ + F+PD++T+N+++ L A R E+A +S++ E G T
Sbjct: 466 EGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHD 525
Query: 361 ----------ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
I Y+ I LC G +++LFQ+ + +S + YT+ L+ F + K
Sbjct: 526 TSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLMDGFLKRRK 585
Query: 411 -IEKAEKA 417
I K + A
Sbjct: 586 SISKVDHA 593
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 213/466 (45%), Gaps = 8/466 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ ISP+ +N VI AL K +D A F+ M +C PD +TY L+ G+C+ +DE
Sbjct: 181 MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+ +M+ G +P+ Y +LIDG C + V ++++ M + PNE T +L+H
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIH 300
Query: 124 GVFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
G+ CL KA LL R + + + + TL+ L A++A +L M +RGY
Sbjct: 301 GL--CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+ ++ L E + ++G KP Y +L++ L + G+ E
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
LN + + N +Y+ ++ F K + + A ++ +EM + N ++ LI G C
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP---P 358
V + + +L G KPD ++S+I LC + AL EM+ P P
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC-RMNKIEKAEKA 417
+ +TYNIL+ LC D++R++ L M PD+ T N + + + N +K
Sbjct: 539 DVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSF 598
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
++ L+ S + I ++ T+ + + C P
Sbjct: 599 LEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKP 644
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 197/439 (44%), Gaps = 38/439 (8%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P+ ++N++I +C++ VD A+ + + M P+ YTY L+DG C +R+ E +
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 244
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
L+ M+ P+ L+ G+ + D + +L+ + + ++ NTL++ L
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 304
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+A ++L +M +P T+ + LV + +L + +RG
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y +L+ L+K G+ E A + R+M
Sbjct: 365 YSVLISGLFKEGKAEE-----------------------------------AMSLWRKMA 389
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
++ PN+V ++ L+ G C++ + ++ +E+L ++ G P+ +T++S++ + E
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCE 449
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+A+ EM + G N Y++LI LC +G V ++ ++ KM I PD ++++I
Sbjct: 450 EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII 509
Query: 403 QSFCRMNKIEKAEKAFFSMLTL---GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
+ C + ++ A K + ML +PD +Y+ L+ L A SM
Sbjct: 510 KGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDR 569
Query: 460 GCNPDSYTSNLILETLVQQ 478
GC+PD T N L TL ++
Sbjct: 570 GCDPDVITCNTFLNTLSEK 588
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 186/432 (43%), Gaps = 26/432 (6%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P Y ++D L K ID A L +M + C P YN+LI G+C+ G + +L
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKL 279
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
V M G PN TY LI G C ++ + +LE M PN+ T +L++G+ +
Sbjct: 280 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK 339
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
A LL ER + + + L+ L A EA ++ RKM ++G P
Sbjct: 340 QRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVV 399
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ V L NE IL+ I G P TY LM+ +K G E + +
Sbjct: 400 YSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMD 459
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK----D 303
K N Y+++ID C V + A + +M I P+ V ++++I G C D
Sbjct: 460 KTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMD 519
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
A + E+L E +PD T+N ++D LC A+D L+ M++ G P+ IT
Sbjct: 520 AALKLYHEMLCQ-EEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITC 578
Query: 364 NILIRSLCAIG---DVARS------LRLFQK------------MQADRISPDIYTFNALI 402
N + +L D RS +RL ++ M ++P T+ ++
Sbjct: 579 NTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIV 638
Query: 403 QSFCRMNKIEKA 414
+ C+ KI A
Sbjct: 639 REICKPKKINAA 650
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 207/494 (41%), Gaps = 45/494 (9%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQ--CKPDRFTYNILIHGICRIGVVDEALR-- 66
R + V A K++ D A F +M VD+ CK ++N +++ I G+ L
Sbjct: 113 RSFIVVFRAYGKAHLPDKAVDLFHRM-VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFY 171
Query: 67 --LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+V + +PN ++ ++I C + V V M ER P+ T +L+ G
Sbjct: 172 DYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDG 231
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
L EA +L +M G P
Sbjct: 232 -----------------------------------LCKEERIDEAVLLLDEMQSEGCSPS 256
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + L DL ++D +G P TY L+ L G+ + L
Sbjct: 257 PVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLE 316
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + N +Y +I+ K A + M +R N ++ LISG K+
Sbjct: 317 RMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEG 376
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L + E G KP+ ++ ++D LCR + +A + L+ M+ G PN TY+
Sbjct: 377 KAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYS 436
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L++ G +++++++M S + + ++ LI C + ++++A + MLT+
Sbjct: 437 SLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTI 496
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSM---EQNGCNPDSYTSNLILETLVQQGRF 481
G++PD +YS++IK L G D A + + M E+ PD T N++L+ L Q
Sbjct: 497 GIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDI 556
Query: 482 EEAHDIVKTSKERG 495
A D++ + +RG
Sbjct: 557 SRAVDLLNSMLDRG 570
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 148/333 (44%), Gaps = 40/333 (12%)
Query: 207 ILDTF-IKRGVKPRFSTYL--LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
++D F KR VK F++ L ++ E LY G + D +N + N S+N+VI
Sbjct: 138 MVDEFRCKRSVK-SFNSVLNVIINEGLYHRGLEFY-DYVVNSNMNMNISPNGLSFNLVIK 195
Query: 264 CFCKVNMMDRATEICR-----------------------------------EMRDRDIAP 288
CK+ +DRA E+ R EM+ +P
Sbjct: 196 ALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSP 255
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+ V +N LI G CK ++ + +L+ + G P++ T+N++I LC + + A+ L
Sbjct: 256 SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL 315
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
MV PN +TY LI L ++RL M+ + + ++ LI +
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKE 375
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
K E+A + M G +P+ YS L+ L + G+ +EAK+ M +GC P++YT
Sbjct: 376 GKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTY 435
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ +++ + G EEA + K + G S F
Sbjct: 436 SSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKF 468
>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/522 (24%), Positives = 239/522 (45%), Gaps = 40/522 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN + +K + +D ++ M+V + KP +T+N+LI +C +G ++ A +
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREV 175
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEA---TVRSLVHG 124
+M G PN ++ IL+ G+C A + +L+ M+ PN TV S + G
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCG 235
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKM--GDRGY 181
+ ++ K L+ M L+ +V N + L + EA+ I R M +
Sbjct: 236 EGQTVEAEK----LVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMG 291
Query: 182 LPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
LP+ +T Y + ++ G E I D+ +K +Y + M L ++G+ +
Sbjct: 292 LPKPNTVTYNL--MLEGFCSEGMFEEARAIFDS-MKNSETLSLRSYNIWMLGLVRSGKLL 348
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E LN + + + N+ SYN+++ CK M A I MR+ +AP+ VT++TL+
Sbjct: 349 EAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLL 408
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G+C+ ++ + +L +++ G P+ +T N ++ L + R +A D L M E G
Sbjct: 409 HGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYG 468
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKM-----------------------QADRISPD 394
+ +T N +I LC G++ +++ + M + PD
Sbjct: 469 LDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPD 528
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
T+ +I C++ ++++A+K M+ L PD+ + I K G+ A +
Sbjct: 529 SITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLK 588
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
ME+ GCN T N +++ L + + E + ++ KERGI
Sbjct: 589 EMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGI 630
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 224/490 (45%), Gaps = 23/490 (4%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
S R YN + LV+S + A+L +M+ KP+ ++YNIL+HG+C+ G+ +A ++
Sbjct: 330 SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSIL 389
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
M G AP+ TY+ L+ G+C ++ E VL M + PN T L+H +++
Sbjct: 390 GLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKE 449
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+A +LL ER + CNT++ L +A I+ M RG S++
Sbjct: 450 GRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRG----SASL 505
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ D+ + P TY ++ L K GR E + L +
Sbjct: 506 GNLGNSFIDLFDIRNN--------GKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIG 557
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+L + ++ I +CK + A + +EM + +L T+N+LI G + ++ +
Sbjct: 558 KKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFE 617
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
L+ + E G P+ +T+N++I CL + +DA L EM++ G+ PN T+ ILI
Sbjct: 618 IYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIG 677
Query: 369 SLCAIGDVARSLRLFQ---KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+ D + LF+ + + S + FN L+ + KA++ F + L
Sbjct: 678 AFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLAG----GETLKAKELFEAALDRS 733
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSM--EQNGCNPDSYTSNLILETLVQQGRFEE 483
L NF Y LI+ L K G+ D+A M +Q +P S+ +++ L ++G
Sbjct: 734 LALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMP--VIDELGKRGSKHA 791
Query: 484 AHDIVKTSKE 493
A + + E
Sbjct: 792 ADEFAERMME 801
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 128/527 (24%), Positives = 227/527 (43%), Gaps = 35/527 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN VI +L A ++M PD T+N I +C+ G + EA
Sbjct: 218 GALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEA 277
Query: 65 LRLVKQM---EGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
R+ + M E +G PN TY ++++GFC+ E + + MK ++RS
Sbjct: 278 SRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETL----SLRS 333
Query: 121 ---LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
+ G+ R +A +L E+ N L++ L M S+A +IL M
Sbjct: 334 YNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMR 393
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
+ G P++ T+ + + E +L I+ G P T +L+ +L+K GR
Sbjct: 394 ESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRAS 453
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA---------- 287
E + L + + + + N +I+ CK +D+A EI M R A
Sbjct: 454 EAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFI 513
Query: 288 -------------PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
P+ +T+ T+I G CK V + ++ L+ ++ PD F++ I
Sbjct: 514 DLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYN 573
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
C+ + A L EM + G + TYN LI+ L + + L +M+ I P+
Sbjct: 574 YCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPN 633
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+YT+N +I K++ A ML G+ P+ +++ LI A K+ F A++ F
Sbjct: 634 VYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELF- 692
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ + C + + L+ G +A ++ + + +R ++ K+F
Sbjct: 693 EIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNF 739
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 156/375 (41%), Gaps = 30/375 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P T Y+ ++ + I A ++M C P+ +T NIL+H + + G EA
Sbjct: 396 GVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEA 455
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC------------ 112
L++ M GY + T +I+G C A + + ++ M R
Sbjct: 456 EDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDL 515
Query: 113 -----------PNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
P+ T +++ G+ + +A + L+ + ++ L+ +T +Y
Sbjct: 516 FDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYC 575
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
S A +L++M +G T++ + L + + E G++D +RG+ P
Sbjct: 576 KQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVY 635
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF---CKVNMMDRATEIC 278
TY ++ L + G+ + L+ + + + N+ ++ ++I F C EI
Sbjct: 636 TYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIA 695
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
+ + FN L++G E K +EL L+ F + +I+ LC+
Sbjct: 696 LSLCGHKESLYSFMFNELLAG----GETLKAKELFEAALDRSLALKNFLYRDLIEKLCKD 751
Query: 339 HRFEDALDCLSEMVE 353
+ +DA L +M++
Sbjct: 752 GKLDDASFILHKMMD 766
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 156/374 (41%), Gaps = 26/374 (6%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P+ N ++ +L K A Q M+ D T N +I+G+C+ G +D+
Sbjct: 430 VGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDK 489
Query: 64 ALRLVKQMEGLGYA-----------------------PNVYTYTILIDGFCNAKRVAEVF 100
A+ +V M G A P+ TY +I G C RV E
Sbjct: 490 AIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAK 549
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL-VCNTLLYR 159
+ L M + + P+ + ++ + AF +L + ME++ + L N+L+
Sbjct: 550 KKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVL-KEMEKKGCNKSLRTYNSLIQG 608
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
L + + E ++ +M +RG P T++ ++CL G L + +LD +++G+ P
Sbjct: 609 LGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPN 668
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
T+ +L+ A +KA D + L + + Y+ + + +A E+
Sbjct: 669 IYTFRILIGAFFKAC-DFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFE 727
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
DR +A + LI CKD ++ +L +++ + D +F +ID L +
Sbjct: 728 AALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRG 787
Query: 340 RFEDALDCLSEMVE 353
A + M+E
Sbjct: 788 SKHAADEFAERMME 801
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%)
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
PP YN+L R V + L++ M R+ P YTFN LI + C M +E A +
Sbjct: 115 PPPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENARE 174
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
F M G +P+ FS L++ ++G M +G P+ N ++ +L
Sbjct: 175 VFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLC 234
Query: 477 QQGRFEEAHDIVKTSKERGIS 497
+G+ EA +V+ +E G+S
Sbjct: 235 GEGQTVEAEKLVEKMREVGLS 255
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/504 (24%), Positives = 231/504 (45%), Gaps = 42/504 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD--QCKPDRFTYNILIHGICRI 58
+S LG P+ Y+ ++ L ++ A FQ M+ + C P+ YN +IHG +
Sbjct: 219 MSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKE 278
Query: 59 GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
G +A L +M G P+V TY ++ID C A+ + + VL M P+ T
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTY 338
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
++HG +A ++ + R + ++CN+ L L + + EAA I M
Sbjct: 339 NCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTA 398
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+G+ P D+ C +L + G + M L+
Sbjct: 399 KGHKP----------------DIVSYCTLLHGYASEG-------WFADMIGLF------- 428
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
N + + + ++ +N++I + K M+D A I EM+ + ++P++VT++T+IS
Sbjct: 429 -----NSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVIS 483
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP- 357
+ + E ++ G +P+ ++S+I C A + +SEM+ G+P
Sbjct: 484 AFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPR 543
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P+ + +N +I SLC G V + +F + PD+ TF +LI +C + K++KA K
Sbjct: 544 PDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKI 603
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
+M +G+ D +YS L+ K+GR ++ F M++ G P++ T ++L L +
Sbjct: 604 LDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFR 663
Query: 478 QGRFEEA----HDIVKTSKERGIS 497
GR A H+++++ +S
Sbjct: 664 AGRTVAARKKFHEMIESGTTVTVS 687
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 126/519 (24%), Positives = 230/519 (44%), Gaps = 38/519 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN +IDAL K+ ++D A L +QM+ + +PD TYN +IHG +G + EA
Sbjct: 295 GVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEA 354
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ ++M+ G PN+ + C R E + + M + P+ + +L+HG
Sbjct: 355 AKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHG 414
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKL-VCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ L M+ + V N L++ + M +A I +M +G P
Sbjct: 415 -YASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSP 473
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG---- 239
+ T+ ++ L + + + RG++P + Y +++ G V+
Sbjct: 474 DVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELV 533
Query: 240 ----------------DRYLNHVFKDRLV----------------SNVNSYNMVIDCFCK 267
+ +N + KD V +V ++ +ID +C
Sbjct: 534 SEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCL 593
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
V MD+A +I M + ++VT++TL+ G+ K+ ++ L + G KP+ T
Sbjct: 594 VGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVT 653
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+ M+ L RA R A EM+E G Y I++ LC ++ LFQK+
Sbjct: 654 YGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLG 713
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ I N +I + ++ + E+A++ F ++ GL P+ +Y +I L+K G +
Sbjct: 714 TMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVE 773
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+A F SME++G P S N I+ L+++G +A +
Sbjct: 774 DANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGN 812
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 145/289 (50%), Gaps = 3/289 (1%)
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD-RLVSNVNSYNMVIDCFCKVNM 270
++ G+K T L++ L A R E L H + V NV SY++++ C +M
Sbjct: 184 LRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSM 243
Query: 271 MDRATEICREMRDRDIA--PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
RA ++ + M A PN+V +NT+I G K+ E K L + G KPD T+
Sbjct: 244 SQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTY 303
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N +ID LC+A + A L +M G P+T+TYN +I +G + + ++F+KM++
Sbjct: 304 NLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKS 363
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ P+I N+ + S C+ + ++A + F SM G +PD SY L+ G F +
Sbjct: 364 RGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFAD 423
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
F SM+ NG D N+++ ++G ++A I +++G+S
Sbjct: 424 MIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVS 472
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 184/416 (44%), Gaps = 7/416 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ R++N +I A K +D A L F +M PD TY+ +I R+G + +A
Sbjct: 435 GIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDA 494
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVH 123
+ QM G PN Y +I GFC + + ++ M + + P+ S+++
Sbjct: 495 MEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVIN 554
Query: 124 GV---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ R +D H F+L+ ER + + +L+ +A IL M G
Sbjct: 555 SLCKDGRVMDAHDIFDLVTDIGERPDV---ITFTSLIDGYCLVGKMDKAFKILDAMEVVG 611
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ T+ + +N+ + ++GVKP TY +++ L++AGR V
Sbjct: 612 VETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAAR 671
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + + V+ Y +++ C+ N D A + +++ ++ ++ NT+I+
Sbjct: 672 KKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAM 731
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K + +EL + G P++ T+ MI L + EDA + S M + G+ P +
Sbjct: 732 YKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGS 791
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
N +IR L G++A++ K+ RI + T + ++ F R K + K
Sbjct: 792 RLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMK 847
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 191/439 (43%), Gaps = 47/439 (10%)
Query: 66 RLVKQMEGLGYAP-NVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R+ ++ G P V+TY+IL+D C A+R P+ V
Sbjct: 142 RVCREQAGPRVVPLTVHTYSILMDCCCRARR-----------------PDLGLV------ 178
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA-AILRKMGDRGYLP 183
+F C+ + ++ +TLL L + EA +L +M + G +P
Sbjct: 179 LFGCI------------LRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVP 226
Query: 184 ESSTFDYTVTCLVTGL-DLNETCGILDTF---IKRG--VKPRFSTYLLLMEALYKAGRDV 237
+ F Y++ ++ GL D + + LD F K G P Y ++ +K G
Sbjct: 227 --NVFSYSI--ILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETG 282
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ + + + + +V +YN++ID CK MD+A + R+M P+ VT+N +I
Sbjct: 283 KACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMI 342
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G+ + + ++ + G P+ NS + LC+ R ++A + M G
Sbjct: 343 HGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHK 402
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P+ ++Y L+ + G A + LF M+++ I+ D FN LI ++ + ++ A
Sbjct: 403 PDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLI 462
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F M G+ PD +YS +I A + GR +A + F M G P++ + I++
Sbjct: 463 FTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCM 522
Query: 478 QGRFEEAHDIVKTSKERGI 496
G +A ++V +GI
Sbjct: 523 HGGLVKAKELVSEMINKGI 541
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/264 (19%), Positives = 101/264 (38%), Gaps = 35/264 (13%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ Y+ ++D K+ I+ F++M KP+ TY I++ G+ R G
Sbjct: 610 VGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVA 669
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + +M G V Y I++ G C RN C +EA +
Sbjct: 670 ARKKFHEMIESGTTVTVSIYGIILGGLC-----------------RNNCADEAII----- 707
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
F+ L + +T + NT++ + EA + + G LP
Sbjct: 708 ----------LFQKLGTMNVKFSIT---ILNTMINAMYKVQRKEEAKELFATISASGLLP 754
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
ST+ + L+ + + + + K G+ P ++ L + G + YL
Sbjct: 755 NESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYL 814
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCK 267
+ V R++ ++ ++++ F +
Sbjct: 815 SKVDGKRILLEASTTSLMLSLFSR 838
>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
Length = 792
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 207/477 (43%), Gaps = 36/477 (7%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F ++ D P TY +LI G G+ DE +L +QM G P+ Y + ++I G
Sbjct: 314 FDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLR 373
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
KR + +L+++ + V P+ T L+H + + H+A L + E +
Sbjct: 374 DKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVT 432
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
++LL EA + +M D+G+ P T+ + + + +L+
Sbjct: 433 YHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMR 492
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+ GV TY +L+ LY R E D L + V +YN +I+ F K MM
Sbjct: 493 QNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMG 552
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + R+MR + I PN+VT+ + I G+C+ +LL+ + G +PD +N+ I
Sbjct: 553 SAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFI 612
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYN---------------------------- 364
D C+ AL L +++ G+ P+ YN
Sbjct: 613 DTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVV 672
Query: 365 -------ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
LI +G+VA +L L+ +M A+ + PD TF AL CR I+ A++
Sbjct: 673 ADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRL 732
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
M L + P+ +Y+ LI A ++ G+ EA Q M +G PD T +++ T
Sbjct: 733 LDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDILPRT 789
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 209/466 (44%), Gaps = 2/466 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G ++Y+ VI A V+ A F +M+ KPD Y I I G+C++ D A
Sbjct: 180 GCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRA 239
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS-LVH 123
L+++ +M G+ P TY+ ++D +R+ E R+ + M + + + L+H
Sbjct: 240 LQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMH 299
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + KA +L + + L+ M E + R+M ++G LP
Sbjct: 300 GYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLP 359
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ F+ + L+ + G+L + GV P TY L+ L K + E
Sbjct: 360 STYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLW 418
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + + ++ +Y+ ++ +C+ MD A ++ EM D+ PN VT+ TL+ G+ K
Sbjct: 419 DKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKK 478
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
LL + + G +T+N +I+ L +R + + L + G P T+TY
Sbjct: 479 KAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTY 538
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N +I G + + ++++M+ I+P+I T+ + I +CR N + A K +
Sbjct: 539 NSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRR 598
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
G++PD +Y+A I K G A + + ++G PD N
Sbjct: 599 DGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYN 644
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/522 (23%), Positives = 223/522 (42%), Gaps = 42/522 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAY-LKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P Y++V+D LVK +D A LK Q + K D +L+HG C G V +
Sbjct: 250 GFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGK 309
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVA-EVFRVLEIMKERNVCPNEATVRSLV 122
AL L ++ G P TY +LI G C+A+ + E +++ M E+ + P+ ++
Sbjct: 310 ALDLFDEVVSDGVTPTNVTYGVLIKG-CDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVI 368
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ R A LL + + + L++ L + EA + KM + G
Sbjct: 369 KGLLRDKRWKDAIGLL-KLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVK 427
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T+ + ++E + +G P TY LM+ K
Sbjct: 428 PSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYAL 487
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
LN + ++ + +YN++I+ VN + E+ + P +T+N++I+G K
Sbjct: 488 LNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVK 547
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + + G P+ T+ S ID CR + + A+ L + G+ P+
Sbjct: 548 AGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAA 607
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN I + C G+++R+L + D ++PD+ +N+ + + + + +A K ++SM+
Sbjct: 608 YNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMI 667
Query: 423 ------------TL-----------------------GLRPDNFSYSALIKALIKSGRFD 447
TL + PD+ +++AL L +SG D
Sbjct: 668 KQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDID 727
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA---HD 486
AK+ M + +P+ T N+++ V+ G+ +EA HD
Sbjct: 728 GAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHD 769
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 153/386 (39%), Gaps = 72/386 (18%)
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
+M RG +P++ + + G + + D +G Y +++ A + G
Sbjct: 140 RMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGG 199
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
+ R + + + + Y + I CK+ DRA ++ +MR+ P +T++
Sbjct: 200 MHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYS 259
Query: 295 T------------------------------------LISGHCKDAEVHK---------- 308
+ L+ G+C + EV K
Sbjct: 260 SVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVS 319
Query: 309 -------------------------TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
T +L ++E G P + FN +I L R R++D
Sbjct: 320 DGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKD 379
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A+ L +V+ GV P+ TY LI LC + ++ L+ KM+ + P I T+++L+
Sbjct: 380 AIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLL 438
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+C ++++A K + M G P+ +Y+ L+K IK FD A M QNG +
Sbjct: 439 GYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSC 498
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVK 489
YT N+++ L R E +++K
Sbjct: 499 GDYTYNILINGLYMVNRVCEVDEMLK 524
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 135/491 (27%), Positives = 217/491 (44%), Gaps = 12/491 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S YNA++D KS+ A +M ++ P TYN LI R G++DEA
Sbjct: 309 GFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEA 368
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV-- 122
+ L QM G P+V+TYT L+ GF A +V + E M+ PN T + +
Sbjct: 369 MELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKM 428
Query: 123 ---HGVFRCLDPHKAF-ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
G F +D K F E+ + + + +T NTLL N M SE + + ++M
Sbjct: 429 YGNRGKF--VDMMKIFDEINVCGLSPDIVT----WNTLLAVFGQNGMDSEVSGVFKEMKR 482
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G++PE TF+ ++ + + + GV P STY ++ AL + G +
Sbjct: 483 AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQ 542
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
++ L + R N +Y ++ + + + E+ I P V TL+
Sbjct: 543 SEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVL 602
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
K + + L E GF PD T NSM+ R A + L M E G P
Sbjct: 603 VCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTP 662
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ TYN L+ D +S + +++ A I PDI ++N +I ++CR ++ A + F
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIF 722
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M G+ PD +Y+ I + F+EA M ++GC P+ T N I++ +
Sbjct: 723 SEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKL 782
Query: 479 GRFEEAHDIVK 489
R +EA V+
Sbjct: 783 NRKDEAKLFVE 793
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 120/533 (22%), Positives = 230/533 (43%), Gaps = 46/533 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV-VDE 63
G S Y ++I A S A F++M + CKP TYN++++ ++G ++
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
LV++M+ G AP+ YTY LI E +V E MK ++ T +L+
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLD 322
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ P +A ++L ME + +V N+L+ + + M EA + +M ++G
Sbjct: 323 VYGKSHRPKEAMKVLNE-MELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK 381
Query: 183 PESSTFDYTVTCLVTGLD----LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
P+ +T T L++G + + I + G KP T+ ++ G+ V+
Sbjct: 382 PDV----FTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVD 437
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + L ++ ++N ++ F + M + + +EM+ P TFNTLIS
Sbjct: 438 MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLIS 497
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
+ + + + +L+ G PD T+N+++ L R +E + L+EM + P
Sbjct: 498 AYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKP 557
Query: 359 NTITY-------------------------------NILIRSL---CAIGD-VARSLRLF 383
N +TY +L+++L C+ D + + R F
Sbjct: 558 NELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAF 617
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+++ SPDI T N+++ + R + KA + M G P +Y++L+ +S
Sbjct: 618 SELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRS 677
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
F ++++ + G PD + N ++ + R +A I ++ GI
Sbjct: 678 ADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGI 730
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 189/439 (43%), Gaps = 34/439 (7%)
Query: 29 AYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILID 88
A+ F + Q D I+I + + G V A L ++ G++ +VY+YT LI
Sbjct: 157 AFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLIS 216
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
F N+ R E V + M+E P T +++ + P
Sbjct: 217 AFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPW---------------- 260
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
++ +++ KM G P++ T++ +TC G E +
Sbjct: 261 ------------------NKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVF 302
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ G TY L++ K+ R E + LN + + ++ +YN +I + +
Sbjct: 303 EEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARD 362
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
M+D A E+ +M ++ P++ T+ TL+SG + +V + + G KP+ TF
Sbjct: 363 GMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTF 422
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N+ I +F D + E+ G+ P+ +T+N L+ G + +F++M+
Sbjct: 423 NAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 482
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
P+ TFN LI ++ R E+A + ML G+ PD +Y+ ++ AL + G +++
Sbjct: 483 AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQ 542
Query: 449 AKQTFLSMEQNGCNPDSYT 467
+++ ME C P+ T
Sbjct: 543 SEKVLAEMEDGRCKPNELT 561
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/483 (21%), Positives = 207/483 (42%), Gaps = 1/483 (0%)
Query: 16 VIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLG 75
VI L K + A F + D D ++Y LI G EA+ + K+ME G
Sbjct: 179 VISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEG 238
Query: 76 YAPNVYTYTILIDGFCN-AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
P + TY ++++ F ++ ++E MK + P+ T +L+ R +A
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
++ K+ N LL + EA +L +M G+ P T++ ++
Sbjct: 299 AQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISA 358
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
L+E + + ++G KP TY L+ +AG+ + N
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPN 418
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
+ ++N I + +I E+ ++P++VT+NTL++ ++ + +
Sbjct: 419 ICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
+ GF P++ TFN++I R FE A+ M++ GV P+ TYN ++ +L G
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
+S ++ +M+ R P+ T+ +L+ ++ +I + + + P
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK 598
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
L+ K EA++ F +++ G +PD T N ++ ++ +A++++ KER
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKER 658
Query: 495 GIS 497
G +
Sbjct: 659 GFT 661
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 162/368 (44%), Gaps = 7/368 (1%)
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
AF+ ++ + + + V ++ L S AA + + + G+ + ++ ++
Sbjct: 157 AFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLIS 216
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK-DRLV 252
E + + G KP TY +++ K G L K D +
Sbjct: 217 AFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIA 276
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+ +YN +I C + ++ A ++ EM+ + + VT+N L+ + K H+ +E
Sbjct: 277 PDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKS---HRPKEA 333
Query: 313 LVMLLEC---GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+ +L E GF P T+NS+I R ++A++ ++M E G P+ TY L+
Sbjct: 334 MKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
G V ++ +F++M+ P+I TFNA I+ + K K F + GL PD
Sbjct: 394 FERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPD 453
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+++ L+ ++G E F M++ G P+ T N ++ + G FE+A + +
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Query: 490 TSKERGIS 497
+ G++
Sbjct: 514 RMLDAGVT 521
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 124/316 (39%), Gaps = 70/316 (22%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICR------- 57
G++P YN V+ AL + + + +M +CKP+ TY L+H
Sbjct: 519 GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLM 578
Query: 58 --------IGVVD--------------------EALRLVKQMEGLGYAPNVYTYTILIDG 89
GV++ EA R +++ G++P++ T ++
Sbjct: 579 HSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSI 638
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
+ + V + VL+ MKER P+ AT SL++ R D K+ E+L + +
Sbjct: 639 YGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ NT++Y N+ +A+ I +M D G +P+ T++ + E G++
Sbjct: 699 IISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVR 758
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
IK G +P N N+YN ++D +CK+N
Sbjct: 759 YMIKHGCRP-----------------------------------NQNTYNSIVDGYCKLN 783
Query: 270 MMDRATEICREMRDRD 285
D A ++R+ D
Sbjct: 784 RKDEAKLFVEDLRNLD 799
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 56/140 (40%), Gaps = 20/140 (14%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P YN VI A ++ + A F +M PD TYN I + +EA
Sbjct: 694 GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEA 753
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +V+ M G PN TY ++DG+C R E +E +
Sbjct: 754 IGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL------------------ 795
Query: 125 VFRCLDPHKAFELLIRFMER 144
R LDPH +R +ER
Sbjct: 796 --RNLDPHAPKGEDLRLLER 813
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 121/485 (24%), Positives = 221/485 (45%), Gaps = 5/485 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ YN ++ + K + A +M C P T+N+LI+G+ + G + +A
Sbjct: 232 GIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQA 291
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+++M G + YTY LI G+C + E + E M R V P A+ ++++G
Sbjct: 292 KGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYG 351
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A + L +++ + + NTL+Y EA +L ++ R
Sbjct: 352 FCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFN 411
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L DL + + I RG+ P TY +L+ K G + + +
Sbjct: 412 IVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFD 471
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L + +Y I K+ +A ++ EM + P+++T+N ++G CK
Sbjct: 472 EMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLG 531
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + ELL ++ G PD T+ S + + + +M+ G P +TY
Sbjct: 532 NLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYT 591
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI + G + ++ F +MQ + P++ T+N LI FC++ K+++A K F M
Sbjct: 592 VLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEK 651
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL-----VQQG 479
G+ P+ ++Y+ LI G++ EA + + M PDS T +L+ L VQ
Sbjct: 652 GIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQAV 711
Query: 480 RFEEA 484
+F E+
Sbjct: 712 QFIES 716
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 219/482 (45%)
Query: 15 AVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGL 74
++D L+ L F++M ++ PD N ++ + ++ +AL + + M
Sbjct: 172 GIVDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEY 231
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
G P V TY ++ FC V ++ M+ER P+E T L++G+ + + +A
Sbjct: 232 GIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQA 291
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
L+ + N L+ + EA A+ +M RG P ++ + +
Sbjct: 292 KGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYG 351
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
+++ L +K+ + P +Y L+ + G E L+ + L N
Sbjct: 352 FCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFN 411
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
+ +YN +ID C++ ++ A ++ +M +R I P++VT+ L++G CK + +E
Sbjct: 412 IVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFD 471
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
+L G PD+F + + I + A EM+ G PP+ ITYN+ + LC +G
Sbjct: 472 EMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLG 531
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
++ + L QKM D PD T+ + + + + + + F+ ML+ G P +Y+
Sbjct: 532 NLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYT 591
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
LI A +GR D A FL M++ G P+ T N+++ + + ++A +E+
Sbjct: 592 VLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEK 651
Query: 495 GI 496
GI
Sbjct: 652 GI 653
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 153/343 (44%), Gaps = 37/343 (10%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ-CKPDRFTYNILIHGICRIG 59
+ F +S + YN +ID L + ++ A LK ++ +++ PD TY +L++G C++G
Sbjct: 403 LRFRNLSFNIVTYNTLIDGLCRLGDLETA-LKLKEDMINRGIHPDVVTYTVLVNGACKLG 461
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+ A +M +G AP+ + YT I G A+ F++ E M + P+ T
Sbjct: 462 NMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYN 521
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
V+G L +L N EA +L+KM
Sbjct: 522 VFVNG--------------------------------LCKLGN---LEEAGELLQKMIRD 546
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G++P+ T+ + + L E I + RG P TY +L+ A GR
Sbjct: 547 GHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWA 606
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
Y + + +V NV +YN++I+ FCKV MD+A + EM+++ I PN T+ LI+
Sbjct: 607 MAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINE 666
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+C + + L +L +PD T +++ L + ++ +
Sbjct: 667 NCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQ 709
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 4/193 (2%)
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
K E+ M+ E G +P T+N+M+ C+ + ALD + +M E G P+ +T+N+LI
Sbjct: 220 KALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLI 279
Query: 368 RSLCAIGDVARSLRLFQKMQAD--RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L G++ ++ L Q+M R+SP YT+N LI +C+ + +A + M+T G
Sbjct: 280 NGLSKKGELQQAKGLIQEMAKAGLRVSP--YTYNPLICGYCKKGLLVEALALWEEMVTRG 337
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ P S++ ++ K G+ +A+Q M + PD + N ++ + G EA
Sbjct: 338 VSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAF 397
Query: 486 DIVKTSKERGISF 498
++ + R +SF
Sbjct: 398 ILLDELRFRNLSF 410
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%)
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
F ++D L + L +M+ P+ N +++ L + ++L +++
Sbjct: 168 FEMYGIVDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRM 227
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M I P + T+N ++ SFC+ ++++A M G P +++ LI L K G
Sbjct: 228 MGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGE 287
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+AK M + G YT N ++ ++G EA + + RG+S
Sbjct: 288 LQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVS 339
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/499 (25%), Positives = 239/499 (47%), Gaps = 14/499 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L + P+TR N ++ L + S +LA+ F+Q+ P+ FT+NI+I +C+ G + E
Sbjct: 157 LRVPPNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNIMIDFLCKEGDLAE 212
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+ +M+ +G +P+V TY LIDG+ + EV +++ M+ P+ T +LV+
Sbjct: 213 ARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVN 272
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ +A+ M+RE + +V +T + N M EA + +M +G
Sbjct: 273 CFCKFGRMERAYSYFAE-MKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMK 331
Query: 183 PESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
P T+ TCLV G L++ + + +++GV TY +L++ L K G+ E
Sbjct: 332 PNEVTY----TCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAE 387
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + + +N Y +I +RA + EM+D+ + ++ + LI
Sbjct: 388 AEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIW 447
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G C ++ + + LL + ECG KP+ + +++D +A + +A+ L +M++ G P
Sbjct: 448 GLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRP 507
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N +TY L+ LC G + ++ F KM + P++ + AL+ C+ +++KA
Sbjct: 508 NIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLL 567
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M+ G+ DN ++L+ +K G +A M +G D Y +
Sbjct: 568 DEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNL 627
Query: 479 GRFEEAHDIVKTSKERGIS 497
+EA +++ E GI+
Sbjct: 628 NMIQEAREVLSEMIENGIT 646
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 181/384 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ + ++ +DA K+ + A F QM + KP+ TY L+ G C+ G +D+A
Sbjct: 294 GVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDA 353
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M G NV TYT+L+DG C +VAE V +M+ + NE +L+HG
Sbjct: 354 LVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHG 413
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F + +A LL ++ + L++ L N EA ++L KM + G P
Sbjct: 414 HFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPN 473
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + +E +L + G +P TY L++ L KAG E + N
Sbjct: 474 NVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFN 533
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L NV +Y ++D CK +D+A + EM D+ ++ + V +L+ GH K
Sbjct: 534 KMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQG 593
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ L ++ G + D + + + C + ++A + LSEM+E G+ P+ + YN
Sbjct: 594 NLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYN 653
Query: 365 ILIRSLCAIGDVARSLRLFQKMQA 388
LI +G++ + L +M++
Sbjct: 654 CLINKCQKLGNMEEAAILQNEMES 677
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 170/399 (42%), Gaps = 66/399 (16%)
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLV--------------- 196
V +TLL L++ + +A L ++ + P + T ++ + CL
Sbjct: 130 VVDTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQL 189
Query: 197 ----------------TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
DL E +L G P TY L++ K G E +
Sbjct: 190 PAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVE 249
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + +V +YN +++CFCK M+RA EM+ + N+VTF+T +
Sbjct: 250 KLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAF 309
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ V + +L + G KP++ T+ ++D C+A R +DAL +EMV+ GVP N
Sbjct: 310 CKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNV 369
Query: 361 ITYNILIRSLCAIGDVA-----------------------------------RSLRLFQK 385
+TY +L+ LC G VA R+L L +
Sbjct: 370 VTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSE 429
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M+ + D+ + ALI C + K+++A+ M GL+P+N Y+ ++ A K+ +
Sbjct: 430 MKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARK 489
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
EA M +G P+ T +++ L + G +EA
Sbjct: 490 ESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEA 528
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 35/212 (16%)
Query: 320 GFKPDKFTFNSMIDCLCR--AHR--FEDALDCLSEMVEWGVPPNTI-------------- 361
P + S++D L A R +DA+ L+ + E VPPNT
Sbjct: 119 ALGPRRSALPSVVDTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERS 178
Query: 362 -----------------TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
T+NI+I LC GD+A + L +M+A SPD+ T+N+LI
Sbjct: 179 SELAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDG 238
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+ + ++E+ EK M G RPD +Y+AL+ K GR + A F M++ G +
Sbjct: 239 YGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMAN 298
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
T + ++ + G EA + + +G+
Sbjct: 299 VVTFSTFVDAFCKNGMVREAMKLFAQMRMKGM 330
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ + Y A++D L K+ +D A L +M D L+ G + G + +
Sbjct: 538 LGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQD 597
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L +M G ++Y YT + GFCN + E VL M E + P+ L++
Sbjct: 598 AFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLIN 657
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 195/407 (47%), Gaps = 7/407 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ ISP+ +N VI AL K +D A F+ M +C PD +TY L+ G+C+ +DE
Sbjct: 181 MNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+ +M+ G +P+ Y +LIDG C ++ V ++++ M + PNE T +L+H
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIH 300
Query: 124 GVFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
G+ CL KA LL R + + + + TL+ L A + A +L M +RGY
Sbjct: 301 GL--CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGY 358
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+ ++ L E + ++G +P Y +++ L + G+ E
Sbjct: 359 RLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKE 418
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
LN + + NV +Y+ ++ F K + + A ++ REM + + N ++ LI G C
Sbjct: 419 ILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLC 478
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP---P 358
V + + +L G KPD ++SMI LC + AL EM+ P P
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+ +TYNIL+ LC DV+R++ L M PD+ T N + +
Sbjct: 539 DVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTL 585
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 197/439 (44%), Gaps = 38/439 (8%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P+ ++N++I +C++G VD A+ + + M P+ YTY L+DG C +R+ E +
Sbjct: 185 PNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLL 244
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
L+ M+ P+ L+ G+ + D + KLV N L
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLSR--------------VTKLVDNMFL----- 285
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+G P T++ + L L++ +L+ + P T
Sbjct: 286 ----------------KGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVT 329
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y L+ L K R ++G R L + + N + Y+++I K + A + ++M
Sbjct: 330 YGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMA 389
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
++ PN+V ++ +I G C++ + ++ +E+L ++ G P+ +T++S++ + E
Sbjct: 390 EKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSE 449
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+A+ EM E G N Y++LI LC +G V ++ ++ KM I PD ++++I
Sbjct: 450 EAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMI 509
Query: 403 QSFCRMNKIEKAEKAFFSMLTL---GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
+ C + ++ A K + ML +PD +Y+ L+ L A M
Sbjct: 510 KGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDR 569
Query: 460 GCNPDSYTSNLILETLVQQ 478
GC+PD T N L TL ++
Sbjct: 570 GCDPDVITCNTFLNTLSEK 588
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 184/432 (42%), Gaps = 26/432 (6%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P Y ++D L K ID A L +M + C P YN+LI G+C+ G + +L
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKL 279
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
V M G PN TY LI G C ++ + +LE M PN+ T +L++G+ +
Sbjct: 280 VDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK 339
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
LLI ER + + + L+ L A EA + +KM ++G P
Sbjct: 340 QRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVV 399
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + L NE IL+ I G P TY LM+ +K G E + +
Sbjct: 400 YSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMD 459
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK----D 303
+ N Y+++ID C V + A + +M I P+ V ++++I G C D
Sbjct: 460 ETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMD 519
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
A + E+L E +PD T+N ++D LC A+D L+ M++ G P+ IT
Sbjct: 520 AALKLYHEMLCQ-EEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITC 578
Query: 364 NILIRSLCAIGD------------VARSL---------RLFQKMQADRISPDIYTFNALI 402
N + +L D VAR L ++ + M ++P T+ ++
Sbjct: 579 NTFLNTLSEKSDSCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIV 638
Query: 403 QSFCRMNKIEKA 414
C+ KI A
Sbjct: 639 PEICKPKKINAA 650
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 175/389 (44%), Gaps = 3/389 (0%)
Query: 110 NVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEA 169
N+ PN + ++ + + +A E+ E++ L TL+ L EA
Sbjct: 182 NISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 170 AAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEA 229
+L +M G P ++ + L DL+ ++D +G P TY L+
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHG 301
Query: 230 LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
L G+ + L + + + N +Y +I+ K + M +R N
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLN 361
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
++ LISG K+ + + L + E G +P+ ++++ID LCR + +A + L+
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILN 421
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
M+ G PN TY+ L++ G +++++++M S + + ++ LI C +
Sbjct: 422 GMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVG 481
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM---EQNGCNPDSY 466
++++A + MLT+G++PD +YS++IK L G D A + + M E+ PD
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV 541
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERG 495
T N++L+ L Q A D++ +RG
Sbjct: 542 TYNILLDGLCMQKDVSRAVDLLNCMLDRG 570
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 139/285 (48%), Gaps = 5/285 (1%)
Query: 207 ILDTF-IKRGVKPRFSTYL--LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
++D F KR VK F++ L ++ E LY G + D +N + N S+N+VI
Sbjct: 138 MVDEFRCKRSVK-SFNSVLNVIINEGLYHRGLEFY-DYVVNSNMNMNISPNGLSFNLVIK 195
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
CK+ +DRA E+ R M ++ P+ T+ TL+ G CK+ + + LL + G P
Sbjct: 196 ALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSP 255
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
+N +ID LC+ + M G PN +TYN LI LC G + +++ L
Sbjct: 256 SPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLL 315
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
++M + + P+ T+ LI + + + SM G R + YS LI L K
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKE 375
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
G+ +EA + M + GC P+ + +++ L ++G+ EA +I+
Sbjct: 376 GKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEIL 420
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 139/295 (47%)
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
++++ + + P ++ L+++AL K G + + + + + +Y ++D C
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLC 233
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K +D A + EM+ +P+ V +N LI G CK ++ + +L+ + G P++
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEV 293
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+N++I LC + + A+ L MV PN +TY LI L RL M
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISM 353
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ + + ++ LI + K E+A + M G RP+ YSA+I L + G+
Sbjct: 354 EERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKP 413
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+EAK+ M +GC P+ YT + +++ + G EEA + + E G S F
Sbjct: 414 NEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEF 468
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 201/443 (45%), Gaps = 38/443 (8%)
Query: 46 FTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEI 105
YN ++ G C G +D A RLV +M P+ YTY LI G C R A VL+
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 106 MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSM 165
M R P+ T L+ + S
Sbjct: 58 MLRRRCVPDVVTYTILLEATCK-----------------------------------RSG 82
Query: 166 ASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLL 225
+A +L +M D+G P+ T++ V + +++ L G +P +Y +
Sbjct: 83 YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 142
Query: 226 LMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
+++ L A R + + + + + NV ++NM+I C+ +++ A E+ ++
Sbjct: 143 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 202
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
PN +++N L+ CK ++ K L +++ G PD ++N+++ LCR+ + A+
Sbjct: 203 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 262
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+ L ++ + G P I+YN +I L G +L L +M + + PDI T++ +
Sbjct: 263 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 322
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
CR ++IE A +AF + +G+RP+ Y+A+I L K A F M NGC P+
Sbjct: 323 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNE 382
Query: 466 YTSNLILETLVQQGRFEEAHDIV 488
T +++E L +G +EA D++
Sbjct: 383 STYTILIEGLAYEGLIKEARDLL 405
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 156/282 (55%)
Query: 216 VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT 275
V+P TY L+ L GR L+ + + R V +V +Y ++++ CK + +A
Sbjct: 28 VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAM 87
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
++ EMRD+ P++VT+N +++G C++ V E L L G +P+ ++N ++ L
Sbjct: 88 KLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 147
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
C A R+EDA + + EM + G PPN +T+N+LI LC G V +L + +++ +P+
Sbjct: 148 CTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNS 207
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
++N L+ +FC+ K++KA M++ G PD SY+ L+ AL +SG D A +
Sbjct: 208 LSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 267
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
++ GC P + N +++ L + G+ +EA +++ +G+
Sbjct: 268 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQ 309
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 170/380 (44%), Gaps = 37/380 (9%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P Y +++A K + A +M C PD TYN++++GIC+ G VD+A+
Sbjct: 65 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 124
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+K + G PN +Y I++ G C A+R + ++ M ++ PN T
Sbjct: 125 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT---------- 174
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
F +LI F+ R+ L + A +L ++ G P S +
Sbjct: 175 -------FNMLISFLCRKGLVEP------------------ALEVLEQIPKYGCTPNSLS 209
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + +++ LD + RG P +Y L+ AL ++G +V+ L H
Sbjct: 210 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSG-EVDVAVELLHQL 268
Query: 248 KDRLVSNV-NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
KD+ + V SYN VID K A E+ EM + + P+++T++T+ +G C++ +
Sbjct: 269 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 328
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ + G +P+ +N++I LC+ A+D + M+ G PN TY IL
Sbjct: 329 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 388
Query: 367 IRSLCAIGDVARSLRLFQKM 386
I L G + + L ++
Sbjct: 389 IEGLAYEGLIKEARDLLDEL 408
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 115/211 (54%), Gaps = 3/211 (1%)
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
+ +N +++G+C ++ R L+ E +PD +T+N++I LC R +AL L E
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVA---EMPVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M+ P+ +TY IL+ + C ++++L +M+ +PDI T+N ++ C+ +
Sbjct: 58 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
++ A + ++ + G P+ SY+ ++K L + R+++A++ M Q GC P+ T N+
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177
Query: 471 ILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
++ L ++G E A ++++ + G + S
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSL 208
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 143/347 (41%), Gaps = 35/347 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P YN V++ + + +D A + + C+P+ +YNI++ G+C ++A
Sbjct: 97 GCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDA 156
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M G PNV T+ +LI C V VLE + + PN + L+H
Sbjct: 157 EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHA 216
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KA L + R + NTLL L + A +L ++ D+G P
Sbjct: 217 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 276
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+++ + L E +L+ + +G++P TY + L +
Sbjct: 277 LISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR------------ 324
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+DR+ + ++ V +D I PN V +N +I G CK
Sbjct: 325 ---EDRIEDAIRAFGKV--------------------QDMGIRPNTVLYNAIILGLCKRR 361
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
E H +L ++ G P++ T+ +I+ L ++A D L E+
Sbjct: 362 ETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 408
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 113/239 (47%), Gaps = 3/239 (1%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+YN ++ +C +D A + EM + P+ T+NTLI G C +L +
Sbjct: 2 AYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
L PD T+ +++ C+ ++ A+ L EM + G P+ +TYN+++ +C G V
Sbjct: 59 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
++ + + + P+ ++N +++ C + E AE+ M G P+ +++ L
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
I L + G + A + + + GC P+S + N +L +Q + ++A + RG
Sbjct: 179 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN ++ AL +S +D+A Q+ C P +YN +I G+ + G EA
Sbjct: 237 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 296
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+ +M G P++ TY+ + G C R+ + R +++ + PN +++ G
Sbjct: 297 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 356
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + + H A +L + + + L+ L+ + EA +L ++ R
Sbjct: 357 LCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRA 412
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 129/528 (24%), Positives = 233/528 (44%), Gaps = 83/528 (15%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFT---------------- 47
LG S R N++++ L ++ + F+QM PD+FT
Sbjct: 202 LGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVH 261
Query: 48 -------------------YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILID 88
Y+ +++G C +G ++A R++ + G G++PN+ TYT+L+
Sbjct: 262 ALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVK 321
Query: 89 GFCNAKRVAEVFRVL-EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPL 147
G+CN K + E V+ EI K + + +EA ++++G + A LL E +
Sbjct: 322 GYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLL-----NEMV 376
Query: 148 TQKLVCNTLLYRLSNNSMAS-----EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
+L N +Y + N EA IL +M G P++ +++
Sbjct: 377 DSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYN------------- 423
Query: 203 ETCGILDTFIKRGVKPR-FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
++D + K+G+ + F TY N + ++ + +YN +
Sbjct: 424 ---SLVDGYCKKGLMNKAFETY--------------------NTMLRNGFAATTLTYNAL 460
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
+ FC + +D A + M + IAPN ++ +TL+ G K + K L L G
Sbjct: 461 LKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGL 520
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
+ TFN++I+ LC+ R +A + + +M +W PP+ ITY L C IGD+ R+ R
Sbjct: 521 AKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASR 580
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
+ +++ +P I FN+LI + K F M GL P+ +Y ALI
Sbjct: 581 ILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWC 640
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
K G A +L M + G P+ + + ++ ++G+F+EA+ +++
Sbjct: 641 KEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQ 688
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 224/502 (44%), Gaps = 30/502 (5%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P T YN+++D K ++ A+ + M + TYN L+ G C +G +D+
Sbjct: 413 VGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDD 472
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
ALRL M G APN + + L+DGF + + + + + R + N T ++++
Sbjct: 473 ALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVIN 532
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +A EL+ + + + TL A+ IL ++ + G+ P
Sbjct: 533 GLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAP 592
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-DVEGDRY 242
F+ +T + IL RG+ P Y L+ K G + Y
Sbjct: 593 TIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLY 652
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL------------ 290
L + K LV N+ + ++ CF + D A + + + D+ P++
Sbjct: 653 LEMIEKG-LVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVAN 711
Query: 291 --------------VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
+ +N +I G CK + + LL L + GF D FT++S+I C
Sbjct: 712 FIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHG-C 770
Query: 337 RAHRFED-ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
A F D A D M+ G+ PN +TYN LI LC G+++R++ LF+K+ ISP+
Sbjct: 771 SASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNA 830
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
T+N LI C+ I +A K M+ G+ P F+YS LI L G +EA +
Sbjct: 831 ITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQ 890
Query: 456 MEQNGCNPDSYTSNLILETLVQ 477
M +N +P+ T +++ V+
Sbjct: 891 MIENNVDPNYVTYWTLIQGYVR 912
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/511 (23%), Positives = 221/511 (43%), Gaps = 26/511 (5%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
++ AVI+ + ++ A +M + + + F YNI+I+G C++G + EA ++ +M
Sbjct: 351 VFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEM 410
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
G+G P+ Y+Y L+DG+C + + F M T +L+ G
Sbjct: 411 TGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSI 470
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
A L +++ ++ C+TLL + +A + ++ RG ++TF+
Sbjct: 471 DDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTV 530
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ L + E ++D + P TY L K G R LN +
Sbjct: 531 INGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGF 590
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+ +N +I + +I EM +R ++PN V + LI+G CK+ ++H
Sbjct: 591 APTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYN 650
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN------------ 359
L + ++E G P+ F +S++ C R +F++A L +V + P+
Sbjct: 651 LYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVA 710
Query: 360 --------------TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
I +NI+I LC +G + + L ++ D +T+++LI
Sbjct: 711 NFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGC 770
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
++ A +ML++GL P+ +Y++LI L KSG A F + G +P++
Sbjct: 771 SASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNA 830
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
T N +++ + G EA + + E GI
Sbjct: 831 ITYNTLIDKHCKDGYITEAFKLKQRMIEEGI 861
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/499 (24%), Positives = 218/499 (43%), Gaps = 26/499 (5%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
+YN +I+ K + A+ +M+ +PD ++YN L+ G C+ G++++A M
Sbjct: 386 VYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTM 445
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
G+A TY L+ GFC+ + + R+ +M ++ + PNE + +L+ G F+
Sbjct: 446 LRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKT 505
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
KA L + R NT++ L EA ++ KM P+ T+
Sbjct: 506 EKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTL 565
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ D++ IL+ G P + L+ + A + + + L + L
Sbjct: 566 FSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGL 625
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
N +Y +I +CK + A + EM ++ + PNL ++L+S + + +
Sbjct: 626 SPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANL 685
Query: 312 LLVMLLECGFKPD--------------------------KFTFNSMIDCLCRAHRFEDAL 345
+L L+ PD K +N +I LC+ R EDA
Sbjct: 686 VLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAK 745
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+ L+++ + G + TY+ LI A G V + L M + ++P+I T+N+LI
Sbjct: 746 NLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGL 805
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
C+ ++ +A F + T G+ P+ +Y+ LI K G EA + M + G +P
Sbjct: 806 CKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTV 865
Query: 466 YTSNLILETLVQQGRFEEA 484
+T ++++ L QG EEA
Sbjct: 866 FTYSILINGLCTQGYMEEA 884
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 191/452 (42%), Gaps = 36/452 (7%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
++++L+ + G +D AL++ +M LG ++ + +++ + V E M
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
+ P++ TV M + K V + L + M
Sbjct: 235 QRAGALPDKFTVA---------------------IMAKAYCKVKGVVHALEFVEEMTKMG 273
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
E + GY T N+ +LD+ RG P TY LL
Sbjct: 274 VEVNLVAYHAVMNGYCEVGQT--------------NDARRMLDSLPGRGFSPNIVTYTLL 319
Query: 227 MEALYKAGRDVEGDRYLNHVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
++ E + + + K++ LV + + VI+ +C++ M+ A + EM D
Sbjct: 320 VKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSR 379
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
+ NL +N +I+G+CK + + +L + G +PD +++NS++D C+ A
Sbjct: 380 LQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAF 439
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+ + M+ G T+TYN L++ C++G + +LRL+ M I+P+ + + L+ F
Sbjct: 440 ETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGF 499
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
+ K EKA + L GL + +++ +I L K R EA++ M+Q C PD
Sbjct: 500 FKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDI 559
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T + + G + A I+ + G +
Sbjct: 560 ITYRTLFSGYCKIGDMDRASRILNELENLGFA 591
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G++P+ YN++I L KS + A F+++ P+ TYN LI C+ G + E
Sbjct: 789 VGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITE 848
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +L ++M G P V+TY+ILI+G C + E ++L+ M E NV PN T +L+
Sbjct: 849 AFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQ 908
Query: 124 GVFRC 128
G RC
Sbjct: 909 GYVRC 913
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 119/292 (40%), Gaps = 37/292 (12%)
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+L V+K+ S S+++++ +D A ++ EMR ++ + N++++
Sbjct: 161 HLVEVYKEFSFSAA-SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLA 219
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ ++ T + + G PDKFT M C+ AL+ + EM + GV N +
Sbjct: 220 QTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLV 279
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT------------------------ 397
Y+ ++ C +G + R+ + SP+I T
Sbjct: 280 AYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEI 339
Query: 398 ------------FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
F A+I +C+M ++E A + M+ L+ + F Y+ +I K GR
Sbjct: 340 RKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGR 399
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
EA M G PD+Y+ N +++ ++G +A + T G +
Sbjct: 400 MVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFA 451
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 225/486 (46%), Gaps = 38/486 (7%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
T+L+N +I ++N ++ A + + +P +TY+ +I + G V L + K
Sbjct: 30 TQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLLMYK 89
Query: 70 QMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
QM + P+ T+ ILID A +V E V M + NV P+ T L+ R L
Sbjct: 90 QMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILI----RSL 145
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
+ +++ E M +G P T+
Sbjct: 146 GTIGRIDAVMKLFE-------------------------------SMTAQGCQPNLFTYH 174
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
+ + ++E C I +++G++P TY +L++A K G + +R + V K
Sbjct: 175 SVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTG---QLERAFDFVGKS 231
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
R +N +YN ++ + + E+ +M+ + + N +T+ LI V
Sbjct: 232 RSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDV 291
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+L + +++ K D T N+++DCL +A R E A + +M G+ +T+TYNILI
Sbjct: 292 WQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILING 351
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
L G + + L +M+ + +P+I T+N LI S+ + + + A + F M G+ P+
Sbjct: 352 LGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPN 411
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
SYS+LI+ K+GR D A F M+ GC P+ T NL+++ L++ GRF A + ++
Sbjct: 412 VVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLR 471
Query: 490 TSKERG 495
++ G
Sbjct: 472 EMRDAG 477
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 212/472 (44%), Gaps = 46/472 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y+++I +K + L ++QM + PD T+NILI + + V+EA
Sbjct: 60 GGRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEA 119
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M L +P+VYTYTILI R+ V ++ E M + PN T S++H
Sbjct: 120 CNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHA 179
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ EA I ++M +G P+
Sbjct: 180 -----------------------------------FGSAGRVDEACDIFQQMVQKGLQPD 204
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS---TYLLLMEALYKAGRDVEGDR 241
+ T++ + +T + F G F+ TY L+ +L + G D++G
Sbjct: 205 AVTYNILIDAF------GKTGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKG-DIQGLM 257
Query: 242 YLNHVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L K + LVSN +Y ++I+ ++ ++ EM D DI ++VT N ++
Sbjct: 258 ELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCL 317
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K V EL + G D T+N +I+ L RA + + A L EM E G PN
Sbjct: 318 SKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNI 377
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITYN LI S +++ + RLF +M+ ++P++ ++++LI+ F + + + A F
Sbjct: 378 ITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFRE 437
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
M G P++ +Y+ LI LI++GRF A + M GC T +L++
Sbjct: 438 MKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLV 489
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 168/365 (46%), Gaps = 3/365 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L +SP Y +I +L ID F+ M+ C+P+ FTY+ ++H G VDE
Sbjct: 129 LNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDE 188
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + +QM G P+ TY ILID F + ++ R + + + NE T SL+
Sbjct: 189 ACDIFQQMVQKGLQPDAVTYNILIDAF---GKTGQLERAFDFVGKSRSFTNEVTYNSLLS 245
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ R D EL + + ++ +L L+ RL + + +M D
Sbjct: 246 SLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKY 305
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T + + CL + + +G+ TY +L+ L +AG+ L
Sbjct: 306 DIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALL 365
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ ++ N+ +YN +I + K + + AT + EM++R +APN+V++++LI G K
Sbjct: 366 LEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKA 425
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
L + G P+ T+N +IDCL RA RF A++ L EM + G +T
Sbjct: 426 GRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTK 485
Query: 364 NILIR 368
++L+R
Sbjct: 486 SLLVR 490
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 178/405 (43%), Gaps = 3/405 (0%)
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
A+R +V R++E M++ + +L+H KA + L F +
Sbjct: 8 ARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYT 67
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
++++ + ++M ++P+ +TF+ + L + E C +
Sbjct: 68 YSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMF 127
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
K V P TY +L+ +L GR + + N+ +Y+ V+ F +D
Sbjct: 128 KLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVD 187
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A +I ++M + + P+ VT+N LI K ++ + + + + ++ T+NS++
Sbjct: 188 EACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVG---KSRSFTNEVTYNSLL 244
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
L R + ++ +M G+ N +TY ILI L G V +L+ +M + I
Sbjct: 245 SSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIK 304
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
DI T N ++ + ++E A + F M GL D +Y+ LI L ++G+ D A
Sbjct: 305 YDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGAL 364
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
L ME+NGC P+ T N ++ + + A + KERG++
Sbjct: 365 LLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVA 409
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F G++ T YN +I+ L ++ +D A +M + C P+ TYN LI +
Sbjct: 333 MKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSN 392
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A RL +M+ G APNV +Y+ LI+GF A R + MK PN T
Sbjct: 393 LSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNL 452
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSM 165
L+ + R A E L R M V +LL R+ M
Sbjct: 453 LIDCLIRAGRFGAAMEYL-REMRDAGCQMGKVTKSLLVRIPPQYM 496
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 129/554 (23%), Positives = 230/554 (41%), Gaps = 74/554 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV---- 60
GI+P+T +N +I + ++ D A F+ M +CKPD T+ IL+ +C+ G+
Sbjct: 149 GIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKA 208
Query: 61 --------------------------------VDEALRLVKQMEGLGYAPNVYTYTILID 88
V EA + QME G+ P+ Y +ID
Sbjct: 209 FEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMID 268
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
G A E +VL+ M + P E T LV+ + + +A EL
Sbjct: 269 GLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRP 328
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
++ +L++ + + EA ++ +M + GY P+ T + L + +
Sbjct: 329 NSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSF 388
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ ++ G KP TY +++ L K GR R + + + +Y ++D FCK+
Sbjct: 389 EEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKL 448
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE----------------- 311
+D A ++ E+ +PNL +++L+ G C V T +
Sbjct: 449 GRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGL 508
Query: 312 -------------------LLVMLLECGFKPDKFTFNSMIDCLCRA--HRFEDALDCLSE 350
+ ++ G KPD T+N +I+ LCR+ +R E A L +
Sbjct: 509 CCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHD 568
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
+ G P+ +TY L LC IG+V R++++ ++ + + D+ + AL C +
Sbjct: 569 LEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ 628
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+++A F M+ G PD +Y +I LIK + ++A + F M G P T
Sbjct: 629 VDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTA 688
Query: 471 ILETLVQQGRFEEA 484
+++ L G +EA
Sbjct: 689 LVQALCHAGNVDEA 702
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 221/498 (44%), Gaps = 52/498 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P + +ID L KS + + A F++M CKP+ TY +I G+ +IG V A
Sbjct: 360 GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANA 419
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++K M G P+ TY L+DGFC R+ E ++L+ + + + PN SLV G
Sbjct: 420 FRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKG 479
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ V NTL + A+E
Sbjct: 480 L---------------------CDGGSVENTLDDLFEQSKAAAE---------------- 502
Query: 185 SSTFDYTVTC-LVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
D + C ++ GL L+E C I + G KP +TY +L+ L ++ R+
Sbjct: 503 --NLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRS-RENRV 559
Query: 240 DRYLNHVFKDRLVS---NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
+R + +V + +Y + CK+ +DRA ++ E R ++V + L
Sbjct: 560 ERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTAL 619
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+G C +V + L ++ G PD + +I+ L + + EDA EM+ G
Sbjct: 620 CTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQ 679
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQA-DRISPDIYTFNALIQSFCRMNKIEKAE 415
P TY L+++LC G+V + F+ M A + + ++ALI FC+ K++ A
Sbjct: 680 KPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAAL 739
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
K F M++ G P + ++L L++SG+ ++A++ M G P + T IL+ L
Sbjct: 740 KLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799
Query: 476 VQQGRFEEAHDIVKTSKE 493
+ +E+ ++K +E
Sbjct: 800 RKS---DESGKLLKLVQE 814
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 202/469 (43%), Gaps = 23/469 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN +ID L K+ A M C P TY IL++ +C+ G ++ A
Sbjct: 255 GFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERA 314
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + M G+ PN YT LI GF + R+ E + + M E P+ T ++ G
Sbjct: 315 EELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDG 374
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + +A + M + T++ LS + A I++ M G P+
Sbjct: 375 LCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPD 434
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
S T+ CL+ G L+E +LD K P Y L++ L G VE
Sbjct: 435 SVTY----ICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGG-SVE-- 487
Query: 241 RYLNHVFKDRLVSNVNSYNM-------VIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
L+ +F+ S + N+ +I CK +D A I + M P+ T+
Sbjct: 488 NTLDDLFEQ---SKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTY 544
Query: 294 NTLISGHCKDAE--VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
N LI+G C+ E V + LL L G+ PD T+ + LC+ + A+ L E
Sbjct: 545 NILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEA 604
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
G + + Y L LC G V R++ LFQ+M +PD + +I + K+
Sbjct: 605 SSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKL 664
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
E A K F M+ G +P +Y+AL++AL +G DEA F M G
Sbjct: 665 EDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARG 713
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/516 (24%), Positives = 216/516 (41%), Gaps = 80/516 (15%)
Query: 17 IDALVKSNSIDLAYLKFQQMSVDQC--KPDRFTYNILIHGICRIGVVDEALRLVKQMEGL 74
+ A+++S + + F + + +Q + D FTYN L++ + + + ++M
Sbjct: 89 VAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKA 148
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
G APN +++ ILI F +R + EIMK + P+ T LV + + KA
Sbjct: 149 GIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKA 208
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP-ESSTFDYTVT 193
FE + +M G++P + + V
Sbjct: 209 FE-----------------------------------VFHEMMAMGFVPPDRALHTAMVR 233
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
L+ + E + K G P Y +++ L KAG E + L+++ V
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+Y ++++ CK ++RA E+ R M PN V + +LI G K + + L
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLF 353
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++E G++PD T MID LC++ FE A EM+ G PN +TY +I+ L I
Sbjct: 354 DEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKI 413
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G VA + R+ + M A PD T+ L+ FC++ ++++A + + P+ Y
Sbjct: 414 GRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLY 473
Query: 434 SALIK------------------------------------ALIKSGRFDEAKQTFLSME 457
S+L+K L K+GR DEA + F M
Sbjct: 474 SSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMV 533
Query: 458 QNGCNPDSYTSNLILETLV--QQGRFEEA----HDI 487
GC PD+ T N+++ L ++ R E A HD+
Sbjct: 534 SEGCKPDATTYNILINGLCRSRENRVERAFALLHDL 569
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 123/522 (23%), Positives = 213/522 (40%), Gaps = 39/522 (7%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN +++ LV + Y ++M P+ F++NILI R D+A+ + M+
Sbjct: 122 YNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMK 181
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVL-EIMKERNVCPNEATVRSLVHGVFRCLDP 131
P+++T+ IL+D C A + F V E+M V P+ A ++V + +
Sbjct: 182 RKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRV 241
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
+A E+ + + + NT++ L+ A EA +L M + +P T+
Sbjct: 242 KEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGIL 301
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
V L L + G +P Y L+ K+GR E + + +
Sbjct: 302 VNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGY 361
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+V ++ ++ID CK ++A + EM PN+VT+ T+I G K V
Sbjct: 362 RPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFR 421
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
++ ++ G PD T+ ++D C+ R ++A L E+ + PN Y+ L++ LC
Sbjct: 422 IMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLC 481
Query: 372 AIGDVARSL------------------------------------RLFQKMQADRISPDI 395
G V +L R+FQ+M ++ PD
Sbjct: 482 DGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDA 541
Query: 396 YTFNALIQSFCRM--NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
T+N LI CR N++E+A + +G PD +Y+ L L K G D A +
Sbjct: 542 TTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKML 601
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G N D + L QG+ + A + + +G
Sbjct: 602 EEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQG 643
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 91/234 (38%), Gaps = 1/234 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ +G P Y + L K +D A ++ S D Y L G+C G
Sbjct: 569 LEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ 628
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD A+ L ++M G AP+ Y +I+G K++ + + + M + P AT +
Sbjct: 629 VDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTA 688
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQK-LVCNTLLYRLSNNSMASEAAAILRKMGDR 179
LV + + +AF + R L ++ + L++ A + M R
Sbjct: 689 LVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISR 748
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
G +P + T LV + +L G P +T+ +++ L K+
Sbjct: 749 GNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKS 802
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 198/450 (44%), Gaps = 36/450 (8%)
Query: 35 QMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAK 94
+M C+PD TY ++++G+C+ G D A L+ +ME P V Y +IDG C K
Sbjct: 6 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 65
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCN 154
+ + + + M+ + + PN T SL+ CL CN
Sbjct: 66 HMDDALNLFKEMETKGIRPNVVTYSSLIS----CL-----------------------CN 98
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
+ S+A+ +L M +R P+ TF + V L E + D +KR
Sbjct: 99 YGRW--------SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 150
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
+ P TY L+ R E + + +V +YN +I FCK ++
Sbjct: 151 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 210
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
E+ REM R + N VT+N LI G + + +E+ ++ G P+ T+N+++D
Sbjct: 211 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 270
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LC+ + E A+ + + P TYNI+I +C G V LF + + PD
Sbjct: 271 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 330
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+ +N +I FCR E+A+ F M G P++ Y+ LI+A ++ G + + +
Sbjct: 331 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 390
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
M G D+ T L+ ++ GR +++
Sbjct: 391 EMRSCGFAGDASTIGLV-TNMLHDGRLDKS 419
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 204/396 (51%)
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
+++ M + P+ T +V+G+ + D AF LL + + + L+ NT++ L
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
+A + ++M +G P T+ ++CL ++ +L I+R + P
Sbjct: 63 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
T+ L++A K G+ VE ++ + + K + ++ +Y+ +I+ FC + +D A ++ M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+ P++VT+NTLI G CK V + E+ + + G + T+N +I L +A
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+ A + EMV GVPPN +TYN L+ LC G + +++ +F+ +Q ++ P IYT+N +
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I+ C+ K+E F ++ G++PD +Y+ +I + G +EA F M+++G
Sbjct: 303 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 362
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
P+S N ++ ++ G E + +++K + G +
Sbjct: 363 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 398
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 192/419 (45%), Gaps = 4/419 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y V++ L K DLA+ +M + +P YN +I G+C+ +D+A
Sbjct: 11 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 70
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L K+ME G PNV TY+ LI CN R ++ R+L M ER + P+ T +L+
Sbjct: 71 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 130
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +L ++R + ++L+ + EA + M + P+
Sbjct: 131 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 190
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + E + +RG+ TY +L++ L++AG
Sbjct: 191 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 250
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D + N+ +YN ++D CK +++A + ++ + P + T+N +I G CK
Sbjct: 251 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 310
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V +L L G KPD +N+MI CR E+A EM E G PN+ YN
Sbjct: 311 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 370
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LIR+ GD S L ++M++ + D T L+ + ++ +K+F ML+
Sbjct: 371 TLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRL---DKSFLDMLS 425
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 35/152 (23%)
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCR----------MNKIEKAE-------------- 415
+ L +M A PD+ T+ ++ C+ +NK+E+ +
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 416 -----------KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
F M T G+RP+ +YS+LI L GR+ +A + M + NPD
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+T + +++ V++G+ EA + +R I
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 152
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P YN +I + S + A F++M D P+ YN LI R G
Sbjct: 322 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 381
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID 88
+ + L+K+M G+A + T ++ +
Sbjct: 382 REASAELIKEMRSCGFAGDASTIGLVTN 409
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 199/404 (49%), Gaps = 6/404 (1%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP+ +N VI A+ K +D A F++M++ +C+PD FTY L+ G+C+ +DEA+
Sbjct: 168 ISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAV 227
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L+ +M+ G P+ T+ +LI+G C + V ++++ M + PNE T ++++G+
Sbjct: 228 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGL 287
Query: 126 FRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
CL KA LL R + + + + TL+ L + + +L + +RG+
Sbjct: 288 --CLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHA 345
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ L E G+ +++G +P Y L++ L + G+ E L
Sbjct: 346 NEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEIL 405
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ N +Y+ +I F K +A + +EM + PN + ++ LI G C+D
Sbjct: 406 CEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCED 465
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV--EWGVPPNTI 361
++ + + +L G +PD ++SMI LC A E L +EM+ E P+ +
Sbjct: 466 GKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVV 525
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
TYNIL+R+LC ++ ++ L M +PD+ T N + +
Sbjct: 526 TYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 569
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 222/475 (46%), Gaps = 41/475 (8%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVD---QCKPDRFTYNILIHGICRIGVVDEAL 65
+ R +N+V++ +++ A L+F + V P+ ++N++I +C++G+VD A+
Sbjct: 134 TVRSFNSVLNVIIQEGLFHRA-LEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAI 192
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ ++M P+V+TY L+DG C R+ E +L+ M+ P+ T L++G+
Sbjct: 193 EVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGL 252
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ D ++R KLV N L +G +P
Sbjct: 253 CKKGD-------MVR-------VTKLVDNMFL---------------------KGCVPNE 277
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + L L++ +LD + P TY L+ L K GR V+G L+
Sbjct: 278 VTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSS 337
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + +N +Y+ +I K + A + ++M ++ PN+V ++ LI G C++ +
Sbjct: 338 LEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGK 397
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + +E+L ++ G P+ FT++S+I + + A+ EM + PN I Y++
Sbjct: 398 LDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSV 457
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL- 424
LI LC G + ++ ++ M + PD+ ++++I C +E K F ML
Sbjct: 458 LIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQE 517
Query: 425 -GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+PD +Y+ L++AL K A SM GCNPD T N+ L L ++
Sbjct: 518 SDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREK 572
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 201/463 (43%), Gaps = 45/463 (9%)
Query: 40 QCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG--LGYAPNVYTYTILIDGFCN---AK 94
QC+ ++N +++ I + G+ AL + G +PNV ++ ++I C
Sbjct: 130 QCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVD 189
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCN 154
R EVFR + I K P+ T +L+ G
Sbjct: 190 RAIEVFREMAIQKCE---PDVFTYCTLMDG------------------------------ 216
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
L EA +L +M G P S TF+ + L D+ ++D +
Sbjct: 217 -----LCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLK 271
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G P TY ++ L G+ + L+ + + V N +Y +I+ K
Sbjct: 272 GCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDG 331
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ + +R N ++TLISG K+ + + L ++E G +P+ ++++ID
Sbjct: 332 VHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDG 391
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LCR + ++A + L EMV G PN TY+ LI+ G+ +++R++++M + P+
Sbjct: 392 LCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPN 451
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
++ LI C K+ +A + ML GLRPD +YS++I L +G + + F
Sbjct: 452 EICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFN 511
Query: 455 SM--EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
M +++ PD T N++L L +Q A D++ + +RG
Sbjct: 512 EMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRG 554
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 192/440 (43%), Gaps = 5/440 (1%)
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+ D+ + QM Y T+ LI+ + N+ +F+V + MK E
Sbjct: 46 IPDQIFKSASQMGS--YKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFI 103
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILR--KM 176
+ + P KA EL R ++ + + N++L + + A
Sbjct: 104 LVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVG 163
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
G P +F+ + + ++ + + +P TY LM+ L K R
Sbjct: 164 GKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRI 223
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
E L+ + + + ++N++I+ CK M R T++ M + PN VT+NT+
Sbjct: 224 DEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTI 283
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
I+G C ++ K LL ++ P+ T+ ++I+ L + R D + LS + E G
Sbjct: 284 INGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGH 343
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
N Y+ LI L ++ L++KM P+I ++ALI CR K+++A++
Sbjct: 344 HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKE 403
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
M+ G P+ F+YS+LIK K+G +A + + M +N C P+ ++++ L
Sbjct: 404 ILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC 463
Query: 477 QQGRFEEAHDIVKTSKERGI 496
+ G+ EA + RG+
Sbjct: 464 EDGKLREAMMMWTHMLGRGL 483
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 183/443 (41%), Gaps = 51/443 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS+ +N +I+ L K + M + C P+ TYN +I+G+C G +D+A
Sbjct: 237 GCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKA 296
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M PN TY LI+G R + +L ++ER NE +L+ G
Sbjct: 297 VSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISG 356
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F+ + EA + +KM ++G P
Sbjct: 357 LFK-----------------------------------EEKSEEAMGLWKKMVEKGCQPN 381
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + L L+E IL + +G P TY L++ +K G + R
Sbjct: 382 IVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWK 441
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K+ V N Y+++I C+ + A + M R + P++V ++++I G C
Sbjct: 442 EMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAG 501
Query: 305 EVHKTRELLVMLL--ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
V +L +L E +PD T+N ++ LC+ + A+D L+ M++ G P+ IT
Sbjct: 502 SVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLIT 561
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
NI + +L + + R F + L+ + +I A K ML
Sbjct: 562 CNIFLNALREKLNPPQDGREF--------------LDELVVRLHKRQRIVGAAKIIEVML 607
Query: 423 TLGLRPDNFSYSALIKALIKSGR 445
L P+ ++ +I L K +
Sbjct: 608 QKFLPPNASTWERIIPELCKPKK 630
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 126/254 (49%)
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K + NV S+N+VI CK+ ++DRA E+ REM + P++ T+ TL+ G CK+ +
Sbjct: 165 KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRID 224
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ LL + G P TFN +I+ LC+ + M G PN +TYN +I
Sbjct: 225 EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 284
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G + +++ L +M A + P+ T+ LI + + S+ G
Sbjct: 285 NGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHH 344
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+ ++YS LI L K + +EA + M + GC P+ + +++ L ++G+ +EA +I
Sbjct: 345 ANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEI 404
Query: 488 VKTSKERGISFKSF 501
+ +G + +F
Sbjct: 405 LCEMVNKGCTPNAF 418
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 125/297 (42%), Gaps = 16/297 (5%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y+ +I L K + A +++M C+P+ Y+ LI G+CR G +DEA ++ +M
Sbjct: 350 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 409
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G PN +TY+ LI GF + RV + M + N PNE L+HG+
Sbjct: 410 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLR 469
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM--GDRGYLPESSTFDY 190
+A + + R + +++++ L N + +M + P+ T++
Sbjct: 470 EAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNI 529
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L ++ +L++ + RG P T + + AL + + R F D
Sbjct: 530 LLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGRE----FLDE 585
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
LV ++ ++ A +I M + + PN T+ +I CK +V
Sbjct: 586 LVVRLHKRQRIVG----------AAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 632
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 216/456 (47%), Gaps = 5/456 (1%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN ++ AL + I A+ F +M+ PD TY I++HG C + ++ A++L+ +M
Sbjct: 256 YNILLKALCTAGRIKDAHQLFDEMA---SPPDVVTYGIMVHGYCTLSELETAIKLLSEMA 312
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G N YT +I C+ +V++ RV+E M V + A +++ G R D
Sbjct: 313 ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLA 372
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A +R + L+ L EA +L++M D+G ++ T+ +
Sbjct: 373 AARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+ E + + +++ V P TY L + L K G + L+ + L
Sbjct: 433 DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
N+ +YN +I+ CK +++A +M + + P++ T+ T+I C+ E+ + L
Sbjct: 493 LNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSL 552
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L +L+ G KP T+N +++ C + R E L M+E + PNT TYN L++ C
Sbjct: 553 LQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCI 612
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
++ + +++ M + + P+ T+N LI+ C+ +++A M+ G R S
Sbjct: 613 EKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASS 672
Query: 433 YSALIKALIKSGRFDEAKQTFLSM--EQNGCNPDSY 466
Y+ALI+ L K +F EA++ F M E+ PD Y
Sbjct: 673 YNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVY 708
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 214/482 (44%), Gaps = 50/482 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFT--YNILIHGICRIGVVD 62
GISPS NAV+ L ++ L FQ++ P++ T YNIL+ +C G +
Sbjct: 221 GISPSPESCNAVLCRLPLDEAVQL----FQEL------PEKNTCSYNILLKALCTAGRIK 270
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+A +L +M P+V TY I++ G+C + ++L M R + N S++
Sbjct: 271 DAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVI 327
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
L+C+ S+A ++ M G +
Sbjct: 328 ---------------------------ALLCD--------EGQVSDAVRVVEDMVMHGVV 352
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+++ F ++ DL D KRG+ TY L+ L +AG E +R
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERV 412
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + L + +Y ++ID +CKV M A + +M + + PN+VT+ L G CK
Sbjct: 413 LQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK 472
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+V ELL + G + + FT+NS+I+ LC+A E A+ + +M E G+ P+ T
Sbjct: 473 QGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYT 532
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y +I +LC ++ R+ L Q+M I P I T+N L+ FC ++E ++ ML
Sbjct: 533 YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML 592
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ P+ +Y++L+K + + M P+ T N++++ + +
Sbjct: 593 EKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652
Query: 483 EA 484
EA
Sbjct: 653 EA 654
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 174/396 (43%), Gaps = 37/396 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ ++ V+ + + A F +M D TY LI+G+CR G + EA
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++++ME G + TYT+LIDG+C ++ E F V M ++ V PN T +L G
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + D A ELL + N+L+ L +A + M + G P+
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L +L+ +L + +G+KP TY +LM +GR G R L
Sbjct: 530 VYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + N +YN ++ +C M TEI + M +++ PN T+N LI GHCK
Sbjct: 590 WMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + ++E GF+ ++N++I L + +F +A
Sbjct: 650 NMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEA-------------------- 689
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRIS--PDIYTF 398
RLF+KM+ +R++ PD+Y F
Sbjct: 690 ---------------RRLFEKMRKERLTAEPDVYNF 710
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 168/375 (44%), Gaps = 25/375 (6%)
Query: 134 AFELLIRFMEREPLTQKL----------VCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+F+LL+ + PL +L CN +L RL + EA + ++ LP
Sbjct: 200 SFDLLLLCLPSAPLLLRLRQYGISPSPESCNAVLCRLPLD----EAVQLFQE------LP 249
Query: 184 ESSTFDYTV--TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
E +T Y + L T + + + D P TY +++ +
Sbjct: 250 EKNTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIK 306
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L+ + L N +Y VI C + A + +M + + F T++SG C
Sbjct: 307 LLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFC 366
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ ++ R + + G D T+ ++I+ LCRA ++A L EM + G+ + +
Sbjct: 367 RKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAV 426
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY +LI C +G + + + KM R++P++ T+ AL C+ + A + M
Sbjct: 427 TYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEM 486
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ GL + F+Y++LI L K+G ++A +T + M++ G PD YT I+ L Q
Sbjct: 487 CSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKEL 546
Query: 482 EEAHDIVKTSKERGI 496
+ AH +++ ++GI
Sbjct: 547 DRAHSLLQEMLDKGI 561
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 158/354 (44%), Gaps = 5/354 (1%)
Query: 145 EPLTQKLVC--NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
+ L +K C N LL L +A + +M P+ T+ V T +L
Sbjct: 246 QELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELE 302
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
+L RG++ Y ++ L G+ + R + + +V + + V+
Sbjct: 303 TAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVM 362
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
FC+ + A EM+ R +A + VT+ LI+G C+ E+ + +L + + G
Sbjct: 363 SGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLD 422
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
D T+ +ID C+ + +A ++MV+ V PN +TY L LC GDV + L
Sbjct: 423 VDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANEL 482
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
+M + + +I+T+N+LI C+ +E+A + M GL+PD ++Y+ +I AL +
Sbjct: 483 LHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQ 542
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
S D A M G P T N+++ GR E +++ E+ I
Sbjct: 543 SKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNI 596
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 120/257 (46%), Gaps = 3/257 (1%)
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+F++ N SYN+++ C + A ++ EM P++VT+ ++ G+C +
Sbjct: 243 QLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLS 299
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E+ +LL + G + + + S+I LC + DA+ + +MV GV + +
Sbjct: 300 ELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFT 359
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++ C GD+A + F +MQ ++ D T+ ALI CR ++++AE+ M
Sbjct: 360 TVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDK 419
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL D +Y+ LI K G+ EA M Q P+ T + + L +QG A
Sbjct: 420 GLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAA 479
Query: 485 HDIVKTSKERGISFKSF 501
++++ +G+ F
Sbjct: 480 NELLHEMCSKGLELNIF 496
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 129/349 (36%), Gaps = 35/349 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ Y +ID K + A+L +M + P+ TY L G+C+ G V A
Sbjct: 420 GLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAA 479
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M G N++TY LI+G C A + + R + M E + P+ T
Sbjct: 480 NELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTY------ 533
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
T++ L + A ++L++M D+G P
Sbjct: 534 -----------------------------TTIIGALCQSKELDRAHSLLQEMLDKGIKPT 564
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + +L+ +++ + P +TY LM+
Sbjct: 565 IVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYK 624
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +V N N+YN++I CK M A EM ++ ++N LI K
Sbjct: 625 GMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKK 684
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
+ + R L + + + +N ID E L E+VE
Sbjct: 685 KFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 140/564 (24%), Positives = 237/564 (42%), Gaps = 71/564 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS + N ++ +LVKSN + ++ F M D +TY I+ C+ G +DEA
Sbjct: 201 GVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEA 260
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +M G PNV TY LIDG C + R+ E M E V P+ T LV+G
Sbjct: 261 VGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNG 320
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A +L+ + + V N L+ S +A + M +G P
Sbjct: 321 LVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPN 380
Query: 185 SSTFD-----------------------------------YTVTCLVTGLDLNETCGILD 209
+ T + Y + L + I+
Sbjct: 381 AVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVK 440
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ R +K S LL+ L K G+ +E D + K L +N + N ++ C+
Sbjct: 441 ALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCER 500
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
M+ +C+EM +R + + +++NTLI G CK ++ + +L +++ GFKPD +T+
Sbjct: 501 GNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTY 560
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY------------------------- 363
N ++ L + +D L E + GV PN TY
Sbjct: 561 NFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVY 620
Query: 364 ----------NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
NILI + G+ + +L M++ I P I+T++++I C + +E+
Sbjct: 621 NKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEE 680
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A+ F M GL P+ F Y+ALI K G+ D+ + M N P+ T ++++
Sbjct: 681 AKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMID 740
Query: 474 TLVQQGRFEEAHDIVKTSKERGIS 497
+ G +EA ++ GIS
Sbjct: 741 GYCKMGNTKEATKLLNEMIANGIS 764
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/482 (24%), Positives = 212/482 (43%), Gaps = 36/482 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++PS Y +++ LVK D A +M P+ F +N LI G R G +D+AL
Sbjct: 307 VNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDAL 366
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE--------------------- 104
R+ M G PN T+ L+ GFC ++ + +VLE
Sbjct: 367 RVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLL 426
Query: 105 -----------IMKE---RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT-Q 149
I+K RN+ N++ + LV G+ +C +A +L R +++ L
Sbjct: 427 CKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAAN 486
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
N LLY L E + ++M +RG + + +++ + + E + +
Sbjct: 487 TTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKE 546
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+K+G KP TY LM+ L G+ + R L+ +V N+ +Y ++++ +C +
Sbjct: 547 KMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNAD 606
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+D A + ++ + + V +N LI+ H K + +L + P FT++
Sbjct: 607 RIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYS 666
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
S+I +C E+A EM G+ PN Y LI C +G + + + Q+M ++
Sbjct: 667 SIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSN 726
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
I P+ T+ +I +C+M ++A K M+ G+ PD +Y+ L K K +E
Sbjct: 727 CIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEET 786
Query: 450 KQ 451
Q
Sbjct: 787 LQ 788
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/519 (21%), Positives = 223/519 (42%), Gaps = 42/519 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN +ID L KS ++ A + +M ++ P TY IL++G+ + DEA
Sbjct: 271 GVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEA 330
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +M G++PN + + LIDG+ + + RV + M + + PN T +L+ G
Sbjct: 331 NSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQG 390
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILR---------- 174
R +A ++L + + C+ +L+ L +S A I++
Sbjct: 391 FCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVN 450
Query: 175 -------------------------KMGDRGYLPESSTFDYTVTCLVTGL----DLNETC 205
++ D+ L ++T T L+ GL ++ E
Sbjct: 451 DSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTT---TSNALLYGLCERGNMEEVF 507
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
+ ++RG+ +Y L+ K+G+ E + + K + +YN ++
Sbjct: 508 PVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGL 567
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
MD + E +D + PN+ T+ ++ G+C + L L+ +
Sbjct: 568 ADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSY 627
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
+N +I +A F +A M + P TY+ +I +C V + +F++
Sbjct: 628 VVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEE 687
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M+ + + P+++ + ALI +C++ ++++ E M + ++P+ +Y+ +I K G
Sbjct: 688 MRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGN 747
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
EA + M NG +PD+ T ++ + ++ EE
Sbjct: 748 TKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEET 786
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 178/400 (44%), Gaps = 3/400 (0%)
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
F + + V P+ + L+ + + + HK+F + L T +
Sbjct: 190 AFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAIN 249
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
EA + KMG+ G LP T++ + L L E ++ V P
Sbjct: 250 AYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNP 309
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
TY +L+ L K + E + L ++ N +N +ID + + MD A +
Sbjct: 310 SLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVR 369
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
+M + + PN VT NTL+ G C+ ++ + ++L LL ++ + ++ LC++
Sbjct: 370 DDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKS 429
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR--ISPDIY 396
+F+ AL + ++ + N +L+ LC G ++ L+ ++ AD+ ++ +
Sbjct: 430 SKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRL-ADKKGLAANTT 488
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
T NAL+ C +E+ M+ GL D SY+ LI KSG+ +EA + M
Sbjct: 489 TSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKM 548
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ G PD+YT N +++ L +G+ ++ ++ +K+ G+
Sbjct: 549 MKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGV 588
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 158/366 (43%), Gaps = 37/366 (10%)
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
SE A+ ++G+R + E Y + L + F +GV P + L
Sbjct: 154 SEIASAFLELGERSH-GELDLLIYILCSQFQHLGFHWAFDTFMLFTSKGVFPSLKSCNFL 212
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
M +L K+ + R + + + ++ +V +Y I+ +CK +D A + +M + +
Sbjct: 213 MSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGV 272
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN+VT+N LI G CK + + ++E P T+ +++ L + +F++A
Sbjct: 273 LPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANS 332
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L EM G PN +N LI G++ +LR+ M + P+ T N L+Q FC
Sbjct: 333 VLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFC 392
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT-------------- 452
R N++E+AE+ +L+ L + + S ++ L KS +FD A +
Sbjct: 393 RTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDS 452
Query: 453 ----------------------FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
F ++ G ++ TSN +L L ++G EE + K
Sbjct: 453 LLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKE 512
Query: 491 SKERGI 496
ERG+
Sbjct: 513 MVERGL 518
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%)
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
F A D GV P+ + N L+ SL ++ +S R+F M + D+YT+
Sbjct: 187 FHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYAT 246
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
I ++C+ KI++A F M G+ P+ +Y+ LI L KSGR +EA M +N
Sbjct: 247 AINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENK 306
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
NP T +++ LV+ +F+EA+ ++ +G S F
Sbjct: 307 VNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEF 347
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 137/581 (23%), Positives = 245/581 (42%), Gaps = 89/581 (15%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G PS YNA++ L + +++ + ++MS DR T +C++G +
Sbjct: 198 FGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWAD 257
Query: 64 ALRLVKQ-------------MEGLGYA-------------------PNVYTYTILIDGFC 91
AL ++++ + GL A PNV TY L+ GF
Sbjct: 258 ALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFL 317
Query: 92 NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF---------- 141
K+ R++ +M PN + SLVHG D A++L R
Sbjct: 318 KKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYV 377
Query: 142 -----------MEREP------LTQK-----LVCNTLLYRLSNNSMA---------SEAA 170
E P L +K L + +L +++ + + +A
Sbjct: 378 AYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAF 437
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
IL++M +G++P++ST+ +T L + ++ + + GV P TY +L+++
Sbjct: 438 QILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSF 497
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
KAG + + + + NV +Y ++ + K + +A +I M D PN
Sbjct: 498 CKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNA 557
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLL----------------ECGFKPDKFTFNSMIDC 334
VT++ LI G CK E+ K E+ L+ C P+ T+ ++ID
Sbjct: 558 VTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDG 617
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LC+A + DA + L M+ G PN I Y+ LI C IG + + +F +M P
Sbjct: 618 LCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPS 677
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
++T+ +LI + +++ A K ML P+ +Y+A+I L K G ++A
Sbjct: 678 VHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLS 737
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
ME+ GC+P+ T +++ L + G+ + + + K +G
Sbjct: 738 LMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKG 778
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 126/538 (23%), Positives = 232/538 (43%), Gaps = 58/538 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T Y VI L ++ ++ ++L FQ+M PD +TY ILI C+ G++++A
Sbjct: 447 GFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQA 506
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+M +G +PNV TYT L+ + +K++ + + M + PN T +L+ G
Sbjct: 507 RSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDG 566
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + KA E+ + + + + N + A P
Sbjct: 567 LCKAGEIQKACEVYEKLIGTSGNVESD------FYFEGNDTCTIA-------------PN 607
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L +++ +LD + G +P Y L++ K G+
Sbjct: 608 VVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFL 667
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K + +V++Y +ID K +D A ++ EM + PN+VT+ +I G K
Sbjct: 668 RMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVG 727
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E+ K LL ++ E G P+ T+ ++ID L + + + +L +M G PN +TY
Sbjct: 728 EIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYR 787
Query: 365 ILIRSLCAIG--DVAR-------------------------------SLRLFQKMQADRI 391
+LI CA G D A SL L ++M++
Sbjct: 788 VLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHET 847
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS---YSALIKALIKSGRFDE 448
P + LI SF + ++E A + ++ + + S Y++LI+AL + + +E
Sbjct: 848 VPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEE 907
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF---KSFPG 503
A + M + G PD +++ L++ +++EA + G+++ KSF G
Sbjct: 908 AFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHEGVNWQDNKSFDG 965
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/579 (21%), Positives = 231/579 (39%), Gaps = 99/579 (17%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G S + Y+A+ + L + A +++ D + R N+L+ CR G+ DE
Sbjct: 128 VGYSHTGACYDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRCCRHGLWDE 187
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL + +++ GY P+ TY L+ +A +V FRV + M C + +T+
Sbjct: 188 ALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQ 247
Query: 124 GVFRCLDPHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ + A +L E+E ++C ++ L S+ +EA + L +M +
Sbjct: 248 ALCKVGRWADALNML----EKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCI 303
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T+ ++ + I++ + G P S + L+ AG +
Sbjct: 304 PNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKL 363
Query: 243 LNH-------------------------------------VFKDRLVSN-----VNSYNM 260
N V+++ L ++ VN+ N
Sbjct: 364 FNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANF 423
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
C C V ++A +I +EM + P+ T+ +I+ C+ +V K+ L + G
Sbjct: 424 S-RCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAG 482
Query: 321 FKPDKFTFNSMIDCLCRAHRFE-----------------------------------DAL 345
PD +T+ +ID C+A E A
Sbjct: 483 VNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAH 542
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM-------QAD--------- 389
D MV+ PN +TY+ LI LC G++ ++ +++K+ ++D
Sbjct: 543 DIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTC 602
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
I+P++ T+ ALI C+ K+ A + +ML G P+ Y ALI K G+ D A
Sbjct: 603 TIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNA 662
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
++ FL M + G P +T +++ + + GR + A ++
Sbjct: 663 QEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL 701
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 169/378 (44%), Gaps = 16/378 (4%)
Query: 130 DPHKAFELLIRFM---EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
DP + E L+R + +RE L + L N L+ R + + EA L ++ D GY P +
Sbjct: 148 DPARTAERLLREIGEDDREVLRRLL--NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAV 205
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ V L + + + G ST +AL K GR + LN +
Sbjct: 206 TYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADA---LNML 262
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K+ + +I + ++ + A MR PN+VT+ TL+SG K +
Sbjct: 263 EKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQF 322
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ ++ M++ G P+ FNS++ C A + A + M G PP + YNI
Sbjct: 323 GWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIF 382
Query: 367 IRSLCAIGDV--ARSLRLFQKMQADRISPD-----IYTFNALIQSFCRMNKIEKAEKAFF 419
I S+C ++ A L L +K+ + ++ + T N + C + K EKA +
Sbjct: 383 IGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTAN-FSRCLCGVGKFEKAFQILK 441
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M+ G PD +Y+ +I L ++ + +++ F M++ G NPD YT +++++ + G
Sbjct: 442 EMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAG 501
Query: 480 RFEEAHDIVKTSKERGIS 497
E+A + G S
Sbjct: 502 LIEQARSWFDEMRSVGCS 519
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 216/456 (47%), Gaps = 5/456 (1%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN ++ AL + I A+ F +M+ PD TY I++HG C + ++ A++L+ +M
Sbjct: 256 YNILLKALCTAGRIKDAHQLFDEMA---SPPDVVTYGIMVHGYCTLSELETAIKLLSEMA 312
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G N YT +I C+ +V++ RV+E M V + A +++ G R D
Sbjct: 313 ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLA 372
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A +R + L+ L EA +L++M D+G ++ T+ +
Sbjct: 373 AARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+ E + + +++ V P TY L + L K G + L+ + L
Sbjct: 433 DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
N+ +YN +I+ CK +++A +M + + P++ T+ T+I C+ E+ + L
Sbjct: 493 LNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSL 552
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L +L+ G KP T+N +++ C + R E L M+E + PNT TYN L++ C
Sbjct: 553 LQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCI 612
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
++ + +++ M + + P+ T+N LI+ C+ +++A M+ G R S
Sbjct: 613 EKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASS 672
Query: 433 YSALIKALIKSGRFDEAKQTFLSM--EQNGCNPDSY 466
Y+ALI+ L K +F EA++ F M E+ PD Y
Sbjct: 673 YNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVY 708
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 214/482 (44%), Gaps = 50/482 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFT--YNILIHGICRIGVVD 62
GISPS NAV+ L ++ L FQ++ P++ T YNIL+ +C G +
Sbjct: 221 GISPSPESCNAVLCRLPLDEAVQL----FQEL------PEKNTCSYNILLKALCTAGRIK 270
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+A +L +M P+V TY I++ G+C + ++L M R + N S++
Sbjct: 271 DAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVI 327
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
L+C+ S+A ++ M G +
Sbjct: 328 ---------------------------ALLCD--------EGQVSDAVRVVEDMVMHGVV 352
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+++ F ++ DL D KRG+ TY L+ L +AG E +R
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERV 412
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + L + +Y ++ID +CKV M A + +M + + PN+VT+ L G CK
Sbjct: 413 LQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK 472
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+V ELL + G + + FT+NS+I+ LC+A E A+ + +M E G+ P+ T
Sbjct: 473 QGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYT 532
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y +I +LC ++ R+ L Q+M I P I T+N L+ FC ++E ++ ML
Sbjct: 533 YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML 592
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ P+ +Y++L+K + + M P+ T N++++ + +
Sbjct: 593 EKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652
Query: 483 EA 484
EA
Sbjct: 653 EA 654
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 174/396 (43%), Gaps = 37/396 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ ++ V+ + + A F +M D TY LI+G+CR G + EA
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++++ME G + TYT+LIDG+C ++ E F V M ++ V PN T +L G
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + D A ELL + N+L+ L +A + M + G P+
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L +L+ +L + +G+KP TY +LM +GR G R L
Sbjct: 530 VYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + N +YN ++ +C M TEI + M +++ PN T+N LI GHCK
Sbjct: 590 WMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + ++E GF+ ++N++I L + +F +A
Sbjct: 650 NMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEA-------------------- 689
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRIS--PDIYTF 398
RLF+KM+ +R++ PD+Y F
Sbjct: 690 ---------------RRLFEKMRKERLTAEPDVYNF 710
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 168/375 (44%), Gaps = 25/375 (6%)
Query: 134 AFELLIRFMEREPLTQKL----------VCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+F+LL+ + PL +L CN +L RL + EA + ++ LP
Sbjct: 200 SFDLLLLCLPSAPLLLRLRQYGISPSPESCNAVLCRLPLD----EAVQLFQE------LP 249
Query: 184 ESSTFDYTV--TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
E +T Y + L T + + + D P TY +++ +
Sbjct: 250 EKNTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIK 306
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L+ + L N +Y VI C + A + +M + + F T++SG C
Sbjct: 307 LLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFC 366
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ ++ R + + G D T+ ++I+ LCRA ++A L EM + G+ + +
Sbjct: 367 RKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAV 426
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY +LI C +G + + + KM R++P++ T+ AL C+ + A + M
Sbjct: 427 TYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEM 486
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ GL + F+Y++LI L K+G ++A +T + M++ G PD YT I+ L Q
Sbjct: 487 CSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKEL 546
Query: 482 EEAHDIVKTSKERGI 496
+ AH +++ ++GI
Sbjct: 547 DRAHSLLQEMLDKGI 561
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 158/354 (44%), Gaps = 5/354 (1%)
Query: 145 EPLTQKLVC--NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
+ L +K C N LL L +A + +M P+ T+ V T +L
Sbjct: 246 QELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELE 302
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
+L RG++ Y ++ L G+ + R + + +V + + V+
Sbjct: 303 TAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVM 362
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
FC+ + A EM+ R +A + VT+ LI+G C+ E+ + +L + + G
Sbjct: 363 SGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLD 422
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
D T+ +ID C+ + +A ++MV+ V PN +TY L LC GDV + L
Sbjct: 423 VDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANEL 482
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
+M + + +I+T+N+LI C+ +E+A + M GL+PD ++Y+ +I AL +
Sbjct: 483 LHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQ 542
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
S D A M G P T N+++ GR E +++ E+ I
Sbjct: 543 SKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNI 596
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 120/257 (46%), Gaps = 3/257 (1%)
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+F++ N SYN+++ C + A ++ EM P++VT+ ++ G+C +
Sbjct: 243 QLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLS 299
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E+ +LL + G + + + S+I LC + DA+ + +MV GV + +
Sbjct: 300 ELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFT 359
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++ C GD+A + F +MQ ++ D T+ ALI CR ++++AE+ M
Sbjct: 360 TVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDK 419
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL D +Y+ LI K G+ EA M Q P+ T + + L +QG A
Sbjct: 420 GLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAA 479
Query: 485 HDIVKTSKERGISFKSF 501
++++ +G+ F
Sbjct: 480 NELLHEMCSKGLELNIF 496
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 129/349 (36%), Gaps = 35/349 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ Y +ID K + A+L +M + P+ TY L G+C+ G V A
Sbjct: 420 GLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAA 479
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M G N++TY LI+G C A + + R + M E + P+ T
Sbjct: 480 NELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTY------ 533
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
T++ L + A ++L++M D+G P
Sbjct: 534 -----------------------------TTIIGALCQSKELDRAHSLLQEMLDKGIKPT 564
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + +L+ +++ + P +TY LM+
Sbjct: 565 IVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYK 624
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +V N N+YN++I CK M A EM ++ ++N LI K
Sbjct: 625 GMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKK 684
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
+ + R L + + + +N ID E L E+VE
Sbjct: 685 KFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 129/500 (25%), Positives = 228/500 (45%), Gaps = 9/500 (1%)
Query: 2 SFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD----QCKPDRFTYNILIHGICR 57
S LG +P R +NA++DA V++ A F +S + P+ TYNI++ +C
Sbjct: 111 SILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCA 170
Query: 58 IGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
G +D A+ L + AP+ TY+ L+ G R+ +L+ M V P+
Sbjct: 171 RGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVC 230
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKM 176
+L+ G F+ + K + + ++ L N +L L E + +M
Sbjct: 231 YNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERM 290
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
P+ T+ + L D++ + IK G+ + Y L++ +AGR
Sbjct: 291 VANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRV 350
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA--PNLVTFN 294
E ++ + L N+ +YN++I M+D A E+ ++ ++D+A P+ VTF
Sbjct: 351 QEAWKFWDSAGFAGL-RNLRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFG 408
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
TLI G C++ +K + G + D F+++SMI+ LC R DA+ +M +
Sbjct: 409 TLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKD 468
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G PN+ YN LI C + + ++R++ KM + SP + T+N LI C+ K ++A
Sbjct: 469 GCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEA 528
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
M+ G PD +Y +LI+ L + D+A + + G D N+++
Sbjct: 529 SSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHG 588
Query: 475 LVQQGRFEEAHDIVKTSKER 494
L G+ +EA + KE+
Sbjct: 589 LCSAGKVDEALHVFSDMKEK 608
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 214/481 (44%), Gaps = 40/481 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN ++D L K +++M + +PD TY ILIHG+CR G VD A
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGA 318
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R+ ++ G + Y L+ GFC A RV E ++ + + N T ++ G
Sbjct: 319 ARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGL-RNLRTYNIMIKG 377
Query: 125 VFRCLDPHKAFELLIRFMEREP--LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+F +A EL +E++ + + TL++ L N A++A I +
Sbjct: 378 LFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEE------- 429
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
V+G L D F +Y ++ L GR V+ +
Sbjct: 430 -----------ARVSGKQL-------DVF----------SYSSMINGLCNVGRLVDAVKV 461
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ KD N + YN +I FC+V A I +M D +P ++T+NTLI G CK
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCK 521
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + ++E GF PD T+ S+I L + +DAL +++ G+ + +
Sbjct: 522 AEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMM 581
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADR-ISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
+NILI LC+ G V +L +F M+ + P++ T+N L+ I+KA + S+
Sbjct: 582 HNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSI 641
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
GL PD SY+ IK L R E Q + G P T N+++ +++ G
Sbjct: 642 TEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701
Query: 482 E 482
+
Sbjct: 702 Q 702
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 127/501 (25%), Positives = 223/501 (44%), Gaps = 18/501 (3%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P Y+ ++ L K + +D A +M + +PD YN L+ G + G ++ +
Sbjct: 189 VAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVM 248
Query: 66 RLV-KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R+ K ++ G PN+ TY +++DG C R EV V E M N+ P+ T L+HG
Sbjct: 249 RVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHG 308
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R D A + ++ + + N+L+ EA G G L
Sbjct: 309 LCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAG-LRN 367
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKR-GVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + L ++E + D K P T+ L+ L + G +
Sbjct: 368 LRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNG-------FA 420
Query: 244 NH---VFKDRLVS----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
N +F++ VS +V SY+ +I+ C V + A ++ +M PN +N L
Sbjct: 421 NKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNAL 480
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
ISG C+ + + + G P T+N++ID LC+A ++++A EMVE G
Sbjct: 481 ISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGF 540
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
P+ TY LIR L + + +L +++++ + D+ N LI C K+++A
Sbjct: 541 TPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALH 600
Query: 417 AFFSMLTLGLRPDNF-SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
F M P N +Y+ L+ L ++G D+A + S+ ++G PD + N ++ L
Sbjct: 601 VFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGL 660
Query: 476 VQQGRFEEAHDIVKTSKERGI 496
R E ++ RGI
Sbjct: 661 CSCDRIHEGIQLLDEVLSRGI 681
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/456 (21%), Positives = 205/456 (44%), Gaps = 10/456 (2%)
Query: 50 ILIHGICRIGVVDEALRLVKQMEG-LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
+++ R + D AL + + LG P + ++ L+D F A+R ++ +
Sbjct: 88 VVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSH 147
Query: 109 ----RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNS 164
R + PN T ++ + D +A L R+ ++ +TL+ L+
Sbjct: 148 GAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQD 207
Query: 165 MASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK-RGVKPRFSTY 223
A +L +M P+ ++ + + + + D +K G +P +TY
Sbjct: 208 RLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
++++ L K GR E + + L +V +Y ++I C+ +D A + E+
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
+ + +N+L+ G C+ V + + G + + T+N MI L + ++
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDE 386
Query: 344 ALDCLSEMVEWGVP--PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
A++ L +++E V P+T+T+ LI LC G ++ +F++ + D+++++++
Sbjct: 387 AIE-LWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSM 445
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I C + ++ A K + M G +P++ Y+ALI + R +A + + M NGC
Sbjct: 446 INGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGC 505
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+P T N +++ L + +++EA + + E G +
Sbjct: 506 SPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFT 541
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 222/493 (45%), Gaps = 34/493 (6%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y ++ AL A + M +PD TY LI G+C VD+A+ L
Sbjct: 111 PTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVEL 170
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+++M G PNV Y+ L+ G+C A R V +V E M R + P+ L+ + R
Sbjct: 171 LREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCR 230
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
KA +++ + MER + N L+ + EA ++ M ++G ++ T
Sbjct: 231 EGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVT 290
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ +T L L+++E G+L+ I G+ +
Sbjct: 291 YNTLITGLSGVLEMDEAMGLLEEMI-------------------------HGETMVE--- 322
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
NV ++N VI CK M +A ++ M + A NLVTFN LI G + +V
Sbjct: 323 -----PNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVK 377
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
K EL+ + G +PD FT++ +I+ C+ + + A LS+M G+ P + Y L+
Sbjct: 378 KAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLL 437
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+LC G + ++ F +M + D+ ++ +I CR+ + AE+ ML GL
Sbjct: 438 AALCEQGMMEQARNFFDEMHKN-CKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLI 496
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD+ +YS LI SG A++ M +G PD + +++ +G E+ ++
Sbjct: 497 PDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLEL 556
Query: 488 VKTSKERGISFKS 500
++ + I+ S
Sbjct: 557 IREMTAKDIALDS 569
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 192/412 (46%), Gaps = 5/412 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y +I L + +D A ++M +P+ Y+ L+ G C+ G +
Sbjct: 143 GVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECV 202
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ ++M G G P+V YT LID C +V + +V++ M ER + PN T L++
Sbjct: 203 SKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINS 262
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM--GDRGYL 182
+ + +A L +E+ + NTL+ LS EA +L +M G+
Sbjct: 263 MCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVE 322
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P TF+ + L + + + D + G T+ LL+ L + + +
Sbjct: 323 PNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMEL 382
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
++ + L + +Y+++I+ FCK+ +DRA + +MR I P LV + L++ C+
Sbjct: 383 MDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCE 442
Query: 303 DAEVHKTRELL-VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ + R M C K D +++MI CR + A + L M++ G+ P+++
Sbjct: 443 QGMMEQARNFFDEMHKNC--KLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSV 500
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
TY++LI GD+ + R+ ++M A PD+ F++LI+ + EK
Sbjct: 501 TYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEK 552
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 166/370 (44%), Gaps = 37/370 (10%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
NT+L L +AA L ++ P + ++ + L + G+L
Sbjct: 82 NTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQA 141
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
GV+P TY L+ L A + L + + + NV Y+ ++ +CK +
Sbjct: 142 SGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWEC 201
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
+++ EM R I P++V + LI C++ +V K +++ ++E G +P+ T+N +I+
Sbjct: 202 VSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLIN 261
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM--QADRI 391
+C+ ++A+ + M+E GV + +TYN LI L + ++ ++ L ++M +
Sbjct: 262 SMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMV 321
Query: 392 SPDIYTFNALIQSFC-----------------------------------RMNKIEKAEK 416
P++ TFN++I C R++K++KA +
Sbjct: 322 EPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAME 381
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
M + GL PD+F+YS LI K + D A+ M ++G P+ +L L
Sbjct: 382 LMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALC 441
Query: 477 QQGRFEEAHD 486
+QG E+A +
Sbjct: 442 EQGMMEQARN 451
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 143/287 (49%), Gaps = 2/287 (0%)
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
+P +Y LM AL R + L + + +V +Y +I C +D+A E
Sbjct: 110 RPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVE 169
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
+ REM + I PN+V ++ L+ G+CK ++ + G +PD + +ID LC
Sbjct: 170 LLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLC 229
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
R + + A + +M+E G+ PN +TYN+LI S+C G V ++ L M ++ D
Sbjct: 230 REGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAV 289
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSML--TLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
T+N LI + ++++A M+ + P+ +++++I L K+GR +A Q
Sbjct: 290 TYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRD 349
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
M +NGC + T NL++ L++ + ++A +++ G+ SF
Sbjct: 350 MMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSF 396
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 2/276 (0%)
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+Y ++ AL + G ++ +L V SY ++ C +A + R+M
Sbjct: 80 SYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDM 139
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+ + P++VT+ TLI G C A+V K ELL + E G +P+ ++ ++ C+A R+
Sbjct: 140 QASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRW 199
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
E EM G+ P+ + Y LI SLC G V ++ ++ KM + P++ T+N L
Sbjct: 200 ECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVL 259
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM--EQN 459
I S C+ +++A +ML G+ D +Y+ LI L DEA M +
Sbjct: 260 INSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGET 319
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
P+ T N ++ L + GR +A + E G
Sbjct: 320 MVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENG 355
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 108/210 (51%)
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
V++NT+++ C+ L+ ++ +P ++ +++ LC R A+ L +
Sbjct: 79 VSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRD 138
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M GV P+ +TY LIR LC DV +++ L ++M I P++ ++ L+Q +C+ +
Sbjct: 139 MQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGR 198
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
E K F M G+ PD Y+ LI +L + G+ +A Q M + G P+ T N+
Sbjct: 199 WECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNV 258
Query: 471 ILETLVQQGRFEEAHDIVKTSKERGISFKS 500
++ ++ ++G +EA + E+G++ +
Sbjct: 259 LINSMCKEGSVKEAMSLRNNMLEKGVALDA 288
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 89/173 (51%)
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D ++N+++ LCR DA L ++ P ++Y L+R+LCA +++ L
Sbjct: 77 DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+ MQA + PD+ T+ LI+ C ++KA + M G+ P+ YS L++ K+
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
GR++ + F M G PD ++++L ++G+ ++A ++ ERG+
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGL 249
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 6/173 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P Y ++ AL + ++ A F +M CK D Y+ +IHG CR+ A
Sbjct: 425 GIEPELVHYIPLLAALCEQGMMEQARNFFDEMH-KNCKLDVVAYSTMIHGACRLRDRKSA 483
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+K M G P+ TY++LI+ F N+ + RVL+ M P+ A SL+ G
Sbjct: 484 EEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKG 543
Query: 125 VFRCLDPHKAFELLIRFMERE-PLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
D K EL+ ++ L K++ ++NN E A+L+ +
Sbjct: 544 YGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLVANN----EGKALLQSV 592
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 119/456 (26%), Positives = 216/456 (47%), Gaps = 5/456 (1%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN ++ AL + I A+ F +M+ PD TY I++HG C + ++ A++L+ +M
Sbjct: 256 YNILLKALCTAGRIKDAHQLFDEMA---SPPDVVTYGIMVHGYCTLSELETAIKLLSEMA 312
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G N YT +I C+ +V++ RV+E M V + A +++ G R D
Sbjct: 313 ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLA 372
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A +R + L+ L EA +L++M D+G ++ T+ +
Sbjct: 373 AARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+ E + + +++ V P TY L + L K G + L+ + L
Sbjct: 433 DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
N+ +YN +I+ CK +++A +M + + P++ T+ T+I C+ E+ + L
Sbjct: 493 LNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSL 552
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L +L+ G KP T+N +++ C + R E L M+E + PNT TYN L++ C
Sbjct: 553 LQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCI 612
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
++ + +++ M + + P+ T+N LI+ C+ +++A M+ G R S
Sbjct: 613 EKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASS 672
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQN--GCNPDSY 466
Y+ALI+ L K +F EA++ F M ++ PD Y
Sbjct: 673 YNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVY 708
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 214/482 (44%), Gaps = 50/482 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFT--YNILIHGICRIGVVD 62
GISPS NAV+ L ++ L FQ++ P++ T YNIL+ +C G +
Sbjct: 221 GISPSPESCNAVLCRLPLDEAVQL----FQEL------PEKNTCSYNILLKALCTAGRIK 270
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+A +L +M P+V TY I++ G+C + ++L M R + N S++
Sbjct: 271 DAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVI 327
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
L+C+ S+A ++ M G +
Sbjct: 328 ---------------------------ALLCD--------EGQVSDAVRVVEDMVMHGVV 352
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+++ F ++ DL D KRG+ TY L+ L +AG E +R
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERV 412
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + L + +Y ++ID +CKV M A + +M + + PN+VT+ L G CK
Sbjct: 413 LQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK 472
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+V ELL + G + + FT+NS+I+ LC+A E A+ + +M E G+ P+ T
Sbjct: 473 QGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYT 532
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y +I +LC ++ R+ L Q+M I P I T+N L+ FC ++E ++ ML
Sbjct: 533 YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML 592
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ P+ +Y++L+K + + M P+ T N++++ + +
Sbjct: 593 EKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652
Query: 483 EA 484
EA
Sbjct: 653 EA 654
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 174/396 (43%), Gaps = 37/396 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ ++ V+ + + A F +M D TY LI+G+CR G + EA
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++++ME G + TYT+LIDG+C ++ E F V M ++ V PN T +L G
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + D A ELL + N+L+ L +A + M + G P+
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L +L+ +L + +G+KP TY +LM +GR G R L
Sbjct: 530 VYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + N +YN ++ +C M TEI + M +++ PN T+N LI GHCK
Sbjct: 590 WMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + ++E GF+ ++N++I L + +F +A
Sbjct: 650 NMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEA-------------------- 689
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRIS--PDIYTF 398
RLF+KM+ DR++ PD+Y F
Sbjct: 690 ---------------RRLFEKMRKDRLTAEPDVYNF 710
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 168/375 (44%), Gaps = 25/375 (6%)
Query: 134 AFELLIRFMEREPLTQKL----------VCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+F+LL+ + PL +L CN +L RL + EA + ++ LP
Sbjct: 200 SFDLLLLCLPSAPLLLRLRQYGISPSPESCNAVLCRLPLD----EAVQLFQE------LP 249
Query: 184 ESSTFDYTV--TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
E +T Y + L T + + + D P TY +++ +
Sbjct: 250 EKNTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIK 306
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L+ + L N +Y VI C + A + +M + + F T++SG C
Sbjct: 307 LLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFC 366
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ ++ R + + G D T+ ++I+ LCRA ++A L EM + G+ + +
Sbjct: 367 RKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAV 426
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY +LI C +G + + + KM R++P++ T+ AL C+ + A + M
Sbjct: 427 TYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEM 486
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ GL + F+Y++LI L K+G ++A +T + M++ G PD YT I+ L Q
Sbjct: 487 CSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKEL 546
Query: 482 EEAHDIVKTSKERGI 496
+ AH +++ ++GI
Sbjct: 547 DRAHSLLQEMLDKGI 561
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 158/354 (44%), Gaps = 5/354 (1%)
Query: 145 EPLTQKLVC--NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
+ L +K C N LL L +A + +M P+ T+ V T +L
Sbjct: 246 QELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELE 302
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
+L RG++ Y ++ L G+ + R + + +V + + V+
Sbjct: 303 TAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVM 362
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
FC+ + A EM+ R +A + VT+ LI+G C+ E+ + +L + + G
Sbjct: 363 SGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLD 422
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
D T+ +ID C+ + +A ++MV+ V PN +TY L LC GDV + L
Sbjct: 423 VDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANEL 482
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
+M + + +I+T+N+LI C+ +E+A + M GL+PD ++Y+ +I AL +
Sbjct: 483 LHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQ 542
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
S D A M G P T N+++ GR E +++ E+ I
Sbjct: 543 SKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNI 596
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 120/257 (46%), Gaps = 3/257 (1%)
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+F++ N SYN+++ C + A ++ EM P++VT+ ++ G+C +
Sbjct: 243 QLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLS 299
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E+ +LL + G + + + S+I LC + DA+ + +MV GV + +
Sbjct: 300 ELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFT 359
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++ C GD+A + F +MQ ++ D T+ ALI CR ++++AE+ M
Sbjct: 360 TVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDK 419
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL D +Y+ LI K G+ EA M Q P+ T + + L +QG A
Sbjct: 420 GLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAA 479
Query: 485 HDIVKTSKERGISFKSF 501
++++ +G+ F
Sbjct: 480 NELLHEMCSKGLELNIF 496
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 129/349 (36%), Gaps = 35/349 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ Y +ID K + A+L +M + P+ TY L G+C+ G V A
Sbjct: 420 GLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAA 479
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M G N++TY LI+G C A + + R + M E + P+ T
Sbjct: 480 NELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTY------ 533
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
T++ L + A ++L++M D+G P
Sbjct: 534 -----------------------------TTIIGALCQSKELDRAHSLLQEMLDKGIKPT 564
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + +L+ +++ + P +TY LM+
Sbjct: 565 IVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYK 624
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +V N N+YN++I CK M A EM ++ ++N LI K
Sbjct: 625 GMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKK 684
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
+ + R L + + + +N ID E L E+VE
Sbjct: 685 KFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 209/444 (47%), Gaps = 9/444 (2%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P T+N LI+G+C G V EA LV +M G G +V TY +++G C +
Sbjct: 8 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 67
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHK--AFELLIRFMEREPLTQKLVCNTLLYRL 160
L M+E ++ P+ +++ + C D H A L +E+ N ++
Sbjct: 68 LSKMEETHIKPDVVIYSAIIDRL--CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 125
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
+ S+A +LR M +R P+ TF+ ++ V L E + D + R + P
Sbjct: 126 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 185
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY ++ K R + H+F +V ++N +ID +C+ +D ++ RE
Sbjct: 186 VTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLRE 241
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
+ R + N T+NTLI G C+ ++ ++L ++ G PD T N ++ C +
Sbjct: 242 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 301
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
E+AL+ + + +T+ YNI+I +C V + LF + + PD+ T+N
Sbjct: 302 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 361
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
+I FC + I A F M G PDN +Y+ LI+ +K+G D++ + M NG
Sbjct: 362 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 421
Query: 461 CNPDSYTSNLILETLVQQGRFEEA 484
+ D++T ++ + L+ GR +++
Sbjct: 422 FSGDAFTIKMVAD-LITDGRLDKS 444
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 205/431 (47%), Gaps = 4/431 (0%)
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M +G P V T+ LI+G C RV E ++ M + + + T ++V+G+ + D
Sbjct: 1 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
A LL + E ++ + ++ RL + S+A + +M ++G P T++
Sbjct: 61 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ + ++ +L I+R + P T+ L+ A K G+ E ++ + +
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+ + +YN +I FCK N D A + M D +P++VTFNT+I +C+ V +
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGM 236
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+LL + G + T+N++I C A D EM+ GV P+TIT NIL+
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C + +L LF+ +Q +I D +N +I C+ +K+++A F S+ G+ PD
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+Y+ +I +A F M+ NG PD+ T N ++ ++ G +++ +++
Sbjct: 357 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 416
Query: 491 SKERGISFKSF 501
+ G S +F
Sbjct: 417 MRSNGFSGDAF 427
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 204/451 (45%), Gaps = 40/451 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ Y +++ + K A +M KPD Y+ +I +C+ G +A
Sbjct: 40 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 99
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +M G APNV+TY +IDGFC+ R ++ R+L M ER + P+ T +L+
Sbjct: 100 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 159
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ K FE +KL C+ +L+R P+
Sbjct: 160 SVK---EGKLFE-----------AEKL-CDEMLHRC--------------------IFPD 184
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + ++ + D P T+ +++ +A R EG + L
Sbjct: 185 TVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLR 240
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + LV+N +YN +I FC+V+ ++ A ++ +EM + P+ +T N L+ G C++
Sbjct: 241 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 300
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + EL ++ D +N +I +C+ + ++A D + GV P+ TYN
Sbjct: 301 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 360
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++I C ++ + LF KM+ + PD T+N LI+ + +I+K+ + M +
Sbjct: 361 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN 420
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
G D F+ ++ LI GR D++ LS
Sbjct: 421 GFSGDAFTIK-MVADLITDGRLDKSFSDMLS 450
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 35/173 (20%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNIL--------- 51
IS G+ +T YN +I + ++++ A FQ+M PD T NIL
Sbjct: 242 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 301
Query: 52 --------------------------IHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTI 85
IHG+C+ VDEA L + G P+V TY +
Sbjct: 302 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 361
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELL 138
+I GFC +++ + MK+ P+ +T +L+ G + + K+ EL+
Sbjct: 362 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 414
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 215/476 (45%), Gaps = 37/476 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++PS + +N V+ L KS + A F+ + + C D TY ++ + + + +A
Sbjct: 125 GVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDA 184
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L++++ G P + TY L++G C R+ E +L + + P+ T SL+ G
Sbjct: 185 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 244
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A++L +E + LV +T+ Y A++R + G +P+
Sbjct: 245 LGKEKRSFEAYKLF-----KEMALRGLVLDTVCY-----------TALIRGLLQAGKIPQ 288
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+S+ + T +G P T +++ L KAGR R
Sbjct: 289 ASS-------------------VYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFK 329
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L N Y+ +I CK MD A E+ +M+ P+ +T+N LI G CK
Sbjct: 330 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 389
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V R +LE G KPD +T+N ++ C+A + A +M PN +TY
Sbjct: 390 DVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYG 449
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI LC + ++ FQ M+ PD + +++L+ C+ K+E F M
Sbjct: 450 TLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERS 509
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
G+ ++ + + LI L K+ R DEA F ++ + G P Y N I+ TL++ +
Sbjct: 510 GV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISTLIKSAK 563
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 215/472 (45%), Gaps = 7/472 (1%)
Query: 18 DALVKS----NSIDLAYLKFQQMSVDQC--KPDRFTYNILIHGICRIGVVDEALRLVKQM 71
DA+VK DLA+ FQ +S + + T N L+ R EA L+K
Sbjct: 26 DAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNE 85
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER-NVCPNEATVRSLVHGVFRCLD 130
+ P+V T+ +LI G+C A+ E F V+ M+E V P+ T ++HG+ +
Sbjct: 86 LATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGK 145
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
A + ++ L+ N +A A++ K+ G P +T++
Sbjct: 146 VLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNA 205
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L L E +L + G P TY L++ L K R E + +
Sbjct: 206 LLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRG 265
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
LV + Y +I + + +A+ + + M + P++VT +T+I G CK +
Sbjct: 266 LVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAV 325
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+ + G P++ ++++I LC+A + + AL+ L++M + P+TITYNILI L
Sbjct: 326 RIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 385
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C GDV + F +M PD+YT+N L+ FC+ + A F M + P+
Sbjct: 386 CKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNV 445
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+Y LI L K + +A F M++ GC PDS+ + +++ L + G+ E
Sbjct: 446 VTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLE 497
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 120/487 (24%), Positives = 222/487 (45%), Gaps = 15/487 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSV--DQCKPDRFTYNILIHGICRIGVV 61
LGI PS YN ++D+ +K D + ++M C P+ T+N++I G+ R G +
Sbjct: 231 LGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDL 290
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
+EA +V+ M L + +TY LI G V + + M+ + P T ++
Sbjct: 291 EEAAEMVEGMR-LSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAM 349
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQK---LVCNTLLYRLSNNSMASEAAAILRKMGD 178
+HG+ + A ++F+E + + + N+LL EA + +
Sbjct: 350 IHGLLQSGQVEAA---QVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRH 406
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P T++ + DL E + + +++G P TY +LM+ + A
Sbjct: 407 AGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAM 466
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + L + +YN I + + +A + M I+ + VT+N LI
Sbjct: 467 AREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILID 526
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G CK ++ ++L + ++ G +PD T+ +I C +A +M+ G+ P
Sbjct: 527 GLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAP 586
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ +TY + I + C G++ + F+KM + + P+ T+N LI + CR + + A + F
Sbjct: 587 SAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHF 646
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
ML GL P+ ++Y+ LI K G +++A + + M QNG +PD T + +
Sbjct: 647 HEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKG---- 702
Query: 479 GRFEEAH 485
F+E H
Sbjct: 703 --FDEGH 707
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/501 (24%), Positives = 212/501 (42%), Gaps = 38/501 (7%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F +M+ PD N ++ + D+ + +M LG P++ TY L+D F
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249
Query: 93 AKRVAEVFRVLEIMKERN--VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQK 150
R +V +L+ M+ R PN+ T ++ G+ R D +A E+ + M
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEM-VEGMRLSKKASS 308
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
N L+ L +A + +M + G +P T++ + L+ +
Sbjct: 309 FTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVE 368
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
G++P TY L+ KAG E + L V +YN++ID +C++
Sbjct: 369 MRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGD 428
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF---- 326
++ A + EM ++ P++ T+ L+ G + RE +L G +PD F
Sbjct: 429 LEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNT 488
Query: 327 -------------------------------TFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
T+N +ID LC+ DA D +MV G
Sbjct: 489 RIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNG 548
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ P+ ITY LI + C G + + + F+ M +D ++P T+ I ++CR + A
Sbjct: 549 LQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAY 608
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
F ML G+ P+ +Y+ LI AL ++GR A + F M + G P+ YT L+++
Sbjct: 609 GWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGN 668
Query: 476 VQQGRFEEAHDIVKTSKERGI 496
++G +E+A + GI
Sbjct: 669 CKEGNWEDAMRFYFEMHQNGI 689
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 157/346 (45%), Gaps = 3/346 (0%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGY--LPESSTFDYTVTCLVTGLDLNETCGILDTF 211
NTLL + A +L++M RG LP T + +T L DL E +++
Sbjct: 241 NTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEG- 299
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
++ K TY L+ L G + D + + ++ V +YN +I + +
Sbjct: 300 MRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQV 359
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
+ A EMR + P+++T+N+L++G+CK + + L L G P T+N +
Sbjct: 360 EAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNIL 419
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
ID CR E+A EMVE G P+ TY IL++ +A + F +M + +
Sbjct: 420 IDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGL 479
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
PD + +N I++ + I KA + M+ G+ D +Y+ LI L K+G ++AK
Sbjct: 480 QPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKD 539
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ M NG PD T ++ ++G EA K G++
Sbjct: 540 LQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLA 585
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%)
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
AF M + G+ PD + +++ L + R+D+ M Q G P T N +L++ +
Sbjct: 189 AFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFL 248
Query: 477 QQGRFEEAHDIVKTSKERG 495
++GR ++ ++K + RG
Sbjct: 249 KEGRNDKVAMLLKEMETRG 267
>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 126/490 (25%), Positives = 222/490 (45%), Gaps = 13/490 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI YN +ID L K+N YL ++M P+ FTYN LI+G+ + + A
Sbjct: 40 GIEADVCTYNMLIDDLCKNNRSAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGA 99
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R+ +M L +PN TY ILIDG C+ + R+L++M+ + + P+E +L+ G
Sbjct: 100 TRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSG 159
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC----NTLLYRLSNNSMASEAAAILRKMGDRG 180
L F++ MER ++ +V ++ L + + E+ +L M G
Sbjct: 160 ----LSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDG 215
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ TF + + ++ K G+ P + Y L+ K G E
Sbjct: 216 ASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAF 275
Query: 241 RYLNHVFKDRLVSNVNSY--NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
R N+ R +V+ + N++I C+ + A + R M D+APN +TF+ +I+
Sbjct: 276 R--NYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIIN 333
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G+ + K + +++ G P FT+ S++ LC+ +A L ++
Sbjct: 334 GYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAV 393
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+T YN ++ C G ++ ++ LF +M + PD +T+ ++ R K+ A F
Sbjct: 394 DTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFF 453
Query: 419 FSMLTLG-LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
L G L P+ Y++L L K G+ + A + ME G NPD+ N +L+ +
Sbjct: 454 EKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSR 513
Query: 478 QGRFEEAHDI 487
G+ E+ +
Sbjct: 514 MGKMEKVEKL 523
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 213/457 (46%), Gaps = 8/457 (1%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P TYN +++ C+ G A L+ +ME G +V TY +LID C R A+ + +
Sbjct: 8 PTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLL 67
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
L+ M++R + PNE T +L++G+ + A + + ++ N L+ +
Sbjct: 68 LKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCD 127
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR----GVKP 218
+A +L M +G P+ + L++GL I + ++R G+
Sbjct: 128 CGNFEQALRLLDVMEAKGLRPDEVNYG----ALLSGLSKLAKFDIAKSLMERIRMSGMVV 183
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
+ Y +++ L K G E + L+ +FKD ++ +++++I+ FCK + A E+
Sbjct: 184 GYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVI 243
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
+M +APN V + TLI CK ++ + + G D F N +I LCRA
Sbjct: 244 CKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRA 303
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
R +A D + M + PN+IT++ +I +GD ++ +F +M P +T+
Sbjct: 304 GRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTY 363
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+L++ C+ + +A+K + + + D Y+ ++ K G+ +A F M Q
Sbjct: 364 GSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQ 423
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
PDS+T +IL L ++G+ A + + RG
Sbjct: 424 FNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARG 460
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 131/566 (23%), Positives = 225/566 (39%), Gaps = 79/566 (13%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P+ YN +I+ L+K I A F +M + P+R TYNILI G C G ++AL
Sbjct: 76 IAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQAL 135
Query: 66 RLVKQMEGLGYAPN-----------------------------------VYTYTILIDGF 90
RL+ ME G P+ YT +IDG
Sbjct: 136 RLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGL 195
Query: 91 CNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFM-------- 142
C + E ++L++M + P+ T L++G + A E++ +
Sbjct: 196 CKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNY 255
Query: 143 -----------EREPLTQK----------------LVCNTLLYRLSNNSMASEAAAILRK 175
++ +T+ +CN L+ L +EA +R
Sbjct: 256 VIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRH 315
Query: 176 MGDRGYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALY 231
M P S TFD C++ G D + + D IK G P TY L++ L
Sbjct: 316 MSTIDLAPNSITFD----CIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLC 371
Query: 232 KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
K G E + L + + N YN ++ CK + A + EM ++ P+
Sbjct: 372 KGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSH 431
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECG-FKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
T+ +++G + ++ L G P+K + S+ D L + + A E
Sbjct: 432 TYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEE 491
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M G+ P+TI N ++ +G + + +LF KMQ+ ++P + T+N L+ + +
Sbjct: 492 MEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKD 551
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+ K K + M +G+ PD + ++I L KSG D + M D T N+
Sbjct: 552 LLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNM 611
Query: 471 ILETLVQQGRFEEAHDIVKTSKERGI 496
++ + + +A D++ GI
Sbjct: 612 LITNSCETDKMGKAFDLLNIKNLLGI 637
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 150/314 (47%)
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
M GY+P T++ + ++D +G++ TY +L++ L K R
Sbjct: 1 MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
+G L + K + N +YN +I+ K + AT + EM +++PN VT+N
Sbjct: 61 SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
LI GHC + LL ++ G +PD+ + +++ L + +F+ A + + G
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ Y +I LC G + SL+L M D SPDI TF+ LI FC+ KI+ A+
Sbjct: 181 MVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAK 240
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ M GL P+ Y+ LI K G EA + + +M + G + D + N+++ +L
Sbjct: 241 EVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSL 300
Query: 476 VQQGRFEEAHDIVK 489
+ GR EA D ++
Sbjct: 301 CRAGRVAEAEDFMR 314
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/536 (21%), Positives = 211/536 (39%), Gaps = 42/536 (7%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I G+ R Y A+ID L K +D + M D PD T+++LI+G C+ G
Sbjct: 176 IRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGK 235
Query: 61 VDEALRLVKQMEGLGYAPNVYTYT-----------------------------------I 85
+ A ++ +M G APN Y +
Sbjct: 236 IKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNV 295
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
LI C A RVAE + M ++ PN T +++G D KAF + ++
Sbjct: 296 LISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLG 355
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
+LL L EA +L K+ +++ ++ ++ L++
Sbjct: 356 HCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAV 415
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF-KDRLVSNVNSYNMVIDC 264
+ ++ V P TY +++ L + G+ V + + L N Y + D
Sbjct: 416 ALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDG 475
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
KV + A+ I EM + I P+ + N ++ G+ + ++ K +L + + P
Sbjct: 476 LFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPS 535
Query: 325 KFTFNSMIDCLCRAHRFEDALDC---LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
T+N ++ + +D L C + M G+ P+ +T + +I LC G + +
Sbjct: 536 LATYNILLHGYSKK---KDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFK 592
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
+ +KM + D T N LI + C +K+ KA LG+ PD +Y+A+ L
Sbjct: 593 MLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLN 652
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
++ E+ M + G P S ++ + + G + A + + G+S
Sbjct: 653 RASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVS 708
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 112/502 (22%), Positives = 230/502 (45%), Gaps = 11/502 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKPDRFTYNILIHGICRIG 59
+S + ++P++ ++ +I+ A+ F +M + C P FTY L+ G+C+ G
Sbjct: 316 MSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHC-PSHFTYGSLLKGLCKGG 374
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+ EA +L+ ++ + A + Y ++ C ++++ + M + NV P+ T
Sbjct: 375 NLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYA 434
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
++ G+ R A + + R L+ K++ +L L ++ A+ I +M
Sbjct: 435 IILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEH 494
Query: 179 RGYLPESSTFDYTVTCLVTGLD-LNETCGILDTFIKR---GVKPRFSTYLLLMEALYKAG 234
+G P++ + ++ G + + + FIK + P +TY +L+ K
Sbjct: 495 KGINPDT----IAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKK 550
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
++ ++ N + + + + + + +I CK M+D ++ ++M D + +T N
Sbjct: 551 DLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLN 610
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
LI+ C+ ++ K +LL + G PD T+N++ L RA ++ L +M+E
Sbjct: 611 MLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLER 670
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G+ P + Y LI +C +GD+ + RL +M+A +S +A+++ + K+E+A
Sbjct: 671 GITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEA 730
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
ML L P +++ L+ L K + EA + M G D N+++
Sbjct: 731 MLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISG 790
Query: 475 LVQQGRFEEAHDIVKTSKERGI 496
L G A ++ + KERG+
Sbjct: 791 LCADGDALAAFNLYEEMKERGL 812
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 204/484 (42%), Gaps = 6/484 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG PS Y +++ L K ++ A ++ D YN ++ C+ G + +
Sbjct: 354 LGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSD 413
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN-VCPNEATVRSLV 122
A+ L +M P+ +TY I++ G ++ E R + PN+ SL
Sbjct: 414 AVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLF 473
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
G+F+ + A + ME + + + N +L S + + KM
Sbjct: 474 DGLFK-VGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSL 532
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-DVEGD 240
P +T++ + DL + + + G+ P T ++ L K+G DV
Sbjct: 533 TPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFK 592
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ +D LV + + NM+I C+ + M +A ++ I P++ T+N + +G
Sbjct: 593 MLKKMIMEDTLVDQL-TLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGL 651
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ + + ++ LL +LE G P + S+I+ +CR + A EM GV
Sbjct: 652 NRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWD 711
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ + ++R L G V ++ + M R+ P + TF L+ C+ K+ +A K
Sbjct: 712 VAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGK 771
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL-VQQG 479
M G++ D +Y+ LI L G A + M++ G P++ T +++ + +G
Sbjct: 772 MALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTTYCTLIDAISTNEG 831
Query: 480 RFEE 483
EE
Sbjct: 832 EVEE 835
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%)
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M P +VT+NT+++ CK +L+ + G + D T+N +ID LC+ +R
Sbjct: 1 MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
L +M + + PN TYN LI L + + R+F +M +SP+ T+N
Sbjct: 61 SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI C E+A + M GLRPD +Y AL+ L K +FD AK + +G
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+++ L + G +E+ ++ + G S
Sbjct: 181 MVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGAS 217
>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
Length = 1090
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 127/520 (24%), Positives = 233/520 (44%), Gaps = 36/520 (6%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN +ID L + A+L ++M D PD TYN LI+G G ++ A + M
Sbjct: 227 YNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHML 286
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
P+V TYT +IDG+C +R+ + VL M+ V P+E T +L++G +
Sbjct: 287 RQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLG 346
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A +L++ R K +C L+ S+A IL+ M + G P+ T+ +
Sbjct: 347 PALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALI 406
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPR---FSTYL------------------------- 224
+ ++ET IL K G+ P ++T +
Sbjct: 407 NGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLV 466
Query: 225 -------LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
L+ A Y+ G E + + ++ + + N S+N +ID +C + A +
Sbjct: 467 ANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSV 526
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
+M +PN+ T+ L+ G C+ + + ++ + LL+ D+ TFN+++ +C+
Sbjct: 527 YDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICK 586
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
++ALD +MV+ P+ TY IL+ C G + +L + Q M + PD
Sbjct: 587 YGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVA 646
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTL-GLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
+ L+ +++ A F ++ GL D +Y++L+ +K G + K+ M
Sbjct: 647 YTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDM 706
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
QN P+S + N+++ V++G+F ++ + K +GI
Sbjct: 707 YQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGI 746
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 219/469 (46%), Gaps = 13/469 (2%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D T+N L+ GIC+ G +DEAL + ++M P+++TYTIL+ GFC ++ +L
Sbjct: 573 DEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVML 632
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSN 162
++M E+ V P+ L++G+ A + + +E L + N+L+
Sbjct: 633 QMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLK 692
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+ ++ M P S++++ + V +++ + +++G++P T
Sbjct: 693 GGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVT 752
Query: 223 YLLLMEALYKAGRDVEGDRYLNH-----VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
Y LL+ L + G ++L +F D+LV ++++I F + + M A +
Sbjct: 753 YRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLV-----FDILITSFSEKSKMHNALRL 807
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
M+ ++P+ TF+ +I+G + + ++ E+L +L+ G +P+ + ++++ CR
Sbjct: 808 FNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCR 867
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
+ A EM G+ P + + +IR LC G + ++ +F M + P + T
Sbjct: 868 VGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVAT 927
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
F L+ S C+ +KI A M L+ D SY+ LI L K +A + M+
Sbjct: 928 FTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMK 987
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI--SFKSFPGL 504
G P+ T + + GR + ++++ +ERG+ +FK L
Sbjct: 988 SKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIPAFKQLENL 1036
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 220/484 (45%), Gaps = 7/484 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ LY +I K+ + +A F + + +N L+ R G++ EA
Sbjct: 429 GILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEA 488
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M + + N ++ +ID +C+ ++ E F V + M PN T ++L+ G
Sbjct: 489 EHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRG 548
Query: 125 VFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ C H +A + + ++ + N LL + EA I KM L
Sbjct: 549 L--CQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCL 606
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ T+ ++ + +L +++GV P Y L+ L G+ V+ Y
Sbjct: 607 PDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQ-VKAASY 665
Query: 243 LNH--VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + K+ L ++ +YN +++ + K ++ + +M ++ PN ++N L+ G+
Sbjct: 666 VFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGY 725
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K + K+ L ++ G +PD T+ +I L + A+ L +MV G+ P+
Sbjct: 726 VKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDK 785
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ ++ILI S + +LRLF M+ +SP TF+A+I R N ++++ +
Sbjct: 786 LVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHE 845
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
ML +GL+P++ Y AL+ A + G D A + M+ G P + I+ L + G+
Sbjct: 846 MLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGK 905
Query: 481 FEEA 484
EEA
Sbjct: 906 LEEA 909
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/492 (22%), Positives = 220/492 (44%), Gaps = 19/492 (3%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N ++++L + A Q+M C + TYN ++H + G AL +++ ME
Sbjct: 159 NILLNSLCTNGEFRKAEDMLQKMK-SCCLSNSATYNTILHWYVKKGRFKAALCVLEDMER 217
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF------- 126
++YTY I+ID C KR A F +L+ M++ ++ P+E T +L++G F
Sbjct: 218 DSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINH 277
Query: 127 -RCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
RC+ H M R+ L + T++ N +A ++L +M G +P
Sbjct: 278 ARCVFNH---------MLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPS 328
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L ++ RG+ + +L++ + G + + L
Sbjct: 329 ELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILK 388
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +D + +V +Y+ +I+ C++ M EI M+ I PN V + TLI +CK
Sbjct: 389 SMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAG 448
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V + V + G + N+++ R +A M + N++++N
Sbjct: 449 YVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFN 508
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I S C G + + ++ M SP++ T+ L++ C+ + +A++ F +L +
Sbjct: 509 CIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDI 568
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
D +++AL+ + K G DEA M +N C PD +T ++L ++G+ A
Sbjct: 569 PSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPA 628
Query: 485 HDIVKTSKERGI 496
+++ E+G+
Sbjct: 629 LVMLQMMLEKGV 640
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 168/362 (46%), Gaps = 6/362 (1%)
Query: 144 REPLTQKL-----VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTG 198
RE L +K CN LL L N +A +L+KM L S+T++ + V
Sbjct: 144 RESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKM-KSCCLSNSATYNTILHWYVKK 202
Query: 199 LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY 258
+L+ + ++ TY ++++ L + R L + KD L + +Y
Sbjct: 203 GRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTY 262
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
N +I+ F ++ A + M + + P++ T+ T+I G+C++ + K +L +
Sbjct: 263 NTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEI 322
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
G P + T++++++ C+ ALD + ++ G+ N ILI C +G++++
Sbjct: 323 TGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISK 382
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+ ++ + M D I PD+ T++ALI CRM K+ + ++ M G+ P++ Y+ LI
Sbjct: 383 AKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLIC 442
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
K+G A + F+ + + G + N +L ++G EA + ISF
Sbjct: 443 YYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISF 502
Query: 499 KS 500
S
Sbjct: 503 NS 504
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI P+ +++I L + ++ A + F M P T+ L+H +C+ + +
Sbjct: 884 IGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIAD 943
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L + ME +V +Y +LI G C K +++ + MK + + PN T +L
Sbjct: 944 ALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTG 1003
Query: 124 GVFRCLDPHKAFELLIRFMER 144
++ ELL ER
Sbjct: 1004 AMYSTGRMQNGEELLEDIEER 1024
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSI-DLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G+ P+ + ++ +L K + I D +LK + M + + K D +YN+LI G+C+ + +
Sbjct: 920 GMVPTVATFTTLMHSLCKESKIADALHLK-RLMELCRLKVDVVSYNVLITGLCKDKHISD 978
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCP 113
AL L +M+ G PNV TY L + R+ +LE ++ER + P
Sbjct: 979 ALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIP 1028
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 116/487 (23%), Positives = 220/487 (45%), Gaps = 2/487 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P T YNA++ K+ A ++M + C PD TYN L+ R G +E
Sbjct: 310 GYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEG 369
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G PN TYT +I+ + A +V + + + MKE PN T +++
Sbjct: 370 AALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGM 429
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + ++L ++ NT+L N M + ++M G+ P+
Sbjct: 430 LGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPD 489
Query: 185 SSTFDYTVTCLVT-GLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
TF+ +T G D++ I D ++ G P +TY L+ AL + G + +
Sbjct: 490 RDTFNTLITASGRCGSDIDAE-KIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVI 548
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + SY+++++ + K + I +++ D I P+ + TLI + K
Sbjct: 549 KDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKC 608
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ L + G+KPD FNSM+ R + + A + + + E G+ P+ +TY
Sbjct: 609 RALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTY 668
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L+ G+ ++ + +++Q D+ ++N +I+ FCR + +A + M++
Sbjct: 669 NSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMIS 728
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+RP +Y+ + G F E + M ++ C P+ T ++++ + +F+E
Sbjct: 729 RGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKE 788
Query: 484 AHDIVKT 490
A D V T
Sbjct: 789 AMDFVST 795
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/502 (22%), Positives = 226/502 (45%), Gaps = 42/502 (8%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F + +D D Y ++H R G + A+ + ++M G +P + TY +++D +
Sbjct: 197 FDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGK 256
Query: 93 AKRVA-EVFRVLEIMKERNVCPNEATVRSLVHGVFR--CLDPHKAFELLIRFMEREPLTQ 149
R ++ +L+ M+ + + +E T +++ R LD K F + ++ P T
Sbjct: 257 MGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGT- 315
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ N LL + SEA +I+++M D P++ T++ V V E ++D
Sbjct: 316 -VTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALID 374
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
T + G+KP TY ++ A +A + + + + + NV +YN ++ K +
Sbjct: 375 TMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKS 434
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK-TRELLVMLLECGFKPDKFTF 328
+ +I +M+ APN +T+NT++S C + +HK + + + CGF+PD+ TF
Sbjct: 435 QSEEMMKILCDMKVDGCAPNRITWNTMLS-MCGNKGMHKYVKRVFQEMKSCGFEPDRDTF 493
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N++I R DA EM+E G P+ TYN L+ +L GD + + + M+
Sbjct: 494 NTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKN 553
Query: 389 DRISPDIYTFNALIQSFCR------MNKIEK----------------------------- 413
P +++ ++ S+ + +N+IEK
Sbjct: 554 KGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAG 613
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
E+AF ++ G +PD +++++ + D A + +++ G PD T N +++
Sbjct: 614 MERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMD 673
Query: 474 TLVQQGRFEEAHDIVKTSKERG 495
+ G +A +I++ + G
Sbjct: 674 LYARGGECWKAEEILRELQNSG 695
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS---- 379
D + +++ R ++E A+ +M E G+ P +TYN++ L G + RS
Sbjct: 208 DVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVM---LDVYGKMGRSWNKI 264
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
L L +M++ + D +T + +I + R +++A++ F + + G P +Y+AL++
Sbjct: 265 LGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQV 324
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
K+G + EA ME N C PD+ T N ++ V+ G +EE ++ T E GI
Sbjct: 325 FGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGI 381
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 57/145 (39%), Gaps = 36/145 (24%)
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP------------ 428
+LF + D S D+ + ++ S+ R K E+A F M GL P
Sbjct: 195 KLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVY 254
Query: 429 ------------------------DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
D F+ S +I A + G DEAK+ F+ ++ G P
Sbjct: 255 GKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPG 314
Query: 465 SYTSNLILETLVQQGRFEEAHDIVK 489
+ T N +L+ + G + EA I+K
Sbjct: 315 TVTYNALLQVFGKAGIYSEALSIMK 339
>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Brachypodium distachyon]
Length = 726
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 120/468 (25%), Positives = 213/468 (45%), Gaps = 2/468 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKP-DRFTYNILIHGICRIGVVDE 63
G+ P+ Y + L ++ + A+ F QM + P + + +N +I G CR G V E
Sbjct: 241 GVKPNAATYGTYLYGLSRTRQVASAW-NFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQE 299
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ + M+ G P+ ++Y+IL+DG C V + +L M + P + SL+H
Sbjct: 300 AIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLH 359
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R AFEL R E+ +V + +L + + M ++P
Sbjct: 360 GLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVP 419
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ + + +L + G+ + + GV P T +L++ K E +L
Sbjct: 420 DAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFL 479
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ V + +V N+ Y ++I+ CKVN D I +M R P+ V ++ +I K
Sbjct: 480 HKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKA 539
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + L +L+ G KP+ FT+ S+I+ LC R + + M+ G+ P+ I Y
Sbjct: 540 LKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILY 599
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI C ++ +L +F+ M +S D + + LI F ++ ++ A+ M
Sbjct: 600 TSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTN 659
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
GL P +Y+ LI K G +A T+ SM Q G PD+ S ++
Sbjct: 660 KGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDAKLSCIL 707
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/496 (21%), Positives = 212/496 (42%), Gaps = 39/496 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLA--YLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
G SP+ Y+ ++ A + + LA + +M + KP+ TY ++G+ R V
Sbjct: 204 GPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVA 263
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A ++ + G N Y + +I GFC +V E V + MK+ + P+ + LV
Sbjct: 264 SAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILV 323
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
G+ + D ++LL+ M R + LV ++LL+ L A + R++ ++G+
Sbjct: 324 DGLCKQGDVLTGYDLLVE-MARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGF 382
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+ + + L++ C + + + P D
Sbjct: 383 KHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVP---------------------DA 421
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
Y +Y +I FC+ + A + M D ++PN+VT L+ G
Sbjct: 422 Y--------------NYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFG 467
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K+ + + L + + G P+ + +I+ LC+ ++ + ++M++ G P+T+
Sbjct: 468 KERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTV 527
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y+I+I S + + RLF KM + P+++T+ +LI C +++ + F M
Sbjct: 528 VYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHM 587
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ GL PD Y++LI K A + F M + G + D++ ++ +
Sbjct: 588 IWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAM 647
Query: 482 EEAHDIVKTSKERGIS 497
+ A +++ +G++
Sbjct: 648 DGAQCLMEEMTNKGLT 663
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/440 (21%), Positives = 190/440 (43%), Gaps = 2/440 (0%)
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRV--AEVFRVLEIMKERNVCPNEATVRSL 121
A L M+ G +PNVY+Y++L+ + + R+ AE F +L M+ + V PN AT +
Sbjct: 193 ARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTY 252
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++G+ R A+ L +R N ++ EA + M G
Sbjct: 253 LYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGL 312
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P++ ++ V L D+ +L + G+ P +Y L+ L +AG+
Sbjct: 313 VPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFE 372
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + + Y+++++ C+ ++ ++ +M + P+ + +LI C
Sbjct: 373 LFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFC 432
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ + + ++L+ G P+ T ++D + ++A L ++ ++G+ PN
Sbjct: 433 RHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLC 492
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y ++I LC + +F M PD ++ +I SF + K+ +A + F M
Sbjct: 493 MYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKM 552
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
L G +P+ F+Y++LI L R E F M G PD ++ ++
Sbjct: 553 LDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNM 612
Query: 482 EEAHDIVKTSKERGISFKSF 501
+ A +I + + G+S +F
Sbjct: 613 KAALEIFRGMGKLGLSADAF 632
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
L +A ++ ++ N L++ N+I A F M + G P+ +SYS L+ A
Sbjct: 161 LLTYTEAKKVGVELQLCNFLLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYT 220
Query: 442 KSGR--FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
R EA + ME G P++ T L L + + A + ++ +RG
Sbjct: 221 HGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRG 276
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 220/486 (45%), Gaps = 42/486 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I G PS ++YN V+D L+ N I + Y+ ++ M D +P+ FTYN+L+ +C+
Sbjct: 136 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 195
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD A +L+ +M G PN +YT +I C V E ++ E + P + +
Sbjct: 196 VDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFE-----PVVSVYNA 250
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L++G+ + D EL+ +E+ + +TL+ LSN+ A ++L +M
Sbjct: 251 LINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQM---- 306
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+KRG P T L++ + G +
Sbjct: 307 -------------------------------LKRGCHPNIHTLSSLVKGCFVRGTTFDAL 335
Query: 241 RYLNHVFKD-RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
N + + L NV +YN ++ FC +D+A + M + +PN+ T+ +LI+G
Sbjct: 336 DMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLING 395
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
K + + +L G P+ + SM++ LCR +F++A + M + P+
Sbjct: 396 FTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPS 455
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
T+N I+ LC G + + ++F++M Q R P+I T+N L+ + N+IE+A
Sbjct: 456 VPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLT 515
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+ G+ +Y+ L+ +G A Q M NG +PD T N+I+ +Q
Sbjct: 516 REIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQ 575
Query: 479 GRFEEA 484
G+ E A
Sbjct: 576 GKAERA 581
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 197/460 (42%), Gaps = 38/460 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN ++ AL K+N +D A +MS C P+ +Y +I +C +G+V E
Sbjct: 175 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEG 234
Query: 65 LRLVKQME-----------GL-------------------GYAPNVYTYTILIDGFCNAK 94
+L ++ E GL G +PNV +Y+ LI+ N+
Sbjct: 235 RQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSG 294
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVF---RCLDPHKAFELLIRFMEREPLTQKL 151
++ F +L M +R PN T+ SLV G F D + +IR +P +
Sbjct: 295 QIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQP--NVV 352
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
NTL+ ++ +A ++ M + G P T+ + L I +
Sbjct: 353 AYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKM 412
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+ G P Y ++EAL + + E + + + K+ +V ++N I C +
Sbjct: 413 LTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRL 472
Query: 272 DRATEICREMRDR-DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
D A ++ R+M + PN+VT+N L+ G K + + L + G + T+N+
Sbjct: 473 DWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNT 532
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
++ C A AL + +M+ G P+ IT N++I + C G R++++ + R
Sbjct: 533 LLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGR 592
Query: 391 --ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
PD+ ++ +I CR N E F M++ + P
Sbjct: 593 RKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP 632
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 196/416 (47%), Gaps = 10/416 (2%)
Query: 82 TYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD-PHKAFELLIR 140
T+ ++I +V V +L+ MK + +E S++ V+R + +A E+ R
Sbjct: 77 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI-SVYRQVGLAERAVEMFYR 135
Query: 141 FMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLD 200
E + N +L L + + R M G+ P T++ + L
Sbjct: 136 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 195
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
++ +L +G P +Y ++ ++ + G EG + +R V+ YN
Sbjct: 196 VDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQ-----LAERFEPVVSVYNA 250
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
+I+ CK E+ EM ++ I+PN+++++TLI+ ++ LL +L+ G
Sbjct: 251 LINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRG 310
Query: 321 FKPDKFTFNSMID-CLCRAHRFEDALDCLSEMVE-WGVPPNTITYNILIRSLCAIGDVAR 378
P+ T +S++ C R F DALD ++M+ +G+ PN + YN L++ C+ G++ +
Sbjct: 311 CHPNIHTLSSLVKGCFVRGTTF-DALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDK 369
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
++ +F M+ SP+I T+ +LI F + +E A + MLT G P+ Y+++++
Sbjct: 370 AVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVE 429
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
AL + +F EA+ M + C P T N ++ L GR + A + + +++
Sbjct: 430 ALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 485
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 97/207 (46%), Gaps = 5/207 (2%)
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
+TF +I D +V + LL + GF + F S+I + E A++
Sbjct: 76 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 135
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
+ E+G P+ YN ++ +L + +++ M+ D P+++T+N L+++ C+ NK
Sbjct: 136 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 195
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
++ A+K M G P+ SY+ +I ++ + G E +Q E P N
Sbjct: 196 VDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFE-----PVVSVYNA 250
Query: 471 ILETLVQQGRFEEAHDIVKTSKERGIS 497
++ L ++ ++ +++ E+GIS
Sbjct: 251 LINGLCKERDYKGGVELMSEMVEKGIS 277
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 219/467 (46%), Gaps = 11/467 (2%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
C + T+ L++G+CR G V +AL LV +M G+ P+ TY +++G C
Sbjct: 6 CPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSAL 65
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
+L M E + N ++V + + + KA + E+ L N ++
Sbjct: 66 NMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGY 125
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
+ S+A +LR M +R P+ TF + V ++ + ++R + P
Sbjct: 126 CSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTT 185
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC-----------FCKVN 269
TY +++ K R + + + ++ + N +ID FC+V
Sbjct: 186 ITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVG 245
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
++ A ++ +EM ++P++VT NTL++G C++ ++ K E+ + + D T N
Sbjct: 246 NVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCN 305
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+I+ +C+ ++ ++A D + + GV + +TYNILI G+ R+ ++ +M
Sbjct: 306 IIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCK 365
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
I P T+N+++ FC+ N++E+A + SM++ G PD ++S LIK K+GR D+
Sbjct: 366 GIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDG 425
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ F M Q G D+ T N ++ + G A DI + G+
Sbjct: 426 LELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGV 472
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 202/434 (46%), Gaps = 46/434 (10%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
G NV T+T L++G C RV + +++ M E P+ T ++V+G+ + D A
Sbjct: 5 GCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSA 64
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
+L + E + ++ + ++ RL + +A I +M ++G P T++ C
Sbjct: 65 LNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYN----C 120
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
++ G + +Y G+ + ++ L + + + +
Sbjct: 121 MIDG---------------------YCSY----------GKWSDAEQLLRDMIERNIDPD 149
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
V +++ +I+ F K + A E+ REM R+I P +T++++I G CK + + + +
Sbjct: 150 VVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFD 209
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHR-----------FEDALDCLSEMVEWGVPPNTITY 363
+++ G PD T N++ID CRA R A D EM+ GV P+ +T
Sbjct: 210 LMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTC 269
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L+ LC G + ++L +F+ Q ++ D T N +I C+ NK+++A F S+
Sbjct: 270 NTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPV 329
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ D +Y+ LI +K G F A+ +L M G P + T N +++ +Q R EE
Sbjct: 330 NGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEE 389
Query: 484 AHDIVKTSKERGIS 497
A +V + G S
Sbjct: 390 ARQMVDSMVSEGCS 403
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 209/448 (46%), Gaps = 13/448 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y +++ + K A ++M Q K + Y+ ++ +C+ G +A
Sbjct: 40 GHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKA 99
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G PNV TY +IDG+C+ + ++ ++L M ERN+ P+ T +L++
Sbjct: 100 QNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINA 159
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A EL + R + ++++ +S +A + M +G P+
Sbjct: 160 FVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPD 219
Query: 185 SSTFDYTV-TC------LVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
T + + C L+ G ++N + I GV P T L+ L +
Sbjct: 220 IITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCEN 279
Query: 234 GRDVEGDRYLNHVF-KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
G+ +E + VF K ++ + + N++I+ CK N +D A ++ + + ++VT
Sbjct: 280 GK-LEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVT 338
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+N LI K+ + ++ + +L G P T+NSM+D C+ +R E+A + MV
Sbjct: 339 YNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMV 398
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
G P+ +T++ LI+ C G V L LF +M + D T+NALI FC++ +
Sbjct: 399 SEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLN 458
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKAL 440
A+ F M++ G+ PD ++ +++ L
Sbjct: 459 GAQDIFEEMVSSGVCPDTITFRSMLAGL 486
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 200/420 (47%), Gaps = 11/420 (2%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I + +Y+A++D L K + A F +M P+ TYN +I G C G +A
Sbjct: 76 IKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAE 135
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+L++ M P+V T++ LI+ F +V+ + M RN+ P T S++ G
Sbjct: 136 QLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGF 195
Query: 126 ---FRCLDPHKAFELLI-RFMEREPLTQKLVCNT-------LLYRLSNNSMASEAAAILR 174
R D F+L++ + + +T + + L++ + A + +
Sbjct: 196 CKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQ 255
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
+M G P+ T + + L L + + F K + +T +++ + K
Sbjct: 256 EMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGN 315
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
+ E N + + + ++V +YN++I F K RA +I EM + I P+ VT+N
Sbjct: 316 KVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYN 375
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
+++ G CK + + R+++ ++ G PD TF+++I C+A R +D L+ SEM +
Sbjct: 376 SMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQR 435
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G+ +TITYN LI C +GD+ + +F++M + + PD TF +++ C +++K
Sbjct: 436 GLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKG 495
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 178/395 (45%), Gaps = 13/395 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ YN +ID A + M PD T++ LI+ + G V A
Sbjct: 110 GIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGA 169
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV------ 118
L ++M P TY+ +IDGFC R+ + + ++M + P+ T+
Sbjct: 170 EELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDG 229
Query: 119 -----RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAIL 173
R L+HG + + + A +L + + CNTLL L N +A +
Sbjct: 230 CCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMF 289
Query: 174 RKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
+ +++T + + + G ++E + ++ GV+ TY +L+ K
Sbjct: 290 KVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKE 349
Query: 234 GRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
G + D YL + K + S V +YN ++D FCK N ++ A ++ M +P++VT
Sbjct: 350 GNFLRAEDIYLEMLCKGIIPSTV-TYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVT 408
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
F+TLI G+CK V EL + + G D T+N++I C+ A D EMV
Sbjct: 409 FSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMV 468
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
GV P+TIT+ ++ LC ++ + L + + +Q
Sbjct: 469 SSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQ 503
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 142/290 (48%), Gaps = 11/290 (3%)
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
++ G T+ LM L + GR ++ ++ + ++ + +Y +++ CK+
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
A + R+M + I N+V ++ ++ CKD K + + + E G P+ T+N
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
MID C ++ DA L +M+E + P+ +T++ LI + G V+ + L+++M
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS------- 443
I P T++++I FC+ +++E A+ F M++ G PD + + LI ++
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240
Query: 444 ----GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
G + A+ F M NG +PD T N +L L + G+ E+A ++ K
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFK 290
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 94/187 (50%), Gaps = 4/187 (2%)
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
++E G + TF ++++ LCR R AL + MVE G P+ +TY ++ +C +GD
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+L + +KM +I ++ ++A++ C+ KA+ F M G+ P+ +Y+
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+I G++ +A+Q M + +PD T + ++ V++G+ A ++ + R
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 496 ISFKSFP 502
I FP
Sbjct: 181 I----FP 183
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
T N +I+ + K N +D A+ F + V+ + D TYNILI + G A +
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360
Query: 70 QMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
+M G P+ TY ++DGFC R+ E ++++ M P+ T +L+ G +
Sbjct: 361 EMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAG 420
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
EL +R + + N L++ + A I +M G P++ TF
Sbjct: 421 RVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFR 480
Query: 190 YTVTCLVTGLDLNETCGILDTFIK 213
+ L T +L + +L+ K
Sbjct: 481 SMLAGLCTKAELQKGLTMLEDLQK 504
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP ++ +I K+ +D F +M D TYN LIHG C++G ++ A
Sbjct: 401 GCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGA 460
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
+ ++M G P+ T+ ++ G C + + +LE +++
Sbjct: 461 QDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQK 504
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 229/479 (47%), Gaps = 2/479 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQC-KPDRFTYNILIHGICRIGVVDE 63
G+ P YN +ID K ++++ C P+ TYN++I+G+C++G DE
Sbjct: 214 GLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDE 273
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+L + ++M+ +++TY+ LI G C+ V V + M +R+V + T +L++
Sbjct: 274 SLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLN 333
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G R ++FEL + M +E + N + L N EA ++ + RG
Sbjct: 334 GFCRAGKIKESFELWV-MMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGA 392
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+S+T+ + L LN+ IL G K Y +++ L K GR E +
Sbjct: 393 DSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIV 452
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K + + N +I+ F + + ++ A REM + +P +V++NTLI+G CK
Sbjct: 453 HQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKA 512
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ +LE +KPD T++ ++D LC+ + + AL+ +++ G+ P+ +
Sbjct: 513 ERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMH 572
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NIL+ LC+ G + +L L+ M+ P++ T N L+ + + E A + M
Sbjct: 573 NILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFK 632
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G +PD SY+ +K L GR + F +NG P S T +++ +++ G +
Sbjct: 633 NGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLD 691
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/486 (24%), Positives = 213/486 (43%), Gaps = 10/486 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P R YNA+++A +++N ++ A P+ TYNILI + E
Sbjct: 108 FGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVE 167
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+ M P+VY+Y +I+G + + V + M ER + P+ ++
Sbjct: 168 AKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMID 227
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G F+ D + E+ R ++ + +V N ++ L E+ + +M
Sbjct: 228 GFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKN--- 284
Query: 183 PESSTFDYTVTCLVTGL-DLNETCGILDTF---IKRGVKPRFSTYLLLMEALYKAGRDVE 238
E +T + L+ GL D+ G ++ + +KR V TY L+ +AG+ E
Sbjct: 285 -ECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKE 343
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ K+ NV SYN+ I + ++ A + +R R + T+ LI
Sbjct: 344 SFELWVMMGKEN-CHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIH 402
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G CK+ ++K ++L + G K D F ++S++D L + R ++AL + +M ++G
Sbjct: 403 GLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCEL 462
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ N LI + ++ F++M+ SP + ++N LI C+ + A
Sbjct: 463 SPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFV 522
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
ML +PD +YS L+ L + + D A + + G PD N+++ L
Sbjct: 523 KEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSA 582
Query: 479 GRFEEA 484
G+ E+A
Sbjct: 583 GKIEDA 588
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 191/438 (43%), Gaps = 38/438 (8%)
Query: 62 DEALRLVKQMEGL-GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+EAL ++ME + G P + +Y L++ F A + + L + + PN T
Sbjct: 95 NEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQT--- 151
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ +LI+ ++ ++ V EA +L M +
Sbjct: 152 --------------YNILIKISVKK---RQFV---------------EAKGLLDWMWSKD 179
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ ++ + +V DL + D +RG+ P Y ++++ +K G V+G
Sbjct: 180 LKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGK 239
Query: 241 RYLNHVFKDRLV-SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ K V NV +YN++I+ CK+ D + E+ M+ + +L T+++LI G
Sbjct: 240 EIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICG 299
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
C V E+ +++ D T+N++++ CRA + +++ + M + N
Sbjct: 300 LCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-N 358
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
++YNI IR L V ++ +++ ++ D T+ LI C+ + KA K
Sbjct: 359 VVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILK 418
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
G + D F+YS+++ L K GR DEA M++ GC + N ++ V+
Sbjct: 419 EAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRAS 478
Query: 480 RFEEAHDIVKTSKERGIS 497
+ EEA + + +G S
Sbjct: 479 KLEEAICFFREMETKGCS 496
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 179/362 (49%), Gaps = 10/362 (2%)
Query: 148 TQKLVCN-----TLLYRLSNNSMASEAAAILRKMGDR-GYLPESSTFDYTVTCLVTGLDL 201
TQK C T+L + + M +EA +KM + G P +++ + + L
Sbjct: 71 TQKCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLL 130
Query: 202 NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
+ L F G+ P TY +L++ K + VE L+ ++ L +V SY V
Sbjct: 131 EKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTV 190
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE--C 319
I+ K + A E+ EM +R + P+++ +N +I G K + + +E+ L++ C
Sbjct: 191 INGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSC 250
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
+ P+ T+N MI+ LC+ RF+++L+ M + + TY+ LI LC +G+V +
Sbjct: 251 VY-PNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGA 309
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+ ++++M + D+ T+NAL+ FCR KI+++ + + M + SY+ I+
Sbjct: 310 VEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRG 368
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
L ++ + +EA + + + G DS T +++ L + G +A I+K +K+ G
Sbjct: 369 LFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLD 428
Query: 500 SF 501
+F
Sbjct: 429 AF 430
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 132/534 (24%), Positives = 236/534 (44%), Gaps = 37/534 (6%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ +G PS N ++ ++VK +L + F++MS P+ T+NILI+G+C G
Sbjct: 940 VGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGN 999
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ +A L+KQME G+ P + TY L++ +C R +++ M + + + T
Sbjct: 1000 LKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNV 1059
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+ + KA+ LL++ M +E ++ ++ NTL+ AA + +M
Sbjct: 1060 FIDNLCTNHRSAKAY-LLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKF 1118
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
P T++ + D E +LD G++ TY L+ L K +
Sbjct: 1119 DLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELA 1178
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
R L + + +V +Y ++ID CK M+D A ++ M + P+++T+++LI+G
Sbjct: 1179 KRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLING 1238
Query: 300 HCKDAEVHKTRELLVML----------------------------------LEC-GFKPD 324
C+ + +E++ + + C G D
Sbjct: 1239 FCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGAD 1298
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
FT N ++ LCR + +A L M G+ PN+ITY+ +I +IGD + F
Sbjct: 1299 HFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFD 1358
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
M P +T+ +L++ C+ + +A+K + + D+ Y+ L+ KSG
Sbjct: 1359 DMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSG 1418
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
EA F M QN PDSYT + +L L ++G+ A + T+ RG F
Sbjct: 1419 NLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLF 1472
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 138/566 (24%), Positives = 236/566 (41%), Gaps = 79/566 (13%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP+ YN +I+ VK I +A F +MS P+ TYN LI G C +G +EAL
Sbjct: 1085 ISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEAL 1144
Query: 66 RLVKQMEGLGYAPNVYTY-----------------------------------TILIDGF 90
RL+ ME G N TY T+LIDG
Sbjct: 1145 RLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGL 1204
Query: 91 CNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQK 150
C + E +++ M + V P+ T SL++G R + A E++ R + K
Sbjct: 1205 CKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNK 1264
Query: 151 LVCNTLLYRLSNNSMASEAAAILR-------------------------KMGDR------ 179
++ +TL+Y + +EA + K+G+
Sbjct: 1265 IIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCH 1324
Query: 180 ----GYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALY 231
G +P S T+D C++ G D D IK G P F TY L++ L
Sbjct: 1325 MSRIGLVPNSITYD----CIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLC 1380
Query: 232 KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
K G VE ++LN + + YN ++ CK + A + +M ++ P+
Sbjct: 1381 KGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSY 1440
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECG-FKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
T+++L++G C+ + L + G P+ + ++D L +A + A E
Sbjct: 1441 TYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEE 1500
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M++ G P+T+ +N +I S G + ++ F M+ + P++ T+N L+ F +
Sbjct: 1501 MMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQA 1560
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+ + + +M+ G+ PD ++ +LI L KSG D + M G D +T N+
Sbjct: 1561 LLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNI 1620
Query: 471 ILETLVQQGRFEEAHDIVKTSKERGI 496
++ + G+ +A D+V G+
Sbjct: 1621 LINKYSESGKMRKAFDLVNFMNTLGV 1646
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/504 (24%), Positives = 224/504 (44%), Gaps = 23/504 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI YN ID L ++ AYL ++M + P+ TYN LI+G + G + A
Sbjct: 1049 GIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVA 1108
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +M +PN TY LI G C+ E R+L+ M+ + NE T +L++G
Sbjct: 1109 AQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNG 1168
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCN----TLLYRLSNNSMASEAAAILRKMGDRG 180
+ + H+ FEL R +ER + +V + L+ L N M EA ++ M G
Sbjct: 1169 LCK----HEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDG 1224
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T+ + ++ I+ + G+ Y L+ + G E
Sbjct: 1225 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEA- 1283
Query: 241 RYLNHVFKDRLVSNVNSY-------NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
K V N N + N+++ C+ + A + M + PN +T+
Sbjct: 1284 ------MKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITY 1337
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
+ +I+G+ + +++CG P FT+ S++ LC+ +A L+ +
Sbjct: 1338 DCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHY 1397
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
+++ YN L+ C G++ ++ LF KM + + PD YT+++L+ CR K
Sbjct: 1398 IPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVT 1457
Query: 414 AEKAFFSMLTLG-LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
A F + + G L P++ Y+ L+ L K+G A F M + G PD+ N I+
Sbjct: 1458 AVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAII 1517
Query: 473 ETLVQQGRFEEAHDIVKTSKERGI 496
++ ++G+ +A+D T + G+
Sbjct: 1518 DSCSRRGQMMKANDFFSTMRWWGV 1541
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 205/444 (46%), Gaps = 35/444 (7%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
C +++LI + G++D A+ + + +G+ P+VYT +++ KR V+
Sbjct: 910 CNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVW 969
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
+ M ++ +CPN T L++G+ C++ +
Sbjct: 970 SLFREMSDKGICPNVGTFNILINGL--CVEGN---------------------------- 999
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
+A +L++M + G++P T++ + ++D I +G++
Sbjct: 1000 -----LKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADV 1054
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY + ++ L R + L + K+ + N +YN +I+ F K + A ++ E
Sbjct: 1055 CTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNE 1114
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M D++PN VT+N LI GHC + + LL + G + ++ T+ ++++ LC+ +
Sbjct: 1115 MSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEK 1174
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
FE A L M + I Y +LI LC G + +++L M D ++PD+ T+++
Sbjct: 1175 FELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSS 1234
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI FCR+ I+ A++ M GL + YS LI + G EA + + M NG
Sbjct: 1235 LINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNG 1294
Query: 461 CNPDSYTSNLILETLVQQGRFEEA 484
D +T N+++ +L + G+ EA
Sbjct: 1295 HGADHFTCNVLVSSLCRDGKLGEA 1318
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 205/493 (41%), Gaps = 1/493 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS Y +++ L K ++ A ++ D YN L+ C+ G + EA
Sbjct: 1364 GQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEA 1423
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFC-NAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ L +M P+ YTY+ L+ G C K V V M + PN LV
Sbjct: 1424 VALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVD 1483
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + P AF M++ + N ++ S +A M G P
Sbjct: 1484 GLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCP 1543
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+T++ + L + T ++ G+ P T+ L+ L K+G G + L
Sbjct: 1544 NLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLL 1603
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +++ ++N++I+ + + M +A ++ M + P+ T+N + +G K
Sbjct: 1604 GKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKK 1663
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ ++ +L +LE G P + ++I+ +CR + A EM G + +
Sbjct: 1664 SAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAE 1723
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+ ++R L G ++ + M R+ P I TF L+ FCR KI +A K M
Sbjct: 1724 SAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMEL 1783
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL+ D +Y+ LI + +G A + + M P+ T ++++ + +
Sbjct: 1784 CGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQ 1843
Query: 484 AHDIVKTSKERGI 496
++ +ERG+
Sbjct: 1844 GEKLLTDLQERGL 1856
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 154/350 (44%), Gaps = 2/350 (0%)
Query: 141 FMEREPLTQKL--VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTG 198
M+ PL + V + L+ M A +G G+ P T + + +V
Sbjct: 903 LMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKD 962
Query: 199 LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY 258
+ +G+ P T+ +L+ L G + L + ++ V + +Y
Sbjct: 963 KRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTY 1022
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
N +++ +CK A E+ M + I ++ T+N I C + K LL + +
Sbjct: 1023 NTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRK 1082
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
P++ T+N++I+ + + A +EM ++ + PN +TYN LI C +GD
Sbjct: 1083 EMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEE 1142
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+LRL M+A + + T+ L+ C+ K E A++ M + + +Y+ LI
Sbjct: 1143 ALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLID 1202
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
L K+G DEA Q +M ++G NPD T + ++ + G + A +I+
Sbjct: 1203 GLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEII 1252
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 4/215 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P YN + + L K ++ + + +M + P Y LI+G+CR+G +
Sbjct: 1644 LGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQG 1703
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +L +ME LG+ + + ++ G + + + VL+ M + P AT +L+H
Sbjct: 1704 AFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMH 1763
Query: 124 GVFRCLDPHKAFELLIR-FMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
C D A L ++ ME L +V N L+ + N ++ A + +M R
Sbjct: 1764 RF--CRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDL 1821
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
P +T+ V + +L + +L +RG+
Sbjct: 1822 CPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 1856
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 114/284 (40%), Gaps = 35/284 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P ++++I L KS DL +M ++ D+FT+NILI+ G + +A
Sbjct: 1575 GIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKA 1634
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LV M LG P+ TY + +G E VL M E V P A +L++G
Sbjct: 1635 FDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLING 1694
Query: 125 VFRCLDPHKAFEL-----LIRFMEREPLTQKLV-----CN-------------------- 154
+ R D AF+L + F E +V C
Sbjct: 1695 MCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPT 1754
Query: 155 -----TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
TL++R ++ +EA + M G + ++ + + D + +
Sbjct: 1755 IATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYE 1814
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
R + P +TY +L++A+ A ++G++ L + + L+S
Sbjct: 1815 EMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLIS 1858
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 16/178 (8%)
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTI----------------TYNILIRSLCAIGDVAR 378
L +A ++ A L + + G+ +I +++LIR G +
Sbjct: 873 LVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDY 932
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
++ F+ + P +YT N ++ S + + E F M G+ P+ +++ LI
Sbjct: 933 AVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILIN 992
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
L G +A ME+NG P T N +L ++GR++ A +++ +GI
Sbjct: 993 GLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGI 1050
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 132/534 (24%), Positives = 236/534 (44%), Gaps = 37/534 (6%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ +G PS N ++ ++VK +L + F++MS P+ T+NILI+G+C G
Sbjct: 189 VGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGN 248
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ +A L+KQME G+ P + TY L++ +C R +++ M + + + T
Sbjct: 249 LKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNV 308
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+ + KA+ LL++ M +E ++ ++ NTL+ AA + +M
Sbjct: 309 FIDNLCTNHRSAKAY-LLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKF 367
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
P T++ + D E +LD G++ TY L+ L K +
Sbjct: 368 DLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELA 427
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
R L + + +V +Y ++ID CK M+D A ++ M + P+++T+++LI+G
Sbjct: 428 KRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLING 487
Query: 300 HCKDAEVHKTRELLVML----------------------------------LEC-GFKPD 324
C+ + +E++ + + C G D
Sbjct: 488 FCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGAD 547
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
FT N ++ LCR + +A L M G+ PN+ITY+ +I +IGD + F
Sbjct: 548 HFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFD 607
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
M P +T+ +L++ C+ + +A+K + + D+ Y+ L+ KSG
Sbjct: 608 DMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSG 667
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
EA F M QN PDSYT + +L L ++G+ A + T+ RG F
Sbjct: 668 NLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLF 721
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 138/566 (24%), Positives = 236/566 (41%), Gaps = 79/566 (13%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP+ YN +I+ VK I +A F +MS P+ TYN LI G C +G +EAL
Sbjct: 334 ISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEAL 393
Query: 66 RLVKQMEGLGYAPNVYTY-----------------------------------TILIDGF 90
RL+ ME G N TY T+LIDG
Sbjct: 394 RLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGL 453
Query: 91 CNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQK 150
C + E +++ M + V P+ T SL++G R + A E++ R + K
Sbjct: 454 CKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNK 513
Query: 151 LVCNTLLYRLSNNSMASEAAAILR-------------------------KMGDR------ 179
++ +TL+Y + +EA + K+G+
Sbjct: 514 IIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCH 573
Query: 180 ----GYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALY 231
G +P S T+D C++ G D D IK G P F TY L++ L
Sbjct: 574 MSRIGLVPNSITYD----CIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLC 629
Query: 232 KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
K G VE ++LN + + YN ++ CK + A + +M ++ P+
Sbjct: 630 KGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSY 689
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECG-FKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
T+++L++G C+ + L + G P+ + ++D L +A + A E
Sbjct: 690 TYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEE 749
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M++ G P+T+ +N +I S G + ++ F M+ + P++ T+N L+ F +
Sbjct: 750 MMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQA 809
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+ + + +M+ G+ PD ++ +LI L KSG D + M G D +T N+
Sbjct: 810 LLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNI 869
Query: 471 ILETLVQQGRFEEAHDIVKTSKERGI 496
++ + G+ +A D+V G+
Sbjct: 870 LINKYSESGKMRKAFDLVNFMNTLGV 895
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/504 (24%), Positives = 224/504 (44%), Gaps = 23/504 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI YN ID L ++ AYL ++M + P+ TYN LI+G + G + A
Sbjct: 298 GIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVA 357
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +M +PN TY LI G C+ E R+L+ M+ + NE T +L++G
Sbjct: 358 AQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNG 417
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCN----TLLYRLSNNSMASEAAAILRKMGDRG 180
+ + H+ FEL R +ER + +V + L+ L N M EA ++ M G
Sbjct: 418 LCK----HEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDG 473
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T+ + ++ I+ + G+ Y L+ + G E
Sbjct: 474 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTE-- 531
Query: 241 RYLNHVFKDRLVSNVNSY-------NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
K V N N + N+++ C+ + A + M + PN +T+
Sbjct: 532 -----AMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITY 586
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
+ +I+G+ + +++CG P FT+ S++ LC+ +A L+ +
Sbjct: 587 DCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHY 646
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
+++ YN L+ C G++ ++ LF KM + + PD YT+++L+ CR K
Sbjct: 647 IPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVT 706
Query: 414 AEKAFFSMLTLG-LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
A F + + G L P++ Y+ L+ L K+G A F M + G PD+ N I+
Sbjct: 707 AVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAII 766
Query: 473 ETLVQQGRFEEAHDIVKTSKERGI 496
++ ++G+ +A+D T + G+
Sbjct: 767 DSCSRRGQMMKANDFFSTMRWWGV 790
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 205/444 (46%), Gaps = 35/444 (7%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
C +++LI + G++D A+ + + +G+ P+VYT +++ KR V+
Sbjct: 159 CNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVW 218
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
+ M ++ +CPN T L++G+ C++ +
Sbjct: 219 SLFREMSDKGICPNVGTFNILINGL--CVEGN---------------------------- 248
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
+A +L++M + G++P T++ + ++D I +G++
Sbjct: 249 -----LKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADV 303
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY + ++ L R + L + K+ + N +YN +I+ F K + A ++ E
Sbjct: 304 CTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNE 363
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M D++PN VT+N LI GHC + + LL + G + ++ T+ ++++ LC+ +
Sbjct: 364 MSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEK 423
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
FE A L M + I Y +LI LC G + +++L M D ++PD+ T+++
Sbjct: 424 FELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSS 483
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI FCR+ I+ A++ M GL + YS LI + G EA + + M NG
Sbjct: 484 LINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNG 543
Query: 461 CNPDSYTSNLILETLVQQGRFEEA 484
D +T N+++ +L + G+ EA
Sbjct: 544 HGADHFTCNVLVSSLCRDGKLGEA 567
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 205/493 (41%), Gaps = 1/493 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS Y +++ L K ++ A ++ D YN L+ C+ G + EA
Sbjct: 613 GQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEA 672
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFC-NAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ L +M P+ YTY+ L+ G C K V V M + PN LV
Sbjct: 673 VALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVD 732
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + P AF M++ + N ++ S +A M G P
Sbjct: 733 GLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCP 792
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+T++ + L + T ++ G+ P T+ L+ L K+G G + L
Sbjct: 793 NLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLL 852
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +++ ++N++I+ + + M +A ++ M + P+ T+N + +G K
Sbjct: 853 GKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKK 912
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ ++ +L +LE G P + ++I+ +CR + A EM G + +
Sbjct: 913 SAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAE 972
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+ ++R L G ++ + M R+ P I TF L+ FCR KI +A K M
Sbjct: 973 SAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMEL 1032
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL+ D +Y+ LI + +G A + + M P+ T ++++ + +
Sbjct: 1033 CGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQ 1092
Query: 484 AHDIVKTSKERGI 496
++ +ERG+
Sbjct: 1093 GEKLLTDLQERGL 1105
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 154/350 (44%), Gaps = 2/350 (0%)
Query: 141 FMEREPLTQKL--VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTG 198
M+ PL + V + L+ M A +G G+ P T + + +V
Sbjct: 152 LMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKD 211
Query: 199 LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY 258
+ +G+ P T+ +L+ L G + L + ++ V + +Y
Sbjct: 212 KRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTY 271
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
N +++ +CK A E+ M + I ++ T+N I C + K LL + +
Sbjct: 272 NTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRK 331
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
P++ T+N++I+ + + A +EM ++ + PN +TYN LI C +GD
Sbjct: 332 EMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEE 391
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+LRL M+A + + T+ L+ C+ K E A++ M + + +Y+ LI
Sbjct: 392 ALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLID 451
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
L K+G DEA Q +M ++G NPD T + ++ + G + A +I+
Sbjct: 452 GLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEII 501
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 4/215 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P YN + + L K ++ + + +M + P Y LI+G+CR+G +
Sbjct: 893 LGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQG 952
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +L +ME LG+ + + ++ G + + + VL+ M + P AT +L+H
Sbjct: 953 AFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMH 1012
Query: 124 GVFRCLDPHKAFELLIR-FMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
C D A L ++ ME L +V N L+ + N ++ A + +M R
Sbjct: 1013 RF--CRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDL 1070
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
P +T+ V + +L + +L +RG+
Sbjct: 1071 CPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 1105
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 114/284 (40%), Gaps = 35/284 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P ++++I L KS DL +M ++ D+FT+NILI+ G + +A
Sbjct: 824 GIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKA 883
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LV M LG P+ TY + +G E VL M E V P A +L++G
Sbjct: 884 FDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLING 943
Query: 125 VFRCLDPHKAFEL-----LIRFMEREPLTQKLV-----CN-------------------- 154
+ R D AF+L + F E +V C
Sbjct: 944 MCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPT 1003
Query: 155 -----TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
TL++R ++ +EA + M G + ++ + + D + +
Sbjct: 1004 IATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYE 1063
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
R + P +TY +L++A+ A ++G++ L + + L+S
Sbjct: 1064 EMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLIS 1107
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 16/178 (8%)
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTI----------------TYNILIRSLCAIGDVAR 378
L +A ++ A L + + G+ +I +++LIR G +
Sbjct: 122 LVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDY 181
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
++ F+ + P +YT N ++ S + + E F M G+ P+ +++ LI
Sbjct: 182 AVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILIN 241
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
L G +A ME+NG P T N +L ++GR++ A +++ +GI
Sbjct: 242 GLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGI 299
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 213/449 (47%), Gaps = 2/449 (0%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQM-EGLGYAP-NVYTYTILIDGFCNAKRVAE 98
CKPD F+Y IL+ G+C +AL L+ M + G P +V YT +I+G ++ +
Sbjct: 167 CKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDK 226
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
+ + + M +R P+ T S++ + + KA ++ R ++ + ++ +L++
Sbjct: 227 AYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVH 286
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
++ EA I +KM G P+ T+ + L E I D+ +KRG KP
Sbjct: 287 GYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKP 346
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
+TY L+ G VE L+ + K + + +NM++ + K N +D A +
Sbjct: 347 DSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVF 406
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
MR + + P++V + T++ C V L G P+ F ++I LC
Sbjct: 407 SNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTC 466
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+++ + EM++ G+ +TI +N ++ +LC G V + LF M I P+ T+
Sbjct: 467 DKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTY 526
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
N LI +C K+++A K M+ G++P + +Y+ +I ++GR ++ M+
Sbjct: 527 NTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDG 586
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDI 487
G NP T ++L+ L Q GR A ++
Sbjct: 587 KGVNPGIVTYEMLLQGLFQAGRTVAAKEL 615
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 210/458 (45%), Gaps = 8/458 (1%)
Query: 4 LGISPS----TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
LG P T L + D ++DL ++ +C D Y +I+G+ R G
Sbjct: 165 LGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKG--RCPLDVVAYTTVINGLLREG 222
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+D+A L M G +P+V TY+ +I + + + +V M + V P+
Sbjct: 223 QLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYT 282
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGD 178
SLVHG P +A + + M R + +V T L+ L N ++EA I +
Sbjct: 283 SLVHGYCSSGKPKEAIGIFKK-MCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVK 341
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
RG+ P+S+T+ + T L E +LD +K+G++ + ++M A K + E
Sbjct: 342 RGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDE 401
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+++ + L ++ +Y V+D C +D A ++ +APN+V F TLI
Sbjct: 402 ALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIH 461
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G C + K EL +++ G D FN+++ LC+ R +A + MV G+ P
Sbjct: 462 GLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEP 521
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
NT TYN LI C G + +++L M + + P T+N +I + + +IE
Sbjct: 522 NTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLL 581
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
M G+ P +Y L++ L ++GR AK+ +L M
Sbjct: 582 REMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 619
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/504 (22%), Positives = 223/504 (44%), Gaps = 12/504 (2%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHG-ICRIGVVDEAL 65
+P+ Y VI + +DLA+ ++ + + G +C G A+
Sbjct: 96 APNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAG--GRAM 153
Query: 66 RL---VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE-RNVCPNEATV-RS 120
R+ +++M LG P++++YTIL+ G C+ K + +L IM + + CP + +
Sbjct: 154 RMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTT 213
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+++G+ R KA+ L ++R P + ++++ LS +A + +M G
Sbjct: 214 VINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNG 273
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P+ + V + E GI + GV+P TY LM+ L K G+ E
Sbjct: 274 VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEAR 333
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + K + +Y ++ + + ++ M + + FN ++ +
Sbjct: 334 KIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAY 393
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K +V + + + + G PD + +++D LC A R +DAL + + G+ PN
Sbjct: 394 AKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNI 453
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ + LI LC + L +M I D FNA++ + C+ ++ +A+ F
Sbjct: 454 VVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDL 513
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ +G+ P+ +Y+ LI G+ DEA + M NG P T N I+ Q GR
Sbjct: 514 MVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGR 573
Query: 481 FEEAHDIVKTSKERGISFKSFPGL 504
E+ +++ +G++ PG+
Sbjct: 574 IEDGLTLLREMDGKGVN----PGI 593
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 184/418 (44%), Gaps = 35/418 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP Y+++I AL K+ ++D A F +M + PD Y L+HG C G EA
Sbjct: 238 GPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEA 297
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + K+M G P+V TYT L+D C + E ++ + + +R P+ T +L+HG
Sbjct: 298 IGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHG 357
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +LL M++ + N ++ + ++ EA + M
Sbjct: 358 YATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNM-------- 409
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++G+ P Y +++ L AGR + N
Sbjct: 410 ---------------------------RQQGLNPDIVNYGTVLDILCTAGRVDDALSQFN 442
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L N+ + +I C + D+ E+ EM DR I + + FN ++ CK
Sbjct: 443 SLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKG 502
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V + + L +++ G +P+ T+N++ID C + ++A+ L MV GV P+ +TYN
Sbjct: 503 RVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYN 562
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+I G + L L ++M ++P I T+ L+Q + + A++ + M+
Sbjct: 563 TIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMI 620
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI T +NA++ L K + A F M +P+ TYN LI G C G +DEA
Sbjct: 483 GICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEA 542
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+ M G P+ TY +I+G+ R+ + +L M + V P T L+ G
Sbjct: 543 MKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQG 602
Query: 125 VFRCLDPHKAFELLIRFMERE 145
+F+ A EL +R ++ +
Sbjct: 603 LFQAGRTVAAKELYLRMIKWD 623
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 10/127 (7%)
Query: 372 AIGDVARS-----LRLFQKM---QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
A+ DVAR+ + LF +M A +P+I T+ +I R+ +++ A ++T
Sbjct: 68 ALSDVARASPAVAISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVIT 127
Query: 424 LGLR--PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
GLR P+ S+ GR M + GC PD ++ ++L+ L
Sbjct: 128 TGLRHEPNPLQSSSQGPLCTAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTS 187
Query: 482 EEAHDIV 488
++A D++
Sbjct: 188 QQALDLL 194
>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 220/493 (44%), Gaps = 35/493 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ PS+ + L++ + + M +P +N +I G CR G V
Sbjct: 108 VGLRPSSSAITILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKV 167
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L+ M+ P+VY Y ILI+ +C + + + M + P+ T ++++
Sbjct: 168 GESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVIN 227
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
AF CN N M EA + M + G++P
Sbjct: 228 ----------AF-----------------CN------QGNMM--EARNLFDGMKEAGHIP 252
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ + V D+ + + + + V P +T+ +L+ Y+ GR+ + DR L
Sbjct: 253 NVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLL 312
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +S + YN+ + C +D A + +M ++ I P +V FN++I+ + +
Sbjct: 313 RDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRA 372
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
K + M+++ G P T +S+I L + R ++A D L EM+ G+P N +
Sbjct: 373 GLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAF 432
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+L+ +GDVA + L+ +M+ I PD F+A I + +++A F M
Sbjct: 433 TLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSK 492
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G P+NF Y++LI+ SGR EA M + G PD +T+N+I+ L ++GR +
Sbjct: 493 KGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKS 552
Query: 484 AHDIVKTSKERGI 496
A D+ + G+
Sbjct: 553 ASDVFRNMHHTGL 565
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 201/468 (42%), Gaps = 4/468 (0%)
Query: 7 SPSTRLYNAVIDAL-VKSNSID-LAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
P YN +I+A + + D L +++F M + C P T+ +I+ C G + EA
Sbjct: 181 QPDVYAYNILINAYCTRGQTFDALGWMRF--MIDNGCTPSLVTFGTVINAFCNQGNMMEA 238
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L M+ G+ PNV Y L++G+ A+ + + + E MK + V P+ T LV G
Sbjct: 239 RNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAG 298
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+R LL + L+ + N + L EA L M ++G P
Sbjct: 299 HYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPT 358
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F+ + + +K G+ P T L+ L K R E L
Sbjct: 359 VVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLY 418
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L N ++ +++D + ++ + A + EM R I P+ V F+ I+G
Sbjct: 419 EMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVG 478
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V + ++ + + + GF P+ F +NS+I C + R ++AL EM G+ P+ T N
Sbjct: 479 LVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTN 538
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+I LC G + + +F+ M + PDI T+N LI +C+ ++ M
Sbjct: 539 IIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYAT 598
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
G PD +Y+ + L + A + G PD+ T N ++
Sbjct: 599 GWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVM 646
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 200/449 (44%), Gaps = 46/449 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN +++ VK+ I A + +++M PD T+NIL+ G R G ++
Sbjct: 249 GHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDR 308
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL++ + G Y I + G C A + E + LE M E+ + P S++
Sbjct: 309 DRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAA 368
Query: 125 VFRCL---DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILR------- 174
R +KA+ ++++F L C++L+ LS EA +L
Sbjct: 369 YSRAGLEEKAYKAYRMMVKF---GLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGL 425
Query: 175 ---------------KMGD-------------RGYLPESSTFDYTVTCL-VTGLDLNETC 205
+MGD RG P++ F + L + GL ++E
Sbjct: 426 PINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGL-VDEAY 484
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
+ K+G P Y L+ +GR E + + L+ ++ + N++I+
Sbjct: 485 DVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGL 544
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
CK M A+++ R M + P++VT+NTLI G+CK + T E++ + G+ PD
Sbjct: 545 CKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDI 604
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV-ARSLRLFQ 384
T+N + LC + A+ L E++ GV P+T+TYN ++ +C DV R++ +
Sbjct: 605 TTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVCT--DVLERAMIVTA 662
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEK 413
K+ P++ T N L+ FC+ EK
Sbjct: 663 KLLKMAFVPNVVTANLLLSHFCKQGMPEK 691
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 157/377 (41%), Gaps = 39/377 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P+ +N++I A ++ + AY ++ M P T + LI G+ ++ + EA
Sbjct: 354 GITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEA 413
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M G N +T+L+DG+ VA + + M+ R + P+ + ++G
Sbjct: 414 RDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFING 473
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A+++ ++ ++ + V N+L+ N+ EA + R+M +G LP+
Sbjct: 474 LSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPD 533
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T + + L + + G+ P TY L++ KA V D +N
Sbjct: 534 IFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVN 593
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT-----------------------EICREM 281
++ ++ +YN+ + C M RA +C ++
Sbjct: 594 KMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVCTDV 653
Query: 282 RDRDI-----------APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+R + PN+VT N L+S CK KT L E F D+ +
Sbjct: 654 LERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQGMPEKTIMWGQKLNEISFGFDEIS--- 710
Query: 331 MIDCLCRAHR-FEDALD 346
I + RA+R +D +D
Sbjct: 711 -IKLMDRAYRNIQDNVD 726
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/461 (26%), Positives = 214/461 (46%), Gaps = 40/461 (8%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PST NA++ LV + +DLA F+ + PD +T+N +I G+CRIG + +A +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV---LEIMKERNVCPNEATVRSLVHG 124
K ++ G AP+V TY LIDG+C ++ V L+ M E + P T L++G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A + ++ + N+L+ L + E ++ +M D G P
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF C++ G F K+G+ + ++ M R+VE D
Sbjct: 334 EITFG----CVLKG------------FCKKGMMADANDWIDGMTE-----RNVEPD---- 368
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
V YN++ID + ++ M+ A + M + I+PN+ T+N LI+G +
Sbjct: 369 ----------VVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ LL + E G + D T+N +I LC A+ L EM E G+ PN +TYN
Sbjct: 419 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYN 478
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I+ C G++ + + +M+ R ++ T+N I+ FC++ K+++A ML
Sbjct: 479 TIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDK 538
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
L P+ +Y + + +++ G + + +S Q NP S
Sbjct: 539 CLVPNGITYETIKEGMMEKGYTPDIRGCTVS--QASENPAS 577
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 187/438 (42%), Gaps = 32/438 (7%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
+P + N L+ G+ VD A + + +P++YT+ +I G C ++ +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
V + +K + P+ AT SL+ G + + + +
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM---------------------- 250
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
+L++M + G P + TF + + + + ++G+
Sbjct: 251 ----------LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVV 300
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
TY L+ L G+ EG + + + L N ++ V+ FCK MM A + M
Sbjct: 301 TYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGM 360
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+R++ P++V +N LI + + ++ + + + G P+ T+N +I R+ +
Sbjct: 361 TERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDW 420
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
A L EM E G+ + +TYN+LI +LC G+V ++++L +M + P+ T+N +
Sbjct: 421 RSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
IQ FC I+ A + M R + +Y+ IK + G+ DEA M
Sbjct: 481 IQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCL 540
Query: 462 NPDSYTSNLILETLVQQG 479
P+ T I E ++++G
Sbjct: 541 VPNGITYETIKEGMMEKG 558
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 170/382 (44%), Gaps = 9/382 (2%)
Query: 113 PNEATVRSLVHGVF---RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEA 169
P+ ++V +L+ G+ R KAF +R R NT++ L +A
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALR---RRVSPDIYTFNTVISGLCRIGQLRKA 210
Query: 170 AAILRKMGDRGYLPESSTFDYTVT--CLVTGL-DLNETCGILDTFIKRGVKPRFSTYLLL 226
+ + + G P +T++ + C G ++ +L ++ G+ P T+ +L
Sbjct: 211 GDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVL 270
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ K R + + + ++V +YN +I C ++ ++ EM D +
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
+PN +TF ++ G CK + + + + E +PD +N +ID R + EDA+
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMA 390
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
M + G+ PN TYN LI GD + L +M+ I D+ T+N LI + C
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALC 450
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
++ KA K M +GL P++ +Y+ +I+ G A + ME+ +
Sbjct: 451 CKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVV 510
Query: 467 TSNLILETLVQQGRFEEAHDIV 488
T N+ ++ Q G+ +EA+D++
Sbjct: 511 TYNVFIKYFCQIGKMDEANDLL 532
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 167/381 (43%), Gaps = 46/381 (12%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAY---LKFQQMSVDQCKPDRFTYNILIHGICR 57
I G++PS YN++ID K Y + ++M P T+ +LI+G C+
Sbjct: 217 IKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCK 276
Query: 58 IGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
A+R+ ++M+ G A +V TY LI G C+ +V E +++E M++ + PNE T
Sbjct: 277 NSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEIT 336
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
++ G + A + + ER ++ N L+ +A A+ M
Sbjct: 337 FGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMA 396
Query: 178 DRGYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
+G P +T++ CL+TG D G+LD ++G++
Sbjct: 397 KKGISPNVTTYN----CLITGFSRSGDWRSASGLLDEMKEKGIE---------------- 436
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
++V +YN++I C + +A ++ EM + + PN +T+
Sbjct: 437 -------------------ADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTY 477
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
NT+I G C + E+ + +C + + T+N I C+ + ++A D L+EM++
Sbjct: 478 NTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD 537
Query: 354 WGVPPNTITYNILIRSLCAIG 374
+ PN ITY + + G
Sbjct: 538 KCLVPNGITYETIKEGMMEKG 558
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 123/247 (49%), Gaps = 3/247 (1%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+ +S N ++ +D A + R R ++P++ TFNT+ISG C+ ++ K ++
Sbjct: 155 STSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVA 214
Query: 314 VMLLECGFKPDKFTFNSMIDCLCR---AHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+ G P T+NS+ID C+ A L EMVE G+ P +T+ +LI
Sbjct: 215 KDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGY 274
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C + A ++R+F++M+ I+ + T+N+LI C K+E+ K M LGL P+
Sbjct: 275 CKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNE 334
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
++ ++K K G +A M + PD N++++ + G+ E+A + +
Sbjct: 335 ITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEA 394
Query: 491 SKERGIS 497
++GIS
Sbjct: 395 MAKKGIS 401
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 148/319 (46%), Gaps = 7/319 (2%)
Query: 183 PESSTFDYTVTCLVTG--LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P +S+ + + LV +DL E + ++R V P T+ ++ L + G+ +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKA--FRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCK---VNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ L +V +YN +ID +CK M + +EM + I+P VTF LI
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
+G+CK++ + + + G T+NS+I LC + E+ + + EM + G+
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
PN IT+ +++ C G +A + M + PD+ +N LI + R+ K+E A
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAV 391
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
+M G+ P+ +Y+ LI +SG + A M++ G D T N+++ L
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451
Query: 478 QGRFEEAHDIVKTSKERGI 496
+G +A ++ E G+
Sbjct: 452 KGEVRKAVKLLDEMSEVGL 470
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 155/321 (48%), Gaps = 18/321 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP+ + +I+ K+++ A F++M TYN LI G+C G V+E
Sbjct: 259 GISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEG 318
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+++ME LG +PN T+ ++ GFC +A+ ++ M ERNV P + + +++
Sbjct: 319 VKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEP-DVVIYNILID 377
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
V+R L + + M ++ ++ + N L+ S + A+ +L +M ++G
Sbjct: 378 VYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEA 437
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + L ++ + +LD + G++P TY +++ G
Sbjct: 438 DVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIR 497
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ K R +NV +YN+ I FC++ MD A ++ EM D+ + PN +T+ T+ G
Sbjct: 498 TRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG---- 553
Query: 304 AEVHKTRELLVMLLECGFKPD 324
++E G+ PD
Sbjct: 554 ------------MMEKGYTPD 562
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
RP S +AL+ L+ + R D A++ F S + +PD YT N ++ L + G+ +A D
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 487 IVKTSKERGIS 497
+ K K G++
Sbjct: 213 VAKDIKAWGLA 223
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/498 (25%), Positives = 226/498 (45%), Gaps = 35/498 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P N ++ LV+ D A + +M ++ D ++ +++ G+C G+V++
Sbjct: 219 GTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKG 278
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L++ G G PN Y +LIDG+C V +L M+ + + P T +L+
Sbjct: 279 LKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSW 338
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R D K LL ER + N+++ L AS+A +L++M G P+
Sbjct: 339 LGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPD 398
Query: 185 SSTFDYTVTCL---------------VTGLDLNE--------------------TCGILD 209
+ TF ++ L T +LN +L
Sbjct: 399 AITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLV 458
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
++RG P T+ L+ L AG+ E + +L+ + N YN++I CK
Sbjct: 459 EMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKK 518
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
M+ A + EM ++++ P+ + TLI G ++ + + R++ + + G PD +N
Sbjct: 519 MLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYN 578
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+MI C+ +A++C+S M + G P+ TY LI G+++ +L L M
Sbjct: 579 AMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKR 638
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
R P++ +++LI +C++ + AE F SM + GL P+ +Y+ LI +L K + A
Sbjct: 639 RCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRA 698
Query: 450 KQTFLSMEQNGCNPDSYT 467
F M N C+P+ YT
Sbjct: 699 AMYFEYMLLNQCSPNDYT 716
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/506 (25%), Positives = 219/506 (43%), Gaps = 17/506 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y ++ L + ++ +M + P+ YN +I +C+ +A
Sbjct: 324 GLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQA 383
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++KQM G P+ T++ LI G C RV E R+L + PN ++ SL+HG
Sbjct: 384 LVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHG 443
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A LL+ MER + L++ L SEA + KM R LP+
Sbjct: 444 FCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPD 503
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ ++ ++ L L +++ +++ V P Y L++ + E +
Sbjct: 504 ANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFE 563
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + +V YN +I +C+ MM+ A E MR P+ T+ TLI G+ K
Sbjct: 564 FMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQG 623
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL-SEMVEWGVPPNTITY 363
+ LL +++ +P+ ++S+I+ C+ DA +CL M G+ PN ITY
Sbjct: 624 NISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGD-TDAAECLFGSMESQGLFPNVITY 682
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR-MNKIEKAE------- 415
ILI SL V R+ F+ M ++ SP+ YT ++L+ C M I +
Sbjct: 683 TILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNL 742
Query: 416 -------KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
F +++ P N +Y+A+I +L EA M G PDS T
Sbjct: 743 HGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATF 802
Query: 469 NLILETLVQQGRFEEAHDIVKTSKER 494
+L G+ E I+ +R
Sbjct: 803 LSLLYGFCSVGKSREWRTILPNEFQR 828
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 141/296 (47%)
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
D+ +L +G+ P TY LM L + G + L+ + + RL NV YN
Sbjct: 309 DVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYN 368
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
VID CK +A + ++M P+ +TF+TLISG C++ V + LL
Sbjct: 369 SVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRW 428
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
P+ ++ S+I C A + L EM+E G P+ +T+ LI L G V+ +
Sbjct: 429 ELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEA 488
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
L + +KM A ++ PD +N LI C+ + A ML + PD + Y+ LI
Sbjct: 489 LLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDG 548
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
I++ DEA++ F MEQ G +PD N +++ Q G EA + + T ++ G
Sbjct: 549 FIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVG 604
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 4/226 (1%)
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
D A ++ EM + + + ++ G C + V K +L+ G P+ +N +
Sbjct: 241 DDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
ID CR + L EM G+ P +TY L+ L GD+ + L +M+ R+
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
P++ +N++I + C+ +A M G PD ++S LI L + GR EA++
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAER 420
Query: 452 TFLSMEQNGCNPD--SYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ NP+ SYTS ++ +G A +++ ERG
Sbjct: 421 LLRETTRWELNPNLSSYTS--LIHGFCVRGEVIVASNLLVEMMERG 464
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 122/315 (38%), Gaps = 60/315 (19%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P +Y +ID +++ S+D A F+ M PD YN +I G C+ G+++EA+
Sbjct: 535 VHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAV 594
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M +G P+ +TYT LI G+ ++ +L M +R PN SL++G
Sbjct: 595 ECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGY 654
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMGDRGYLPE 184
+ D A E L ME + L ++ T+L L AA M L +
Sbjct: 655 CKLGDTDAA-ECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYM----LLNQ 709
Query: 185 SSTFDYTVTCLVTGL----------------DLNETCGILDTF----------------- 211
S DYT+ LVTGL +L+ +LD F
Sbjct: 710 CSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNA 769
Query: 212 ---------------------IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+G KP +T+L L+ G+ E L + F+
Sbjct: 770 IIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTILPNEFQRD 829
Query: 251 LVSNVNSYNMVIDCF 265
+ + Y ++ D +
Sbjct: 830 ELEVASRYKILFDQY 844
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 86/202 (42%), Gaps = 19/202 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P Y +I K +I A M +C+P+ Y+ LI+G C++G D
Sbjct: 603 VGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDA 662
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L ME G PNV TYTILI +V E M PN+ T+ SLV
Sbjct: 663 AECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVT 722
Query: 124 GVFRCL------------DPHKAFELLIRFMER-----EPLTQKLVCNTLLYRLSNNSMA 166
G+ + + H LL F +P N +++ L ++M
Sbjct: 723 GLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAY--NAIIFSLCIHNML 780
Query: 167 SEAAAILRKMGDRGYLPESSTF 188
EA + KM ++GY P+S+TF
Sbjct: 781 GEALDLKNKMANKGYKPDSATF 802
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 211/472 (44%), Gaps = 50/472 (10%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F++M + C P+ TYN +I G C++ DEA ++ M G PN+ T+ ++I+G C
Sbjct: 6 FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCR 65
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
R+ E VL M + P+E T +LV+G + + H+A L
Sbjct: 66 DGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVL--------------- 110
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
A ++R G P T+ + + +LN D
Sbjct: 111 ----------------HAEMVRN----GLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMH 150
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
RG+ P TY ++ + G E R LN + + + ++ +YN +I+ C + M+
Sbjct: 151 VRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRME 210
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + ++M + + P++V+++T+ISG ++ E+ + ++ V ++ PD T++S+I
Sbjct: 211 EAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLI 270
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
LC R +A D EM+ +PP+ TY LI + C GD+ ++L L +M
Sbjct: 271 QGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFL 330
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK-----------ALI 441
PD T+N LI + + ++A + + P +Y+ LI+ AL+
Sbjct: 331 PDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALV 390
Query: 442 KS----GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
K G DEA Q F SM P+ N+I+ + G +A+ + K
Sbjct: 391 KGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYK 442
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/510 (22%), Positives = 232/510 (45%), Gaps = 21/510 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN +ID K D A+ + M + +P+ T+N++I+G+CR G + E
Sbjct: 13 GCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKET 72
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +M GY P+ TY L++G+C + + M + PN T SL++
Sbjct: 73 SEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINS 132
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + ++A E + R + T++ + + EA +L +M G++P
Sbjct: 133 MCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPS 192
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + E G+L + +GV P +Y ++ R+ E DR
Sbjct: 193 IVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGF---ARNQELDRAFQ 249
Query: 245 ---HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ ++ + +Y+ +I C+ + A ++ +EM + P+ T+ TLI+ +C
Sbjct: 250 MKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYC 309
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K+ +++K L +++ GF PD T+N +I+ L + R ++A L ++ P+ +
Sbjct: 310 KEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAV 369
Query: 362 TYNILIRSLCAI---------------GDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
TYN LI + C I G + + ++F+ M P+ +N +I C
Sbjct: 370 TYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHC 429
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R+ + KA K + M+ + P + AL+KAL G E + + ++ D+
Sbjct: 430 RIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAE 489
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGI 496
S +++E ++G + +++ + G+
Sbjct: 490 LSKVLVEINQKEGNMDMVFNLLTEMAKDGL 519
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 141/286 (49%), Gaps = 35/286 (12%)
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
G R+ + ++ + NV +YN +ID +CK+ D A R M + + PNL+TFN +I+
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G C+D + +T E+LV + G+ PD+ T+N++++ C+ F AL +EMV G+ P
Sbjct: 62 GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD------------------------ 394
N +TY LI S+C G++ R++ F +M + P+
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181
Query: 395 -----------IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
I T+NALI C + ++E+A M+ G+ PD SYS +I ++
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
D A Q + M PD+ T + +++ L +Q R EA D+ +
Sbjct: 242 QELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQ 287
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 113/218 (51%)
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
+EM PN+VT+NT+I G+CK + L + G +P+ TFN +I+ LCR
Sbjct: 7 KEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRD 66
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
R ++ + L EM G P+ +TYN L+ C G+ ++L L +M + +SP++ T+
Sbjct: 67 GRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTY 126
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+LI S C+ + +A + F M GL P+ +Y+ +I + G DEA + M +
Sbjct: 127 TSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTR 186
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+G P T N ++ GR EEA +++ +G+
Sbjct: 187 SGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGV 224
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/309 (18%), Positives = 127/309 (41%), Gaps = 15/309 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y+ +I ++ +D A+ +M PD TY+ LI G+C + EA
Sbjct: 223 GVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEA 282
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++M + P+ +TYT LI+ +C + + + + M ++ P+ T L++G
Sbjct: 283 CDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLING 342
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN---------------NSMASEA 169
+ + +A LL++ + + + NTL+ N + EA
Sbjct: 343 LNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEA 402
Query: 170 AAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEA 229
+ M ++ + P + ++ + ++ + + + P T L L++A
Sbjct: 403 DQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKA 462
Query: 230 LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
L+ G D E + + + + +++ ++++ K MD + EM + P+
Sbjct: 463 LFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPS 522
Query: 290 LVTFNTLIS 298
T I+
Sbjct: 523 TGTPTNAIA 531
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%)
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F M G P+ +Y+ +I K R DEA SM G P+ T N+I+ L +
Sbjct: 6 FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCR 65
Query: 478 QGRFEEAHDIVKTSKERG 495
GR +E +++ +G
Sbjct: 66 DGRLKETSEVLVEMSRKG 83
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 214/488 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T YNA++ K+ A ++M + C D TYN L+ R G EA
Sbjct: 311 GYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEA 370
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ M G PN TYT +ID + A + E ++ MKE PN T +++
Sbjct: 371 AGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSL 430
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + ++ ++L + NT+L N M + R+M G+ P+
Sbjct: 431 LGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPD 490
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ ++ + + + G +TY L+ AL + G G+ ++
Sbjct: 491 RDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVIS 550
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ SY++++ C+ K I +++ I P+ + TL+ + K
Sbjct: 551 DMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCR 610
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + + G+KPD FNSM+ R + ++ A L + E G+ P+ +TYN
Sbjct: 611 ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYN 670
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ G+ ++ + + ++ ++ PD+ ++N +I+ FCR +++A + M
Sbjct: 671 SLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTER 730
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+RP F+Y+ + G F E + M +N C P+ T ++++ + G++ EA
Sbjct: 731 GIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Query: 485 HDIVKTSK 492
D V K
Sbjct: 791 MDFVSKIK 798
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/486 (23%), Positives = 221/486 (45%), Gaps = 42/486 (8%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVA-EVFRV 102
D Y ++H R G ++A+ L ++M+ +G +P + TY +++D F R ++ V
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 103 LEIMKERNVCPNEATVRSLVHGVFR--CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
L+ M+ + + +E T +++ R L K F ++ EP T + N LL
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGT--VTYNALLQVF 326
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
+ +EA ++L++M + +S T++ V V E G+++ K+GV P
Sbjct: 327 GKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNA 386
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY +++A KAG++ E + + + V N +YN V+ K + + ++ +
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHK-TRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
M+ +PN T+NT+++ C + + K + + CGF+PD+ TFN++I R
Sbjct: 447 MKSNGCSPNRATWNTMLA-LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCG 505
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
DA EM G TYN L+ +L GD + M++ P +++
Sbjct: 506 SEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYS 565
Query: 400 ALIQSFCR------MNKIEK-----------------------------AEKAFFSMLTL 424
++Q + + + +IE +E+AF
Sbjct: 566 LMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKH 625
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G +PD +++++ ++ +D+A+ S+ ++G +PD T N +++ V++G +A
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 485 HDIVKT 490
+I+KT
Sbjct: 686 EEILKT 691
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 124/247 (50%), Gaps = 5/247 (2%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+V +Y ++ + + ++A ++ M++ +P LVT+N ++ K R++L
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMG--RSWRKIL 266
Query: 314 VMLLEC---GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+L E G K D+FT ++++ R +A + +E+ G P T+TYN L++
Sbjct: 267 GVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVF 326
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
G +L + ++M+ + D T+N L+ ++ R ++A M G+ P+
Sbjct: 327 GKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNA 386
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+Y+ +I A K+G+ DEA + F SM++ GC P++ T N +L L ++ R E ++
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 491 SKERGIS 497
K G S
Sbjct: 447 MKSNGCS 453
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP YN+++D V+ A + + Q KPD +YN +I G CR G++ EA
Sbjct: 661 GLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEA 720
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+R++ +M G P ++TY + G+ AE+ V+E M + + PNE T + +V G
Sbjct: 721 VRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDG 780
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
R +A + + + +P L R+ N
Sbjct: 781 YCRAGKYSEAMDFVSKIKTFDPCFDDQSIQRLALRVREN 819
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/424 (20%), Positives = 161/424 (37%), Gaps = 56/424 (13%)
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
ER V E V S G + LD H+ E+ +R + RE S S
Sbjct: 153 ERAVFLFEWLVLSSNSGALK-LD-HQVIEIFVRILGRE------------------SQYS 192
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
AA +L K+ + YL + + + + + + + G P TY +++
Sbjct: 193 VAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVIL 252
Query: 228 EALYKAGRDVEGD-RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ K GR L+ + L + + + V+ + ++ A E E++
Sbjct: 253 DVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGY 312
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P VT+N L+ K + +L + E D T+N ++ RA ++A
Sbjct: 313 EPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAG 372
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ--- 403
+ M + GV PN ITY +I + G +L+LF M+ P+ T+NA++
Sbjct: 373 VIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLG 432
Query: 404 -------------------------------SFCRMNKIEK-AEKAFFSMLTLGLRPDNF 431
+ C ++K + F M + G PD
Sbjct: 433 KKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRD 492
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
+++ LI A + G +A + + M + G N T N +L L ++G + +++
Sbjct: 493 TFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDM 552
Query: 492 KERG 495
K +G
Sbjct: 553 KSKG 556
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/319 (18%), Positives = 125/319 (39%), Gaps = 41/319 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P +N +I A + S A + +M+ TYN L++ + R G
Sbjct: 486 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 545
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ M+ G+ P +Y++++ + + R+ +KE + P+ +R+L+
Sbjct: 546 ENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLA 605
Query: 125 VFRC---LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
F+C +AF L + + + ++ N++L + N+M +A IL + + G
Sbjct: 606 NFKCRALAGSERAFTLFKKHGYKPDM---VIFNSMLSIFTRNNMYDQAEGILESIREDGL 662
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P+ T++ + V + + IL T K +KP +Y +++ + G E R
Sbjct: 663 SPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVR 722
Query: 242 YLNHVFKDRLVSNVNSYN-----------------------------------MVIDCFC 266
L+ + + + + +YN MV+D +C
Sbjct: 723 MLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYC 782
Query: 267 KVNMMDRATEICREMRDRD 285
+ A + +++ D
Sbjct: 783 RAGKYSEAMDFVSKIKTFD 801
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 224/485 (46%), Gaps = 40/485 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDL---AYLKFQQMSVDQCKPDRFTYNILIHGIC-RIGV 60
G +P +Y+ +++A A Q + C D N++++ +C + G
Sbjct: 145 GCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGS 204
Query: 61 VDEALRLVKQME-GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
VDEALRL++ + G P+V +Y ++ G C AKR V ++E M PN T
Sbjct: 205 VDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTF- 263
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
NTL+ L N + +L +M D
Sbjct: 264 ----------------------------------NTLIGYLCRNGLFERVHQVLAQMVDH 289
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G P+ + + + L ILD G+KP Y +++ L A R +
Sbjct: 290 GCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQA 349
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ L +F + + ++N+++D FC+ ++ R E+ +M + P+++T+ T+I+G
Sbjct: 350 EELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVING 409
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK+ + + LL + CG +P+ ++ ++ LC A R+ DA D +S+M+E G PN
Sbjct: 410 FCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPN 469
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+T+N +I LC G V +++ L ++M + SPD+ +++ +I + K ++A +
Sbjct: 470 PVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLN 529
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M+ G+ P+ YS++ AL K GR + Q F +++ D+ N ++ +L ++G
Sbjct: 530 VMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRG 589
Query: 480 RFEEA 484
+ A
Sbjct: 590 GTDRA 594
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 200/458 (43%), Gaps = 49/458 (10%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
YN ++ G CR G + A RL + PN YTY ++ C R+A+ VL+ M+
Sbjct: 86 YNAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMR 142
Query: 108 ERNVCPN--------EATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
R P EA G FR A +L R CN +L
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFR-----SAVRVLQDLHGRGCALDVGNCNLVLNA 197
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
+ + + + A LR + D LP S G P
Sbjct: 198 VCDQGGSVDEA--LRLLRD---LPTSF----------------------------GCDPD 224
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
+Y +++ L A R + + + NV ++N +I C+ + +R ++
Sbjct: 225 VVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLA 284
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
+M D P++ + T++ G CK+ + E+L + G KP+ +N+++ LC A
Sbjct: 285 QMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAE 344
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
R+E A + L+EM + P + +T+NIL+ C G V R + L ++M PD+ T+
Sbjct: 345 RWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYT 404
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
+I FC+ I++A SM G RP+ SY+ ++K L + R+ +A+ M +
Sbjct: 405 TVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQ 464
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
GC+P+ T N ++ L ++G E+A +++K G S
Sbjct: 465 GCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCS 502
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 192/428 (44%), Gaps = 35/428 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P+ +N +I L ++ + + QM C PD Y ++ G+C+ G ++
Sbjct: 254 VGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEV 313
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ +M G PNV Y ++ G C+A+R + +L M + N CP
Sbjct: 314 AHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFD-NDCP---------- 362
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
LD F +L+ F + N L+YR+ +L +M + G +P
Sbjct: 363 -----LD-DVTFNILVDFFCQ---------NGLVYRV---------IELLEQMLEHGCVP 398
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ + ++E +L + G +P +Y ++++ L A R V+ + +
Sbjct: 399 DVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLM 458
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + N ++N VI+ CK ++++A E+ ++M +P+L++++T+I G K
Sbjct: 459 SQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKA 518
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + ELL +++ G P+ ++S+ L + R + + + + + + Y
Sbjct: 519 GKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLY 578
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N +I SLC G R++ M + P+ T+ LI+ +++A++ + +
Sbjct: 579 NAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCS 638
Query: 424 LGLRPDNF 431
G +F
Sbjct: 639 KGALRKHF 646
>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
Length = 845
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/507 (25%), Positives = 234/507 (46%), Gaps = 34/507 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P YN +I A+ F+ M C+P TYNIL+ +C G + EA
Sbjct: 248 GIAPDVCSYNILIKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEA 307
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT------- 117
RL +M +G N T+ +LIDG+ + ++ + M+ R + P+ T
Sbjct: 308 RRLFDEMAQVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAAR 367
Query: 118 ------VRSLVHG----------------VFRCLDPHK---AFELLIRFMEREPLTQKLV 152
LVH V R H+ A+ELL+ +E+ +
Sbjct: 368 AHKFGYAAQLVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTG 427
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
N L+ S + EA+ + R M G P SSTF+Y + L L+E +L+ +
Sbjct: 428 FNALIAAYSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMV 487
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+G +++ + ++A ++ G V + + + L ++ +++ I+ C+++ ++
Sbjct: 488 SKGYCLS-TSFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVN 546
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + EM R I PN +T+N++IS CK + + +L+ + + G PD +T N +I
Sbjct: 547 EAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILI 606
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
D LCR + + + L +M G+ P+T+TYN +I + C D+ ++ KM
Sbjct: 607 DGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCE 666
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PDI+T+N + S CR + + +A K ++ + P++ +Y+ L+ I S D A
Sbjct: 667 PDIFTYNIWMHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDG-ICSDVLDRAMIL 725
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQG 479
+ + P++ T N+ L +QG
Sbjct: 726 TGRLIKMAFKPNTITLNVFLSHFCKQG 752
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 223/531 (41%), Gaps = 71/531 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +PS +A++ L +S + A+ F++M+ + +P T+N ++ G C G+V A
Sbjct: 178 GNTPSLSALSALLRLLFRSGEVRAAWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVA 237
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G AP+V +Y ILI G C + F++ E M P T LV
Sbjct: 238 SGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDV 297
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A L + + N L+ + + +A+A R+M RG +P+
Sbjct: 298 LCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPD 357
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG----- 239
S TF+ R K ++ L+ ++ + +G
Sbjct: 358 SCTFNIIAA--------------------RAHKFGYAAQLVHDHDMFSSHMSADGLDMLV 397
Query: 240 -----DRYLNHVFKDRLVS-------NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
D L+ ++ L + V +N +I + K + + A+E+ R M +A
Sbjct: 398 CRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYRIMNKLGLA 457
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELL---------------------------VMLLEC- 319
P+ TFN LI G C + + + LL V L+C
Sbjct: 458 PSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDAYFRDGNAVGALKCW 517
Query: 320 ------GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
G + D F++ I+ LCR +A +EM G+ PN ITYN +I +LC
Sbjct: 518 DDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKA 577
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G++ +L+L Q M+ + PDIYT N LI CR K++ + M + GL PD +Y
Sbjct: 578 GNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTY 637
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ +I A ++ + A M GC PD +T N+ + +L + +A
Sbjct: 638 NTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQA 688
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 142/332 (42%), Gaps = 3/332 (0%)
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
MA+EA +L ++ G P S + L ++ + + G +P +T+
Sbjct: 162 GMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEMTAEGPRPSLATF 221
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
++ G L + K + +V SYN++I C A ++ M
Sbjct: 222 NAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSRDAFKMFEGMHR 281
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
P +VT+N L+ C + + + R L + + G + + TFN +ID ++ + +
Sbjct: 282 SGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDGYAKSGQMDQ 341
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A EM G+ P++ T+NI+ G A+ L M + +S D + L+
Sbjct: 342 ASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQ-LVHDHDMFSSHMSAD--GLDMLVC 398
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
C ++++ A + + G+ ++ALI A K G +EA + + M + G P
Sbjct: 399 RLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYRIMNKLGLAP 458
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
S T N ++ L QGR +EA +++ +G
Sbjct: 459 SSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKG 490
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%)
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
+ + F M A ++ +R P+L + L+ + EV + +
Sbjct: 153 LALHAFLAAGMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEMTAE 212
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G +P TFN+M+ C A L M + G+ P+ +YNILI+ C G +
Sbjct: 213 GPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSRDA 272
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
++F+ M P + T+N L+ C ++ +A + F M +G++ + +++ LI
Sbjct: 273 FKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDG 332
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
KSG+ D+A + M+ G PDS T N+I
Sbjct: 333 YAKSGQMDQASAAYREMQARGLVPDSCTFNII 364
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 3/226 (1%)
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + EM P+L TFN ++ G C V LL ++ + G PD ++N +I
Sbjct: 202 AWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIK 261
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
C DA M G P +TYNIL+ LC G + + RLF +M I
Sbjct: 262 GHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQV 321
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
+ TFN LI + + ++++A A+ M GL PD+ +++ +I A ++ +F A Q
Sbjct: 322 NTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFN-IIAA--RAHKFGYAAQLV 378
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
+ + + ++++ L R ++A +++ + E+G+ +
Sbjct: 379 HDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLR 424
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 116/258 (44%), Gaps = 1/258 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ ++A I+ L + + ++ AY F +M+ P+ TYN +I +C+ G + E
Sbjct: 523 IGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTE 582
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL+LV+ M G P++YT ILIDG C ++ V +L M + P+ T ++++
Sbjct: 583 ALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIIN 642
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
R D + A + + + N ++ L N M ++A +L ++ P
Sbjct: 643 AYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQAGKLLDELVAVDCSP 702
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
S T++ + + + + L+ + IK KP T + + K G +
Sbjct: 703 NSVTYNTLMDGICSDV-LDRAMILTGRLIKMAFKPNTITLNVFLSHFCKQGFGNRALMWA 761
Query: 244 NHVFKDRLVSNVNSYNMV 261
+ +D V + + N++
Sbjct: 762 EKLREDSFVFDGATRNII 779
>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 525
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/494 (24%), Positives = 222/494 (44%), Gaps = 34/494 (6%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P VI+ L + M +P T+ LI+G+C G V
Sbjct: 36 LGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGA 95
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A R +E +GY N YT+ +I+G C A LE ++ RN
Sbjct: 96 AARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRN------------- 142
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ F+LLI + +T++ L + M A M +G P
Sbjct: 143 ---------RGFDLLIAY------------STIMDSLCKDGMLCLALNFFSGMTCKGIQP 181
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + L + NE +L +++G+ P T+ +L++ K G+ +
Sbjct: 182 DLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIM 241
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +V +YN VI C ++ M+ A ++ M + + PN+VT+++LI G CK
Sbjct: 242 CFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKT 301
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++K +L ++ G D T++++I C+A R E A++ M E PN T
Sbjct: 302 RNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTC 361
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
I++ L + ++ LF+KM+ + +I T+N ++ C K A + F + +
Sbjct: 362 AIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPS 421
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G++ D +Y+ +IK L K G D+A+ + ME+NGC P+ +T N+++ L+Q+
Sbjct: 422 KGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISR 481
Query: 484 AHDIVKTSKERGIS 497
+ + K +G+S
Sbjct: 482 STKYLMLMKGKGLS 495
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 176/412 (42%), Gaps = 46/412 (11%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y+ ++D+L K + LA F M+ +PD YN LIHG+C G +EA L+ M
Sbjct: 151 YSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMM 210
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL--- 129
G PNV T+ +L+D FC +++ ++ M V P+ T S++ G CL
Sbjct: 211 RKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISG--HCLLSQ 268
Query: 130 --DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D K FEL+I +G LP T
Sbjct: 269 MNDAVKVFELMIH--------------------------------------KGLLPNVVT 290
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + ++N+ +LD + G+ T+ L+ KAGR +
Sbjct: 291 YSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMH 350
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ + N+ + +++D K A + R+M ++ N+VT+N ++ G C + +
Sbjct: 351 EHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFN 410
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
REL L G + D + +MI LC+ +DA D L +M E G PPN TYN+L+
Sbjct: 411 DARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLV 470
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
R L D++RS + M+ +S D T LI F NK A + F
Sbjct: 471 RGLLQRYDISRSTKYLMLMKGKGLSADATTTELLISYF-SANKENSALQVFL 521
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ + ++D L K A F++M + + TYNI++ G+C G ++A L
Sbjct: 356 PNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDAREL 415
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ G +V YT +I G C + + +L M+E PNE T LV G+ +
Sbjct: 416 FSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQ 475
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
D ++ + L+ + L+ S N S L+K
Sbjct: 476 RYDISRSTKYLMLMKGKGLSADATTTELLISYFSANKENSALQVFLQK 523
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+PP+ + L + + A ++ L + + + PD++T +I C +
Sbjct: 4 LPPDK-DFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGF 62
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+M +G+ P +++ LI L G A + S+E G +SYT I+ L
Sbjct: 63 SVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGL 122
Query: 476 VQQG 479
+ G
Sbjct: 123 CKVG 126
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI Y +I L K +D A +M + C P+ FTYN+L+ G+ + + +
Sbjct: 423 GIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRS 482
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKR 95
+ + M+G G + + T +LI F K
Sbjct: 483 TKYLMLMKGKGLSADATTTELLISYFSANKE 513
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/520 (24%), Positives = 229/520 (44%), Gaps = 27/520 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP T +N +I L S +D A F +M C+P+ +++ IL+ G CR G +
Sbjct: 51 GVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKG 110
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+ +M LG++PN Y LI FC + + ++++ M++ + P+ T + +
Sbjct: 111 LELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISA 170
Query: 125 V---FRCLDPHKAF-ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + L+ + F ++ I + P + N +L M EA A+ KM
Sbjct: 171 LCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSE 230
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
L +++ + LV L E +L + G++P +Y ++M+ L K G +
Sbjct: 231 NLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDAR 290
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + ++ + +Y ++ +C + A + REM +PN T N L+
Sbjct: 291 MLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSL 350
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP--- 357
K+ + + ELL + E G+ D T N +ID LC + + A++ ++ M G
Sbjct: 351 WKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALG 410
Query: 358 --------------------PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
P+ I+Y+ +I LC G V + + F +M + PD
Sbjct: 411 NLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAI 470
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
++ I SFC+ KI A + M G +Y++LI L + E M
Sbjct: 471 YDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMR 530
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ G +PD N +L +L + GR ++A ++ ++GIS
Sbjct: 531 ERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGIS 570
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 132/523 (25%), Positives = 238/523 (45%), Gaps = 39/523 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS LYN ++ + K +D + M P+ +T+N+LI +C G +D+A L
Sbjct: 19 PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+M G PN Y++ IL+ G+C A ++ +L M+ PN+ +L+ +
Sbjct: 79 FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKM--GDRGYLPE 184
A E L+ M ++ L+ +V N + L ++ EA+ I R M + LP+
Sbjct: 139 EGKTDDA-EKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQ 197
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDT----FIKRGVKPRF---STYLLLMEALYKAGRDV 237
+ Y L+ G E G+L+ F K V +Y + + L + G+ +
Sbjct: 198 PNIITYN---LMLGGFCKE--GMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLL 252
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E L + + NV SYN+V+D CK ++ A + R M + P+ VT+ TL+
Sbjct: 253 EAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLL 312
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G+C +V + +L ++ G P+ +T N ++ L + R +A + L +M E G
Sbjct: 313 HGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYV 372
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQA-----------------------DRISPD 394
+T+T NI+I LC G + +++ + M + PD
Sbjct: 373 IDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPD 432
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+ +++ +I C+ ++ +A+K F M+ L+PD+ Y I + K G+ A +
Sbjct: 433 LISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLK 492
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
ME+ GCN T N ++ L + + E + ++ +ERG+S
Sbjct: 493 DMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVS 535
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 128/512 (25%), Positives = 228/512 (44%), Gaps = 30/512 (5%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ YN ++ K ++ A F++M V + +R +YNI + G+ RIG + EA +
Sbjct: 198 PNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLV 257
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+K+M +G PNVY+Y I++DG C + + ++ +M V P+ T +L+HG
Sbjct: 258 LKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCH 317
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+A +L M CN LLY L SEA +L+KM ++GY+ ++ T
Sbjct: 318 TGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVT 377
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVK-----------------------PRFSTYL 224
+ + L L++ I++ G P +Y
Sbjct: 378 CNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYS 437
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
++ L KAGR E + + L + Y++ I FCK + A + ++M +
Sbjct: 438 TIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKK 497
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
L T+N+LI G ++ + L+ + E G PD +N+++ LC R +DA
Sbjct: 498 GCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDA 557
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ---KMQADRISPDIYTFNAL 401
L EM++ G+ PN +++ILI++ C D + +F+ + + + TFN L
Sbjct: 558 PSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNEL 617
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
+ ++ KA++ F + L NF Y LI L K + D+A + G
Sbjct: 618 LVG----GEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGY 673
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
D + +++ L ++G EA ++ + E
Sbjct: 674 WFDPASFMPVIDGLGKRGNKHEADELAEKMME 705
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 131/525 (24%), Positives = 226/525 (43%), Gaps = 28/525 (5%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG SP+ +YN +I + K D A +M D PD T+N I +C G V E
Sbjct: 120 LGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLE 179
Query: 64 ALRLVKQM---EGLGY-APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
A R+ + M E LG PN+ TY +++ GFC + E + E MK N +
Sbjct: 180 ASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYN 239
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+ G+ R +A +L ++ N ++ L N + +A ++R M
Sbjct: 240 IWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSS 299
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G LP++ T+ + ++E +L ++ G P T +L+ +L+K GR E
Sbjct: 300 GVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEA 359
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA------------ 287
+ L + + V + + N+VID C +D+A EI M A
Sbjct: 360 EELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGL 419
Query: 288 -----------PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
P+L++++T+ISG CK V + ++ + ++ +PD ++ I C
Sbjct: 420 VDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFC 479
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
+ + A L +M + G TYN LI L + + L +M+ +SPD+
Sbjct: 480 KEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVS 539
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
+N ++ S C +++ A ML G+ P+ S+S LIKA K+ F + F +
Sbjct: 540 IYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIF-EI 598
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
N C +L L+ G +A ++ +T+ +R +F
Sbjct: 599 ALNVCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNF 643
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 171/363 (47%), Gaps = 6/363 (1%)
Query: 137 LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLV 196
L RF E P + N LL + + + + M G PE+ TF+ + L
Sbjct: 10 LRFRFPENPP--SIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLC 67
Query: 197 TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVN 256
L++ + D ++G +P ++ +L+ +AG +G L + + N
Sbjct: 68 DSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKV 127
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT----REL 312
YN +I FCK D A ++ EMR ++P++VTFN IS C +V + R++
Sbjct: 128 VYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDM 187
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+ + +P+ T+N M+ C+ E+A +M N +YNI + L
Sbjct: 188 QIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVR 247
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
IG + + + ++M + P++Y++N ++ C+ + A M + G+ PD +
Sbjct: 248 IGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVT 307
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y+ L+ +G+ EA M ++GC+P++YT N++L +L ++GR EA ++++
Sbjct: 308 YTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMN 367
Query: 493 ERG 495
E+G
Sbjct: 368 EKG 370
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%)
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
PP+ YN+L+RS G V L + M A +SP+ YTFN LI C ++ A +
Sbjct: 18 PPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARE 77
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
F M G P+ +S+ L++ ++G + + M + G +P+ N ++ +
Sbjct: 78 LFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFC 137
Query: 477 QQGRFEEAHDIVKTSKERGIS 497
++G+ ++A +V ++ G+S
Sbjct: 138 KEGKTDDAEKLVDEMRKDGLS 158
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/489 (25%), Positives = 226/489 (46%), Gaps = 15/489 (3%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP ++ ++++ LV+ D ++ +Q M PD Y +L + G+ + +
Sbjct: 161 SPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEK 220
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L+ +M LG PNVY YTI I C ++ E ++ E+MK+ V PN T +++ G
Sbjct: 221 LLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYC 280
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + +A+ L + E L +V TL+ A ++ M G P
Sbjct: 281 KTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNL- 339
Query: 187 TFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
Y CL+ G ++ E G+L + P TY +L+ L + E +R
Sbjct: 340 ---YVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRL 396
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ +R+ + +YN +I +CK M++A ++C EM + PN++TF+TLI G+C
Sbjct: 397 FQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCN 456
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ L + G PD T+ ++ID + ++AL S+M+E G+ PN T
Sbjct: 457 VRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHT 516
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+ L+ G ++ ++ +Q+ R + F LI+ C+ I +A + F M
Sbjct: 517 FACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMR 576
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ G+ PD SY +++K ++ R + M + G P NL++ L+ RF
Sbjct: 577 SCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILP-----NLLVNQLL--ARFY 629
Query: 483 EAHDIVKTS 491
+A+ VK++
Sbjct: 630 QANGYVKSA 638
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 164/354 (46%), Gaps = 35/354 (9%)
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
M RG +P+ + C ++ +LD G+KP Y + + L + +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
E ++ + K ++ N+ +Y+ +ID +CK + +A + +E+ ++ PN+V F T
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
L+ G CK E+ R L V +++ G P+ + +N +I C++ +A+ LSEM
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI------------------------ 391
+ P+ TY ILI LC VA + RLFQKM+ +RI
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 392 -----------SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
P+I TF+ LI +C + I+ A +F M G+ PD +Y+ALI A
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
K EA + + M + G +P+ +T +++ ++GR A D + + ++
Sbjct: 490 FKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQ 543
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 184/427 (43%), Gaps = 37/427 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGI P+ +Y I L + N ++ A F+ M P+ +TY+ +I G C+ G V +
Sbjct: 228 LGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQ 287
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L K++ PNV + L+DGFC A+ + + M + V PN L+H
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYL 182
G + + +A LL ME L+ + T+L L +EA + +KM +
Sbjct: 348 GHCKSGNMLEAVGLLSE-MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIF 406
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P S+T++ + ++ + + GV+P
Sbjct: 407 PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP------------------------ 442
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
N+ +++ +ID +C V + A + EM + I P++VT+ LI H K
Sbjct: 443 -----------NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFK 491
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+A + + L +LE G P+ TF ++D + R A+D E + N +
Sbjct: 492 EANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVG 551
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+ LI LC G + R+ R F M++ I+PDI ++ ++++ + +I M+
Sbjct: 552 FTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMI 611
Query: 423 TLGLRPD 429
G+ P+
Sbjct: 612 KTGILPN 618
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 192/451 (42%), Gaps = 3/451 (0%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
+++LI +G+ +EAL + ++M+ +P+ +++G +R V+ ++M
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREMKC---SPDSKACLSILNGLVRRRRFDSVWVDYQLM 190
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
R + P+ L F+ K +LL + + L ++
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
EA + M G LP T+ + ++ + G+ + + P + L
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ KA V H+ K + N+ YN +I CK M A + EM ++
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
+P++ T+ LI+G C + +V + L + P T+NS+I C+ + E ALD
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
SEM GV PN IT++ LI C + D+ ++ L+ +M I PD+ T+ ALI +
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHF 490
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ +++A + + ML G+ P++ +++ L+ K GR A + Q +
Sbjct: 491 KEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHV 550
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
++E L Q G A + GI+
Sbjct: 551 GFTCLIEGLCQNGYILRASRFFSDMRSCGIT 581
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 210/432 (48%), Gaps = 1/432 (0%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F M+ P ++ L+ I ++ + + L + +E LG + ++Y++T LID FC
Sbjct: 67 FCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCR 126
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
R++ L M + P+ T SLV+G ++A L+ + + ++
Sbjct: 127 CARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVI 186
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
NT++ L + A +L+ M G P+ T++ +T L + IL +
Sbjct: 187 YNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM 246
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+ G+ P T+ L++ K G+ +E + N + + + N+ +YN +I+ C ++D
Sbjct: 247 RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLD 306
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A ++ + + PN VT+NTLI+G+CK V ++L ++ G D FT+N++
Sbjct: 307 EAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLY 366
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
C+A +F A L MV GV P+ T+NIL+ LC G + ++L + +Q +
Sbjct: 367 QGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTV 426
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
I T+N +I+ C+ +K+E A F S+ G+ PD +Y ++ L + + EA +
Sbjct: 427 VGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHEL 486
Query: 453 FLSME-QNGCNP 463
+ M+ ++G P
Sbjct: 487 YRKMQKEDGLMP 498
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 176/421 (41%), Gaps = 35/421 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ LGIS + +ID + + LA +M +P T+ L++G C +
Sbjct: 105 LEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNR 164
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
EA+ LV Q+ GLGY PNV Y +ID C +V VL+ MK+ + P+ T
Sbjct: 165 FYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTY-- 222
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
N+L+ RL ++ +A IL M G
Sbjct: 223 ---------------------------------NSLITRLFHSGTWGVSARILSDMMRMG 249
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ TF + L E + I+R V P TY L+ L G E
Sbjct: 250 ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAK 309
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ LN + N +YN +I+ +CK +D +I M + + T+NTL G+
Sbjct: 310 KVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGY 369
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ + ++L ++ CG PD +TFN ++D LC + AL L ++ +
Sbjct: 370 CQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGI 429
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITYNI+I+ LC V + LF + +SPD+ T+ ++ R +A + +
Sbjct: 430 ITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRK 489
Query: 421 M 421
M
Sbjct: 490 M 490
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 165/367 (44%), Gaps = 4/367 (1%)
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A L E PL + + LL ++ + ++ R + G + +F +
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
C L+ L +K G +P T+ L+ R E ++ +
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV YN +ID C+ ++ A ++ + M+ I P++VT+N+LI+ + +L
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++ G PD TF+++ID + + +A +EM++ V PN +TYN LI LC
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G + + ++ + + P+ T+N LI +C+ +++ K M G+ D F+Y
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA----HDIVK 489
+ L + ++G+F A++ M G +PD YT N++L+ L G+ +A D+ K
Sbjct: 363 NTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQK 422
Query: 490 TSKERGI 496
+ GI
Sbjct: 423 SKTVVGI 429
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 124/245 (50%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
S+ +IDCFC+ + A +M P++VTF +L++G C ++ L+ +
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
+ G++P+ +N++ID LC + ALD L M + G+ P+ +TYN LI L G
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
S R+ M ISPD+ TF+ALI + + ++ +A+K + M+ + P+ +Y++L
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
I L G DEAK+ + G P++ T N ++ + R ++ I+ G+
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 497 SFKSF 501
+F
Sbjct: 356 DGDTF 360
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 181/393 (46%), Gaps = 2/393 (0%)
Query: 106 MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNS 164
M E + P+ L+ + + L+ ++A L R +E ++ L TL+ +
Sbjct: 70 MAESHPLPSIVDFSRLLIAIAK-LNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCA 128
Query: 165 MASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYL 224
S A + L KM G+ P TF V E ++D + G +P Y
Sbjct: 129 RLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYN 188
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
++++L + G+ L H+ K + +V +YN +I + I +M
Sbjct: 189 TIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRM 248
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
I+P+++TF+ LI + K+ ++ + ++ +++ P+ T+NS+I+ LC ++A
Sbjct: 249 GISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEA 308
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
L+ +V G PN +TYN LI C V +++ M D + D +T+N L Q
Sbjct: 309 KKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQG 368
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+C+ K AEK M++ G+ PD ++++ L+ L G+ +A ++++
Sbjct: 369 YCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVG 428
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T N+I++ L + + E+A + + +G+S
Sbjct: 429 IITYNIIIKGLCKADKVEDAWYLFCSLALKGVS 461
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 119/286 (41%), Gaps = 50/286 (17%)
Query: 247 FKDRLVSNVNS--YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+++RL S ++S +N + FC +M + P++V F+ L+ K
Sbjct: 47 YRERLRSGLHSIKFNDALTLFC-------------DMAESHPLPSIVDFSRLLIAIAKLN 93
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM------------- 351
+ L L G D ++F ++IDC CR R AL CL +M
Sbjct: 94 KYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFG 153
Query: 352 ----------------------VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
V G PN + YN +I SLC G V +L + + M+
Sbjct: 154 SLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKM 213
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
I PD+ T+N+LI + + M+ +G+ PD ++SALI K G+ EA
Sbjct: 214 GIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA 273
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
K+ + M Q NP+ T N ++ L G +EA ++ +G
Sbjct: 274 KKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKG 319
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+F DAL +M E P+ + ++ L+ ++ + + LF+ ++ IS D+Y+F
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI FCR ++ A M+ LG P ++ +L+ RF EA +
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G P+ N I+++L ++G+ A D++K K+ GI
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGI 215
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ T YN + ++ A +M PD +T+NIL+ G+C G + +A
Sbjct: 354 GVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKA 413
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++ ++ + TY I+I G C A +V + + + + + V P+ T +++ G
Sbjct: 414 LVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIG 473
Query: 125 VFRCLDPHKAFELLIRFMERE 145
+ R +A EL R M++E
Sbjct: 474 LRRKRLWREAHELY-RKMQKE 493
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P +N ++D L I A ++ + + + TYNI+I G+C+ V++A
Sbjct: 389 GVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDA 448
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM-KERNVCP 113
L + G +P+V TY ++ G + E + M KE + P
Sbjct: 449 WYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 207/433 (47%), Gaps = 2/433 (0%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F+ M D + + + + R G VD LR ++M L VY+ TI++DG C
Sbjct: 178 FEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCK 237
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
V ++++ + + V N T + + G F+ LD E+L ME+E + +V
Sbjct: 238 RGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILT-LMEKEGVACNVV 296
Query: 153 CNTLL-YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
TLL + SN EA + +M ++G + + ++C ++ + D
Sbjct: 297 TYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEM 356
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+G+ P TY L+ + KAG+ +N + + N +N +ID +C+ M+
Sbjct: 357 TDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMV 416
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
D A + M + + ++ +N++ SG CK + + LL ++E G P+ +F ++
Sbjct: 417 DEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTL 476
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
ID C+ F +A EM E G PN ITYN+LI G++ + +L +++ +
Sbjct: 477 IDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGL 536
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
PD+YT +LI C K++ A K F M GL P+ +Y+A+I L K GR +EA +
Sbjct: 537 IPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFK 596
Query: 452 TFLSMEQNGCNPD 464
+ M++ G PD
Sbjct: 597 LYDEMKETGLTPD 609
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 162/312 (51%), Gaps = 6/312 (1%)
Query: 190 YTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG-DRYLN 244
Y++T ++ GL D+ ++D +GVK TY +E +K D+ G L
Sbjct: 226 YSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKR-LDLGGVAEILT 284
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K+ + NV +Y ++I F + ++ A + EMR++ I ++ + ++IS +C+
Sbjct: 285 LMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSG 344
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V + L + + G P T+ ++I +C+A + E A ++EM G+ N + +N
Sbjct: 345 NVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFN 404
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C G V +LRL M+ + D++ +N++ C++N+ ++A+ FSM+
Sbjct: 405 TLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVER 464
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ P+ S++ LI K G F EAK+ F ME+ G P+ T N++++ ++G +EA
Sbjct: 465 GVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEA 524
Query: 485 HDIVKTSKERGI 496
H + + RG+
Sbjct: 525 HKLKDELENRGL 536
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 160/361 (44%), Gaps = 35/361 (9%)
Query: 172 ILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY 231
++ ++ +G T++ + LDL IL K GV TY LL+
Sbjct: 247 LMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFS 306
Query: 232 KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
G+ E R + + + ++V Y +I C C+ + RA + EM D+ + P+
Sbjct: 307 NIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAH 366
Query: 292 TFNTLISGHCKDAEVHKTRELL-----------------------------------VML 316
T+ LI G CK ++ + L+ V++
Sbjct: 367 TYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVM 426
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
+ G + D F +NS+ LC+ +R ++A L MVE GV PNT+++ LI C G+
Sbjct: 427 EKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNF 486
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+ R+F++M+ P+I T+N LI + + +++A K + GL PD ++ ++L
Sbjct: 487 VEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSL 546
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
I G+ D A + F M Q G P+ T ++ L + GR EEA + KE G+
Sbjct: 547 IHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGL 606
Query: 497 S 497
+
Sbjct: 607 T 607
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 182/398 (45%), Gaps = 51/398 (12%)
Query: 16 VIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICR---IGVVDEALRLVKQME 72
V+D L K +++ +++ K + TYN I G + +G V E L L ME
Sbjct: 231 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTL---ME 287
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNV--------------------- 111
G A NV TYT+LI GF N ++ E R+ E M+E+ +
Sbjct: 288 KEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVK 347
Query: 112 --------------CPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT-QKLVCNTL 156
P+ T +L+HGV + +A ++L+ M+ + + ++ NTL
Sbjct: 348 RALVLFDEMTDKGLIPSAHTYGALIHGVCKA-GQMEAAQMLVNEMQGKGIDLNPVIFNTL 406
Query: 157 LYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL-DLN---ETCGILDTFI 212
+ + M EA + M +G ES F Y + +GL LN E G+L + +
Sbjct: 407 IDGYCESGMVDEALRLQVVMEKKGL--ESDVFAY--NSIASGLCKLNRKDEAKGLLFSMV 462
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+RGV P ++ L++ K G VE R + + V N+ +YN++ID + K M
Sbjct: 463 ERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMK 522
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A ++ E+ +R + P++ T +LI G C D +V +L + + G P+ T+ +MI
Sbjct: 523 EAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMI 582
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
L + R E+A EM E G+ P+ Y+ L+ SL
Sbjct: 583 SGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 146/334 (43%), Gaps = 35/334 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI +Y ++I +S ++ A + F +M+ P TY LIHG+C+ G ++ A
Sbjct: 325 GIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAA 384
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LV +M+G G N + LIDG+C + V E R+ +M+++ + + S+ G
Sbjct: 385 QMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASG 444
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A LL +ER + TL+ EA + R+M ++G +P
Sbjct: 445 LCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPN 504
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ ++D + KRG M+ +K ++E
Sbjct: 505 IITYNV----------------LIDGYSKRGN----------MKEAHKLKDELE------ 532
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
L+ +V + +I C +D A ++ EM R + PN+VT+ +ISG KD
Sbjct: 533 ---NRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDG 589
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
+ +L + E G PD ++S++ L A
Sbjct: 590 RSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 623
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 107/224 (47%)
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
R M + D+ + + ++ G CK +V R+L+ + G K + T+N+ I+ +
Sbjct: 214 RRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKR 273
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+ L+ M + GV N +TY +LI IG + + RLF++M+ I D+Y +
Sbjct: 274 LDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVY 333
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
++I CR +++A F M GL P +Y ALI + K+G+ + A+ M+
Sbjct: 334 TSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQG 393
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFP 502
G + + N +++ + G +EA + +++G+ F
Sbjct: 394 KGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFA 437
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 4/158 (2%)
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
F +AL+ M + G + + + + +L G V LR F++M + +Y+
Sbjct: 171 FGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 230
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
++ C+ +E K + G++ + +Y+A I+ K + ME+ G
Sbjct: 231 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 290
Query: 461 --CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
CN +YT L++ G+ EEA + + +E+GI
Sbjct: 291 VACNVVTYT--LLIHGFSNIGKIEEAQRLFEEMREKGI 326
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 41/90 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P ++I +D+A F +M P+ TY +I G+ + G +EA
Sbjct: 535 GLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEA 594
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAK 94
+L +M+ G P+ Y+ L+ +A+
Sbjct: 595 FKLYDEMKETGLTPDDTVYSSLVGSLHSAE 624
>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Brachypodium distachyon]
Length = 886
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 229/492 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P + ++ +LVK LA F M D + Y I C + +D A
Sbjct: 157 GIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGA 216
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LV +M+ G + Y +LI G C +RV E V M R V +E T R+LV+G
Sbjct: 217 KGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYG 276
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + A E+ + + C+ +L L EA + ++G+ +P
Sbjct: 277 FCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPN 336
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + + +E +++ +G++P TY +L+ +L K G + L+
Sbjct: 337 IFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLD 396
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + V YN +I+C CK + +D A EM + + PN +++ +I+G C+
Sbjct: 397 RMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKG 456
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ EL + E G + +TF ++I+ C+A + ++A ++M E + PN +T+N
Sbjct: 457 DLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFN 516
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I C +GD+ ++ +L+ +M ++PD YT+ +LI C + KA++ +
Sbjct: 517 AVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENN 576
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ FS +AL+ + GR EA + M G D + +I+ ++Q E++
Sbjct: 577 CSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKS 636
Query: 485 HDIVKTSKERGI 496
+ + KE+G+
Sbjct: 637 CVLFREMKEKGV 648
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/495 (25%), Positives = 217/495 (43%), Gaps = 5/495 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L + P+ YNA+++ + K+ A +MS +P+ TY ILIH +C+ G++D+
Sbjct: 331 LRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDD 390
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL ++ +M G VY Y LI+ C + L M E + PN A+ ++
Sbjct: 391 ALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIA 450
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R D A EL + E+ L+ EA+ + KM + P
Sbjct: 451 GLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEP 510
Query: 184 ESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
TF+ + CLV D+ + + D + RG+ P TY L+ L +
Sbjct: 511 NEVTFNAVIEGYCLVG--DIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKE 568
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
++ + + V N S ++ FC+ + A + EM +L++F ++
Sbjct: 569 FVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAAL 628
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + K+ L + E G +PD MI+ + AL+C EM+ G PNT+
Sbjct: 629 KQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTV 688
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY L+ +LC ++ + L ++M A P+ YTFN + F +E A+ +F+M
Sbjct: 689 TYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAM 748
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
L G + S + LIK K G+ EA +NG PD + + ++ L ++G
Sbjct: 749 LQ-GFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDI 807
Query: 482 EEAHDIVKTSKERGI 496
EA ++ +G+
Sbjct: 808 NEAIELWNEMLYKGV 822
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 214/468 (45%), Gaps = 11/468 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ + YN++I+ K + +D+A +M P+ +Y+ +I G+CR G + A
Sbjct: 402 GVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGA 461
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L ++M G A N YT+T LI+GFC AK++ E R+ M E N+ PNE T +++ G
Sbjct: 462 VELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEG 521
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
D KAF+L + M R +L+ L AS+A + + +
Sbjct: 522 YCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNC---- 577
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
S +++T L+ G L E + + G K ++ +++ A K D E
Sbjct: 578 SVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQ-HDSEKS 636
Query: 241 RYLNHVFKDRLVSNVNSYNM-VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L K++ V N ++ +I+ + K M +A EM PN VT+ L++
Sbjct: 637 CVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNN 696
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK + L +L F P+ +TFN +D E A D M++ G N
Sbjct: 697 LCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQ-GFLAN 755
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
++ N LI+ C +G + ++ L + + PD +++ +I C+ I +A + +
Sbjct: 756 IVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWN 815
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
ML G++PD +Y+ LI+ G D+ ++ M + G P+ +T
Sbjct: 816 EMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHT 863
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 203/434 (46%), Gaps = 3/434 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G++P+ Y+ VI L + + A ++M+ + +T+ LI+G C+ +DE
Sbjct: 436 IGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDE 495
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A RL +M PN T+ +I+G+C + + F++ + M R + P+ T RSL+
Sbjct: 496 ASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLIS 555
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ KA E + + K LL+ +EA + +M G
Sbjct: 556 GLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKL 615
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ +F V + D ++C + ++GV+P + ++ K G V+
Sbjct: 616 DLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCW 675
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + D + N +Y +++ CK + A +C+EM PN TFN + +
Sbjct: 676 DEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATE 735
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ ++L +L+ GF + + N++I C+ + ++A+D +S E G P+ I+Y
Sbjct: 736 GNLETAKDLYFAMLQ-GFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISY 794
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN-KIEKAEKAFFSML 422
+ +I LC GD+ ++ L+ +M + PDI +N LI+ +C ++ + +K + M+
Sbjct: 795 STVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIR-WCNIHGESDKCLGIYIDMV 853
Query: 423 TLGLRPDNFSYSAL 436
G++P+ ++ AL
Sbjct: 854 KKGVQPNWHTHRAL 867
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 109/262 (41%), Gaps = 39/262 (14%)
Query: 245 HVFKDRLVSNV----NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
H+F L S V Y I +C+V +D A + M+D + V +N LI G
Sbjct: 183 HLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGL 242
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ V + ++ +L G D+ T +++ CR + AL+ +M G P+
Sbjct: 243 CKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSE 302
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ ++ L G V + RL ++ R+ P+I
Sbjct: 303 ANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNI------------------------- 337
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
F+Y+AL+ + K+G F EA + M G P+ T +++ +L ++G
Sbjct: 338 ----------FAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGM 387
Query: 481 FEEAHDIVKTSKERGISFKSFP 502
++A ++ +E+G+ +P
Sbjct: 388 MDDALCMLDRMREKGVRMTVYP 409
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 221/469 (47%), Gaps = 43/469 (9%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
+PD F YN LI+G C++ +D+A R++ +M ++P+ TY I+I C+ ++ +
Sbjct: 151 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 210
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
VL+ + N P T L+ +A +LL + R NT++ +
Sbjct: 211 VLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMC 270
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
M A ++R L+L +G +P
Sbjct: 271 KEGMVDRAFEMIRN-----------------------LEL------------KGCEPDVI 295
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+Y +L+ AL G+ EG++ + +F ++ NV +Y+++I C+ ++ A + + M
Sbjct: 296 SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 355
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+++ + P+ +++ LI+ C++ + E L ++ G PD +N+++ LC+ +
Sbjct: 356 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 415
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+ AL+ ++ E G PN+ +YN + +L + GD R+L + +M ++ I PD T+N++
Sbjct: 416 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSM 475
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I CR ++KA + M + P +Y+ ++ K+ R ++A SM NGC
Sbjct: 476 ISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGC 535
Query: 462 NPDSYTSNLILETLVQQG----RFEEAHDIVKTSKERGISFK----SFP 502
P+ T +++E + G E A+D+V+ + SFK +FP
Sbjct: 536 RPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAISEYSFKRLHRTFP 584
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 192/413 (46%), Gaps = 3/413 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP T YN +I +L +DLA Q+ D C+P TY ILI G VDEAL+
Sbjct: 186 SPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALK 245
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L+ +M G P+++TY +I G C V F ++ ++ + P+ + L+ +
Sbjct: 246 LLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALL 305
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ +L+ + + + + L+ L + EA +L+ M ++G P++
Sbjct: 306 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 365
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
++D + L+ L+T I G P Y ++ L K G+ + +
Sbjct: 366 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 425
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ N +SYN + RA + EM I P+ +T+N++IS C++ V
Sbjct: 426 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMV 485
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
K ELLV + C F P T+N ++ C+AHR EDA+D L MV G PN TY +L
Sbjct: 486 DKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVL 545
Query: 367 IRSLCAIGDVARSLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
I + G A ++ L + + + IS Y+F L ++F +N ++++ + F
Sbjct: 546 IEGIGFAGYRAEAMELANDLVRINAISE--YSFKRLHRTFPLLNVLQRSSQTF 596
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 206/438 (47%), Gaps = 36/438 (8%)
Query: 51 LIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
+ H CR G E+L L++ M GY P+V T LI GF + V + RV+EI+ E+
Sbjct: 91 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEIL-EKF 149
Query: 111 VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA 170
P+ +L++G + M R +A
Sbjct: 150 GQPDVFAYNALINGFCK--------------MNR---------------------IDDAT 174
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
+L +M + + P++ T++ + L + L+ +LD + +P TY +L+EA
Sbjct: 175 RVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEAT 234
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
G E + L+ + L ++ +YN +I CK M+DRA E+ R + + P++
Sbjct: 235 MLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDV 294
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
+++N L+ + + +L+ + P+ T++ +I LCR + E+A++ L
Sbjct: 295 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 354
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M E G+ P+ +Y+ LI + C G + ++ + M +D PDI +N ++ + C+ K
Sbjct: 355 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 414
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
++A + F + +G P++ SY+ + AL SG A L M NG +PD T N
Sbjct: 415 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNS 474
Query: 471 ILETLVQQGRFEEAHDIV 488
++ L ++G ++A +++
Sbjct: 475 MISCLCREGMVDKAFELL 492
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 159/348 (45%), Gaps = 35/348 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN +I + K +D A+ + + + C+PD +YNIL+ + G +E
Sbjct: 254 GLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEG 313
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L+ +M PNV TY+ILI C ++ E +L++MKE+ + P+ + L+
Sbjct: 314 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 373
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R A E L + L + NT+L L N A +A I K+G+ G P
Sbjct: 374 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 433
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
SS+++ + L + D ++ + G+ P
Sbjct: 434 SSSYNTMFSALWSSGDKIRALHMILEMVSNGIDP-------------------------- 467
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
D + +YN +I C C+ M+D+A E+ +MR + P++VT+N ++ G CK
Sbjct: 468 ----DEI-----TYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 518
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+ ++L ++ G +P++ T+ +I+ + A +A++ +++V
Sbjct: 519 RIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 566
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 63/122 (51%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G SP++ YN + AL S A +M + PD TYN +I +CR G+VD+
Sbjct: 428 VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDK 487
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+ M + P+V TY I++ GFC A R+ + VL+ M PNE T L+
Sbjct: 488 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIE 547
Query: 124 GV 125
G+
Sbjct: 548 GI 549
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/497 (25%), Positives = 229/497 (46%), Gaps = 14/497 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P + +ID L ++ +D A F++M P+ +TY ++I+G+ + G V EA R+
Sbjct: 190 PCAATWTILIDGLFRAIRVDEACYYFEEMK-HTAIPNNWTYTVVINGLVKAGKVAEAERV 248
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+++M P + YT +I G C A + + + +LE MK + + T +L+HG R
Sbjct: 249 LQEMP----VPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCR 304
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDRGYLPESS 186
+ +A+ELL + + + L+ L SEA +L + + P
Sbjct: 305 LQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVV 364
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+++ + +N+ + + G P TY L+ L AGR E YL +
Sbjct: 365 SYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEM 424
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+++ V Y+ VI C+ +D A+ + M PNL +N+LI G CK +
Sbjct: 425 VGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRL 484
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ + + E G PD T+ ++I LCR R ++A D +E G+ + + N++
Sbjct: 485 CDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVV 544
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I SL + R LR+ + A SP + + +I+S C+ N + +A + M+ G+
Sbjct: 545 IASLRCLEQAQRVLRV---VLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGI 601
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+PD + AL+ A+ + + A M + G P T + +L L + G+ EAH
Sbjct: 602 KPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHV 661
Query: 487 IVKTSKERGISFKS-FP 502
+++ R IS S FP
Sbjct: 662 VLR----RLISHTSCFP 674
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 216/488 (44%), Gaps = 79/488 (16%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
TYN + R G +EA RL K+ P+ TY ILI G CN ++ + E M
Sbjct: 92 TYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEM 151
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
+R + P T + L++ + + + EL +R+ E+ M+
Sbjct: 152 VDRGLRPVVLTCKFLLNALCKSGN----LELALRYFEK--------------------MS 187
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
S +P ++T+ + L + ++E C + +K P TY ++
Sbjct: 188 S--------------IPCAATWTILIDGLFRAIRVDEACYYFEE-MKHTAIPNNWTYTVV 232
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ L KAG+ E +R V ++ V + +Y VI CK M +A + +M+ +
Sbjct: 233 INGLVKAGKVAEAER----VLQEMPVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGY 288
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
+ +T+NTLI GHC+ E+ + ELL + F PD FT++ +I LCRA R +A D
Sbjct: 289 QGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARD 348
Query: 347 CLS------------------------------------EMVEWGVPPNTITYNILIRSL 370
L EMV G P+ +TY+ LIR L
Sbjct: 349 LLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGL 408
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C G + + ++M +I P + ++++I CR +++ A F SM+ G +P+
Sbjct: 409 CNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNL 468
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
Y++LI L K+GR +AK M + GC+PD T ++ L + R +EA D+
Sbjct: 469 AVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVR 528
Query: 491 SKERGISF 498
S E+GI
Sbjct: 529 SLEQGIEI 536
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 221/493 (44%), Gaps = 18/493 (3%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN +AL+++ + AY F++ + PD TY ILI G+C G + A L ++M
Sbjct: 93 YNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMV 152
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G P V T L++ C + + R E M P AT L+ G+FR +
Sbjct: 153 DRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSS---IPCAATWTILIDGLFRAIRVD 209
Query: 133 KA---FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
+A FE + T +V N L+ +EA +L++M +P + +
Sbjct: 210 EACYYFEEMKHTAIPNNWTYTVVINGLV----KAGKVAEAERVLQEMP----VPTLANYT 261
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
+ D+ + +L+ ++G + TY L+ + L + +
Sbjct: 262 SVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSN 321
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD-IAPNLVTFNTLISGHCKDAEVHK 308
V ++ +Y+++I C+ + A ++ +R+ D PN+V++NTLI G K A V+
Sbjct: 322 DFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVND 381
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+L + ++ G PD T++++I LC A R +A L EMV + P Y+ +I
Sbjct: 382 AYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVIS 441
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
LC G++ + +F M A+ P++ +N+LI C+ ++ A+ M G P
Sbjct: 442 GLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSP 501
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
D +Y LI L + R DEA ++ + G + N+++ +L E+A ++
Sbjct: 502 DGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRC---LEQAQRVL 558
Query: 489 KTSKERGISFKSF 501
+ G S +F
Sbjct: 559 RVVLATGNSPTAF 571
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 164/395 (41%), Gaps = 43/395 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y+ +I L + A+ ++M + P Y+ +I G+CR G +D A
Sbjct: 393 GQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAA 452
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M G PN+ Y LI G C R+ + ++ M ER P+ T +L+ G
Sbjct: 453 STVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVG 512
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL----------------SNNSMA-- 166
+ R +A +L +R +E+ + CN ++ L N+ A
Sbjct: 513 LCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFF 572
Query: 167 --------------SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
+EA +L M G P+ ST D V + L+ +
Sbjct: 573 YATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMV 632
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVN------SYNMVIDCFC 266
+ G KP TY L+ AL+KAG+ E HV RL+S+ + Y +I +
Sbjct: 633 RLGSKPSVGTYSTLLNALFKAGKPSEA-----HVVLRRLISHTSCFPDELWYVGLIAAYS 687
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
+ ++ A + +E++ + ++V +NTL+ G + + ELL + F ++
Sbjct: 688 NQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEA 747
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
TFN +I CR + + A+ LSEM + P I
Sbjct: 748 TFNILIQGFCRLGQTDRAVRVLSEMKKVLTPSAAI 782
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 4/169 (2%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
F+ T+N + L R + E+A E + P++ITY ILIR LC G + +
Sbjct: 86 FRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLAC 145
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
L+++M + P + T L+ + C+ +E A + F M ++ P +++ LI L
Sbjct: 146 SLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSI---PCAATWTILIDGL 202
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
++ R DEA F M+ P+++T +++ LV+ G+ EA +++
Sbjct: 203 FRAIRVDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAERVLQ 250
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 207/433 (47%), Gaps = 2/433 (0%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F+ M D + + + + R G VD LR ++M L VY+ TI++DG C
Sbjct: 182 FEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCK 241
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
V ++++ + + V N T + + G F+ LD E+L ME+E + +V
Sbjct: 242 RGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILT-LMEKEGVACNVV 300
Query: 153 CNTLL-YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
TLL + SN EA + +M ++G + + ++C ++ + D
Sbjct: 301 TYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEM 360
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+G+ P TY L+ + KAG+ +N + + N +N +ID +C+ M+
Sbjct: 361 TDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMV 420
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
D A + M + + ++ +N++ SG CK + + LL ++E G P+ +F ++
Sbjct: 421 DEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTL 480
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
ID C+ F +A EM E G PN ITYN+LI G++ + +L +++ +
Sbjct: 481 IDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGL 540
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
PD+YT +LI C K++ A K F M GL P+ +Y+A+I L K GR +EA +
Sbjct: 541 IPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFK 600
Query: 452 TFLSMEQNGCNPD 464
+ M++ G PD
Sbjct: 601 LYDEMKETGLTPD 613
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 162/312 (51%), Gaps = 6/312 (1%)
Query: 190 YTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG-DRYLN 244
Y++T ++ GL D+ ++D +GVK TY +E +K D+ G L
Sbjct: 230 YSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKR-LDLGGVAEILT 288
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K+ + NV +Y ++I F + ++ A + EMR++ I ++ + ++IS +C+
Sbjct: 289 LMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSG 348
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V + L + + G P T+ ++I +C+A + E A ++EM G+ N + +N
Sbjct: 349 NVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFN 408
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C G V +LRL M+ + D++ +N++ C++N+ ++A+ FSM+
Sbjct: 409 TLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVER 468
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ P+ S++ LI K G F EAK+ F ME+ G P+ T N++++ ++G +EA
Sbjct: 469 GVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEA 528
Query: 485 HDIVKTSKERGI 496
H + + RG+
Sbjct: 529 HKLKDELENRGL 540
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 160/361 (44%), Gaps = 35/361 (9%)
Query: 172 ILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY 231
++ ++ +G T++ + LDL IL K GV TY LL+
Sbjct: 251 LMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFS 310
Query: 232 KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
G+ E R + + + ++V Y +I C C+ + RA + EM D+ + P+
Sbjct: 311 NIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAH 370
Query: 292 TFNTLISGHCKDAEVHKTRELL-----------------------------------VML 316
T+ LI G CK ++ + L+ V++
Sbjct: 371 TYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVM 430
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
+ G + D F +NS+ LC+ +R ++A L MVE GV PNT+++ LI C G+
Sbjct: 431 EKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNF 490
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+ R+F++M+ P+I T+N LI + + +++A K + GL PD ++ ++L
Sbjct: 491 VEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSL 550
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
I G+ D A + F M Q G P+ T ++ L + GR EEA + KE G+
Sbjct: 551 IHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGL 610
Query: 497 S 497
+
Sbjct: 611 T 611
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 182/398 (45%), Gaps = 51/398 (12%)
Query: 16 VIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICR---IGVVDEALRLVKQME 72
V+D L K +++ +++ K + TYN I G + +G V E L L ME
Sbjct: 235 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTL---ME 291
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNV--------------------- 111
G A NV TYT+LI GF N ++ E R+ E M+E+ +
Sbjct: 292 KEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVK 351
Query: 112 --------------CPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT-QKLVCNTL 156
P+ T +L+HGV + +A ++L+ M+ + + ++ NTL
Sbjct: 352 RALVLFDEMTDKGLIPSAHTYGALIHGVCKA-GQMEAAQMLVNEMQGKGIDLNPVIFNTL 410
Query: 157 LYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL-DLN---ETCGILDTFI 212
+ + M EA + M +G ES F Y + +GL LN E G+L + +
Sbjct: 411 IDGYCESGMVDEALRLQVVMEKKGL--ESDVFAY--NSIASGLCKLNRKDEAKGLLFSMV 466
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+RGV P ++ L++ K G VE R + + V N+ +YN++ID + K M
Sbjct: 467 ERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMK 526
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A ++ E+ +R + P++ T +LI G C D +V +L + + G P+ T+ +MI
Sbjct: 527 EAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMI 586
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
L + R E+A EM E G+ P+ Y+ L+ SL
Sbjct: 587 SGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 146/334 (43%), Gaps = 35/334 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI +Y ++I +S ++ A + F +M+ P TY LIHG+C+ G ++ A
Sbjct: 329 GIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAA 388
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LV +M+G G N + LIDG+C + V E R+ +M+++ + + S+ G
Sbjct: 389 QMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASG 448
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A LL +ER + TL+ EA + R+M ++G +P
Sbjct: 449 LCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPN 508
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ ++D + KRG M+ +K ++E
Sbjct: 509 IITYNV----------------LIDGYSKRGN----------MKEAHKLKDELE------ 536
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
L+ +V + +I C +D A ++ EM R + PN+VT+ +ISG KD
Sbjct: 537 ---NRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDG 593
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
+ +L + E G PD ++S++ L A
Sbjct: 594 RSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 627
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 107/224 (47%)
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
R M + D+ + + ++ G CK +V R+L+ + G K + T+N+ I+ +
Sbjct: 218 RRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKR 277
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+ L+ M + GV N +TY +LI IG + + RLF++M+ I D+Y +
Sbjct: 278 LDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVY 337
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
++I CR +++A F M GL P +Y ALI + K+G+ + A+ M+
Sbjct: 338 TSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQG 397
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFP 502
G + + N +++ + G +EA + +++G+ F
Sbjct: 398 KGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFA 441
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 4/158 (2%)
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
F +AL+ M + G + + + + +L G V LR F++M + +Y+
Sbjct: 175 FGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 234
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
++ C+ +E K + G++ + +Y+A I+ K + ME+ G
Sbjct: 235 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 294
Query: 461 --CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
CN +YT L++ G+ EEA + + +E+GI
Sbjct: 295 VACNVVTYT--LLIHGFSNIGKIEEAQRLFEEMREKGI 330
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 206/440 (46%), Gaps = 38/440 (8%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PST NA++ LV + +DLA F+ + PD +T+N +I G+CRIG + +A +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV---LEIMKERNVCPNEATVRSLVHG 124
K ++ G AP+V TY LIDG+C ++ V L+ M E + P T L++G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A + ++ + N+L+ L + E ++ +M D G P
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF C++ G F K+G+ + ++ M R+VE D
Sbjct: 334 EITFG----CVLKG------------FCKKGMMADANDWIDGMTE-----RNVEPD---- 368
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
V YN++ID + ++ M+ A + M + I+PN+ T+N LI+G +
Sbjct: 369 ----------VVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ LL + E G + D T+N +I LC A+ L EM E G+ PN +TYN
Sbjct: 419 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYN 478
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I+ C G++ + + +M+ R ++ T+N I+ FC++ K+++A ML
Sbjct: 479 TIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDK 538
Query: 425 GLRPDNFSYSALIKALIKSG 444
L P+ +Y + + +++ G
Sbjct: 539 CLVPNGITYETIKEGMMEKG 558
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 187/438 (42%), Gaps = 32/438 (7%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
+P + N L+ G+ VD A + + +P++YT+ +I G C ++ +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
V + +K + P+ AT SL+ G + + + +
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM---------------------- 250
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
+L++M + G P + TF + + + + ++G+
Sbjct: 251 ----------LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVV 300
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
TY L+ L G+ EG + + + L N ++ V+ FCK MM A + M
Sbjct: 301 TYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGM 360
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+R++ P++V +N LI + + ++ + + + G P+ T+N +I R+ +
Sbjct: 361 TERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDW 420
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
A L EM E G+ + +TYN+LI +LC G+V ++++L +M + P+ T+N +
Sbjct: 421 RSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
IQ FC I+ A + M R + +Y+ IK + G+ DEA M
Sbjct: 481 IQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCL 540
Query: 462 NPDSYTSNLILETLVQQG 479
P+ T I E ++++G
Sbjct: 541 VPNGITYETIKEGMMEKG 558
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 170/382 (44%), Gaps = 9/382 (2%)
Query: 113 PNEATVRSLVHGVF---RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEA 169
P+ ++V +L+ G+ R KAF +R R NT++ L +A
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALR---RRVSPDIYTFNTVISGLCRIGQLRKA 210
Query: 170 AAILRKMGDRGYLPESSTFDYTVT--CLVTGL-DLNETCGILDTFIKRGVKPRFSTYLLL 226
+ + + G P +T++ + C G ++ +L ++ G+ P T+ +L
Sbjct: 211 GDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVL 270
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ K R + + + ++V +YN +I C ++ ++ EM D +
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
+PN +TF ++ G CK + + + + E +PD +N +ID R + EDA+
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMA 390
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
M + G+ PN TYN LI GD + L +M+ I D+ T+N LI + C
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALC 450
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
++ KA K M +GL P++ +Y+ +I+ G A + ME+ +
Sbjct: 451 CKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVV 510
Query: 467 TSNLILETLVQQGRFEEAHDIV 488
T N+ ++ Q G+ +EA+D++
Sbjct: 511 TYNVFIKYFCQIGKMDEANDLL 532
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 165/373 (44%), Gaps = 46/373 (12%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAY---LKFQQMSVDQCKPDRFTYNILIHGICR 57
I G++PS YN++ID K Y + ++M P T+ +LI+G C+
Sbjct: 217 IKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCK 276
Query: 58 IGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
A+R+ ++M+ G A +V TY LI G C+ +V E +++E M++ + PNE T
Sbjct: 277 NSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEIT 336
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
++ G + A + + ER ++ N L+ +A A+ M
Sbjct: 337 FGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMA 396
Query: 178 DRGYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
+G P +T++ CL+TG D G+LD ++G++
Sbjct: 397 KKGISPNVTTYN----CLITGFSRSGDWRSASGLLDEMKEKGIE---------------- 436
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
++V +YN++I C + +A ++ EM + + PN +T+
Sbjct: 437 -------------------ADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTY 477
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
NT+I G C + E+ + +C + + T+N I C+ + ++A D L+EM++
Sbjct: 478 NTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD 537
Query: 354 WGVPPNTITYNIL 366
+ PN ITY +
Sbjct: 538 KCLVPNGITYETI 550
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 123/247 (49%), Gaps = 3/247 (1%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+ +S N ++ +D A + R R ++P++ TFNT+ISG C+ ++ K ++
Sbjct: 155 STSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVA 214
Query: 314 VMLLECGFKPDKFTFNSMIDCLCR---AHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+ G P T+NS+ID C+ A L EMVE G+ P +T+ +LI
Sbjct: 215 KDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGY 274
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C + A ++R+F++M+ I+ + T+N+LI C K+E+ K M LGL P+
Sbjct: 275 CKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNE 334
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
++ ++K K G +A M + PD N++++ + G+ E+A + +
Sbjct: 335 ITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEA 394
Query: 491 SKERGIS 497
++GIS
Sbjct: 395 MAKKGIS 401
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 148/319 (46%), Gaps = 7/319 (2%)
Query: 183 PESSTFDYTVTCLVTG--LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P +S+ + + LV +DL E + ++R V P T+ ++ L + G+ +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKA--FRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCK---VNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ L +V +YN +ID +CK M + +EM + I+P VTF LI
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
+G+CK++ + + + G T+NS+I LC + E+ + + EM + G+
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
PN IT+ +++ C G +A + M + PD+ +N LI + R+ K+E A
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAV 391
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
+M G+ P+ +Y+ LI +SG + A M++ G D T N+++ L
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451
Query: 478 QGRFEEAHDIVKTSKERGI 496
+G +A ++ E G+
Sbjct: 452 KGEVRKAVKLLDEMSEVGL 470
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 155/321 (48%), Gaps = 18/321 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP+ + +I+ K+++ A F++M TYN LI G+C G V+E
Sbjct: 259 GISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEG 318
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+++ME LG +PN T+ ++ GFC +A+ ++ M ERNV P + + +++
Sbjct: 319 VKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEP-DVVIYNILID 377
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
V+R L + + M ++ ++ + N L+ S + A+ +L +M ++G
Sbjct: 378 VYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEA 437
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + L ++ + +LD + G++P TY +++ G
Sbjct: 438 DVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIR 497
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ K R +NV +YN+ I FC++ MD A ++ EM D+ + PN +T+ T+ G
Sbjct: 498 TRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG---- 553
Query: 304 AEVHKTRELLVMLLECGFKPD 324
++E G+ PD
Sbjct: 554 ------------MMEKGYTPD 562
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 96/231 (41%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+SP+ + V+ K + A M+ +PD YNILI R+G +++
Sbjct: 328 LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMED 387
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ + + M G +PNV TY LI GF + +L+ MKE+ + + T L+
Sbjct: 388 AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIG 447
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + KA +LL E L NT++ + A I +M
Sbjct: 448 ALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRA 507
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
T++ + ++E +L+ + + + P TY + E + + G
Sbjct: 508 NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
RP S +AL+ L+ + R D A++ F S + +PD YT N ++ L + G+ +A D
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 487 IVKTSKERGIS 497
+ K K G++
Sbjct: 213 VAKDIKAWGLA 223
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S +G+ P+ YN +I +I AY +M + + + TYN+ I C+IG
Sbjct: 465 MSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGK 524
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGF 90
+DEA L+ +M PN TY + +G
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEGM 554
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 216/490 (44%), Gaps = 10/490 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S YNA++D KS+ A +M ++ P TYN LI R G++DEA
Sbjct: 309 GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEA 368
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV-- 122
+ L QM G P+V+TYT L+ GF A +V + E M+ PN T + +
Sbjct: 369 MELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKM 428
Query: 123 HGVFRCLDPHKAFELLIRFMERE--PLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDR 179
+G + K E++ F E L+ +V NTLL N M SE + + ++M
Sbjct: 429 YG-----NRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA 483
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G++PE TF+ ++ + + + GV P STY ++ AL + G +
Sbjct: 484 GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS 543
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
++ L + R N +Y ++ + + + E+ I P V TL+
Sbjct: 544 EKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLV 603
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
K + + L E GF PD T NSM+ R A L M E G P+
Sbjct: 604 CSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPS 663
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
TYN L+ D +S + +++ A I PDI ++N +I ++CR ++ A + F
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M G+ PD +Y+ I + F+EA M ++GC P+ T N I++ +
Sbjct: 724 EMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLN 783
Query: 480 RFEEAHDIVK 489
R +EA V+
Sbjct: 784 RKDEAKLFVE 793
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 125/560 (22%), Positives = 230/560 (41%), Gaps = 79/560 (14%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV-VDE 63
G S Y ++I A S A F++M D CKP TYN++++ ++G ++
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
LV++M+ G AP+ YTY LI E +V E MK ++ T +L+
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ P +A ++L + + N+L+ + + M EA + +M ++G P
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 184 ESSTFDYTVTCLVTGLD----LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
+ +T T L++G + + I + G KP T+ ++ G+ E
Sbjct: 383 DV----FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + + L ++ ++N ++ F + M + + +EM+ P TFNTLIS
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ + + + +L+ G PD T+N+++ L R +E + L+EM + PN
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN 558
Query: 360 TITY-------------------------------NILIRSL---CAIGD-VARSLRLFQ 384
+TY +L+++L C+ D + + R F
Sbjct: 559 ELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFS 618
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKA------------------------------ 414
+++ SPDI T N+++ + R + KA
Sbjct: 619 ELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSA 678
Query: 415 -----EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
E+ +L G++PD SY+ +I A ++ R +A + F M +G PD T N
Sbjct: 679 DFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYN 738
Query: 470 LILETLVQQGRFEEAHDIVK 489
+ + FEEA +V+
Sbjct: 739 TFIGSYAADSMFEEAIGVVR 758
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 189/439 (43%), Gaps = 34/439 (7%)
Query: 29 AYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILID 88
A+ F + Q D I+I + + G V A + ++ G++ +VY+YT LI
Sbjct: 157 AFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLIS 216
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
F N+ R E V + M+E P T +++ + P
Sbjct: 217 AFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPW---------------- 260
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
++ +++ KM G P++ T++ +TC G E +
Sbjct: 261 ------------------NKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVF 302
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ G TY L++ K+ R E + LN + + ++ +YN +I + +
Sbjct: 303 EEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARD 362
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
M+D A E+ +M ++ P++ T+ TL+SG + +V + + G KP+ TF
Sbjct: 363 GMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTF 422
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N+ I +F + + E+ G+ P+ +T+N L+ G + +F++M+
Sbjct: 423 NAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 482
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
P+ TFN LI ++ R E+A + ML G+ PD +Y+ ++ AL + G +++
Sbjct: 483 AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQ 542
Query: 449 AKQTFLSMEQNGCNPDSYT 467
+++ ME C P+ T
Sbjct: 543 SEKVLAEMEDGRCKPNELT 561
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/483 (21%), Positives = 206/483 (42%), Gaps = 1/483 (0%)
Query: 16 VIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLG 75
+I L K + A F + D D ++Y LI G EA+ + K+ME G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 76 YAPNVYTYTILIDGFCN-AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
P + TY ++++ F ++ ++E MK + P+ T +L+ R +A
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
++ K+ N LL + EA +L +M G+ P T++ ++
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
L+E + + ++G KP TY L+ +AG+ + N
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
+ ++N I + +I E+ ++P++VT+NTL++ ++ + +
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
+ GF P++ TFN++I R FE A+ M++ GV P+ TYN ++ +L G
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
+S ++ +M+ R P+ T+ +L+ ++ +I + + + P
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK 598
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
L+ K EA++ F +++ G +PD T N ++ ++ +A+ ++ KER
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER 658
Query: 495 GIS 497
G +
Sbjct: 659 GFT 661
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 175/394 (44%), Gaps = 15/394 (3%)
Query: 115 EATVRSLVHGVFRCLDPHKAFELLIR----FMEREPLTQKL---VCNTLLYRLSNNSMAS 167
E+T L+ + L HK F+L +R FM+++ L V ++ L S
Sbjct: 132 ESTSSELL-AFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVS 190
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
AA + + + G+ + ++ ++ E + + G KP TY +++
Sbjct: 191 SAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVIL 250
Query: 228 EALYKAGRDVEGDRYLNHVFK-DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
K G L K D + + +YN +I C + ++ A ++ EM+
Sbjct: 251 NVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGF 310
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLEC---GFKPDKFTFNSMIDCLCRAHRFED 343
+ + VT+N L+ + K H+ +E + +L E GF P T+NS+I R ++
Sbjct: 311 SYDKVTYNALLDVYGKS---HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDE 367
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A++ ++M E G P+ TY L+ G V ++ +F++M+ P+I TFNA I+
Sbjct: 368 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 427
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ K + K F + GL PD +++ L+ ++G E F M++ G P
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 487
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ T N ++ + G FE+A + + + G++
Sbjct: 488 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVT 521
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 125/316 (39%), Gaps = 70/316 (22%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICR------- 57
G++P YN V+ AL + + + +M +CKP+ TY L+H
Sbjct: 519 GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLM 578
Query: 58 --------IGVVD--------------------EALRLVKQMEGLGYAPNVYTYTILIDG 89
GV++ EA R +++ G++P++ T ++
Sbjct: 579 HSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSI 638
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
+ + VA+ VL+ MKER P+ AT SL++ R D K+ E+L + +
Sbjct: 639 YGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ NT++Y N+ +A+ I +M + G +P+ T++ + E G++
Sbjct: 699 IISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVR 758
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
IK G +P N N+YN ++D +CK+N
Sbjct: 759 YMIKHGCRP-----------------------------------NQNTYNSIVDGYCKLN 783
Query: 270 MMDRATEICREMRDRD 285
D A ++R+ D
Sbjct: 784 RKDEAKLFVEDLRNLD 799
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 16/199 (8%)
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFN-SMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
KD + ELL L GF KF D + ++ LD N+
Sbjct: 128 KDKPESTSSELLAFLKGLGFH-KKFDLALRAFDWFMKQKDYQSMLD------------NS 174
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ I+I L G V+ + +F +Q D S D+Y++ +LI +F + +A F
Sbjct: 175 VV-AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKK 233
Query: 421 MLTLGLRPDNFSYSALIKALIKSGR-FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M G +P +Y+ ++ K G +++ M+ +G PD+YT N ++ +
Sbjct: 234 MEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGS 293
Query: 480 RFEEAHDIVKTSKERGISF 498
+EA + + K G S+
Sbjct: 294 LHQEAAQVFEEMKAAGFSY 312
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 56/140 (40%), Gaps = 20/140 (14%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P YN VI A ++ + A F +M PD TYN I + +EA
Sbjct: 694 GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEA 753
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +V+ M G PN TY ++DG+C R E +E +
Sbjct: 754 IGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL------------------ 795
Query: 125 VFRCLDPHKAFELLIRFMER 144
R LDPH +R +ER
Sbjct: 796 --RNLDPHAPKGEDLRLLER 813
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/519 (26%), Positives = 224/519 (43%), Gaps = 36/519 (6%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ NA+ID L K A F+ M+ +P+ TY ILIH +C+ G++D+
Sbjct: 329 LGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDD 388
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL + +M G VY Y LI+G+C + +L M E+ + P+ A+ L+
Sbjct: 389 ALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIA 448
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ R D A EL R M R ++ + TL+ + EAA + KM D +
Sbjct: 449 GLCRKGDLASAMELH-REMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVV 507
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P TF+ + ++ + + D + RG+ P TY L+ L ++ +
Sbjct: 508 PNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEF 567
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
++ + + +V N S ++ FCK + I EMR R + +L++F ++ K
Sbjct: 568 VDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALK 627
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ K L + E G KPD MID + AL+C +M+ G PN +T
Sbjct: 628 LHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVT 687
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIY-------------------------- 396
Y +LI LC G ++ + L ++M R P+ +
Sbjct: 688 YTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATIL 747
Query: 397 --------TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
TFN LI+ FC+ +I+ A + G PD SYS +I L K G ++
Sbjct: 748 EGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINK 807
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
A Q + M G PD N+++ G F++ I
Sbjct: 808 AFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGI 846
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 130/496 (26%), Positives = 216/496 (43%), Gaps = 39/496 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCK-P-DRFTYNILIHGICRIGVVD 62
GI+ + ++ AL+K LA F +M QCK P D + Y I C I +D
Sbjct: 155 GIAMKQYTASQILFALIKIRQFALARDLFDEMV--QCKFPLDEYVYTAGIRAYCEIRNLD 212
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A L+ +ME G + Y +L+ G C RV E V M ER + +E T R+LV
Sbjct: 213 GARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLV 272
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G R + A E+ + + C+ ++ L +A + +G+ G +
Sbjct: 273 YGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMV 332
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P + + L E + RG++P TY +L+ +L
Sbjct: 333 PNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSL------------ 380
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
CK MMD A + MR++ I + +N+LI+G+C+
Sbjct: 381 -----------------------CKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQ 417
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
H+ R LL ++E G P +++ +I LCR A++ EM GV N T
Sbjct: 418 HDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYT 477
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+ LI C G++ + RLF KM + P+ TFN +I+ +CR+ + KA + + M+
Sbjct: 478 FTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMV 537
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
GL PDN++Y +LI L + +AK+ +E N +S++ ++ ++GR
Sbjct: 538 DRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLT 597
Query: 483 EAHDIVKTSKERGISF 498
E + I + RG+
Sbjct: 598 ETYHIWDEMRARGVKL 613
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/457 (27%), Positives = 211/457 (46%), Gaps = 11/457 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + YN++I+ + ++ A +M P +Y+ LI G+CR G + A
Sbjct: 400 GIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASA 459
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L ++M G + NVYT+T LI GFC + E R+ + M + +V PNE T ++ G
Sbjct: 460 MELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEG 519
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + KAF+L + ++R +L+ L A +A + + + +
Sbjct: 520 YCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLN 579
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
S +++T L+ G L ET I D RGVK ++ +++ A K D E
Sbjct: 580 S----FSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKL-HDGEKI 634
Query: 241 RYLNHVFKDRLVSNVNSYNM-VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L K++ V N ++ +ID K + +A +M +PN+VT+ LI+
Sbjct: 635 SVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINH 694
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK + + L +L F P+ FT+N +D L E A + ++E G N
Sbjct: 695 LCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILE-GCLAN 753
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
T+T+N LI+ C G + ++ L Q PD +++ +I C++ I KA + +
Sbjct: 754 TVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWN 813
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
ML GL+PD +Y+ LI+ G FD+ + M
Sbjct: 814 EMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDM 850
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 198/426 (46%), Gaps = 3/426 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++PS Y+ +I L + + A ++M+ + + +T+ LI G C+ G +DEA
Sbjct: 435 GLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEA 494
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL +M PN T+ ++I+G+C V + F++ + M +R + P+ T RSL+
Sbjct: 495 ARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISV 554
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ L KA E + + TL+Y +E I +M RG +
Sbjct: 555 LCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLD 614
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+F V + D + + ++GVKP + +++ K V+ +
Sbjct: 615 LISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWD 674
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D NV +Y ++I+ CK + A +C EM PN T+N + +
Sbjct: 675 KMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEG 734
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E+ K + L +LE G + TFN++I C+A + + A+D + E G P+ I+Y+
Sbjct: 735 ELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYS 793
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN-KIEKAEKAFFSMLT 423
+I LC +GD+ ++ +L+ +M + PDI +N LI+ +C ++ + +K + M+
Sbjct: 794 TIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIR-WCNIHGEFDKGLGIYSDMVN 852
Query: 424 LGLRPD 429
L D
Sbjct: 853 LKYADD 858
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 102/211 (48%)
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
+ I +C+ + R LL + G K +N ++ LCR +R +A++ + M
Sbjct: 197 VYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSM 256
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
VE G+ + +TY L+ C ++ +L + M + P + + + ++ + I
Sbjct: 257 VERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHI 316
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
+KA + + LG+ P+ F+ +ALI L K RF EA++ F M G P+ T ++
Sbjct: 317 DKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAIL 376
Query: 472 LETLVQQGRFEEAHDIVKTSKERGISFKSFP 502
+ +L ++G ++A + +E+GI +P
Sbjct: 377 IHSLCKRGMMDDALCMFDRMREKGIRVTVYP 407
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%)
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A ++ R IA T + ++ K + R+L +++C F D++ + + I
Sbjct: 144 AADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIR 203
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
C + A L+ M GV + + YN+L+ LC V ++ + M I
Sbjct: 204 AYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVA 263
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
D T+ L+ FCR ++E A + ML+L P S S ++ L K G D+A +
Sbjct: 264 DEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLA 323
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ + G P+ + N +++ L + RF EA + + RG+
Sbjct: 324 CHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGL 366
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 170/327 (51%)
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
++L K+ G P TF + L +++ + D + RG++P TY +++ +L
Sbjct: 118 SVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSL 177
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
K+G+ E +L + K V NV +Y+ +ID +C MD A + M + PN+
Sbjct: 178 SKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNV 237
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
T+ +L++G+CK + + +LL L G PD TF ++I LCRA R A
Sbjct: 238 YTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRY 297
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
+ G PN +TY +L+ LC G++ + LFQ+MQ + P++ + LI S C+ K
Sbjct: 298 ICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGK 357
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
I+ ++ F ++ GL+P+ ++Y+AL+ AL K G EA + F ME++GC PD N+
Sbjct: 358 IKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNV 417
Query: 471 ILETLVQQGRFEEAHDIVKTSKERGIS 497
I++ +Q A +V+ RG S
Sbjct: 418 IIQGFLQHKDPSMARQLVEEMVNRGFS 444
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 203/451 (45%), Gaps = 47/451 (10%)
Query: 27 DLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTIL 86
D A F+ M + + P ++ L I R+G + + L K++E LG ++++ +IL
Sbjct: 44 DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103
Query: 87 IDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAF------ELLIR 140
I+ FC+ RV VL + + + P+ T +L++G+ C++ ++L+R
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGL--CMEGKMDQVMMLYDDMLVR 161
Query: 141 FMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLD 200
++ T ++ N+L S + A+EA L++M G +P + +
Sbjct: 162 GLQPNVYTYNVIINSL----SKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQ 217
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
++E + D + +G P NV +Y
Sbjct: 218 MDEARSVFDLMVSKGCTP-----------------------------------NVYTYTS 242
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
+++ +CK+ ++ A ++ E + + P++VTF T+ISG C+ ++L + G
Sbjct: 243 LMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHG 302
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
P+ T+ ++D LC+ E+A EM V PN + Y ILI SLC G +
Sbjct: 303 HTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGK 362
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
LF ++ + + P++YT+ AL+ + C+ I +A K F M G PD +Y+ +I+
Sbjct: 363 ELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGF 422
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
++ A+Q M G + D+ T L+
Sbjct: 423 LQHKDPSMARQLVEEMVNRGFSADAATRALL 453
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 153/324 (47%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ PS + +++ L +D + + M V +P+ +TYN++I+ + + G +E
Sbjct: 126 LGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANE 185
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL +KQME +G PNV Y+ LIDG+C ++ E V ++M + PN T SL++
Sbjct: 186 ALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMN 245
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + +A +LL + + + + T++ L A + R + G+ P
Sbjct: 246 GYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTP 305
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ + L +L E + + VKP Y +L+++L K G+ +G
Sbjct: 306 NIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELF 365
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + L NV +Y ++ CK ++ A ++ R+M + P+ +N +I G +
Sbjct: 366 SRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQH 425
Query: 304 AEVHKTRELLVMLLECGFKPDKFT 327
+ R+L+ ++ GF D T
Sbjct: 426 KDPSMARQLVEEMVNRGFSADAAT 449
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 174/409 (42%), Gaps = 44/409 (10%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I FLGI + +I+ + +D ++ +P T+ L++G+C G
Sbjct: 88 IEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGK 147
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+D+ + L M G PNVYTY ++I+ + + E L+ M++ PN +
Sbjct: 148 MDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYST 207
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G CL EA ++ M +G
Sbjct: 208 LIDGY--CL---------------------------------RGQMDEARSVFDLMVSKG 232
Query: 181 YLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
P YT T L+ G + E +LD +++G+ P T+ ++ L +AGR
Sbjct: 233 CTPNV----YTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRP 288
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
+ + ++ N+ +Y +++D CK ++ A + +EM+ + PNLV + L
Sbjct: 289 LAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTIL 348
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
I CK ++ +EL L++ G KP+ +T+ +++ LC+ +A +M E G
Sbjct: 349 IDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGC 408
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
P+ YN++I+ D + + +L ++M S D T AL+ F
Sbjct: 409 TPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT-RALLNDF 456
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 132/232 (56%)
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+++S +++I+CFC ++ +D + ++ + P++VTF TL++G C + ++ + L
Sbjct: 95 QDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMML 154
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+L G +P+ +T+N +I+ L ++ + +AL L +M + G PN + Y+ LI C
Sbjct: 155 YDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCL 214
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G + + +F M + +P++YT+ +L+ +C++ +IE+A + L GL PD +
Sbjct: 215 RGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVT 274
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
++ +I L ++GR A+Q F + +G P+ T ++L+ L + G EEA
Sbjct: 275 FTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEA 326
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 100/204 (49%)
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
+ +E+ I ++ + + LI+ C V +L +L+ G +P TF ++++ LC
Sbjct: 84 LSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLC 143
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
+ + + +M+ G+ PN TYN++I SL G +L ++M+ P++
Sbjct: 144 MEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVV 203
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
++ LI +C ++++A F M++ G P+ ++Y++L+ K R +EA Q
Sbjct: 204 NYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDET 263
Query: 457 EQNGCNPDSYTSNLILETLVQQGR 480
+ G PD T I+ L + GR
Sbjct: 264 LRKGLVPDIVTFTTIISGLCRAGR 287
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 81/173 (46%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P F+ + + R +E + E+ G+ + + +ILI C + V L +
Sbjct: 60 PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
K+ + P I TF L+ C K+++ + ML GL+P+ ++Y+ +I +L K
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
SG+ +EA ME+ GC P+ + +++ +G+ +EA + +G
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKG 232
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 75/154 (48%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+DAL M+ P + ++ L S+ +G + L ++++ I DI++ + L
Sbjct: 44 DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I FC +++++ +L LGL P +++ L+ L G+ D+ + M G
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
P+ YT N+I+ +L + G+ EA +K ++ G
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVG 197
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 211/465 (45%), Gaps = 1/465 (0%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAP-NVYTYTILIDGFC 91
F ++ +PD F +N + G + EA+ ++++M G P N ++Y ++I G
Sbjct: 148 FGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMW 207
Query: 92 NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL 151
A R + V + M ER V PN T +++ G + D F L + + +
Sbjct: 208 RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAI 267
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
N LL L E +A+L +M + +P+ T+ L D +
Sbjct: 268 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKS 327
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+K GV T +L+ L K G+ + L + LV YN +I+ +C+ +
Sbjct: 328 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 387
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
+ A +M+ R I P+ +T+N LI+G CK + ++LL+ + + G P TFN++
Sbjct: 388 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 447
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
ID R + E LSEM E G+ PN ++Y ++ + C G + ++ + M +
Sbjct: 448 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 507
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
P+ +NA+I ++ ++A M + G+ P +Y+ LIK L + EA++
Sbjct: 508 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 567
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
S+ + PD+ + N ++ +G ++A D+ + + GI
Sbjct: 568 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 612
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 214/482 (44%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ YN VI + ++ A F +M+ P+ TYN +I G + G ++ L
Sbjct: 194 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSL 253
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
QM G PN TY +L+ G C A R+ E +L+ M + + P+ T L G+ R
Sbjct: 254 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 313
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D L + ++ C+ LL L + S A +L+ + + G +P
Sbjct: 314 NGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 373
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + +L R +KP TY L+ L KA R L +
Sbjct: 374 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 433
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ + V ++N +ID + + +++ + EM++ + PN+V++ ++++ CK+ ++
Sbjct: 434 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 493
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ +L + P+ +N++ID + A + +M G+ P+ +TYN+LI
Sbjct: 494 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 553
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+ LC ++ + + + R+ PD ++N LI + C I+KA M G++
Sbjct: 554 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 613
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+Y LI L +GR E + + M QN P + N+++E + G +A D+
Sbjct: 614 STVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDL 673
Query: 488 VK 489
K
Sbjct: 674 RK 675
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 185/418 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN ++ L ++ + +M+ + PD FTY+IL G+ R G
Sbjct: 261 GLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAM 320
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L + G YT +IL++G C +V+ VL+ + + P +L++G
Sbjct: 321 LSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLING 380
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + AF + R + N L+ L + A +L +M D G P
Sbjct: 381 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 440
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + L + +L + G+KP +Y ++ A K G+ E L+
Sbjct: 441 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 500
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+F ++ N YN +ID + + D+A + +M+ I+P++VT+N LI G C +
Sbjct: 501 DMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQS 560
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + E++ L PD ++N++I C + ALD M ++G+ TY+
Sbjct: 561 QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYH 620
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
LI L G + L+QKM + + P N +++++ + KAE ML
Sbjct: 621 QLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEML 678
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 200/445 (44%), Gaps = 5/445 (1%)
Query: 57 RIGVVDEALRLVKQM--EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPN 114
R+ + D ALRL+ + E P++ + +L++ + R A+V R I+ P+
Sbjct: 100 RLRLPDGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPD 159
Query: 115 EATVRSLVHGVFRCLDPHKAFELLIRFMERE--PLTQKLVCNTLLYRLSNNSMASEAAAI 172
V D +A +L R M R+ P N ++ + +A +
Sbjct: 160 TFAWNKAVQACVAAGDLGEAVGML-RRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEV 218
Query: 173 LRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK 232
+M +R LP T++ + + G DL + D + G+KP TY +L+ L +
Sbjct: 219 FDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCR 278
Query: 233 AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
AGR E L+ + ++V + +Y+++ D + + + + T
Sbjct: 279 AGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYT 338
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+ L++G CKD +V E+L L+ G P + +N++I+ C+ E A +M
Sbjct: 339 CSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK 398
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
+ P+ ITYN LI LC + + L +MQ + ++P + TFN LI ++ R ++E
Sbjct: 399 SRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLE 458
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
K M GL+P+ SY +++ A K+G+ EA M P++ N I+
Sbjct: 459 KCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII 518
Query: 473 ETLVQQGRFEEAHDIVKTSKERGIS 497
+ V+ G ++A +V+ K GIS
Sbjct: 519 DAYVEHGPNDQAFILVEKMKSNGIS 543
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 202/457 (44%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ YN +ID +K ++ + QM KP+ TYN+L+ G+CR G + E L
Sbjct: 229 PNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSAL 288
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M P+ +TY+IL DG + + + V + T L++G+ +
Sbjct: 289 LDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCK 348
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
A E+L + + +++ NTL+ A + +M R P+ T
Sbjct: 349 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHIT 408
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + L + +L GV P T+ L++A + G+ + L+ +
Sbjct: 409 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 468
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
++ L NV SY +++ FCK + A I +M +D+ PN +N +I + +
Sbjct: 469 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPND 528
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ L+ + G P T+N +I LC + +A + ++ + + P+ ++YN LI
Sbjct: 529 QAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 588
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+ C G++ ++L L Q+M I + T++ LI ++ + E + M+ +
Sbjct: 589 SACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVV 648
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
P N ++ +++A K G +A+ M Q N D
Sbjct: 649 PSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHD 685
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 101/238 (42%), Gaps = 3/238 (1%)
Query: 267 KVNMMDRATEICREMRD--RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
++ + D A + ++ D R P+L + N L+ R +L G +PD
Sbjct: 100 RLRLPDGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPD 159
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP-NTITYNILIRSLCAIGDVARSLRLF 383
F +N + A +A+ L M G PP N +YN++I + G ++ +F
Sbjct: 160 TFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVF 219
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+M + P+ T+N +I + +E M+ GL+P+ +Y+ L+ L ++
Sbjct: 220 DEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRA 279
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
GR E M PD +T +++ + L + G + + S + G++ +
Sbjct: 280 GRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDY 337
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 212/472 (44%), Gaps = 7/472 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN +I AL +++ +D A +MS C PD ++ ++ G+C++G V+EA
Sbjct: 99 GVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA 158
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + P +Y ++ C R+ EVF V+ M +R + PN T ++V
Sbjct: 159 RGFLAET-----VPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDA 213
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A +L R + L L+ + +A ++ M D G+ P
Sbjct: 214 FCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPS 273
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL- 243
+ +++ + L DL ++ + + P +TY L++ AG D++G +
Sbjct: 274 TISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAG-DLDGAMLIW 332
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + NV Y +ID CK M D+A + +M + PN VTFNTLI C
Sbjct: 333 NEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDC 392
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V + + + G P+ T+N ++ L R +DA + EM+ G + +TY
Sbjct: 393 GRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTY 452
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N +I LC + ++ L +M I PD +TFNA+I ++C+ K+ A M
Sbjct: 453 NTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNA 512
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ + +Y+ LI L G+ A L M G P+ T N+++ +
Sbjct: 513 VNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 564
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 207/481 (43%), Gaps = 6/481 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCK-PDRFTYNILIHGICRIGVVDE 63
G++ + A I A ++ S D A F + S C+ P YN L+ + R +V
Sbjct: 28 GVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGA 87
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ + M G PNVYTY +LI C RV ++L+ M + P+E + ++V
Sbjct: 88 VVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVS 147
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +A L E P+ N +++ L E +++ +M RG P
Sbjct: 148 GMCKLGRVEEARGFLA---ETVPVQASY--NAVVHALCGEFRMWEVFSVVNEMVQRGLQP 202
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ V +L C IL + G P T+ L++ ++ G+ +
Sbjct: 203 NVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMW 262
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + + SYN++I C + + A + M+ + PN T++TL+ G
Sbjct: 263 HWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNA 322
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + + G KP+ + +MID LC+ F+ A + +M+ PPNT+T+
Sbjct: 323 GDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTF 382
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI LC G V R+L +F M+ + P+ T+N L+ R + A ML
Sbjct: 383 NTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLN 442
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G +Y+ +I L + A M G PD++T N I+ ++G+
Sbjct: 443 NGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSI 502
Query: 484 A 484
A
Sbjct: 503 A 503
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 177/410 (43%), Gaps = 10/410 (2%)
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME---RE 145
G A V V L+ M+ R V E + + + R +A + R + R+
Sbjct: 7 GLPAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRD 66
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
P + V N LL L +M + M G P T++ + L ++
Sbjct: 67 PGVR--VYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAAR 124
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
+LD ++G P ++ ++ + K GR E +L V SYN V+
Sbjct: 125 KMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET-----VPVQASYNAVVHAL 179
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C M + EM R + PN+VT+ T++ CK E+ +L ++ G P+
Sbjct: 180 CGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNV 239
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
TF +++ + DAL MV+ G P+TI+YN+LIR LC IGD+ +L F
Sbjct: 240 LTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNS 299
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M+ + + P+ T++ L+ F ++ A + M + G +P+ Y+ +I L K
Sbjct: 300 MKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMM 359
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
FD+A+ M + C P++ T N ++ L GR A ++ + G
Sbjct: 360 FDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG 409
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/473 (24%), Positives = 191/473 (40%), Gaps = 45/473 (9%)
Query: 19 ALVKSNSIDLAYLKFQQMSVD--QCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLG- 75
L + +D Q+M + C D I R G D AL+ + LG
Sbjct: 7 GLPAAGDVDGVQYALQEMRLRGVACTEDALV--AAIGAFARAGSADRALKTFYRASDLGC 64
Query: 76 YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAF 135
P V Y L+D V V V + M++ V PN T +
Sbjct: 65 RDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYT-----------------Y 107
Query: 136 ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCL 195
LLIR L N A +L +M +G P+ + V+ +
Sbjct: 108 NLLIR------------------ALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGM 149
Query: 196 VTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNV 255
+ E G L + P ++Y ++ AL R E +N + + L NV
Sbjct: 150 CKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNV 204
Query: 256 NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
+Y ++D FCK + A I M PN++TF L+ G +D +VH +
Sbjct: 205 VTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHW 264
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
+++ G+ P ++N +I LC + ALD + M + PN TY+ L+ GD
Sbjct: 265 MVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGD 324
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+ ++ ++ +M++ P++ + +I C+ ++AE ML P+ +++
Sbjct: 325 LDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNT 384
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
LI L GR A F M +NGC+P+ T N +L L ++G ++A +V
Sbjct: 385 LIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMV 437
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 164/386 (42%), Gaps = 2/386 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y ++DA K+ + +A +M C P+ T+ L+ G G V +A
Sbjct: 199 GLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDA 258
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + M G+AP+ +Y +LI G C + MK + PN T +LV G
Sbjct: 259 LSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDG 318
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
D A + +V ++ L M +A +++ KM P
Sbjct: 319 FSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPN 378
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ TF+ + L + + + G P TY L+ L++ G + +
Sbjct: 379 TVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVI 438
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++ +YN VI+C C++ M A + M + I P+ TFN +I +CK+
Sbjct: 439 EMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEG 498
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V LL + + + +I LC + +A+ L +M+ G+ PN T+N
Sbjct: 499 KVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWN 558
Query: 365 ILIRSL-CAIGDVARSLRLFQKMQAD 389
+L+R++ IG + + LF+ + D
Sbjct: 559 VLVRAIFTNIGTIG-PIHLFKYIVED 583
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 130/287 (45%), Gaps = 12/287 (4%)
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS----NVNSYNMVIDCFCKVN 269
RGV + + A +AG DR L ++ + V YN ++D + N
Sbjct: 27 RGVACTEDALVAAIGAFARAG---SADRALKTFYRASDLGCRDPGVRVYNHLLDALLREN 83
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
M+ + MR + PN+ T+N LI C++ V R++L + G PD+ +
Sbjct: 84 MVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHG 143
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+++ +C+ R E+A L+E V P +YN ++ +LC + + +M
Sbjct: 144 TIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQR 198
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ P++ T+ ++ +FC+ ++ A M+++G P+ +++AL+K + G+ +A
Sbjct: 199 GLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDA 258
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ M G P + + N+++ L G + A D + K +
Sbjct: 259 LSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNAL 305
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/529 (24%), Positives = 235/529 (44%), Gaps = 38/529 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ Y+ +I A+ K + +L ++M P T+ +I G + EA
Sbjct: 290 GVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEA 349
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LRL ++M G N+ T L+ G+C + + + E + PN+ T L+ G
Sbjct: 350 LRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEG 409
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KA EL + N+LL + EA+ + + D G +
Sbjct: 410 CCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VAN 468
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYL-LLMEALYKAGRDVEGDRYL 243
T++ ++ L G ++E C +LD + +G+ P +Y +++ K D+ +
Sbjct: 469 IFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFS 528
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +D L NV +Y+++ID K ++A ++ +M +IAP TFNT+I+G CK
Sbjct: 529 DMLARD-LKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKV 587
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + R+ L LE GF P T+NS++D + + AL EM E+GV PN +TY
Sbjct: 588 GQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTY 647
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI C + +L+ +M+ + D+ ++ALI FC+ +E A+ FF +L
Sbjct: 648 TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLE 707
Query: 424 LGLRPDNF-----------------------------------SYSALIKALIKSGRFDE 448
+GL P+ +Y+ LI L+K GR
Sbjct: 708 VGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVF 767
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
A ++ M G PD T ++++ L +G+ E A I++ + ++
Sbjct: 768 ASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMT 816
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/514 (25%), Positives = 222/514 (43%), Gaps = 36/514 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P N ++ ALV+ N I + +M + D FT ++++ + G V+EA
Sbjct: 221 VIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAE 280
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV--- 122
++ + G + Y+I+I C +LE MKER P+EAT S++
Sbjct: 281 EYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVAC 340
Query: 123 -------------HGVFRCLDP-------------------HKAFELLIRFMEREPLTQK 150
+ C P A L + E K
Sbjct: 341 VAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNK 400
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
+ + L+ N+ +A+ + +M G P + + + E + D
Sbjct: 401 VTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDE 460
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
+ GV F TY ++M L K G+ E L+++ +V NV SYN +I C+
Sbjct: 461 AVDCGVANIF-TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGN 519
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
MD A+ + +M RD+ PN+VT++ LI G+ K + K +L +L P FTFN+
Sbjct: 520 MDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNT 579
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I+ LC+ + +A D L +E G P+ +TYN ++ G++ +L ++++M
Sbjct: 580 IINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFG 639
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+SP++ T+ +LI FC+ N+I+ A K M GL D +YSALI K + A+
Sbjct: 640 VSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQ 699
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
F + + G +P+ N ++ E A
Sbjct: 700 DLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAA 733
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 121/528 (22%), Positives = 234/528 (44%), Gaps = 38/528 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKP-DRFTYNILIHGICRIGVVDE 63
G PS + +VI A V ++ + L+ ++ ++ KP + L+ G C G +D
Sbjct: 325 GWVPSEATFTSVIVACVAQGNM-VEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDS 383
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L ++ G PN TY++LI+G CN+ + + + MK + P+ V SL+
Sbjct: 384 ALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLR 443
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + +A +L ++ + N ++ L EA ++L M ++G +P
Sbjct: 444 GYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVP 502
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEA-------------- 229
+++ + +++ + + R +KP TY +L++
Sbjct: 503 NVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLF 562
Query: 230 ---------------------LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
L K G+ E L + ++ + + +YN ++D F K
Sbjct: 563 DQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKE 622
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+D A + REM + ++PN+VT+ +LI+G CK + + + E G + D +
Sbjct: 623 GNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAY 682
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+++ID C+ E A D E++E G+ PN I YN +I + ++ +L ++KM
Sbjct: 683 SALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMIN 742
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
DRI D+ T+ LI + ++ A + ML+ G+ PD ++ L+ L G+ +
Sbjct: 743 DRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLEN 802
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
A++ M++ P N ++ ++G +EA + +RG+
Sbjct: 803 ARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGL 850
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 212/445 (47%), Gaps = 9/445 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI PS N+++ +K+ + A F + +VD + FTYNI++ +C+ G +DEA
Sbjct: 430 GIPPSVFNVNSLLRGYLKAPLWEEASKLFDE-AVDCGVANIFTYNIMMSWLCKGGKMDEA 488
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G PNV +Y +I G C + V M R++ PN T L+ G
Sbjct: 489 CSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDG 548
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ D KA +L + + NT++ L SEA L+ + G++P
Sbjct: 549 NFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPS 608
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ V + +++ + + GV P TY L+ K+ R + +
Sbjct: 609 CMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRD 668
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG----H 300
+ + L +V +Y+ +ID FCK M+ A ++ E+ + ++PN + +N++ISG +
Sbjct: 669 EMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLN 728
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+A + ++++ + C D T+ ++ID L + R A D EM+ G+ P+
Sbjct: 729 NMEAALVWYKKMINDRIPC----DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDI 784
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
IT+++L+ LC G + + ++ ++M ++P + +N LI + R +++A
Sbjct: 785 ITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDE 844
Query: 421 MLTLGLRPDNFSYSALIKALIKSGR 445
ML GL PD+ +Y LI K R
Sbjct: 845 MLDRGLVPDDVTYDILINGKFKGDR 869
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 143/306 (46%), Gaps = 1/306 (0%)
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P + +T LV + E + + + RG+ T +++ A K GR E +
Sbjct: 222 IPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEE 281
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
Y + + + +Y+++I CK + E+ EM++R P+ TF ++I
Sbjct: 282 YFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACV 341
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ + L ++ CG + S++ C + AL+ +++ E G+ PN +
Sbjct: 342 AQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKV 401
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY++LI C G++ ++ L+ +M+ + I P ++ N+L++ + + E+A K F
Sbjct: 402 TYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEA 461
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ G+ + F+Y+ ++ L K G+ DEA +M G P+ + N ++ ++G
Sbjct: 462 VDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNM 520
Query: 482 EEAHDI 487
+ A +
Sbjct: 521 DMASSV 526
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 152/338 (44%), Gaps = 37/338 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L I+P+ +N +I+ L K + A K + + P TYN ++ G + G +D
Sbjct: 568 LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDS 627
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL + ++M G +PNV TYT LI+GFC + R+ + + M+E+ + + +L+
Sbjct: 628 ALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALID 687
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN-NSMASEAAAILRKMGDRGYL 182
G + D A +L +E ++V N+++ + N+M + + + DR
Sbjct: 688 GFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDR--- 744
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+ C TY L++ L K GR V
Sbjct: 745 ---------IPC------------------------DLGTYTTLIDGLLKEGRLVFASDL 771
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ +V ++ +++++++ C ++ A +I EM +++ P+++ +NTLI+G+ +
Sbjct: 772 YMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFR 831
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
+ + + L +L+ G PD T++ +I+ + R
Sbjct: 832 EGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 869
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 116/275 (42%), Gaps = 35/275 (12%)
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
+N +++ + + N ++ A + M +D+ P + N L++ + + + R+L ++
Sbjct: 193 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 252
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
G D FT + M+ + R E+A + E E GV + Y+I+I+++C +
Sbjct: 253 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSN 312
Query: 378 RSLRLFQKMQADRISPDIYTFNALI----------------------------------- 402
L L ++M+ P TF ++I
Sbjct: 313 LGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLM 372
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+ +C ++ A F + GL P+ +YS LI+ SG ++A + + M+ NG
Sbjct: 373 KGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 432
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
P + N +L ++ +EEA + + + G++
Sbjct: 433 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA 467
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%)
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
N +SG + V L+ F+ D FN +++ RA+R E+A+DC + M+
Sbjct: 158 LNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMI 217
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
V P NIL+ +L + L+ KM I D +T + ++++ + ++E
Sbjct: 218 CQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVE 277
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
+AE+ F G++ D +YS +I+A+ K + + M++ G P T ++
Sbjct: 278 EAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVI 337
Query: 473 ETLVQQGRFEEA 484
V QG EA
Sbjct: 338 VACVAQGNMVEA 349
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%)
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
D FN L+ ++ R N+IE A F +M+ + P + L+ AL++ E + +
Sbjct: 189 DHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLY 248
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
M G D +T ++++ +++GR EEA + + +KERG+ +
Sbjct: 249 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDA 295
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/529 (24%), Positives = 235/529 (44%), Gaps = 38/529 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ Y+ +I A+ K + +L ++M P T+ +I G + EA
Sbjct: 250 GVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEA 309
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LRL ++M G N+ T L+ G+C + + + E + PN+ T L+ G
Sbjct: 310 LRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEG 369
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KA EL + N+LL + EA+ + + D G +
Sbjct: 370 CCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VAN 428
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYL-LLMEALYKAGRDVEGDRYL 243
T++ ++ L G ++E C +LD + +G+ P +Y +++ K D+ +
Sbjct: 429 IFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFS 488
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +D L NV +Y+++ID K ++A ++ +M +IAP TFNT+I+G CK
Sbjct: 489 DMLARD-LKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKV 547
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + R+ L LE GF P T+NS++D + + AL EM E+GV PN +TY
Sbjct: 548 GQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTY 607
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI C + +L+ +M+ + D+ ++ALI FC+ +E A+ FF +L
Sbjct: 608 TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLE 667
Query: 424 LGLRPDNF-----------------------------------SYSALIKALIKSGRFDE 448
+GL P+ +Y+ LI L+K GR
Sbjct: 668 VGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVF 727
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
A ++ M G PD T ++++ L +G+ E A I++ + ++
Sbjct: 728 ASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMT 776
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/514 (25%), Positives = 222/514 (43%), Gaps = 36/514 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P N ++ ALV+ N I + +M + D FT ++++ + G V+EA
Sbjct: 181 VIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAE 240
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV--- 122
++ + G + Y+I+I C +LE MKER P+EAT S++
Sbjct: 241 EYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVAC 300
Query: 123 -------------HGVFRCLDP-------------------HKAFELLIRFMEREPLTQK 150
+ C P A L + E K
Sbjct: 301 VAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNK 360
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
+ + L+ N+ +A+ + +M G P + + + E + D
Sbjct: 361 VTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDE 420
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
+ GV F TY ++M L K G+ E L+++ +V NV SYN +I C+
Sbjct: 421 AVDCGVANIF-TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGN 479
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
MD A+ + +M RD+ PN+VT++ LI G+ K + K +L +L P FTFN+
Sbjct: 480 MDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNT 539
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I+ LC+ + +A D L +E G P+ +TYN ++ G++ +L ++++M
Sbjct: 540 IINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFG 599
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+SP++ T+ +LI FC+ N+I+ A K M GL D +YSALI K + A+
Sbjct: 600 VSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQ 659
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
F + + G +P+ N ++ E A
Sbjct: 660 DLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAA 693
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 212/445 (47%), Gaps = 9/445 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI PS N+++ +K+ + A F + +VD + FTYNI++ +C+ G +DEA
Sbjct: 390 GIPPSVFNVNSLLRGYLKAPLWEEASKLFDE-AVDCGVANIFTYNIMMSWLCKGGKMDEA 448
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G PNV +Y +I G C + V M R++ PN T L+ G
Sbjct: 449 CSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDG 508
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ D KA +L + + NT++ L SEA L+ + G++P
Sbjct: 509 NFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPS 568
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ V + +++ + + GV P TY L+ K+ R + +
Sbjct: 569 CMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRD 628
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG----H 300
+ + L +V +Y+ +ID FCK M+ A ++ E+ + ++PN + +N++ISG +
Sbjct: 629 EMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLN 688
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+A + ++++ + C D T+ ++ID L + R A D EM+ G+ P+
Sbjct: 689 NMEAALVWYKKMINDRIPC----DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDI 744
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
IT+++L+ LC G + + ++ ++M ++P + +N LI + R +++A
Sbjct: 745 ITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDE 804
Query: 421 MLTLGLRPDNFSYSALIKALIKSGR 445
ML GL PD+ +Y LI K R
Sbjct: 805 MLDRGLVPDDVTYDILINGKFKGDR 829
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 121/528 (22%), Positives = 234/528 (44%), Gaps = 38/528 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKP-DRFTYNILIHGICRIGVVDE 63
G PS + +VI A V ++ + L+ ++ ++ KP + L+ G C G +D
Sbjct: 285 GWVPSEATFTSVIVACVAQGNM-VEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDS 343
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L ++ G PN TY++LI+G CN+ + + + MK + P+ V SL+
Sbjct: 344 ALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLR 403
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + +A +L ++ + N ++ L EA ++L M ++G +P
Sbjct: 404 GYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVP 462
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEA-------------- 229
+++ + +++ + + R +KP TY +L++
Sbjct: 463 NVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLF 522
Query: 230 ---------------------LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
L K G+ E L + ++ + + +YN ++D F K
Sbjct: 523 DQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKE 582
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+D A + REM + ++PN+VT+ +LI+G CK + + + E G + D +
Sbjct: 583 GNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAY 642
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+++ID C+ E A D E++E G+ PN I YN +I + ++ +L ++KM
Sbjct: 643 SALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMIN 702
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
DRI D+ T+ LI + ++ A + ML+ G+ PD ++ L+ L G+ +
Sbjct: 703 DRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLEN 762
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
A++ M++ P N ++ ++G +EA + +RG+
Sbjct: 763 ARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGL 810
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 143/306 (46%), Gaps = 1/306 (0%)
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P + +T LV + E + + + RG+ T +++ A K GR E +
Sbjct: 182 IPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEE 241
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
Y + + + +Y+++I CK + E+ EM++R P+ TF ++I
Sbjct: 242 YFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACV 301
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ + L ++ CG + S++ C + AL+ +++ E G+ PN +
Sbjct: 302 AQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKV 361
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY++LI C G++ ++ L+ +M+ + I P ++ N+L++ + + E+A K F
Sbjct: 362 TYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEA 421
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ G+ + F+Y+ ++ L K G+ DEA +M G P+ + N ++ ++G
Sbjct: 422 VDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNM 480
Query: 482 EEAHDI 487
+ A +
Sbjct: 481 DMASSV 486
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 152/339 (44%), Gaps = 39/339 (11%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L I+P+ +N +I+ L K + A K + + P TYN ++ G + G +D
Sbjct: 528 LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDS 587
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL + ++M G +PNV TYT LI+GFC + R+ + + M+E+ + + +L+
Sbjct: 588 ALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALID 647
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL--YRLSNNSMASEAAAILRKMGDRGY 181
G + D A +L +E ++V N+++ +R NN EAA + K
Sbjct: 648 GFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNN---MEAALVWYK------ 698
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
I + TY L++ L K GR V
Sbjct: 699 ----------------------------KMINDRIPCDLGTYTTLIDGLLKEGRLVFASD 730
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ +V ++ +++++++ C ++ A +I EM +++ P+++ +NTLI+G+
Sbjct: 731 LYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYF 790
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
++ + + L +L+ G PD T++ +I+ + R
Sbjct: 791 REGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 829
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 116/275 (42%), Gaps = 35/275 (12%)
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
+N +++ + + N ++ A + M +D+ P + N L++ + + + R+L ++
Sbjct: 153 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 212
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
G D FT + M+ + R E+A + E E GV + Y+I+I+++C +
Sbjct: 213 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSN 272
Query: 378 RSLRLFQKMQADRISPDIYTFNALI----------------------------------- 402
L L ++M+ P TF ++I
Sbjct: 273 LGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLM 332
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+ +C ++ A F + GL P+ +YS LI+ SG ++A + + M+ NG
Sbjct: 333 KGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 392
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
P + N +L ++ +EEA + + + G++
Sbjct: 393 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA 427
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%)
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
N +SG + V L+ F+ D FN +++ RA+R E+A+DC + M+
Sbjct: 118 LNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMI 177
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
V P NIL+ +L + L+ KM I D +T + ++++ + ++E
Sbjct: 178 CQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVE 237
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
+AE+ F G++ D +YS +I+A+ K + + M++ G P T ++
Sbjct: 238 EAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVI 297
Query: 473 ETLVQQGRFEEA 484
V QG EA
Sbjct: 298 VACVAQGNMVEA 309
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%)
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
D FN L+ ++ R N+IE A F +M+ + P + L+ AL++ E + +
Sbjct: 149 DHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLY 208
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
M G D +T ++++ +++GR EEA + + +KERG+ +
Sbjct: 209 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDA 255
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/503 (26%), Positives = 229/503 (45%), Gaps = 14/503 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP N ++ L + A F +M+ + + TY LIH +C+ ++DEA
Sbjct: 41 GLSPDPVELNTILAELCDARDTTTAMALFDKMA-ELGAVNHTTYYNLIHPLCKARLLDEA 99
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ M+ G P + ++I G C A R+ V M + + P+ T LVHG
Sbjct: 100 MGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHP-PDFLTYTKLVHG 158
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A ++L + + ++ L +A ++ +M RG
Sbjct: 159 LSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAAN 218
Query: 185 SSTFDYTVTCLVTGLDLNETCGIL-DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ V L L+E +L +RG P TY +++ L KAGR R
Sbjct: 219 AITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRL----RDA 274
Query: 244 NHVFKD-RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+F++ +YN +I +C+ MD A + +M D + AP+++T+ TL+S CK
Sbjct: 275 VDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCK 334
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ EL ++ PD TF S++D LC R EDAL+ L E+ G PP T
Sbjct: 335 MGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYT 394
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN ++ C V ++ L ++ P+ T+N L+ CR + ++A + +
Sbjct: 395 YNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLN 454
Query: 423 TLGLR-PDNFS-YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+ G P + + Y+ ++ AL + GR D+A Q + M Q G P + T ++ L + +
Sbjct: 455 SEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQ 514
Query: 481 FEEAHDIVKTSKERGISFKSFPG 503
++AH+++ E I + PG
Sbjct: 515 PQQAHELL----EEMIKYGHTPG 533
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 217/450 (48%), Gaps = 7/450 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P T L+N VI L ++ + A ++QM+ D PD TY L+HG+ + G + +A
Sbjct: 110 GMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKAGRLRDA 168
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++++++M + P+ T T+++ C RV + ++E M R + N T +LV G
Sbjct: 169 VQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDG 228
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ +C +A LL+ + R T +V +T++ L +A I +M P
Sbjct: 229 LCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAP 285
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + D++E +L + P TY LM A K GR +
Sbjct: 286 TAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELF 345
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ ++L +V ++ ++D C M+ A E+ E+ R P + T+N ++ G+CK
Sbjct: 346 QQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKS 405
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP-PNTIT 362
+V K EL+ GF P+ T+N ++ CRA R + AL L ++ G P P ++
Sbjct: 406 NQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVA 465
Query: 363 -YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y I++ +LC G +++ +++M P TF ++ + C+ ++ ++A + M
Sbjct: 466 MYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEM 525
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
+ G P + A++ A ++G +A +
Sbjct: 526 IKYGHTPGPGTCDAVVSAYCRAGMIQKADE 555
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 153/353 (43%), Gaps = 48/353 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P Y+ VID L K+ + A F++MS C P TYN LI G CR G +DEA
Sbjct: 250 GFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEA 306
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+RL+ +M AP+V TYT L+ FC R+ + + + + M + P+ T SLV G
Sbjct: 307 IRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDG 366
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
L +A +L ++ RG P
Sbjct: 367 -----------------------------------LCGEGRMEDALELLEEITRRGCPPT 391
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
YT C+V G + + ++ F RG P TY +L+ +AGR +
Sbjct: 392 I----YTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQAL 447
Query: 241 RYLNHVFKDR--LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+YL+ + + ++V Y +++D C+ D A + EM R P TF T++
Sbjct: 448 QYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVF 507
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
CK + + ELL +++ G P T ++++ CRA + A + SE+
Sbjct: 508 ALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 122/278 (43%), Gaps = 2/278 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ YN++I ++ +D A +M D C PD TY L+ C++G +D+A
Sbjct: 284 APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYE 343
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L +QM +P+V T+T L+DG C R+ + +LE + R P T +V G
Sbjct: 344 LFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYC 403
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ KA EL+ F R + + N L+ +A L ++ G +S
Sbjct: 404 KSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTS 463
Query: 187 TFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
Y + L ++ + I+RG P +T+ ++ AL KA + + L
Sbjct: 464 VAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLE 523
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
+ K + + V+ +C+ M+ +A E+ E+R
Sbjct: 524 EMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 561
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 120/261 (45%), Gaps = 38/261 (14%)
Query: 280 EMRDRDIAPNLVTFNTLISGHC-------------KDAEV----HKT------------- 309
E+RDR ++P+ V NT+++ C K AE+ H T
Sbjct: 36 EIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARL 95
Query: 310 -RELLVMLLEC---GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
E + +LL+ G P N +I LCRA R AL +M + PP+ +TY
Sbjct: 96 LDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTK 154
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L+ L G + ++++ Q+M + R PD T ++QS C ++++ A + ML G
Sbjct: 155 LVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG 214
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLS-MEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ + +YSAL+ L K R DEA L + + G PD T + +++ L + GR +A
Sbjct: 215 MAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA 274
Query: 485 HDIVK--TSKERGISFKSFPG 503
DI + + I++ S G
Sbjct: 275 VDIFEEMSCAPTAITYNSLIG 295
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 3/222 (1%)
Query: 281 MRDRDIAPNLVTFNTLISG-HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
M D + TF ++ G H H LL + + G PD N+++ LC A
Sbjct: 1 MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
A+ +M E G +T YN LI LC + ++ L M++ ++P N
Sbjct: 61 DTTTAMALFDKMAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
+I CR ++ A + M PD +Y+ L+ L K+GR +A Q M
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSA 178
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
PD+ T +++++L R ++A ++V+ RG++ +
Sbjct: 179 RHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAI 220
>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 627
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/516 (25%), Positives = 219/516 (42%), Gaps = 56/516 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP+ YN++I AL K+ ++D A M PD TYN ++HG C G EA+
Sbjct: 112 ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAI 171
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+K+M G P+V TY L+D C R E ++ + M +R + P+ T +L+ G
Sbjct: 172 VFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGY 231
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ E +L M G P
Sbjct: 232 -----------------------------------ATKGALVEMHGLLDLMVRNGIHPNH 256
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
F V + E + ++G+ P TY +++ L K+GR + Y
Sbjct: 257 YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQ 316
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + L + YN +I C + ++A E+ EM DR I + + FN++I HCK+
Sbjct: 317 MIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGR 376
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR-FEDALDCLSEMVEWG-----VPPN 359
V ++ +L +++ G KPD T + R + F + + M G P N
Sbjct: 377 VIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVN 436
Query: 360 T---------------ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
T TYNI++ LC +LR+FQ + + + TFN +I +
Sbjct: 437 TNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDA 496
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
++ + ++A+ F + + GL P+ ++Y + + +I G +E Q FLSME NGC D
Sbjct: 497 LLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 556
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
S N I+ L+Q+G A + E+ S ++
Sbjct: 557 SGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEA 592
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 141/258 (54%), Gaps = 12/258 (4%)
Query: 245 HVFKD---RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR--DIAPNLVTFNTLISG 299
HVF + R + +V SYN++++ C N A E+ M D D P++V+++T+I+G
Sbjct: 38 HVFDELLRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
K+ ++ K +L+ P+ T+NS+I LC+A + A++ L+ MV+ GV P+
Sbjct: 98 FFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 150
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+TYN ++ C+ G ++ +KM++D + PD+ T+N+L+ C+ + +A K F
Sbjct: 151 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 210
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
SM GL+PD +Y L++ G E M +NG +P+ Y ++++ +Q
Sbjct: 211 SMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 270
Query: 480 RFEEAHDIVKTSKERGIS 497
+ EEA + +++G++
Sbjct: 271 KVEEAMLVFSKMRQQGLN 288
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 129/337 (38%), Gaps = 26/337 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ Y VID L KS ++ A L F+QM + +PD YN LIH +C ++A
Sbjct: 286 GLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKA 345
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +M G + + +ID C RV E ++ ++M V P+ T
Sbjct: 346 EELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT------- 398
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNT--LLYRLSNNSMASEAAAILRKMGDRGYL 182
L RF+ L N + +SN + + G+
Sbjct: 399 -------------LGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASN 445
Query: 183 PESSTFDYTVTCLVTGLDLN----ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
F T ++ GL N + + +K T+ ++++AL K GR+ E
Sbjct: 446 SSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDE 505
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ LV N +Y ++ + +++ ++ M D + N ++
Sbjct: 506 AKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVR 565
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
+ E+ + L M+ E F + T + ID L
Sbjct: 566 ELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLL 602
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 231/479 (48%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ +T N V+ L + + A+ QM+ PD +Y +++ G CRIG +D+
Sbjct: 236 LGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDK 295
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L+LV +++G G P+ Y Y +I C V E ++L M++ V P+ +++
Sbjct: 296 VLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVIS 355
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + + A +L ++ + + ++++ + + EA + +M +G P
Sbjct: 356 GFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEP 415
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ + ++ E + + +++G+ P TY L + L K G + L
Sbjct: 416 DEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELL 475
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + L NV +YN +++ CK+ +++ ++ EM P+ +T+ TL+ +CK
Sbjct: 476 HEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKM 535
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E+ K ELL ++L +P TFN +++ C + ED + M+E G+ PN T+
Sbjct: 536 GEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTF 595
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L++ C ++ + +++ M + PD T+N LI+ C+ +++A M+
Sbjct: 596 NSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVE 655
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G +Y ALI+ K +F EA++ F M ++G + ++ ++ ++G +E
Sbjct: 656 KGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWE 714
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 212/449 (47%), Gaps = 35/449 (7%)
Query: 49 NILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
NI++H +C++G V EA L+ QM G P+V +Y +++ G+C + +V ++++ +K
Sbjct: 246 NIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKG 305
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE 168
+ + P+E + N ++ L N E
Sbjct: 306 KGLKPDE-----------------------------------YIYNNIILLLCKNGEVVE 330
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A +LR M G P++ + ++ +++ C + D ++ + P TY ++
Sbjct: 331 AEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIH 390
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
+ K+G+ VE N + L + +Y +ID +CK M A + +M + + P
Sbjct: 391 GICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTP 450
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
N+VT+ L G CK+ E+ ELL + G +P+ +T+N++++ LC+ E + +
Sbjct: 451 NVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLM 510
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
EM G P+TITY L+ + C +G++A++ L + M R+ P + TFN L+ FC
Sbjct: 511 EEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMS 570
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+E E+ ML G+ P+ ++++L+K + + +M G PDS T
Sbjct: 571 GMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTY 630
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGIS 497
N++++ + +EA + K E+G S
Sbjct: 631 NILIKGHCKARNMKEAWFLHKEMVEKGYS 659
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 145/280 (51%), Gaps = 8/280 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ Y A+ D L K+ ID+A +MS +P+ +TYN +++G+C+IG +++
Sbjct: 447 GLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQT 506
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+++M+ G+ P+ TYT L+D +C +A+ +L IM + + P T L++G
Sbjct: 507 VKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNG 566
Query: 125 VFRCLDPH-KAFELLIRFM-EREPLTQKLVCNTLL--YRLSNNSMASEAAAILRKMGDRG 180
C+ + E LI +M E+ + N+L+ Y + NN A+ I + M DRG
Sbjct: 567 F--CMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRAT--TEIYKAMHDRG 622
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P+S+T++ + ++ E + +++G +TY L+ YK + VE
Sbjct: 623 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEAR 682
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
+ + K LV+ + Y++ +D + + E+C E
Sbjct: 683 KLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDE 722
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 162/384 (42%), Gaps = 37/384 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P +Y VI K ++ A F +M + PD TY +IHGIC+ G + EA
Sbjct: 342 GVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEA 401
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G P+ TYT LIDG+C A + E F V M ++ + PN T +L G
Sbjct: 402 REMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADG 461
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + + A ELL M R+ L + NT++ L + ++ +M G+ P
Sbjct: 462 LCKNGEIDVANELLHE-MSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYP 520
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ T+ + ++ + +L + + ++P T+ +LM +G +G+R +
Sbjct: 521 DTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLI 580
Query: 244 NHVFKDRLVSNV-----------------------------------NSYNMVIDCFCKV 268
+ + ++ N N+YN++I CK
Sbjct: 581 EWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKA 640
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
M A + +EM ++ + T++ LI G K + + R+L + + G +K +
Sbjct: 641 RNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIY 700
Query: 329 NSMIDCLCRAHRFEDALDCLSEMV 352
+ +D +E L+ E +
Sbjct: 701 DIFVDVNYEEGNWEITLELCDEFM 724
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 221/499 (44%), Gaps = 20/499 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP T N +I L S + A F +M V C+P+ F++ IL+ G CR G+ A
Sbjct: 146 GVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRA 205
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+ M G PN Y LI FC R E R++E M+E + P+ T S +
Sbjct: 206 LELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISA 265
Query: 125 V---FRCLDPHKAF-ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + L+ + F ++ I P N +L M EA ++ M G
Sbjct: 266 LCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNG 325
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
L E +++ + LV L E L + +G++P ++ +M+ L K G +
Sbjct: 326 NLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDAR 385
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + + +Y+ ++ C + +A I EM R +PN T N L+
Sbjct: 386 MIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSL 445
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K+ + + +LL + E + D T N +ID LC++ + ++A++ + M W
Sbjct: 446 WKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGM--W------ 497
Query: 361 ITYNILIRSLCAIGDVARSL--RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
I A+G++ S + + PD+ T++ +I C+ ++++A K F
Sbjct: 498 ------IHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKF 551
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M+ L PD+ Y I + K G+ A + ME+ GCN T N ++ L +
Sbjct: 552 IEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSK 611
Query: 479 GRFEEAHDIVKTSKERGIS 497
+ E + ++ KE+GI+
Sbjct: 612 NQIFEIYGLLDDMKEKGIT 630
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 127/503 (25%), Positives = 218/503 (43%), Gaps = 72/503 (14%)
Query: 15 AVIDALVKSNSIDLAYLKFQQM--SVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
A+I L KS DLA+ +FQ V P + YN+++ R VD L K M
Sbjct: 84 ALIRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLYKDMV 143
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G +P YT +LI G C++ R + V + M + PNE + LV G R
Sbjct: 144 VAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSM 203
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A ELL K++ NTL+ EA ++ +M + G P+ TF+ +
Sbjct: 204 RALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRI 263
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+ AL AG+ +E R +F+D +
Sbjct: 264 S-----------------------------------ALCSAGKILEASR----IFRDMQI 284
Query: 253 S--------NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
N+ ++N++++ FCK M++ A + M+ L ++N + G ++
Sbjct: 285 DEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNG 344
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + + L +++ G +P+ ++FN+++D LC+ DA + M+ G+ P+T+TY+
Sbjct: 345 KLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYS 404
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ C+ G V ++ + +M SP+ YT N L+ S + +I +AEK M
Sbjct: 405 TLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNER 464
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG-----------------------C 461
DN + + +I L KSG+ DEA + M +G C
Sbjct: 465 SYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKC 524
Query: 462 NPDSYTSNLILETLVQQGRFEEA 484
PD T ++I+ L + GR +EA
Sbjct: 525 LPDLITYSIIINGLCKAGRLDEA 547
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/526 (24%), Positives = 227/526 (43%), Gaps = 30/526 (5%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G+ P+ +YN +I + + + A ++M D PD T+N I +C G + E
Sbjct: 215 FGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILE 274
Query: 64 ALRLVKQM---EGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
A R+ + M E LG PN+ T+ ++++GFC + E ++E MK +
Sbjct: 275 ASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYN 334
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+ G+ R +A L +++ NT++ L N + S+A I+ M
Sbjct: 335 IWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISS 394
Query: 180 GYLPESSTFDYTV-TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P++ T+ + C TG L IL ++RG P T +L+ +L+K GR E
Sbjct: 395 GIGPDTVTYSTLLHGCCSTGKVLKAN-NILHEMMRRGCSPNTYTCNILLHSLWKEGRIFE 453
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM----------------- 281
++ L + + + + N+VID CK +D A EI M
Sbjct: 454 AEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIG 513
Query: 282 ------RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
+ P+L+T++ +I+G CK + + R+ + ++ PD +++ I
Sbjct: 514 LVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSF 573
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
C+ + A L +M + G + TYN LI L + + L M+ I+P+I
Sbjct: 574 CKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNI 633
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
T+N +I C +I+ A ML G+ P+ S+ LIKA K+ F K+ F
Sbjct: 634 CTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVF-E 692
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ + C +L+ L+ G EA ++ + +R +F
Sbjct: 693 IALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNF 738
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 178/408 (43%), Gaps = 30/408 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P T Y+ ++ + + A +M C P+ +T NIL+H + + G + EA
Sbjct: 395 GIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEA 454
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM------------------ 106
+L+++M Y + T I+IDG C + ++ E ++E M
Sbjct: 455 EKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGL 514
Query: 107 -----KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
+ P+ T +++G+ + +A + I + + ++ +T ++
Sbjct: 515 VDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFC 574
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
+ S A +L+ M RG T++ + L + + E G+LD ++G+ P
Sbjct: 575 KHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNIC 634
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN---MMDRATEIC 278
TY ++ L + GR + L+ + + + N++S+ ++I FCK + ++ EI
Sbjct: 635 TYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIA 694
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
+ A + FN L+ G EV + +EL L+ F F +N +I+ LC+
Sbjct: 695 LSICGHKEALYSLMFNELLIG----GEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKD 750
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
E+A D L +M++ G + ++ +I L G + L ++M
Sbjct: 751 EMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERM 798
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 175/391 (44%), Gaps = 37/391 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP+T N ++ +L K I A Q+M+ D T NI+I G+C+ G +DEA
Sbjct: 430 GCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEA 489
Query: 65 LRLVKQMEGLGYA-----------------------PNVYTYTILIDGFCNAKRVAEVFR 101
+ +V+ M G A P++ TY+I+I+G C A R+ E +
Sbjct: 490 VEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARK 549
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL-VCNTLLYRL 160
M +++ P+ + +H + AF +L + ME+ + L N+L+ L
Sbjct: 550 KFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVL-KDMEKRGCNKSLQTYNSLILGL 608
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
+ + E +L M ++G P T++ ++CL G + + +LD +++G+ P
Sbjct: 609 GSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNI 668
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLV---SNVNSYNMVIDCFCKVNMMDRATEI 277
S++ LL++A KA + VF+ L Y+++ + + A E+
Sbjct: 669 SSFRLLIKAFCKA----SDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKEL 724
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
DR +N LI CKD + ++L +++ G++ D +F +ID L +
Sbjct: 725 FDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGK 784
Query: 338 AHRFEDALDCLSE----MVEWGVPPNTITYN 364
+ DA D L+E M G+ N IT N
Sbjct: 785 RGKKHDA-DELAERMMDMASEGMVENKITRN 814
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLS----EMVEWGVPPNTITYNILIRSLCAIGDVAR 378
P + +N +++ R ED +D S +MV GV P T T N+LI LC G
Sbjct: 114 PPVYLYNMVLESSLR----EDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFED 169
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+ +F KM P+ ++F L++ +CR +A + M + G++P+ Y+ LI
Sbjct: 170 AREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLIS 229
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+ + GR +EA++ M ++G PD T N + L G+ EA I +
Sbjct: 230 SFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFR 280
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 222/475 (46%), Gaps = 41/475 (8%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVD---QCKPDRFTYNILIHGICRIGVVDEAL 65
+ R +N+V++ +++ A L+F + V P+ ++N++I +C++G+VD A+
Sbjct: 150 TVRSFNSVLNVIIQEGLFHRA-LEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAI 208
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ ++M P+V+TY L+DG C R+ E +L+ M+ P+ T L++G+
Sbjct: 209 EVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGL 268
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ D ++R KLV N L +G +P
Sbjct: 269 CKKGD-------MVR-------VTKLVDNMFL---------------------KGCVPNE 293
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + L L++ +LD + P TY L+ L K GR V+G L+
Sbjct: 294 VTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSS 353
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + +N +Y+ +I K + A + ++M ++ PN+V ++ LI G C++ +
Sbjct: 354 LEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGK 413
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + +E+L ++ G P+ FT++S+I + + A+ EM + PN I Y++
Sbjct: 414 LDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSV 473
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL- 424
LI LC G + ++ ++ M + PD+ ++++I C +E K F ML
Sbjct: 474 LIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQE 533
Query: 425 -GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+PD +Y+ L++AL K A SM GCNPD T N+ L L ++
Sbjct: 534 SDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREK 588
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 201/463 (43%), Gaps = 45/463 (9%)
Query: 40 QCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG--LGYAPNVYTYTILIDGFCN---AK 94
QC+ ++N +++ I + G+ AL + G +PNV ++ ++I C
Sbjct: 146 QCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVD 205
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCN 154
R EVFR + I K P+ T +L+ G
Sbjct: 206 RAIEVFREMAIQKCE---PDVFTYCTLMDG------------------------------ 232
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
L EA +L +M G P S TF+ + L D+ ++D +
Sbjct: 233 -----LCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLK 287
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G P TY ++ L G+ + L+ + + V N +Y +I+ K
Sbjct: 288 GCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDG 347
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ + +R N ++TLISG K+ + + L ++E G +P+ ++++ID
Sbjct: 348 VHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDG 407
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LCR + ++A + L EMV G PN TY+ LI+ G+ +++R++++M + P+
Sbjct: 408 LCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPN 467
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
++ LI C K+ +A + ML GLRPD +YS++I L +G + + F
Sbjct: 468 EICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFN 527
Query: 455 SM--EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
M +++ PD T N++L L +Q A D++ + +RG
Sbjct: 528 EMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRG 570
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 212/490 (43%), Gaps = 16/490 (3%)
Query: 2 SFLGISPS----TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICR 57
S G+ PS TRL + A + S++I L ++S+ +C P R + + R
Sbjct: 7 SCFGVFPSDFGLTRLSSG---AALFSSAIPFLLLLLLKLSISECPPRR------VVSVSR 57
Query: 58 IGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
+ E + Y T+ LI+ + N+ +F+V + MK E
Sbjct: 58 SFLQSETYIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKN 117
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILR-- 174
+ + P KA EL R ++ + + N++L + + A
Sbjct: 118 FILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECG 177
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
G P +F+ + + ++ + + +P TY LM+ L K
Sbjct: 178 VGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKED 237
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
R E L+ + + + ++N++I+ CK M R T++ M + PN VT+N
Sbjct: 238 RIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYN 297
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
T+I+G C ++ K LL ++ P+ T+ ++I+ L + R D + LS + E
Sbjct: 298 TIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEER 357
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G N Y+ LI L ++ L++KM P+I ++ALI CR K+++A
Sbjct: 358 GHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEA 417
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
++ M+ G P+ F+YS+LIK K+G +A + + M +N C P+ ++++
Sbjct: 418 KEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHG 477
Query: 475 LVQQGRFEEA 484
L + G+ EA
Sbjct: 478 LCEDGKLREA 487
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 126/254 (49%)
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K + NV S+N+VI CK+ ++DRA E+ REM + P++ T+ TL+ G CK+ +
Sbjct: 181 KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRID 240
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ LL + G P TFN +I+ LC+ + M G PN +TYN +I
Sbjct: 241 EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 300
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G + +++ L +M A + P+ T+ LI + + S+ G
Sbjct: 301 NGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHH 360
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+ ++YS LI L K + +EA + M + GC P+ + +++ L ++G+ +EA +I
Sbjct: 361 ANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEI 420
Query: 488 VKTSKERGISFKSF 501
+ +G + +F
Sbjct: 421 LCEMVNKGCTPNAF 434
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 152/370 (41%), Gaps = 18/370 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN +I+ L +D A +M +C P+ TY LI+G+ + G +
Sbjct: 288 GCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDG 347
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +E G+ N Y Y+ LI G ++ E + + M E+ PN +L+ G
Sbjct: 348 VHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDG 407
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R +A E+L + + ++L+ + +A + ++M +P
Sbjct: 408 LCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPN 467
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + L L E + + RG++P Y ++ L AG G + N
Sbjct: 468 EICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFN 527
Query: 245 HVFKDRLVS--NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG-HC 301
+ S +V +YN+++ CK N + A ++ M DR P+L+T N ++
Sbjct: 528 EMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALRE 587
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K RE L + ++ L + R A + M++ +PPN
Sbjct: 588 KLNPPQDGREFL---------------DELVVRLHKRQRIVGAAKIIEVMLQKFLPPNAS 632
Query: 362 TYNILIRSLC 371
T+ +I LC
Sbjct: 633 TWERIIPELC 642
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 125/297 (42%), Gaps = 16/297 (5%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y+ +I L K + A +++M C+P+ Y+ LI G+CR G +DEA ++ +M
Sbjct: 366 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 425
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G PN +TY+ LI GF + RV + M + N PNE L+HG+
Sbjct: 426 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLR 485
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM--GDRGYLPESSTFDY 190
+A + + R + +++++ L N + +M + P+ T++
Sbjct: 486 EAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNI 545
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L ++ +L++ + RG P T + + AL + + R F D
Sbjct: 546 LLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGRE----FLDE 601
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
LV ++ ++ A +I M + + PN T+ +I CK +V
Sbjct: 602 LVVRLHKRQRIVG----------AAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 648
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 201/434 (46%), Gaps = 1/434 (0%)
Query: 36 MSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR 95
M++ + P T+N + G + G +++ + + M GY Y ILI C
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT 155
E +++L M+ + ++++ + + +A EL I M R L
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEAREL-IEKMARYAPPDALTYGP 119
Query: 156 LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRG 215
++ RL +A A + +M RG P++ +++ ++ L + E + + +K+
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179
Query: 216 VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT 275
+ P TY L+ L KA R + V SYN +ID FCK + A
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
++ +M + PN+VT+ TLI G K +V E+L +++ G P+ T++ +ID
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
C+ R ++A L +MV G+ P +TYNIL+ SLC + + +LF+ M R P +
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
T+N L+++ C +++ A + + M+ G PD +Y L L ++G+ EA++
Sbjct: 360 VTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEK 419
Query: 456 MEQNGCNPDSYTSN 469
M+ NP +S
Sbjct: 420 MKLTKRNPFGRSSQ 433
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 204/420 (48%), Gaps = 11/420 (2%)
Query: 78 PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF-RCL----DPH 132
P T+ + DGF A R+ +V V + M E T+R+ +G+ CL +
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGY-----TLRASGYGILISCLCKVGNFD 62
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A++LL + + + +T++ L + EA ++ KM R P++ T+ V
Sbjct: 63 EAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGPIV 121
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L +++ ++ RG+KP Y ++ L + + E + K R+
Sbjct: 122 ERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRIN 181
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
NV +YN +I+ CK ++ A E+ +EM + P V++NTLI G CK ++ +++
Sbjct: 182 PNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDV 241
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
++ P+ T+ ++ID L ++ + + A + L MV+ GV PN TY+ LI C
Sbjct: 242 FDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCK 301
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
+ V + +L ++M I+P + T+N L+ S CR +K+E A K F M P +
Sbjct: 302 VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVT 361
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y+ L++AL + D A + + M GC PD+ T + + L + G+ EA ++++ K
Sbjct: 362 YNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 182/382 (47%), Gaps = 3/382 (0%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y +I L K + D AY M + + K Y+ +I+ +C++ V+EA L+++M
Sbjct: 48 YGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA 107
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
P+ TY +++ C KR+ + +E M R + P+ ++ G+ +
Sbjct: 108 RYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVE 166
Query: 133 KAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
+A LL M ++ + +V NTL+ L A + ++M +GY+P +++
Sbjct: 167 EA-RLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTL 225
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ DL + D ++ P TY L++ L K+G+ L+ + K +
Sbjct: 226 IDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 285
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
NV +Y+ +ID FCKV +D A ++ +M + IAP +VT+N L++ C+ ++ +
Sbjct: 286 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFK 345
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
L + + P T+N+++ LC + + A +EM+ G PP+ ITY+ L L
Sbjct: 346 LFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLT 405
Query: 372 AIGDVARSLRLFQKMQADRISP 393
G V + L +KM+ + +P
Sbjct: 406 RAGKVHEAQELMEKMKLTKRNP 427
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 155/341 (45%), Gaps = 1/341 (0%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
NT+ + + + + M + GY +S + ++CL + +E +L T
Sbjct: 14 NTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRL 73
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
+ K + Y ++ L K R VE R L + +Y +++ CK +D
Sbjct: 74 KRFKRKAIAYSTIINWLCKLNR-VEEARELIEKMARYAPPDALTYGPIVERLCKTKRIDD 132
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A EM R I P+ +N ++SG C++ +V + R L +++ P+ T+N++I+
Sbjct: 133 ALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLIN 192
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
LC+A R E A + EM G P ++YN LI C D+ + +F KM P
Sbjct: 193 GLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVP 252
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
++ T+ LI + K++ A + M+ G+ P+ +YS LI K R DEA +
Sbjct: 253 NVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLL 312
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
M G P T N++L +L + + E+A + + +R
Sbjct: 313 EQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQR 353
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 150/322 (46%), Gaps = 1/322 (0%)
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
M R +P ++TF+ L + + ++ G R S Y +L+ L K G
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
E + L+ + R +Y+ +I+ CK+N ++ A E+ +M R P+ +T+
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGP 119
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
++ CK + + + G KPD F +N ++ LC+ + E+A +MV+
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ PN +TYN LI LC + + LF++M P ++N LI FC+ + A+
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
F M+ P+ +Y+ LI L KSG+ A + M + G P+ T + +++
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299
Query: 476 VQQGRFEEAHDIVKTSKERGIS 497
+ R +EAH +++ +GI+
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIA 321
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 149/310 (48%), Gaps = 8/310 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P Y +++ L K+ ID A ++M+ KPD F YN ++ G+C+ V+EA L
Sbjct: 112 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 171
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++M PNV TY LI+G C A R+ + + + M + P E + +L+ G +
Sbjct: 172 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 231
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D A ++ + + + + TL+ LS + AA +L M +G P +T
Sbjct: 232 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 291
Query: 188 FDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ +CL+ G ++E +L+ + +G+ P TY +L+ +L +A + + +
Sbjct: 292 Y----SCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLF 347
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + R V +YN ++ C +D A + EM + P+ +T++TL G +
Sbjct: 348 RGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRA 407
Query: 304 AEVHKTRELL 313
+VH+ +EL+
Sbjct: 408 GKVHEAQELM 417
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 109/266 (40%), Gaps = 35/266 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +YN V+ L + ++ A L F++M + P+ TYN LI+G+C+ ++ A
Sbjct: 144 GIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETA 203
Query: 65 LRLVKQMEGLGYAP-----------------------------------NVYTYTILIDG 89
L K+M G GY P NV TYT LIDG
Sbjct: 204 YELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDG 263
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
+ +V VL+ M ++ V PN AT L+ G + +A +LL + + +
Sbjct: 264 LSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPT 323
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ N LL L +A + R M R P T++ + L L+ +
Sbjct: 324 VVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYA 383
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGR 235
I +G P TY L L +AG+
Sbjct: 384 EMIAKGCPPDAITYDTLAWGLTRAGK 409
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ Y+ +ID K +D A+ +QM P TYNIL++ +CR +++A
Sbjct: 284 GVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDA 343
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L + M P V TY L+ C+ K++ R+ M + P+ T +L G
Sbjct: 344 FKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWG 403
Query: 125 VFRCLDPHKAFELL--IRFMEREPL 147
+ R H+A EL+ ++ +R P
Sbjct: 404 LTRAGKVHEAQELMEKMKLTKRNPF 428
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 1/146 (0%)
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
V P T+N + G + + ++Q M + + LI C++ ++A
Sbjct: 6 VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
K +M + +YS +I L K R +EA++ M + PD+ T I+E L
Sbjct: 66 KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERL 124
Query: 476 VQQGRFEEAHDIVKTSKERGISFKSF 501
+ R ++A V+ RGI +F
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAF 150
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 200/438 (45%), Gaps = 37/438 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN +I AL K ID A F++M + C PD FTY+ L++G+C+ VDEA
Sbjct: 193 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 252
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M+ G PN T+ +LID ++ ++++ M + PNE T +L+HG
Sbjct: 253 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 312
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ CL +A ++L KM +P
Sbjct: 313 L--CL---------------------------------KGKLDKALSLLEKMVSSKCVPN 337
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + LV + IL + +RG K Y L+ L+K G+ R
Sbjct: 338 QVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWK 397
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + NV Y ID C+ D A +I +EM + PN T+++L+ G K
Sbjct: 398 EMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKG 457
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ K + ++ + + + +++ LC + R +AL + M+ G+ P+ + Y+
Sbjct: 458 DSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYS 517
Query: 365 ILIRSLCAIGDVARSLRLFQKMQAD--RISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+I+ LC +G V + L+LF +MQ + PD+ T+N L + CR + + +A SML
Sbjct: 518 SMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSML 577
Query: 423 TLGLRPDNFSYSALIKAL 440
G PD+ + + ++ L
Sbjct: 578 DEGCDPDSLTCNIFLETL 595
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/475 (23%), Positives = 217/475 (45%), Gaps = 40/475 (8%)
Query: 9 STRLYNAVIDALVKSNSIDLA---YLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ + +N+V++ +++ A YL + +P+ TYN++I +C++G +D A+
Sbjct: 159 TVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAV 218
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
++M P+V+TY+ L++G C +RV E +L+ M+ PN T L+ +
Sbjct: 219 DTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDAL 278
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ D +A +L+ + + ++ NTL++ L +A ++L KM +P
Sbjct: 279 SKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQ 338
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + LV + IL + +RG K Y L+ L+K G+
Sbjct: 339 VTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKS--------- 389
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ A + +EM ++ PN+V + I G C+D +
Sbjct: 390 --------------------------ENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 423
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ ++L +L GF P+ FT++S++ + + A+ EM+ + N + ++
Sbjct: 424 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 483
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM--LT 423
L+ LC G + +L ++ M + + PD+ ++++I+ C + ++K K F+ M
Sbjct: 484 LLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQE 543
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
RPD +Y+ L AL + A SM GC+PDS T N+ LETL ++
Sbjct: 544 PKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRER 598
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 189/431 (43%), Gaps = 23/431 (5%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P Y+ +++ L K +D A +M + C P+ T+N+LI + + G + A +
Sbjct: 230 NPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAK 289
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
LV M G PN TY LI G C ++ + +LE M PN+ T ++++G+
Sbjct: 290 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLV 349
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ +L+ ER + + ++L+ L + A + ++M ++G P
Sbjct: 350 KQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVV 409
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ + L +E IL + +G P TY LM+ +K G + +
Sbjct: 410 VYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEM 469
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ NV +++++ C+ + A + M + P++V ++++I G C V
Sbjct: 470 MSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSV 529
Query: 307 HKTRELLVML--LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
K +L + E +PD T+N + + LCR A+D L+ M++ G P+++T N
Sbjct: 530 DKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCN 589
Query: 365 ILIRSLCAIGDVARSLRLF------------QKMQADRI---------SPDIYTFNALIQ 403
I + +L + + RLF +K+ A RI P+ T++ +IQ
Sbjct: 590 IFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQ 649
Query: 404 SFCRMNKIEKA 414
C+ +I +
Sbjct: 650 RTCKPKRIRET 660
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 8/272 (2%)
Query: 238 EGD-----RYLNHVF---KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
EGD ++ HVF N+ +YN++I CK+ +DRA + REM ++ P+
Sbjct: 173 EGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPD 232
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+ T++TL++G CK+ V + LL + G P+ TFN +ID L + A +
Sbjct: 233 VFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVD 292
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
M G PN +TYN LI LC G + ++L L +KM + + P+ T+ +I +
Sbjct: 293 NMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQR 352
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
+ E SM G + + + YS+LI L K G+ + A + + M + GC P+
Sbjct: 353 RAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYG 412
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
++ L + + +EA DI++ +G +F
Sbjct: 413 AFIDGLCRDEKPDEAEDILQEMLSKGFLPNAF 444
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 144/309 (46%), Gaps = 6/309 (1%)
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK---PRFSTYLLLMEALYKAGR 235
+G+ P T++ + L L + +DTF + +K P TY LM L K R
Sbjct: 192 KGFQPNLLTYNLIIKALCK---LGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERR 248
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
E L+ + + + N ++N++ID K + RA ++ M + PN VT+NT
Sbjct: 249 VDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNT 308
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
LI G C ++ K LL ++ P++ T+ ++I+ L + R ED + L M E G
Sbjct: 309 LIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERG 368
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
N Y+ LI L G ++RL+++M P++ + A I CR K ++AE
Sbjct: 369 QKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAE 428
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
ML+ G P+ F+YS+L+K K G +A + M + +++L L
Sbjct: 429 DILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGL 488
Query: 476 VQQGRFEEA 484
+ GR EA
Sbjct: 489 CESGRLREA 497
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 161/382 (42%), Gaps = 37/382 (9%)
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
L N ++ L A R+M + P+ T+ + L ++E +LD
Sbjct: 199 LTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDE 258
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
G P T+ +L++AL K G + ++++F V N +YN +I C
Sbjct: 259 MQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 318
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+D+A + +M PN VT+ T+I+G K +L+ + E G K +++ ++S
Sbjct: 319 LDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSS 378
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I L + + E+A+ EM E G PN + Y I LC + + Q+M +
Sbjct: 379 LISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG 438
Query: 391 ISPDIYTFNALIQSF-----------------------------------CRMNKIEKAE 415
P+ +T+++L++ F C ++ +A
Sbjct: 439 FLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREAL 498
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM--EQNGCNPDSYTSNLILE 473
+ ML GL+PD +YS++IK L G D+ + F M ++ PD T N++
Sbjct: 499 TVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFN 558
Query: 474 TLVQQGRFEEAHDIVKTSKERG 495
L +Q A D++ + + G
Sbjct: 559 ALCRQDNLTRAIDLLNSMLDEG 580
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 5/130 (3%)
Query: 360 TITYNILIRSLCAIGDV-ARSLRLFQKMQAD-RISPDIYTFNALIQSFCRMNKIEKAEKA 417
T T ILI C + ++ F +M D + +FN+++ + A K
Sbjct: 123 TETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKF 182
Query: 418 F---FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
+ F + G +P+ +Y+ +IKAL K G+ D A TF M CNPD +T + ++
Sbjct: 183 YLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNG 242
Query: 475 LVQQGRFEEA 484
L ++ R +EA
Sbjct: 243 LCKERRVDEA 252
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 212/472 (44%), Gaps = 7/472 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN +I AL +++ +D A +MS C PD ++ ++ G+C++G V+EA
Sbjct: 152 GVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA 211
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + P +Y ++ C R+ EVF V+ M +R + PN T ++V
Sbjct: 212 RGFLAET-----VPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDA 266
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A +L R + L L+ + +A ++ M D G+ P
Sbjct: 267 FCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPS 326
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL- 243
+ +++ + L DL ++ + + P +TY L++ AG D++G +
Sbjct: 327 TISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAG-DLDGAMLIW 385
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + NV Y +ID CK M D+A + +M + PN VTFNTLI C
Sbjct: 386 NEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDC 445
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V + + + G P+ T+N ++ L R +DA + EM+ G + +TY
Sbjct: 446 GRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTY 505
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N +I LC + ++ L +M I PD +TFNA+I ++C+ K+ A M
Sbjct: 506 NTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNA 565
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ + +Y+ LI L G+ A L M G P+ T N+++ +
Sbjct: 566 VNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 617
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 207/481 (43%), Gaps = 6/481 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCK-PDRFTYNILIHGICRIGVVDE 63
G++ + A I A ++ S D A F + S C+ P YN L+ + R +V
Sbjct: 81 GVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGA 140
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ + M G PNVYTY +LI C RV ++L+ M + P+E + ++V
Sbjct: 141 VVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVS 200
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +A L E P+ N +++ L E +++ +M RG P
Sbjct: 201 GMCKLGRVEEARGFLA---ETVPVQASY--NAVVHALCGEFRMWEVFSVVNEMVQRGLQP 255
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ V +L C IL + G P T+ L++ ++ G+ +
Sbjct: 256 NVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMW 315
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + + SYN++I C + + A + M+ + PN T++TL+ G
Sbjct: 316 HWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNA 375
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + + G KP+ + +MID LC+ F+ A + +M+ PPNT+T+
Sbjct: 376 GDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTF 435
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI LC G V R+L +F M+ + P+ T+N L+ R + A ML
Sbjct: 436 NTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLN 495
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G +Y+ +I L + A M G PD++T N I+ ++G+
Sbjct: 496 NGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSI 555
Query: 484 A 484
A
Sbjct: 556 A 556
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 197/487 (40%), Gaps = 45/487 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD--QCKPDRFTYNILIHGICRIGVVD 62
G S R + A + L + +D Q+M + C D I R G D
Sbjct: 46 GSGDSARHHEATVRRLAAAGDVDGVQYALQEMRLRGVACTEDALV--AAIGAFARAGSAD 103
Query: 63 EALRLVKQMEGLG-YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
AL+ + LG P V Y L+D V V V + M++ V PN T
Sbjct: 104 RALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYT---- 159
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ LLIR L N A +L +M +G
Sbjct: 160 -------------YNLLIR------------------ALCQNDRVDAARKMLDEMSRKGC 188
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P+ + V+ + + E G L + P ++Y ++ AL R E
Sbjct: 189 HPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEFRMWEVFS 243
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+N + + L NV +Y ++D FCK + A I M PN++TF L+ G
Sbjct: 244 VVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFF 303
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+D +VH + +++ G+ P ++N +I LC + ALD + M + PN
Sbjct: 304 EDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNAT 363
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY+ L+ GD+ ++ ++ +M++ P++ + +I C+ ++AE M
Sbjct: 364 TYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKM 423
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
L P+ +++ LI L GR A F M +NGC+P+ T N +L L ++G
Sbjct: 424 LMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNH 483
Query: 482 EEAHDIV 488
++A +V
Sbjct: 484 KDAFAMV 490
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 176/406 (43%), Gaps = 10/406 (2%)
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME---REPLTQ 149
A V V L+ M+ R V E + + + R +A + R + R+P +
Sbjct: 64 AGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVR 123
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
V N LL L +M + M G P T++ + L ++ +LD
Sbjct: 124 --VYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLD 181
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
++G P ++ ++ + K GR E +L V SYN V+ C
Sbjct: 182 EMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET-----VPVQASYNAVVHALCGEF 236
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
M + EM R + PN+VT+ T++ CK E+ +L ++ G P+ TF
Sbjct: 237 RMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFT 296
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+++ + DAL MV+ G P+TI+YN+LIR LC IGD+ +L F M+ +
Sbjct: 297 ALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRN 356
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ P+ T++ L+ F ++ A + M + G +P+ Y+ +I L K FD+A
Sbjct: 357 ALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQA 416
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ M + C P++ T N ++ L GR A ++ + G
Sbjct: 417 ESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG 462
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 164/386 (42%), Gaps = 2/386 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y ++DA K+ + +A +M C P+ T+ L+ G G V +A
Sbjct: 252 GLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDA 311
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + M G+AP+ +Y +LI G C + MK + PN T +LV G
Sbjct: 312 LSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDG 371
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
D A + +V ++ L M +A +++ KM P
Sbjct: 372 FSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPN 431
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ TF+ + L + + + G P TY L+ L++ G + +
Sbjct: 432 TVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVI 491
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++ +YN VI+C C++ M A + M + I P+ TFN +I +CK+
Sbjct: 492 EMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEG 551
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V LL + + + +I LC + +A+ L +M+ G+ PN T+N
Sbjct: 552 KVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWN 611
Query: 365 ILIRSL-CAIGDVARSLRLFQKMQAD 389
+L+R++ IG + + LF+ + D
Sbjct: 612 VLVRAIFTNIGTIG-PIHLFKYIVED 636
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 147/338 (43%), Gaps = 12/338 (3%)
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
N + ++ + R D G + + TV L D++ L RGV
Sbjct: 29 NKIPADPSRTERPRPDPGSGDSARHHEATVRRLAAAGDVDGVQYALQEMRLRGVACTEDA 88
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVS----NVNSYNMVIDCFCKVNMMDRATEIC 278
+ + A +AG DR L ++ + V YN ++D + NM+ +
Sbjct: 89 LVAAIGAFARAG---SADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVY 145
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
MR + PN+ T+N LI C++ V R++L + G PD+ + +++ +C+
Sbjct: 146 DNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKL 205
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
R E+A L+E V P +YN ++ +LC + + +M + P++ T+
Sbjct: 206 GRVEEARGFLAETV-----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTY 260
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
++ +FC+ ++ A M+++G P+ +++AL+K + G+ +A + M
Sbjct: 261 TTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVD 320
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G P + + N+++ L G + A D + K +
Sbjct: 321 EGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNAL 358
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 223/499 (44%), Gaps = 16/499 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLA---YLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
G P R YN++++AL++SN D A +L F+ M + P+ TYNILI CR
Sbjct: 108 FGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLS---PNLQTYNILIKISCRKKQ 164
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
D+A L+ M G++P+V++Y LI+ +++ ++ + M ER V P+ A
Sbjct: 165 FDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNI 224
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDR 179
L+ G F+ D A E+ R ++ + + N ++ L E+ I +M
Sbjct: 225 LIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKN 284
Query: 180 GYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
E YT + L+ GL +L+ + + GV P Y ++ +AGR
Sbjct: 285 ----ERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 340
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
+E L V + V SYN++I + +D A I + ++D + +T+
Sbjct: 341 -IEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGV 399
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
L+ G CK+ ++K +L D F ++SMI+ LCR R ++ L +M + G
Sbjct: 400 LVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 459
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
PN N +I + +LR F M + P + T+N LI + + +A
Sbjct: 460 CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAY 519
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
ML G +P+ +YS L+ L + + D A + + G PD N+I+ L
Sbjct: 520 ALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGL 579
Query: 476 VQQGRFEEAHDIVKTSKER 494
G+ E+A + K+R
Sbjct: 580 CSSGKVEDALQLYSEMKQR 598
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 224/485 (46%), Gaps = 2/485 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP+ + YN +I + D A M PD F+Y LI+ + + G + +
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSD 202
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE-IMKERNVCPNEATVRSLV 122
AL+L +M G P+V Y ILIDGF + + E ++K +V PN + ++
Sbjct: 203 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 262
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G+ +C ++FE+ R + E +TL++ L + A + ++M + G
Sbjct: 263 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ ++ + + + E + K G + S Y +L+ L++ + E
Sbjct: 323 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS-YNILIRGLFENAKVDEAISI 381
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + ++ +Y +++ CK +++A I E + + ++++I+G C+
Sbjct: 382 WELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCR 441
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + +L + + G KP+ N++I+ RA + EDAL MV G P +T
Sbjct: 442 EGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVT 501
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN LI L + + L ++M P++ T++ L+ C+ K++ A + L
Sbjct: 502 YNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQAL 561
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G +PD ++ +I L SG+ ++A Q + M+Q C P+ T N ++E + FE
Sbjct: 562 EKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFE 621
Query: 483 EAHDI 487
A I
Sbjct: 622 RASKI 626
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 206/420 (49%), Gaps = 4/420 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKPDRFTYNILIHGICRIGVVDE 63
G++P YN +ID K I A ++++ P+ +YN++I+G+C+ G DE
Sbjct: 214 GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDE 273
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ + +M+ ++YTY+ LI G C + + RV + M E V P+ ++++
Sbjct: 274 SFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLN 333
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G R + EL + ME+E + N L+ L N+ EA +I + ++
Sbjct: 334 GYLRAGRIEECLELW-KVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCA 392
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIK-RGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+S T+ V L LN+ IL+ RG F+ Y ++ L + GR E
Sbjct: 393 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFA-YSSMINGLCREGRLDEVAGV 451
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L+ + K N + N VI+ F + + ++ A M + P +VT+NTLI+G K
Sbjct: 452 LDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSK 511
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ L+ +L G+KP+ T++ +++ LC+ + + AL+ + +E G P+
Sbjct: 512 AERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKM 571
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+NI+I LC+ G V +L+L+ +M+ + P++ T N L++ F ++ E+A K + +L
Sbjct: 572 HNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHIL 631
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 190/404 (47%), Gaps = 11/404 (2%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ YN +I+ L K D ++ + +M ++ D +TY+ LIHG+C G +D A
Sbjct: 251 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGAT 310
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
R+ K+M G +P+V Y +++G+ A R+ E + ++M E+ C + L+ G+
Sbjct: 311 RVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM-EKEGCRTVVSYNILIRGL 369
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD-RGYLPE 184
F +A + E++ + L++ L N ++A +IL + + RG L
Sbjct: 370 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL-- 427
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
TF Y+ ++ GL L+E G+LD K G KP ++ +A + +
Sbjct: 428 -DTFAYS--SMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDAL 484
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
R+ ++ V +YN +I+ K A + +EM + PN++T++ L++G
Sbjct: 485 RFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGL 544
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ ++ L LE GFKPD N +I LC + + EDAL SEM + PN
Sbjct: 545 CQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNL 604
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
+T+N L+ + D R+ +++ + S + Y Q
Sbjct: 605 VTHNTLMEGFYKVRDFERASKIWDHILQSWSSSNCYYMEHTCQG 648
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 120/516 (23%), Positives = 212/516 (41%), Gaps = 71/516 (13%)
Query: 16 VIDALVKSNSIDLAYLKFQQM-SVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGL 74
VI A K++ D A FQ+M + C+P +YN L++ + DEA E +
Sbjct: 84 VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
G +PN+ TY ILI C K+ + +L M E+ P+ VF
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPD----------VFSY------ 187
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
TL+ L+ N S+A + +M +RG P+ + ++ +
Sbjct: 188 -------------------GTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDG 228
Query: 195 LVTGLDLNETCGILDTFIKR-GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
D+ I + +K V P +Y +++ L K G+ E + + K+
Sbjct: 229 FFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ 288
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV---------------------- 291
++ +Y+ +I C +D AT + +EM + ++P++V
Sbjct: 289 DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW 348
Query: 292 ------------TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
++N LI G ++A+V + + +L E D T+ ++ LC+
Sbjct: 349 KVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNG 408
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
AL L E +T Y+ +I LC G + + +M P+ + N
Sbjct: 409 YLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCN 468
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
A+I F R +K+E A + F +M++ G P +Y+ LI L K+ RF EA M
Sbjct: 469 AVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHK 528
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G P+ T +L++ L Q + + A ++ + E+G
Sbjct: 529 GWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG 564
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 120/239 (50%), Gaps = 2/239 (0%)
Query: 261 VIDCFCKVNMMDRATEICREMRD-RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
VI + K +M D+A +I + M + P + ++N+L++ + + + +
Sbjct: 84 VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G P+ T+N +I CR +F+ A + L+ M E G P+ +Y LI SL G ++ +
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT-LGLRPDNFSYSALIK 438
L+LF +M ++PD+ +N LI F + I A + + +L + P+ SY+ +I
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
L K G+FDE+ + + M++N D YT + ++ L G + A + K E G+S
Sbjct: 264 GLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/481 (26%), Positives = 221/481 (45%), Gaps = 37/481 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS R N+++ LV++ A L ++QM PD F+Y I+++ C+ G VDEA
Sbjct: 216 GRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEA 275
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
VK+ME PNV TY LIDG+ + V +VL +M E+ + N T L+ G
Sbjct: 276 FNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKG 335
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQK---------------------------------- 150
+ +A +L+ ME+ +
Sbjct: 336 YCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMN 395
Query: 151 -LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
++CN+L+ ++AA +L M D P+S ++ + D + + D
Sbjct: 396 TVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCD 455
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+GV TY L++ L+ G N + K + N +Y ++D F KV
Sbjct: 456 EMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVG 515
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
DRA I ++ + ++ +NT+I G CK ++ + +E+ + + E GF PD+ T+
Sbjct: 516 TFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYR 575
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEW-GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
++ID C+ +AL L +M E G+ +T YN LI + ++ + L +M+
Sbjct: 576 TLIDGYCKVGNLVEALK-LKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKN 634
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+SP++ T+ +LI +C ++KA A+F M+ G+ P+ S ++ +L + G+ DE
Sbjct: 635 RELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDE 694
Query: 449 A 449
A
Sbjct: 695 A 695
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 137/562 (24%), Positives = 223/562 (39%), Gaps = 70/562 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI ++R Y +I K ++ A M D Y +LIH C G VD+A
Sbjct: 321 GIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDA 380
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LR+ M +G N LI+G+C V + VL MK+ N+ P+ +L+ G
Sbjct: 381 LRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDG 440
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D KAF+L + + NTLL L + A I M RG P
Sbjct: 441 FCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPN 500
Query: 185 S-------------STFDYTVTCLVTGLDLNET----------CGIL---------DTFI 212
TFD + L T CG + F+
Sbjct: 501 EVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFL 560
Query: 213 KR---GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
K G P TY L++ K G VE + + +D + S+ YN +I +
Sbjct: 561 KMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSE 620
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+ + + EM++R+++PN+VT+ +LI+G C + K +++ G P+ +
Sbjct: 621 ELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGS 680
Query: 330 SMIDCLCRAHRFEDALDCLSEMVE----------------------------------WG 355
++ L R + ++A L ++ +
Sbjct: 681 KIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMS 740
Query: 356 VP-PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
+P N I YNI I LC ++ R+ + PD YT+ +LI + + K+ +A
Sbjct: 741 IPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEA 800
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
M+ GL P+ Y+ALI L KSG D A++ F + + G +P T N +++
Sbjct: 801 FCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDG 860
Query: 475 LVQQGRFEEAHDIVKTSKERGI 496
+ GR EA ++ +E GI
Sbjct: 861 YCKGGRTTEALELKDKMREEGI 882
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/496 (23%), Positives = 220/496 (44%), Gaps = 45/496 (9%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
S S +++ ++ + A F M P + N L+ + + G +AL
Sbjct: 183 SFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALL 242
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVHGV 125
+ +QM LG P++++YTI+++ +C RV E F ++ M ER+ C PN T SL+ G
Sbjct: 243 VYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEM-ERSCCEPNVVTYNSLIDGY 301
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
D VC A +L M ++G +PE+
Sbjct: 302 VSLGD---------------------VCG--------------AKKVLALMSEKG-IPEN 325
Query: 186 STFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
S T T L+ G + + ++ +++ + Y +L+ A AGR + R
Sbjct: 326 SR---TYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALR 382
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + K L N N +I+ +CK+ +++A E+ M+D ++ P+ +NTL+ G C
Sbjct: 383 IRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFC 442
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + K +L + G T+N+++ L E AL + M + GV PN +
Sbjct: 443 KQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEV 502
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY L+ + +G R++ +++ + + I +N +I FC+M K+ +A++ F M
Sbjct: 503 TYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKM 562
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
LG PD +Y LI K G EA + E++G + + N ++ + +
Sbjct: 563 KELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEEL 622
Query: 482 EEAHDIVKTSKERGIS 497
++ + ++ K R +S
Sbjct: 623 QKLNGLLAEMKNRELS 638
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/527 (22%), Positives = 217/527 (41%), Gaps = 35/527 (6%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ +T + N++I+ K ++ A M KPD + YN L+ G C+ +
Sbjct: 390 VGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIK 449
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +L +M G V TY L+ + V + +M +R V PNE T +L+
Sbjct: 450 AFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLD 509
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
F+ +A + + + + NT++ +A I KM + G+ P
Sbjct: 510 AFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPP 569
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ + +L E + D + G+ Y L+ ++++ + + L
Sbjct: 570 DEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLL 629
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS----- 298
+ L NV +Y +I +C MMD+A +M D+ IAPN++ + ++S
Sbjct: 630 AEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRH 689
Query: 299 --------------------GHCKDAEVHKT--RELLVMLLECGFK--------PDKFTF 328
H E+ K+ R L + F + +
Sbjct: 690 GKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVY 749
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N I LC++ +D LS+++ G P+ TY LI + A+G V + L M
Sbjct: 750 NIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMIN 809
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ P+I +NALI C+ +++A + F + GL P +Y+ LI K GR E
Sbjct: 810 AGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTE 869
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
A + M + G P S T + ++ L +G+ E++ ++ + G
Sbjct: 870 ALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 138/336 (41%), Gaps = 54/336 (16%)
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVF------------KDRLVS-------NVNS 257
+P S+Y ++ L +A E YLN + D LVS +
Sbjct: 129 RPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPTV 188
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
++M++ F + M A + M P+L + N+L+S ++ E K + ++
Sbjct: 189 FDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMI 248
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
G PD F++ M++ C+ R ++A + + EM PN +TYN LI ++GDV
Sbjct: 249 ALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVC 308
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+ ++ M I + T+ LI+ +C+ ++E+AEK M+ L D Y LI
Sbjct: 309 GAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLI 368
Query: 438 KALIKSGRFDE-----------------------------------AKQTFLSMEQNGCN 462
A +GR D+ A + +SM+
Sbjct: 369 HAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLK 428
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
PDSY N +L+ +Q F +A + +G++F
Sbjct: 429 PDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNF 464
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 23/197 (11%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV---------------------EWGVPPN 359
F+PD ++ ++ L RA +++ L+E+V E+ P
Sbjct: 128 FRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPT 187
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
++++++ G +L +F M P + + N+L+ + + + KA +
Sbjct: 188 --VFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYE 245
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M+ LG+ PD FSY+ ++ A K GR DEA ME++ C P+ T N +++ V G
Sbjct: 246 QMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLG 305
Query: 480 RFEEAHDIVKTSKERGI 496
A ++ E+GI
Sbjct: 306 DVCGAKKVLALMSEKGI 322
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP+ YN +ID K A +M + P TY+ LIHG+ G +++
Sbjct: 846 GLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQS 905
Query: 65 LRLVKQMEGLGYAPNV 80
+ L+ +M G +V
Sbjct: 906 VGLLNEMMKAGKGSSV 921
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 206/422 (48%), Gaps = 5/422 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ V+ + KS + DL F M V D ++YNI+I+ +CR AL +
Sbjct: 8 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
V +M GY P+V T + LI+GFC RV + ++ M+E P+ +++ G +
Sbjct: 68 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A EL R MER+ + V N+L+ L + S+AA ++R M R +P
Sbjct: 128 IGLVNDAVELFDR-MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 186
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
TF + V +E + + +R V P TY L+ L GR E + L+ +
Sbjct: 187 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 246
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ +V +YN +I+ FCK +D T++ REM R + + +T+NT+I G+ +
Sbjct: 247 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 306
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+E+ + +P+ T++ ++ LC R E AL M + + + TYNI+
Sbjct: 307 DAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 363
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I +C IG+V + LF+ + + PD+ ++ +I FCR + +K++ + M GL
Sbjct: 364 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 423
Query: 427 RP 428
P
Sbjct: 424 LP 425
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 197/421 (46%), Gaps = 3/421 (0%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P ++ ++ I + D + L ME G ++Y+Y I+I+ C R V
Sbjct: 8 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
+ M + P+ TV SL++G + A +L+ + E ++ NT++
Sbjct: 68 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+ ++A + +M G ++ T++ V L ++ ++ + R + P T
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
+ +++ K G+ E + + + + +V +YN +I+ C +D A ++ M
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+ P++VT+NTLI+G CK V + +L + + G D T+N++I +A R +
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
A + S M PN TY+IL+ LC V ++L LF+ MQ I DI T+N +I
Sbjct: 308 AAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 364
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
C++ +E A F S+ GL+PD SY+ +I + ++D++ + M+++G
Sbjct: 365 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 424
Query: 463 P 463
P
Sbjct: 425 P 425
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 124/240 (51%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
SYN+VI+C C+ + A + +M P++VT ++LI+G C+ V +L+ +
Sbjct: 47 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 106
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
E GF+PD +N++ID C+ DA++ M GV + +TYN L+ LC G
Sbjct: 107 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 166
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+ + RL + M I P++ TF A+I F + K +A K + M + PD F+Y++L
Sbjct: 167 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 226
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
I L GR DEAKQ M GC PD T N ++ + R +E + + +RG+
Sbjct: 227 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 286
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 142/280 (50%)
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G+ +Y +++ L + R V + + K +V + + +I+ FC+ N + A
Sbjct: 40 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 99
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
++ +M + P++V +NT+I G CK V+ EL + G + D T+NS++
Sbjct: 100 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 159
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LC + R+ DA + +MV + PN IT+ +I G + +++L+++M + PD
Sbjct: 160 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 219
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
++T+N+LI C ++++A++ M+T G PD +Y+ LI KS R DE + F
Sbjct: 220 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 279
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
M Q G D+ T N I++ Q GR + A +I R
Sbjct: 280 EMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR 319
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 150/320 (46%), Gaps = 3/320 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P +YN +ID K ++ A F +M D + D TYN L+ G+C G +
Sbjct: 109 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 168
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A RL++ M PNV T+T +ID F + +E ++ E M R V P+ T SL++
Sbjct: 169 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 228
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ +A ++L + + L + NTL+ + E + R+M RG +
Sbjct: 229 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 288
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ T++ T + + F + +P TY +L+ L R +
Sbjct: 289 DTITYN---TIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLF 345
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
++ K + ++ +YN+VI CK+ ++ A ++ R + + + P++V++ T+ISG C+
Sbjct: 346 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 405
Query: 304 AEVHKTRELLVMLLECGFKP 323
+ K+ L + E G P
Sbjct: 406 RQWDKSDLLYRKMQEDGLLP 425
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 127/250 (50%)
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + R + ++ ++ V+ K D + M I +L ++N +I+ C+ +
Sbjct: 1 MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
++ +++ G++PD T +S+I+ C+ +R DA+D +S+M E G P+ + YN
Sbjct: 61 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+I C IG V ++ LF +M+ D + D T+N+L+ C + A + M+
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ P+ +++A+I +K G+F EA + + M + +PD +T N ++ L GR +EA
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240
Query: 486 DIVKTSKERG 495
++ +G
Sbjct: 241 QMLDLMVTKG 250
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P F+ ++ + ++ ++ + M G+ + +YNI+I LC +L +
Sbjct: 8 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
KM PD+ T ++LI FC+ N++ A M +G RPD Y+ +I K
Sbjct: 68 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G ++A + F ME++G D+ T N ++ L GR+ +A +++ R I
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 181
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 199/437 (45%), Gaps = 38/437 (8%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
+ +LI +G+V+EAL + +M+ L P + +++DG R +++V M
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
R PN T +L+ G R D KAF L +E++ ++ L+ L S S
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
EA ++ R M + G L P TY +M
Sbjct: 246 EAESMFRTMRNSGML-----------------------------------PNLYTYNTMM 270
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
+ K + + D L+ NV ++ ++ID CK + M A + +M +
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
PN+ +N LI G+CK + + L + + PD FT++ +I LC R E+A
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
L EM + G PN +TYN LI C G++ +++ + +M I P+I TF+ LI +C+
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
K+E A + M+ GL PD +Y+ALI K G EA + M++ G +P+ +T
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFT 510
Query: 468 SNLILETLVQQGRFEEA 484
+ +++ L + GR +A
Sbjct: 511 LSCLIDGLCKDGRISDA 527
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 175/384 (45%), Gaps = 8/384 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ + P+ + N V+D LVK D + + M P+ TY LI G CR G +
Sbjct: 152 MDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLK 211
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A RL +M P V YTILI G C R++E + M+ + PN T +++
Sbjct: 212 AFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMD 271
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + KA EL + L + L+ L A L M G +P
Sbjct: 272 GYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP 331
Query: 184 ESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
++ CL+ G +L+E + K + P TY +L++ L R E
Sbjct: 332 NIFVYN----CLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEA 387
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
D L + K + N +YN +ID +CK M++A E+C +M ++ I PN++TF+TLI G
Sbjct: 388 DGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDG 447
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+CK ++ L ++ G PD + ++ID + ++A EM E G+ PN
Sbjct: 448 YCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPN 507
Query: 360 TITYNILIRSLCAIGDVARSLRLF 383
T + LI LC G ++ +++LF
Sbjct: 508 VFTLSCLIDGLCKDGRISDAIKLF 531
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 186/419 (44%), Gaps = 8/419 (1%)
Query: 86 LIDGFCNAKR---VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFM 142
LI N++R VF VL ++ PN V + ++ E L +
Sbjct: 96 LIQCLQNSRRSRICCSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVE-----EALWVYY 150
Query: 143 EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
+ + L CN +L L + M RG P T+ + D
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
+ + D I++ + P Y +L+ L R E + + ++ N+ +YN ++
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
D +CK+ + +A E+ +EM + PN+VTF LI G CK E+ R+ L+ + G
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P+ F +N +ID C+A +AL SE+ + + P+ TY+ILI+ LC + + + L
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
Q+M+ P+ T+N LI +C+ +EKA + M G+ P+ ++S LI K
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+G+ + A + M G PD +++ + G +EA + K +E G+ F
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF 509
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 97/462 (20%), Positives = 184/462 (39%), Gaps = 65/462 (14%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y A+ID K + A+ ++M P+ FT + LI G+C+ G + +A
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDA 527
Query: 65 LRLVKQMEGL---GYAPNVYT---YTILIDGFCNAKRVAE----VFRVLEIMKERNVCPN 114
++L G G N Y + + ++E V RV ++ N
Sbjct: 528 IKLFLAKTGTDTTGSKTNELDRSLYQMCSLALSLFRGISEPCICVIRVTKLFATNN---- 583
Query: 115 EATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILR 174
+ H L P K+ + L R+++ ++ L+ +L R + +S+ S +
Sbjct: 584 QPKAHLHTH-----LKPPKSNQTLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFAL 638
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
K + T + LV G ++ I G +P L+ ++Y A
Sbjct: 639 K---------ACTLK---SSLVEGKQMHAL------VINFGFEPIIFLQTSLI-SMYSAT 679
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
+V +++F + N+ S+ VI + ++A ++ R+M+ D+ P++VT
Sbjct: 680 GNVAD---AHNMFDEIPSKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVT 736
Query: 295 TLISGHCKDAEVHKTRELL-VMLLECGFKPDKFTFNSMIDCLCR------AHRFEDALDC 347
+S C D E + + G D NS+I+ + A RF L
Sbjct: 737 VALSA-CADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRFSLVL-- 793
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD-RISPDIYTFNALIQSFC 406
PN +T+ ++ + G V + F+ M+ D + P I F ++ C
Sbjct: 794 ----------PNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLC 843
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
R + +A+ +L + +RP+ + L+ A G +D+
Sbjct: 844 RAGLL---TEAYEFILKMPVRPNAVVWRTLLGACSLQGMWDK 882
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 10/184 (5%)
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+++ +++ GF+P F S+I DA + E+ N I++ +I +
Sbjct: 651 KQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPS----KNLISWTSVISA 706
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
++L+LF++MQ D + PDI T + + + ++ E + GL D
Sbjct: 707 YVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTD 766
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
++LI K G A++ L + P+ T +L G EE +
Sbjct: 767 LCLNNSLINMYSKCGEIGTARRFSLVL------PNDVTFMGVLMACSHAGLVEEGKQHFR 820
Query: 490 TSKE 493
+ KE
Sbjct: 821 SMKE 824
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 131/582 (22%), Positives = 246/582 (42%), Gaps = 94/582 (16%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFT-------------------- 47
PS YN +I A +K++ +D A L ++MS+ + D FT
Sbjct: 233 PSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTL 292
Query: 48 ------------YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR 95
Y LI G+C + +EA+ + +M PNV TY+ L+ G N K+
Sbjct: 293 METENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQ 352
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME------------ 143
+ RVL +M P+ SLVH D A++LL + ++
Sbjct: 353 LGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNI 412
Query: 144 --------------------REPLTQKLVCNTLLYRLSNNSMA---------SEAAAILR 174
+ ++ L +L +++ +S +A +++R
Sbjct: 413 LIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIR 472
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
+M +G++P++ST+ + L + + + + G+ TY +++++ KAG
Sbjct: 473 EMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 532
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
+ ++ N + + NV +Y +I + K + A E+ M PN+VT++
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFK-------------------PDKFTFNSMIDCL 335
LI GHCK ++ K ++ + CG K P+ + +++D
Sbjct: 593 ALIDGHCKAGQMEKACQIFERM--CGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGF 650
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
C+ HR E+A L M G PN I Y+ LI LC +G + + + +M +
Sbjct: 651 CKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATL 710
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
YT+++LI + ++ + + A K ML P+ Y+ +I L K G+ DEA +
Sbjct: 711 YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM 770
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
ME+ GC P+ T +++ + G+ E ++++ +G++
Sbjct: 771 MEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVA 812
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/515 (24%), Positives = 223/515 (43%), Gaps = 53/515 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T Y+ V+ L ++ ++LA+L F++M D +TY I++ C+ G++++A
Sbjct: 478 GFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M +G PNV TYT LI + AK+V+ + E M PN T +L+ G
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KA ++ R K V + +Y + SE P
Sbjct: 598 HCKAGQMEKACQIFERM-----CGSKDVPDVDMYFKQYDDDNSER-------------PN 639
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + E +LD G +P Y L++ L K G+ E
Sbjct: 640 VVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKA 699
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + + +Y+ +ID + KV D A+++ +M + APN+V + +I G CK
Sbjct: 700 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 759
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + +L+ M+ E G +P+ T+ +MID R + E L+ L M GV PN +TY
Sbjct: 760 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYR 819
Query: 365 ILIRSLCAIG--DVAR-------------------------------SLRLFQKMQADRI 391
+LI C G DVA SL L ++ D
Sbjct: 820 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQDDT 879
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS--YSALIKALIKSGRFDEA 449
+P + + L+ + + ++E A + + T ++S Y++LI++L + + D+A
Sbjct: 880 APFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKA 939
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ F M + G P+ T +++ L + + EA
Sbjct: 940 FRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEA 974
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/575 (22%), Positives = 232/575 (40%), Gaps = 96/575 (16%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILI--------------------- 52
N ++ +S S +A + ++ + +P R TYN LI
Sbjct: 204 NVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSL 263
Query: 53 --------------HGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE 98
+ +C++G EAL L ME + P+ YT LI G C A E
Sbjct: 264 ANLRMDGFTLRCYAYSLCKVGKWREALTL---METENFVPDTVFYTKLISGLCEASLFEE 320
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
L M+ + PN T +L+ G + +L M + N+L++
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDY----------TVTC-------------L 195
+ S A +L+KM G+ P ++ +++C L
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEML 440
Query: 196 VTGLDLN------------------ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
TG+ LN + ++ I +G P STY ++ L A +
Sbjct: 441 ATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKME 500
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ + LV++V +Y +++D FCK ++++A + EMR+ PN+VT+ LI
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV-EWGV 356
+ K +V EL +L G P+ T++++ID C+A + E A M V
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDV 620
Query: 357 P----------------PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
P PN + Y L+ C + V + +L M + P+ ++A
Sbjct: 621 PDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDA 680
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI C++ K+++A++ M G ++YS+LI K R D A + M +N
Sbjct: 681 LIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 740
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
C P+ +++ L + G+ +EA+ +++ +E+G
Sbjct: 741 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 775
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 203/479 (42%), Gaps = 25/479 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGIC------RI 58
G PS +++N+++ A S AY ++M P YNILI IC
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSC 426
Query: 59 GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
+++ A + +M G N + C+A + + F V+ M + P+ +T
Sbjct: 427 HLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMG 177
++ + AF LL M+R L + T++ + +A +M
Sbjct: 487 SKVLGYLCNASKMELAF-LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG--- 234
+ G P T+ + + ++ + +T + G P TY L++ KAG
Sbjct: 546 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQME 605
Query: 235 ------------RDV-EGDRYLNHVFKDRLV-SNVNSYNMVIDCFCKVNMMDRATEICRE 280
+DV + D Y D NV Y ++D FCK++ ++ A ++
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDA 665
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M PN + ++ LI G CK ++ + +E+ + E GF +T++S+ID + R
Sbjct: 666 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKR 725
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
+ A LS+M+E PN + Y +I LC +G + +L Q M+ P++ T+ A
Sbjct: 726 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 785
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
+I F R+ KIE + M + G+ P+ +Y LI K+G D A M+Q
Sbjct: 786 MIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT 844
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 187/430 (43%), Gaps = 21/430 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G +P+ Y A+I A +K+ + A F+ M + C P+ TY+ LI G C+ G +++
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEK 606
Query: 64 ALRLVKQMEGL-----------------GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
A ++ ++M G PNV Y L+DGFC RV E ++L+ M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAM 666
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
PN+ +L+ G+ + +A E+ E ++L+ R
Sbjct: 667 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQ 726
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
A+ +L KM + P + + L +E ++ ++G +P TY +
Sbjct: 727 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 786
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ + G+ L + + N +Y ++ID CK +D A + EM+
Sbjct: 787 IDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW 846
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
+ + +I G K E ++ LL + + P + ++D L +A R E AL
Sbjct: 847 PTHAAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALR 904
Query: 347 CLSEMVEWGVP--PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
L E+ + + TYN LI SLC V ++ RLF +M + P++ TF +LI+
Sbjct: 905 LLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKG 964
Query: 405 FCRMNKIEKA 414
R +KI +A
Sbjct: 965 LFRNSKISEA 974
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 150/343 (43%), Gaps = 39/343 (11%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ +Y A++D K + ++ A MS++ C+P++ Y+ LI G+C++G +DEA +
Sbjct: 638 PNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 697
Query: 68 VKQMEGLGY-----------------------------------APNVYTYTILIDGFCN 92
+M G+ APNV YT +IDG C
Sbjct: 698 KAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 757
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
+ E ++++++M+E+ PN T +++ G R ELL R + +
Sbjct: 758 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVT 817
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
L+ N A +L +M + ++ + + + E+ G+LD
Sbjct: 818 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF--NKEFIESLGLLDEIG 875
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV--FKDRLVSNVNSYNMVIDCFCKVNM 270
+ P S Y LL++ L KA R R L V F LV ++YN +I+ C N
Sbjct: 876 QDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 935
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+D+A + EM + + P + TF +LI G +++++ + LL
Sbjct: 936 VDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLL 978
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 36/247 (14%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ +Y +ID L K D AY Q M C+P+ TY +I G RIG ++ L
Sbjct: 742 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLE 801
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG-- 124
L+++M G APN TY +LID C + +LE MK+ + + A R ++ G
Sbjct: 802 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFN 861
Query: 125 -----------------------VFRCLDPH----KAFELLIRFMER-EPLTQKLV---- 152
++R L + + E+ +R +E + LV
Sbjct: 862 KEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSS 921
Query: 153 -CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
N+L+ L + +A + +M +G +PE TF + L ++E +LD F
Sbjct: 922 TYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLD-F 980
Query: 212 IKRGVKP 218
I V P
Sbjct: 981 ISHMVCP 987
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 89/232 (38%), Gaps = 3/232 (1%)
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
YN ++D + + E+ +++RD D N L+ +C+ E L L
Sbjct: 168 YNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLK 227
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
+ F+P + T+N +I +A + A EM + + T SLC +G
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWR 287
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+L L M+ + PD + LI C + E+A M P+ +YS L+
Sbjct: 288 EALTL---METENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+ + K+ M GC P N ++ G A+ ++K
Sbjct: 345 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 396
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 3/171 (1%)
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
+ G+K +N+++D + R + + L ++ + N+L+R C G +
Sbjct: 158 QIGYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFS 217
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+L +++ R P T+N LIQ+F + + ++ A M LR D F+
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYA 277
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+L K G++ EA ME PD+ ++ L + FEEA D +
Sbjct: 278 YSLCKVGKWREA---LTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFL 325
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 55/138 (39%)
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
+ G + YN L+ + D L Q+++ D N L++ +CR
Sbjct: 158 QIGYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFS 217
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
A + + RP +Y+ LI+A +K+ D A M D +T
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYA 277
Query: 473 ETLVQQGRFEEAHDIVKT 490
+L + G++ EA +++T
Sbjct: 278 YSLCKVGKWREALTLMET 295
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 200/438 (45%), Gaps = 37/438 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN +I AL K ID A F++M + C PD FTY+ L++G+C+ VDEA
Sbjct: 169 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 228
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M+ G PN T+ +LID ++ ++++ M + PNE T +L+HG
Sbjct: 229 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 288
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ CL +A ++L KM +P
Sbjct: 289 L--CL---------------------------------KGKLDKALSLLEKMVSSKCVPN 313
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + LV + IL + +RG K Y L+ L+K G+ R
Sbjct: 314 QVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWK 373
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + NV Y ID C+ D A +I +EM + PN T+++L+ G K
Sbjct: 374 EMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKG 433
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ K + ++ + + + +++ LC + R +AL + M+ G+ P+ + Y+
Sbjct: 434 DSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYS 493
Query: 365 ILIRSLCAIGDVARSLRLFQKMQAD--RISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+I+ LC +G V + L+LF +MQ + PD+ T+N L + CR + + +A SML
Sbjct: 494 SMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSML 553
Query: 423 TLGLRPDNFSYSALIKAL 440
G PD+ + + ++ L
Sbjct: 554 DEGCDPDSLTCNIFLETL 571
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/475 (23%), Positives = 217/475 (45%), Gaps = 40/475 (8%)
Query: 9 STRLYNAVIDALVKSNSIDLA---YLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ + +N+V++ +++ A YL + +P+ TYN++I +C++G +D A+
Sbjct: 135 TVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAV 194
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
++M P+V+TY+ L++G C +RV E +L+ M+ PN T L+ +
Sbjct: 195 DTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDAL 254
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ D +A +L+ + + ++ NTL++ L +A ++L KM +P
Sbjct: 255 SKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQ 314
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + LV + IL + +RG K Y L+ L+K G+
Sbjct: 315 VTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKS--------- 365
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ A + +EM ++ PN+V + I G C+D +
Sbjct: 366 --------------------------ENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 399
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ ++L +L GF P+ FT++S++ + + A+ EM+ + N + ++
Sbjct: 400 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 459
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM--LT 423
L+ LC G + +L ++ M + + PD+ ++++I+ C + ++K K F+ M
Sbjct: 460 LLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQE 519
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
RPD +Y+ L AL + A SM GC+PDS T N+ LETL ++
Sbjct: 520 PKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRER 574
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 189/431 (43%), Gaps = 23/431 (5%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P Y+ +++ L K +D A +M + C P+ T+N+LI + + G + A +
Sbjct: 206 NPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAK 265
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
LV M G PN TY LI G C ++ + +LE M PN+ T ++++G+
Sbjct: 266 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLV 325
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ +L+ ER + + ++L+ L + A + ++M ++G P
Sbjct: 326 KQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVV 385
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ + L +E IL + +G P TY LM+ +K G + +
Sbjct: 386 VYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEM 445
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ NV +++++ C+ + A + M + P++V ++++I G C V
Sbjct: 446 MSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSV 505
Query: 307 HKTRELLVML--LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
K +L + E +PD T+N + + LCR A+D L+ M++ G P+++T N
Sbjct: 506 DKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCN 565
Query: 365 ILIRSLCAIGDVARSLRLF------------QKMQADRI---------SPDIYTFNALIQ 403
I + +L + + RLF +K+ A RI P+ T++ +IQ
Sbjct: 566 IFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQ 625
Query: 404 SFCRMNKIEKA 414
C+ +I +
Sbjct: 626 RTCKPKRIRET 636
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 8/272 (2%)
Query: 238 EGD-----RYLNHVF---KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
EGD ++ HVF N+ +YN++I CK+ +DRA + REM ++ P+
Sbjct: 149 EGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPD 208
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+ T++TL++G CK+ V + LL + G P+ TFN +ID L + A +
Sbjct: 209 VFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVD 268
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
M G PN +TYN LI LC G + ++L L +KM + + P+ T+ +I +
Sbjct: 269 NMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQR 328
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
+ E SM G + + + YS+LI L K G+ + A + + M + GC P+
Sbjct: 329 RAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYG 388
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
++ L + + +EA DI++ +G +F
Sbjct: 389 AFIDGLCRDEKPDEAEDILQEMLSKGFLPNAF 420
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 144/309 (46%), Gaps = 6/309 (1%)
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK---PRFSTYLLLMEALYKAGR 235
+G+ P T++ + L L + +DTF + +K P TY LM L K R
Sbjct: 168 KGFQPNLLTYNLIIKALCK---LGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERR 224
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
E L+ + + + N ++N++ID K + RA ++ M + PN VT+NT
Sbjct: 225 VDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNT 284
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
LI G C ++ K LL ++ P++ T+ ++I+ L + R ED + L M E G
Sbjct: 285 LIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERG 344
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
N Y+ LI L G ++RL+++M P++ + A I CR K ++AE
Sbjct: 345 QKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAE 404
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
ML+ G P+ F+YS+L+K K G +A + M + +++L L
Sbjct: 405 DILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGL 464
Query: 476 VQQGRFEEA 484
+ GR EA
Sbjct: 465 CESGRLREA 473
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 161/382 (42%), Gaps = 37/382 (9%)
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
L N ++ L A R+M + P+ T+ + L ++E +LD
Sbjct: 175 LTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDE 234
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
G P T+ +L++AL K G + ++++F V N +YN +I C
Sbjct: 235 MQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 294
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+D+A + +M PN VT+ T+I+G K +L+ + E G K +++ ++S
Sbjct: 295 LDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSS 354
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I L + + E+A+ EM E G PN + Y I LC + + Q+M +
Sbjct: 355 LISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG 414
Query: 391 ISPDIYTFNALIQSF-----------------------------------CRMNKIEKAE 415
P+ +T+++L++ F C ++ +A
Sbjct: 415 FLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREAL 474
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM--EQNGCNPDSYTSNLILE 473
+ ML GL+PD +YS++IK L G D+ + F M ++ PD T N++
Sbjct: 475 TVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFN 534
Query: 474 TLVQQGRFEEAHDIVKTSKERG 495
L +Q A D++ + + G
Sbjct: 535 ALCRQDNLTRAIDLLNSMLDEG 556
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 5/130 (3%)
Query: 360 TITYNILIRSLCAIGDV-ARSLRLFQKMQAD-RISPDIYTFNALIQSFCRMNKIEKAEKA 417
T T ILI C + ++ F +M D + +FN+++ + A K
Sbjct: 99 TETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKF 158
Query: 418 F---FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
+ F + G +P+ +Y+ +IKAL K G+ D A TF M CNPD +T + ++
Sbjct: 159 YLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNG 218
Query: 475 LVQQGRFEEA 484
L ++ R +EA
Sbjct: 219 LCKERRVDEA 228
>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
Length = 792
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 206/477 (43%), Gaps = 36/477 (7%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F ++ D P TY +LI G G+ DE +L +QM G + Y + ++I G
Sbjct: 314 FDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLR 373
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
KR + +LE++ + V P+ T L+H + + H+A L + E +
Sbjct: 374 DKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVT 432
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
++LL EA + +M D+G+ P T+ + + + +L+
Sbjct: 433 YHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMR 492
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+ GV TY +L+ LY R E D L + V +YN +I+ F K MM
Sbjct: 493 QNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMG 552
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + R+MR + I PN+VT+ + I G+C+ +LL+ + G +PD +N+ I
Sbjct: 553 SAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFI 612
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYN---------------------------- 364
D C+ AL L +++ G+ P+ YN
Sbjct: 613 DTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVV 672
Query: 365 -------ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
LI +G+VA +L L+ +M A+ + PD TF AL CR I+ A++
Sbjct: 673 ADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRL 732
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
M L + P+ +Y+ LI A ++ G+ EA Q M +G PD T +++ T
Sbjct: 733 LDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDILPRT 789
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/501 (22%), Positives = 205/501 (40%), Gaps = 37/501 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P + ++ + S A F +M C D Y+++I R G+ +A
Sbjct: 145 GVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDA 204
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV-- 122
+RL +M G G P+ Y I I G C + +VL M+E P E T S+V
Sbjct: 205 VRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDV 264
Query: 123 ----------------------------------HGVFRCLDPHKAFELLIRFMEREPLT 148
HG + KA +L +
Sbjct: 265 LVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTP 324
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
+ L+ M+ E + R+M ++G L + F+ + L+ + G+L
Sbjct: 325 TNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLL 384
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ + GV P TY L+ L K + E + + + + ++ +Y+ ++ +C+
Sbjct: 385 ELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEK 443
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
MD A ++ EM D+ PN VT+ TL+ G+ K LL + + G +T+
Sbjct: 444 GRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTY 503
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N +I+ L +R + + L + G P T+TYN +I G + + ++++M+
Sbjct: 504 NILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRK 563
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
I+P+I T+ + I +CR N + A K + G++PD +Y+A I K G
Sbjct: 564 KGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSR 623
Query: 449 AKQTFLSMEQNGCNPDSYTSN 469
A + + ++G PD N
Sbjct: 624 ALHFLVLLLKDGLTPDVTVYN 644
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 121/522 (23%), Positives = 222/522 (42%), Gaps = 42/522 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAY-LKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P Y++V+D LVK +D A LK Q + K D +L+HG C G V +
Sbjct: 250 GFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGK 309
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVA-EVFRVLEIMKERNVCPNEATVRSLV 122
AL L ++ G P TY +LI G C+A+ ++ E +++ M E+ + + ++
Sbjct: 310 ALDLFDEVVSDGVTPTNVTYGVLIKG-CDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVI 368
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ R A LL + + L++ L + EA + KM + G
Sbjct: 369 KGLLRDKRWKDAIGLL-ELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVK 427
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T+ + ++E + +G P TY LM+ K
Sbjct: 428 PSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYAL 487
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
LN + ++ + +YN++I+ VN + E+ + P +T+N++I+G K
Sbjct: 488 LNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVK 547
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + + G P+ T+ S ID CR + + A+ L + G+ P+
Sbjct: 548 AGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAA 607
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN I + C G+++R+L + D ++PD+ +N+ + + + + +A K ++SM+
Sbjct: 608 YNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMI 667
Query: 423 ------------TL-----------------------GLRPDNFSYSALIKALIKSGRFD 447
TL + PD+ +++AL L +SG D
Sbjct: 668 KQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDID 727
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA---HD 486
AK+ M + +P+ T N+++ V+ G+ +EA HD
Sbjct: 728 GAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHD 769
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 150/386 (38%), Gaps = 72/386 (18%)
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
+M RG +P++ + + G + + D +G Y +++ A + G
Sbjct: 140 RMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGG 199
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
+ R + + + + Y + I CK+ DRA ++ +MR+ P +T++
Sbjct: 200 MHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYS 259
Query: 295 T------------------------------------LISGHCKDAEVHKTRELLVMLLE 318
+ L+ G+C EV K +L ++
Sbjct: 260 SVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVS 319
Query: 319 CGFKPDKFT-----------------------------------FNSMIDCLCRAHRFED 343
G P T FN +I L R R++D
Sbjct: 320 DGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKD 379
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A+ L +V+ GV P+ TY LI LC + ++ L+ KM+ + P I T+++L+
Sbjct: 380 AIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLL 438
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+C ++++A K + M G P+ +Y+ L+K IK FD A M QNG +
Sbjct: 439 GYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSC 498
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVK 489
YT N+++ L R E +++K
Sbjct: 499 GDYTYNILINGLYMVNRVCEVDEMLK 524
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 95/252 (37%), Gaps = 36/252 (14%)
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M R + P+ + L+ + A L + G D ++ +I R
Sbjct: 141 MVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGM 200
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP------- 393
DA+ EM GV P+ Y I I LC + D R+L++ KM+ P
Sbjct: 201 HCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSS 260
Query: 394 -----------------------------DIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
D+ L+ +C ++ KA F +++
Sbjct: 261 VVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSD 320
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ P N +Y LIK G DE + M + G +Y NL+++ L++ R+++A
Sbjct: 321 GVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDA 380
Query: 485 HDIVKTSKERGI 496
+++ + G+
Sbjct: 381 IGLLELVVDTGV 392
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%)
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
S MV GV P+ + L+ + A +L LF +M+ D ++ +I++ R
Sbjct: 139 SRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRG 198
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
A + F M G++PD Y+ I L K D A Q M + G P T
Sbjct: 199 GMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258
Query: 469 NLILETLVQQGRFEEA 484
+ +++ LV+ GR +EA
Sbjct: 259 SSVVDVLVKVGRMDEA 274
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 127/496 (25%), Positives = 231/496 (46%), Gaps = 11/496 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISPS NAV+ L +I+L FQ++ + +YNIL+ +C G V +A
Sbjct: 227 GISPSPEACNAVLSRLPLDEAIEL----FQELP----HKNVCSYNILLKALCDAGRVKDA 278
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L +M AP+V TY ILI G C + ++L+ M V PN S+V
Sbjct: 279 RQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVAL 335
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A ++ ++R+ + + + T+L N A +M +G +
Sbjct: 336 LCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATD 395
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L ++L E +L R + TY +L++ K G+ E + N
Sbjct: 396 GVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHN 455
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + NV +Y + D CK + A E+ EM ++ + N T+N+LI+G CK
Sbjct: 456 AMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAG 515
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + + KPD +T+ ++ID LC++ + A L EM++ G+ P +TYN
Sbjct: 516 YLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYN 575
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+L+ C G V +L M I P+ T+N+L++ +C N ++ + + M +
Sbjct: 576 VLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSR 635
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ P+ +Y+ LIK K+ EA M Q G + + + ++ L ++ +F EA
Sbjct: 636 DVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEA 695
Query: 485 HDIVKTSKERGISFKS 500
++ ++ G++ +S
Sbjct: 696 RELFHDMRKEGLTAES 711
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 166/356 (46%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
LY V+ + A F +M D TY +I+G+CR ++EA +L+++M
Sbjct: 363 LYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEM 422
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
+ TYT+LIDG+C ++AE F++ M +R V PN T +L G+ + D
Sbjct: 423 WARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDV 482
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
A ELL + N+L+ L +A + M P+ T+
Sbjct: 483 QAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTL 542
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ L DL+ +L + +G+KP TY +LM +GR G + L+ + + +
Sbjct: 543 IDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNI 602
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
N +YN ++ +C N M TEI + MR RD+ PN T+N LI GHCK + +
Sbjct: 603 HPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALY 662
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+++ GF+ +++++I L + +F +A + +M + G+ + Y+ I
Sbjct: 663 FHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYI 718
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 129/345 (37%), Gaps = 37/345 (10%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y +ID K + A+ M P+ TY L G+C+ G V A L+ +M
Sbjct: 434 YTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMS 493
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G N TY LI+G C A + + R + M + P+ T +L+ + + D
Sbjct: 494 NKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLD 553
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A L L++M D+G P T++ +
Sbjct: 554 RAHSL-----------------------------------LQEMLDKGIKPTIVTYNVLM 578
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+ +LD +++ + P +TY LM+ Y +++ + + R V
Sbjct: 579 NGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQ-YCIENNMKSTTEIYKGMRSRDV 637
Query: 253 S-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
N N+YN++I CK M A EM + +++ LI K + + RE
Sbjct: 638 GPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARE 697
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
L + + G + ++ ID E L E+VE +
Sbjct: 698 LFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVEASI 742
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 206/457 (45%), Gaps = 35/457 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + ++ + K D+ F+QM + P +T NI+++ +CR A
Sbjct: 80 PSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCF 139
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LG+ P++ T+T L+ GFC+ R+ + + + + PN T +L+H
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIH---- 195
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
C L N + A I +MGD G P T
Sbjct: 196 -------------------------C------LCKNRHLNHAVEIFNQMGDNGIRPNVVT 224
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ V+ L ++ +L +KRG++P T+ L++A K G+ +E +
Sbjct: 225 YNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMI 284
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ + +V +Y +I+ C +D A ++ M PN VT+ TLI G CK V
Sbjct: 285 QMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVE 344
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
++ + + G + T+ +I C R + A + ++M PP+ TYN+L+
Sbjct: 345 DGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLL 404
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G V ++L +F+ M+ + +I T+ +IQ C++ K+E A F S+ + G++
Sbjct: 405 DGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMK 464
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
P+ +Y+ +I + G EA F M+++G P+
Sbjct: 465 PNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 201/434 (46%)
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
+EAL L +M P++ +T L+ KR V + E M+ + P T +
Sbjct: 64 NEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIV 123
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++ V R P +A L + M+ + +LL+ + + +A A+ ++ G+
Sbjct: 124 MNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGF 183
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P T+ + CL LN I + G++P TY L+ L + GR +
Sbjct: 184 RPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAW 243
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + K + NV ++ +ID F KV + A E+ + M + P++ T+ LI+G C
Sbjct: 244 LLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLC 303
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ + R++ ++ G+ P++ T+ ++I C++ R ED EM + G+ NTI
Sbjct: 304 TYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTI 363
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY +LI+ C +G + +F +M + R PDI T+N L+ C +EKA F M
Sbjct: 364 TYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYM 423
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ + +Y+ +I+ + K G+ ++A F S+ G P+ T ++ ++G
Sbjct: 424 RKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFI 483
Query: 482 EEAHDIVKTSKERG 495
EA + K KE G
Sbjct: 484 HEADALFKKMKEDG 497
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 129/238 (54%)
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
N+V++C C+ + RA+ +M P+LVTF +L+ G C + L ++
Sbjct: 121 NIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVG 180
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
GF+P+ T+ ++I CLC+ A++ ++M + G+ PN +TYN L+ LC IG +
Sbjct: 181 MGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSD 240
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+ L + M I P++ TF ALI +F ++ KI +A++ + M+ + + PD F+Y+ALI
Sbjct: 241 AAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALIN 300
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
L GR DEA+Q F ME NG P+ T ++ + R E+ I ++G+
Sbjct: 301 GLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGL 358
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 150/356 (42%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P + +++ N I+ A F Q+ +P+ TY LIH +C+ ++
Sbjct: 146 LGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNH 205
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ + QM G PNV TY L+ G C R ++ +L M +R + PN T +L+
Sbjct: 206 AVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALID 265
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ +A EL ++ L+ L EA + M GY P
Sbjct: 266 AFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYP 325
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ + + + I ++G+ TY +L++ GR
Sbjct: 326 NEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVF 385
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + R ++ +YN+++D C +++A I + MR R++ N+VT+ +I G CK
Sbjct: 386 NQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKV 445
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+V +L L G KP+ T+ +MI CR +A +M E G PN
Sbjct: 446 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 84/175 (48%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P F ++ + + RF+ + +M G+ P T NI++ +C R+
Sbjct: 80 PSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCF 139
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
KM PD+ TF +L+ FC N+IE A F ++ +G RP+ +Y+ LI L K
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ + A + F M NG P+ T N ++ L + GR+ +A +++ +RGI
Sbjct: 200 NRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQ 254
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 78/183 (42%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y +I KS ++ F +MS + TY +LI G C +G D A
Sbjct: 322 GYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVA 381
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ QM P++ TY +L+DG C V + + + M++R + N T ++ G
Sbjct: 382 QEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQG 441
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + AF+L + + T++ EA A+ +KM + G+LP
Sbjct: 442 MCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501
Query: 185 SST 187
S
Sbjct: 502 ESV 504
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 213/488 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T YNA++ K+ A ++M + C D TYN L+ R G EA
Sbjct: 318 GYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEA 377
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ M G PN TYT +ID + A + E ++ MKE PN T +++
Sbjct: 378 AVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSM 437
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + ++ ++L + NT+L N M + R+M G+ P+
Sbjct: 438 LGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPD 497
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ ++ + + + G +TY L+ AL + G G+ ++
Sbjct: 498 RDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVIS 557
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ SY++++ C+ K I + + I P+ + TL+ + K
Sbjct: 558 DMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCR 617
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + + G+KPD FNSM+ R + ++ A L + E G+ P+ +TYN
Sbjct: 618 ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYN 677
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ G+ ++ + + ++ ++ PD+ ++N +I+ FCR +++A + M
Sbjct: 678 SLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTER 737
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+RP F+Y+ + G + E + M +N C P+ T ++++ + G++ EA
Sbjct: 738 GIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 797
Query: 485 HDIVKTSK 492
D V K
Sbjct: 798 MDFVSKIK 805
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 215/485 (44%), Gaps = 40/485 (8%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVA-EVFRV 102
D Y ++H R G ++A+ L ++M+ +G +P + TY +++D F R ++ V
Sbjct: 216 DVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 275
Query: 103 LEIMKERNVCPNEATVRSLVHGVFR--CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
LE M+ + + +E T +++ R L K F ++ EP T + N LL
Sbjct: 276 LEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGT--VTYNALLQVF 333
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
+ +EA ++L++M + +S T++ V E +++ ++GV P
Sbjct: 334 GKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNA 393
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID----------------- 263
TY +++A KAG++ E + + + V N +YN V+
Sbjct: 394 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCD 453
Query: 264 -----CF------------CKVNMMDR-ATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
CF C MD+ + REM+ P+ TFNTLIS + +
Sbjct: 454 MKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 513
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
++ + GF T+N++++ L R + + +S+M G P +Y++
Sbjct: 514 EVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSL 573
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+++ G+ R+ + + +I P L+ + + + +E+AF G
Sbjct: 574 MLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHG 633
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+PD +++++ ++ +D+A+ S+ ++G NPD T N +++ V++G +A
Sbjct: 634 YKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAE 693
Query: 486 DIVKT 490
+I+KT
Sbjct: 694 EILKT 698
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P YN+++D V+ A + + Q KPD +YN +I G CR G++ EA
Sbjct: 668 GLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEA 727
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+R++ +M G P ++TY + G+ E+ V+E M + + PNE T + +V G
Sbjct: 728 VRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRPNELTFKMVVDG 787
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
R +A + + + +P L R+ N
Sbjct: 788 YCRAGKYSEAMDFVSKIKTFDPCFDDQSIQRLALRVREN 826
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 87/174 (50%), Gaps = 1/174 (0%)
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS-LRL 382
D + +++ R ++E A++ M E G P +TYN+++ +G R L +
Sbjct: 216 DVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 275
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
++M++ + D +T + ++ + R + +A+ F + + G P +Y+AL++ K
Sbjct: 276 LEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGK 335
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+G + EA ME+N C DS T N ++ + G +EA +++ ++G+
Sbjct: 336 AGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGV 389
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/319 (18%), Positives = 126/319 (39%), Gaps = 41/319 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P +N +I A + S A + +M+ TYN L++ + R G
Sbjct: 493 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 552
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ M+ G+ P +Y++++ + + R+ E + E + P+ +R+L+
Sbjct: 553 ENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLA 612
Query: 125 VFRC---LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
F+C +AF L + + + ++ N++L + N+M +A IL+ + + G
Sbjct: 613 NFKCRALAGSERAFTLFKKHGYKPDM---VIFNSMLSIFTRNNMYDQAEGILQSIHEDGL 669
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P+ T++ + V + + IL T K +KP +Y +++ + G E R
Sbjct: 670 NPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVR 729
Query: 242 YLNHVFKDRLVSNVNSYN-----------------------------------MVIDCFC 266
L+ + + + + +YN MV+D +C
Sbjct: 730 MLSEMTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRPNELTFKMVVDGYC 789
Query: 267 KVNMMDRATEICREMRDRD 285
+ A + +++ D
Sbjct: 790 RAGKYSEAMDFVSKIKTFD 808
>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
Length = 871
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 142/518 (27%), Positives = 230/518 (44%), Gaps = 67/518 (12%)
Query: 49 NILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
N ++ G CR G VDEA RLV++M G APNV T+ I C A RV + +R+ M+E
Sbjct: 216 NTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQE 275
Query: 109 RN----VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNN 163
+ P++ T ++ G +A +L+ M +++ N L L N
Sbjct: 276 KWERGLPRPDQVTFDVMLSGFCEAGMVDEA-RVLVDIMRCGGFLRRVESYNRWLSGLVRN 334
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCL---------------------------V 196
M EA +LR+M G P S T++ V L
Sbjct: 335 GMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTY 394
Query: 197 TGLDLNETCG---------ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
T L L+ C ILD ++G P TY +L+++L+KAGR E +R L +
Sbjct: 395 TSL-LHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMS 453
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD-----------------------R 284
+ + S N++ID C+ N +D A +I M + +
Sbjct: 454 EKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSK 513
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
P+ +T++TL+S CK+ + ++ L+ ++ PD +++ I C+ + A
Sbjct: 514 RCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLA 573
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
+ L +M + G P+T TYN+LI + L+L +M+ I P++ T+N+LI+S
Sbjct: 574 VKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKS 633
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
FC + KA ML + P+ S+ LIKA K+ F A++ F + C
Sbjct: 634 FCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVF-DASLSTCGQK 692
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFP 502
+L+ L GR+ EA +I++T E IS FP
Sbjct: 693 EVLYSLMCTQLSTYGRWLEAMNILETVLELRISIHRFP 730
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 136/534 (25%), Positives = 234/534 (43%), Gaps = 54/534 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ----CKPDRFTYNILIHGICRIGV 60
G++P+ +NA I AL K+ + AY F M +PD+ T+++++ G C G+
Sbjct: 242 GLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGM 301
Query: 61 VDEA------------LR-----------------------LVKQMEGLGYAPNVYTYTI 85
VDEA LR L+++M G PN YTY I
Sbjct: 302 VDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNI 361
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
++DG C + +V +V + +K + P+ T SL+H + A +L ++
Sbjct: 362 IVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKG 421
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
N LL L +EA +L +M ++GY ++++ + + L L+
Sbjct: 422 CAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAM 481
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
I+D G L L Y + DR+ +Y+ ++
Sbjct: 482 DIVDGMWNEGS-------LALGRLGYSFLSLLTDSSSSKRCLPDRI-----TYSTLVSAL 529
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
CK D A + EM +DI+P+ V ++T I G+CK + ++L + + G KP
Sbjct: 530 CKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPST 589
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T+N +I H ++ L +SEM G+ PN +TYN LI+S C G V +++ L +
Sbjct: 590 RTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDE 649
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAF-FSMLTLGLRPDNFSYSALIKALIKSG 444
M + I P+I +F LI++FC+ + A++ F S+ T G + YS + L G
Sbjct: 650 MLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLSTCGQK--EVLYSLMCTQLSTYG 707
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
R+ EA ++ + + + I+E L + + H ++K +G SF
Sbjct: 708 RWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGYSF 761
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 220/498 (44%), Gaps = 28/498 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDR--FTYNILIHGICRIGVVD 62
G +P N ++ AL + ++LA F M P+R F++ IL G CR G
Sbjct: 145 GAAPDVFTRNILLQALCAAGRMELARRVFDAM------PERNEFSFGILARGYCRAGRSM 198
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+AL ++ M + N+ ++ GFC +V E R++E M++ + PN T + +
Sbjct: 199 DALGVLDSMPTM----NLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARI 254
Query: 123 HGV---FRCLDPHKAFELLIRFMERE-PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
+ R LD ++ F + ER P ++ + +L M EA ++ M
Sbjct: 255 SALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRC 314
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G+L +++ ++ LV + E +L GV+P TY ++++ L K G+ +
Sbjct: 315 GGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFD 374
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + V + +V +Y ++ +C A I EM + APN T+N L+
Sbjct: 375 VRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQ 434
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
K + + LL + E G+ D + N +ID LCR ++ + A+D + M
Sbjct: 435 SLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGM------- 487
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+N +L +G + L + R PD T++ L+ + C+ + ++A+K
Sbjct: 488 ----WNEGSLALGRLG-YSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKL 542
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M+ + PD+ Y I K G+ A + ME+ GC P + T NL++ ++
Sbjct: 543 LEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREK 602
Query: 479 GRFEEAHDIVKTSKERGI 496
+E ++ K +GI
Sbjct: 603 HNSDEILKLISEMKGKGI 620
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 181/428 (42%), Gaps = 15/428 (3%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P Y +++ A + A +M+ C P+ FTYN+L+ + + G + EA
Sbjct: 387 MTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAE 446
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
RL+++M GY+ + + I+IDG C ++ +++ M NE SL G
Sbjct: 447 RLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMW------NEG---SLALGR 497
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
L L + L ++ +TL+ L EA L +M + P+S
Sbjct: 498 ---LGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDS 554
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+D + + +L K+G KP TY LL+ + E + ++
Sbjct: 555 VLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISE 614
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + NV +YN +I FC+ M+++A + EM +I PN+ +F LI CK ++
Sbjct: 615 MKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSD 674
Query: 306 VHKTRELL-VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L CG K + ++ M L R+ +A++ L ++E + + Y
Sbjct: 675 FSAAQRVFDASLSTCGQK--EVLYSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYK 732
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I LC + +V RL + + S D F +I + K + + M+ +
Sbjct: 733 QIIEGLCKVDEVDHGHRLLKLLMVKGYSFDPAAFMPVIDALSERGKKQHVDMLSQKMMEM 792
Query: 425 GLRPDNFS 432
R + +
Sbjct: 793 AERDNGLA 800
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 148/325 (45%), Gaps = 47/325 (14%)
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G P T +L++AL AGR +E R + +R N S+ ++ +C+ A
Sbjct: 145 GAAPDVFTRNILLQALCAAGR-MELARRVFDAMPER---NEFSFGILARGYCRAGRSMDA 200
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ M NLV NT+++G C++ +V + L+ + + G P+ TFN+ I
Sbjct: 201 LGVLDSMP----TMNLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISA 256
Query: 335 LCRAHRFEDALDCLSEMVE-W--GVP-PNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
LC+A R DA ++M E W G+P P+ +T+++++ C G V + L M+
Sbjct: 257 LCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGG 316
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR-FD-- 447
+ ++N + R + +A++ M G++P++++Y+ ++ L K G+ FD
Sbjct: 317 FLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVR 376
Query: 448 --------------------------------EAKQTFLSMEQNGCNPDSYTSNLILETL 475
A + M Q GC P+S+T N++L++L
Sbjct: 377 KVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSL 436
Query: 476 VQQGRFEEAHDIVKTSKERGISFKS 500
+ GR EA +++ E+G S +
Sbjct: 437 WKAGRITEAERLLERMSEKGYSLDT 461
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 154/361 (42%), Gaps = 38/361 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P++ YN ++ +L K+ I A ++MS D + NI+I G+CR +D A
Sbjct: 421 GCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMA 480
Query: 65 LRLVKQM--EG------LGYA---------------PNVYTYTILIDGFCNAKRVAEVFR 101
+ +V M EG LGY+ P+ TY+ L+ C R E +
Sbjct: 481 MDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKK 540
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMER---EPLTQKLVCNTLLY 158
L M +++ P+ + +HG + A ++L R ME+ +P T+ N L++
Sbjct: 541 KLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVL-RDMEKKGCKPSTRTY--NLLIW 597
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
+ E ++ +M +G P T++ + +N+ +LD ++ + P
Sbjct: 598 GFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVP 657
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC-KVNMMDR---A 274
+++ LL++A K R VF D +S ++ C +++ R A
Sbjct: 658 NITSFELLIKAFCKTSDFSAAQR----VF-DASLSTCGQKEVLYSLMCTQLSTYGRWLEA 712
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
I + + I+ + + +I G CK EV LL +L+ G+ D F +ID
Sbjct: 713 MNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGYSFDPAAFMPVIDA 772
Query: 335 L 335
L
Sbjct: 773 L 773
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 134/560 (23%), Positives = 227/560 (40%), Gaps = 68/560 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P T YN +I A K S+ +A+ F + + D +T N L+ G CR + +A
Sbjct: 174 GLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKA 233
Query: 65 LRLVKQMEGLGYAPNVYTYTILID-----------------------------------G 89
L+ M +G N Y+YTILI G
Sbjct: 234 CWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKG 293
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C R+ + +L+ M R V P+ T +++ G + A + +
Sbjct: 294 LCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPD 353
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
N+L+Y L + EA +L RG+ P TF + +++ +
Sbjct: 354 DWTYNSLIYGLCGGKL-DEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKS 412
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
I K Y +L+ L K R E LN +F + L NV Y +ID +CKV
Sbjct: 413 NMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVG 472
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
M+ A E+ + M PN T+ +LI G +D ++HK L+ + E G P +
Sbjct: 473 MVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYT 532
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR-------- 381
++I C+ H F++A M + G+ P+ YN+L +LC G +
Sbjct: 533 TLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVV 592
Query: 382 ------------------------LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
L +KM + D+YT++ L+Q+ C+ K+ +A
Sbjct: 593 LTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSI 652
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
M G++ + +Y+ +I +IK G+ D AK F M +G P + T + + + +
Sbjct: 653 LDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCK 712
Query: 478 QGRFEEAHDIVKTSKERGIS 497
G+ EEA ++ + G++
Sbjct: 713 IGQIEEAEHLIGEMERDGVT 732
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 206/473 (43%), Gaps = 4/473 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS YNA+ID KS + A M + C PD +TYN LI+G+C G +DEA
Sbjct: 314 GVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEA 372
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ G+ P V T+T LI+G+C A+R+ + RV M N + L++
Sbjct: 373 EELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINV 432
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A E L ++ +++ M A + + M G P
Sbjct: 433 LIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPN 492
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T+ + L+ L++ ++ + G+ P Y L++ K R
Sbjct: 493 AWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFE 552
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K+ L + +YN++ D CK RA E + + + VT+ +L+ G K
Sbjct: 553 MMEKNGLTPDEQAYNVLTDALCKSG---RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAG 609
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
L+ ++ G K D +T++ ++ LC+ + +AL L +M GV N + Y
Sbjct: 610 NTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYT 669
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+I + G + LF +M + P T+ I S+C++ +IE+AE M
Sbjct: 670 IIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERD 729
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
G+ PD +Y I G D A T M C P+ +T L+L+ ++
Sbjct: 730 GVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLK 782
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/522 (22%), Positives = 217/522 (41%), Gaps = 54/522 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ +Y ++ID K + A F+ M + C P+ +TY LI+G+ + + +A
Sbjct: 453 GLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKA 512
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M+ G P V YT LI G C FR+ E+M++ + P+E L
Sbjct: 513 MALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDA 572
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A+ L+R + + K+ +L+ S AA ++ KM + G +
Sbjct: 573 LCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKAD 629
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L LNE ILD GVK Y +++ + K G+ N
Sbjct: 630 LYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFN 689
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG----- 299
+ + +Y + I +CK+ ++ A + EM + P++VT++ I+G
Sbjct: 690 EMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMG 749
Query: 300 ---------------------------------------HCKDA-------EVHKTRELL 313
H D E++ +LL
Sbjct: 750 YMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLL 809
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+++ G P T++S+I C+A R E+A L M+ + PN Y +LI+ C I
Sbjct: 810 ERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDI 869
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
+ + M P + +++ LI C ++A+ F +L + + ++
Sbjct: 870 KLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAW 929
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
L L+K+G D Q +M+ C DS + +++ +++
Sbjct: 930 KILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSI 971
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/552 (23%), Positives = 222/552 (40%), Gaps = 68/552 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ T NA++ +++ + A M + C+ + ++Y ILI G+ V EA
Sbjct: 209 GMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREA 268
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L LV M G + N++ YT+LI G C R+ + +L+ M R V P+ T +++ G
Sbjct: 269 LVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDG 328
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A + + N+L+Y L + EA +L RG+ P
Sbjct: 329 YCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKL-DEAEELLNGAIARGFTPT 387
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + +++ + I K Y +L+ L K R E LN
Sbjct: 388 VITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLN 447
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR------------------------- 279
+F + L NV Y +ID +CKV M+ A E+ +
Sbjct: 448 EMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDK 507
Query: 280 ----------EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+M++ I P ++ + TLI G CK E L M+ + G PD+ +N
Sbjct: 508 KLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYN 567
Query: 330 SMIDCLCRAHRFEDALDCL--------------------------------SEMVEWGVP 357
+ D LC++ R E+A L +MV G
Sbjct: 568 VLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCK 627
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
+ TY++L+++LC + +L + +M + +I + +I + K + A+
Sbjct: 628 ADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSL 687
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F M++ G +P +Y+ I + K G+ +EA+ ME++G PD T ++ +
Sbjct: 688 FNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGH 747
Query: 478 QGRFEEAHDIVK 489
G + A +K
Sbjct: 748 MGYMDRAFSTLK 759
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/525 (23%), Positives = 231/525 (44%), Gaps = 43/525 (8%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
S + YN + +L++ + + + + + PD TYN +I C+ G + A R
Sbjct: 143 SPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYF 202
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF-- 126
+ G + YT L+ G+C + + +L +M NE + L+ G++
Sbjct: 203 CLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEA 262
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLPES 185
RC+ + +L+ M ++ + L TLL + L +A +L +M RG +P
Sbjct: 263 RCV---REALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSV 319
Query: 186 STF-------------------------------DYTVTCLVTGL---DLNETCGILDTF 211
T+ D+T L+ GL L+E +L+
Sbjct: 320 WTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGA 379
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
I RG P T+ L+ KA R + R +++ ++ +Y ++I+ K +
Sbjct: 380 IARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRL 439
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
A E EM +APN+V + ++I G+CK V E+ ++ G P+ +T+ S+
Sbjct: 440 KEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSL 499
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
I L + + A+ +++M E G+ P I Y LI+ C + + RLF+ M+ + +
Sbjct: 500 IYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGL 559
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
+PD +N L + C+ +AE+A+ ++ G+ +Y++L+ K+G D A
Sbjct: 560 TPDEQAYNVLTDALCKSG---RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAV 616
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M GC D YT +++L+ L +Q + EA I+ G+
Sbjct: 617 LIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGV 661
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 123/261 (47%), Gaps = 1/261 (0%)
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
V+ + + V RLV + YN+ + + +M + ++ + + P+ VT+NT+
Sbjct: 126 VDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTM 185
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
I +CK + +L E G + D +T N+++ CR A L M G
Sbjct: 186 IMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGC 245
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
N +Y ILI+ L V +L L M D S +++ + LI+ C+ +I A
Sbjct: 246 RRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARG 305
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
M G+ P ++Y+A+I KSGR +A MEQNGCNPD +T N ++ L
Sbjct: 306 LLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC 365
Query: 477 QQGRFEEAHDIVKTSKERGIS 497
G+ +EA +++ + RG +
Sbjct: 366 -GGKLDEAEELLNGAIARGFT 385
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 356 VPPNTITYNILIRSLCAIGDVARSLR-LFQKMQADR--------ISPDIYTFNALIQSFC 406
P N Y+ L+ S+ + A +R +QA R +SP Y N ++S
Sbjct: 101 APAN---YDKLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCY--NLALRSLL 155
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R + E K + ++ GL PD +Y+ +I A K G A + F + ++G D+Y
Sbjct: 156 RFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTY 215
Query: 467 TSNLIL 472
T N +L
Sbjct: 216 TCNALL 221
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 208/472 (44%), Gaps = 44/472 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PST + V+ L+ A F++M+ D PD FTYN LIH C+ + EA
Sbjct: 362 GLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMA-DSGLPDVFTYNNLIHWHCQAHKLREA 420
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M+ G P++ TY L+ G+C + E ++ M PN T +L+ G
Sbjct: 421 LNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRG 480
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
D A+ LL + + CN
Sbjct: 481 YIAKKDFDNAYALLDEMKQ-----NGVSCN------------------------------ 505
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
DYT L+ G+ + E G+L +F+ G P TY ++ KAG
Sbjct: 506 ----DYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAF 561
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + L N+ +Y ID +C+ D A ++ ++R R + P++V +N LI+G
Sbjct: 562 TVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGF 621
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C++ + +LLV+LL+ G P+ +NS+I + ++ M++ G+ +T
Sbjct: 622 CQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADT 681
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
TY LI G+VA +L L+ +M A PD +TF AL CR I+ A+K
Sbjct: 682 STYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEE 741
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
M L +RP+ F Y+ LI ++ + EA + M G PD T ++++
Sbjct: 742 MRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 213/460 (46%), Gaps = 10/460 (2%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F++ D P + Y +LI G ++G+ +A L +QM G G P+ + ++++ G N
Sbjct: 320 FKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLN 379
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF--MEREPLTQK 150
+R + + E M + + P+ T +L+H + C HK E L F M++ +
Sbjct: 380 DRRWKDAVCLFEEMADSGL-PDVFTYNNLIH--WHC-QAHKLREALNLFDRMKKAGVKPS 435
Query: 151 L-VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ N+LL EA + +M G+ P T+ + + D + +LD
Sbjct: 436 INTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLD 495
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+ GV TY +L+ + R E D L + + + +YN +I+ F K
Sbjct: 496 EMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAG 555
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
MM A + ++MR++ + PN++T+ + I G+C+ ++L + G +PD +N
Sbjct: 556 MMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYN 615
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++I+ C+ AL L +++ G+ PNT+ YN LI + + + ++ M
Sbjct: 616 ALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKG 675
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
I D T+ LI F + + A + + M+ G PD F+++AL L +SG D A
Sbjct: 676 GIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGA 735
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA---HD 486
K+ M + P+ + N+++ ++ + +EA HD
Sbjct: 736 KKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHD 775
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 125/499 (25%), Positives = 212/499 (42%), Gaps = 7/499 (1%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQM---SVDQCKPDRFTYNILIHGICRIGVVD 62
I P R+Y I AL K A ++M D C FTY ++ + + G ++
Sbjct: 223 IDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCD---FTYRTMVDVLVKTGRME 279
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EALR+ +M G +V T L+ G+C + V + + + + P + L+
Sbjct: 280 EALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLI 339
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G + KA+EL + + L + +L L N+ +A + +M D G L
Sbjct: 340 RGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSG-L 398
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ T++ + L E + D K GVKP +TY L+ K G E +
Sbjct: 399 PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKL 458
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + + NV +Y ++ + D A + EM+ ++ N T+N LI+G C
Sbjct: 459 YSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICM 518
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
V + +L + GF P T+NS+I+ +A A +M E G+PPN IT
Sbjct: 519 VDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIIT 578
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y I C G +L++ ++ + PDI +NALI FC+ + A + +L
Sbjct: 579 YTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILL 638
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
GL P+ Y++LI E + + SM + G D+ T +++ + G
Sbjct: 639 KDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVA 698
Query: 483 EAHDIVKTSKERGISFKSF 501
A ++ +G +F
Sbjct: 699 FALELYSEMMAKGYIPDAF 717
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 216/485 (44%), Gaps = 1/485 (0%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
+++A++ A +K + A F +M + PD+ Y + I +C++G ALR++++M
Sbjct: 194 MFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREM 253
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
+ +G+ +TY ++D R+ E RV + M++ + +L+ G +
Sbjct: 254 KEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEV 313
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
A L ++ + K++ L+ M +A + R+M +G LP +
Sbjct: 314 GNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLV 373
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ L+ + + + G+ P TY L+ +A + E + + K +
Sbjct: 374 LKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGV 432
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
++N+YN ++ +CK MD A ++ EM PN+VT+ TL+ G+ +
Sbjct: 433 KPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYA 492
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
LL + + G + +T+N +I+ +C R + L + G P +TYN +I
Sbjct: 493 LLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFV 552
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
G + + ++Q+M+ + P+I T+ + I +CR + A K + GL+PD
Sbjct: 553 KAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIV 612
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
+Y+ALI + G A Q + + ++G P++ N ++ +E ++
Sbjct: 613 AYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESM 672
Query: 492 KERGI 496
+ GI
Sbjct: 673 IKGGI 677
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 157/343 (45%), Gaps = 3/343 (0%)
Query: 156 LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT-CLVTGLDLNETCGILDTFIKR 214
LL R + S A +A A+ +M RGY ++ FD ++ CL G+ + + D
Sbjct: 163 LLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMH-EDAVRLFDEMPGA 221
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
+ P Y L + AL K G R L + + + +Y ++D K M+ A
Sbjct: 222 EIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEA 281
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ EMRD +++ TL+ G+C EV L L+ G P K + +I
Sbjct: 282 LRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRG 341
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
+ + A + +M G+ P+T +++++ L ++ LF++M AD PD
Sbjct: 342 CDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEM-ADSGLPD 400
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
++T+N LI C+ +K+ +A F M G++P +Y++L+ K G DEA + +
Sbjct: 401 VFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYS 460
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M G P+ T ++ + + F+ A+ ++ K+ G+S
Sbjct: 461 EMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVS 503
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 195/472 (41%), Gaps = 17/472 (3%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
+ M PD + L+ R +AL L +M G GY + + + L+
Sbjct: 145 YAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLK 204
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
+ R+ + M + P++ + + + D +A +L E T
Sbjct: 205 EGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFT 264
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV-TCLVTGLDLNETCG-ILDT 210
T++ L EA + +M D G D V T L+ G L + G L+
Sbjct: 265 YRTMVDVLVKTGRMEEALRVNDEMRDAG-----KKMDVIVATTLMRGYCLRQEVGNALNL 319
Query: 211 F---IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
F +K G+ P Y +L+ + G + + L+ + ++V+
Sbjct: 320 FKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLN 379
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM---LLECGFKPD 324
A + EM D + P++ T+N LI HC + HK RE L + + + G KP
Sbjct: 380 DRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHC---QAHKLREALNLFDRMKKAGVKPS 435
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
T+NS++ C+ ++A+ SEM G PN +TY L+R A D + L
Sbjct: 436 INTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLD 495
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+M+ + +S + YT+N LI C ++++ + + S ++ G P +Y+++I +K+G
Sbjct: 496 EMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAG 555
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
A + M + G P+ T ++ + G + A ++ + RG+
Sbjct: 556 MMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGL 607
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 124/295 (42%), Gaps = 37/295 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN++I+ VK+ + A+ +QQM P+ TY I G CR G D A
Sbjct: 536 GFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMA 595
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+++ + G P++ Y LI+GFC ++ ++L I+ + + PN SL+ G
Sbjct: 596 LKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITG 655
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
++ L+ K M + + TL+ S + + A + +M +GY+P
Sbjct: 656 -YKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIP 714
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ TF L D++ +L+ + V+P
Sbjct: 715 DAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRP------------------------- 749
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
NV YNM+I+ + + + A + EM + I P+ T++ L+S
Sbjct: 750 ----------NVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVS 794
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 63/122 (51%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI T Y +ID K ++ A + +M PD FT+ L HG+CR G +D A
Sbjct: 676 GIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGA 735
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L+++M L PNV+ Y +LI+G+ ++ E FR+ + M + P++ T LV
Sbjct: 736 KKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSK 795
Query: 125 VF 126
F
Sbjct: 796 KF 797
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 100/246 (40%), Gaps = 35/246 (14%)
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
AT+ M R + P++ + L+ + + L + + G++ D + F++++
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM------- 386
+ EDA+ EM + P+ Y + I +LC +GD R+LR+ ++M
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260
Query: 387 -------------------QADRISP---------DIYTFNALIQSFCRMNKIEKAEKAF 418
+A R++ D+ L++ +C ++ A F
Sbjct: 261 CDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLF 320
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
L G+ P Y LI+ + G +A + M G P ++ +L+L+ L+
Sbjct: 321 KETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLND 380
Query: 479 GRFEEA 484
R+++A
Sbjct: 381 RRWKDA 386
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 136/520 (26%), Positives = 235/520 (45%), Gaps = 52/520 (10%)
Query: 8 PSTRLYNAVIDAL-VKSNSID-LAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
P YN +I+A ++ + D L +L M + CKP T++ +I C G V EA
Sbjct: 311 PDVYAYNILINAYRIRGRTSDALGFLHL--MIKNGCKPSLITFSTIITAFCNEGNVVEAR 368
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
++ + ++ +G +PNV Y L+ G+ A+ V + + E M+++ + P+ AT LV G
Sbjct: 369 KIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGN 428
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA-----SEAAAILRKMGDRG 180
++ ++EL R+ LV + LY +S + EA L M ++G
Sbjct: 429 YKYGKEADSYELF-----RDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKG 483
Query: 181 YLPESSTFDYTV-----------------------------TC--LVTGLD----LNETC 205
P F+ + TC ++ GL L E
Sbjct: 484 MPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEAR 543
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR-LVSNVNSYNMVIDC 264
+L I +G+ + +L++ +K G D G L + + R + + +++ ID
Sbjct: 544 DLLYKMIDKGLPVNKVAFTVLLDGYFKVG-DTAGAHSLWYEMEARGICPDAIAFSAFIDG 602
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
K +++ A E EM + PN +N+LI G C ++H+ +L + + G PD
Sbjct: 603 LSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPD 662
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
FT N +I+ C+ R + A D +EM GV P+T+TYN LI C + D+ +
Sbjct: 663 IFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLN 722
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
KM A PDI T+N IQ FC KI +A ++ +G+ P+ +Y+ ++ A + +
Sbjct: 723 KMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNA-VCTD 781
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
D A + + P+ T+N++L +QG E+A
Sbjct: 782 MLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKA 821
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 203/444 (45%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
C+PD + YNILI+ G +AL + M G P++ T++ +I FCN V E
Sbjct: 309 CEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEAR 368
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
++ E ++E + PN A +L+ G F+ D +A L ++ N L+
Sbjct: 369 KIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGN 428
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
+++ + R +P+ S +D +V L L+E L+ +++G+ P
Sbjct: 429 YKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSV 488
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
+ ++ A +AG + + + LV + ++ + ++ K + A ++ +
Sbjct: 489 VAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYK 548
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M D+ + N V F L+ G+ K + L + G PD F++ ID L +A
Sbjct: 549 MIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGL 608
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
E+A + SEM + G PN YN LI LC G + +L+L ++M+ + PDI+T N
Sbjct: 609 VEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNI 668
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
+I FC+ +++ A AF M +G+ PD +Y+ LI K A + M +G
Sbjct: 669 IINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASG 728
Query: 461 CNPDSYTSNLILETLVQQGRFEEA 484
+PD T N+ ++ + A
Sbjct: 729 WDPDITTYNIRIQGFCSSQKISRA 752
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/501 (23%), Positives = 226/501 (45%), Gaps = 49/501 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ PS+ + + L++ + + M D +P +NI+I C+ G +
Sbjct: 237 VGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRV 296
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+ M P+VY Y ILI+ + R ++ L +M + P+
Sbjct: 297 AESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPS--------- 347
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
LI F +T++ N EA I + + G P
Sbjct: 348 --------------LITF------------STIITAFCNEGNVVEARKIFEGIQEVGLSP 381
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ ++ D+ + + + +G+ P +T+ +L+ YK G+ E D Y
Sbjct: 382 NVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGK--EADSY- 438
Query: 244 NHVFKD----RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+F+D LV + + Y++ + C +D A + +M ++ + P++V FN++I+
Sbjct: 439 -ELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAA 497
Query: 300 HCK---DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ + + HK ++++M G P T +SM+ L + R ++A D L +M++ G+
Sbjct: 498 YSRAGFEDNAHKAYKIMLMF---GLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGL 554
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
P N + + +L+ +GD A + L+ +M+A I PD F+A I + +E+A +
Sbjct: 555 PVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYE 614
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
AF M G P+NF Y++LI L G+ EA + M Q G PD +T+N+I+
Sbjct: 615 AFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFC 674
Query: 477 QQGRFEEAHDIVKTSKERGIS 497
++GR + A D G++
Sbjct: 675 KEGRMKSAFDAFAEMHHIGVT 695
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 105/458 (22%), Positives = 183/458 (39%), Gaps = 75/458 (16%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I +G+SP+ +YN ++ K+ + A + +++M PD T+NIL+ G + G
Sbjct: 374 IQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGK 433
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
++ L + P+ Y + + G C A ++ E + LE M E+ + P+ S
Sbjct: 434 EADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNS 493
Query: 121 LVHGVFRCL---DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
++ R + HKA+++++ F + C+++L LS EA +L KM
Sbjct: 494 VIAAYSRAGFEDNAHKAYKIMLMF---GLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMI 550
Query: 178 D-----------------------------------RGYLPESSTFDYTVTCLVTGLDLN 202
D RG P++ F + L +
Sbjct: 551 DKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVE 610
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
E K+G P Y L+ L G+ E + + + L+ ++ + N++I
Sbjct: 611 EAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIII 670
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
+ FCK M A + EM + P+ VT+NTLI G+CK ++ E L + G+
Sbjct: 671 NGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWD 730
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY------------------- 363
PD T+N I C + + A+ L E++ GV PNT+TY
Sbjct: 731 PDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTDMLDRAMVLT 790
Query: 364 ---------------NILIRSLCAIGDVARSLRLFQKM 386
N+L+ C G ++L QK+
Sbjct: 791 AKLLKMAFVPNVVTTNVLLSHFCKQGMPEKALIWGQKL 828
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 179/410 (43%)
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
L+ GF N++ E +L M+E V P+ + + L + R D ++LL +
Sbjct: 214 LMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDG 273
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
P N ++ A ++L M P+ ++ + ++
Sbjct: 274 PRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDAL 333
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
G L IK G KP T+ ++ A G VE + + + L NV YN ++ +
Sbjct: 334 GFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGY 393
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
K + +A + EMRD+ IAP+ TFN L++G+ K + + EL PD
Sbjct: 394 FKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDC 453
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
++ + LC A + ++A+ L +M+E G+PP+ + +N +I + G + + ++
Sbjct: 454 SLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKI 513
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M + P T ++++ + ++++A + M+ GL + +++ L+ K G
Sbjct: 514 MLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGD 573
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
A + ME G PD+ + ++ L + G EEA++ ++G
Sbjct: 574 TAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKG 623
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 157/345 (45%)
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
+ NTL+ N+ MA E+ IL +M + G P SS L+ D +L
Sbjct: 210 ILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGM 269
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
I+ G +P + +++ + G + L + K +V +YN++I+ +
Sbjct: 270 IRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRT 329
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
A M P+L+TF+T+I+ C + V + R++ + E G P+ +N++
Sbjct: 330 SDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTL 389
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
+ +A A EM + G+ P+ T+NIL+ G A S LF+ +
Sbjct: 390 MSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSL 449
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
PD ++ + C ++++A + ML G+ P +++++I A ++G D A +
Sbjct: 450 VPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHK 509
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ M G P S T + +L L ++GR +EA D++ ++G+
Sbjct: 510 AYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGL 554
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 107/248 (43%), Gaps = 3/248 (1%)
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ NH + S+ + N ++ F M + EI MR+ + P+ + L
Sbjct: 198 WANH---HKYESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLL 254
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ + +LL ++ G +P FN MI C C+ A L M ++ P+
Sbjct: 255 RVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVY 314
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
YNILI + G + +L M + P + TF+ +I +FC + +A K F +
Sbjct: 315 AYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGI 374
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+GL P+ Y+ L+ K+ +A + M G PD T N+++ + G+
Sbjct: 375 QEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKE 434
Query: 482 EEAHDIVK 489
+++++ +
Sbjct: 435 ADSYELFR 442
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
++ D N+++ + ++L+ LS M E GV P++ +IL R L +GD
Sbjct: 204 YESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVW 263
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
+L + M D P + FN +I FC+ + AE F M PD ++Y+ LI A
Sbjct: 264 KLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAY 323
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
GR +A M +NGC P T + I+ +G EA I + +E G+S
Sbjct: 324 RIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLS 380
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 88/204 (43%)
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
NTL+ G +++ E+L + E G +P + + L R + L M+
Sbjct: 212 NTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIR 271
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
G P +NI+I C G + + L M PD+Y +N LI ++ +
Sbjct: 272 DGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSD 331
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A M+ G +P ++S +I A G EA++ F +++ G +P+ N ++
Sbjct: 332 ALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMS 391
Query: 474 TLVQQGRFEEAHDIVKTSKERGIS 497
+ +A+ + + +++GI+
Sbjct: 392 GYFKARDVCQANMLYEEMRDKGIA 415
>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
Length = 648
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 127/523 (24%), Positives = 242/523 (46%), Gaps = 27/523 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN +ID K +D AY F +M PD TYN LI G+C+ + ++
Sbjct: 59 GLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKS 118
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R+++QM G PN TY LI G+ A E RV + M + P S +H
Sbjct: 119 ERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHA 178
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R +A ++ + + P + +TLL+ + + +++ M +G +P
Sbjct: 179 LCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPN 238
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F+ + +++ I + +G+ P T+ ++ +L + GR + N
Sbjct: 239 HRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFN 298
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT-FNTLISGHCKD 303
H+ + + Y +I C + +A E+ EM ++DI P V F+++I+ K+
Sbjct: 299 HMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKE 358
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL--------------- 348
V + ++++ ++++ G +P+ TFNS+++ C E+AL L
Sbjct: 359 GRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLMLWHQLALNRIVTYM 418
Query: 349 -----------SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
EM+E G + TY +++ LC + L +K+ A + DI T
Sbjct: 419 ARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 478
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
FN +I + ++ + ++A++ F ++ T GL P +Y+ +I LIK ++EA F+S+E
Sbjct: 479 FNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVE 538
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
++G PDS N I+ L+++ +A + + E ++ ++
Sbjct: 539 KSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEA 581
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 130/556 (23%), Positives = 233/556 (41%), Gaps = 99/556 (17%)
Query: 3 FLGISPSTRLYNAVIDAL-VKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
L + PST ++ID L + +LA F ++ PD +YN LI G + G V
Sbjct: 22 LLMLPPSTPT-TSLIDVLPAECTGPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEV 80
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
D+A L +M +P+V TY LIDG C K + + RVLE M + + PN T SL
Sbjct: 81 DKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSL 140
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++G S M E+ + ++M G
Sbjct: 141 IYG-----------------------------------YSTAGMWKESVRVFKEMSSSGL 165
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P + + L + E I D+ + +G KP +Y L+ G +
Sbjct: 166 IPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNS 225
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS--- 298
+N + +V N +N++I+ + + MMD+A I +M+++ + P+ VTF T+IS
Sbjct: 226 LVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 285
Query: 299 --------------------------------GHCKDAEVHKTRELLVMLLECGFKPDKF 326
G C E+ K +EL+ ++ P
Sbjct: 286 RIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 345
Query: 327 T-FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL----- 380
F+S+I+ L + R + D + MV+ G PN +T+N L+ C +G++ +L
Sbjct: 346 KYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLML 405
Query: 381 ---------------------RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
++F +M + I T+ ++ CR N ++A
Sbjct: 406 WHQLALNRIVTYMARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLE 465
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+ + ++ D +++ +I A++K GR EAK+ F ++ G P +T NL++ L+++
Sbjct: 466 KLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEE 525
Query: 480 RFEEAHDIVKTSKERG 495
+EEA ++ + ++ G
Sbjct: 526 SYEEADNLFISVEKSG 541
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 167/405 (41%), Gaps = 47/405 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ R +N +I+A + +D A L F+ M PD T+ +I +CRIG +D+A
Sbjct: 234 GIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 293
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L M +G P+ Y LI G CN + + ++ M +++ P G
Sbjct: 294 LHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPP---------PG 344
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
V K F +I + +E +E I+ M G P
Sbjct: 345 V-------KYFSSIINNLFKE------------------GRVAEGKDIMDLMVQTGQRPN 379
Query: 185 SSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
TF+ + CLV ++ E L + + + R TY+ A R +
Sbjct: 380 VVTFNSLMEGYCLVGNME--EALHYLMLWHQLALN-RIVTYM--------ARRTTAAKKM 428
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + + ++ +Y +V+ C+ N D A + ++ ++ +++TFN +IS K
Sbjct: 429 FHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLK 488
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ +EL + G P T+N MI L + +E+A + + + G P++
Sbjct: 489 VGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRL 548
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
N ++R L +VA++ + + ++ + T + L F R
Sbjct: 549 LNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSR 593
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 90/181 (49%)
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
LL G PD ++N++ID + + A + +M+E V P+ +TYN LI LC +
Sbjct: 55 LLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKE 114
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+ +S R+ ++M I P+ T+N+LI + +++ + F M + GL P + ++
Sbjct: 115 MVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNS 174
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
I AL + R EAK F SM G P+ + + +L +G F + +V +G
Sbjct: 175 FIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKG 234
Query: 496 I 496
I
Sbjct: 235 I 235
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 356 VPPNTITYNIL--IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
+PP+T T +++ + + C ++A L +F ++ + PD+ ++N LI F + +++K
Sbjct: 25 LPPSTPTTSLIDVLPAECTGPELA--LAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDK 82
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A + F+ M+ + PD +Y++LI L K+ ++++ M G P++ T N ++
Sbjct: 83 AYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIY 142
Query: 474 TLVQQGRFEEAHDIVKTSKERGI 496
G ++E+ + K G+
Sbjct: 143 GYSTAGMWKESVRVFKEMSSSGL 165
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 65/343 (18%), Positives = 116/343 (33%), Gaps = 76/343 (22%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P T + VI +L + +D A KF M P Y LI G C G + +A
Sbjct: 269 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKA 328
Query: 65 LRLVKQM---------------------------EG---------LGYAPNVYTYTILID 88
L+ +M EG G PNV T+ L++
Sbjct: 329 KELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLME 388
Query: 89 GFCNAKRVAEVF------------RVLEIMKERNVCPNE---------ATVRSLVHGVF- 126
G+C + E R++ M R + TV +GV
Sbjct: 389 GYCLVGNMEEALHYLMLWHQLALNRIVTYMARRTTAAKKMFHEMIESGTTVSIQTYGVVL 448
Query: 127 ------RCLDP-----HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
C D K F + ++F + +T +V + +L EA +
Sbjct: 449 GGLCRNNCTDEANMLLEKLFAMNVKF---DIITFNIVISAML----KVGRRQEAKELFAA 501
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
+ G +P T++ ++ L+ E + + K G P ++ L K
Sbjct: 502 ISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAE 561
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
+ YL+ + ++ L ++ +++ F + + +E C
Sbjct: 562 VAKASNYLSIIDENNLTLEASTISLLASLFSREDTQREPSETC 604
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 206/476 (43%), Gaps = 5/476 (1%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
+ RLYN +IDAL++ N + L M D +P+ FTYN+L+ +C+ V A +++
Sbjct: 133 APRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKML 192
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
+M G P+ TY ++ C RV E VL P A+ +++ + R
Sbjct: 193 DEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAP-----PVAASYNAVILALCRE 247
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+ F ++ + R + T++ A AIL +M G P +TF
Sbjct: 248 FRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATF 307
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
V L +++ + + G P +Y +L+ L G LN + +
Sbjct: 308 TALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQ 367
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
N +Y+ +ID F K +D A I +M PN+V + ++ CK ++
Sbjct: 368 HGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQ 427
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
L+ +L P+ TFN++I LC R AL EM G PPN TYN L+
Sbjct: 428 AESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLH 487
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
L G+ +L++ +MQ I + T+N ++ C+M +A M+ G++P
Sbjct: 488 GLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQP 547
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
D F+++A+I A K G A +M C + +++ L Q + E+A
Sbjct: 548 DAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDA 603
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 212/470 (45%), Gaps = 9/470 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN ++ AL +++ + A +M+ C PD TY ++ +C +G VDEA
Sbjct: 164 GVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEA 223
Query: 65 LRLVKQMEGLGYAPNVY-TYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
E L AP V +Y +I C R+ EVF V+ M R + PN T ++V+
Sbjct: 224 ------TEVLSAAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVN 277
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + A +L R + L+ L N+ +A + + M G+ P
Sbjct: 278 AFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAP 337
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD-RY 242
+ +++ + L + DL +L+ + G P TY L++ KAG D++G
Sbjct: 338 STVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAG-DLDGAISI 396
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
N + + NV Y ++ FCK M ++A + +M + PN VTFNTLI C
Sbjct: 397 WNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCN 456
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
V + + + G P+ T+N ++ L R DAL + EM G+ + +T
Sbjct: 457 CRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVT 516
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN ++ LC + ++ +M I PD +TF A+I ++C+ ++ A +M
Sbjct: 517 YNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMN 576
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
+ + Y+ L+ L + ++A L M G P++ T N+++
Sbjct: 577 VVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLV 626
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 168/397 (42%), Gaps = 10/397 (2%)
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME----REPLTQKLVCNTLLY 158
L+ M+ R V E + + V R P +A + R + P +L N L+
Sbjct: 84 LQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTAPRLY-NHLID 142
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
L +M A + M G P T++ V L + +LD +G P
Sbjct: 143 ALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPP 202
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
TY ++ AL GR E L+ SYN VI C+ M +
Sbjct: 203 DDVTYGTIVSALCTLGRVDEATEVLSAA-----PPVAASYNAVILALCREFRMQEVFAVV 257
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
+M R + PN++T+ T+++ CK E+ +L ++ G P+ TF +++ L
Sbjct: 258 GDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFND 317
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
R DALD MV G P+T++YN+LIR LC++GD+ + + M+ P+ T+
Sbjct: 318 GRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTY 377
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+ LI F + ++ A + M G +P+ Y+ ++ K F++A+ M
Sbjct: 378 STLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLV 437
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
C P++ T N ++ +L R A + + G
Sbjct: 438 ENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHG 474
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/498 (22%), Positives = 200/498 (40%), Gaps = 12/498 (2%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR-L 67
+ R + A + L + +D L+ Q+M + + R G D AL+
Sbjct: 60 AARAHEAAVRRLAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTF 119
Query: 68 VKQMEGLG----YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ + LG AP +Y + LID V V V M++ V PN T LV
Sbjct: 120 YRAVHDLGCARPTAPRLYNH--LIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVR 177
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + A ++L + + T++ L EA +L P
Sbjct: 178 ALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAP-----P 232
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+++++ + L + E ++ + RG++P TY ++ A KAG L
Sbjct: 233 VAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAIL 292
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ NV ++ ++ + A ++ + M AP+ V++N LI G C
Sbjct: 293 ARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSV 352
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ +L + + G P+ T++++ID +A + A+ ++M G PN + Y
Sbjct: 353 GDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVY 412
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
++ C ++ L KM + P+ TFN LI+S C ++ +A F M
Sbjct: 413 TNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRR 472
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G P+ +Y+ L+ L + G +A Q + M+ +G T N ++ L Q E
Sbjct: 473 HGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGRE 532
Query: 484 AHDIVKTSKERGISFKSF 501
A V RGI +F
Sbjct: 533 AMFFVGRMIVRGIQPDAF 550
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI S YN V+ L + A +M V +PD FT+ +IH C+ G V A
Sbjct: 509 GIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMA 568
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ M + N+ YTIL+ CN ++ + L M + PN T LV G
Sbjct: 569 AWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRG 628
Query: 125 VFR---CLDP 131
VFR C +P
Sbjct: 629 VFRNLGCNNP 638
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 213/461 (46%), Gaps = 40/461 (8%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PST NA++ LV + +DLA F+ + PD +T+N +I G+CRIG + +A +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV---LEIMKERNVCPNEATVRSLVHG 124
K ++ G AP+V TY LIDG+C ++ V L+ M E + P T L++G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A + ++ + N+L+ L + E ++ +M D G P
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF C++ G F K+G+ + ++ M R+VE D
Sbjct: 334 EITFG----CVLKG------------FCKKGMMADANDWIDGMTE-----RNVEPD---- 368
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
V Y ++ID + ++ M+ A + M + I+PN+ T+N LI+G +
Sbjct: 369 ----------VVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ LL + E G + D T+N +I LC A+ L EM E G+ PN +TYN
Sbjct: 419 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYN 478
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I+ C G++ + + +M+ R ++ T+N I+ FC++ K+++A ML
Sbjct: 479 TIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDK 538
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
L P+ +Y + + +++ G + + +S Q NP S
Sbjct: 539 CLVPNGITYETIKEGMMEKGYTPDIRGCTVS--QASENPAS 577
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 187/438 (42%), Gaps = 32/438 (7%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
+P + N L+ G+ VD A + + +P++YT+ +I G C ++ +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
V + +K + P+ AT SL+ G + + + +
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM---------------------- 250
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
+L++M + G P + TF + + + + ++G+
Sbjct: 251 ----------LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVV 300
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
TY L+ L G+ EG + + + L N ++ V+ FCK MM A + M
Sbjct: 301 TYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGM 360
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+R++ P++V + LI G+ + ++ + + + G P+ T+N +I R+ +
Sbjct: 361 TERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDW 420
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
A L EM E G+ + +TYN+LI +LC G+V ++++L +M + P+ T+N +
Sbjct: 421 RSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
IQ FC I+ A + M R + +Y+ IK + G+ DEA M
Sbjct: 481 IQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCL 540
Query: 462 NPDSYTSNLILETLVQQG 479
P+ T I E ++++G
Sbjct: 541 VPNGITYETIKEGMMEKG 558
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 169/382 (44%), Gaps = 9/382 (2%)
Query: 113 PNEATVRSLVHGVF---RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEA 169
P+ ++V +L+ G+ R KAF +R R NT++ L +A
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALR---RRVSPDIYTFNTVISGLCRIGQLRKA 210
Query: 170 AAILRKMGDRGYLPESSTFDYTVT--CLVTGL-DLNETCGILDTFIKRGVKPRFSTYLLL 226
+ + + G P +T++ + C G ++ +L ++ G+ P T+ +L
Sbjct: 211 GDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVL 270
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ K R + + + ++V +YN +I C ++ ++ EM D +
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
+PN +TF ++ G CK + + + + E +PD + +ID R + EDA+
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMA 390
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
M + G+ PN TYN LI GD + L +M+ I D+ T+N LI + C
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALC 450
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
++ KA K M +GL P++ +Y+ +I+ G A + ME+ +
Sbjct: 451 CKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVV 510
Query: 467 TSNLILETLVQQGRFEEAHDIV 488
T N+ ++ Q G+ +EA+D++
Sbjct: 511 TYNVFIKYFCQIGKMDEANDLL 532
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 166/381 (43%), Gaps = 46/381 (12%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAY---LKFQQMSVDQCKPDRFTYNILIHGICR 57
I G++PS YN++ID K Y + ++M P T+ +LI+G C+
Sbjct: 217 IKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCK 276
Query: 58 IGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
A+R+ ++M+ G A +V TY LI G C+ +V E +++E M++ + PNE T
Sbjct: 277 NSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEIT 336
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
++ G + A + + ER ++ L+ +A A+ M
Sbjct: 337 FGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMA 396
Query: 178 DRGYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
+G P +T++ CL+TG D G+LD ++G++
Sbjct: 397 KKGISPNVTTYN----CLITGFSRSGDWRSASGLLDEMKEKGIE---------------- 436
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
++V +YN++I C + +A ++ EM + + PN +T+
Sbjct: 437 -------------------ADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTY 477
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
NT+I G C + E+ + +C + + T+N I C+ + ++A D L+EM++
Sbjct: 478 NTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD 537
Query: 354 WGVPPNTITYNILIRSLCAIG 374
+ PN ITY + + G
Sbjct: 538 KCLVPNGITYETIKEGMMEKG 558
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 122/247 (49%), Gaps = 3/247 (1%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+ +S N ++ +D A + R R ++P++ TFNT+ISG C+ ++ K ++
Sbjct: 155 STSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVA 214
Query: 314 VMLLECGFKPDKFTFNSMIDCLCR---AHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+ G P T+NS+ID C+ A L EMVE G+ P +T+ +LI
Sbjct: 215 KDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGY 274
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C + A ++R+F++M+ I+ + T+N+LI C K+E+ K M LGL P+
Sbjct: 275 CKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNE 334
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
++ ++K K G +A M + PD ++++ + G+ E+A + +
Sbjct: 335 ITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEA 394
Query: 491 SKERGIS 497
++GIS
Sbjct: 395 MAKKGIS 401
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 147/319 (46%), Gaps = 7/319 (2%)
Query: 183 PESSTFDYTVTCLVTG--LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P +S+ + + LV +DL E + ++R V P T+ ++ L + G+ +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKA--FRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCK---VNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ L +V +YN +ID +CK M + +EM + I+P VTF LI
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
+G+CK++ + + + G T+NS+I LC + E+ + + EM + G+
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
PN IT+ +++ C G +A + M + PD+ + LI + R+ K+E A
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAV 391
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
+M G+ P+ +Y+ LI +SG + A M++ G D T N+++ L
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451
Query: 478 QGRFEEAHDIVKTSKERGI 496
+G +A ++ E G+
Sbjct: 452 KGEVRKAVKLLDEMSEVGL 470
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 153/321 (47%), Gaps = 18/321 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP+ + +I+ K+++ A F++M TYN LI G+C G V+E
Sbjct: 259 GISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEG 318
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+++ME LG +PN T+ ++ GFC +A+ ++ M ERNV P+ L+ G
Sbjct: 319 VKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDG 378
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+R L + + M ++ ++ + N L+ S + A+ +L +M ++G
Sbjct: 379 -YRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEA 437
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + L ++ + +LD + G++P TY +++ G
Sbjct: 438 DVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIR 497
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ K R +NV +YN+ I FC++ MD A ++ EM D+ + PN +T+ T+ G
Sbjct: 498 TRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG---- 553
Query: 304 AEVHKTRELLVMLLECGFKPD 324
++E G+ PD
Sbjct: 554 ------------MMEKGYTPD 562
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
RP S +AL+ L+ + R D A++ F S + +PD YT N ++ L + G+ +A D
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 487 IVKTSKERGIS 497
+ K K G++
Sbjct: 213 VAKDIKAWGLA 223
>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 589
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 216/457 (47%), Gaps = 1/457 (0%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
KPD +T I+I+ +C + ++ M +G P V T+ LI+G C VA R
Sbjct: 103 KPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAAR 162
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE-PLTQKLVCNTLLYRL 160
+ +++ N T ++++G+ + D A L + R L + +T++ L
Sbjct: 163 FADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSL 222
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
+ M EA + M +G P+ ++ + L E +L +++G+ P
Sbjct: 223 CKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNV 282
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
T+ +L++ K G + + + +V +YN VI C ++ M A ++
Sbjct: 283 QTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFEL 342
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M + PNLVT+++LI G CK ++K LL ++ G PD T++++I C+A +
Sbjct: 343 MIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGK 402
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
E A + M E PN T I++ L + ++ LF++M+ + ++ +N
Sbjct: 403 PEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNI 462
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
++ C K+ A++ F + + G++ D +Y+ +IK L K G D+A+ + ME+NG
Sbjct: 463 VLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENG 522
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
C P+ +T N+ + L+Q+ + + K +G+S
Sbjct: 523 CLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLS 559
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 208/477 (43%), Gaps = 13/477 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGI P +I+ L N + M P T+ LI+G+C G V
Sbjct: 100 LGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVAR 159
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN-----VCPNEATV 118
A R +E +G+ N YTY +I+G C A + LE +K RN V +
Sbjct: 160 AARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIM 219
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
SL C +A L + + N+L++ L N EA +L M
Sbjct: 220 DSLCKDGMVC----EALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMR 275
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+G +P TF+ V ++ I+ + GV+P TY ++ + +
Sbjct: 276 KGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGD 335
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + N+ +Y+ +I +CK +++A + EM + + P++VT++TLI
Sbjct: 336 AVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIG 395
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G CK + +EL + E P+ T ++D L + +A+ EM + +
Sbjct: 396 GFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLEL 455
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N + YNI++ +C+ G + + LF + + I D+ + +I+ C+ ++ AE
Sbjct: 456 NVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLL 515
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT--FLSMEQNGCNPDSYTSNLILE 473
M G P+ F+Y+ ++ L++ R+D ++ T L M+ G + D+ T+ L++
Sbjct: 516 MKMEENGCLPNEFTYNVFVRGLLQ--RYDISRSTKYLLLMKGKGLSADATTTELLIS 570
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 170/412 (41%), Gaps = 46/412 (11%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y+ ++D+L K + A F M+ +PD YN LIHG+C G EA L+ M
Sbjct: 215 YSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMM 274
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL--- 129
G PNV T+ +L+D FC ++ ++ M V P+ T S++ G CL
Sbjct: 275 RKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISG--HCLLSQ 332
Query: 130 --DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D K FEL+I +G+LP T
Sbjct: 333 MGDAVKVFELMIH--------------------------------------KGFLPNLVT 354
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + ++N+ +L + G+ P T+ L+ KAG+ +
Sbjct: 355 YSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMH 414
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ N+ + +++D K A + REM ++ N+V +N ++ G C +++
Sbjct: 415 EHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLN 474
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+EL L G K D + +MI LC+ +DA + L +M E G PN TYN+ +
Sbjct: 475 DAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFV 534
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
R L D++RS + M+ +S D T LI F NK A F
Sbjct: 535 RGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISYF-SANKENSALHVFL 585
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 1/189 (0%)
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
T L+ + G KPD +T +I+CLC + L M + GV P +T+ LI
Sbjct: 90 TISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLIN 149
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
LCA G+VAR+ R ++ + YT+ A+I C+ A +
Sbjct: 150 GLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDL 209
Query: 429 D-NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
D +YS ++ +L K G EA F M G PD N ++ L GR++EA +
Sbjct: 210 DVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTL 269
Query: 488 VKTSKERGI 496
+ +GI
Sbjct: 270 LGNMMRKGI 278
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 191/417 (45%), Gaps = 35/417 (8%)
Query: 59 GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
G + +A + MEGLG+ PNV +Y +I G+ + + R+L+ M+ + + P+ T
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
SL+ G+ + EA+ + KM +
Sbjct: 247 GSLISGMCK-----------------------------------EGRLEEASGLFDKMVE 271
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G +P + T++ + DL D +K+G+ P STY LL+ AL+ GR E
Sbjct: 272 IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGE 331
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
D + + K ++ + +YN++I+ + + RA ++ EM + I P VT+ +LI
Sbjct: 332 ADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIY 391
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
+ + + +L +L+ G PD FN+MID C E A L EM VPP
Sbjct: 392 VLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPP 451
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ +T+N L++ C G V + L +M+ I PD ++N LI + R I+ A
Sbjct: 452 DEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVR 511
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
ML++G P +Y+ALIK L K+ D A++ M G +PD T ++E +
Sbjct: 512 DEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 189/410 (46%), Gaps = 39/410 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P+ YN +I +I+ A M V +PD +TY LI G+C+ G ++E
Sbjct: 202 LGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEE 261
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L +M +G PN TY LIDG+CN + F + M ++ + P+ +T LVH
Sbjct: 262 ASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVH 321
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ FME EA ++++M +G +P
Sbjct: 322 AL---------------FME--------------------GRMGEADDMIKEMRKKGIIP 346
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ T++ + + + + + +G++P TY L+ L + R E D
Sbjct: 347 DAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLF 406
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +V +N +ID C ++RA + +EM + + P+ VTFNTL+ G C++
Sbjct: 407 EKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 466
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V + R LL + G KPD ++N++I R +DA EM+ G P +TY
Sbjct: 467 GKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTY 526
Query: 364 NILIRSLC--AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
N LI+ LC GD+A L ++M ISPD T+ +LI+ ++ +
Sbjct: 527 NALIKCLCKNQEGDLAE--ELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 574
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 196/401 (48%), Gaps = 8/401 (1%)
Query: 98 EVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTL 156
E+F L + ++R + + V L+ G + KA E I FME +V NT+
Sbjct: 162 ELFDELTLSRDR-LSVKSSIVFDLLEGKLK-----KAREF-IGFMEGLGFKPNVVSYNTI 214
Query: 157 LYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
++ S+ A IL M +G P+S T+ ++ + L E G+ D ++ G+
Sbjct: 215 IHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGL 274
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
P TY L++ G Y + + K ++ +V++YN+++ M A +
Sbjct: 275 VPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADD 334
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
+ +EMR + I P+ +T+N LI+G+ + + +L +L G +P T+ S+I L
Sbjct: 335 MIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLS 394
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
R +R ++A D ++++ GV P+ I +N +I CA G+V R+ L ++M + PD
Sbjct: 395 RRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEV 454
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
TFN L+Q CR K+E+A M G++PD+ SY+ LI + G +A M
Sbjct: 455 TFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEM 514
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G NP T N +++ L + + A +++K +GIS
Sbjct: 515 LSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGIS 555
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P YN +I + I A+ +M P TYN LI +C+ D A
Sbjct: 483 GIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLA 542
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE 98
L+K+M G +P+ TY LI+G N + E
Sbjct: 543 EELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 576
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 211/457 (46%), Gaps = 35/457 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ ++ A+ K D+ ++QM + + T NIL++ CR + AL
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LG+ P++ T+ L++GFC R+ + + + M E PN +++ G
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDG--- 195
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
L + A +L +M G P++ T
Sbjct: 196 --------------------------------LCKSKQVDNALDLLNRMEVDGIRPDAVT 223
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ ++ L ++ ++ KR + P T+ L++A K GR E + +
Sbjct: 224 YNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMI 283
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ L ++ +Y+++I C + +D A ++ M + P++VT++ LI+G+CK +V
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+L + + G + T+ +I CRA + A + MV GVPPN ITYN+L+
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLL 403
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G + ++L + MQ + DI T+N +I+ C+ ++ A + S+ GL
Sbjct: 404 HGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLT 463
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
PD ++Y+A++ L K G EA F M+++G P+
Sbjct: 464 PDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 198/429 (46%), Gaps = 35/429 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ LGI + N +++ + + + LA +M +PD T+ L++G CR
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDR 166
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ +AL + +M +GY PNV Y +IDG C +K+V +L M+ + P+ T S
Sbjct: 167 IYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNS 226
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G L N+ +A ++ M R
Sbjct: 227 LISG-----------------------------------LCNSGRWDDATRMVSCMTKRE 251
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ TF+ + V ++E + + I+R + P TY LL+ L R E +
Sbjct: 252 IYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + +V +Y+++I+ +CK ++ ++ EM R + N VT+ LI G+
Sbjct: 312 QMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGY 371
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ +++ E+ ++ CG P+ T+N ++ LC + E AL L++M + G+ +
Sbjct: 372 CRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADI 431
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TYNI+IR +C G+VA + L+ + ++PDI+T+ A++ + +A+ F
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRK 491
Query: 421 MLTLGLRPD 429
M G+ P+
Sbjct: 492 MKEDGILPN 500
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 206/459 (44%), Gaps = 37/459 (8%)
Query: 40 QCKP--DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVA 97
QC+P ++ L+ I ++ D + L +QM+ LG N+ T IL++ FC +++
Sbjct: 74 QCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLS 133
Query: 98 EVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL 157
L M + P+ T SL++G R + A + R +E
Sbjct: 134 LALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEM------------- 180
Query: 158 YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK 217
GY P ++ + L ++ +L+ G++
Sbjct: 181 ----------------------GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIR 218
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
P TY L+ L +GR + R ++ + K + +V ++N +ID K + A E+
Sbjct: 219 PDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEEL 278
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
EM R + P++VT++ LI G C + + + ++ ++ G PD T++ +I+ C+
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
+ + E + EM + GV NT+TY +LI+ C G + + +F+ M + P+I T
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIIT 398
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+N L+ C KIEKA M G+ D +Y+ +I+ + K+G +A + S+
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLN 458
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G PD +T ++ L ++G EA + + KE GI
Sbjct: 459 LKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGI 497
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 163/345 (47%)
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
CN LL S S A + L KM G+ P+ TF + G + + + D +
Sbjct: 119 CNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMV 178
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+ G +P Y +++ L K+ + LN + D + + +YN +I C D
Sbjct: 179 EMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWD 238
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
AT + M R+I P++ TFN LI K+ + + EL ++ PD T++ +I
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLI 298
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
LC R ++A MV G P+ +TY+ILI C V ++LF +M +
Sbjct: 299 YGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
+ T+ LIQ +CR K+ AE+ F M+ G+ P+ +Y+ L+ L +G+ ++A
Sbjct: 359 RNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVI 418
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M+++G + D T N+I+ + + G +A D+ + +G++
Sbjct: 419 LADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLT 463
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G+ P+ YN ++ L + I+ A + M D TYNI+I G+C+ G V
Sbjct: 389 FCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVA 448
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
+A L + G P+++TYT ++ G E + MKE + PNE V
Sbjct: 449 DAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPNECYV 504
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 136/530 (25%), Positives = 235/530 (44%), Gaps = 47/530 (8%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS Y +VI A VK ++D A +M D + LI G C+ + AL L
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNV---CPNEATVRSLVHG 124
+ME G +PN T+++LI+ F ++ E+ + LE K+ V P+ V +++ G
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWF---RKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQG 418
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +L E L VCNT+L L EA +L KM RG P
Sbjct: 419 WLKGQKHEEALKLFDESFET-GLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPN 477
Query: 185 SSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+++ + C +DL + +++G+KP TY +L++ ++ +
Sbjct: 478 VVSYNNVMLGHCRQKNMDLARI--VFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEV 535
Query: 243 LNH------------------------------------VFKDRLVSNVNSYNMVIDCFC 266
+NH + + RL + SYN +ID F
Sbjct: 536 VNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFF 595
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K MD A EM I+PN++T+ +L++G CK+ + + E+ + G K D
Sbjct: 596 KEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIP 655
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
+ ++ID C+ E A SE++E G+ P+ YN LI +G++ +L L++KM
Sbjct: 656 AYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM 715
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
D + D+ T+ LI + + A + + M +GL PD Y+ ++ L K G+F
Sbjct: 716 LKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQF 775
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ + F M++N P+ N ++ ++G +EA + ++GI
Sbjct: 776 VKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/498 (23%), Positives = 220/498 (44%), Gaps = 7/498 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L + P N + ALV+ NS+ A + +M D T +L+ R E
Sbjct: 192 LDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAE 251
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLV 122
AL ++ + G P+ Y++ + C +A +L MKE+ +C P++ T S++
Sbjct: 252 ALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVI 311
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY--RLSNNSMASEAAAILRKMGDRG 180
+ + A L + + ++ +V T L NN + S A + KM G
Sbjct: 312 LASVKQGNMDDAIRLKDEMLS-DGISMNVVAATSLITGHCKNNDLVS-ALVLFDKMEKEG 369
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P S TF + ++ + G+ P +++ K + E
Sbjct: 370 PSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEAL 429
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + F+ L +NV N ++ CK D ATE+ +M R I PN+V++N ++ GH
Sbjct: 430 KLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGH 488
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ + R + +LE G KP+ +T++ +ID R H ++AL+ ++ M + N
Sbjct: 489 CRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNG 548
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+ Y +I LC +G +++ L M + R+ ++N++I F + +++ A A+
Sbjct: 549 VVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYE 608
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M G+ P+ +Y++L+ L K+ R D+A + M+ G D +++ ++
Sbjct: 609 EMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRS 668
Query: 480 RFEEAHDIVKTSKERGIS 497
E A + E G++
Sbjct: 669 NMESASALFSELLEEGLN 686
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 201/442 (45%), Gaps = 2/442 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ LG++PS + +I +K + A LK S + + F N ++ +C+ G
Sbjct: 400 MEVLGLTPSVFHVHTIIQGWLKGQKHEEA-LKLFDESFETGLANVFVCNTILSWLCKQGK 458
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
DEA L+ +ME G PNV +Y ++ G C K + V + E+ + PN T
Sbjct: 459 TDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSI 518
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G FR D A E++ +V T++ L S+A +L M +
Sbjct: 519 LIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEK 578
Query: 181 YLPES-STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
L S +++ + +++ + G+ P TY LM L K R +
Sbjct: 579 RLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQA 638
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + + ++ +Y +ID FCK + M+ A+ + E+ + + P+ +N+LISG
Sbjct: 639 LEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISG 698
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ +L +L+ G + D T+ ++ID L + A + +EM G+ P+
Sbjct: 699 FRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPD 758
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
I Y +++ L G + +++F++M+ + ++P++ +NA+I R +++A +
Sbjct: 759 EIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHD 818
Query: 420 SMLTLGLRPDNFSYSALIKALI 441
ML G+ PD ++ L+ +
Sbjct: 819 EMLDKGILPDGATFDILVSGQV 840
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 152/349 (43%), Gaps = 2/349 (0%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
N LL S + A I+ +M + +P + T++ LV L E + +
Sbjct: 167 NYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVA 226
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
GV T LLM A + + E L+ + + Y++ + CK +
Sbjct: 227 IGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAM 286
Query: 274 ATEICREMRDRDI-APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + REM+++ + P+ T+ ++I K + L +L G + S+I
Sbjct: 287 ANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLI 346
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
C+ + AL +M + G PN++T+++LI G++ ++L ++KM+ ++
Sbjct: 347 TGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLT 406
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
P ++ + +IQ + + K E+A K F GL + F + ++ L K G+ DEA +
Sbjct: 407 PSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATEL 465
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
ME G P+ + N ++ +Q + A + E+G+ ++
Sbjct: 466 LSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNY 514
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 35/195 (17%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++PS +YN++I ++ A +++M D + D TY LI G+ + G + A
Sbjct: 684 GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILA 743
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +M+ +G P+ YT++++G + +V ++ E MK+ NV PN +++ G
Sbjct: 744 SELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAG 803
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+R + +AF L +M D+G LP+
Sbjct: 804 HYREGNLDEAFRL-----------------------------------HDEMLDKGILPD 828
Query: 185 SSTFDYTVTCLVTGL 199
+TFD V+ V L
Sbjct: 829 GATFDILVSGQVGNL 843
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 110/249 (44%), Gaps = 36/249 (14%)
Query: 289 NLVTFNTLISGHCKDAE----------------------VHKT-------------RELL 313
N FN L++ + KD + V++T +EL
Sbjct: 162 NSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELY 221
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++ G D T ++ R + +AL+ LS +E G P+++ Y++ +++ C
Sbjct: 222 SRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKT 281
Query: 374 GDVARSLRLFQKMQADRI-SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
D+A + L ++M+ ++ P T+ ++I + + ++ A + ML+ G+ + +
Sbjct: 282 LDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVA 341
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
++LI K+ A F ME+ G +P+S T ++++E + G E+A + K +
Sbjct: 342 ATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKME 401
Query: 493 ERGISFKSF 501
G++ F
Sbjct: 402 VLGLTPSVF 410
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 78/180 (43%), Gaps = 1/180 (0%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
GF+ + FN +++ + + + A+D +++M+E V P N + +L + +
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
L+ +M A + D T L+++ R K +A + + G PD+ YS ++A
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277
Query: 440 LIKSGRFDEAKQTFLSM-EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
K+ A M E+ C P T ++ V+QG ++A + GIS
Sbjct: 278 CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISM 337
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 129/517 (24%), Positives = 229/517 (44%), Gaps = 57/517 (11%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQ-QMSVDQCKPDRFTYNILIH------------ 53
+PS +N ++ L+K+ + L QM KPD FT +ILI+
Sbjct: 63 TPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAF 122
Query: 54 ---------GICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE 104
G+C G V+EAL + LG+ N TY ILI+G C + +VL
Sbjct: 123 SVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLR 182
Query: 105 IMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNS 164
++ + V N +++ G L +
Sbjct: 183 QIEGKLVNTNVVMYSTIIDG-----------------------------------LCKDK 207
Query: 165 MASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYL 224
+ ++A + +M + P TF + + + + + + + P T+
Sbjct: 208 LVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFN 267
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
+L++AL K G+ E + + K+ + V +YN ++D +C VN + +A + +
Sbjct: 268 ILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRM 327
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
+APN ++N +I+G CK V + L + G P K T+NS+ID LC+A R A
Sbjct: 328 RVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYA 387
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
+ + EM +P + +TYN LI C V +++ L +K++ I P++ T+N LI
Sbjct: 388 WELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDG 447
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
C+ +++ A+ F +L G + ++Y+ +I L K G FDEA+ ME NG PD
Sbjct: 448 LCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPD 507
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ T I++ L + E+A +++ +G+ +F
Sbjct: 508 AVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAF 544
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 181/381 (47%), Gaps = 35/381 (9%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++ + +Y+ +ID L K + AY + +M V + P T++ LI+G C +G +A
Sbjct: 189 VNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAF 248
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
RL +M P+ YT+ IL+D C ++ E V+ +M + V P T +L+ G
Sbjct: 249 RLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDG- 307
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
Y L N +A +L + P S
Sbjct: 308 --------------------------------YCLVNE--VGKAKHVLSIISRMRVAPNS 333
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+++ + ++E + RG+ P TY L++ L KAGR ++
Sbjct: 334 RSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDE 393
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + + +++ +YN +ID FCK +D+A + +++++ I PN+ T+N LI G CK +
Sbjct: 394 MHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQ 453
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ +++ LL G+ + +T+N MI+ LC+ F++A LS+M + G+ P+ +TY
Sbjct: 454 LKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYET 513
Query: 366 LIRSLCAIGDVARSLRLFQKM 386
+I++L + ++ +L ++M
Sbjct: 514 IIQALFHKDENEKAQKLLREM 534
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS + ++P++R YN +I+ K +D A F +M P + TYN LI G+C+ G
Sbjct: 324 ISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGR 383
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A LV +M ++ TY LID FC + V + +++ +KE + PN T
Sbjct: 384 IPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNI 443
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G+ + A ++ + + N ++ L + EA +L KM D G
Sbjct: 444 LIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNG 503
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
+P++ T++ + L + + +L + +GV
Sbjct: 504 IIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGV 539
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 119/277 (42%), Gaps = 35/277 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN ++D N + A +S + P+ +YNI+I+G C+I +VDEA
Sbjct: 293 GVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEA 352
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M G AP+ TY LIDG C A R+ + +++ M + + T SL+
Sbjct: 353 LCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLID- 411
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
VF C + H +A A+++K+ + G P
Sbjct: 412 VF-CKNQH---------------------------------VDKAIALVKKIKEHGIQPN 437
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L G L + + +G TY +++ L K G E + L+
Sbjct: 438 MCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLS 497
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+ + ++ + +Y +I + ++A ++ REM
Sbjct: 498 KMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREM 534
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 127/530 (23%), Positives = 227/530 (42%), Gaps = 41/530 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ S Y +VI A VK +++ A +M LI G C + +A
Sbjct: 305 GVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKA 364
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +ME G AP+ ++++I+ FC + + + + MK + P+ V ++ G
Sbjct: 365 LDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQG 424
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ P A E+ E + +CN + L A + LR M ++G P
Sbjct: 425 CLKAESPEAALEIFNDSFETW-IAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPN 483
Query: 185 SSTFDYTV--TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK---------- 232
++ + C + +DL + I +++G++P TY +L++ +K
Sbjct: 484 VVFYNNMMLAHCRMKNMDLARS--IFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEV 541
Query: 233 -------------------------AGRDVEGDRYLNHVFKDRLVS-NVNSYNMVIDCFC 266
G+ + L ++ K++ S SYN +ID F
Sbjct: 542 INQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFF 601
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K D A E REM + I+PN+VTF +LI+G CK + E++ + K D
Sbjct: 602 KEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVP 661
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
+ ++ID C+ + + A SE++E G+ PN YN LI +G + ++ L++KM
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKM 721
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
D IS D++T+ +I + + A + +L LG+ PD Y L+ L K G+F
Sbjct: 722 VNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQF 781
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
A + M++ P+ + ++ ++G EA + E+G+
Sbjct: 782 VRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGL 831
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/529 (20%), Positives = 215/529 (40%), Gaps = 38/529 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P N V+ +LV+SN ID A + +M + D T +L+ R +EA+
Sbjct: 200 VVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAM 259
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCP-NEATVRSLVHG 124
++ +++ G P+ +++ + C K + +L M+E+ P ++ T S++
Sbjct: 260 KIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVA 319
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A ++ + + +L+ N + +A +M + G P+
Sbjct: 320 CVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPD 379
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F + +++ + I G+ P +++ KA N
Sbjct: 380 KVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFN 439
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
F+ + N + CK +D AT R M ++ I PN+V +N ++ HC+
Sbjct: 440 DSFETWIAHGFMC-NKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMK 498
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ R + +LE G +P+ FT++ +ID + ++A + +++M+ N + YN
Sbjct: 499 NMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYN 558
Query: 365 ILIRSLCAIGDVARSLRLFQ------------------------------------KMQA 388
+I LC +G +++ + Q +M
Sbjct: 559 TIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSE 618
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ ISP++ TF +LI FC+ N+++ A + M + L+ D +Y ALI K
Sbjct: 619 NGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKT 678
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
A F + + G P+ N ++ G+ + A D+ K GIS
Sbjct: 679 AYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGIS 727
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 207/488 (42%), Gaps = 40/488 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI+PS+ L + +I +K+ S + A F S + F N + +C+ G VD
Sbjct: 409 VGIAPSSVLVHKMIQGCLKAESPEAALEIFND-SFETWIAHGFMCNKIFLLLCKQGKVDA 467
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ ME G PNV Y ++ C K + + M E+ + PN T L+
Sbjct: 468 ATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILID 527
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G F+ D A+E++ + + +++ NT++ L S+A +L+ + +
Sbjct: 528 GFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL-----IK 582
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
E Y++ C I+D F K G VE R +
Sbjct: 583 EKR---YSMGC-------TSYNSIIDGFFKEG----------------DTDSAVEAYREM 616
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ ++ + NV ++ +I+ FCK N MD A E+ EM+ +D+ ++ + LI G CK
Sbjct: 617 S---ENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKK 673
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ L LLE G P+ +N++I + + A+D +MV G+ + TY
Sbjct: 674 NDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTY 733
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+I L G++ + L+ ++ A I PD + L+ + + +A K M
Sbjct: 734 TTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKK 793
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
P+ YS +I + G +EA + M + G D NL++ GR E+
Sbjct: 794 KDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLV-----SGRVEK 848
Query: 484 AHDIVKTS 491
K S
Sbjct: 849 PPAAAKIS 856
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/394 (20%), Positives = 168/394 (42%), Gaps = 26/394 (6%)
Query: 109 RNVCPNEATVRSLVHGVFRCLDPH-KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
R++C L+H +F H +A LL+ F+ P TL+ N++
Sbjct: 107 RSLCEGGDVFWVLIHILFSSPHTHDRASNLLVMFVSSNP--------TLIPSAMVNNLVD 158
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
+ ++ R F+Y + + ++ + + R V P ++
Sbjct: 159 SSKRFDFELSSRA-------FNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVL 211
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR----ATEICREMRD 283
+L ++ E ++ ++ V N+ + ++ +R A +I R +
Sbjct: 212 SSLVRSNLIDEA----KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMS 267
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP-DKFTFNSMIDCLCRAHRFE 342
R P+ + F+ + CK ++ +LL + E G P + T+ S+I + E
Sbjct: 268 RGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNME 327
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+A+ EMV +G+P + I LI C ++ ++L F +M+ + ++PD F+ +I
Sbjct: 328 EAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMI 387
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+ FC+ ++EKA + + M ++G+ P + +I+ +K+ + A + F +
Sbjct: 388 EWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWI- 446
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ N I L +QG+ + A ++ + +GI
Sbjct: 447 AHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGI 480
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 215/449 (47%), Gaps = 13/449 (2%)
Query: 13 YNAVIDALVKSNSI-DLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
+N+++ AL + + +A + +PD TY IL++G+C+ G V +ALR++ M
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGM 198
Query: 72 --EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEI-MKERNVCP-NEATVRSLVHGVFR 127
+ L P+V T ++DG C + RV E +E M + CP N T L+ R
Sbjct: 199 SRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCR 258
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A+EL + ME E + Q +V NT++ L A R+ R PE
Sbjct: 259 VGNISMAYEL-VEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPEGK 315
Query: 187 TFDYTVTCLVTGLDLNETCGI-LDTF---IKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
T + LV L G+ ++ F + G P Y ++ L +AGR +
Sbjct: 316 GNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSM 375
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + + + +YN++I FC+ + A E+ +EM++ I P++ T+NTL+SG CK
Sbjct: 376 ASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCK 435
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ ELL +++ G +P TF +++ C+ + ++AL L M E G+ PN +
Sbjct: 436 AGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVI 495
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN LI LC GDV ++ LF +M+ + ++ TFNAL++ N EKA + M
Sbjct: 496 YNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMR 555
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
PD + L++ L G D K+
Sbjct: 556 EERCFPDYVTVDVLMEWLPVIGETDRLKR 584
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 220/501 (43%), Gaps = 56/501 (11%)
Query: 8 PSTRLYNAVIDALVK--SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
PS L +A++ L+ S+ A ++ PD F +N ++ + R+ V
Sbjct: 97 PSAPLLSAILSKLLARFSSPEPAARFLAASLAAGAPAPDVFAFNSILAALARVRDVPGMA 156
Query: 66 RLVKQMEGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN--VCPNEATVRSLV 122
R+ M+G P+V TY IL++G C A RV + RVL+ M ++ + P+ T+ ++V
Sbjct: 157 RIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVV 216
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY--------RLSNNSMASEAAAILR 174
G+ + + E L +R NT+ Y R+ N SMA E ++
Sbjct: 217 DGLCKS---GRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYE---LVE 270
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGL-DLNETCGILDTF-IKRGVKPRFSTYLLLMEALYK 232
KM + G +P++ T+ +V GL T L+ F KR V P
Sbjct: 271 KMENEG-VPQNIV---TLNTIVGGLCRAGRTGAALEFFREKRTVWP-------------- 312
Query: 233 AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
EG N +Y+ ++ N + A E+ E +P+ +
Sbjct: 313 -----EGK------------GNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIM 355
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+ T+ISG + + + + E GFK D +N +I CR R +A + L EM
Sbjct: 356 YFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMK 415
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
E G+ P+ TYN L+ C GD A L KM D P + TF L+ +C++ KI+
Sbjct: 416 EVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKID 475
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
+A + SM G+ P+N Y+ LI L K G D A + F M++ + T N +L
Sbjct: 476 EALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALL 535
Query: 473 ETLVQQGRFEEAHDIVKTSKE 493
+ L + E+A +++ +E
Sbjct: 536 KGLRDKNMPEKAFELMDQMRE 556
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 174/389 (44%), Gaps = 10/389 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSID--LAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
L I P N V+D L KS + LA+++ + SV C P+ TYN LI CR+G +
Sbjct: 203 LDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNI 262
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE-RNVCP----NEA 116
A LV++ME G N+ T ++ G C A R LE +E R V P N
Sbjct: 263 SMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAA---LEFFREKRTVWPEGKGNAV 319
Query: 117 TVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
T +LV + + A EL M ++ T++ L+ +A ++ M
Sbjct: 320 TYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSM 379
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
+ G+ ++ ++ + L+E +L + G++P TY L+ KAG
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDF 439
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
D L + D +V ++ ++ +CKV +D A I R M + I PN V +NTL
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
I CK +V EL + E + TFN+++ L + E A + + +M E
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERC 559
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQK 385
P+ +T ++L+ L IG+ R R Q+
Sbjct: 560 FPDYVTVDVLMEWLPVIGETDRLKRFMQQ 588
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 150/355 (42%), Gaps = 41/355 (11%)
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRG--VKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T+ V L + + +LD ++ ++P T +++ L K+GR E
Sbjct: 170 PDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL 229
Query: 241 RYLNHVFKD--RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
++ N +YN +ID FC+V + A E+ +M + + N+VT NT++
Sbjct: 230 AFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVG 289
Query: 299 GHCKDAE-------------------------------------VHKTRELLVMLLECGF 321
G C+ V EL + G
Sbjct: 290 GLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGH 349
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
PD + +MI L +A R EDA S M E G +T YNILI C + +
Sbjct: 350 SPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYE 409
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
L Q+M+ I PD+ T+N L+ C+ ++ M+ G +P ++ L+
Sbjct: 410 LLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYC 469
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
K G+ DEA + SM+++G +P++ N +++ L ++G + A ++ KE+ +
Sbjct: 470 KVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSV 524
>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 732
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 128/506 (25%), Positives = 224/506 (44%), Gaps = 17/506 (3%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP ++ A+++ LV+ D ++ +Q M PD Y++L + G + +
Sbjct: 195 SPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEK 254
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L+ +M LG PNVY YTI I C ++ E ++ E+MK V PN T +++ G
Sbjct: 255 LLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYC 314
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + +A+ L + E L +V TL+ A ++ M G P
Sbjct: 315 KTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNL- 373
Query: 187 TFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
Y CL+ G ++ E G+L + P TY +L+ L R E +R
Sbjct: 374 ---YVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRL 430
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ +R+ + +YN +I FCK +++A ++C EM + PN++TF+TLI G+CK
Sbjct: 431 FQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCK 490
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ L + G PD T+ ++ID + ++AL S+M+E G+ PN T
Sbjct: 491 VRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHT 550
Query: 363 YNILIRSLCAIGDVARSLRLF--------QKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
+ L+ G ++ ++ + K R F LI+ C+ I +A
Sbjct: 551 FACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRA 610
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
+ F M + G+ PD +SY +++KA ++ R + M + G P+ N +L
Sbjct: 611 SRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPN-LMVNQLLAM 669
Query: 475 LVQQGRFEEAHDIVKTSKERGISFKS 500
Q+ + + + S G FK+
Sbjct: 670 FYQENGYLRSACFLTNSSRLGTIFKN 695
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 194/459 (42%), Gaps = 13/459 (2%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
+++LI +G+ ++AL + ++M +P+ +++G +R V+ ++M
Sbjct: 169 FSLLIMEFLEMGLFEDALWVSREMRC---SPDSKACLAILNGLVRRRRFDSVWVDYQLMI 225
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
R + P+ L F+ P K +LL + + L +
Sbjct: 226 SRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKME 285
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
EA + M G +P T+ + +L + G+ + + P + L+
Sbjct: 286 EAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLV 345
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
+ KA V H+ K + N+ YN +I CK M A + EM +++
Sbjct: 346 DGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLS 405
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
P++ T+ LI+G C + + + L + P T+NS+I C+ + E ALD
Sbjct: 406 PDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDL 465
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
SEM GV PN IT++ LI C + ++ ++ L+ +M I PD+ T+ LI + +
Sbjct: 466 CSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFK 525
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL---------SMEQ 458
+++A + + ML G+ P++ +++ L+ K GR +A +L S+ Q
Sbjct: 526 EANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQ 585
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
C + LI E L Q G A K G++
Sbjct: 586 RSCWKYVGFTCLI-EGLCQNGYILRASRFFSDMKSGGVT 623
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 122/280 (43%), Gaps = 16/280 (5%)
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
R+S + L+ A D++ ++ ++ ++++I F ++ + + A +
Sbjct: 141 RYSEPTNISHRLFNALEDIQSPKF-----------SIGVFSLLIMEFLEMGLFEDALWVS 189
Query: 279 REMR-DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
REMR D L N L+ D+ V +L++ G PD ++ + C +
Sbjct: 190 REMRCSPDSKACLAILNGLVRRRRFDS-VWVDYQLMI---SRGLVPDVHIYSVLFQCCFK 245
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
L EM GV PN Y I IR LC + + ++F+ M+ + P++YT
Sbjct: 246 QGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYT 305
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
++A+I +C+ + +A + +L L P+ + L+ K+ A+ F+ M
Sbjct: 306 YSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMV 365
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ G +P+ Y N ++ + G EA ++ + +S
Sbjct: 366 KFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLS 405
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 122/471 (25%), Positives = 211/471 (44%), Gaps = 7/471 (1%)
Query: 29 AYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILID 88
A L F++M + TY+ILI CR G +D A+ + +M VY Y LI+
Sbjct: 211 AELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLIN 270
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
G+C + + M ++ + P T SL+ G + HKAF++ +
Sbjct: 271 GYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISP 330
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
++ L +M +EA + +M +R +P T++ + +++E +L
Sbjct: 331 NTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLL 390
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
D + +G P TY L+ L GR E +++ + KD N Y+ ++ +CK
Sbjct: 391 DEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKE 450
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC---GFKPDK 325
A CR M +R +A +LV + LI G ++ H TR L +L E G +PD
Sbjct: 451 GRFKDAVSACRVMVERGVAMDLVCYAILIDGTARE---HDTRALFGLLKEMHNHGLRPDA 507
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
+ +MID +A ++A MV+ G PN +TY LI LC G + ++ L ++
Sbjct: 508 VIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKE 567
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
++P+ T+ + R +EKA + +ML G SY+ LI+ + G+
Sbjct: 568 TLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCRLGK 626
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+EA + M N PD T + I+ ++ +EA + T ++G+
Sbjct: 627 IEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGL 677
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 189/437 (43%), Gaps = 1/437 (0%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN++I+ K + A F +M P TY LI G C G +A ++ +M
Sbjct: 265 YNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMT 324
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G +PN YT+T +I G C A +AE R+ MKER + P+E T ++ G R +
Sbjct: 325 AKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNIS 384
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+AF LL + + + L+ L + SEA + + + + + V
Sbjct: 385 EAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALV 444
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+ ++RGV Y +L++ + L + L
Sbjct: 445 HGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLR 504
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+ Y +ID K + A + M D PN+VT+ LI+G CK + K L
Sbjct: 505 PDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELL 564
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L P+ T+ +D L R E A+ M++ G T++YNILIR C
Sbjct: 565 SKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCR 623
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
+G + + +L M + I PD T++ +I C+ + +++A K + +ML GL+PD +
Sbjct: 624 LGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLA 683
Query: 433 YSALIKALIKSGRFDEA 449
YS L+ +G ++A
Sbjct: 684 YSFLVHGCCIAGELEKA 700
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 178/396 (44%), Gaps = 42/396 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP+T + A+I L ++N + A F +M + P TYN++I G CR G + EA
Sbjct: 327 GISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEA 386
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M G G+ P+ YTY LI G C+ RV+E ++ + + + N +LVHG
Sbjct: 387 FHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHG 446
Query: 125 V---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA-AILRKMGDRG 180
R D A R M + LVC +L + + A +L++M + G
Sbjct: 447 YCKEGRFKDAVSA----CRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHG 502
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG------ 234
P++ + + +L E G+ D + G P TY L+ L KAG
Sbjct: 503 LRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAE 562
Query: 235 ----RDVEGDRYLNHV----FKDRLVSNVN--------------------SYNMVIDCFC 266
+ D NH+ F D L N SYN++I FC
Sbjct: 563 LLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFC 622
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
++ ++ AT++ M D DI P+ +T++T+I CK + + + +L +L+ G KPD
Sbjct: 623 RLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTL 682
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ ++ C A E A + EM+ G+ N +T
Sbjct: 683 AYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 207/483 (42%), Gaps = 17/483 (3%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P +Y+AV+ +L + + A M +QCK YN+LIHG+C+ + EAL
Sbjct: 127 VQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEAL 186
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ + G NV TY + E + + M E+ +C N T L+
Sbjct: 187 EIKNCLMQKGLEANVVTYY---------GKFNEAELLFKEMGEKGLCANHITYSILIDSF 237
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
R + A L + + N+L+ AS A +M D+G P
Sbjct: 238 CRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTV 297
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ ++ + ++ + + +G+ P T+ ++ L +A E R
Sbjct: 298 VTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGE 357
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + +++ + +YN++I+ C+ + A + EM + P+ T+ LISG C
Sbjct: 358 MKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGR 417
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V + +E + L + K + +++++ C+ RF+DA+ MVE GV + + Y I
Sbjct: 418 VSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAI 477
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI D L ++M + PD + +I + +++A + M+ G
Sbjct: 478 LIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEG 537
Query: 426 LRPDNFSYSALIKALIKSGRFDEA----KQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
P+ +Y+ALI L K+G D+A K+T +S P+ T L+ L + G
Sbjct: 538 CLPNVVTYTALINGLCKAGLMDKAELLSKETLVS----DVTPNHITYGCFLDHLTRGGNM 593
Query: 482 EEA 484
E+A
Sbjct: 594 EKA 596
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 210/496 (42%), Gaps = 33/496 (6%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P R +A+++ L++ + L F + +PD + Y+ ++ +C + ++A +
Sbjct: 94 PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEM 153
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ME ++ Y +LI G C ++R+ E + + ++ + N T +G F
Sbjct: 154 IHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVT----YYGKF- 208
Query: 128 CLDPHKAFELLIRFMEREPL-TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
ELL + M + L + + L+ A L KM +
Sbjct: 209 -----NEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKM-------TKA 256
Query: 187 TFDYTV---TCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
+ ++TV L+ G + + D I +G+ P TY L+ G +
Sbjct: 257 SIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKA 316
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ N + + N ++ +I C+ NMM A + EM++R I P+ VT+N +I G
Sbjct: 317 FKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEG 376
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
HC+ + + LL ++ GF PD +T+ +I LC R +A + + ++ + N
Sbjct: 377 HCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLN 436
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+ Y+ L+ C G ++ + M ++ D+ + LI R E +A F
Sbjct: 437 NMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAR----EHDTRALF 492
Query: 420 SML----TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+L GLRPD Y+ +I K+G EA + M GC P+ T ++ L
Sbjct: 493 GLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGL 552
Query: 476 VQQGRFEEAHDIVKTS 491
+ G ++A + K +
Sbjct: 553 CKAGLMDKAELLSKET 568
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 181/421 (42%), Gaps = 46/421 (10%)
Query: 78 PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFEL 137
P V T + L++G +R +V + + + NV P+ ++V + D +KA E+
Sbjct: 94 PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEM 153
Query: 138 LIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLV 196
I +ME +V N L++ L + EA I CL
Sbjct: 154 -IHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEI-------------------KNCL- 192
Query: 197 TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVN 256
+++G++ TY G+ E + + + L +N
Sbjct: 193 ---------------MQKGLEANVVTYY---------GKFNEAELLFKEMGEKGLCANHI 228
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+Y+++ID FC+ MD A +M I + +N+LI+G+CK + +
Sbjct: 229 TYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEM 288
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
++ G P T+ S+I C + A +EM G+ PNT T+ +I LC +
Sbjct: 289 IDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMM 348
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
A ++RLF +M+ +I P T+N +I+ CR I +A M+ G PD ++Y L
Sbjct: 349 AEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPL 408
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
I L GR EAK+ + ++ ++ + ++ ++GRF++A + ERG+
Sbjct: 409 ISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGV 468
Query: 497 S 497
+
Sbjct: 469 A 469
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 137/313 (43%), Gaps = 34/313 (10%)
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD------------------RYLNHV---F 247
D FI R +KP +L+M +L + + + R N V F
Sbjct: 60 DPFISRNLKPSHVDKVLMMLSLNDSRLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLF 119
Query: 248 KDRLVSNVNS----YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
D + +NV Y+ V+ C++ ++A E+ M ++V +N LI G CK
Sbjct: 120 DDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKS 179
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + E+ L++ G + + T+ +F +A EM E G+ N ITY
Sbjct: 180 RRIWEALEIKNCLMQKGLEANVVTYYG---------KFNEAELLFKEMGEKGLCANHITY 230
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+ILI S C G++ ++ KM I +Y +N+LI +C++ A+ F M+
Sbjct: 231 SILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMID 290
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL P +Y++LI G + +A + + M G +P++YT I+ L + E
Sbjct: 291 KGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAE 350
Query: 484 AHDIVKTSKERGI 496
A + KER I
Sbjct: 351 AIRLFGEMKERKI 363
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 107/233 (45%), Gaps = 18/233 (7%)
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM-----LLECGFKPDKFTFN 329
T I R + IA N + IS + K + V K +L + + +C P+ T +
Sbjct: 45 TSILRGKQSWRIAFN----DPFISRNLKPSHVDKVLMMLSLNDSRLMKDCNLMPEVRTLS 100
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++++ L R RF D L ++V V P+ Y+ ++RSLC + D ++ + M+ +
Sbjct: 101 ALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFN 160
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ I +N LI C+ +I +A + ++ GL + +Y G+F+EA
Sbjct: 161 QCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY---------YGKFNEA 211
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFP 502
+ F M + G + T ++++++ ++G + A + + I F +P
Sbjct: 212 ELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYP 264
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +T YN +I + I+ A M+ + PD TY+ +I+ C+ + EA
Sbjct: 606 GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEA 665
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
++L M G P+ Y+ L+ G C A + + F + + M R + N T +S
Sbjct: 666 IKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVTPKS 721
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 219/469 (46%), Gaps = 43/469 (9%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
+PD F YN LI+G C++ +D+A R++ +M ++P+ TY I+I C+ ++ +
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
VL + N P T L+ +A +L+ + R NT++ +
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
M A ++R L+L +G +P
Sbjct: 275 KEGMVDRAFEMVRN-----------------------LEL------------KGSEPDVI 299
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+Y +L+ AL G+ EG++ + +F ++ NV +Y+++I C+ ++ A + + M
Sbjct: 300 SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 359
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+++ + P+ +++ LI+ C++ + E L ++ G PD +N+++ LC+ +
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+ AL+ ++ E G PN+ +YN + +L + GD R+L + +M ++ I PD T+N++
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I CR +++A + M + P +Y+ ++ K+ R ++A SM NGC
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC 539
Query: 462 NPDSYTSNLILETLVQQG----RFEEAHDIVKTSKERGISFK----SFP 502
P+ T +++E + G E A+D+V+ SFK +FP
Sbjct: 540 RPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTFP 588
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 192/413 (46%), Gaps = 3/413 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP T YN +I +L +DLA Q+ D C+P TY ILI G VDEAL+
Sbjct: 190 SPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALK 249
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L+ +M G P+++TY +I G C V F ++ ++ + P+ + L+ +
Sbjct: 250 LMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALL 309
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ +L+ + + + + L+ L + EA +L+ M ++G P++
Sbjct: 310 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 369
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
++D + L+ L+T I G P Y ++ L K G+ + +
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ N +SYN + RA + EM I P+ +T+N++IS C++ V
Sbjct: 430 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMV 489
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ ELLV + C F P T+N ++ C+AHR EDA++ L MV G PN TY +L
Sbjct: 490 DEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVL 549
Query: 367 IRSLCAIGDVARSLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
I + G A ++ L + + D IS Y+F L ++F +N ++++ + F
Sbjct: 550 IEGIGFAGYRAEAMELANDLVRIDAISE--YSFKRLHRTFPLLNVLQRSSQTF 600
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 189/398 (47%), Gaps = 2/398 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YNA+I+ K N ID A +M PD TYNI+I +C G +D AL++
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ Q+ P V TYTILI+ V E ++++ M R + P+ T +++ G+ +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+AFE ++R +E + ++ N LL L N E ++ KM P
Sbjct: 276 EGMVDRAFE-MVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ +T L + E +L ++G+ P +Y L+ A + GR +L +
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
D + ++ +YN V+ CK D+A EI ++ + +PN ++NT+ S +
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ +++ ++ G PD+ T+NSMI CLCR ++A + L +M P+ +TYNI+
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
+ C + ++ + + M + P+ T+ LI+
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 206/438 (47%), Gaps = 36/438 (8%)
Query: 51 LIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
+ H CR G E+L L++ M GY P+V T LI GF + + + RV+EI+ E+
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEIL-EKF 153
Query: 111 VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA 170
P+ +L++G + M R +A
Sbjct: 154 GQPDVFAYNALINGFCK--------------MNR---------------------IDDAT 178
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
+L +M + + P++ T++ + L + L+ +L+ + +P TY +L+EA
Sbjct: 179 RVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEAT 238
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
G E + ++ + L ++ +YN +I CK M+DRA E+ R + + P++
Sbjct: 239 MLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDV 298
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
+++N L+ + + +L+ + P+ T++ +I LCR + E+A++ L
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M E G+ P+ +Y+ LI + C G + ++ + M +D PDI +N ++ + C+ K
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
++A + F + +G P++ SY+ + AL SG A L M NG +PD T N
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 471 ILETLVQQGRFEEAHDIV 488
++ L ++G +EA +++
Sbjct: 479 MISCLCREGMVDEAFELL 496
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 63/122 (51%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G SP++ YN + AL S A +M + PD TYN +I +CR G+VDE
Sbjct: 432 VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDE 491
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+ M + P+V TY I++ GFC A R+ + VLE M PNE T L+
Sbjct: 492 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551
Query: 124 GV 125
G+
Sbjct: 552 GI 553
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 115/273 (42%), Gaps = 38/273 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P Y+ +I A + +D+A + M D C PD YN ++ +C+ G D+A
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDG-FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L + ++ +G +PN +Y + + + ++ + +LE+M + P+E T S++
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN-GIDPDEITYNSMIS 481
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ R +AFELL+ E + P
Sbjct: 482 CLCREGMVDEAFELLVDMRSCE-----------------------------------FHP 506
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + + + +L++ + G +P +TY +L+E + AG E
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELA 566
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
N + + +S S+ + F +N++ R+++
Sbjct: 567 NDLVRIDAISEY-SFKRLHRTFPLLNVLQRSSQ 598
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 219/469 (46%), Gaps = 43/469 (9%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
+PD F YN LI+G C++ +D+A R++ +M ++P+ TY I+I C+ ++ +
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
VL + N P T L+ +A +L+ + R NT++ +
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
M A ++R L+L +G +P
Sbjct: 275 KEGMVDRAFEMVRN-----------------------LEL------------KGCEPDVI 299
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+Y +L+ AL G+ EG++ + +F ++ NV +Y+++I C+ ++ A + + M
Sbjct: 300 SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 359
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+++ + P+ +++ LI+ C++ + E L ++ G PD +N+++ LC+ +
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+ AL+ ++ E G PN+ +YN + +L + GD R+L + +M ++ I PD T+N++
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I CR +++A + M + P +Y+ ++ K+ R ++A SM NGC
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC 539
Query: 462 NPDSYTSNLILETLVQQG----RFEEAHDIVKTSKERGISFK----SFP 502
P+ T +++E + G E A+D+V+ SFK +FP
Sbjct: 540 RPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTFP 588
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 192/413 (46%), Gaps = 3/413 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP T YN +I +L +DLA Q+ D C+P TY ILI G VDEAL+
Sbjct: 190 SPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALK 249
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L+ +M G P+++TY +I G C V F ++ ++ + P+ + L+ +
Sbjct: 250 LMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALL 309
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ +L+ + + + + L+ L + EA +L+ M ++G P++
Sbjct: 310 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 369
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
++D + L+ L+T I G P Y ++ L K G+ + +
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ N +SYN + RA + EM I P+ +T+N++IS C++ V
Sbjct: 430 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMV 489
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ ELLV + C F P T+N ++ C+AHR EDA++ L MV G PN TY +L
Sbjct: 490 DEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVL 549
Query: 367 IRSLCAIGDVARSLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
I + G A ++ L + + D IS Y+F L ++F +N ++++ + F
Sbjct: 550 IEGIGFAGYRAEAMELANDLVRIDAISE--YSFKRLHRTFPLLNVLQRSSQTF 600
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 189/398 (47%), Gaps = 2/398 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YNA+I+ K N ID A +M PD TYNI+I +C G +D AL++
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ Q+ P V TYTILI+ V E ++++ M R + P+ T +++ G+ +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+AFE ++R +E + ++ N LL L N E ++ KM P
Sbjct: 276 EGMVDRAFE-MVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ +T L + E +L ++G+ P +Y L+ A + GR +L +
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
D + ++ +YN V+ CK D+A EI ++ + +PN ++NT+ S +
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ +++ ++ G PD+ T+NSMI CLCR ++A + L +M P+ +TYNI+
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
+ C + ++ + + M + P+ T+ LI+
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 206/438 (47%), Gaps = 36/438 (8%)
Query: 51 LIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
+ H CR G E+L L++ M GY P+V T LI GF + + + RV+EI+ E+
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEIL-EKF 153
Query: 111 VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA 170
P+ +L++G + M R +A
Sbjct: 154 GQPDVFAYNALINGFCK--------------MNR---------------------IDDAT 178
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
+L +M + + P++ T++ + L + L+ +L+ + +P TY +L+EA
Sbjct: 179 RVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEAT 238
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
G E + ++ + L ++ +YN +I CK M+DRA E+ R + + P++
Sbjct: 239 MLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDV 298
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
+++N L+ + + +L+ + P+ T++ +I LCR + E+A++ L
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M E G+ P+ +Y+ LI + C G + ++ + M +D PDI +N ++ + C+ K
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
++A + F + +G P++ SY+ + AL SG A L M NG +PD T N
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 471 ILETLVQQGRFEEAHDIV 488
++ L ++G +EA +++
Sbjct: 479 MISCLCREGMVDEAFELL 496
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 63/122 (51%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G SP++ YN + AL S A +M + PD TYN +I +CR G+VDE
Sbjct: 432 VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDE 491
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+ M + P+V TY I++ GFC A R+ + VLE M PNE T L+
Sbjct: 492 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551
Query: 124 GV 125
G+
Sbjct: 552 GI 553
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P YN++I L + +D A+ M + P TYNI++ G C+ +++A
Sbjct: 468 GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDA 527
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
+ +++ M G G PN TYT+LI+G A AE +
Sbjct: 528 INVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 218/486 (44%), Gaps = 45/486 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P YNA++D KS A ++M V+ C P TYN LI R G++ E
Sbjct: 133 MGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKE 192
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV- 122
A+ L QM G +V+TYT L+ GF A + RV M+ PN T +L+
Sbjct: 193 AMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIK 252
Query: 123 -HGVFRCLDPHKAFELLIRFMEREP---LTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
HG + K E++ F E + + + NTLL N M SE + + ++M
Sbjct: 253 MHG-----NRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 307
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G++PE T++ ++ ++ I ++ G+ P STY ++ AL + G +
Sbjct: 308 AGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQ 367
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR----ATEICR--------------- 279
++ + R N +Y ++ + + R A EIC
Sbjct: 368 SEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVL 427
Query: 280 ----------------EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
E++ + +P+L T N ++S + + KT E+L + E GF P
Sbjct: 428 VNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTP 487
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
T+NS++ R+ FE + + L E++ G+ P+TI+YN +I + C G + + R+F
Sbjct: 488 SLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIF 547
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+M+ + PD+ T+N + S+ + E A M+ G +P+ +Y++++ K
Sbjct: 548 SEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKH 607
Query: 444 GRFDEA 449
D+A
Sbjct: 608 NHRDDA 613
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/555 (22%), Positives = 229/555 (41%), Gaps = 73/555 (13%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR-LVKQM 71
Y ++I A V + A + F++M + CKP TYN++++ ++G+ ++ L + M
Sbjct: 36 YTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGM 95
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
+ G P+ YTY LI E V + MK P++ T +L+ +
Sbjct: 96 KNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRT 155
Query: 132 HKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A E+L R ME + +V N+L+ + + + EA + +M + G + T+
Sbjct: 156 KEAMEVL-REMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTT 214
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
++ V + G KP T+ L++ G+ E + +
Sbjct: 215 LLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSC 274
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
V ++ ++N ++ F + M + + +EM+ P T+NTLIS + + +
Sbjct: 275 CVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAM 334
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
++ +LE G PD T+N+++ L R +E + +EM + PN +TY L+ +
Sbjct: 335 DIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAY 394
Query: 371 CAIGDVARSLRL-----------------------------------FQKMQADRISPDI 395
++ R L L F +++ SPD+
Sbjct: 395 ANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDL 454
Query: 396 YTFNALI------QSFCRMNKI-----------------------------EKAEKAFFS 420
T NA++ Q F + N+I E++E+
Sbjct: 455 STLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKE 514
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+L G++PD SY+ +I A ++GR EA + F M ++G PD T N + +
Sbjct: 515 ILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSM 574
Query: 481 FEEAHDIVKTSKERG 495
FE+A D+V+ + G
Sbjct: 575 FEDAIDVVRYMIKHG 589
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/487 (21%), Positives = 212/487 (43%), Gaps = 9/487 (1%)
Query: 16 VIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLG 75
+I L K + +A + D D + Y LI G EA+ + K+ME G
Sbjct: 4 IISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63
Query: 76 YAPNVYTYTILIDGFCN-AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
P + TY ++++ + ++ + E MK V P+E T +L+ R +A
Sbjct: 64 CKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEA 123
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
+ + K+ N LL + EA +LR+M G P T++ ++
Sbjct: 124 AAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISA 183
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
L E + + ++ G+ TY L+ +AG+D R + N
Sbjct: 184 YARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPN 243
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
+ ++N +I ++ E+++ P++VT+NTL++ ++ + +
Sbjct: 244 ICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFK 303
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
+ GF P++ T+N++I R F+ A+D M+E G+ P+ TYN ++ +L G
Sbjct: 304 EMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGG 363
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
+S ++F +M+ R P+ T+ +L+ ++ +I + + + + P ++
Sbjct: 364 LWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEP----HA 419
Query: 435 ALIKALI----KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
L+K L+ K EA+ FL +++ G +PD T N +L ++ F + ++I+
Sbjct: 420 VLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNF 479
Query: 491 SKERGIS 497
E G +
Sbjct: 480 MNESGFT 486
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 127/260 (48%), Gaps = 1/260 (0%)
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
+++ L K G+ LN + KD +V +Y +I A + ++M +
Sbjct: 3 VIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 285 DIAPNLVTFNTLISGHCK-DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
P L+T+N +++ + K +K + L + G PD++T+N++I C R E+
Sbjct: 63 GCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEE 122
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A +M G P+ +TYN L+ ++ + ++M+ + SP I T+N+LI
Sbjct: 123 AAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLIS 182
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
++ R +++A + M+ G+ D F+Y+ L+ +++G+ + A + F M GC P
Sbjct: 183 AYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKP 242
Query: 464 DSYTSNLILETLVQQGRFEE 483
+ T N +++ +G+F E
Sbjct: 243 NICTFNALIKMHGNRGKFAE 262
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 1/207 (0%)
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
+IS K+ +V LL L + GF D + + S+I R+ +A+ +M E G
Sbjct: 4 IISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63
Query: 356 VPPNTITYNILIRSLCAIGDVARSLR-LFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
P ITYN+++ +G ++ LF+ M+ + PD YT+N LI R + E+A
Sbjct: 64 CKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEA 123
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
F M ++G PD +Y+AL+ KS R EA + ME NGC+P T N ++
Sbjct: 124 AAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISA 183
Query: 475 LVQQGRFEEAHDIVKTSKERGISFKSF 501
+ G +EA ++ E GI+ F
Sbjct: 184 YARDGLLKEAMELKNQMVEGGINLDVF 210
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 128/317 (40%), Gaps = 37/317 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN +I A + S D A +++M PD TYN ++ + R G+ +++
Sbjct: 309 GFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQS 368
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +M+ PN TY L+ + N K + + + E + + P+ +++LV
Sbjct: 369 EKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLV 428
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKL-VCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+C D E+ ++R+ + L N +L M ++ IL M + G+ P
Sbjct: 429 NSKC-DLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTP 487
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+T++ + + + +L + +G+KP +Y ++ A + GR E R
Sbjct: 488 SLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIF 547
Query: 244 NHVFKDRLVSNV-----------------------------------NSYNMVIDCFCKV 268
+ + + LV +V N+YN V+D +CK
Sbjct: 548 SEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKH 607
Query: 269 NMMDRATEICREMRDRD 285
N D A + + D
Sbjct: 608 NHRDDAIMFISSLHELD 624
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 215/449 (47%), Gaps = 13/449 (2%)
Query: 13 YNAVIDALVKSNSI-DLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
+N+++ AL + + +A + +PD TY IL++G+C+ G V +ALR++ M
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGM 198
Query: 72 --EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEI-MKERNVCP-NEATVRSLVHGVFR 127
+ L P+V T ++DG C + RV E +E M + CP N T L+ R
Sbjct: 199 SRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCR 258
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A+EL + ME E + Q +V NT++ L A R+ R PE
Sbjct: 259 VGNISMAYEL-VEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPEGK 315
Query: 187 TFDYTVTCLVTGLDLNETCGI-LDTF---IKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
T + LV L G+ ++ F + G P Y ++ L +AGR +
Sbjct: 316 GNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSM 375
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + + + +YN++I FC+ + A E+ +EM++ I P++ T+NTL+SG CK
Sbjct: 376 ASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCK 435
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ ELL +++ G +P TF +++ C+ + ++AL L M E G+ PN +
Sbjct: 436 AGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVI 495
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN LI LC GDV ++ LF +M+ + ++ TFNAL++ N EKA + M
Sbjct: 496 YNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMR 555
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
PD + L++ L G D K+
Sbjct: 556 EERCFPDYVTVDVLMEWLPVIGETDRLKR 584
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 220/501 (43%), Gaps = 56/501 (11%)
Query: 8 PSTRLYNAVIDALVK--SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
PS L +A++ L+ S+ A ++ PD F +N ++ + R+ V
Sbjct: 97 PSAPLLSAILSKLLARFSSPEPAARFLAASLAAGAPAPDVFAFNSILAALARVRDVPGMA 156
Query: 66 RLVKQMEGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN--VCPNEATVRSLV 122
R+ M+G P+V TY IL++G C A RV + RVL+ M ++ + P+ T+ ++V
Sbjct: 157 RIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVV 216
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY--------RLSNNSMASEAAAILR 174
G+ + + E L +R NT+ Y R+ N SMA E ++
Sbjct: 217 DGLCKS---GRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYE---LVE 270
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGL-DLNETCGILDTF-IKRGVKPRFSTYLLLMEALYK 232
KM + G +P++ T+ +V GL T L+ F KR V P
Sbjct: 271 KMENEG-VPQNIV---TLNTIVGGLCRAGRTGAALEFFREKRTVWP-------------- 312
Query: 233 AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
EG N +Y+ ++ N + A E+ E +P+ +
Sbjct: 313 -----EGK------------GNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIM 355
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+ T+ISG + + + + E GFK D +N +I CR R +A + L EM
Sbjct: 356 YFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMK 415
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
E G+ P+ TYN L+ C GD A L KM D P + TF L+ +C++ KI+
Sbjct: 416 EVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKID 475
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
+A + SM G+ P+N Y+ LI L K G D A + F M++ + T N +L
Sbjct: 476 EALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALL 535
Query: 473 ETLVQQGRFEEAHDIVKTSKE 493
+ L + E+A +++ +E
Sbjct: 536 KGLRDKNMPEKAFELMDQMRE 556
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 184/417 (44%), Gaps = 18/417 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSID--LAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
L I P N V+D L KS + LA+++ + SV C P+ TYN LI CR+G +
Sbjct: 203 LDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNI 262
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE-RNVCP----NEA 116
A LV++ME G N+ T ++ G C A R LE +E R V P N
Sbjct: 263 SMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAA---LEFFREKRTVWPEGKGNAV 319
Query: 117 TVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
T +LV + + A EL M ++ T++ L+ +A ++ M
Sbjct: 320 TYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSM 379
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
+ G+ ++ ++ + L+E +L + G++P TY L+ KAG
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDF 439
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
D L + D +V ++ ++ +CKV +D A I R M + I PN V +NTL
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
I CK +V EL + E + TFN+++ L + E A + + +M E
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERC 559
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQ--------ADRISPDIYTFNALIQSF 405
P+ +T ++L+ L IG+ R R Q+ + +DR S + L ++F
Sbjct: 560 FPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHTASKRIVSDRTSAYFHFATGLAETF 616
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 153/359 (42%), Gaps = 49/359 (13%)
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRG--VKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T+ V L + + +LD ++ ++P T +++ L K+GR E
Sbjct: 170 PDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL 229
Query: 241 RYLNHVFKDRLVS------NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
++ R+ S N +YN +ID FC+V + A E+ +M + + N+VT N
Sbjct: 230 AFVEQ----RMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLN 285
Query: 295 TLISGHCKDAE-------------------------------------VHKTRELLVMLL 317
T++ G C+ V EL +
Sbjct: 286 TIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKM 345
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
G PD + +MI L +A R EDA S M E G +T YNILI C +
Sbjct: 346 SEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLH 405
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+ L Q+M+ I PD+ T+N L+ C+ ++ M+ G +P ++ L+
Sbjct: 406 EAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLV 465
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
K G+ DEA + SM+++G +P++ N +++ L ++G + A ++ KE+ +
Sbjct: 466 HGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSV 524
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 209/470 (44%), Gaps = 14/470 (2%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y A++ L+ + + A F M D C PD Y ++HG+C G +EA L+++
Sbjct: 145 YTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAM 204
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G+ PN+ Y LIDG+CNA + +V E M PN T L+HG+ +
Sbjct: 205 SNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVE 264
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A L R +E + L+ N A +L M G +P TF +
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L + E L + +K+GVK Y L++ L K G+ D + + + V
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+ +SY+ +ID C+ + +AT + +M ++ I + VT+ +I ++ +++
Sbjct: 385 PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKI 444
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
++ G PD T+ + C R EDA + +MV+ GV PN +TYN LIR
Sbjct: 445 FDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYAN 504
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF--FSMLTLGLRPDN 430
+G V+++ F+ M P+ ++ L++ + + + + + M L + ++
Sbjct: 505 LGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLED 564
Query: 431 FS----------YSALIKALIKSGRFDEAKQTFLSMEQNGCNP--DSYTS 468
+ YS I+ L + R +EAK F+ M+ P D YTS
Sbjct: 565 ITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTS 614
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/481 (25%), Positives = 209/481 (43%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
R Y +I+A + I A + PD + Y + G CR G++ A R+
Sbjct: 73 RTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVL 132
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M G +TYT L+ G A V E V M+ + P+ ++VHG+
Sbjct: 133 MPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGR 192
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A LL M +V N L+ N A + M P T+
Sbjct: 193 TEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTE 252
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L + + ++ G++P TY L++ G R L+ + +
Sbjct: 253 LIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNG 312
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
LV N +++++ID CK ++ A + + + N V + +LI G CK ++
Sbjct: 313 LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAAD 372
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
EL+ ++ GF PD +++S+ID LCR + A L +M+E G+ + +TY I+I L
Sbjct: 373 ELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDEL 432
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
++F KM A I+PDI T+ ++S+C ++E AE M+ G+ P+
Sbjct: 433 VREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNL 492
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+Y+ LI+ G +A TF M G P+ + ++L +V++ + + DI K
Sbjct: 493 VTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKI 552
Query: 491 S 491
+
Sbjct: 553 A 553
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 194/458 (42%), Gaps = 39/458 (8%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
TY LI+ C G + A + + + G AP+ Y YT + G+C A + RV +M
Sbjct: 74 TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
R T +L+HG+ M
Sbjct: 134 PLRGCLRTAFTYTALLHGLL-----------------------------------GAGMV 158
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
EA + M P++ + V L E +L+ + G +P Y L
Sbjct: 159 REAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNAL 218
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ AG + + +R NV +Y +I CK ++RA + M + +
Sbjct: 219 IDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGL 278
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN+VT+ LI G C + + LL ++ G P+ +TF+ +ID LC+ + E+A
Sbjct: 279 EPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQL 338
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L +V+ GV N + Y LI LC G + + L QKM ++ PD +++++LI C
Sbjct: 339 FLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC 398
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R K+ +A M+ G++ +Y+ +I L++ + K+ F M G NPD
Sbjct: 399 RQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIV 458
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFPGL 504
T + + + ++GR E+A ++ +RG+ FP L
Sbjct: 459 TYTVFVRSYCEEGRMEDAESMIVQMVDRGV----FPNL 492
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 201/411 (48%), Gaps = 22/411 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ +YNA+ID + ++ A F+ M ++C P+ TY LIHG+C+ G V+ A
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +M G PNV TYT LI G CN + FR+L +M+ + PN+ T L+
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A L +++ ++V +L+ L A +++KM G++P+
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ + L L++ +L+ +++G++ TY ++++ L R+V G
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV---REV-GSEGPK 442
Query: 245 HVFKDRLVSNVN----SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+F + + +N +Y + + +C+ M+ A + +M DR + PNLVT+NTLI G+
Sbjct: 443 KIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGY 502
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC------------L 348
V + +++ G+KP++ ++ ++ + + ++++D L
Sbjct: 503 ANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLL 562
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP--DIYT 397
++ E +P Y+ IR LC + + + F MQ ++P D+YT
Sbjct: 563 EDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYT 613
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 142/309 (45%), Gaps = 20/309 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ ++ +IDAL K ++ A L + K + Y LI G+C+ G +D A
Sbjct: 312 GLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAA 371
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+++M G+ P+ ++Y+ LIDG C K++++ +LE M E+ + + T ++
Sbjct: 372 DELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDE 431
Query: 125 VFRCLD---PHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRG 180
+ R + P K F+ +I + +V T+ R +A +++ +M DRG
Sbjct: 432 LVREVGSEGPKKIFDKMIA----TGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRG 487
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME-ALYKAGRDVEG 239
P T++ + +++ + + +G KP +Y +L+ + K+ D
Sbjct: 488 VFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSV 547
Query: 240 DRY-----------LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
D + L + + +L + Y+ I C C+V+ ++ A M++ ++ P
Sbjct: 548 DIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTP 607
Query: 289 NLVTFNTLI 297
+ + ++I
Sbjct: 608 SEDVYTSII 616
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 112/494 (22%), Positives = 221/494 (44%), Gaps = 35/494 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ PS + L++ + F+ + +P ++T++ +I G CR G +
Sbjct: 15 VGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHL 74
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L+ M PN + Y I+I+ C R ++ +M ER P T
Sbjct: 75 GESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTF----- 129
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
NT++ EA + + + G+ P
Sbjct: 130 ------------------------------NTVINAFCKEGNVVEARKLFDGLKEMGFSP 159
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + V ++++ + + K+G+ P T+ +L+ YK GR+ +GDR L
Sbjct: 160 NAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLL 219
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ L+ + + +++ + C +D A E +M ++ ++P+++ FN++I+ + +
Sbjct: 220 KDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQA 279
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
K E +++ G P T +S++ L R ++A + + +M+E G+ N + +
Sbjct: 280 GLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAF 339
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+L+ GDV + L+ +M+ I PD+ F+A I + +E+A F ML
Sbjct: 340 TVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLR 399
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL P+NF+Y++LI K G+ +EA + M G PD +T+N+I+ L +QGR
Sbjct: 400 KGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRS 459
Query: 484 AHDIVKTSKERGIS 497
A ++ + G+S
Sbjct: 460 AINVFMDMHQTGLS 473
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 206/444 (46%), Gaps = 45/444 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G SP+ +YN +++ VK ID A + +++M PD T+NIL+ G + G ++
Sbjct: 155 MGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREED 214
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
RL+K + LG P+ + I + G C A R+ E L M E+ + P+ S++
Sbjct: 215 GDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIA 274
Query: 124 GVFRCLDPHKAFE---LLIRF-MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+ KAFE L++ F + P T C++LL LS N EA ++ +M ++
Sbjct: 275 AYSQAGLEDKAFEAYKLMVHFGLTPSPST----CSSLLMGLSINGRLQEATELIGQMIEK 330
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G + +TV +LD F KRG DV G
Sbjct: 331 GL--SVNNMAFTV--------------LLDKFFKRG--------------------DVVG 354
Query: 240 DRYLNHVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ L + R + +V +++ ID K +++ A + EM + + PN +N+LI
Sbjct: 355 AQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLIC 414
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G CK ++++ +L ++ G PD FT N +I LC+ R A++ +M + G+ P
Sbjct: 415 GFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSP 474
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ ITYN LI C D+ + L +M A +PD+ T+N I FC ++ +A
Sbjct: 475 DIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLML 534
Query: 419 FSMLTLGLRPDNFSYSALIKALIK 442
+++ G+ +F+ + A K
Sbjct: 535 DELVSAGILSFSFACPPTLNAHTK 558
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 204/483 (42%), Gaps = 6/483 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P ++ +I + I L M C+P+ F YNI+I+ C G +A
Sbjct: 51 GPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDA 110
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L M G P V T+ +I+ FC V E ++ + +KE PN +L++G
Sbjct: 111 LAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNG 170
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A L ++ + N L+ + +L+ + G LP+
Sbjct: 171 YVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPD 230
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG---RDVEGDR 241
S FD +V+ L L+E L +++G+ P + ++ A +AG + E +
Sbjct: 231 RSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYK 290
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ H S +S M + + + ATE+ +M ++ ++ N + F L+
Sbjct: 291 LMVHFGLTPSPSTCSSLLMGLSINGR---LQEATELIGQMIEKGLSVNNMAFTVLLDKFF 347
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K +V + L + G PD F++ ID L + E+A + EM+ G+ PN
Sbjct: 348 KRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNF 407
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
YN LI C G + +L+L + M+ + PDI+T N +I C+ ++ A F M
Sbjct: 408 AYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDM 467
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
GL PD +Y+ LI K+ A M +G NPD T N+ + R
Sbjct: 468 HQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRM 527
Query: 482 EEA 484
A
Sbjct: 528 NRA 530
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 187/408 (45%), Gaps = 9/408 (2%)
Query: 100 FRVLEI---MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTL 156
F+ LEI M+E V P+ + V L + R D ++L + R P K + +
Sbjct: 3 FQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGI 62
Query: 157 LYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV---TCLVTGLDLNETCGILDTFIK 213
+ ++L M + E + F Y + C + G ++ + I+
Sbjct: 63 ILGFCRKGCIHLGESLLHLMPK--FHCEPNAFAYNIVINACCIRG-RTSDALAWFNLMIE 119
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
RG P T+ ++ A K G VE + + + + N YN +++ + K+ +D+
Sbjct: 120 RGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQ 179
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + EMR + IAP+ +TFN L+SGH K LL + G PD+ F+ +
Sbjct: 180 ANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVS 239
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
LC A R ++A++ L +M+E G+ P+ I +N +I + G ++ ++ M ++P
Sbjct: 240 GLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTP 299
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
T ++L+ ++++A + M+ GL +N +++ L+ K G A+ +
Sbjct: 300 SPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLW 359
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
ME+ G PD + ++ L +QG EEA+++ +G+ +F
Sbjct: 360 GEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNF 407
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 219/487 (44%), Gaps = 48/487 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G + + + N ++ LVK+ +L + +++M + P T+ LI G CR G +
Sbjct: 141 VGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLR 200
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + +M G P V YTILI G C+ ++ E + M+E V PN T +L+
Sbjct: 201 AQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMD 260
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G C +L+N A +A + + M G +P
Sbjct: 261 G--YC------------------------------KLAN---AKQALRLYQDMLGEGLVP 285
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF + L ++ + IK V P + Y L++A K G E
Sbjct: 286 DVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALF 345
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + +V +Y+++I C V+ + A I +M I N VT+N+LI G CK+
Sbjct: 346 LELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKE 405
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ K E+ + E G +P+ TF+++ID C+ + A+ SEMV + P+ +TY
Sbjct: 406 GKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTY 465
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+I C G + +L+L+ M + I+P+ YT + L+ C+ KI A + F +
Sbjct: 466 TAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIE 525
Query: 424 L----------GLRP---DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
G +P ++ +Y+ALI L + G+F +A + F M + G PD +
Sbjct: 526 FQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVV 585
Query: 471 ILETLVQ 477
+L L Q
Sbjct: 586 MLRGLFQ 592
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/502 (25%), Positives = 214/502 (42%), Gaps = 50/502 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SPS + +ID + + A F +M V P Y ILI G+C ++EA
Sbjct: 177 GLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEA 236
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + M +G PNVYTY L+DG+C + R+ + M + P+ T L+ G
Sbjct: 237 ESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDG 296
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + A L + ++ V N+L+ SEA A+ ++
Sbjct: 297 LCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLEL-------- 348
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F+ V P TY +L+ L R E
Sbjct: 349 -ERFE--------------------------VSPDVFTYSILIRGLCSVSRTEEAGNIFE 381
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K+ +++N +YN +ID CK MD+A EIC +M + + PN++TF+TLI G+CK
Sbjct: 382 KMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIR 441
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + ++ PD T+ +MID C+ ++AL S+M++ G+ PN T +
Sbjct: 442 NLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTIS 501
Query: 365 ILIRSLCAIGDVARSLRLFQ---KMQADRISPDI----------YTFNALIQSFCRMNKI 411
L+ LC G ++ +L LF + Q R + D + ALI C+ +
Sbjct: 502 CLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQF 561
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
KA K F M GL+PD Y +++ L + M + G P+S ++
Sbjct: 562 SKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI--LMMLHADMLKFGVIPNSAVHVIL 619
Query: 472 LETLVQQGRFEEAHDIVKTSKE 493
E + G + A + K +E
Sbjct: 620 CECYQESGFLKSAQNCSKDLEE 641
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 222/486 (45%), Gaps = 44/486 (9%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLA-YLKFQQMSVDQCKPDRFTYNI---LIHGICRIGVV 61
+S + L N ++ LVKS+ A L F ++S + K +FT N+ LI +C++ +V
Sbjct: 74 LSHARYLLNDLVQNLVKSHKPYHACQLAFSELS--RLKSSKFTPNVYGELIIVLCKMELV 131
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
+EAL + + +G A + +L+ R ++R+ E M + P+ T +L
Sbjct: 132 EEALSMYHK---VGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTL 188
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ G R D +A E+ + + +V L+ L +++ EA ++ R M + G
Sbjct: 189 IDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVG- 247
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
V P TY LM+ K + R
Sbjct: 248 ----------------------------------VYPNVYTYNTLMDGYCKLANAKQALR 273
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + LV +V ++ ++ID CK M A + M + PN+ +N+LI +C
Sbjct: 274 LYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYC 333
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K +V + L + L PD FT++ +I LC R E+A + +M + G+ N++
Sbjct: 334 KVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSV 393
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN LI C G + ++L + +M + + P++ TF+ LI +C++ ++ A + M
Sbjct: 394 TYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEM 453
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ L PD +Y+A+I K G EA + + M NG P+ YT + +L+ L + G+
Sbjct: 454 VIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKI 513
Query: 482 EEAHDI 487
+A ++
Sbjct: 514 SDALEL 519
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 123/243 (50%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+ + N+++ K + I EM ++P+++TF TLI G C+ ++ + +E+
Sbjct: 146 TIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMF 205
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ G P + +I LC ++ E+A M E GV PN TYN L+ C +
Sbjct: 206 DEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKL 265
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
+ ++LRL+Q M + + PD+ TF LI C+ +++ A F +M+ + P+ Y
Sbjct: 266 ANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVY 325
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
++LI A K G EA FL +E+ +PD +T ++++ L R EEA +I + +
Sbjct: 326 NSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTK 385
Query: 494 RGI 496
GI
Sbjct: 386 EGI 388
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
++++ + +P++Y LI C+M +E+A + +G + + L+ L+K
Sbjct: 105 LSRLKSSKFTPNVY--GELIIVLCKMELVEEALSMYHK---VGAALTIQACNVLLYVLVK 159
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+GRF+ + + M NG +P T +++ +QG A ++ + +GI
Sbjct: 160 TGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGI 213
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 225/495 (45%), Gaps = 10/495 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P +YN++I A ++ A M P R TYN +I+ G +AL L
Sbjct: 188 PDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALEL 247
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
K+M G P++ T+ I++ F N + ++ E+MK N+ P+ T+ ++H + +
Sbjct: 248 CKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVK 307
Query: 128 CLDPHKAFELLIRFMEREPLTQ----KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+A ELL RE TQ + ++++ + A+ M G P
Sbjct: 308 DGQYGEAIELLNSM--REKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKP 365
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+++ + + + GI + G++P +Y L+ A ++G+ +
Sbjct: 366 NIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAF 425
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS--GHC 301
+ K+ N+ SYN +ID + M A + EM I P++V+ +TL++ G C
Sbjct: 426 KEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRC 485
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ ++ K +L G K + +NS I + AL+ + M+ V P+ +
Sbjct: 486 R--QITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAV 543
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYNILI LC +G A SL+ F+ M RI +++LI S+ + K+ +AE F SM
Sbjct: 544 TYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSM 603
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G PD +Y+A+I+A G + A F ME N PD+ + ++E L + +
Sbjct: 604 KESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQH 663
Query: 482 EEAHDIVKTSKERGI 496
E +++ KE+ I
Sbjct: 664 ERVLQLMELMKEKCI 678
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/461 (21%), Positives = 183/461 (39%), Gaps = 38/461 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P +N V+ A + A F+ M PD FT NI+IH + + G EA
Sbjct: 255 GVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEA 314
Query: 65 LRLVKQM--EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+ L+ M + P+V TYT ++ + +V + V ++M V PN +
Sbjct: 315 IELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSY---- 370
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
N LL ++ M ++A I + + G
Sbjct: 371 -------------------------------NALLGAYASRGMHADALGIFKLLKQNGLR 399
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ ++ + + K +P +Y L++A AG E
Sbjct: 400 PDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISL 459
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L+ + KD + +V S + ++ + + + I + R I N+V +N+ I +
Sbjct: 460 LHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLN 519
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ K EL +++ PD T+N +I LC+ ++ ++L +MV+ +P
Sbjct: 520 FGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEV 579
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y+ LI S G + + F M+ PD+ T+ A+I+++ A F M
Sbjct: 580 YSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEME 639
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
++PD S+L++AL + + + Q + + + C P
Sbjct: 640 GNTVQPDAIICSSLMEALNRGSQHERVLQ-LMELMKEKCIP 679
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/504 (20%), Positives = 192/504 (38%), Gaps = 37/504 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQM--SVDQCKPDRFTYNILIHGICRIGVVDE 63
I+P T N VI LVK A M QC PD TY ++H G V++
Sbjct: 291 IAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVED 350
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ M G PN+ +Y L+ + + A+ + +++K+ + P+ + +L++
Sbjct: 351 CKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLN 410
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
R P KA E + + N L+ + M EA ++L +M G P
Sbjct: 411 AYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPP 470
Query: 184 E----------------------------SSTFDYTVTCLVTGL-------DLNETCGIL 208
+ S + C +G+ D + +
Sbjct: 471 DVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELY 530
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ V P TY +L+ L K G+ E ++ + R+ Y+ +I + K
Sbjct: 531 AVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQ 590
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+ A M++ P+++T+ +I + D +L + +PD
Sbjct: 591 GKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIIC 650
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+S+++ L R + E L + M E +P N Y +I S + D + + + + +
Sbjct: 651 SSLMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIASCSMLRDWKTASEIIEHLDS 710
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
S + T N L+ + K E K F+ M++ +Y+ L++ L+ G++ +
Sbjct: 711 SLSSISVGTLNHLLTFLGKCGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNLLAVGKWRK 770
Query: 449 AKQTFLSMEQNGCNPDSYTSNLIL 472
+ ME G +P Y +L
Sbjct: 771 YIEVLQWMEDAGVSPTLYMYQNVL 794
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/414 (20%), Positives = 167/414 (40%), Gaps = 12/414 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y +++A +S + A F++M + C+P+ +YN LI G+ EA
Sbjct: 397 GLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEA 456
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +ME G P+V + + L+ +++ ++ +LE K R + N S +
Sbjct: 457 ISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGS 516
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
D KA EL M + N L+ L +E+ M D
Sbjct: 517 YLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLT 576
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL-----YKAGRDVEG 239
+ + V L E + + G P TY ++EA ++ D+
Sbjct: 577 KEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFK 636
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ N V D ++ + +++ + + +R ++ M+++ I N + +I+
Sbjct: 637 EMEGNTVQPDAIICSS-----LMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIAS 691
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKF-TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
C KT ++ L+ T N ++ L + + E + +M+
Sbjct: 692 -CSMLRDWKTASEIIEHLDSSLSSISVGTLNHLLTFLGKCGKTECMMKLFYKMMSSCSTV 750
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
TY +L+R+L A+G + + + Q M+ +SP +Y + ++ R N ++
Sbjct: 751 GVSTYTVLLRNLLAVGKWRKYIEVLQWMEDAGVSPTLYMYQNVLPYIWRDNSMD 804
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 106/226 (46%), Gaps = 38/226 (16%)
Query: 271 MDRATEICREMRDRD--IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+ A + R M++++ A N + + +I H + +++ + R L + E KPD +
Sbjct: 135 LQHAVHVFRWMKNQENYCARNDI-YGMMIRLHARHSQIDQARGLFFEMQEWRCKPDADIY 193
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
NS+I RA ++ A++ + +M+ +PP+ TYN +I + A G+ ++L L +KM
Sbjct: 194 NSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTR 253
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ G+ PD +++ ++ A ++ +
Sbjct: 254 N-----------------------------------GVGPDLVTHNIVLSAFKNGSQYSK 278
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
A F M+ PD++T N+++ LV+ G++ EA +++ + +E+
Sbjct: 279 AIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREK 324
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%)
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y ++IR + ++ LF +MQ R PD +N+LI + R + A ML
Sbjct: 158 YGMMIRLHARHSQIDQARGLFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDML 217
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ P +Y+ +I A +G + +A + M +NG PD T N++L ++
Sbjct: 218 RAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYS 277
Query: 483 EAHDIVKTSKERGISFKSF 501
+A + K I+ +F
Sbjct: 278 KAIAYFEMMKGANIAPDTF 296
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 58/135 (42%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L I + +Y+++I + VK + A F M C PD TY +I G
Sbjct: 571 LRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRN 630
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L K+MEG P+ + L++ + V +++E+MKE+ + N+ ++
Sbjct: 631 AWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIA 690
Query: 124 GVFRCLDPHKAFELL 138
D A E++
Sbjct: 691 SCSMLRDWKTASEII 705
>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 578
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 243/510 (47%), Gaps = 23/510 (4%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + ++ + K A + M P T+NILI+ C +G +D A +
Sbjct: 52 PSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFSV 111
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ G PNV T+T L+ GFC ++ + + + M R + ++ +L++G+ +
Sbjct: 112 MGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCK 171
Query: 128 CL--DPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
P A +LL + ER+ + L+ NT+++ L + +EA + KM +G P+
Sbjct: 172 SKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPD 231
Query: 185 SSTFDY------------TVTCLVTGLDLN----ETCGILDTFIKRGVKPRFSTYLLLME 228
T+ VT L+ G LN E + + I+RG + Y +LM
Sbjct: 232 IFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMN 291
Query: 229 ALYKAGRDVEGDRYLNHVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
Y V R L H+ +R + +Y +++ +C ++ +D A + M +R +
Sbjct: 292 G-YCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLV 350
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
P++ ++N LI G+CK V + LL + P+ T+NS++D LC++ DA
Sbjct: 351 PDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKL 410
Query: 348 LSEMVE-WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR-ISPDIYTFNALIQSF 405
+ EM PP+ TYNIL+ SLC I V +++ F+ + +R +P+++++N LI
Sbjct: 411 VDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGC 470
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
C+ ++++A F M L PD +Y+ L+ AL + D+A + + G +P+
Sbjct: 471 CKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNL 530
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERG 495
T N+++ L + GR + A I RG
Sbjct: 531 RTYNILINGLHKGGRPKTAQKISLYLSIRG 560
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 129/501 (25%), Positives = 224/501 (44%), Gaps = 62/501 (12%)
Query: 56 CRIGVVDEALRLVKQ-----------------------------------MEGLGYAPNV 80
C+ +D+A+ L + ME G P
Sbjct: 30 CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89
Query: 81 YTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLI- 139
T+ ILI+ FC+ ++ F V+ + + PN T +L+ G C++ L I
Sbjct: 90 VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGF--CVNDKMLDALYIY 147
Query: 140 -RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAI--LRKMGDRGYL-PESSTFDYTVTCL 195
+ R ++ TL+ L + + AA+ L+KM +R + P ++ V L
Sbjct: 148 DEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGL 207
Query: 196 VTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL------NHVFKD 249
++NE + I +G+ P TY L+ L +AG+ E L N V +
Sbjct: 208 CKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEA 267
Query: 250 RLVSNVN----------SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
R + NV +YN++++ +C N + A ++ M +R P+ +T+ L+ G
Sbjct: 268 RELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHG 327
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+C +V + R L ++E G PD +++N +I C+ R +A++ L +M + PN
Sbjct: 328 YCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPN 387
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQ-ADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
ITYN ++ LC G + + +L +M + PD+ T+N L++S CR+ +EKA AF
Sbjct: 388 IITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKA-IAF 446
Query: 419 FSMLTL--GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
F L P+ +SY+ LI K+ R DEA F M PD T N++L+ L
Sbjct: 447 FKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALF 506
Query: 477 QQGRFEEAHDIVKTSKERGIS 497
+ ++A ++ ++GIS
Sbjct: 507 NGQQLDKAIALLVQIVDQGIS 527
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 202/440 (45%), Gaps = 30/440 (6%)
Query: 12 LYNAVIDALVKS--NSIDLAYLKFQQMSVDQ-CKPDRFTYNILIHGICRIGVVDEALRLV 68
LY +I+ L KS A Q+M Q KP+ YN ++HG+C+ G ++EA L
Sbjct: 161 LYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLC 220
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
+M G P+++TY+ LI G C A + EV +L C N
Sbjct: 221 SKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLN-----GFCLNNKV----------- 264
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+A EL +ER + N L+ N+ EA + M +RG P++ T+
Sbjct: 265 ---DEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITY 321
Query: 189 DYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ CL+ +D E + I+RG+ P +Y +L++ K R E L +
Sbjct: 322 TILMHGYCLIDKVD--EARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDM 379
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR-DIAPNLVTFNTLISGHCKDAE 305
F LV N+ +YN V+D CK + A ++ EM P++ T+N L+ C+
Sbjct: 380 FLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIEC 439
Query: 306 VHKTRELLVMLL-ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V K L+ E F P+ +++N +I C+ R ++A++ + M + P+ +TYN
Sbjct: 440 VEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYN 499
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
IL+ +L + +++ L ++ ISP++ T+N LI + + + A+K +
Sbjct: 500 ILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIR 559
Query: 425 GLRPDNFSYSALIKALIKSG 444
G PD +Y +I L K G
Sbjct: 560 GYHPDVKTY--IINELCKGG 577
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F + P YN ++DAL +D A Q+ P+ TYNILI+G+ + G
Sbjct: 488 FKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPK 547
Query: 63 EALRLVKQMEGLGYAPNVYTYTI 85
A ++ + GY P+V TY I
Sbjct: 548 TAQKISLYLSIRGYHPDVKTYII 570
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/535 (24%), Positives = 230/535 (42%), Gaps = 47/535 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P YN I A + + A F QM C PDR TYN L+ + G +EA
Sbjct: 183 GIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEA 242
Query: 65 LRLVKQMEGLGYAPNVYTYTILID-----GFCNA-------------------------- 93
++K+ME G PN+ TY L+ G CNA
Sbjct: 243 ANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSA 302
Query: 94 -KRVAEVFRVLEI---MKERNVCPNEATVRSLV--HGVFRCLDPHKAF-ELLIRFMEREP 146
R +V + +EI M+ N PN T +L+ HG +K F E+++ F + +
Sbjct: 303 YSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHG------KNKNFSEMMVIFEDMQA 356
Query: 147 LTQK---LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
+ + N+LL N M SE + R M G+ P+ +TF+ + ++
Sbjct: 357 CGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQ 416
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
I D ++ G P +T+ L+ AL + GR + L+ + + N +Y ++
Sbjct: 417 ALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLH 476
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
+ +++ E+ + + + T + + K + V + + + + G+
Sbjct: 477 AYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLS 536
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D TFN+MI + + A D + + G+ P+ +TYN L+ G +
Sbjct: 537 DTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATL 596
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
++ A +PD+ ++N +I S+ + ++ A + F M++ G++PD+F+Y+ + +
Sbjct: 597 RECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNG 656
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
G F EA M + GC PD T +++ + G+FEE I+K K +F
Sbjct: 657 GMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSDPNF 711
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 201/485 (41%), Gaps = 36/485 (7%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F+ + + D + Y LI + R EAL +QM+ G P++ TY ++ID +
Sbjct: 105 FKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGK 164
Query: 93 AKRVAE-VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL 151
R E + + E MK + + P+E T + + +A EL + ++
Sbjct: 165 KGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRV 224
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
N LL +EAA +L++M G LP T++ ++ N + D+
Sbjct: 225 TYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSM 284
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+ +G++P TY L+ A +AG+ + N + N ++N +I K
Sbjct: 285 VSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNF 344
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
I +M+ + P++VT+N+L+ K+ + ++ + + GF+PDK TFN +
Sbjct: 345 SEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNIL 404
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
I+ R + AL M++ G P+ T+N L+ +L G + + ++
Sbjct: 405 IEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSY 464
Query: 392 SPDIYTFNALIQSFCRMNKIEK-----------------------------------AEK 416
P+ + +++ ++ ++EK AE
Sbjct: 465 KPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAED 524
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
AF +M G D +++A+I K G D+A TF + G PD T N ++
Sbjct: 525 AFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYG 584
Query: 477 QQGRF 481
++G +
Sbjct: 585 REGMY 589
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/492 (21%), Positives = 196/492 (39%), Gaps = 38/492 (7%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
+PD T +++ + R + RL K + GY +VY YT LI ++ E
Sbjct: 79 RPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEALG 138
Query: 102 VLEIMKERNVCPNEATVRSLV--HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
E MKE P+ T ++ +G + EL + + NT +
Sbjct: 139 FFEQMKEAGPQPSLVTYNVIIDLYGK-KGRSWENILELFEEMKAQGIQPDEYTYNTAITA 197
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
++ S+ EA + +M P+ T++ + NE +L G P
Sbjct: 198 CASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPN 257
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
TY L+ A +AG + + + +V +Y ++ + + +++A EI
Sbjct: 258 IVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYN 317
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
+MR + PN TFN LI H K+ + + + CG +PD T+NS++ +
Sbjct: 318 QMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNG 377
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ + L M + G P+ T+NILI + G ++L ++ M +PD+ TFN
Sbjct: 378 MYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFN 437
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF------------- 446
L+ + R + E AE + +P++ +Y++++ A G
Sbjct: 438 TLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTI 497
Query: 447 ----------------------DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
DEA+ FL+M +G D+ T N ++ ++G ++A
Sbjct: 498 YVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKA 557
Query: 485 HDIVKTSKERGI 496
D + G+
Sbjct: 558 TDTFALLRSTGL 569
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 3/229 (1%)
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ + + +R+ ++ + +LIS ++ + + + E G +P T+N +ID
Sbjct: 102 SRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDL 161
Query: 335 LCRAHR-FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV-ARSLRLFQKMQADRIS 392
+ R +E+ L+ EM G+ P+ TYN I + CA G + + LF +M++ +
Sbjct: 162 YGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITA-CASGSLCEEATELFTQMKSSNCT 220
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PD T+NAL+ + + +A M + G P+ +Y+ L+ A ++G + A +
Sbjct: 221 PDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEM 280
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
SM G PD +T +L + G+ E+A +I + + SF
Sbjct: 281 KDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSF 329
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P YN VI + K + A F +M + +PD FTYN + G+ EA
Sbjct: 603 GQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEA 662
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
L +VK M G P+ TY L+D +C + EV R+L+ +K + ++A R +
Sbjct: 663 LSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSDPNFSKAAYRRIA 720
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 231/527 (43%), Gaps = 41/527 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS Y +VI A VK +++ A +M D + LI G C+ + AL L
Sbjct: 301 PSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDL 360
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ME G +PN T+++LI+ F + + + M+ + P+ V +++ G +
Sbjct: 361 FYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLK 420
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+A +L E L +CNT+L L +A +LRKM RG P +
Sbjct: 421 GQKHEEALKLFDESFET-GLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVS 479
Query: 188 FDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK------------- 232
++ + C +DL T + +++G+KP TY +L++ +K
Sbjct: 480 YNNVMLAHCRKKNMDLART--VFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQ 537
Query: 233 ---AGRDVEGDRY--------------------LNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+ +V G Y N + + R + SYN +ID F K
Sbjct: 538 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEG 597
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
MD A EM I+PN++T+ +L+ G CK+ + + E+ + G K D +
Sbjct: 598 EMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG 657
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++I C+ E A SE++E G+ P+ YN LI +G++ +L L++KM D
Sbjct: 658 ALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKD 717
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ D+ T+ LI + + A + M +GL PD Y+ ++ L K G+F +
Sbjct: 718 GLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKV 777
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ F M++N P+ N ++ ++G +EA + ++GI
Sbjct: 778 VKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 824
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 118/501 (23%), Positives = 222/501 (44%), Gaps = 13/501 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P N + ALV+ NSI A + +M D T +L+ R E
Sbjct: 191 LGVIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAE 250
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLV 122
AL + + G P+ Y++ + C +A +L MKE+ +C P++ T S++
Sbjct: 251 ALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVI 310
Query: 123 HGVFRCLDPHKAFELLIRF---MEREPLTQKLVCNTLLY--RLSNNSMASEAAAILRKMG 177
+ E IR+ M + ++ +V T L NN + S A + KM
Sbjct: 311 LASVK----QGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGS-ALDLFYKME 365
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
+ G P S TF + ++ + G+ P +++ K +
Sbjct: 366 NEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHE 425
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E + + F+ L +NV N ++ CK +D+ATE+ R+M R I PN+V++N ++
Sbjct: 426 EALKLFDESFETGL-ANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVM 484
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
HC+ + R + +LE G KP+ +T++ +ID + H ++ L+ +++M +
Sbjct: 485 LAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIE 544
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAEK 416
N + Y +I LC +G +++ L M + R ++N++I F + +++ A
Sbjct: 545 VNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVA 604
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
A+ M G+ P+ +Y++L+ L K+ R D+A + M+ G D ++
Sbjct: 605 AYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFC 664
Query: 477 QQGRFEEAHDIVKTSKERGIS 497
++ E A + E G++
Sbjct: 665 KKSNMESASALFSELLEEGLN 685
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 119/479 (24%), Positives = 205/479 (42%), Gaps = 37/479 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG++PS + +I +K + A LK S + + F N ++ +C+ G +D+
Sbjct: 402 LGLTPSVFHVHTIIQGWLKGQKHEEA-LKLFDESFETGLANVFICNTILSWLCKQGKIDK 460
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+++ME G PNV +Y ++ C K + V M E+ + PN T L+
Sbjct: 461 ATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILID 520
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G F+ D E++ + +V T++ L S+A +L M +
Sbjct: 521 GCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKR-- 578
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ V+C+ I+D FIK G E Y E
Sbjct: 579 ------FCVSCMSYN-------SIIDGFIKEG------------EMDYAVAAYEE----- 608
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + NV +Y ++D CK N MD+A E+ EM+++ + ++ + LI G CK
Sbjct: 609 --MCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKK 666
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + L LLE G P + +NS+I ALD +M++ G+ + TY
Sbjct: 667 SNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTY 726
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI L G++ + L+ +MQA + PD + ++ + + K K F M
Sbjct: 727 TTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKK 786
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ P+ Y+A+I + G DEA + M G PD T ++++ V G+F+
Sbjct: 787 NNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGKV--GKFQ 843
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/300 (19%), Positives = 114/300 (38%), Gaps = 78/300 (26%)
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP----- 323
N++D A E+ R FN L++ + KD + +++ +LE G P
Sbjct: 148 NLVDSAKLFGFEVNSR-------AFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYV 200
Query: 324 ------------------------------DKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
D T ++ R + +AL+ S +E
Sbjct: 201 NRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIE 260
Query: 354 WGVPPNTITYNILIRSLCAI------------------------------------GDVA 377
G P+++ Y++ +++ C G++
Sbjct: 261 RGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNME 320
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
++R +M +D IS ++ +LI C+ N + A F+ M G P++ ++S LI
Sbjct: 321 DAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLI 380
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ K+G ++A + + ME G P + + I++ ++ + EEA + S E G++
Sbjct: 381 ERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA 440
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 61/125 (48%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y +ID L+K ++ LA + +M PD Y ++++G+ + G + +++ ++M+
Sbjct: 726 YTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMK 785
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
PNV Y +I G + E FR+ + M ++ + P+ AT LV G P
Sbjct: 786 KNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGKVGKFQPI 845
Query: 133 KAFEL 137
+A L
Sbjct: 846 RAASL 850
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 222/486 (45%), Gaps = 14/486 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P+ ++YN ++DA++ N + + M D +P+ +TYNIL+ +C+ VD
Sbjct: 143 FGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDG 202
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +L+ +M G P+V +YT +I +V E R L I + PN + +L++
Sbjct: 203 ACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA-RELSIRFQ----PNVSVYNALIN 257
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G R + F LL + +E+ + +T++ LS A A+ KM RG P
Sbjct: 258 GFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSP 317
Query: 184 ESSTFDYTVTCLVTGLDLN----ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
YT T L+ G + E I + + G +P Y L+ L G+ E
Sbjct: 318 NV----YTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEA 373
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + ++ NV++Y +ID F K + A+EI +M PN+V + ++++
Sbjct: 374 VSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNV 433
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
C+ + + L+ + P+ TFN+ I LC + R E A++ +M ++G PN
Sbjct: 434 LCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPN 493
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
TYN ++ L + +L L +M+ + ++ T+N + FC + K E+A K
Sbjct: 494 IKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLG 553
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG-CNPDSYTSNLILETLVQQ 478
ML G++PD +Y+ L A G+ A Q + G P+ +L + Q
Sbjct: 554 KMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQ 613
Query: 479 GRFEEA 484
EEA
Sbjct: 614 IGVEEA 619
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 211/480 (43%), Gaps = 5/480 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GIS S L+ VI+ + + A F ++ C+P YN L+ +
Sbjct: 109 GISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMI 168
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M+ G PNVYTY IL+ C RV ++L M + P+ + +++
Sbjct: 169 EPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISS 228
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A EL IRF +P V N L+ E +L +M ++G P
Sbjct: 229 MSKLGKVEEARELSIRF---QPNVS--VYNALINGFCREYKVKEVFLLLGQMVEKGIDPN 283
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ ++ L ++ + RG P T+ LM+ + GR +E N
Sbjct: 284 VITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWN 343
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ NV +YN +I C M A + +M +PN+ T+ LI G K
Sbjct: 344 RMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAG 403
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ E+ ++ G P+ + SM++ LCR+ F A + +M PPNT+T+N
Sbjct: 404 DLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFN 463
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+ LC G V ++ LF +M+ SP+I T+N ++ + N+I++A + M
Sbjct: 464 TFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEK 523
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ + +Y+ + G+F+EA + M G PD+ T N + QG+ + A
Sbjct: 524 GMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTA 583
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 192/472 (40%), Gaps = 76/472 (16%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN ++ AL K+N +D A +MS C+PD +Y +I + ++G V+EA
Sbjct: 179 GKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA 238
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + + PNV Y LI+GFC +V EVF +L M E+ + PN T +++
Sbjct: 239 REL-----SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISS 293
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A + + R +L+ EA I +M + G+ P
Sbjct: 294 LSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPN 353
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + L + + E + + G P STY L++ KAG V N
Sbjct: 354 VVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWN 413
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC--- 301
+ + + NV Y +++ C+ +M +A + +M + PN VTFNT I G C
Sbjct: 414 KMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSG 473
Query: 302 --------------------------------KDAEVHKTRELLVMLLECGFKPDKFTFN 329
K+ + + EL+ + E G + + T+N
Sbjct: 474 RVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYN 533
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++ C +FE+AL L +M+ GV P+ ITYN L + C G V +++L K+ A
Sbjct: 534 TIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAG 593
Query: 390 -RISPDIY-----------------------------------TFNALIQSF 405
+ P++ T+NAL++
Sbjct: 594 GKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGL 645
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 208/488 (42%), Gaps = 44/488 (9%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVD--QCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
Y +I+ L + +D QQM ++ C D F +I+ R+G+ ++AL++ +
Sbjct: 82 YQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFIN--VINTYRRVGLAEQALKMFYR 139
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
+ G P V Y L+D + R + + MK PN T
Sbjct: 140 IREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTY------------ 187
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
N LL L N+ A +L +M ++G P+ ++
Sbjct: 188 -----------------------NILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTT 224
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
++ + + E + F +P S Y L+ + + E L + +
Sbjct: 225 VISSMSKLGKVEEARELSIRF-----QPNVSVYNALINGFCREYKVKEVFLLLGQMVEKG 279
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+ NV +Y+ VI + ++ A + +M R +PN+ TF +L+ G+ V +
Sbjct: 280 IDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEAL 339
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+ + E GF+P+ +N++I LC + +A+ S+M G PN TY LI
Sbjct: 340 NIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGF 399
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
GD+ + ++ KM + P++ + +++ CR + +A M T P+
Sbjct: 400 AKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNT 459
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+++ IK L SGR + A F MEQ GC+P+ T N +L+ L+++ R +EA ++V
Sbjct: 460 VTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTE 519
Query: 491 SKERGISF 498
+E+G+
Sbjct: 520 MEEKGMEL 527
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 68/161 (42%), Gaps = 36/161 (22%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYL----------------------------KFQQ- 35
G SP+ + YN V+D L+K N I A KF++
Sbjct: 489 GCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEA 548
Query: 36 ------MSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLG-YAPNVYTYTILID 88
M V KPD TYN L + C G V A++L+ ++ G + P V YT L+
Sbjct: 549 LKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLW 608
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
G CN V E L+ M +C N AT +LV G+F L
Sbjct: 609 GICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSL 649
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 83/167 (49%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
F+ + T+ MI+ L R + L +M G+ + + +I + +G ++L
Sbjct: 75 FQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQAL 134
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
++F +++ P + +N L+ + N+ + E + +M G P+ ++Y+ L+KAL
Sbjct: 135 KMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKAL 194
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
K+ R D A + + M GC PD + ++ ++ + G+ EEA ++
Sbjct: 195 CKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL 241
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 220/474 (46%), Gaps = 22/474 (4%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN----AKRVAEV 99
D N L+ G C +G+V AL LV+ G P++ TY L++ FC AK + V
Sbjct: 144 DAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVV 203
Query: 100 FRVLEIMKE-----------------RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFM 142
+L ++ R++ P T +L+ + F L + +
Sbjct: 204 NEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMI 263
Query: 143 EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
+ + C+++LY L + +EAA +LR+M + G P ++ ++ L+ +
Sbjct: 264 MSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVM 323
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
E + RG+ +M+ L+KAG+ E + + K LV N +Y ++
Sbjct: 324 EAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALL 383
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
D CKV ++ A + ++M + PN+VTF+++I+G+ K ++K E+L +++
Sbjct: 384 DGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIM 443
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P+ F + ++D R + E A EM WG+ N I ++IL+ +L G + + L
Sbjct: 444 PNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSL 503
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
+ + + I D++ +++L+ + + A M ++ D +Y+AL K L++
Sbjct: 504 IKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLR 563
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G++ E K F M + G PD T N ++ T QG+ E A D++ K G+
Sbjct: 564 LGKY-EPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGV 616
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/520 (24%), Positives = 225/520 (43%), Gaps = 37/520 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ Y +I AL+KS + A+ QM V D ++ G+ + G E
Sbjct: 300 MGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKE 359
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + + + L PN TYT L+DG C V VL+ M++ +V PN T S+++
Sbjct: 360 AEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIIN 419
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + +KA E+L + ++ + V LL AA ++M G
Sbjct: 420 GYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEE 479
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD------- 236
+ FD + L + E ++ + +G+ Y LM+ +K G +
Sbjct: 480 NNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVV 539
Query: 237 ---VEGDRYLNHVFKDRLVSNV------------------------NSYNMVIDCFCKVN 269
E D + V + L + +YN V++ +
Sbjct: 540 QEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQG 599
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+ A ++ EM+ + PN+VT+N LI G CK + K +L +L G+ P
Sbjct: 600 KTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHK 659
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++ R+ + + L ++V+ G+ N + YN LI LC +G ++ + +M
Sbjct: 660 FLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIK 719
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
IS DI T+NALI+ +C + +EKA + ML G+ P+ +Y+AL++ L +G +A
Sbjct: 720 GISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDA 779
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+ M + G P++ T N+++ GR D +K
Sbjct: 780 DKLVSEMRERGLVPNATTYNILVSG---HGRVGNKRDSIK 816
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/561 (23%), Positives = 239/561 (42%), Gaps = 71/561 (12%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ + +I A K ID + ++QM + PD T + +++G+CR G + EA
Sbjct: 232 LQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAA 291
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L+++M +G PN +YT +I + RV E F M R + + +++ G+
Sbjct: 292 MLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGL 351
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
F+ +A E+ ++ + + LL A +L+KM LP
Sbjct: 352 FKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNV 411
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL-- 243
TF + LN+ +L ++ + P Y +L++ ++ G+ +
Sbjct: 412 VTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKE 471
Query: 244 --------NHVFKDRLVSNVN----------------SYNMVIDCFCKVNMMD------- 272
N++ D L++N+ S + +D F ++MD
Sbjct: 472 MKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGN 531
Query: 273 --RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
A + +EM ++D+ ++V +N L G + + ++ + + ++E G PD T+NS
Sbjct: 532 ESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGK-YEPKSVFSRMIELGLTPDCVTYNS 590
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+++ + E+ALD L+EM +GV PN +TYNILI LC G + + + + +M A
Sbjct: 591 VMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVG 650
Query: 391 I--SPDIYTF---------------------------------NALIQSFCRMNKIEKAE 415
+P I+ F N LI CR+ +KA
Sbjct: 651 YVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKAN 710
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
M+ G+ D +Y+ALI+ ++A T+ M +G +P+ T N +LE L
Sbjct: 711 VVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGL 770
Query: 476 VQQGRFEEAHDIVKTSKERGI 496
G +A +V +ERG+
Sbjct: 771 STNGLMRDADKLVSEMRERGL 791
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 225/503 (44%), Gaps = 21/503 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ I P+ +Y ++D ++ + A +++M + + ++IL++ + R G + E
Sbjct: 440 MNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKE 499
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L+K + G +V+ Y+ L+DG+ + V++ M E+++ + +L
Sbjct: 500 AQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTK 559
Query: 124 GVFRC--LDPHKAFELLIRF-MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
G+ R +P F +I + + +T V NT + A +L +M G
Sbjct: 560 GLLRLGKYEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQ----GKTENALDLLNEMKSYG 615
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P T++ + L + + +L + G P + L++A Y R +
Sbjct: 616 VMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKA-YSRSRKADAI 674
Query: 241 RYLNHVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
++ D L N YN +I C++ M +A + EM + I+ ++VT+N LI G
Sbjct: 675 LQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRG 734
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+C + V K +L G P+ T+N++++ L DA +SEM E G+ PN
Sbjct: 735 YCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPN 794
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
TYNIL+ +G+ S++L+ +M P T+N LIQ + + K+ +A +
Sbjct: 795 ATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLN 854
Query: 420 SMLTLGLRPDNFSYSALI------------KALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
MLT G P++ +Y LI L+K +EAK+ M + G P T
Sbjct: 855 EMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRLLKLSYQNEAKKLLREMCEKGHVPSEST 914
Query: 468 SNLILETLVQQGRFEEAHDIVKT 490
I G+ ++A ++KT
Sbjct: 915 LMYISSNFSAPGKRDDAKRLLKT 937
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/524 (21%), Positives = 226/524 (43%), Gaps = 36/524 (6%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L + PS L+N ++ S + + + +M + P+ F+ N+L+H +C++G +
Sbjct: 4 LSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGL 63
Query: 64 ALRLVKQMEGLGYAPNVY----TYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
AL GY N TY ++ GFC + F +L M ++ VC + T
Sbjct: 64 AL---------GYLRNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCN 114
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
LV G + A ++ + + NTL+ + S A ++
Sbjct: 115 ILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKN 174
Query: 180 GYLPESSTFDYTVTCLVTGLDL-------NET--------------CGILDTFIKRGVKP 218
G P+ T++ V DL NE CG+ R ++P
Sbjct: 175 GVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQP 234
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYL-NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
T+ L+ A Y R ++ L + ++ +V + + ++ C+ + A +
Sbjct: 235 TVVTWTTLIAA-YCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAML 293
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
REM + + PN V++ T+IS K V + ++ G D +M+D L +
Sbjct: 294 LREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFK 353
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
A + ++A + +++ + PN +TY L+ C +GDV + + QKM+ + + P++ T
Sbjct: 354 AGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVT 413
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
F+++I + + + KA + M+ + + P+ F Y+ L+ ++G+ + A + M+
Sbjct: 414 FSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMK 473
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
G ++ +++L L + G +EA ++K +GI F
Sbjct: 474 SWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVF 517
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 106/486 (21%), Positives = 200/486 (41%), Gaps = 14/486 (2%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN V+ K D + +M D T NIL+ G C+IG+V A ++ +
Sbjct: 78 YNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLV 137
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G G + L+DG+C V+ ++E + V P+ T +LV+ + D
Sbjct: 138 GGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLA 197
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
KA + +V L +R + S + G R P T+ +
Sbjct: 198 KA--------------ESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLI 243
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+++ + + I GV P T ++ L + G+ E L ++ L
Sbjct: 244 AAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLD 303
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
N SY +I K + A +M R I+ +LV T++ G K + + E+
Sbjct: 304 PNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEM 363
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+L+ P+ T+ +++D C+ E A L +M + V PN +T++ +I
Sbjct: 364 FQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAK 423
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G + +++ + +KM I P+++ + L+ + R + E A + M + GL +N
Sbjct: 424 KGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNII 483
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
+ L+ L +SG EA+ + G D + + +++ ++G A +V+
Sbjct: 484 FDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMT 543
Query: 493 ERGISF 498
E+ + F
Sbjct: 544 EKDMQF 549
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 191/442 (43%), Gaps = 30/442 (6%)
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M L P++ + L+ F + V++V + M V PN +V LVH + + D
Sbjct: 1 MRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGD 60
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
A L R + + NT+++ +A + +L +M +G +S T +
Sbjct: 61 LGLALGYL-----RNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNI 115
Query: 191 TVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
V C + + E I+ + GV L++ + G + +K
Sbjct: 116 LVKGYCQIGLVQYAEW--IMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWK 173
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREM----RD-----------------RDIA 287
+ + ++ +YN +++ FCK + +A + E+ RD RD+
Sbjct: 174 NGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQ 233
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
P +VT+ TLI+ +CK + L ++ G PD T +S++ LCR + +A
Sbjct: 234 PTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAML 293
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
L EM G+ PN ++Y +I +L G V + +M IS D+ ++ +
Sbjct: 294 LREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFK 353
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
K ++AE+ F ++L L L P+ +Y+AL+ K G + A+ ME+ P+ T
Sbjct: 354 AGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVT 413
Query: 468 SNLILETLVQQGRFEEAHDIVK 489
+ I+ ++G +A ++++
Sbjct: 414 FSSIINGYAKKGMLNKAVEVLR 435
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/522 (25%), Positives = 233/522 (44%), Gaps = 41/522 (7%)
Query: 4 LGISPSTRLYNAVIDALVK-SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
G PS Y AVI A VK N ++ LK + +SV + L+ G C +G V+
Sbjct: 284 FGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVG-LPMNVIVTRSLMKGYCVLGDVN 342
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
AL+L ++ G P+V +++LI+G + + + + MK + PN V SL+
Sbjct: 343 LALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLL 402
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G A+ L +E +T + N LL L +EA + KM +G
Sbjct: 403 EGFHEQNLLEHAYGLFDEAVEH-GITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGIT 461
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK---------- 232
P +++ + +++ +L + ++RG+KP TY LL++ +K
Sbjct: 462 PSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVV 521
Query: 233 -------------------------AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
GR E LN+ K VS +YN +ID F K
Sbjct: 522 FEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFK 581
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+D A REM + I+P+++T+ +LI G CK ++ E+ + G K D
Sbjct: 582 EGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVA 641
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
++++ID C+ H E A +E+++ G+ PNT+ YN +I + ++ +L L Q+M
Sbjct: 642 YSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMI 701
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+++ D+ + ++I + K+ A + ML+ + PD Y+ LI L +G+ +
Sbjct: 702 KNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLE 761
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA---HD 486
A + M+ N P N+++ ++G +EA HD
Sbjct: 762 NASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHD 803
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 222/485 (45%), Gaps = 5/485 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ Y+ ++ A+ + ++LA ++M P + TY +I + G EA
Sbjct: 250 GLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEA 309
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LRL +M +G NV L+ G+C V ++ + + E V P+ L++G
Sbjct: 310 LRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLING 369
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D KA+EL R + N+LL ++ A + + + G +
Sbjct: 370 CSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG-ITN 428
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L +NE C + + + +G+ P +Y L+ K G + L
Sbjct: 429 VVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLK 488
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L N +Y ++ID F K +RA + +M +IAP TFNT+I+G K
Sbjct: 489 SILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTG 548
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V +T++ L ++ GF T+NS+ID + + AL EM E G+ P+ ITY
Sbjct: 549 RVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYT 608
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI LC + +L + M+ + D+ ++ALI FC+M+ +E A K F +L +
Sbjct: 609 SLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDI 668
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG--CNPDSYTSNLILETLVQQGRFE 482
GL P+ Y+++I I + A M +N C+ YTS I+ L+++G+
Sbjct: 669 GLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTS--IIGGLLKEGKLS 726
Query: 483 EAHDI 487
A D+
Sbjct: 727 LALDL 731
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/487 (24%), Positives = 212/487 (43%), Gaps = 41/487 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ +GI P+ + N++++ + N ++ AY F + +V+ + TYNIL+ + +G
Sbjct: 386 MKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDE-AVEHGITNVVTYNILLKWLGELGK 444
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V+EA L ++M G P++ +Y LI G C + + + +L+ + ER + PN T
Sbjct: 445 VNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTL 504
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G F+ D +AF + +M
Sbjct: 505 LIDGFFKKGDSERAF-----------------------------------VVFEQMMAAN 529
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P TF+ + L ++ET L+ FIK+G TY +++ +K G
Sbjct: 530 IAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSAL 589
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + +V +Y +ID CK N + A E+ +M+ + + ++V ++ LI G
Sbjct: 590 LAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGF 649
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK ++ + LL+ G P+ +NSMI + E AL+ EM++ VP +
Sbjct: 650 CKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDL 709
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
Y +I L G ++ +L L+ +M + I PDI + LI ++E A K
Sbjct: 710 QVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKE 769
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M + P Y+ LI + G EA + M G PD T ++++ G+
Sbjct: 770 MDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILV-----NGK 824
Query: 481 FEEAHDI 487
+ +H +
Sbjct: 825 LKVSHTL 831
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/493 (21%), Positives = 202/493 (40%), Gaps = 36/493 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +R++N ++ + V+ N I A F+ M P N L+ + R +V +A
Sbjct: 145 GFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDA 204
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L +M G + YT +++ + EV + + K R + + A LV
Sbjct: 205 RQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQA 264
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
V R LD + A E +L++M + G++P
Sbjct: 265 VCRRLDLNLACE-----------------------------------LLKEMREFGWVPS 289
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + V + E + D + G+ LM+ G + +
Sbjct: 290 KGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFD 349
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
V + +V +V ++++I+ KV M++A E+ M+ I PN+ N+L+ G +
Sbjct: 350 EVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQN 409
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ L +E G + T+N ++ L + +A + +MV G+ P+ ++YN
Sbjct: 410 LLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYN 468
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C G + ++ + + + + P+ T+ LI F + E+A F M+
Sbjct: 469 NLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAA 528
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ P + +++ +I L K+GR E + + + G S T N I++ ++G + A
Sbjct: 529 NIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSA 588
Query: 485 HDIVKTSKERGIS 497
+ E GIS
Sbjct: 589 LLAYREMCESGIS 601
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 161/352 (45%), Gaps = 8/352 (2%)
Query: 153 CNTLLYRLSNNSMASEAAA-------ILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
C++L + L+N + +L G G+ +S F+Y + V + +
Sbjct: 111 CSSLQFLLNNYVFGDATPSAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAV 170
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
T ++ + P L+ A+ + + + + + + + + + ++V+
Sbjct: 171 ECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRAC 230
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
K + + +E + R + + ++ L+ C+ +++ ELL + E G+ P K
Sbjct: 231 MKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSK 290
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T+ ++I + F +AL EMV G+P N I L++ C +GDV +L+LF +
Sbjct: 291 GTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDE 350
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
+ + PD+ F+ LI ++ +EKA + + M +G++P+ F ++L++ +
Sbjct: 351 VVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNL 410
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ A F ++G + T N++L+ L + G+ EA ++ + +GI+
Sbjct: 411 LEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGIT 461
>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
Length = 867
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/531 (23%), Positives = 228/531 (42%), Gaps = 41/531 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ S Y +VI A VK +++ A +M L++G C+ + +
Sbjct: 304 LGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGK 363
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L +ME G AP+ ++++++ FC + + MK + P+ V +++
Sbjct: 364 ALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQ 423
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + P A E+ E + +CN + A + L+ M +G P
Sbjct: 424 GCLKAESPEAALEIFNDSFESW-IAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEP 482
Query: 184 ESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK--------- 232
++ + C + +DL + I +++G++P TY +L++ +K
Sbjct: 483 NVVFYNNMMLAHCRMKNMDLARS--IFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWD 540
Query: 233 --------------------------AGRDVEGDRYLNHVFKDRLVS-NVNSYNMVIDCF 265
G+ + L ++ K++ S + SYN +ID F
Sbjct: 541 VINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGF 600
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
KV D A E REM + +PN+VTF +LI+G CK + E+ + K D
Sbjct: 601 VKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDL 660
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
+ ++ID C+ + + A SE+ E G+ PN YN LI +G + ++ L++K
Sbjct: 661 PAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKK 720
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M D IS D++T+ +I + I A + +L LG+ PD + L+ L K G+
Sbjct: 721 MVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQ 780
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
F +A + M++ P+ + ++ ++G EA + E+GI
Sbjct: 781 FLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/532 (20%), Positives = 214/532 (40%), Gaps = 44/532 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P N V+ +LV+SN ID A + +M + D T +L+ R +EA+
Sbjct: 200 VVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAV 259
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCP-NEATVRSLVHG 124
++ +++ G P+ +++ + C + +L M+ + P ++ T S++
Sbjct: 260 KIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVA 319
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A ++ + + +L+ + +A + +M + G P+
Sbjct: 320 FVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPD 379
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F V +++ + F R R + +L+ + + E
Sbjct: 380 KVMFSVMVEWFCKNMEMEKAI----EFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAAL 435
Query: 245 HVFKDRLVSNVNSY---NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+F D S + N + FCK +D AT + M + I PN+V +N ++ HC
Sbjct: 436 EIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHC 495
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ + R + +LE G +P+ FT++ +ID + ++A D +++M N +
Sbjct: 496 RMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEV 555
Query: 362 TYNILIRSLCAIGDVARSLRLFQ------------------------------------K 385
YN +I LC +G +++ + Q +
Sbjct: 556 IYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYRE 615
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M + SP++ TF +LI FC+ N+++ A + M ++ L+ D +Y ALI K
Sbjct: 616 MSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKND 675
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
A F + + G P+ N ++ G+ + A D+ K GIS
Sbjct: 676 MKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGIS 727
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/473 (24%), Positives = 197/473 (41%), Gaps = 35/473 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+PS+ L + +I +K+ S + A F S + F N + C+ G VD A
Sbjct: 411 IAPSSVLVHTMIQGCLKAESPEAALEIFND-SFESWIAHGFMCNKIFLLFCKQGKVDAAT 469
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+K ME G PNV Y ++ C K + + M E+ + PN T L+ G
Sbjct: 470 SFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGF 529
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
F+ D A++++ + +++ NT++ L S+A +L+ + + E
Sbjct: 530 FKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL-----IKEK 584
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
Y+++C I+D F+K G VE R ++
Sbjct: 585 R---YSMSC-------TSYNSIIDGFVKVG----------------DTDSAVETYREMSE 618
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
K NV ++ +I+ FCK N MD A E+ EM+ ++ +L + LI G CK +
Sbjct: 619 NGKS---PNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKND 675
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ L L E G P+ +NS+I + + A+D +MV G+ + TY
Sbjct: 676 MKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTT 735
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+I L G++ + L+ ++ I PD L+ + + KA K M
Sbjct: 736 MIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKD 795
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+ P+ YS +I + G +EA + M + G D NL++ V++
Sbjct: 796 VTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEK 848
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 116/249 (46%), Gaps = 1/249 (0%)
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
++V V N V+ + N++D A EI +M +A + VT L+ ++ + +
Sbjct: 199 KVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEA 258
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM-VEWGVPPNTITYNILIR 368
++ ++ G +PD F+ + C+ ALD L EM + GVP + TY +I
Sbjct: 259 VKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIV 318
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
+ G++ ++R+ +M I + +L+ +C+ N++ KA F M GL P
Sbjct: 319 AFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAP 378
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
D +S +++ K+ ++A + ++ M+ P S + +++ ++ E A +I
Sbjct: 379 DKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIF 438
Query: 489 KTSKERGIS 497
S E I+
Sbjct: 439 NDSFESWIA 447
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 86/170 (50%), Gaps = 1/170 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ +YN++I +D A +++M D D FTY +I G+ + G ++
Sbjct: 689 LGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINL 748
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L ++ LG P+ + +L++G + + ++LE MK+++V PN +++
Sbjct: 749 ASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIA 808
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAI 172
G R + ++AF L +E+ + V N L+ R+ AS+ +++
Sbjct: 809 GHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEKPPAASKISSL 858
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
GF+ FN +++ R R + A+DC MV+ V P N ++ SL + +
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
++ KM ++ D T L+++ R K E+A K F +++ G PD +S ++A
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNP---DSYTSNLILETLVQQGRFEEA 484
K+ A M P ++YTS ++ V++G EEA
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTS--VIVAFVKEGNMEEA 329
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%)
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
FN L+ ++ R +++ A F M+ + P + ++ +L++S DEAK+ + M
Sbjct: 171 AFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM 230
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G D+ T+ L++ +++ + EEA I + RG
Sbjct: 231 VLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRG 269
>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 938
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 223/495 (45%), Gaps = 17/495 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLA--YLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
G+SP N +I +L K + A L+ + +SVD TYN +I G+C G+ D
Sbjct: 124 GVSPDVFALNVLIHSLCKVGQLSFAISLLRNRVISVDTV-----TYNTVISGLCEHGLAD 178
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA + + +M +G P+ ++ LIDGFC A +++ + E N+ + + S
Sbjct: 179 EAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISELNLITHTILISSYY 238
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ A E R M +V ++++ RL + E +LR+M + G
Sbjct: 239 N--------LHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGV 290
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P T+ V L D + + RG+ Y +LM L+KAG E ++
Sbjct: 291 YPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEK 350
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ +D V NV +Y ++D CK + A I +M ++ + PN+VT++++I+G+
Sbjct: 351 TFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYV 410
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + + L+ + + P+ FT+ ++ID L +A + E A + EM GV N
Sbjct: 411 KKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNY 470
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
+ L+ L IG + L + M + ++ D + +LI F + E A M
Sbjct: 471 ILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEM 530
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ D SY+ LI L+K G+ A + M + G PD T N+++ + +QG F
Sbjct: 531 QEKEMPWDVVSYNVLISGLLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDF 589
Query: 482 EEAHDIVKTSKERGI 496
E + K GI
Sbjct: 590 EGILKLWDKMKSCGI 604
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/526 (23%), Positives = 233/526 (44%), Gaps = 50/526 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ Y ++D+L K+ A + QM V D Y +L+ G+ + G + E
Sbjct: 288 MGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLRE 347
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + K + PNV TYT L+DG C A ++ ++ M E++V PN T S+++
Sbjct: 348 AEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMIN 407
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTL---LYRLSNNSMASEAAAILRKMGDRG 180
G + +A L+ + ++ + T+ L++ +ASE + +R +G
Sbjct: 408 GYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIG--- 464
Query: 181 YLPESSTFDYTVTCLVTGLD----LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
+ E+ +Y + LV L + E G++ + +GV Y L++ +K G +
Sbjct: 465 -VEEN---NYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDE 520
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
+ + + + +V SYN++I K + A + MR++ I P++ TFN +
Sbjct: 521 EAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKVG-ADWAYKGMREKGIEPDIATFNIM 579
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
++ K + +L + CG KP N ++ LC + ++A+D L +M+ +
Sbjct: 580 MNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEI 639
Query: 357 PPNTIT-----------------------------------YNILIRSLCAIGDVARSLR 381
PN T YN LI +LC +G ++
Sbjct: 640 HPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAM 699
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
+ + M+A PD TFNAL+ + + + KA + M+ G+ P+ +Y+ +I+ L
Sbjct: 700 VMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLS 759
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+G E ++ M+ G PD +T N ++ + G +E+ I
Sbjct: 760 DAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTI 805
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/533 (24%), Positives = 232/533 (43%), Gaps = 46/533 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI +Y ++ L K+ + A F+ + D P+ TY L+ G+C+ G + A
Sbjct: 324 GIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSA 383
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ QM PNV TY+ +I+G+ + E ++ M+++NV PN T +++ G
Sbjct: 384 EFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDG 443
Query: 125 VFRCLDPHKAFELL--IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+F+ A E+ +R + E + + L+ L E +++ M +G
Sbjct: 444 LFKAGKQEVASEMSKEMRLIGVEE--NNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVT 501
Query: 183 PESSTFDYTVTCLVTGLD----------------------LNETCGILDTFIK------- 213
+ + + G D N L F K
Sbjct: 502 LDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKVGADWAY 561
Query: 214 -----RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD-RLVSNVNSYNMVIDCFCK 267
+G++P +T+ ++M + K G D EG L K + ++ N+V+ C+
Sbjct: 562 KGMREKGIEPDIATFNIMMNSQRKQG-DFEGILKLWDKMKSCGIKPSLMICNIVVGMLCE 620
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLI---SGHCKDAEVHKTRELLVMLLECGFKPD 324
M A +I +M +I PNL T+ + S H + + KT E LL G K
Sbjct: 621 KGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHE---TLLSYGIKLS 677
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
+ +N++I LC+ A + +M G P+T+T+N L+ V ++L +
Sbjct: 678 RQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYS 737
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
M ISP++ T+N +I+ I++ EK M + G+RPD+F+Y+ALI K G
Sbjct: 738 MMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIG 797
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
E+ + M +G P + T N+++ + G+ +A +++K +R +S
Sbjct: 798 NKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRRVS 850
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/512 (24%), Positives = 209/512 (40%), Gaps = 85/512 (16%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y A++D L K+ + A QM P+ TY+ +I+G + G+++EA+ L
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSL 421
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAK--------------------------------- 94
+++ME PN +TY +IDG A
Sbjct: 422 MRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKR 481
Query: 95 --RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
R+ EV +++ M + V + SL+ F+ D A E+E +
Sbjct: 482 IGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVS 541
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF--------------------DYTV 192
N L+ L A + M ++G P+ +TF D
Sbjct: 542 YNVLISGLLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMK 600
Query: 193 TC----------LVTGL-----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
+C +V G+ + E ILD + + P +TY + ++ K R
Sbjct: 601 SCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKR-- 658
Query: 238 EGDRYLNHVFK--DRLVS-----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
+ +FK + L+S + YN +I CK+ M +A + +M R P+
Sbjct: 659 -----ADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDT 713
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
VTFN L+ G+ + V K M++E G P+ T+N++I L A ++ LSE
Sbjct: 714 VTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSE 773
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M G+ P+ TYN LI IG+ S+ ++ +M AD + P T+N LI F ++ K
Sbjct: 774 MKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGK 833
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
+ +A + M + P+ +Y +I L K
Sbjct: 834 MLQATELMKEMGKRRVSPNTSTYCTMISGLCK 865
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/461 (19%), Positives = 193/461 (41%), Gaps = 54/461 (11%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLV-KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
PD +N LIH G+V + + LV +M G +P+V+ +LI C +V ++
Sbjct: 91 PDLCLWNSLIHQFNVNGLVHDQVSLVYSKMIACGVSPDVFALNVLIHSLC---KVGQLSF 147
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
+ +++ R + + T +++ G L
Sbjct: 148 AISLLRNRVISVDTVTYNTVISG-----------------------------------LC 172
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
+ +A EA L +M G LP++ +F+ + + ++D +
Sbjct: 173 EHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEI----SELNLI 228
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS----NVNSYNMVIDCFCKVNMMDRATEI 277
T+ +L+ + Y + ++D ++S +V +++ +I+ CK + +
Sbjct: 229 THTILISSYYNL-------HAIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLL 281
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
REM + + PN VT+ TL+ K + L ++ G D + ++ L +
Sbjct: 282 LREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFK 341
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
A +A ++E PN +TY L+ LC GD++ + + +M + P++ T
Sbjct: 342 AGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVT 401
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
++++I + + +E+A M + P+ F+Y +I L K+G+ + A + M
Sbjct: 402 YSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMR 461
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
G ++Y + ++ L + GR +E +VK +G++
Sbjct: 462 LIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTL 502
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 109/270 (40%), Gaps = 43/270 (15%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F+ I P+ Y +D K D + + + K R YN LI +C++G+
Sbjct: 636 FMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTR 695
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+A +++ ME G+ P+ T+ L+ G+ V + +M E + PN AT +++
Sbjct: 696 KAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTII 755
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G LS+ + E L +M RG
Sbjct: 756 RG-----------------------------------LSDAGLIKEVEKWLSEMKSRGMR 780
Query: 183 PESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
P+ D+T L++G + E+ I I G+ P+ STY +L+ K G+ ++
Sbjct: 781 PD----DFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQ 836
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ + K R+ N ++Y +I CK+
Sbjct: 837 ATELMKEMGKRRVSPNTSTYCTMISGLCKL 866
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/495 (25%), Positives = 222/495 (44%), Gaps = 10/495 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P YN ++D KS I A ++M V+ C P TYN LI R G+++E
Sbjct: 133 MGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEE 192
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV- 122
A+ L QM G +V+TYT ++ GF + RV E M+ PN T +L+
Sbjct: 193 AMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIK 252
Query: 123 -HGVFRCLDPHKAFELLIRFMEREP---LTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
HG + K E++ F E + + + NTLL N M SE + + ++M
Sbjct: 253 MHG-----NRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 307
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G++PE T++ ++ ++ + + G+ P STY ++ AL + G +
Sbjct: 308 VGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQ 367
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
++ L + N ++ ++ + + R + E+ I P+ V TL+
Sbjct: 368 SEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVL 427
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
+ K + + + L GF PD T N+MI R + L+ M E G P
Sbjct: 428 VNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTP 487
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ TYN L+ + RS + +++ A I PDI ++N +I ++CR ++++A F
Sbjct: 488 SLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIF 547
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M GL PD +Y+ + + F+EA M ++GC P+ T N +++ +
Sbjct: 548 SEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKL 607
Query: 479 GRFEEAHDIVKTSKE 493
R ++A + + E
Sbjct: 608 NRRDDAIKFISSLHE 622
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 130/557 (23%), Positives = 234/557 (42%), Gaps = 75/557 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV-VDE 63
G P Y ++I A V + A + F++M + CKP TYN++++ ++G+ ++
Sbjct: 28 GFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNK 87
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L + M+ G P+ YTY LI E V E MK P++ T +L+
Sbjct: 88 ITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLD 147
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ +A E+L R ME + +V N+L+ + + + EA + +M +RG
Sbjct: 148 VYGKSRRIKEAIEVL-REMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIK 206
Query: 183 PESSTFDYTVTCLV-TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+ T+ ++ V TG D + + G KP T+ L++ G+ E +
Sbjct: 207 LDVFTYTAMLSGFVRTGKD-ESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMK 265
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ V ++ ++N ++ F + M + + +EM+ P T+NTLIS +
Sbjct: 266 VFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYS 325
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ + + +L+ G PD T+N+++ L R +E + L+EM + PN +
Sbjct: 326 RCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNEL 385
Query: 362 TYNILIRSLCAIGDVARSLRLFQK--------------------------MQADR----- 390
T+ L+ + ++ R L L ++ ++A+R
Sbjct: 386 THCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLEL 445
Query: 391 ----ISPDIYTFNALI------QSFCRMNKI----------------------------- 411
SPD+ T NA+I Q + N+I
Sbjct: 446 KRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENF 505
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
E++E+ +L G++PD SY+ +I A ++GR EA F M ++G PD T N
Sbjct: 506 ERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTF 565
Query: 472 LETLVQQGRFEEAHDIV 488
+ + FEEA D+V
Sbjct: 566 VASYAADSMFEEAIDVV 582
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/517 (21%), Positives = 217/517 (41%), Gaps = 36/517 (6%)
Query: 16 VIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLG 75
+I+ L K + +A + D +PD + Y LI G EA+ + K+ME G
Sbjct: 4 IINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63
Query: 76 YAPNVYTYTILIDGFCN-AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
P + TY ++++ + ++ + E MK + P+E T +L+ R +A
Sbjct: 64 CKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEA 123
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
+ + K+ NTLL + EA +LR+M G P T++ ++
Sbjct: 124 AAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISA 183
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD------------------ 236
L E + + ++RG+K TY ++ + G+D
Sbjct: 184 YARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPN 243
Query: 237 ---------VEGDR----YLNHVFKDR----LVSNVNSYNMVIDCFCKVNMMDRATEICR 279
+ G+R + VF++ V ++ ++N ++ F + M + + +
Sbjct: 244 ICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFK 303
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
EM+ P T+NTLIS + + + + +L+ G PD T+N+++ L R
Sbjct: 304 EMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGG 363
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+E + L+EM + PN +T+ L+ + ++ R L L +++ + I P
Sbjct: 364 LWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLK 423
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
L+ + + + +AE+AF + G PD + +A+I + + + M+++
Sbjct: 424 TLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKES 483
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G P T N ++ Q FE + +++K +GI
Sbjct: 484 GFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGI 520
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 199/484 (41%), Gaps = 36/484 (7%)
Query: 50 ILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER 109
++I+ + + G V A L+ + G+ P+VY YT LI + R E V + M+E
Sbjct: 3 VIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 110 NVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREP-LTQKLVCNTLLYRLSNNSMASE 168
P T +++ + P L M+ L + NTL+ S+ E
Sbjct: 63 GCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEE 122
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
AAA+ M G++P+ T++ + + E +L G P TY L+
Sbjct: 123 AAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLIS 182
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
A + G E N + + + +V +Y ++ F + + A + EMR P
Sbjct: 183 AYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKP 242
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
N+ TFN LI H + + ++ + C PD T+N+++ + +
Sbjct: 243 NICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVF 302
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
EM G P TYN LI + G +++ ++++M I+PD+ T+NA++ + R
Sbjct: 303 KEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARG 362
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL---------------IKSGRFD------ 447
E++EK M +P+ ++ +L+ A I SG +
Sbjct: 363 GLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLL 422
Query: 448 --------------EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
EA++ FL +++ G +PD T N ++ ++ + ++I+ KE
Sbjct: 423 KTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKE 482
Query: 494 RGIS 497
G +
Sbjct: 483 SGFT 486
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 98/201 (48%), Gaps = 1/201 (0%)
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K+ +V LL L + GF+PD + + S+I R+ +A+ +M E G P I
Sbjct: 10 KEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLI 69
Query: 362 TYNILIRSLCAIGDVARSLR-LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
TYN+++ +G + LF+ M+ I PD YT+N LI R + E+A F
Sbjct: 70 TYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFED 129
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M ++G PD +Y+ L+ KS R EA + ME NGC+P T N ++ + G
Sbjct: 130 MKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGL 189
Query: 481 FEEAHDIVKTSKERGISFKSF 501
EEA ++ ERGI F
Sbjct: 190 LEEAMELKNQMVERGIKLDVF 210
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 133/321 (41%), Gaps = 43/321 (13%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P YN +I A + S D A +++M PD TYN ++ + R G+ ++
Sbjct: 308 VGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQ 367
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ +++ +M+ PN T+ L+ + N K + + + E + + P+ +++LV
Sbjct: 368 SEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVL 427
Query: 124 GVFRC---LDPHKAFELLIRFMEREPLTQKL-VCNTLLYRLSNNSMASEAAAILRKMGDR 179
+C L+ +AF L +R+ + L N ++ M ++ IL M +
Sbjct: 428 VNSKCDLLLEAERAFLEL----KRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKES 483
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G+ P +T++ + + + +L + +G+KP +Y ++ A + GR E
Sbjct: 484 GFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEA 543
Query: 240 DRYLNHVFKDRLVSNV-----------------------------------NSYNMVIDC 264
+ + + L+ +V N+YN VID
Sbjct: 544 SHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDG 603
Query: 265 FCKVNMMDRATEICREMRDRD 285
+CK+N D A + + + D
Sbjct: 604 YCKLNRRDDAIKFISSLHELD 624
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 15/155 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +PS YN+++ +S + + + +++ KPD +YN +I CR G + EA
Sbjct: 484 GFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEA 543
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G P+V TY + + E V+ M + PN+ T S++ G
Sbjct: 544 SHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDG 603
Query: 125 VFRC---------------LDPHKAFELLIRFMER 144
+ LDPH + E R +ER
Sbjct: 604 YCKLNRRDDAIKFISSLHELDPHISREDECRLLER 638
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/478 (26%), Positives = 214/478 (44%), Gaps = 22/478 (4%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
RLY A V S+ +A+ + M + G + EA +V +
Sbjct: 92 RLYVTAATAFVARGSLPMAHEVMRGM---------------VAAFGEAGRLPEAADMVLE 136
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M G V T ++ +V + M VCP+E + R+LV C
Sbjct: 137 MRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALV---VVCCR 193
Query: 131 PHKAFEL--LIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
K E+ L+ M R + C ++ L + + R+M + G P
Sbjct: 194 EGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVN 253
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR-YLNHV 246
+ + L + + +L+ + RG+KP T+ L++ L K G R +L +
Sbjct: 254 YTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLI 313
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
NV++Y ++I +C+ + RA + M ++ + PN T+ TLI GHCK
Sbjct: 314 KSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSF 373
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ EL+ + + GF P+ +T+N++ID C+ + ++A L G+ + ITY IL
Sbjct: 374 DRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTIL 433
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I C G + +L LF +M + PDI + +LI ++C+ ++E+++K F L +GL
Sbjct: 434 ITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGL 493
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
P +Y+++I K GR A + F M QNGC DS T ++ L ++ R EEA
Sbjct: 494 LPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEA 551
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 180/448 (40%), Gaps = 44/448 (9%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N V+ +++ S A F M+ PD ++ L+ CR G V+E L+ M
Sbjct: 150 NWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWR 209
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G++ + T T+++ C R +V M E PN + + G
Sbjct: 210 YGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDG--------- 260
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
L +A +L +M RG P YT T
Sbjct: 261 --------------------------LCKRRYVKQAFHVLEEMVGRGLKPNV----YTHT 290
Query: 194 CLVTGL-DLNETCGILDTFIK----RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
L+ GL + T F+K KP TY +++ + G+ + L + +
Sbjct: 291 TLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVE 350
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
L N N+Y +I CK DRA E+ +M+ PN+ T+N +I G CK ++ +
Sbjct: 351 QGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQE 410
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
++L M G K DK T+ +I C+ ALD MVE G P+ Y LI
Sbjct: 411 AYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIS 470
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
+ C + S + F K + P T+ ++I +C++ + A + F M+ G
Sbjct: 471 TYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFA 530
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSM 456
D+ +Y ALI L K R +EAK + M
Sbjct: 531 DSITYGALISGLCKESRLEEAKALYEGM 558
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 177/424 (41%), Gaps = 34/424 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P R + A++ + ++ M D T +++ +C G +
Sbjct: 176 GVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDV 235
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++M G PNV YT IDG C + V + F VLE M R + PN T +L+ G
Sbjct: 236 SEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDG 295
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF L ++ ++ Y P
Sbjct: 296 LCKIGWTERAFRLFLKLIK----------------------------------SSSYKPN 321
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L +L +++G+KP +TY L+ K G +N
Sbjct: 322 VHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMN 381
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ + N+ +YN VID FCK + A ++ R + + + +T+ LI+ HCK
Sbjct: 382 KMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQG 441
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +L ++E G PD + S+I C+ + E++ + + G+ P TY
Sbjct: 442 HITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYT 501
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I C +G +LR+F++M + D T+ ALI C+ +++E+A+ + ML
Sbjct: 502 SMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDK 561
Query: 425 GLRP 428
L P
Sbjct: 562 RLVP 565
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/309 (19%), Positives = 120/309 (38%), Gaps = 71/309 (22%)
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
++ F + + A ++ EMR + + T N ++ + R++ + G
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD----- 375
PD+ +F +++ CR + E+ L+ M +G + T +++RSLC G
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 236
Query: 376 ------------------------------VARSLRLFQKMQADRISPDIYTFNALIQSF 405
V ++ + ++M + P++YT LI
Sbjct: 237 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 296
Query: 406 CRMNKIEKAEKAFFS------------------------------------MLTLGLRPD 429
C++ E+A + F M+ GL+P+
Sbjct: 297 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 356
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y+ LI K G FD A + M+Q G P+ YT N +++ ++G+ +EA+ +++
Sbjct: 357 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 416
Query: 490 TSKERGISF 498
+ +G+ F
Sbjct: 417 MATSQGLKF 425
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ + Y ++I K LA F++M + C D TY LI G+C+ ++E
Sbjct: 491 IGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEE 550
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
A L + M P T L +C ++ + VL+ + +R
Sbjct: 551 AKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQ 597
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 210/442 (47%), Gaps = 42/442 (9%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS N ++ ALV + +DLA F+ + PD FT+NI+I G+C+ G + +A +
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV---LEIMKERNVCPNEATVRSLVHG 124
K + G AP+V TY +IDG+C R ++ V L+ M E + PNE T LV+G
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267
Query: 125 VFRCLDPHKAFELLI-RFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
C D + A + + M+++ + +V + L++ L + E ++ +M D G +
Sbjct: 268 Y--CKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLV 325
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P +T + +L+ F K+G+ D EG +
Sbjct: 326 PNLATLN----------------SVLNGFCKKGMM-----------------TDAEG--W 350
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
++ + + + NV +Y +++D + +++ M A + M + + PN +N LI+G +
Sbjct: 351 IDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTR 410
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + LL + G + D T+N +I LC A+ L EM+ G+ P +T
Sbjct: 411 NGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLT 470
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN +I C G++ + + +M+ + ++ T+N I+ CRM K+E+ + ML
Sbjct: 471 YNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEML 530
Query: 423 TLGLRPDNFSYSALIKALIKSG 444
GL P+ +Y + + +++ G
Sbjct: 531 EKGLVPNGVTYDTIKEGMMEKG 552
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 165/341 (48%), Gaps = 17/341 (4%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAY---LKFQQMSVDQCKPDRFTYNILIHGICR 57
I G++PS YN +ID K Y ++M P+ T+N+L++G C+
Sbjct: 211 IRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCK 270
Query: 58 IGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
A+R+ ++M+ G A +V TY+ L+ G C+ +V E ++++ MK+ + PN AT
Sbjct: 271 DSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLAT 330
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL---YRLSNNSMASEAAAILR 174
+ S+++G + A E I ME++ + +V T+L YR + +A A+
Sbjct: 331 LNSVLNGFCKKGMMTDA-EGWIDSMEQKNVKPNVVTYTILVDGYRRLDK--MKDALAVKE 387
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
M +G P + ++ CL+ G D G+LD +GV+ TY +L+ AL
Sbjct: 388 AMSGKGVRPNARIYN----CLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGAL 443
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
G + + L+ + L +YN +I+ +C+ + A EI M N+
Sbjct: 444 CVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANV 503
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
VT+N I C+ ++ +T ELL +LE G P+ T++++
Sbjct: 504 VTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTI 544
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 122/243 (50%), Gaps = 3/243 (1%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
S N ++ +D A + R ++P+L TFN +ISG CK ++ K ++ +
Sbjct: 152 SVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDI 211
Query: 317 LECGFKPDKFTFNSMIDCLC---RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
G P T+N++ID C RA R L EMVE G+ PN +T+N+L+ C
Sbjct: 212 RAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKD 271
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
+ A ++R+F++M+ I+ + T++AL+ C K+E+ K M LGL P+ +
Sbjct: 272 SNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATL 331
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
++++ K G +A+ SMEQ P+ T ++++ + + ++A + +
Sbjct: 332 NSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSG 391
Query: 494 RGI 496
+G+
Sbjct: 392 KGV 394
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 134/291 (46%)
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
+L ++ G+ P T+ +L+ K R + + + ++V +Y+ ++
Sbjct: 244 ALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGL 303
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C ++ ++ EM+D + PNL T N++++G CK + + + + KP+
Sbjct: 304 CSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNV 363
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T+ ++D R + +DAL M GV PN YN LI GD L +
Sbjct: 364 VTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDE 423
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M+ + DI T+N LI + C ++ KA K ML +GL P + +Y+ +I + G
Sbjct: 424 MRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGN 483
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
A + ME+ + T N+ ++ L + G+ EE ++++ E+G+
Sbjct: 484 IKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGL 534
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 102/240 (42%), Gaps = 6/240 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ N+V++ K + A M KP+ TY IL+ G R+ + +
Sbjct: 322 LGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKD 381
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL + + M G G PN Y LI GF V +L+ M+ + V + T L+
Sbjct: 382 ALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIG 441
Query: 124 GVFRCLDPHKAFELL--IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ + KA +LL + + EP+ L NT++ A I +M
Sbjct: 442 ALCVKGEVRKAVKLLDEMLMVGLEPV--HLTYNTIINGYCEKGNIKSAYEIRTRMEKGKK 499
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG--RDVEG 239
T++ + CL + ET +L+ +++G+ P TY + E + + G DV G
Sbjct: 500 RANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYTPDVRG 559
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 3/143 (2%)
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P+ + N L+ +L A V + R F+ R+SPD++TFN +I C+ ++ KA
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207
Query: 418 FFSMLTLGLRPDNFSYSALIKALIK---SGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
+ GL P +Y+ +I K +GR M + G +P+ T N+++
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267
Query: 475 LVQQGRFEEAHDIVKTSKERGIS 497
+ A + + K++GI+
Sbjct: 268 YCKDSNTAAAVRVFEEMKQQGIA 290
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
R P ++ N L+ + +++ AE+AF + L + PD F+++ +I L K+G+ +A
Sbjct: 145 RHRPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKA 204
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI---VKTSKERGIS 497
+ G P T N I++ ++GR + + +K E GIS
Sbjct: 205 GDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGIS 255
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 203/455 (44%), Gaps = 38/455 (8%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
C PD YN ++ G C G VD A R + + YT LI G C R A
Sbjct: 124 CGPDVMAYNAMMAGYCGAGQVDAARRWCAER---AVERDAYTCDTLIRGLCGRGRTANAL 180
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
VL+ M R P+ T L+ C Y+
Sbjct: 181 AVLDEMLRRRCVPDVVTYTILLEAT---------------------------CKRSGYK- 212
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
+A +L +M D+G P+ T++ V + +++ L G +P
Sbjct: 213 -------QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 265
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
+Y ++++ L A R + + + + + NV ++NM+I C+ +++ A E+ +
Sbjct: 266 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 325
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
+ +PN +++N L+ CK ++ K L +++ G PD ++N+++ LCR+
Sbjct: 326 IPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 385
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
+ A++ L ++ + G P I+YN +I L G +L L +M + + PDI T++
Sbjct: 386 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 445
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
+ CR ++IE A +AF + +G+RP+ Y+A+I L K A F M NG
Sbjct: 446 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 505
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
C P+ T +++E L +G +EA D++ RG
Sbjct: 506 CMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 178/347 (51%), Gaps = 14/347 (4%)
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT--CLVTGLDL-NETCGILD 209
C L+ +LS + +EA +L G P+ ++ + C +D C
Sbjct: 101 CAALIKKLSASGRTAEARRVLAACG-----PDVMAYNAMMAGYCGAGQVDAARRWCA--- 152
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+R V+ T L+ L GR L+ + + R V +V +Y ++++ CK +
Sbjct: 153 ---ERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRS 209
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+A ++ EMRD+ P++VT+N +++G C++ V E L L G +P+ ++N
Sbjct: 210 GYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYN 269
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++ LC A R+EDA + + EM + G PPN +T+N+LI LC G V +L + +++
Sbjct: 270 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY 329
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
SP+ ++N L+ +FC+ K++KA M++ G PD SY+ L+ AL +SG D A
Sbjct: 330 GCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 389
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ ++ GC P + N +++ L + G+ +EA +++ +G+
Sbjct: 390 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGL 436
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 181/402 (45%), Gaps = 40/402 (9%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P Y +++A K + A +M C PD TYN++++GIC+ G VD+A+
Sbjct: 193 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 252
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+K + G PN +Y I++ G C A+R + ++ M ++ PN T
Sbjct: 253 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT---------- 302
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
F +LI F+ R+ L + A +L ++ G P S +
Sbjct: 303 -------FNMLISFLCRKGLVEP------------------ALEVLEQIPKYGCSPNSLS 337
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + +++ LD + RG P +Y L+ AL ++G +V+ L H
Sbjct: 338 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSG-EVDVAVELLHQL 396
Query: 248 KDRLVSNV-NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
KD+ + V SYN VID K A E+ EM + + P+++T++T+ +G C++ +
Sbjct: 397 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 456
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ + G +P+ +N++I LC+ A+D + M+ G PN TY IL
Sbjct: 457 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 516
Query: 367 IRSLCAIGDVARSLRLFQKM--QADRISPDIYTFN-ALIQSF 405
I L G + + L ++ + + I D++ + A + +F
Sbjct: 517 IEGLAYEGLIKEARDLLDELCSRGEEILLDVHLIDVAFLTTF 558
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 172/393 (43%), Gaps = 35/393 (8%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
+M +C PD TY IL+ C+ +A++L+ +M G P++ TY ++++G C
Sbjct: 183 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 242
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
RV + L+ + PN +
Sbjct: 243 EGRVDDAIEFLKNLPSYGCEPNTVSY---------------------------------- 268
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
N +L L +A ++ +MG +G P TF+ ++ L + +L+
Sbjct: 269 -NIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP 327
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
K G P +Y L+ A K + + +L+ + ++ SYN ++ C+ +D
Sbjct: 328 KYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVD 387
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A E+ +++D+ AP L+++NT+I G K + + ELL ++ G +PD T++++
Sbjct: 388 VAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIA 447
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
LCR R EDA+ ++ + G+ PNT+ YN +I LC + ++ LF M +
Sbjct: 448 AGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM 507
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
P+ T+ LI+ I++A + + G
Sbjct: 508 PNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 114/215 (53%), Gaps = 3/215 (1%)
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P+++ +N +++G+C +V R E + D +T +++I LC R +AL
Sbjct: 125 GPDVMAYNAMMAGYCGAGQVDAARRWCA---ERAVERDAYTCDTLIRGLCGRGRTANALA 181
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L EM+ P+ +TY IL+ + C ++++L +M+ +PDI T+N ++ C
Sbjct: 182 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 241
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ +++ A + ++ + G P+ SY+ ++K L + R+++A++ M Q GC P+
Sbjct: 242 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 301
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
T N+++ L ++G E A ++++ + G S S
Sbjct: 302 TFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSL 336
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 144/351 (41%), Gaps = 35/351 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P YN V++ + + +D A + + C+P+ +YNI++ G+C ++A
Sbjct: 225 GCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDA 284
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M G PNV T+ +LI C V VLE + + PN + L+H
Sbjct: 285 EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHA 344
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KA L + R + NTLL L + A +L ++ D+G P
Sbjct: 345 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 404
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+++ + L E +L+ + +G++P TY + L +
Sbjct: 405 LISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR------------ 452
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+DR+ + ++ V +D I PN V +N +I G CK
Sbjct: 453 ---EDRIEDAIRAFGKV--------------------QDMGIRPNTVLYNAIILGLCKRR 489
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
E H +L ++ G P++ T+ +I+ L ++A D L E+ G
Sbjct: 490 ETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP++ YN ++ A K +D A M C PD +YN L+ +CR G VD A
Sbjct: 330 GCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 389
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ Q++ G AP + +Y +IDG A + E +L M + + P+ T ++ G
Sbjct: 390 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 449
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R A + + ++ N ++ L A + M G +P
Sbjct: 450 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 509
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLL 225
ST+ + L + E +LD RG + +L+
Sbjct: 510 ESTYTILIEGLAYEGLIKEARDLLDELCSRGEEILLDVHLI 550
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI P+T LYNA+I L K A F M + C P+ TY ILI G+ G++ E
Sbjct: 469 MGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKE 528
Query: 64 ALRLVKQM 71
A L+ ++
Sbjct: 529 ARDLLDEL 536
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 213/493 (43%), Gaps = 72/493 (14%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQC-KPDRFTYNILIHGICRIGVVDE 63
G P+ +N +I L I A L F V Q D+ +Y LI+G+C++G +
Sbjct: 135 GFDPNAITFNTLIKGLCLKGHIHQA-LNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITA 193
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL+L+K+++G PN Y ++ID C AK V + F + M + + P++ T
Sbjct: 194 ALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFT------ 247
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
CN+L+Y EA +L KM P
Sbjct: 248 -----------------------------CNSLIYGFCIMGQLKEAVGLLHKMILENINP 278
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
TF V + E +L +K+ + TY LM+ +
Sbjct: 279 RMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIF 338
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +++NV SY +I+ CK+ M+D A + EMR R I PN+VT+N+LI G K
Sbjct: 339 DSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKL 398
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ +L+ + + G P+ T+NS++D LC+ H + A+ L+ + + G+ P+ TY
Sbjct: 399 GKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTY 458
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+LI+ LC G + + ++F+ + + D+YT+ +IQ FC
Sbjct: 459 TVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCV---------------- 502
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G FD A ME NGC P++ T +++ +L ++ +
Sbjct: 503 -------------------KGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDM 543
Query: 484 AHDIVKTSKERGI 496
A +++ RG+
Sbjct: 544 AEKLLREMIARGL 556
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/493 (22%), Positives = 230/493 (46%), Gaps = 43/493 (8%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P +N ++ +LVK+ A QQM ++ D FT+NILI+ ++G+ +
Sbjct: 67 TPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFS 126
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+ ++ G+ PN T+ LI G C + + + + + ++ + +L++G+
Sbjct: 127 VFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLC 186
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A +LL R + ++ N ++ + + ++A + +M + P+
Sbjct: 187 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPD-- 244
Query: 187 TFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
D+T L+ G L E G+L I + PR T+ +L
Sbjct: 245 --DFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSIL---------------- 286
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+D FCK + A + +DI ++VT+N+L+ G+C
Sbjct: 287 -------------------VDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCL 327
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
E++K +++ + G + ++ +MI+ LC+ ++A++ EM + PN +T
Sbjct: 328 VKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVT 387
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN LI L +G ++ L+L +M P+I T+N+++ + C+ + ++KA ++
Sbjct: 388 YNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLK 447
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G+RPD ++Y+ LIK L +SG+ ++A++ F + G N D YT ++++ +G F+
Sbjct: 448 DQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFD 507
Query: 483 EAHDIVKTSKERG 495
A ++ ++ G
Sbjct: 508 AALALLSKMEDNG 520
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 82/202 (40%)
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
H +D E + +L P FN ++ L +A AL +M G+ +
Sbjct: 45 HHQDEENNLISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSD 104
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
T+NILI +G + S +F K+ P+ TFN LI+ C I +A
Sbjct: 105 FFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHD 164
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
++ G D SY LI L K GR A Q ++ P++ N+I++ + +
Sbjct: 165 KVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAK 224
Query: 480 RFEEAHDIVKTSKERGISFKSF 501
+A D+ + IS F
Sbjct: 225 LVNDAFDLYSQMVAKRISPDDF 246
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/494 (22%), Positives = 221/494 (44%), Gaps = 35/494 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ PS + L++ + F+ + +P ++T++ +I G CR G +
Sbjct: 225 VGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHL 284
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L+ M PN + Y I+I+ C R ++ +M ER P T
Sbjct: 285 GESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTF----- 339
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
NT++ EA + + + G+ P
Sbjct: 340 ------------------------------NTVINAFCKEGNVVEARKLFDGLKEMGFSP 369
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + V ++++ + + K+G+ P T+ +L+ YK GR+ +GDR L
Sbjct: 370 NAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLL 429
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ L+ + + +++ + C +D A E +M ++ ++P+++ FN++I+ + +
Sbjct: 430 KDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQA 489
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
K E +++ G P T +S++ L R ++A + + +M+E G+ N + +
Sbjct: 490 GLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAF 549
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+L+ GDV + L+ +M+ I PD+ F+A I + +E+A F ML
Sbjct: 550 TVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLR 609
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL P+NF+Y++LI K G+ +EA + M G PD +T+N+I+ L +QGR
Sbjct: 610 KGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRS 669
Query: 484 AHDIVKTSKERGIS 497
A ++ + G+S
Sbjct: 670 AINVFMDMHQTGLS 683
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 225/481 (46%), Gaps = 46/481 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G SP+ +YN +++ VK ID A + +++M PD T+NIL+ G + G ++
Sbjct: 365 MGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREED 424
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
RL+K + LG P+ + I + G C A R+ E L M E+ + P+ S++
Sbjct: 425 GDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIA 484
Query: 124 GVFRCLDPHKAFE---LLIRF-MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+ KAFE L++ F + P T C++LL LS N EA ++ +M ++
Sbjct: 485 AYSQAGLEDKAFEAYKLMVHFGLTPSPST----CSSLLMGLSINGRLQEATELIGQMIEK 540
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G + F TV +LD F KRG DV G
Sbjct: 541 GLSVNNMAF--TV--------------LLDKFFKRG--------------------DVVG 564
Query: 240 DRYLNHVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ L + R + +V +++ ID K +++ A + EM + + PN +N+LI
Sbjct: 565 AQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLIC 624
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G CK ++++ +L ++ G PD FT N +I LC+ R A++ +M + G+ P
Sbjct: 625 GFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSP 684
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ ITYN LI C D+ + L +M A +PD+ T+N I FC ++ +A
Sbjct: 685 DIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLML 744
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+++ G+ P+ +Y++++ + S D A + + P+ T+NL+L +Q
Sbjct: 745 DELVSAGIVPNTVTYNSMLNG-VCSDILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQ 803
Query: 479 G 479
G
Sbjct: 804 G 804
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 204/483 (42%), Gaps = 6/483 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P ++ +I + I L M C+P+ F YNI+I+ C G +A
Sbjct: 261 GPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDA 320
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L M G P V T+ +I+ FC V E ++ + +KE PN +L++G
Sbjct: 321 LAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNG 380
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A L ++ + N L+ + +L+ + G LP+
Sbjct: 381 YVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPD 440
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG---RDVEGDR 241
S FD +V+ L L+E L +++G+ P + ++ A +AG + E +
Sbjct: 441 RSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYK 500
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ H S +S M + + + ATE+ +M ++ ++ N + F L+
Sbjct: 501 LMVHFGLTPSPSTCSSLLMGLSINGR---LQEATELIGQMIEKGLSVNNMAFTVLLDKFF 557
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K +V + L + G PD F++ ID L + E+A + EM+ G+ PN
Sbjct: 558 KRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNF 617
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
YN LI C G + +L+L + M+ + PDI+T N +I C+ ++ A F M
Sbjct: 618 AYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDM 677
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
GL PD +Y+ LI K+ A M +G NPD T N+ + R
Sbjct: 678 HQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRM 737
Query: 482 EEA 484
A
Sbjct: 738 NRA 740
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 204/455 (44%), Gaps = 15/455 (3%)
Query: 55 ICRIGVVDEALRLVKQMEGLGYAPNVYTYTI-----LIDGFCNAKRVAEVFRVLEIMKER 109
I RIGV LR +E + +VY L+ F NA+ + +L M+E
Sbjct: 170 IARIGV----LRSGDLVEFMWRGHHVYESDFSVLDSLMRAFVNAEMGFQALEILGRMREV 225
Query: 110 NVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEA 169
V P+ + V L + R D ++L + R P K + ++
Sbjct: 226 GVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLG 285
Query: 170 AAILRKMGDRGYLPESSTFDYTV---TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
++L M + E + F Y + C + G ++ + I+RG P T+ +
Sbjct: 286 ESLLHLMPK--FHCEPNAFAYNIVINACCIRG-RTSDALAWFNLMIERGCNPTVVTFNTV 342
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ A K G VE + + + + N YN +++ + K+ +D+A + EMR + I
Sbjct: 343 INAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGI 402
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
AP+ +TFN L+SGH K LL + G PD+ F+ + LC A R ++A++
Sbjct: 403 APDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAME 462
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L +M+E G+ P+ I +N +I + G ++ ++ M ++P T ++L+
Sbjct: 463 FLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLS 522
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
++++A + M+ GL +N +++ L+ K G A+ + ME+ G PD
Sbjct: 523 INGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVV 582
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ ++ L +QG EEA+++ +G+ +F
Sbjct: 583 AFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNF 617
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 146/374 (39%), Gaps = 37/374 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SPS +N+VI A ++ D A+ ++ M P T + L+ G+ G + EA
Sbjct: 471 GLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEA 530
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ QM G + N +T+L+D F V + M+ R + P+ + + G
Sbjct: 531 TELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDG 590
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A+ + + + + + N+L+ +EA + + M RG LP+
Sbjct: 591 LSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPD 650
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T + + L + + + G+ P TY L+ KA V D +N
Sbjct: 651 IFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVN 710
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT-----------------------EICREM 281
++ ++ +YN+ I FC M+RA +C ++
Sbjct: 711 RMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSDI 770
Query: 282 RDRDI-----------APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
DR + PN+VT N L+S K +T L E + D+ T+
Sbjct: 771 LDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPERTLMWGHKLSEIPYAFDEITYKI 830
Query: 331 MIDCLCRAHRFEDA 344
M H EDA
Sbjct: 831 MDKA---HHILEDA 841
>gi|296081018|emb|CBI18522.3| unnamed protein product [Vitis vinifera]
Length = 808
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 139/549 (25%), Positives = 240/549 (43%), Gaps = 72/549 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P T Y +ID + ++ A ++M D KP+ TY ++ G C+ G +DEA
Sbjct: 188 GIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEA 247
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L K +E LG + + Y LIDGFC + VF +LE M++R + P+ T S+++G
Sbjct: 248 YTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIING 307
Query: 125 VFRCLDPHKAFE--------------LLIRFMEREPLTQKL----------------VCN 154
+ + +A E LL ++E E + L +CN
Sbjct: 308 LCKAGRTSEADEVSKGIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDGVCIDLVMCN 367
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
T++ L +A A + M + +S T+ + + E I D F K
Sbjct: 368 TIIKALLMVGALEDAYAFYKGMSGMDLVADSVTYCTMINGYCRVSRIEEALEIFDEFRKT 427
Query: 215 GVKPRFSTYLL-----------------------------LMEALYKAGRDVEGDRYLNH 245
+ S YL ++++L K GR ++ + +
Sbjct: 428 SIS---SCYLFFVQEGFFPGCMRSIHENEKETITVAFPVSVLKSLKKNGRILDAYKLVIG 484
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
++ V ++ Y+++ID CK +D+A ++C ++ + IA N+ +N++I+G C+
Sbjct: 485 AEENLPVMDLVDYSIMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGC 544
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + L L + P + T+ ++ID LC+ DA +MV G PN YN
Sbjct: 545 LVQAFRLFDSLEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNS 604
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI C G++ +L L ++A I PD +T +ALI +C +E A FF
Sbjct: 605 LIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKD 664
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ--------NGCNPDSYTSNL--ILETL 475
+ PD + L++ L GR +EA+ M Q N + + T ++ + +L
Sbjct: 665 ILPDFLGFMYLVRGLCAKGRMEEARGILREMLQTRSVLELINRVDTEIETESVESFIISL 724
Query: 476 VQQGRFEEA 484
+QG +EA
Sbjct: 725 CEQGSIQEA 733
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 129/552 (23%), Positives = 221/552 (40%), Gaps = 91/552 (16%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ A++ AL + + M ++ D Y+ I G R GV+ EA+
Sbjct: 119 LRPNIATCTALLGALFQLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAI 178
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
R K+M G AP+ +YTILIDGF V + LE MK+ + PN T +++ G
Sbjct: 179 RKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLG- 237
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
F ++ L EA + + + + G +
Sbjct: 238 ---------------FCKKGKL-------------------DEAYTLFKMVENLGIEVDE 263
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+ + T D++ G+L+ KRG+ P TY ++ L KAGR E D
Sbjct: 264 FMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEADEVSKG 323
Query: 246 VFKDRLV-----------SNVNSY-------------------NMVIDCFCKVNMMDRAT 275
+ D + NV N +I V ++ A
Sbjct: 324 IAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDGVCIDLVMCNTIIKALLMVGALEDAY 383
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL------------VMLLECGFKP 323
+ M D+ + VT+ T+I+G+C+ + + + E+ + ++ GF P
Sbjct: 384 AFYKGMSGMDLVADSVTYCTMINGYCRVSRIEEALEIFDEFRKTSISSCYLFFVQEGFFP 443
Query: 324 ---------DKFTFN-----SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+K T S++ L + R DA + E + + Y+I+I
Sbjct: 444 GCMRSIHENEKETITVAFPVSVLKSLKKNGRILDAYKLVIGAEENLPVMDLVDYSIMIDV 503
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
LC G + ++L L ++ I+ +IY +N++I CR + +A + F S+ + L P
Sbjct: 504 LCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVPS 563
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y+ LI +L K G +AKQ F M G NP+ N +++ + G EEA +++
Sbjct: 564 EITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEALNLLI 623
Query: 490 TSKERGISFKSF 501
K R I F
Sbjct: 624 DLKARCIKPDEF 635
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 110/494 (22%), Positives = 216/494 (43%), Gaps = 46/494 (9%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQM--EGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
P FT++ LIH G + A+ +++ M + + Y + + +I GFC +
Sbjct: 48 PSSFTFHSLIHSFTSQGKMSRAIEVLELMTHDKVRYPFGNFVSSSVISGFCKISKPQLAV 107
Query: 101 RVLE-IMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV-CNTLLY 158
E + R + PN AT +L+ +F+ L + L+ +MERE +V ++ +
Sbjct: 108 GFFENAVNSRVLRPNIATCTALLGALFQ-LGRVREVSDLVSWMEREEFVFDVVFYSSWIC 166
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLD----LNETCGILDTFIKR 214
+ EA ++M ++G P++ ++ T L+ G + + G L+ K
Sbjct: 167 GYFREGVLVEAIRKHKEMIEKGIAPDTVSY----TILIDGFSREGYVEKAIGFLEKMKKD 222
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G+KP TY +M K G+ E V + + Y +ID FC +D
Sbjct: 223 GLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCV 282
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ +M R I+P++VT+N++I+G CK + E + G D TF++++
Sbjct: 283 FGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEADE-----VSKGIAGDAVTFSTLLHG 337
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
+ L+ + E GV + + N +I++L +G + + ++ M + D
Sbjct: 338 YIEEENVKGILETKRRLEEDGVCIDLVMCNTIIKALLMVGALEDAYAFYKGMSGMDLVAD 397
Query: 395 IYTFNALIQSFCRMNKIEKA--------------------EKAFFSMLTLGLRPDN---- 430
T+ +I +CR+++IE+A ++ FF + +
Sbjct: 398 SVTYCTMINGYCRVSRIEEALEIFDEFRKTSISSCYLFFVQEGFFPGCMRSIHENEKETI 457
Query: 431 ---FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
F S L K+L K+GR +A + + E+N D +++++ L ++G ++A D+
Sbjct: 458 TVAFPVSVL-KSLKKNGRILDAYKLVIGAEENLPVMDLVDYSIMIDVLCKEGHLDKALDL 516
Query: 488 VKTSKERGISFKSF 501
K++GI+ +
Sbjct: 517 CAFVKKKGIALNIY 530
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 130/296 (43%), Gaps = 3/296 (1%)
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY--NMVIDCFC 266
D G+ P T+ L+ + G+ L + D++ ++ + VI FC
Sbjct: 39 DCLTNLGILPSSFTFHSLIHSFTSQGKMSRAIEVLELMTHDKVRYPFGNFVSSSVISGFC 98
Query: 267 KVNMMDRATEICRE-MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
K++ A + R + PN+ T L+ + V + +L+ + F D
Sbjct: 99 KISKPQLAVGFFENAVNSRVLRPNIATCTALLGALFQLGRVREVSDLVSWMEREEFVFDV 158
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
++S I R +A+ EM+E G+ P+T++Y ILI G V +++ +K
Sbjct: 159 VFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEK 218
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M+ D + P++ T+ A++ FC+ K+++A F + LG+ D F Y LI G
Sbjct: 219 MKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGD 278
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
D ME+ G +P T N I+ L + GR EA ++ K ++F +
Sbjct: 279 IDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEADEVSKGIAGDAVTFSTL 334
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 97/510 (19%), Positives = 189/510 (37%), Gaps = 93/510 (18%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLA--------------------YLKFQ---------- 34
GISPS YN++I+ L K+ A Y++ +
Sbjct: 293 GISPSIVTYNSIINGLCKAGRTSEADEVSKGIAGDAVTFSTLLHGYIEEENVKGILETKR 352
Query: 35 QMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAK 94
++ D D N +I + +G +++A K M G+ + TY +I+G+C
Sbjct: 353 RLEEDGVCIDLVMCNTIIKALLMVGALEDAYAFYKGMSGMDLVADSVTYCTMINGYCRVS 412
Query: 95 RVAEVFRVLEIMKE--------------------RNVCPNEATVRSLVH--GVFRCLDPH 132
R+ E + + ++ R++ NE ++ V + L +
Sbjct: 413 RIEEALEIFDEFRKTSISSCYLFFVQEGFFPGCMRSIHENEKETITVAFPVSVLKSLKKN 472
Query: 133 ----KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
A++L+I E P+ + + ++ L +A + + +G +
Sbjct: 473 GRILDAYKLVIGAEENLPVMDLVDYSIMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAY 532
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ + L L + + D+ K + P TY L+++L K G ++ + +
Sbjct: 533 NSVINGLCRQGCLVQAFRLFDSLEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVI 592
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
NV YN +ID +CK M+ A + +++ R I P+ T + LI+G+C ++
Sbjct: 593 KGFNPNVRVYNSLIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEG 652
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW----------GVPP 358
+ PD F ++ LC R E+A L EM++
Sbjct: 653 ALGFFFEFKKKDILPDFLGFMYLVRGLCAKGRMEEARGILREMLQTRSVLELINRVDTEI 712
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKM--------------------------QADRIS 392
T + I SLC G + ++ + ++ + R+
Sbjct: 713 ETESVESFIISLCEQGSIQEAVTVLNEVGSIFFPIGRRCRPQNRAEKEEKIYEGKGSRV- 771
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
PD ++ +LI S C ++ +A + ML
Sbjct: 772 PDFESYYSLIASLCSRGELLEANRKTRQML 801
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 214/486 (44%), Gaps = 36/486 (7%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+NAVI L + +D A F++M PD ++Y+ILI G CR G VD+A + K+M
Sbjct: 283 FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR 342
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G PN+Y+Y+ILIDGFC RV + V E MK + P+ + L+ G R D
Sbjct: 343 NSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMD 402
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A + +L+ + + A R M G P++ ++ +
Sbjct: 403 SAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHIL 462
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+ D N+ + + F + GV F+ Y
Sbjct: 463 SIYCRKPDFNKALALSEKFQENGV--HFNPY----------------------------- 491
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
SYN I C+ ++ ++A ++ M R++ P++V ++TLIS K K L
Sbjct: 492 ----SYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVML 547
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+ + + G + T+ +I+ + + A M E V P+ I Y L+ C
Sbjct: 548 FIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCN 607
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G++ R+ LF +M + SP++ T+ I + ++NK +A K + M G+ PD
Sbjct: 608 TGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQIL 667
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNG-CNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
Y+ LI A +G + A+ F M+Q G C P+ ++ + ++ + ++A + +
Sbjct: 668 YTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEM 727
Query: 492 KERGIS 497
+ +G+S
Sbjct: 728 RAKGLS 733
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/491 (21%), Positives = 205/491 (41%), Gaps = 35/491 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P+ Y I L K +A+ Q + + +N +I+G+C+ G++DEA
Sbjct: 240 GETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEA 299
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ K+M+ G P+VY+Y+ILIDGFC RV + V + M+ + PN + L+ G
Sbjct: 300 SEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDG 359
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KA E + +M + G LP+
Sbjct: 360 FCKEGRVDKALE-----------------------------------VFEEMKNSGILPD 384
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + D++ + P Y L++ YK+ + +
Sbjct: 385 VYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFR 444
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K + + + N ++ +C+ ++A + + ++ + N ++N I C+ +
Sbjct: 445 IMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGS 504
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
K +LL ++L+ PD ++++I C + E A+ +M + G+ N TY
Sbjct: 505 VPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYT 564
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
ILI + + + RLF+ M+ R+ PD + +L+ FC ++ +A F M
Sbjct: 565 ILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSRE 624
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G P+ +Y+ I +K + ++A + + M++ G PD +++ G A
Sbjct: 625 GCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRA 684
Query: 485 HDIVKTSKERG 495
+ K+ G
Sbjct: 685 EALFDEMKQEG 695
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 198/431 (45%), Gaps = 23/431 (5%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
G+ ++ +++I+I + A EVF + +R +V F + A
Sbjct: 80 GFENSINSFSIIIHTYALAGMSWEVFIL---------------IRDIV--TFYKEENRDA 122
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
EL+ ++ E +V + L+ ++NSM A + + D G + ++ + C
Sbjct: 123 GELVSLLLDVE--KSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKC 180
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA-GRDVE---GDRYLNHVFKDR 250
LV ++ + + IK G +P TY ++M + G V+ L ++
Sbjct: 181 LVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSG 240
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
NV +Y I CKV + A + + + ++ N FN +I G C+ + +
Sbjct: 241 ETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEAS 300
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
E+ + G PD ++++ +ID CR R + A + EM G+ PN +Y+ILI
Sbjct: 301 EVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGF 360
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C G V ++L +F++M+ I PD+Y+++ LI FCR ++ A K + M + P
Sbjct: 361 CKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSA 420
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
F+Y +LIK KS +F A + F M++ G PD+ N IL ++ F +A + +
Sbjct: 421 FNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEK 480
Query: 491 SKERGISFKSF 501
+E G+ F +
Sbjct: 481 FQENGVHFNPY 491
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/529 (21%), Positives = 218/529 (41%), Gaps = 49/529 (9%)
Query: 14 NAVIDALVK---SNS-IDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
N V D L+K SNS ++ A F + D + + + N L+ + VD L +
Sbjct: 136 NVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFE 195
Query: 70 QMEGLGYAPNVYTYTILIDGFCNA-------KRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+ G PN++TYTI+++ FC +R +E+ + + E PN T + +
Sbjct: 196 VLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGE---TPNVVTYGTYI 252
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + A+ L+ + N ++Y L + EA+ + ++M + G L
Sbjct: 253 KGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGIL 312
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ ++ + +++ + G+ P +Y +L++ K GR +
Sbjct: 313 PDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEV 372
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ ++ +V SY+++ID FC+ MD A + EM + +P+ + +LI G+ K
Sbjct: 373 FEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYK 432
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + ++ + G PD N ++ CR F AL + E GV N +
Sbjct: 433 SKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYS 492
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN I +C ++L+L M + PD+ ++ LI F + EKA F M
Sbjct: 493 YNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMT 552
Query: 423 TLGLR-----------------------------------PDNFSYSALIKALIKSGRFD 447
+G+ PD +Y++L+ +G
Sbjct: 553 KVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMT 612
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
A+ F M + GC+P+ T + ++ + +AH + + KERG+
Sbjct: 613 RARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGV 661
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 186/448 (41%), Gaps = 71/448 (15%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ Y+ +ID K +D A F++M PD ++Y+ILI G CR G +D A
Sbjct: 345 GILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSA 404
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ ++M ++P+ + Y LI G+ +K+ A + IM++ + P+ ++
Sbjct: 405 IKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSI 464
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R D +KA L +F E N ++R+ S+ +A +L M R LP+
Sbjct: 465 YCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPD 524
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL---------MEALYKAGR 235
+ ++C L+ + + K G+ TY +L M+ Y+ +
Sbjct: 525 VVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFK 584
Query: 236 DVEGDR-YLNHVFKDRLVS-------------------------NVNSYNMVIDCFCKVN 269
++ R Y + + LV+ NV +Y I+ + K+N
Sbjct: 585 GMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLN 644
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
++A ++ +M++R + P+ + + LI+ C E+++ L
Sbjct: 645 KNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEAL----------------- 687
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWG-VPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
EM + G PN + Y LI S + ++ +L+++M+A
Sbjct: 688 ------------------FDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRA 729
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEK 416
+S + ++ +S+C +++ K K
Sbjct: 730 KGLSRLCSSEGSVSESWCCRHQVLKTGK 757
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 133/316 (42%), Gaps = 13/316 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P T N ++ + + A ++ + + ++YN IH ICR V ++
Sbjct: 449 LGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEK 508
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK--ERNVCPNEATVRSL 121
AL+L+ M P+V Y+ LI C AKR+ V+ +K + + N T L
Sbjct: 509 ALQLLPVMLKRNVLPDVVNYSTLIS--CFAKRLNSEKAVMLFIKMTKVGITFNVKTYTIL 566
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++ A+ L E ++ +L+ N + A A+ +M G
Sbjct: 567 INLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGC 626
Query: 182 LPESSTFDYTVTCLVTG-LDL---NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
P T+ TC + L L N+ + + +RGV P Y +L+ A G
Sbjct: 627 SPNVVTY----TCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMN 682
Query: 238 EGDRYLNHVFKD-RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
+ + + ++ R NV Y +I+ + K+N D+A ++ EMR + ++ + ++
Sbjct: 683 RAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSV 742
Query: 297 ISGHCKDAEVHKTREL 312
C +V KT +L
Sbjct: 743 SESWCCRHQVLKTGKL 758
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/583 (22%), Positives = 246/583 (42%), Gaps = 89/583 (15%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG---- 59
G PS YNA++ L + +++A+ ++MS DR T +C+ G
Sbjct: 198 FGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGD 257
Query: 60 ----------------------------VVDEALRLVKQMEGLGYAPNVYTYTILIDGFC 91
+ +EA+ + +M Y PNV TY L+ GF
Sbjct: 258 ALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFL 317
Query: 92 NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF---------- 141
K++ R++ +M P+ + SLVH D A++L R
Sbjct: 318 KKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYV 377
Query: 142 ---------MEREPLT-------------QKLVCNTLLYRLSNNSMA---------SEAA 170
RE L + LV + +L +++ + A +A
Sbjct: 378 VYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAF 437
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
I+++M +G++P++ST+ +T L +++ + K GV P TY +L+++
Sbjct: 438 QIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSF 497
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
KAG + + + + NV +Y ++ + K + +A +I M PN
Sbjct: 498 CKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNA 557
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLL------ECGF----------KPDKFTFNSMIDC 334
+T++ LI G CK E+ K E+ L+ E F P+ T+ ++++
Sbjct: 558 ITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNG 617
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LC+A + DA D L M+ G PN I Y+ L+ C +G++ + +F +M P
Sbjct: 618 LCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPS 677
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
++T+ +LI + +++ A K ML P+ +Y+A++ L K+G ++A
Sbjct: 678 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLS 737
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
ME+ GC+P+ T +++ L + G+ + ++ K +G +
Sbjct: 738 LMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCA 780
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/532 (23%), Positives = 227/532 (42%), Gaps = 55/532 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y VI L ++ +D A+L FQ+M PD +TY ILI C+ G++++A
Sbjct: 447 GFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQA 506
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+M G +PNV TYT L+ + +K++ + + M PN T +L+ G
Sbjct: 507 QSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDG 566
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + KA E+ + + T + + + + S P
Sbjct: 567 LCKAGEIQKACEVYAKLIG----TSDNIESDFYFEGKDTDTIS---------------PN 607
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ V L +++ +LD + G +P Y L++ K G
Sbjct: 608 VVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFL 667
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K + +V++Y +ID K +D A ++ +M PN+VT+ ++ G CK
Sbjct: 668 RMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTG 727
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E K LL ++ + G P+ T+ ++ID L +A + + L+ +M G PN +TY
Sbjct: 728 ETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYR 787
Query: 365 ILIRSLCAIGDVAR---------------------------------SLRLFQKMQADRI 391
ILI CA G + SL L ++M++
Sbjct: 788 ILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDT 847
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS---YSALIKALIKSGRFDE 448
+P + LI SF + ++E A + M+ + + S +++LI+AL S + +E
Sbjct: 848 APIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEE 907
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
A + M + G PD +++ L+++ ++ EA + + G++++
Sbjct: 908 AVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGVNWEG 959
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/534 (23%), Positives = 211/534 (39%), Gaps = 99/534 (18%)
Query: 49 NILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
N+L+ C G+ EAL + +++ GY P+ TY L+ +A +V FRV + M
Sbjct: 173 NVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSA 232
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMAS 167
C + +TV S + + A +LL ERE ++C ++ L S+ +
Sbjct: 233 SGFCMDRSTVGSFAQALCKEGRWGDALDLL----EREDFKLDTVLCTQMISGLMEASLFN 288
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
EA + L +M Y+P T+ +T + L I++ + G P S + L+
Sbjct: 289 EAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLV 348
Query: 228 EALYKA---------------------------------GRDVEGDRYL----NHVFKDR 250
A GR+ + L V+++
Sbjct: 349 HTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEM 408
Query: 251 LVSN-----VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
LV++ +N+ N C C V ++A +I +EM + P+ T+ +I+ C+
Sbjct: 409 LVASCVLNKINTANFA-RCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKR 467
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP-------- 357
V K L + + G PD +T+ +ID C+A E A EM G
Sbjct: 468 VDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTA 527
Query: 358 ---------------------------PNTITYNILIRSLCAIGDVARSLRLFQKM---- 386
PN ITY+ LI LC G++ ++ ++ K+
Sbjct: 528 LLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTS 587
Query: 387 ------------QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
D ISP++ T+ AL+ C+ K+ A +ML G P+ Y
Sbjct: 588 DNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYD 647
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
AL+ K G D A++ FL M + G P +T +++ + + GR + A ++
Sbjct: 648 ALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL 701
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Query: 375 DVARSL-RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
D AR+ RL +++ D N L++ C +A + + G RP +Y
Sbjct: 148 DPARTAERLLREIGEDDRDVLGRLLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTY 207
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+AL++ L +G+ + A + M +G D T + L ++GR+ +A D+++
Sbjct: 208 NALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDLLE 263
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 205/436 (47%), Gaps = 45/436 (10%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
T+NI++ +C G AL L++QM PN TY +I GFC+ RV ++ M
Sbjct: 43 TFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREM 98
Query: 107 KERN-VCPNEATVRSLVHG---VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
+ER + PN+ T +++ G V R + K F+ ++ E +P ++Y
Sbjct: 99 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP-------EAVMYN--- 148
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
A++ D+G L + + D ++RGV +T
Sbjct: 149 --------ALIGGYCDQGKLDTALLYR-------------------DRMVERGVAMTVAT 181
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y LL+ AL+ GR E + + L +V +YN++I+ CK + +A EI M
Sbjct: 182 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 241
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
R + +VT+ +LI K +V +T +L + G +PD +N++I+ + +
Sbjct: 242 RRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 301
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
A + + EM + + P+ +TYN L+R LC +G V + +L +M I PD+ T+N LI
Sbjct: 302 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLI 361
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+ ++ A + M+ G P +Y+ALI+ L K+G+ D+A+ M +NG
Sbjct: 362 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 421
Query: 463 PDSYTSNLILETLVQQ 478
PD T ++E L +
Sbjct: 422 PDDSTYISLIEGLTTE 437
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 182/366 (49%), Gaps = 2/366 (0%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQM-EGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
+P+ TYN +I G C G V AL ++++M E G APN YTY +I G+C RV E
Sbjct: 69 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 128
Query: 101 RVL-EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
+V E++ + V P +L+ G A R +ER N L++
Sbjct: 129 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 188
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
L + +EA ++ +MG +G P+ T++ + ++ + I + +RGV+
Sbjct: 189 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 248
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
TY L+ AL K G+ E D+ + + + ++ YN +I+ +DRA EI
Sbjct: 249 VVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 308
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
EM + IAP+ VT+NTL+ G C V + R+L+ + + G +PD T+N++I
Sbjct: 309 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKG 368
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+DAL +EM+ G P +TYN LI+ LC G + + ++M + I+PD T+
Sbjct: 369 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 428
Query: 400 ALIQSF 405
+LI+
Sbjct: 429 SLIEGL 434
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 175/369 (47%), Gaps = 6/369 (1%)
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL-PESSTFD 189
P +A ELL + P + NT++ + A I+R+M +RG + P T+
Sbjct: 57 PARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYG 112
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRG-VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
++ ++E + D + +G VKP Y L+ G+ Y + + +
Sbjct: 113 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 172
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+ V +YN+++ A E+ EM + +AP++ T+N LI+GHCK+ V K
Sbjct: 173 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 232
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
E+ + G + T+ S+I L + + ++ E V G+ P+ + YN LI
Sbjct: 233 ALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 292
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
S G++ R+ + +M+ RI+PD T+N L++ C + ++++A K M G++P
Sbjct: 293 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQP 352
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
D +Y+ LI G +A + M G NP T N +++ L + G+ ++A ++V
Sbjct: 353 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMV 412
Query: 489 KTSKERGIS 497
K E GI+
Sbjct: 413 KEMVENGIT 421
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 148/332 (44%), Gaps = 1/332 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKPDRFTYNILIHGICRIGVVDE 63
GI+P+ Y VI K +D A F +M + + KP+ YN LI G C G +D
Sbjct: 103 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 162
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL +M G A V TY +L+ R E + ++E M + + P+ T L++
Sbjct: 163 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 222
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + + KA E+ R + +L+Y LS E + + RG P
Sbjct: 223 GHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP 282
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + T +++ I+ K+ + P TY LM L GR E + +
Sbjct: 283 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 342
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K + ++ +YN +I + + A I EM ++ P L+T+N LI G CK+
Sbjct: 343 DEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 402
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
+ ++ ++E G PD T+ S+I+ L
Sbjct: 403 GQGDDAENMVKEMVENGITPDDSTYISLIEGL 434
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 33/191 (17%)
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM----------------- 386
A ++M +P T T+NI++R LC+ G AR+L L ++M
Sbjct: 25 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCS 84
Query: 387 ---------------QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG-LRPDN 430
+ I+P+ YT+ +I +C++ ++++A K F MLT G ++P+
Sbjct: 85 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEA 144
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
Y+ALI G+ D A M + G T NL++ L GR EA+++V+
Sbjct: 145 VMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEE 204
Query: 491 SKERGISFKSF 501
+G++ F
Sbjct: 205 MGGKGLAPDVF 215
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ + Y ++I AL K + F + +PD YN LI+ G
Sbjct: 240 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 299
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+D A ++ +ME AP+ TY L+ G C RV E ++++ M +R + P+ T +
Sbjct: 300 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 359
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G D A + M + L N L+ L N +A ++++M + G
Sbjct: 360 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 419
Query: 181 YLPESSTFDYTVTCLVT 197
P+ ST+ + L T
Sbjct: 420 ITPDDSTYISLIEGLTT 436
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 208/427 (48%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F M+ + P ++ L+ I ++ + + L + +E LG + ++Y+++ LID FC
Sbjct: 61 FCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCR 120
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
R++ L M + P+ T SLV+G +A L+ + + ++
Sbjct: 121 CSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVI 180
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
NT++ L N A +L M G P+ T++ +T L + IL +
Sbjct: 181 YNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMM 240
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+ G+ P T+ +++ K G+ +E + + + + + N+ +YN +I+ C ++D
Sbjct: 241 RMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLD 300
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A ++ M + PN VT+NTL++G+CK V ++L ++ G D FT+N++
Sbjct: 301 EAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLY 360
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
C+A +F A L+ MV GV P+ T+N+L+ LC G + ++L + +Q
Sbjct: 361 QGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETV 420
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
I T+N +I+ C+ NK+E A F S+ G+ PD +Y+ ++ L + + EA +
Sbjct: 421 VGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHEL 480
Query: 453 FLSMEQN 459
+ M+++
Sbjct: 481 YRKMKKD 487
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 182/421 (43%), Gaps = 35/421 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I LGIS ++ +ID + + + LA +M +P T+ L++G C +
Sbjct: 99 IEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNR 158
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ EA+ LV Q+ GLGY PNV Y +ID C ++V VL M++ + P+ T
Sbjct: 159 IQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITY-- 216
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
N+L+ RL ++ +A IL M G
Sbjct: 217 ---------------------------------NSLITRLFHSGKWGVSARILSDMMRMG 243
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ TF + L E D I+R V P TY L+ L G E
Sbjct: 244 IHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAK 303
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ LN + N +YN +++ +CK +D A +I M + + T+NTL G+
Sbjct: 304 KVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGY 363
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ + + ++L ++ CG PD +TFN ++D LC + E AL L ++ +
Sbjct: 364 CQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGI 423
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITYNI+I+ +C V + LF + +SPD+ T+ ++ R +A + +
Sbjct: 424 ITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRK 483
Query: 421 M 421
M
Sbjct: 484 M 484
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 165/367 (44%), Gaps = 4/367 (1%)
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A L E PL + + LL ++ ++ R + G + +F +
Sbjct: 57 ALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLID 116
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
C L+ L +K G +P T+ L+ R E ++ +
Sbjct: 117 CFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEP 176
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV YN +ID C+ +D A ++ M I P+++T+N+LI+ + + +L
Sbjct: 177 NVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARIL 236
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++ G PD TF++MID + + +A EM++ V PN +TYN LI LC
Sbjct: 237 SDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIH 296
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G + + ++ M + P+ T+N L+ +C+ +++ A K M G+ D F+Y
Sbjct: 297 GLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTY 356
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA----HDIVK 489
+ L + ++G+F+ A++ M G PD YT N++L+ L + G+ E+A D+ K
Sbjct: 357 NTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQK 416
Query: 490 TSKERGI 496
+ GI
Sbjct: 417 SETVVGI 423
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 128/245 (52%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
S++ +IDCFC+ + + A +M P++VTF +L++G C + + L+ +
Sbjct: 110 SFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQI 169
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
+ G++P+ +N++ID LC + + ALD L+ M + G+ P+ ITYN LI L G
Sbjct: 170 VGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKW 229
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
S R+ M I PD+ TF+A+I F + ++ +A+K + M+ + P+ +Y++L
Sbjct: 230 GVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSL 289
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
I L G DEAK+ M G P++ T N ++ + R ++A I+ G+
Sbjct: 290 INGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGV 349
Query: 497 SFKSF 501
+F
Sbjct: 350 DGDTF 354
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 174/370 (47%), Gaps = 1/370 (0%)
Query: 129 LDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
L ++A L R +E ++ L +TL+ S S A + L KM G+ P T
Sbjct: 86 LKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVT 145
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
F V + E ++D + G +P Y ++++L + + LNH+
Sbjct: 146 FGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHME 205
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K + +V +YN +I + I +M I P+++TF+ +I K+ ++
Sbjct: 206 KMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLL 265
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ ++ +++ P+ T+NS+I+ LC ++A L+ MV G PN +TYN L+
Sbjct: 266 EAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLV 325
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
C V ++++ M D + D +T+N L Q +C+ + AEK M++ G+
Sbjct: 326 NGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVL 385
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD ++++ L+ L + G+ ++A ++++ T N+I++ + + + E+A +
Sbjct: 386 PDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYL 445
Query: 488 VKTSKERGIS 497
+ +G+S
Sbjct: 446 FCSLALKGVS 455
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 109/246 (44%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI P ++A+ID K + A ++ +M P+ TYN LI+G+C G++DE
Sbjct: 242 MGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDE 301
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +++ M G+ PN TY L++G+C +KRV + ++L +M V + T +L
Sbjct: 302 AKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQ 361
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + + A ++L R + L N LL L + +A L + +
Sbjct: 362 GYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVV 421
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + + + + + + +GV P TY +M L + +E
Sbjct: 422 GIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELY 481
Query: 244 NHVFKD 249
+ KD
Sbjct: 482 RKMKKD 487
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 75/157 (47%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+F DAL +M E P+ + ++ L+ ++ + + LF+ ++ IS D+Y+F+
Sbjct: 53 KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFS 112
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI FCR +++ A M+ LG P ++ +L+ R EA +
Sbjct: 113 TLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGL 172
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G P+ N I+++L + + + A D++ ++ GI
Sbjct: 173 GYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGI 209
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 205/441 (46%), Gaps = 2/441 (0%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
T++ILI+G+ + G++ +A L ++ G +++TYT ++D K++ E ++E +
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
P AT +L++G+ + +A +LL + ++ + +L+ L +
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
EA + ++M RG ++ + + L+ + + + T +G P T +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ L KAGR R + L N Y+ +I CK MD A E+ +M+
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P+ +T+N LI G CK +V R +LE G KPD +T+N +I C+A + A
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
+M PN +TY LI LC + ++ +Q M+ PD + +++L+ C
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ K+E F M G+ ++ + + LI L K+ R DEA F ++ + G P Y
Sbjct: 361 KSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPY 418
Query: 467 TSNLILETLVQQGRFEEAHDI 487
N I+ L++ G+ E +
Sbjct: 419 AYNSIISALIKSGKVNEGQAV 439
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 195/417 (46%), Gaps = 2/417 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G + Y ++D L K+ I A ++++ + C P TYN L++G+C++G ++EA
Sbjct: 29 GCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 88
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L++++ G P+V TYT LIDG KR E +++ + M R + + +L+ G
Sbjct: 89 IDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRG 148
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A + + + + +T++ L A I + M RG P
Sbjct: 149 LLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPN 208
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + L ++ +L K P TY +L++ L K+G + +
Sbjct: 209 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFD 268
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +V +YN++I FCK D A + +M +PN+VT+ TLISG CK
Sbjct: 269 EMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRR 328
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ K + E G PD F ++S++D LC++ + E EM GV N+ T
Sbjct: 329 QLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRT 387
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
LI LC V ++ LF ++ + + P Y +N++I + + K+ + + + M
Sbjct: 388 RLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM 443
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 153/346 (44%)
Query: 156 LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRG 215
L+ L M +A ++ ++ G + T+ V L + E +++ G
Sbjct: 5 LINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANG 64
Query: 216 VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT 275
P +TY L+ L K GR E L + + +V +Y +ID K A
Sbjct: 65 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAY 124
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
++ +EM R +A + V + LI G + ++ + + + G PD T ++MID L
Sbjct: 125 KLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGL 184
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
C+A R A+ M G+ PN + Y+ LI LC + +L + +M+ +PD
Sbjct: 185 CKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 244
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
T+N LI C+ + A F ML G +PD ++Y+ LI K+G D A F
Sbjct: 245 ITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD 304
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
M + C+P+ T ++ L ++ + +A + KERG SF
Sbjct: 305 MSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSF 350
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 107/206 (51%)
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
TF+ LI+G K + + L G D T+ +++D L + + ++A+ + ++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
G P TYN L+ LC +G + ++ L +K+ + +PD+ T+ +LI + +
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
+A K F M + GL D Y+ALI+ L+++G+ +A + +M GC PD T + +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 472 LETLVQQGRFEEAHDIVKTSKERGIS 497
++ L + GR A I K+ + RG++
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLA 206
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/487 (25%), Positives = 217/487 (44%), Gaps = 8/487 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNI--LIHGICRIGVVD 62
GI S N+++ +K+ +L + +Q+M D T + LI C G V
Sbjct: 186 GIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVA 245
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
L+ Q G P TY LI GFC AK A + VL M RN P T + ++
Sbjct: 246 RGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEII 305
Query: 123 HGVFR---CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+G+ + CL+ ++ F L +R +++ T+++ L EA + +M D+
Sbjct: 306 NGLCKNEECLEAYRVFNDL---KDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDK 362
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G P + T++ + + D C + + +G T ++ L G+ E
Sbjct: 363 GMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEA 422
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + + ++ +YN +I FCK +D + E+ +D P++ + LI
Sbjct: 423 FEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIK 482
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CKD + + LL + G P+ +T+++M+ ++ FE + +E G
Sbjct: 483 SCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTT 542
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
T T N +I LC+ G + +F+KM I D T+N+LI+ FC+ K+ K+
Sbjct: 543 TATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLN 602
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
++ GL+P SY++LI L ++G + AK+ + M G P + ++ L +QG
Sbjct: 603 ELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQG 662
Query: 480 RFEEAHD 486
R E D
Sbjct: 663 RATEGMD 669
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 198/469 (42%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
+T +I A S + Y Q P TYN LI G C+ ++
Sbjct: 227 NTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVL 286
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
M + P +YTY +I+G C + E +RV +K+R P+ +++HG+
Sbjct: 287 HTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEM 346
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+A +L M++ NT+L+ + A + +M ++GY + T
Sbjct: 347 GSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTC 406
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ ++ L + +E + + G++ TY L+ K G+ E LN +
Sbjct: 407 NKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVA 466
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+V+ Y ++I CK + A + +M + + PN T++T++ G K +
Sbjct: 467 QDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEH 526
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
REL G+ T N +I LC + ++A + +M E G+ + ITYN LIR
Sbjct: 527 VRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIR 586
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
C G V +S+ L ++ A + P ++ +LI C+ E A++ + M++ G+ P
Sbjct: 587 GFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEP 646
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
LI L K GR E + M +N P + E L+Q
Sbjct: 647 HANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAECLIQ 695
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/486 (23%), Positives = 204/486 (41%), Gaps = 18/486 (3%)
Query: 20 LVKSNSIDLAYLKFQQMSVDQ-CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAP 78
+ N++ L+ FQ + + C PD + N+L + V A ++V+ + G+ P
Sbjct: 98 VATQNNVLLSLRFFQWLCTNHDCTPDPISSNMLFEALLDAKAV-RAAKMVRDI--AGFIP 154
Query: 79 NVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELL 138
+ + + C + E V +KE + + S++ G CL K ELL
Sbjct: 155 DSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSG---CLKAGKT-ELL 210
Query: 139 IRFMER--------EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
F + + T+ + C L+ ++ + +L + G P + T++
Sbjct: 211 FEFYQEMIKAGTASDANTETVGC--LIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNK 268
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ + +L T I R P TY ++ L K +E R N +
Sbjct: 269 LIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRG 328
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+ Y +I C++ A ++ EM D+ + PN T+NT++ G K + +
Sbjct: 329 YAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERAC 388
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
EL + G+ T N +I LC + ++A + +M E G+ + ITYN LIR
Sbjct: 389 ELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGF 448
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C G V + L ++ A P + + LI C+ E A++ M + GL P+
Sbjct: 449 CKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNA 508
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
++Y ++ +KSG F+ ++ + G + T N I+ L +G+ +EA ++ K
Sbjct: 509 YTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKK 568
Query: 491 SKERGI 496
E GI
Sbjct: 569 MSETGI 574
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/460 (21%), Positives = 191/460 (41%), Gaps = 10/460 (2%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
PD + + +C +G ++EA+ + Q++ G ++ ++ G A + +F
Sbjct: 154 PDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEF 213
Query: 103 LEIMKERNVC--PNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
+ M + N TV L+ + +ELL +F++ N L+
Sbjct: 214 YQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGF 273
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC----GILDTFIKRGV 216
+ + +L M R +LP YT ++ GL NE C + + RG
Sbjct: 274 CQAKNYASMSEVLHTMIARNHLPTI----YTYQEIINGLCKNEECLEAYRVFNDLKDRGY 329
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
P Y ++ L + G E + + + N +YN ++ K +RA E
Sbjct: 330 APDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACE 389
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
+ EM ++ VT N +IS C + + E+ + E G + D T+NS+I C
Sbjct: 390 LYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFC 449
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
+ + ++ ++ L+E+V P+ Y +LI C GD + RL M + + P+ Y
Sbjct: 450 KEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAY 509
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
T++ ++ + E + + G + + +I L G+ DEA + F M
Sbjct: 510 TYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKM 569
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ G D+ T N ++ ++G+ ++ +++ +G+
Sbjct: 570 SETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGL 609
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 125/370 (33%), Gaps = 105/370 (28%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE- 63
G +T N +I L D A+ F++MS + D TYN LI G C+ G VDE
Sbjct: 398 GYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDER 457
Query: 64 ----------------------------------ALRLVKQMEGLGYAPNVYTYTILIDG 89
A RL+ M G PN YTY
Sbjct: 458 MNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYD----- 512
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
+++HG + D EL + T
Sbjct: 513 ------------------------------TMLHGSLKSGDFEHVRELYNETCNKGYGTT 542
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
CN ++ L + + EA+ + +KM + G ++ T++ + + ++ +L+
Sbjct: 543 TATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLN 602
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+ +G++P S+Y L+ L C+
Sbjct: 603 ELVAQGLQPSASSYASLIIQL-----------------------------------CQNG 627
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+ A + +M + I P+ LISG CK + + L+ +LE KP K F
Sbjct: 628 DAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFE 687
Query: 330 SMIDCLCRAH 339
+ +CL ++
Sbjct: 688 DLAECLIQSE 697
>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g55840-like [Cucumis sativus]
Length = 1079
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 227/494 (45%), Gaps = 3/494 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI YN ID+L +++ YL ++M P+ +YN LI+G + G + A
Sbjct: 240 GIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVA 299
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R+ +M L +PN+ TY ILI+G+C E R+L++M+ +V PNE T+ +L++G
Sbjct: 300 TRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNG 359
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+++ A +L R+ + ++ L N + EA +L +M G P+
Sbjct: 360 LYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPD 419
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + +LN+ ++ + G P + L+ K G EG ++
Sbjct: 420 IITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYA 479
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++ + N ++ C+ + A E + + PN VTF+ +I+G+
Sbjct: 480 AMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVG 539
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + ++ CG P FT+ S++ LC+ F +A L ++ + +TI+YN
Sbjct: 540 DGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYN 599
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI + G++ ++RLF++M + I PD YT+ ++ R ++ A F L
Sbjct: 600 TLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAF-IFLGRLMQ 658
Query: 425 G--LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
L ++ Y+ I L K+G+ A F ME+ G + D N I + + G+
Sbjct: 659 KEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVF 718
Query: 483 EAHDIVKTSKERGI 496
A ++ ++ + +
Sbjct: 719 SASSLISKTRNKNV 732
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/512 (23%), Positives = 223/512 (43%), Gaps = 35/512 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS N ++ ++VK+ L + F+QM + P+ ++NILI +C G + +A
Sbjct: 135 GFKPSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKA 194
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ ME GY P + +Y L+ C R ++ M+ + + + T +
Sbjct: 195 VNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDS 254
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R + + +L + + ++ NTL+ A + +M + P
Sbjct: 255 LCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPN 314
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + E +LD V+P T L+ LYK+ + L
Sbjct: 315 LITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILE 374
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+R N S+ ++ID C+ ++D A ++ EM + P+++TF+ LI+G CK
Sbjct: 375 RYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVG 434
Query: 305 EVHKTRELLVMLLECGFKP-----------------------------------DKFTFN 329
++K +E++ + GF P D FT N
Sbjct: 435 NLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCN 494
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
S++ LC + +A + L + G+ PN++T++ +I +GD + + +F KM +
Sbjct: 495 SLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISC 554
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
P +T+ +L++ C+ +A K + + L D SY+ LI + KSG EA
Sbjct: 555 GHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEA 614
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ F M QN PDSYT IL L+++GR
Sbjct: 615 VRLFEEMIQNNILPDSYTYTCILSGLIREGRL 646
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 204/456 (44%), Gaps = 35/456 (7%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
C + +++LI R G+V A+ M G+ P+VYT +++ R V+
Sbjct: 101 CSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVW 160
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
+ M VCPN ++ F +LI + + +K
Sbjct: 161 XFFKQMLTSRVCPNVSS-----------------FNILISVLCVQGKLKK---------- 193
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
A IL M GY+P +++ ++ ++ +G++
Sbjct: 194 --------AVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADV 245
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY + +++L + R +G L + + N SYN +I+ F K + AT + E
Sbjct: 246 CTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNE 305
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M + +++PNL+T+N LI+G+C + + LL ++ +P++ T ++++ L ++ +
Sbjct: 306 MIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAK 365
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
F+ A + L N I++ ++I LC G + + +L +M D + PDI TF+
Sbjct: 366 FDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSV 425
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI FC++ + KA++ + G P+N +S LI K G E + + +M NG
Sbjct: 426 LINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNG 485
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
N D++T N ++ +L + G+ EA + + G+
Sbjct: 486 QNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGL 521
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 116/525 (22%), Positives = 230/525 (43%), Gaps = 48/525 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ +++ +I K ++ + M+++ D FT N L+ +C G + EA
Sbjct: 450 GFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEA 509
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + +G PN T+ +I+G+ N + F V + M P+ T SL+
Sbjct: 510 EEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKV 569
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + +A +LL + + NTL+ +S + EA + +M LP+
Sbjct: 570 LCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPD 629
Query: 185 SSTFDYTVTCLVTGL--DLNETCGILDTFIKRGVKPRFST-----YLLLMEALYKAGRDV 237
S YT TC+++GL + C + F+ R ++ T Y ++ L+KAG+
Sbjct: 630 S----YTYTCILSGLIREGRLVCAFI--FLGRLMQKEILTLNSIVYTCFIDGLFKAGQSK 683
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ + L ++ + N + D + ++ + A+ + + R++++ PNL TFN L+
Sbjct: 684 AALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILL 743
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G+ + ++ +L ++ GF P++ T++S+I LC E + L +
Sbjct: 744 HGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESST 803
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA----------------- 400
+ +T+N+LIR C I D+ + + L M+ R+S D T A
Sbjct: 804 IDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVF 863
Query: 401 ------------------LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
+++ CR+ I+ A K M+ LG+ D+ + A+++ L
Sbjct: 864 MHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLAL 923
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
G+ +EA M + P + T ++ ++ F+EAH++
Sbjct: 924 CGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNL 968
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 131/557 (23%), Positives = 214/557 (38%), Gaps = 79/557 (14%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P+ YN +I+ VK I +A F +M P+ TYNILI+G C G +EAL
Sbjct: 276 ITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEAL 335
Query: 66 RLVKQMEGLGYAPNVYT-----------------------------------YTILIDGF 90
RL+ ME PN T +T++IDG
Sbjct: 336 RLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGL 395
Query: 91 CNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIR-----FMERE 145
C + E F++L M + V P+ T L++G + + +KA E++ + F+
Sbjct: 396 CRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNN 455
Query: 146 PLTQKLV------------------------------CNTLLYRLSNNSMASEAAAILRK 175
+ L+ CN+L+ L N EA L
Sbjct: 456 VIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHH 515
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
+ G +P S TFD + D + + D I G P TY L++ L K
Sbjct: 516 ISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQN 575
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
E + L + L + SYN +I K + A + EM +I P+ T+
Sbjct: 576 FWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTC 635
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM-----IDCLCRAHRFEDALDCLSE 350
++SG ++ + L L++ + T NS+ ID L +A + + AL E
Sbjct: 636 ILSGLIREGRLVCAFIFLGRLMQ----KEILTLNSIVYTCFIDGLFKAGQSKAALYLFKE 691
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M E G+ + I N + +G V + L K + + P++ TFN L+ + R
Sbjct: 692 MEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQD 751
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
I K + M G P+ +Y +LI L G + + D T N+
Sbjct: 752 IMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNM 811
Query: 471 ILETLVQQGRFEEAHDI 487
++ + ++ D+
Sbjct: 812 LIRKCCEINDLDKVIDL 828
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/494 (20%), Positives = 207/494 (41%), Gaps = 3/494 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS Y +++ L K + A +++ D +YN LI I + G + EA
Sbjct: 555 GHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEA 614
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL-EIMKERNVCPNEATVRSLVH 123
+RL ++M P+ YTYT ++ G R+ F L +M++ + N +
Sbjct: 615 VRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFID 674
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+F+ KA L + ME + L+ L+ N++ S A++++ K ++ +
Sbjct: 675 GLFKA-GQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVI 733
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P +TF+ + G D+ + + + G P TY L+ L G G +
Sbjct: 734 PNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKM 793
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + + ++NM+I C++N +D+ ++ M ++ + T + +
Sbjct: 794 LKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVR 853
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ +L+ GF P + +M+ +CR + A +MV G+ +
Sbjct: 854 RMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAA 913
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
++R L G + ++ + Q+M + P TF L+ FC+ + ++A M
Sbjct: 914 ECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILME 973
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
++ D +Y+ LI A +G A + ++Q G P+ T +++ + +
Sbjct: 974 HYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVS 1033
Query: 483 EAHDIVKTSKERGI 496
++K +RG+
Sbjct: 1034 RGEIVLKDLNDRGL 1047
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 107/498 (21%), Positives = 210/498 (42%), Gaps = 3/498 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS +G+ P++ ++ +I+ A+ F +M P FTY L+ +C+
Sbjct: 516 ISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQN 575
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
EA +L+K++ + A + +Y LI + + E R+ E M + N+ P+ T
Sbjct: 576 FWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTC 635
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
++ G+ R AF L R M++E LT +V + L + A + ++M ++
Sbjct: 636 ILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEK 695
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G + + + ++ + V P +T+ +L+ Y G+D+
Sbjct: 696 GLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHG-YSRGQDIMS 754
Query: 240 -DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ N + + N +Y+ +I C M++ ++ + + +TFN LI
Sbjct: 755 CFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIR 814
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
C+ ++ K +L + DK T ++ D L R ++ + EM++ G P
Sbjct: 815 KCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIP 874
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ Y +++ +C +GD+ + +L +M A IS D A+++ KIE+A
Sbjct: 875 TSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWIL 934
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
ML + P +++ L+ K F EA + ME D N+++
Sbjct: 935 QRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCAN 994
Query: 479 GRFEEAHDIVKTSKERGI 496
G A D + K++G+
Sbjct: 995 GDVITALDFYEEIKQKGL 1012
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 49/122 (40%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGIS A++ L I+ A Q+M + P T+ L+H C+ E
Sbjct: 905 LGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKE 964
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L ME ++ Y +LI C V E +K++ + PN T R LV
Sbjct: 965 AHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVS 1024
Query: 124 GV 125
+
Sbjct: 1025 AI 1026
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/502 (25%), Positives = 226/502 (45%), Gaps = 41/502 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P L +I I+ A ++ ++ KPD F YN +I G C+ VD A
Sbjct: 107 GYKPDVILCTKLIKGFFNMKKIEKA-IQVMEILEKHGKPDVFAYNAVISGFCKADRVDHA 165
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ +M+ G+ P+V TY ILI FC R+ RV++ + + N P T L+
Sbjct: 166 SKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEA 225
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+TQ + EA +L +M RG P+
Sbjct: 226 T---------------------ITQGGI--------------DEAMKLLDEMLSRGLRPD 250
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ V + L+ L K G STY +L+ L G+ G++ ++
Sbjct: 251 RYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMS 310
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ N +Y+ +I C+ +D A + + M+++ +AP+ +++ LIS C++
Sbjct: 311 DMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREG 370
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V E L ++ G PD ++NS++ LC+ ++AL+ ++ E G PPN +YN
Sbjct: 371 KVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYN 430
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML-T 423
L +L + GD R+L + +M ++ I PD T+N+LI CR +++A + M +
Sbjct: 431 TLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFES 490
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG---- 479
+P SY+ ++ L K R +A + +M GC P+ T L+++ + G
Sbjct: 491 EKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYD 550
Query: 480 RFEEAHDIVKTSKERGISFKSF 501
E A+ +V SFK F
Sbjct: 551 AMELANLLVNMDAISEDSFKRF 572
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 225/472 (47%), Gaps = 11/472 (2%)
Query: 34 QQMSVDQCKPDRFTYNI---------LIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYT 84
QQ V++ KP + + ++ C+ DE+L ++ M GY P+V T
Sbjct: 57 QQFRVNETKPTKHDQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCT 116
Query: 85 ILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMER 144
LI GF N K++ + +V+EI+ E++ P+ +++ G + A ++L R +R
Sbjct: 117 KLIKGFFNMKKIEKAIQVMEIL-EKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKR 175
Query: 145 EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNET 204
+ N L+ A ++ ++ P T+ + +T ++E
Sbjct: 176 GFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEA 235
Query: 205 CGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
+LD + RG++P TY +++ + K G +L+ + K+ V+ V++YN+++
Sbjct: 236 MKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRD 295
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
+ ++ +M + PN +T++TLI+ C+D ++ + + +L ++ E PD
Sbjct: 296 LLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPD 355
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
++++ +I LCR + + A++ L +M+ G P+ ++YN ++ SLC G+ +L +F+
Sbjct: 356 GYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFE 415
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
K+ P+ ++N L + +A ML+ G+ PD +Y++LI L + G
Sbjct: 416 KLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDG 475
Query: 445 RFDEAKQTFLSM-EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
D+A + + M E C P + N +L L + R +A +++ G
Sbjct: 476 LVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEG 527
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 125/267 (46%), Gaps = 36/267 (13%)
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
CK D + + M +R P+++ LI G ++ K +++ +L + G KPD
Sbjct: 88 CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDV 146
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
F +N++I C+A R + A L M + G P+ +TYNILI + C G + +LR+ +
Sbjct: 147 FAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQ 206
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
+ D P + T+ LI++ I++A K ML+ GLRPD ++Y+ ++ + K G
Sbjct: 207 LLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGM 266
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE----------------------- 482
D A + + +NGC T N++L L+ +G++E
Sbjct: 267 LDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYST 326
Query: 483 ------------EAHDIVKTSKERGIS 497
EA +++K KE+ ++
Sbjct: 327 LITALCRDGKIDEAKNVLKVMKEKALA 353
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 117/300 (39%), Gaps = 36/300 (12%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS G YN ++ L+ + M V C+P+ TY+ LI +CR G
Sbjct: 277 ISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGK 336
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+DEA ++K M+ AP+ Y+Y LI C +V
Sbjct: 337 IDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKV------------------------ 372
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
A E L + L L N++L L N A EA I K+G+ G
Sbjct: 373 -----------DLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVG 421
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P + +++ L + D G++ + G+ P TY L+ L + G +
Sbjct: 422 CPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAI 481
Query: 241 RYLNHVFK-DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L +F+ ++ V SYN V+ CKV + A E+ M + PN T+ LI G
Sbjct: 482 ELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQG 541
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 221/462 (47%), Gaps = 17/462 (3%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ +YN ++ ALV S I LA + +M C P+R TYN+L+ G+C+ G+ +AL++
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKM 229
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+M G PNV YT+L+ CNA ++ E ++L MK++ P+E T + + G+ +
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
++AF+ L+ + + L+ L E + M +R P+
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL-NHV 246
+ + + + LD K+G P Y +++ L G D+E L + +
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHG-DLERAHTLRSEM 408
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
++ LV + + ++I CK ++D A +I EM + P ++T+N LI G ++ +
Sbjct: 409 LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRL 468
Query: 307 HKTRELLVMLLECGFKPDKF--------------TFNSMIDCLCRAHRFEDALDCLSEMV 352
+ R +L +E G P F + ++ +C++ + A L ++
Sbjct: 469 EEAR-MLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSII 527
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
+ GV P+ +TYN LI LC ++ ++RLF+++Q ISPD T+ LI R ++
Sbjct: 528 DSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREN 587
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
A F ++L G P Y++++++L + + +A +L
Sbjct: 588 DAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWL 629
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 122/498 (24%), Positives = 221/498 (44%), Gaps = 23/498 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ S+ + A++ A + A F +M Q +P F YN ++ + GV+ A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M G APN TY +L+DG C + ++ + M +R + PN L+
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +LL ++ L ++ N L L +EA L + D G+
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ +CL+ GL +E G T ++R + P Y +++ +AGR +
Sbjct: 312 LKGY----SCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDAL 367
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+L+ + K V + YN V+ C ++RA + EM ++ + T +I G
Sbjct: 368 SFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGL 427
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN- 359
CK V + ++ + E G P T+N++ID R R E+A +M E G P+
Sbjct: 428 CKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSL 486
Query: 360 ----TITYNI---------LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
T+ N L+ +C G V ++ +L + + + PD+ T+N LI C
Sbjct: 487 FLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLC 546
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ ++ A + F + G+ PD +Y LI L+++ R ++A F ++ Q+G +P
Sbjct: 547 KARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLS 606
Query: 467 TSNLILETLVQQGRFEEA 484
N ++ +L + + +A
Sbjct: 607 IYNSMMRSLCRMKKLSQA 624
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 184/436 (42%), Gaps = 13/436 (2%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
G + + L+ +A R A+ + M E P +++ + A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
L R + + N L+ L MA +A + +M DRG +P + ++
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
L ++E +L + +G P TY + L K GR E + L +
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
+ Y+ +ID + D + M +R+I+P++V + +I G + + L
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
++ + GF PD F +N+++ LC E A SEM++ + ++ T I+I LC G
Sbjct: 372 VMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRG 431
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM-----------LT 423
V ++++F +M P + T+NALI F R ++E+A F M LT
Sbjct: 432 LVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLT 491
Query: 424 LGLRP--DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
LG D+ S L+ + +SG+ +A + S+ +G PD T N ++ L +
Sbjct: 492 LGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNL 551
Query: 482 EEAHDIVKTSKERGIS 497
+ A + K + +GIS
Sbjct: 552 DGAVRLFKELQLKGIS 567
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 97/446 (21%), Positives = 182/446 (40%), Gaps = 35/446 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T YN V+ L ++ A+ +M + D T I+I G+C+ G+VDEA
Sbjct: 377 GFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEA 436
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ +M G P V TY LIDGF R+ E + M+ N N + L G
Sbjct: 437 MQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGN---NPSLFLRLTLG 493
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D E L + L++ + + +A +LR + D G +P+
Sbjct: 494 ANQVCDS-------------ESLRK------LVHDMCQSGQVLKAYKLLRSIIDSGVVPD 534
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L +L+ + +G+ P TY L++ L +A R+ +
Sbjct: 535 VVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQ 594
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF----NTLISGH 300
++ + +++ YN ++ C++ + +A + D P F L + H
Sbjct: 595 NILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWL-----DYLPKKYNFPVESEVLANAH 649
Query: 301 --CKDAEVHK-TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
+D + REL+ + E G+ + + LC+ R +DAL + E+G+
Sbjct: 650 KEIEDGSLDDGVRELIKIDQEYGYISSN-PYTIWLIGLCQVRRTDDALRIFHTLQEFGID 708
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
+LI LC ++ ++ + + I N L++ C + + A+
Sbjct: 709 ITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQAL 768
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKS 443
+ M +G D + K +I+S
Sbjct: 769 AWRMHLVGYDMDVYLREPTKKFVIQS 794
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 221/462 (47%), Gaps = 17/462 (3%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ +YN ++ ALV S I LA + +M C P+R TYN+L+ G+C+ G+ +AL++
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKM 229
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+M G PNV YT+L+ CNA ++ E ++L MK++ P+E T + + G+ +
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
++AF+ L+ + + L+ L E + M +R P+
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL-NHV 246
+ + + + LD K+G P Y +++ L G D+E L + +
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHG-DLERAHTLRSEM 408
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
++ LV + + ++I CK ++D A +I EM + P ++T+N LI G ++ +
Sbjct: 409 LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRL 468
Query: 307 HKTRELLVMLLECGFKPDKF--------------TFNSMIDCLCRAHRFEDALDCLSEMV 352
+ R +L +E G P F + ++ +C++ + A L ++
Sbjct: 469 EEAR-MLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSII 527
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
+ GV P+ +TYN LI LC ++ ++RLF+++Q ISPD T+ LI R ++
Sbjct: 528 DSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREN 587
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
A F ++L G P Y++++++L + + +A +L
Sbjct: 588 DAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWL 629
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 122/498 (24%), Positives = 221/498 (44%), Gaps = 23/498 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ S+ + A++ A + A F +M Q +P F YN ++ + GV+ A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M G APN TY +L+DG C + ++ + M +R + PN L+
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +LL ++ L ++ N L L +EA L + D G+
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ +CL+ GL +E G T ++R + P Y +++ +AGR +
Sbjct: 312 LKGY----SCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDAL 367
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+L+ + K V + YN V+ C ++RA + EM ++ + T +I G
Sbjct: 368 SFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGL 427
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN- 359
CK V + ++ + E G P T+N++ID R R E+A +M E G P+
Sbjct: 428 CKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSL 486
Query: 360 ----TITYNI---------LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
T+ N L+ +C G V ++ +L + + + PD+ T+N LI C
Sbjct: 487 FLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLC 546
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ ++ A + F + G+ PD +Y LI L+++ R ++A F ++ Q+G +P
Sbjct: 547 KARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLS 606
Query: 467 TSNLILETLVQQGRFEEA 484
N ++ +L + + +A
Sbjct: 607 IYNSMMRSLCRMKKLSQA 624
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 184/436 (42%), Gaps = 13/436 (2%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
G + + L+ +A R A+ + M E P +++ + A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
L R + + N L+ L MA +A + +M DRG +P + ++
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
L ++E +L + +G P TY + L K GR E + L +
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
+ Y+ +ID + D + M +R+I+P++V + +I G + + L
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
++ + GF PD F +N+++ LC E A SEM++ + ++ T I+I LC G
Sbjct: 372 VMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRG 431
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM-----------LT 423
V ++++F +M P + T+NALI F R ++E+A F M LT
Sbjct: 432 LVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLT 491
Query: 424 LGLRP--DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
LG D+ S L+ + +SG+ +A + S+ +G PD T N ++ L +
Sbjct: 492 LGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNL 551
Query: 482 EEAHDIVKTSKERGIS 497
+ A + K + +GIS
Sbjct: 552 DGAVRLFKELQLKGIS 567
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 156/375 (41%), Gaps = 37/375 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T YN V+ L ++ A+ +M + D T I+I G+C+ G+VDEA
Sbjct: 377 GFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEA 436
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ +M G P V TY LIDGF R+ E + M+ N N + L G
Sbjct: 437 MQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGN---NPSLFLRLTLG 493
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D E L + L++ + + +A +LR + D G +P+
Sbjct: 494 ANQVRDS-------------ESLRK------LVHDMCQSGQVLKAYKLLRSIIDSGVVPD 534
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L +L+ + +G+ P TY L++ L +A R+ +
Sbjct: 535 VVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQ 594
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF----NTLISGH 300
++ + +++ YN ++ C++ + +A + D P F L + H
Sbjct: 595 NILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWL-----DYLPKKYNFPVESEVLANAH 649
Query: 301 --CKDAEVHK-TRELLVMLLECG-FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+D + REL+ + E G + +T + LC+ R +DAL + E+G+
Sbjct: 650 KEIEDGSLDDGVRELIKIDQEYGSISSNPYTI--WLIGLCQVRRTDDALRIFHTLQEFGI 707
Query: 357 PPNTITYNILIRSLC 371
+LI LC
Sbjct: 708 DITPACCALLINYLC 722
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 135/510 (26%), Positives = 233/510 (45%), Gaps = 40/510 (7%)
Query: 6 ISPSTRLYNA---VIDALVKSNSIDLAYLK------------FQQMSVDQC-KPDRFTYN 49
+SP+ L+++ ++ +L ++ IDL L F+ +S + +Y
Sbjct: 48 VSPTKPLHSSLKRILPSLTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYC 107
Query: 50 ILIHGICRIGVVDEA---LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
+ H +C ++ EA L+ V +G A +V+T + G + VF VL
Sbjct: 108 TMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARG---THQSNLVFSVLM-- 162
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
N T +C + L I F C L RL ++
Sbjct: 163 -------NAYTDSGYFSDAIQCFRLVRKHNLQIPFHS---------CGYLFDRLMKLNLT 206
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
S A A ++ D GY P+ F+ + L +NE + KRG++P ++ L
Sbjct: 207 SPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTL 266
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ K+G +G R + ++R+ +V +Y+++I+ CK +D A ++ EM DR +
Sbjct: 267 INGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGL 326
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN VTF TLI+GHC E+ +L G KPD T+N++I+ LC+ +A
Sbjct: 327 VPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKK 386
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
+ EM + G+ P+ TY +LI C GD+ +L + ++M + I D F ALI FC
Sbjct: 387 LVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFC 446
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R ++ +AE+ ML G++PD+ +Y+ +I K G + M+ +G P
Sbjct: 447 REGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVV 506
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGI 496
T N++L L +QG+ + A+ ++ G+
Sbjct: 507 TYNVLLNGLCKQGQMKNANMLLDAMLNLGV 536
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 187/430 (43%), Gaps = 42/430 (9%)
Query: 16 VIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLG 75
+ D L+K N A+ ++++ PD +N+L+H +C+ ++EA L ++ G
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG 255
Query: 76 YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAF 135
P V ++ LI+G+C + + + FR+ M E V P+ T L++G
Sbjct: 256 LRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLING----------- 304
Query: 136 ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT-- 193
L +A + +M DRG +P TF +
Sbjct: 305 ------------------------LCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGH 340
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
C+ DL I +++GVKP TY L+ L K G E + + + + L
Sbjct: 341 CVTGRADLGME--IYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKP 398
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+ +Y M+ID CK ++ A EI +EM I + V F LISG C++ +V + L
Sbjct: 399 DKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTL 458
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+LE G KPD T+ +I C+ + L EM G P +TYN+L+ LC
Sbjct: 459 REMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQ 518
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G + + L M + PD T+N L++ C+ E +K GL D SY
Sbjct: 519 GQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKL---QSEKGLVQDYGSY 575
Query: 434 SALIKALIKS 443
++LI L K+
Sbjct: 576 TSLIGDLRKT 585
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 177/381 (46%), Gaps = 9/381 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P +N ++ L K + I+ A L F ++ +P ++N LI+G C+ G +D+
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL + M P+V+TY++LI+G C ++ + ++ M +R + PN+ T +L++G
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
E+ + + + + NTL+ L EA ++ +M RG P+
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + DL I +K G++ + L+ + G+ +E +R L
Sbjct: 400 KFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLR 459
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + + +Y MVI FCK + ++ +EM+ P +VT+N L++G CK
Sbjct: 460 EMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQG 519
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ LL +L G PD T+N +++ C+ ED D L E G+ + +Y
Sbjct: 520 QMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNRED-FDKLQS--EKGLVQDYGSYT 576
Query: 365 ILIRSLCAIGDVARSLRLFQK 385
L IGD+ ++ + QK
Sbjct: 577 SL------IGDLRKTCKERQK 591
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 98/186 (52%)
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
+L+CG+ PD FN ++ LC+ H+ +A E+ + G+ P +++N LI C G+
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+ + RL + M +R+ PD++T++ LI C+ +++ A K F M GL P++ +++
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTT 335
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
LI +GR D + + M + G PD T N ++ L + G EA +V +RG
Sbjct: 336 LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG 395
Query: 496 ISFKSF 501
+ F
Sbjct: 396 LKPDKF 401
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 135/510 (26%), Positives = 233/510 (45%), Gaps = 40/510 (7%)
Query: 6 ISPSTRLYNA---VIDALVKSNSIDLAYLK------------FQQMSVDQ-CKPDRFTYN 49
+SP+ L+++ ++ +L ++ IDL L F+ +S + +Y
Sbjct: 48 VSPTKPLHSSLKRILPSLTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYC 107
Query: 50 ILIHGICRIGVVDEA---LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
+ H +C ++ EA L+ V +G A +V+T + G + VF VL
Sbjct: 108 TMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARG---THQSNLVFSVLM-- 162
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
N T +C + L I F C L RL ++
Sbjct: 163 -------NAYTDSGYFSDAIQCFRLVRKHNLQIPFHS---------CGYLFDRLMKLNLT 206
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
S A A ++ D GY P+ F+ + L +NE + KRG++P ++ L
Sbjct: 207 SPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTL 266
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ K+G +G R + ++R+ +V +Y+++I+ CK +D A ++ EM DR +
Sbjct: 267 INGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGL 326
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN VTF TLI+GHC E+ +L G KPD T+N++I+ LC+ +A
Sbjct: 327 VPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKK 386
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
+ EM + G+ P+ TY +LI C GD+ +L + ++M + I D F ALI FC
Sbjct: 387 LVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFC 446
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R ++ +AE+ ML G++PD+ +Y+ +I K G + M+ +G P
Sbjct: 447 REGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVV 506
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGI 496
T N++L L +QG+ + A+ ++ G+
Sbjct: 507 TYNVLLNGLCKQGQMKNANMLLDAMLNLGV 536
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 170/390 (43%), Gaps = 39/390 (10%)
Query: 16 VIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLG 75
+ D L+K N A+ ++++ PD +N+L+H +C+ ++EA L ++ G
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG 255
Query: 76 YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAF 135
P V ++ LI+G+C + + + FR+ M E V P+ T L++G
Sbjct: 256 LRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLING----------- 304
Query: 136 ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT-- 193
L +A + +M DRG +P TF +
Sbjct: 305 ------------------------LCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGH 340
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
C+ DL I +++GVKP TY L+ L K G E + + + + L
Sbjct: 341 CVTGRADLGME--IYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKP 398
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+ +Y M+ID CK ++ A EI +EM I + V F LISG C++ +V + L
Sbjct: 399 DKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTL 458
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+LE G KPD T+ +I C+ + L EM G P +TYN+L+ LC
Sbjct: 459 REMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQ 518
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQ 403
G + + L M + PD T+N L++
Sbjct: 519 GQMKNANMLLDAMLNLGVVPDDITYNILLE 548
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 155/329 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P +N ++ L K + I+ A L F ++ +P ++N LI+G C+ G +D+
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL + M P+V+TY++LI+G C ++ + ++ M +R + PN+ T +L++G
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
E+ + + + + NTL+ L EA ++ +M RG P+
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + DL I +K G++ + L+ + G+ +E +R L
Sbjct: 400 KFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLR 459
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + + +Y MVI FCK + ++ +EM+ P +VT+N L++G CK
Sbjct: 460 EMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQG 519
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMID 333
++ LL +L G PD T+N +++
Sbjct: 520 QMKNANMLLDAMLNLGVVPDDITYNILLE 548
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 98/186 (52%)
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
+L+CG+ PD FN ++ LC+ H+ +A E+ + G+ P +++N LI C G+
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+ + RL + M +R+ PD++T++ LI C+ +++ A K F M GL P++ +++
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTT 335
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
LI +GR D + + M + G PD T N ++ L + G EA +V +RG
Sbjct: 336 LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG 395
Query: 496 ISFKSF 501
+ F
Sbjct: 396 LKPDKF 401
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 231/497 (46%), Gaps = 42/497 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI+P+ +YN ++D K+ + A L +++M PD T+NIL+ G + G +++
Sbjct: 346 MGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIED 405
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+ RL+K + G + Y +++ C A R+ E ++L+ + E+ + + SL+
Sbjct: 406 SDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIG 465
Query: 124 GVFRCLDPHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
R KAFE R M R T CN+LL L EA +L +M ++G+
Sbjct: 466 AYSRAGLEDKAFEAY-RIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGF- 523
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+N+ Y +L++ +K ++EG ++
Sbjct: 524 -----------------PINKV-----------------AYTVLLDGYFKM-NNLEGAQF 548
Query: 243 LNHVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L K+R + + ++ +ID K ++ A E+ EM PN +N+LI G C
Sbjct: 549 LWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLC 608
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
V + +L + + G D FTFN +ID CR + + A++ +M G+ P+
Sbjct: 609 DCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIF 668
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
T+NILI C D+ + + KM + + PDI T+N + +CRM K+ +A +
Sbjct: 669 TFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQL 728
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
++ G+ PD +Y+ ++ I S D A + + G P+ T+N++L +QG
Sbjct: 729 ISAGIVPDTVTYNTMLSG-ICSDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMP 787
Query: 482 EEAHDIVKTSKERGISF 498
E+A ++ K R ISF
Sbjct: 788 EKA--LIWGQKLREISF 802
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 217/474 (45%), Gaps = 10/474 (2%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP +N +I+A +A M +P T+ ++H +CR G V EA +
Sbjct: 279 SPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARK 338
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L ++ +G APN Y L+DG+ A+ VA+ + E M+ V P+ T LV G +
Sbjct: 339 LFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHY 398
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA-----SEAAAILRKMGDRGY 181
+ + LL ++ + L ++ LY + +S+ EA +L+++ ++G
Sbjct: 399 KYGRIEDSDRLL-----KDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGL 453
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
F+ + ++ ++ G P ST L+ L + G E
Sbjct: 454 TLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARI 513
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + + N +Y +++D + K+N ++ A + +EM++R I P+ V F LI G
Sbjct: 514 LLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLS 573
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K V + E+ + + GF P+ F +NS+I LC R +AL EM + G+ +T
Sbjct: 574 KAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTF 633
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
T+NI+I C G + ++ F MQ + PDI+TFN LI +C+ + A + M
Sbjct: 634 TFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKM 693
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ GL PD +Y+ + + + ++A + G PD+ T N +L +
Sbjct: 694 YSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGI 747
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 201/452 (44%), Gaps = 35/452 (7%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F+ M +P T+N +I G CR V L+ M +P+V T+ ILI+ C
Sbjct: 235 FKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCI 294
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
R L +M V P+ AT +++H + R
Sbjct: 295 GGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCR------------------------- 329
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
EA + + D G P ++ ++ + ++ + + +
Sbjct: 330 ----------EGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMR 379
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
GV P T+ +L+ YK GR + DR L + L + + Y++++ C +D
Sbjct: 380 TTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLD 439
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A ++ +E+ ++ + ++V FN+LI + + K E +++ CGF P T NS++
Sbjct: 440 EAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLL 499
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
LCR ++A L M+E G P N + Y +L+ + ++ + L+++M+ I
Sbjct: 500 MGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIY 559
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PD F ALI + +E+A + F M +G P+NF+Y++LI+ L GR EA +
Sbjct: 560 PDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKL 619
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
M Q G D++T N+I++ ++G+ + A
Sbjct: 620 EKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFA 651
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/495 (25%), Positives = 220/495 (44%), Gaps = 2/495 (0%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G PS +NA+I + + + + M C PD T+NILI+ C G
Sbjct: 240 FKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTW 299
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A+ + M G P+V T+T ++ C V E ++ + +++ + PN A +L+
Sbjct: 300 VAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLM 359
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
G F+ + +A LL M ++ V N L++ ++ +L+ + G
Sbjct: 360 DGYFKAREVAQA-SLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGL 418
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+SS +D V+ L L+E +L +++G+ + L+ A +AG + +
Sbjct: 419 FLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFE 478
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + + ++ N ++ C+ + A + M ++ N V + L+ G+
Sbjct: 479 AYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYF 538
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + + L + E G PD F ++ID L +A E+A + EM G PN
Sbjct: 539 KMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNF 598
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
YN LIR LC G V +L+L ++M+ + D +TFN +I FCR +++ A + F M
Sbjct: 599 AYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDM 658
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+GL PD F+++ LI K+ A + M G +PD T N + + +
Sbjct: 659 QRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKM 718
Query: 482 EEAHDIVKTSKERGI 496
+A I+ GI
Sbjct: 719 NQAVIILDQLISAGI 733
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/461 (23%), Positives = 195/461 (42%), Gaps = 35/461 (7%)
Query: 76 YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAF 135
Y + L+ GF N E VL +M+ V P +++ L+ + R D +
Sbjct: 173 YESDFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVW 232
Query: 136 ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCL 195
+L + + P L N ++ ++L M P+ TF+ +
Sbjct: 233 KLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINAC 292
Query: 196 VTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNV 255
G L ++ GV+P +T+ ++ AL + G VE + + + + N
Sbjct: 293 CIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNA 352
Query: 256 NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
YN ++D + K + +A+ + EMR ++P+ VTFN L+ GH K + + LL
Sbjct: 353 AIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKD 412
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
L+ G D ++ M+ LC A R ++A+ L E++E G+ + + +N LI + G
Sbjct: 413 LIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGL 472
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCR---------------------------- 407
++ ++ M +P T N+L+ CR
Sbjct: 473 EDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTV 532
Query: 408 -------MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
MN +E A+ + M G+ PD +++ALI L K+G +EA + FL M G
Sbjct: 533 LLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIG 592
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
P+++ N ++ L GR EA + K +++G+ +F
Sbjct: 593 FVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTF 633
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 88/187 (47%), Gaps = 1/187 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S +G P+ YN++I L + A ++M D FT+NI+I G CR G
Sbjct: 588 MSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQ 647
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A+ M+ +G P+++T+ ILI G+C A + ++ M + P+ T +
Sbjct: 648 MKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNT 707
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+HG R ++A +L + + + + NT+L + ++ + A + K+ G
Sbjct: 708 YMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICSD-ILDRAMILTAKLLKMG 766
Query: 181 YLPESST 187
++P T
Sbjct: 767 FIPNVIT 773
>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 529
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 219/492 (44%), Gaps = 49/492 (9%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+PS + ++ +LVK+N + +QM + + T +ILI+ ++G +
Sbjct: 9 TPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFS 68
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+ + GY + T+T LI G C + + + + + N+ + +L++G+
Sbjct: 69 VFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLC 128
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A E L R + ++ NT++ L + + ++A + +M + P
Sbjct: 129 KVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVV 188
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + L L + G+L I + P
Sbjct: 189 TYNTLICGLCIMAQLKDAIGLLHKMILEDINP---------------------------- 220
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
V +++++ID FCK M A + M D+ PN+VT+N+L+ GH V
Sbjct: 221 -------TVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVV 273
Query: 307 HKTR-----------ELLVMLLECGFK---PDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
K + E + + E FK PD +NS+ID LC++ R AL + EM
Sbjct: 274 KKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMH 333
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
G PP+ TYN L+ +LC V +++ L K++ I P + T+N LI C+ +++
Sbjct: 334 YRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLK 393
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
AEK F +L G D ++Y+A+IK K G FDE M+ +GC+PD+ +I+
Sbjct: 394 DAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIII 453
Query: 473 ETLVQQGRFEEA 484
+L +G ++A
Sbjct: 454 RSLFDKGENDKA 465
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 145/302 (48%), Gaps = 22/302 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P +YN +ID L K ++ A+ + +M + P TYN LI G+C + + +A+
Sbjct: 148 VQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAI 207
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV--H 123
L+ +M P VYT++ILID FC ++ E V +M + +V PN T SL+ H
Sbjct: 208 GLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGH 267
Query: 124 GVFRCLDPHKA-FELLIRFME-----------REPLTQKLVCNTLLYRLSNNSMASEAAA 171
+ + K+ F +I+ ++ ++ ++ N+L+ L + A
Sbjct: 268 HLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALK 327
Query: 172 ILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY 231
+ +M RG P+ T++ + L +++ +L +G++P TY +L+ L
Sbjct: 328 FIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLC 387
Query: 232 KAGRDVEGDRYLNHVFKDRLVSNVN----SYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
K+GR + ++ VF+D LV N +YN +I FCK + D + +M+D +
Sbjct: 388 KSGRLKDAEK----VFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCS 443
Query: 288 PN 289
P+
Sbjct: 444 PD 445
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 104/230 (45%)
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
+ ++ K N + R+M +A NLVT + LI+ + + + + + +L
Sbjct: 15 FGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVFANIL 74
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
+ G+ D TF ++I LC AL ++V G N ++Y LI LC +G
Sbjct: 75 KKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTR 134
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+L +++ + PD+ +N +I C+ + A +F M+ + P +Y+ LI
Sbjct: 135 AALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLI 194
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
L + +A M NP YT +++++ ++G+ +EA ++
Sbjct: 195 CGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNV 244
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 65/124 (52%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F I P +YN++ID L KS A +M PD FTYN L+ +C+
Sbjct: 297 MHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYH 356
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD+A+ L+ +++ G P+V TY ILI+G C + R+ + +V E + + + T +
Sbjct: 357 VDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNA 416
Query: 121 LVHG 124
++ G
Sbjct: 417 MIKG 420
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ + G P YN+++DAL K+ +D A ++ +P TYNILI+G+C+ G
Sbjct: 332 MHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGR 391
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPN----EA 116
+ +A ++ + + GY +VYTY +I GFC E ++ MK+ P+ E
Sbjct: 392 LKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEI 451
Query: 117 TVRSL 121
+RSL
Sbjct: 452 IIRSL 456
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 210/488 (43%), Gaps = 21/488 (4%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y +I+A + + A + PD Y + G CR G+ A RL M
Sbjct: 77 YTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMP 136
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G A +TY L+ G C A V E V M P+ +VHG+
Sbjct: 137 QRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAG 196
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A LL M + + V N L+ + A I + M +G LP T+ +
Sbjct: 197 EAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLI 256
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+ + I+ G+ P TY L++ G R L+ + L
Sbjct: 257 CGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLA 316
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
N + ++ID CK ++ A + + + I N V + ++I CK + L
Sbjct: 317 PNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNL 376
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+ ++ GF PD ++S+ID LCR ++ +A+ L++M+E GV N + + ILI
Sbjct: 377 MQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILID---- 432
Query: 373 IGDVARSLRLFQ----KMQADRIS-----PDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+ LR F+ KM +DR++ PD+ T+ I+S+C+ ++E AE M+
Sbjct: 433 -----KHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMID 487
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+RP+ +Y+ LIK G +A + +M NGC P+ + ++L L+++ +
Sbjct: 488 HGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSY-- 545
Query: 484 AHDIVKTS 491
HD+V S
Sbjct: 546 -HDLVADS 552
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 193/448 (43%), Gaps = 4/448 (0%)
Query: 49 NILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
N L+ + R G++ + L +M N++TYT LI+ +C+A + R L +
Sbjct: 47 NTLLMALARHGMLSDMESLAARMP----VRNLHTYTTLINAYCHAGDLPAAKRHLSSLLR 102
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE 168
+ P+ S V G R A L + +R LL L M E
Sbjct: 103 AGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVRE 162
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A A+ M G P+S + V L E +L + +G P + Y L++
Sbjct: 163 AMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALID 222
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
G + + NV +Y +I FCK ++RA + M + +AP
Sbjct: 223 GYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAP 282
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
N+VT+ TLI G C + + LL + CG P+++T +ID LC+ R E+A L
Sbjct: 283 NVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFL 342
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
+V+ G+ N + Y +I +LC G + L QK+ + PD + +++LI CR
Sbjct: 343 GSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRE 402
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
NK+ +A M+ G++ + ++ LI ++ R D K M G PD T
Sbjct: 403 NKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTY 462
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGI 496
+ + + Q GR E+A ++ + G+
Sbjct: 463 TVFIRSYCQDGRMEDAESMMIQMIDHGV 490
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/488 (23%), Positives = 204/488 (41%), Gaps = 16/488 (3%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y A++ L + + A F M D C PD Y+I++HG+C G EA+ L+
Sbjct: 147 YAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAM 206
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G G+ PNV Y LIDG+C+ + + + M+ + PN T L+ G +
Sbjct: 207 GKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVE 266
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A L R +E + TL+ + A +L M G P T +
Sbjct: 267 RAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLI 326
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L + E L + +++G+K Y +++AL K+G+ + + + V
Sbjct: 327 DALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFV 386
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+ + Y+ +ID C+ N + A + +M + + N V F LI H ++ + +
Sbjct: 387 PDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMI 446
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+ G KPD T+ I C+ R EDA + +M++ GV PN TYN LI+
Sbjct: 447 SDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYAN 506
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQ----------------SFCRMNKIEKAEK 416
+G V+++ + M + P+ ++ L+ S ++ ++ E+
Sbjct: 507 LGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEE 566
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
++ L ++ Y I+ L K R +EAK + M+ P ++E
Sbjct: 567 LLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCY 626
Query: 477 QQGRFEEA 484
+ +EA
Sbjct: 627 RMKLLKEA 634
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 233/511 (45%), Gaps = 26/511 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ +YNA+ID + ++LA F+ M C P+ TY LI G C+ G V+ A
Sbjct: 209 GFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERA 268
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +M G APNV TYT LI G C+ + FR+L M+ + PNE T L+
Sbjct: 269 MVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDA 328
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A + L +++ +++ +++ L + A +++K+ G++P+
Sbjct: 329 LCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPD 388
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + L L E +L+ I+ GV+ + +L++ K R+ D
Sbjct: 389 AHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILID---KHLREFRSDS--P 443
Query: 245 HVFKDRLVS-----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ DR+ + +V +Y + I +C+ M+ A + +M D + PNL T+NTLI G
Sbjct: 444 KMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKG 503
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL-------------- 345
+ V + L +++ G KP+ ++ ++ L + + + D +
Sbjct: 504 YANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKV 563
Query: 346 --DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
+ L E+++ + Y+ IR L + + + MQ+ ++P + +I+
Sbjct: 564 LEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIE 623
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
RM +++A + SM+ P SY +I AL + G F AK F + N
Sbjct: 624 CCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNR 683
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
D ++++ L+Q+G + ++ +E+
Sbjct: 684 DEIAWKILIDGLLQKGNTADCSRLLSFMEEQ 714
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 150/378 (39%), Gaps = 16/378 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + +Y ++IDAL KS D A+ Q++ + PD Y+ LI G+CR + EA
Sbjct: 349 GIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEA 408
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ M G N +TILID R + + M V P+ T +
Sbjct: 409 ISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRS 468
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A ++I+ ++ NTL+ +N + S+A + L+ M D G P
Sbjct: 469 YCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPN 528
Query: 185 SSTFDYTVTCLVTG----------------LDLNETCGILDTFIKRGVKPRFSTYLLLME 228
++ + L+ +D+ +L+ IK Y +
Sbjct: 529 DESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIR 588
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
L K R E +L + L + + Y +I+C ++ ++ A M R+ P
Sbjct: 589 CLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLP 648
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
L ++ +I C++ H + + +L + D+ + +ID L + D L
Sbjct: 649 RLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLL 708
Query: 349 SEMVEWGVPPNTITYNIL 366
S M E P + Y+ L
Sbjct: 709 SFMEEQNCRPGSAIYSRL 726
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 216/475 (45%), Gaps = 9/475 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSV--DQCKPDRFTYNILIHGICRIGVV 61
LGI PS YN ++D+ +K D + ++M C P+ TYN++I G+ R G +
Sbjct: 198 LGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDL 257
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
+EA LV+ M L + +TY LI G V +V+ + M+ + P T ++
Sbjct: 258 EEAAELVEGMR-LSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAM 316
Query: 122 VHGVFRCLDPHKAFELLIRFMEREP---LTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
+HG+ + A ++F E L + N+LL EA + +
Sbjct: 317 IHGLLQSGLVEAA---QVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRR 373
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P T++ + DL E + + ++G P TY +LM+
Sbjct: 374 AGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAM 433
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + L + +YN I + + RA E+ + I+ + VT+N LI
Sbjct: 434 AREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIH 493
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G CK + +EL + ++ G +PD T+ +I C +A + M+ G+ P
Sbjct: 494 GLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLP 553
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ +T+ ++I + C G++ + F+KM + + P+ T+N LI + CRM + + A F
Sbjct: 554 SAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHF 613
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
ML GL + ++Y+ LI K G +++A + + M QNG +PD T +++
Sbjct: 614 HEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVK 668
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 205/466 (43%), Gaps = 3/466 (0%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F++M+ PD N ++ + D+ + ++M LG P++ TY L+D F
Sbjct: 157 FREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLK 216
Query: 93 AKRVAEVFRVLEIMKER--NVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQK 150
R +V +L+ M+ R PN+ T ++ G+ R D +A E L+ M
Sbjct: 217 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAE-LVEGMRLSKKASS 275
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
N L+ L + + +M + G +P T++ + L+ +
Sbjct: 276 FTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAE 335
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
G+ P TY L+ KAG E + + L V +YN+ ID +C++
Sbjct: 336 MRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGD 395
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
++ A + EM ++ PN+ T+ L+ G + RE +L G +PD F +N+
Sbjct: 396 LEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNT 455
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
I AL+ ++ G+ +T+TYNILI LC G++ + L KM ++
Sbjct: 456 RICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNG 515
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ PD T+ LI + C + +A K F +M++ GL P +++ +I A + G A
Sbjct: 516 LQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAY 575
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
F M + G P+ T N+++ L + GR + A ERG+
Sbjct: 576 GWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGL 621
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 177/401 (44%), Gaps = 35/401 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ YNA+I L++S ++ A +KF +M PD TYN L++G C+ G + EA
Sbjct: 305 GIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEA 364
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L + G AP V TY I IDG+C + E + E M E+ PN T L+ G
Sbjct: 365 LLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKG 424
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
VC+ +MA E +M +G P+
Sbjct: 425 SLN------------------------VCSL--------AMARE---FFDEMLSKGLQPD 449
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + + D+ + + + G+ TY +L+ L K G +
Sbjct: 450 CFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQM 509
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L + +Y +I C+ ++ A +I M + P+ VTF +I +C+
Sbjct: 510 KMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRG 569
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ +LE G +P++ T+N +I LCR R + A EM+E G+ N TY
Sbjct: 570 NLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYT 629
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+LI C +G+ ++R + +M + I PD T AL++ F
Sbjct: 630 LLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF 670
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
AF M + G+ PD + +++AL + R+D+ M Q G P T N +L++ +
Sbjct: 156 AFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFL 215
Query: 477 QQGRFEEAHDIVKTSKERG 495
++GR ++ ++K + RG
Sbjct: 216 KEGRKDKVAMLLKEMETRG 234
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/544 (23%), Positives = 230/544 (42%), Gaps = 63/544 (11%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
T L +I L++++ D A +M + C P+ TY L+ G + + R++
Sbjct: 107 TVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIIN 166
Query: 70 QMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
M G PN + L+ +CNA+ +++L+ M + P + +
Sbjct: 167 MMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGE 226
Query: 130 D-PHKAFELLIRFMEREPLTQKLVCNTL--------LYRLSNNSMASEAAAILRKMGDRG 180
+ P L + E L V N + L + MA + I++ M +G
Sbjct: 227 ELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQ---IIKVMMGKG 283
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
++P++ST+ +T L + + + + GV P TY +L+++ KAG +
Sbjct: 284 FVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQAR 343
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + +NV +Y ++ + K + +A++I M D PN +T++ L+ G
Sbjct: 344 SWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGL 403
Query: 301 CKDAEVHKTRELLVMLLEC----------------GFKPDKFTFNSMIDCLCRAHRFEDA 344
CK E+ K E+ L+ P+ T+ ++ID LC+AH+ DA
Sbjct: 404 CKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDA 463
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ----------------- 387
+ L M+ G PN I Y+ LI C +G + + +F +M
Sbjct: 464 QELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDA 523
Query: 388 --ADR----------------ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
DR +P++ T+ A+I CR+ + +KA K M G P+
Sbjct: 524 MFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPN 583
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y+ALI L KSG+ D + Q F+ M GC P+ T +++ G +EAH ++
Sbjct: 584 VVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLS 643
Query: 490 TSKE 493
K+
Sbjct: 644 EMKQ 647
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 210/500 (42%), Gaps = 87/500 (17%)
Query: 27 DLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTIL 86
D+A+ + M PD TY+ +I +C V++A L ++M+ +G P+VYTYTIL
Sbjct: 270 DMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTIL 329
Query: 87 IDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREP 146
ID FC A + + + M+ N T +L+H +++ +
Sbjct: 330 IDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHA----------------YLKAKQ 373
Query: 147 LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
L Q A+ I +M D G P + T+ V L ++ + C
Sbjct: 374 LPQ-------------------ASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACE 414
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+ I +V D Y D + NV +Y +ID C
Sbjct: 415 VYTKLIG-------------------TSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLC 455
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K + + A E+ M PN + ++ LI G CK ++ +E+ + + +CG+ P
Sbjct: 456 KAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVH 515
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+ S+ID + + R + A+ LS+MVE PN +TY +I LC IG+ ++L+L M
Sbjct: 516 TYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMM 575
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ SP++ T+ ALI + K++ + + F M T G P+ +Y LI +G
Sbjct: 576 EEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLL 635
Query: 447 DEA-------KQTFL--------------------------SMEQNGCNPDSYTSNLILE 473
DEA KQT+ +E +G P + L+++
Sbjct: 636 DEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLID 695
Query: 474 TLVQQGRFEEAHDIVKTSKE 493
+ GR EEA ++ K E
Sbjct: 696 NFSKAGRLEEALELHKEMME 715
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 128/550 (23%), Positives = 239/550 (43%), Gaps = 58/550 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG---- 59
G PS YNA++ L + +D+ + ++MS D+FT +C+ G
Sbjct: 34 FGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSD 93
Query: 60 ----------------------------VVDEALRLVKQMEGLGYAPNVYTYTILIDGFC 91
+ DEA+ + +M PNV TY L+ GF
Sbjct: 94 ALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFL 153
Query: 92 NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL 151
K++ R++ +M + PN + SLVH D A++LL R + +
Sbjct: 154 KKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYV 213
Query: 152 VCNTLL------YRLSNNSMASEAAAILRKM-GDRGYLPESSTFDYTVTCLVTGLDLNET 204
N + L + + + A + +M L + +T ++ CL +
Sbjct: 214 AYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFA-RCLCGMGKFDMA 272
Query: 205 CGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS-NVNSYNMVID 263
I+ + +G P STY ++ L +A + VE L K V+ +V +Y ++ID
Sbjct: 273 FQIIKVMMGKGFVPDTSTYSKVITFLCEAMK-VEKAFLLFQEMKSVGVNPDVYTYTILID 331
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
FCK ++++A EMR + N+VT+ L+ + K ++ + ++ +++ G P
Sbjct: 332 SFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPP 391
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG----------------VPPNTITYNILI 367
+ T+++++D LC+A + A + ++++ + PN +TY LI
Sbjct: 392 NTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALI 451
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC V + L M ++ P+ ++ALI FC++ KI+ A++ F M G
Sbjct: 452 DGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYL 511
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P +Y++LI A+ K R D A + M ++ C P+ T +++ L + G ++A +
Sbjct: 512 PTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKL 571
Query: 488 VKTSKERGIS 497
+ +E+G S
Sbjct: 572 LSMMEEKGCS 581
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 126/505 (24%), Positives = 222/505 (43%), Gaps = 44/505 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T Y+ VI L ++ ++ A+L FQ+M PD +TY ILI C+ G++++A
Sbjct: 283 GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQA 342
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+M +G + NV TYT L+ + AK++ + + M + PN T +LV G
Sbjct: 343 RSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDG 402
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN-NSMASEAAAILRKMGDRGYLP 183
+ + + KA E+ + + T V + + + +S+A P
Sbjct: 403 LCKAGEIQKACEVYTKLIG----TSDNVGSDFYFEGKHTDSIA----------------P 442
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ + L + + +LD + G +P Y L++ K G+
Sbjct: 443 NVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVF 502
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ K + V++Y +ID K +D A ++ +M + PN+VT+ +I G C+
Sbjct: 503 LRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRI 562
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E K +LL M+ E G P+ T+ ++ID L ++ + + +L +M G PN +TY
Sbjct: 563 GECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTY 622
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+LI CA G + + L +M+ + + +++Q F K F + L
Sbjct: 623 RVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGF---------SKKFIASLG 673
Query: 424 L-------GLRPDNFSYSALIKALIKSGRFDEAKQTF-----LSMEQNGCNPDSYTSNLI 471
L G P Y LI K+GR +EA + LS N + D YTS +
Sbjct: 674 LLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTS--L 731
Query: 472 LETLVQQGRFEEAHDIVKTSKERGI 496
++ L + E+A ++ +G+
Sbjct: 732 IQALCLASQLEKAFELYSEITRKGV 756
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/518 (22%), Positives = 210/518 (40%), Gaps = 99/518 (19%)
Query: 70 QMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
+++ GY P+ TY L+ A ++ FRV + M E C ++ TV + C
Sbjct: 30 ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQAL--CK 87
Query: 130 DPHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+ + L++ +ERE ++C ++ L S+ EA + L +M +P T+
Sbjct: 88 EGRWSDALVM--IEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTY 145
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL---------YK------- 232
+T + L I++ +K G P S + L+ + YK
Sbjct: 146 RTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMAD 205
Query: 233 ------------------AGRDVEGDRYL---NHVFKDRLVSN-----VNSYNMVIDCFC 266
G ++ L V+++ L S+ VN+ N C C
Sbjct: 206 CGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFA-RCLC 264
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
+ D A +I + M + P+ T++ +I+ C+ +V K L + G PD +
Sbjct: 265 GMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVY 324
Query: 327 TFNSMIDCLCRAHRFE-----------------------------------DALDCLSEM 351
T+ +ID C+A E A D + M
Sbjct: 325 TYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRM 384
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM----------------QADRISPDI 395
++ G PPNTITY+ L+ LC G++ ++ ++ K+ D I+P++
Sbjct: 385 IDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNV 444
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
T+ ALI C+ +K+ A++ +ML+ G P++ Y ALI K G+ D A++ FL
Sbjct: 445 VTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLR 504
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
M + G P +T +++ + + R + A ++ E
Sbjct: 505 MSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVE 542
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 131/318 (41%), Gaps = 47/318 (14%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G P+ Y ++IDA+ K +DLA QM C P+ TY +I G+CRIG
Sbjct: 505 MSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGE 564
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+AL+L+ ME G +PNV TYT LIDG + +V ++ M + PN T R
Sbjct: 565 CQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRV 624
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L++ + EA ++L +M +
Sbjct: 625 LIN-----------------------------------HCCAAGLLDEAHSLLSEM-KQT 648
Query: 181 YLPESSTFDYTVTCLVTGLDLN--ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
Y P+ + +V G + G+L+ G P Y LL++ KAGR E
Sbjct: 649 YWPK---YLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEE 705
Query: 239 GDRYLNHVFKDRLVSNVNS---YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
+ + N+ S Y +I C + +++A E+ E+ + + P L F
Sbjct: 706 ALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVC 765
Query: 296 LISGHCKDAEVHKTRELL 313
LI G K V+K E L
Sbjct: 766 LIKGLIK---VNKWNEAL 780
>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/497 (24%), Positives = 229/497 (46%), Gaps = 13/497 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKPDRFTYNILIHGICRIGVVDEALR 66
P + +N + + KS A + + S+ D T NI I+ +C +
Sbjct: 72 PCIQDFNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIAINCLCHMRKTTLGFA 131
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++ M +G P + T +++G C V ++E M+ N T +LV+G+
Sbjct: 132 VLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLC 191
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ D A E L + ++R +V N +L L + EA +L +MG P
Sbjct: 192 KIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVV 251
Query: 187 TFDYTVTCLVTGL-----DLNETCGILDTFI-KRGVKPRFSTYLLLMEALYKAGRDVEGD 240
T++ CL+ GL E G+ + + ++G+ P T+ +L++ K G + +
Sbjct: 252 TYN----CLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAE 307
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM--RDRDIAPNLVTFNTLIS 298
+ + + + NV +YN +I +C + M+ A + M P++VT N+LI
Sbjct: 308 SVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIH 367
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G CK EV K LL ++ G PD FT+ S+I C + A + M E G P
Sbjct: 368 GWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVP 427
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N T +++ L + ++ LF+ M + DI +N ++ C+M K+ A K
Sbjct: 428 NLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLL 487
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+L GL+ D+++Y+ +IK L + G D+A++ M++NGC P+ + N+ ++ L+++
Sbjct: 488 SCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRK 547
Query: 479 GRFEEAHDIVKTSKERG 495
+ ++ K++G
Sbjct: 548 YDIARSRKYLQIMKDKG 564
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 194/422 (45%), Gaps = 11/422 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG + R Y A+++ L K A ++M P+ YN ++ G+C+ G+V E
Sbjct: 174 LGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGE 233
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNA----KRVAEVFRVLEIMKERNVCPNEATVR 119
AL L+ +M + PNV TY LI G C + +F E++ E+ + P+ T
Sbjct: 234 ALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFN--EMVAEKGIVPDVQTFS 291
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKM-- 176
LV G + +A E ++ FM R + +V N+L+ S EA + M
Sbjct: 292 ILVDGFCKEGLLLRA-ESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVR 350
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
G LP T + + ++++ +L + +G+ P T+ L+ + +
Sbjct: 351 EGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKP 410
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
+ + + V N+ + +V+D K + A + R M + ++V +N +
Sbjct: 411 LAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIM 470
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ G CK +++ R+LL +L G K D +T+N MI LCR +DA + L +M E G
Sbjct: 471 LDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGC 530
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
PPN +YN+ ++ L D+ARS + Q M+ D T LI+ F N+ +K+ K
Sbjct: 531 PPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATTAELLIR-FLSANEEDKSFK 589
Query: 417 AF 418
F
Sbjct: 590 EF 591
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 204/436 (46%), Gaps = 45/436 (10%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
T+NI++ +C G AL L++QM PN TY +I GFC+ RV ++ M
Sbjct: 116 TFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREM 171
Query: 107 KERN-VCPNEATVRSLVHG---VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
+ER + PN+ T +++ G V R + K F+ ++ E +P ++Y
Sbjct: 172 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP-------EAVMYN--- 221
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
A++ D+G L + + D ++RGV +T
Sbjct: 222 --------ALIGGYCDQGKLDTALLYR-------------------DRMVERGVAMTVAT 254
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y LL+ AL+ GR E + + L +V +YN++I+ CK + +A EI M
Sbjct: 255 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 314
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
R + +VT+ LI K +V +T +L + G +PD +N++I+ + +
Sbjct: 315 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 374
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
A + + EM + + P+ +TYN L+R LC +G V + +L +M I PD+ T+N LI
Sbjct: 375 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLI 434
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+ ++ A + M+ G P +Y+ALI+ L K+G+ D+A+ M +NG
Sbjct: 435 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 494
Query: 463 PDSYTSNLILETLVQQ 478
PD T ++E L +
Sbjct: 495 PDDSTYISLIEGLTTE 510
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 182/366 (49%), Gaps = 2/366 (0%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQM-EGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
+P+ TYN +I G C G V AL ++++M E G APN YTY +I G+C RV E
Sbjct: 142 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 201
Query: 101 RVL-EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
+V E++ + V P +L+ G A R +ER N L++
Sbjct: 202 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 261
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
L + +EA ++ +MG +G P+ T++ + ++ + I + +RGV+
Sbjct: 262 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 321
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
TY L+ AL K G+ E D+ + + + ++ YN +I+ +DRA EI
Sbjct: 322 VVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 381
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
EM + IAP+ VT+NTL+ G C V + R+L+ + E G +PD T+N++I
Sbjct: 382 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKG 441
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+DAL +EM+ G P +TYN LI+ LC G + + ++M + I+PD T+
Sbjct: 442 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 501
Query: 400 ALIQSF 405
+LI+
Sbjct: 502 SLIEGL 507
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 175/369 (47%), Gaps = 6/369 (1%)
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL-PESSTFD 189
P +A ELL + P + NT++ + A I+R+M +RG + P T+
Sbjct: 130 PARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYG 185
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRG-VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
++ ++E + D + +G VKP Y L+ G+ Y + + +
Sbjct: 186 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 245
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+ V +YN+++ A E+ EM + +AP++ T+N LI+GHCK+ V K
Sbjct: 246 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 305
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
E+ + G + T+ ++I L + + ++ E V G+ P+ + YN LI
Sbjct: 306 ALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 365
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
S G++ R+ + +M+ RI+PD T+N L++ C + ++++A K M G++P
Sbjct: 366 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQP 425
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
D +Y+ LI G +A + M G NP T N +++ L + G+ ++A ++V
Sbjct: 426 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMV 485
Query: 489 KTSKERGIS 497
K E GI+
Sbjct: 486 KEMVENGIT 494
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 147/332 (44%), Gaps = 1/332 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKPDRFTYNILIHGICRIGVVDE 63
GI+P+ Y VI K +D A F +M + + KP+ YN LI G C G +D
Sbjct: 176 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 235
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL +M G A V TY +L+ R E + ++E M + + P+ T L++
Sbjct: 236 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 295
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + + KA E+ R + L+Y LS E + + RG P
Sbjct: 296 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 355
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + T +++ I+ K+ + P TY LM L GR E + +
Sbjct: 356 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 415
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + + ++ +YN +I + + A I EM ++ P L+T+N LI G CK+
Sbjct: 416 DEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 475
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
+ ++ ++E G PD T+ S+I+ L
Sbjct: 476 GQGDDAENMVKEMVENGITPDDSTYISLIEGL 507
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ + Y A+I AL K + F + +PD YN LI+ G
Sbjct: 313 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 372
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+D A ++ +ME AP+ TY L+ G C RV E ++++ M ER + P+ T +
Sbjct: 373 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 432
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G D A + M + L N L+ L N +A ++++M + G
Sbjct: 433 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 492
Query: 181 YLPESSTFDYTVTCLVT 197
P+ ST+ + L T
Sbjct: 493 ITPDDSTYISLIEGLTT 509
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 33/191 (17%)
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM----------------- 386
A ++M +P T T+NI++R LC+ G AR+L L ++M
Sbjct: 98 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCS 157
Query: 387 ---------------QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG-LRPDN 430
+ I+P+ YT+ +I +C++ ++++A K F MLT G ++P+
Sbjct: 158 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEA 217
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
Y+ALI G+ D A M + G T NL++ L GR EA+++V+
Sbjct: 218 VMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEE 277
Query: 491 SKERGISFKSF 501
+G++ F
Sbjct: 278 MGGKGLAPDVF 288
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA-------DRISP- 393
+ AL L+ + P+++ N+L+ + A+ A SLRL+ +M++ + P
Sbjct: 31 DKALSPLAVLPHLDGAPSSLP-NLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPL 89
Query: 394 --------------DIY---------TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
D++ TFN +++ C K +A + M RP+
Sbjct: 90 LSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNA 145
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSM-EQNGCNPDSYTSNLILETLVQQGRFEEA 484
+Y+ +I GR A M E+ G P+ YT ++ + GR +EA
Sbjct: 146 VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEA 200
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 221/462 (47%), Gaps = 17/462 (3%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ +YN ++ ALV S I LA + +M C P+R TYN+L+ G+C+ G+ +AL++
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKM 229
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+M G PNV YT+L+ CNA ++ E ++L MK++ P+E T + + G+ +
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
++AF+ L+ + + L+ L E + M +R P+
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL-NHV 246
+ + + + LD K+G P Y +++ L G D+E L + +
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHG-DLERAHTLRSEM 408
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
++ LV + + ++I CK ++D A +I EM + P ++T+N LI G ++ +
Sbjct: 409 LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRL 468
Query: 307 HKTRELLVMLLECGFKPDKF--------------TFNSMIDCLCRAHRFEDALDCLSEMV 352
+ R +L +E G P F + ++ +C++ + A L ++
Sbjct: 469 EEAR-MLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSII 527
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
+ GV P+ +TYN LI LC ++ ++RLF+++Q ISPD T+ LI R ++
Sbjct: 528 DSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREN 587
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
A F ++L G P Y++++++L + + +A +L
Sbjct: 588 DAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWL 629
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 122/498 (24%), Positives = 221/498 (44%), Gaps = 23/498 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ S+ + A++ A + A F +M Q +P F YN ++ + GV+ A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M G APN TY +L+DG C + ++ + M +R + PN L+
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +LL ++ L ++ N L L +EA L + D G+
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ +CL+ GL +E G T ++R + P Y +++ +AGR +
Sbjct: 312 LKGY----SCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDAL 367
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+L+ + K V + YN V+ C ++RA + EM ++ + T +I G
Sbjct: 368 SFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGL 427
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN- 359
CK V + ++ + E G P T+N++ID R R E+A +M E G P+
Sbjct: 428 CKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSL 486
Query: 360 ----TITYNI---------LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
T+ N L+ +C G V ++ +L + + + PD+ T+N LI C
Sbjct: 487 FLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLC 546
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ ++ A + F + G+ PD +Y LI L+++ R ++A F ++ Q+G +P
Sbjct: 547 KARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLS 606
Query: 467 TSNLILETLVQQGRFEEA 484
N ++ +L + + +A
Sbjct: 607 IYNSMMRSLCRMKKLSQA 624
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 184/436 (42%), Gaps = 13/436 (2%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
G + + L+ +A R A+ + M E P +++ + A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
L R + + N L+ L MA +A + +M DRG +P + ++
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
L ++E +L + +G P TY + L K GR E + L +
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
+ Y+ +ID + D + M +R+I+P++V + +I G + + L
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
++ + GF PD F +N+++ LC E A SEM++ + ++ T I+I LC G
Sbjct: 372 VMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRG 431
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM-----------LT 423
V ++++F +M P + T+NALI F R ++E+A F M LT
Sbjct: 432 LVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLT 491
Query: 424 LGLRP--DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
LG D+ S L+ + +SG+ +A + S+ +G PD T N ++ L +
Sbjct: 492 LGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNL 551
Query: 482 EEAHDIVKTSKERGIS 497
+ A + K + +GIS
Sbjct: 552 DGAVRLFKELQLKGIS 567
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 155/374 (41%), Gaps = 35/374 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T YN V+ L ++ A+ +M + D T I+I G+C+ G+VDEA
Sbjct: 377 GFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEA 436
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ +M G P V TY LIDGF R+ E + M+ N N + L G
Sbjct: 437 MQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGN---NPSLFLRLTLG 493
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D E L + L++ + + +A +LR + D G +P+
Sbjct: 494 ANQVCDS-------------ESLRK------LVHDMCQSGQVLKAYKLLRSIIDSGVVPD 534
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L +L+ + +G+ P TY L++ L +A R+ +
Sbjct: 535 VVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQ 594
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF----NTLISGH 300
++ + +++ YN ++ C++ + +A + D P F L + H
Sbjct: 595 NILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWL-----DYLPKKYNFPVESEVLANAH 649
Query: 301 --CKDAEVHK-TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
+D + REL+ + E G+ + + LC+ R +DAL + E+G+
Sbjct: 650 KEIEDGSLDDGVRELIKIDQEYGYISSN-PYTIWLIGLCQVRRTDDALRIFHTLQEFGID 708
Query: 358 PNTITYNILIRSLC 371
+LI LC
Sbjct: 709 ITPACCALLINYLC 722
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 211/438 (48%), Gaps = 13/438 (2%)
Query: 13 YNAVIDALVKSNSI-DLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
+N+++ AL + + +A + +PD TY IL++G+C+ G V +ALR++ M
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGM 198
Query: 72 --EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEI-MKERNVCP-NEATVRSLVHGVFR 127
+ L P+V T ++DG C + RV E +E M + CP N T L+ R
Sbjct: 199 SRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCR 258
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A+EL + ME E + Q +V NT++ L A R+ R PE
Sbjct: 259 VGNISMAYEL-VEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPEGK 315
Query: 187 TFDYTVTCLVTGLDLNETCGI-LDTF---IKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
T + LV L G+ ++ F + G P Y ++ L +AGR +
Sbjct: 316 GNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSM 375
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + + + +YN++I FC+ + A E+ +EM++ I P++ T+NTL+SG CK
Sbjct: 376 ASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCK 435
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ ELL +++ G +P TF +++ C+ + ++AL L M E G+ PN +
Sbjct: 436 AGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVI 495
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN LI LC GDV ++ LF +M+ + ++ TFNAL++ N EKA + M
Sbjct: 496 YNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMR 555
Query: 423 TLGLRPDNFSYSALIKAL 440
PD + L++ L
Sbjct: 556 EERCFPDYVTVDVLMEWL 573
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 220/501 (43%), Gaps = 56/501 (11%)
Query: 8 PSTRLYNAVIDALVK--SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
PS L +A++ L+ S+ A ++ PD F +N ++ + R+ V
Sbjct: 97 PSAPLLSAILSKLLARFSSPEPAARFLAASLAAGAPAPDVFAFNSILAALARVRDVPGMA 156
Query: 66 RLVKQMEGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN--VCPNEATVRSLV 122
R+ M+G P+V TY IL++G C A RV + RVL+ M ++ + P+ T+ ++V
Sbjct: 157 RIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVV 216
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY--------RLSNNSMASEAAAILR 174
G+ + + E L +R NT+ Y R+ N SMA E ++
Sbjct: 217 DGLCKS---GRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYE---LVE 270
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGL-DLNETCGILDTF-IKRGVKPRFSTYLLLMEALYK 232
KM + G +P++ T+ +V GL T L+ F KR V P
Sbjct: 271 KMENEG-VPQNIV---TLNTIVGGLCRAGRTGAALEFFREKRTVWP-------------- 312
Query: 233 AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
EG N +Y+ ++ N + A E+ E +P+ +
Sbjct: 313 -----EGK------------GNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIM 355
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+ T+ISG + + + + E GFK D +N +I CR R +A + L EM
Sbjct: 356 YFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMK 415
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
E G+ P+ TYN L+ C GD A L KM D P + TF L+ +C++ KI+
Sbjct: 416 EVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKID 475
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
+A + SM G+ P+N Y+ LI L K G D A + F M++ + T N +L
Sbjct: 476 EALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALL 535
Query: 473 ETLVQQGRFEEAHDIVKTSKE 493
+ L + E+A +++ +E
Sbjct: 536 KGLRDKNMPEKAFELMDQMRE 556
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 168/377 (44%), Gaps = 10/377 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSID--LAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
L I P N V+D L KS + LA+++ + SV C P+ TYN LI CR+G +
Sbjct: 203 LDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNI 262
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE-RNVCP----NEA 116
A LV++ME G N+ T ++ G C A R LE +E R V P N
Sbjct: 263 SMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAA---LEFFREKRTVWPEGKGNAV 319
Query: 117 TVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
T +LV + + A EL M ++ T++ L+ +A ++ M
Sbjct: 320 TYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSM 379
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
+ G+ ++ ++ + L+E +L + G++P TY L+ KAG
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDF 439
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
D L + D +V ++ ++ +CKV +D A I R M + I PN V +NTL
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
I CK +V EL + E + TFN+++ L + E A + + +M E
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERC 559
Query: 357 PPNTITYNILIRSLCAI 373
P+ +T ++L+ L I
Sbjct: 560 FPDYVTVDVLMEWLPVI 576
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 150/355 (42%), Gaps = 41/355 (11%)
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRG--VKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T+ V L + + +LD ++ ++P T +++ L K+GR E
Sbjct: 170 PDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL 229
Query: 241 RYLNHVFKD--RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
++ N +YN +ID FC+V + A E+ +M + + N+VT NT++
Sbjct: 230 AFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVG 289
Query: 299 GHCKDAE-------------------------------------VHKTRELLVMLLECGF 321
G C+ V EL + G
Sbjct: 290 GLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGH 349
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
PD + +MI L +A R EDA S M E G +T YNILI C + +
Sbjct: 350 SPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYE 409
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
L Q+M+ I PD+ T+N L+ C+ ++ M+ G +P ++ L+
Sbjct: 410 LLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYC 469
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
K G+ DEA + SM+++G +P++ N +++ L ++G + A ++ KE+ +
Sbjct: 470 KVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSV 524
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 128/521 (24%), Positives = 223/521 (42%), Gaps = 71/521 (13%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y++++ +L K + LAY+ +++M D Y +++ +C+ G + A + ++
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVHGVFRCLDP 131
+G+ + + T L+ GFC + + +V ++M + C PN + L+HG
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHG------- 275
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
L EA + +MG++G P + T+
Sbjct: 276 ----------------------------LCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ L +++ + D I RG KP TY +L++ L + G+ E + + KDR+
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+V +YN +I+ +CK + A E+ M R PN+ TFN L+ G C+ + +K
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
LL +L+ G PD ++N +ID LCR A LS M + + P+ +T+ +I + C
Sbjct: 428 LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC 487
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA----------------- 414
G + M IS D T LI C++ K A
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPH 547
Query: 415 --------------EKAFFSML----TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
K +ML LGL P +Y+ L+ LI+SG + + M
Sbjct: 548 SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM 607
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ +GC P+ Y +I+ L Q GR EEA ++ ++ G+S
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 230/493 (46%), Gaps = 19/493 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PSTR Y +I AL ID A+ F +M CKP+ TY +LI G+CR G ++EA
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++M P+V TY LI+G+C RV F +L +M++R PN T L+ G
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R P+KA LL R ++ + N L+ L + A +L M P+
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPD 475
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + + L +++G+ T L++ + K G+ + L
Sbjct: 476 CLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILE 535
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K R+++ +S N+++D K + + ++ + P++VT+ TL+ G +
Sbjct: 536 TLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG 595
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + +L ++ G P+ + + +I+ LC+ R E+A LS M + GV PN +TY
Sbjct: 596 DITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYT 655
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK-IEKAEKAFFSMLT 423
++++ G + R+L + M + +++L+Q F K I+ +E++ S +
Sbjct: 656 VMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIA 715
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
L D + LI + + G GC S ++ L ++GR +E
Sbjct: 716 L-RETDPECINELISVVEQLG---------------GC--ISGLCIFLVTRLCKEGRTDE 757
Query: 484 AHDIVKTSKERGI 496
++D+V+ ERG+
Sbjct: 758 SNDLVQNVLERGV 770
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 117/250 (46%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
N SY+++I C+V ++ A + +M ++ P+ T+ LI C + K L
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++ G KP+ T+ +ID LCR + E+A +MV+ + P+ ITYN LI C
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKD 384
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G V + L M+ P++ TFN L++ CR+ K KA ML GL PD SY
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ LI L + G + A + SM PD T I+ +QG+ + A +
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 494 RGISFKSFPG 503
+GIS G
Sbjct: 505 KGISLDEVTG 514
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 103/472 (21%), Positives = 210/472 (44%), Gaps = 25/472 (5%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I PS YNA+I+ K + A+ M CKP+ T+N L+ G+CR+G +A+
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAV 426
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L+K+M G +P++ +Y +LIDG C + +++L M ++ P+ T ++++
Sbjct: 427 HLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAF 486
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ A L + + ++ TL+ + +A IL + L
Sbjct: 487 CKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTP 546
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD-RYLN 244
+ + + L G + E +L K G+ P TY L++ L ++G D+ G R L
Sbjct: 547 HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG-DITGSFRILE 605
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + NV Y ++I+ C+ ++ A ++ M+D ++PN VT+ ++ G+ +
Sbjct: 606 LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED----------AL-----DCLS 349
++ + E + ++E G++ + ++S++ + + D AL +C++
Sbjct: 666 KLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECIN 725
Query: 350 EMVE-----WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
E++ G + L+ LC G S L Q + + + + +++S
Sbjct: 726 ELISVVEQLGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVFLE-KAMDIIMES 782
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
+C K K + +L G P S+ +I+ L K G + A++ + +
Sbjct: 783 YCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMEL 834
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 22/262 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I+ LG+ PS Y ++D L++S I ++ + M + C P+ + Y I+I+G+C+ G
Sbjct: 572 INKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGR 631
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V+EA +L+ M+ G +PN TYT+++ G+ N ++ + M ER N+ S
Sbjct: 632 VEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSS 691
Query: 121 LVHG-------------------VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
L+ G R DP E LI +E+ +C L+ RL
Sbjct: 692 LLQGFVLSQKGIDNSEESTVSDIALRETDPECINE-LISVVEQLGGCISGLCIFLVTRLC 750
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
E+ +++ + +RG E + D + + + ++ +K G P F
Sbjct: 751 KEGRTDESNDLVQNVLERGVFLEKA-MDIIMESYCSKKKHTKCMELITLVLKSGFVPSFK 809
Query: 222 TYLLLMEALYKAGRDVEGDRYL 243
++ L+++ L K G D E R L
Sbjct: 810 SFCLVIQGLKKEG-DAERAREL 830
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 147/342 (42%), Gaps = 26/342 (7%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N ++D L K + +++ P TY L+ G+ R G + + R+++ M+
Sbjct: 550 NVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKL 609
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G PNVY YTI+I+G C RV E ++L M++ V PN T +V G +
Sbjct: 610 SGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDR 669
Query: 134 AFELLIRFMEREPLTQKLVCNTLL--YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
A E + +ER + ++LL + LS + + + + + R PE
Sbjct: 670 ALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPEC------ 723
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+NE +++ G +L+ L K GR E + + +V +R
Sbjct: 724 ---------INELISVVEQL--GGCISGLCIFLV--TRLCKEGRTDESNDLVQNVL-ERG 769
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
V + +++++ +C + E+ + P+ +F +I G K+ + + RE
Sbjct: 770 VFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARE 829
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
L++ LL +K + ++CL ++ DC SE+++
Sbjct: 830 LVMELLTSNGVVEKSGVLTYVECLMEG---DETGDC-SEVID 867
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 234/485 (48%), Gaps = 12/485 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQM----SVDQCKPDRFTYNILIHGICRIGVVDE 63
PST N++++ LVK I+ A+ + +M + D D +T +I++ G+C G +++
Sbjct: 167 PSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIED 226
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
++L++ G G PN+ Y LIDG+C V +++ + +K + P T SLV+
Sbjct: 227 GIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVN 286
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKL-VCNTLL---YRLSNNSMASEAAAILRKMGDR 179
G F + +A +LL+ M+ L+ + + N ++ Y+L + A + L++M +
Sbjct: 287 G-FCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDT---LKEMSEN 342
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
P+ T++ + + ++ E +L+ I+RG+ P TY L+ K G +
Sbjct: 343 CCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKA 402
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
YL + L ++ SY +I +D A I M +R I P+ +N L++G
Sbjct: 403 TDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNG 462
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
K ++ + +L +L+ PD F + +++D R ++A ++E G+ P
Sbjct: 463 LFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPG 522
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+ YN++I+ G + ++ KM+ PDI+TF+ +I + + + + K F
Sbjct: 523 VVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFG 582
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M+ +P+ +Y++LI + G A++ F M +G P T ++++ + ++
Sbjct: 583 LMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEA 642
Query: 480 RFEEA 484
+ +A
Sbjct: 643 KLGKA 647
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 204/461 (44%), Gaps = 6/461 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN +ID K ++ AY F+++ + P T+ L++G C++G+ +
Sbjct: 238 GCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAI 297
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M+ G + NV Y +ID + L+ M E P+ T +L++
Sbjct: 298 DLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINH 357
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +LL + + R KL L++ ++A L +M G +
Sbjct: 358 FCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVD 417
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + LV +++ I D + RG+ P + Y +LM L+K G+ L
Sbjct: 418 MISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLT 477
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + Y ++D F + +D A ++ + + ++ + P +V +N +I G K
Sbjct: 478 EMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSG 537
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + PD FTF+++ID + H L MV+ PN +TY
Sbjct: 538 MMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYT 597
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C G+ + +LF M++ + P + T++ LI SFC+ K+ KA F ML
Sbjct: 598 SLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLIN 657
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
P++ ++ L+ F K T +S E N + +S
Sbjct: 658 KCTPNDAAFHYLVNG------FTNTKATAVSREPNNLHENS 692
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 208/454 (45%), Gaps = 11/454 (2%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYA-PNVYTYTILIDGFC 91
++M + P R + ++ +G+VD+AL + + L + P+ Y L++
Sbjct: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180
Query: 92 NAKRVAEVFRVLEIMKER----NVCPNEATVRSLVHGVFRCLDP--HKAFELLIRFMERE 145
+R+ ++ + M +R ++C + T +V G+ CL +L+ +
Sbjct: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGL--CLKGRIEDGIKLIESRWGKG 238
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
+ + NTL+ A + +K+ +G++P TF V + + E
Sbjct: 239 CVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCK-MGMFEAI 297
Query: 206 GILDTFIK-RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
+L +K RG+ Y +++A YK G D++ L + ++ ++ +YN +I+
Sbjct: 298 DLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINH 357
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
FC ++ A ++ + R +APN +T+ L+ G+CK E K + L+ + G + D
Sbjct: 358 FCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVD 417
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
++ ++I L A + AL M+ G+ P+ YN+L+ L G ++ + +
Sbjct: 418 MISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLT 477
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+M I+PD + + L+ F R +++A+K F ++ GL P Y+ +IK KSG
Sbjct: 478 EMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSG 537
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
D A M + PD +T + I++ V+Q
Sbjct: 538 MMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQ 571
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 177/414 (42%), Gaps = 13/414 (3%)
Query: 98 EVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFEL---LIRFMEREPLTQKLVCN 154
E+ LE MK + P + ++ KA E+ +++ P T CN
Sbjct: 116 EIEFTLEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPST--YACN 173
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN----ETCGILDT 210
+LL L + A + +M DR + +YT + +V GL L + ++++
Sbjct: 174 SLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIES 233
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
+G P Y L++ K G + + + + ++ +++ FCK+ M
Sbjct: 234 RWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGM 293
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+ + EM+DR ++ N+ +N +I K K ++ L + E +PD T+N+
Sbjct: 294 FEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNT 353
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I+ C E+A L + + G+ PN +TY L+ C G+ ++ +M
Sbjct: 354 LINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSG 413
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ D+ ++ ALI +++ A M+ G+ PD Y+ L+ L K G+ AK
Sbjct: 414 LEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAK 473
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFPGL 504
M PD++ +++ ++ G +EA + + E+G+ PG+
Sbjct: 474 VMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLD----PGV 523
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 173/462 (37%), Gaps = 64/462 (13%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y A+I LV + +D A +M PD YN+L++G+ + G + A ++ +M
Sbjct: 421 YGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEML 480
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
AP+ + Y L+DGF + E ++ +++ E+ + P ++ G
Sbjct: 481 DQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKG-------- 532
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
S + M A + KM ++P+ TF +
Sbjct: 533 ---------------------------FSKSGMMDNAILCIDKMRRAHHVPDIFTFSTII 565
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
V ++N I +K+ KP TY L+ + G ++ + + L
Sbjct: 566 DGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLK 625
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+V +Y+++I FCK + +A M PN F+ L++G +RE
Sbjct: 626 PSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSRE- 684
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
P+ NS FED S M+ G YN ++ LC
Sbjct: 685 ----------PNNLHENS-------RSMFEDF---FSRMIGDGWTQKAAAYNCILICLCQ 724
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
V +L+L KM A + D +F ALI C +E K + +M++ L
Sbjct: 725 QRMVKTALQLRNKMLAFGLCSDAVSFVALIHGIC----LEGNSKEWRNMISCDLNEGELQ 780
Query: 433 ----YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
YS + I G EA +M + +P+ +NL
Sbjct: 781 IALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNL 822
>gi|302798519|ref|XP_002981019.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
gi|300151073|gb|EFJ17720.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
Length = 448
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 213/448 (47%), Gaps = 11/448 (2%)
Query: 39 DQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE 98
D PDR +YN+L+ G+ ++ VD+A ++ M G GY P+V T +L+D FC KRV E
Sbjct: 4 DGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGE 63
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
V + + ++ V +++ + D F+ + L L T+L
Sbjct: 64 VCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLD 123
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
L EA+ ++ +M + +P+ T+ ++ L ++ + D +++ + P
Sbjct: 124 CLIKTGKTREASEVVGEMIKKS-VPDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVP 182
Query: 219 RFSTYLLLMEALYKAGRDVEGD-RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
Y L+ A + R ++G R + + + ++Y +++ C C A +I
Sbjct: 183 NVDVYTSLLAAHCRT-RKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDI 241
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP--DKFTFNSMIDCL 335
MR R P+ T+ +LI G C + + + L +LE G K D +N +I+ L
Sbjct: 242 HSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLE-GEKAQLDAGIYNVLIEGL 300
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
CRA + E+AL+ + MV+ G P TYN LI +V ++L+LF+ M+ SP+
Sbjct: 301 CRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNT 360
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
++ I C++ KI +A + F + G PDN +Y+ALI+ L + R DEA + +
Sbjct: 361 MIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYRE 420
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEE 483
M + G Y ++ L TL Q EE
Sbjct: 421 MGERG-----YIADRSLRTLAFQRSREE 443
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 174/426 (40%), Gaps = 37/426 (8%)
Query: 106 MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSM 165
M E V P+ + LV G+ + +A +L + + C L+ +
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60
Query: 166 ASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLL 225
E + +++ G ++ + L+ D + D + G P Y
Sbjct: 61 VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120
Query: 226 LMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
+++ L K G+ E + + K + V + +Y +I CK N D A ++ M +++
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIK-KSVPDGMTYTALISVLCKHNRADDAMKVFDIMVEKE 179
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
I PN+ + +L++ HC+ ++ L V +++ G+ P T+ ++ CLC R A
Sbjct: 180 IVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAY 239
Query: 346 DCLSEMVEWGVPPNTITY------------------------------------NILIRS 369
D S M G P+ TY N+LI
Sbjct: 240 DIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEG 299
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
LC V +L + M P + T+NALI F + N+++KA + F +M G P+
Sbjct: 300 LCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPN 359
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
YS I L K G+ +EA + F + GC PD+ T N ++ L R +EAH + +
Sbjct: 360 TMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYR 419
Query: 490 TSKERG 495
ERG
Sbjct: 420 EMGERG 425
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 178/421 (42%), Gaps = 43/421 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN ++ L K +S+D A M + PD T +L+ C + V E
Sbjct: 5 GVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEV 64
Query: 65 LRLVKQME-----------------------------------GLGYAPNVYTYTILIDG 89
L +++E G G P+V Y ++D
Sbjct: 65 CELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDC 124
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF---RCLDPHKAFELLIRFMEREP 146
+ E V+ M +++V P+ T +L+ + R D K F++++ E+E
Sbjct: 125 LIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMV---EKEI 180
Query: 147 LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
+ V +LL A + +M RGY P +ST+ + CL G
Sbjct: 181 VPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYD 240
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK-DRLVSNVNSYNMVIDCF 265
I + RG P +TY L+ AGR E V + ++ + YN++I+
Sbjct: 241 IHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGL 300
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C+ + ++ A E+ M D+ P L T+N LI G K EV K +L + E GF P+
Sbjct: 301 CRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNT 360
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
+++ ID LC+ + +A + + VE G P+ +TYN LIR L + + RL+++
Sbjct: 361 MIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYRE 420
Query: 386 M 386
M
Sbjct: 421 M 421
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 153/346 (44%), Gaps = 4/346 (1%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
N L+ L+ S +A A+L M GY P+ T V + E C +
Sbjct: 14 NLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVCELFQELES 73
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
GV Y +++AL +G G ++ + D + +V +Y ++DC K
Sbjct: 74 NGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIKTGKTRE 133
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A+E+ EM + + P+ +T+ LIS CK ++ +++E P+ + S++
Sbjct: 134 ASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNVDVYTSLLA 192
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
CR + + A EM++ G P+ TY +L+R LC G + + M++ P
Sbjct: 193 AHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVP 252
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP--DNFSYSALIKALIKSGRFDEAKQ 451
D T+ +LI C +I +A K F + G + D Y+ LI+ L ++ + +EA +
Sbjct: 253 DENTYASLIYGCCMAGRITEA-KVLFKEVLEGEKAQLDAGIYNVLIEGLCRASKVEEALE 311
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M GC P T N ++ + ++A + + +E+G S
Sbjct: 312 VTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFS 357
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 114/278 (41%), Gaps = 1/278 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P Y A+I L K N D A F M + P+ Y L+ CR +D A RL
Sbjct: 147 PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNVDVYTSLLAAHCRTRKLDGAYRL 206
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+M GY P+ TY +L+ CN R + + M+ R P+E T SL++G
Sbjct: 207 FVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCM 266
Query: 128 CLDPHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+A L +E E + N L+ L S EA + M D+G +P
Sbjct: 267 AGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQ 326
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + ++++ + ++G P Y ++ L K G+ E +
Sbjct: 327 TYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQS 386
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
+ V + +YN +I N MD A + REM +R
Sbjct: 387 VERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGER 424
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 35/175 (20%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
+YN +I+ L +++ ++ A M C P TYN LI G + VD+AL+L + M
Sbjct: 292 IYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAM 351
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
E G++PN Y+ IDG C ++ E + ER P+ T +L+ G+F
Sbjct: 352 EEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLF----- 406
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
N M EA + R+MG+RGY+ + S
Sbjct: 407 -----------------------------GANRM-DEAHRLYREMGERGYIADRS 431
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ + YNA+I K+N +D A F+ M P+ Y+ I G+C++G ++EA
Sbjct: 320 GCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINEA 379
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
+Q G P+ TY LI G A R+ E R+ M ER
Sbjct: 380 HEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERG 425
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP+T +Y+ ID L K I+ A+ FQQ C PD TYN LI G+ +DEA
Sbjct: 355 GFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEA 414
Query: 65 LRLVKQMEGLGY 76
RL ++M GY
Sbjct: 415 HRLYREMGERGY 426
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
ML G+ PD SY+ L++ L K D+A+ +M G +PD T L+++ + R
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60
Query: 481 FEEAHDIVKTSKERGIS 497
E ++ + + G++
Sbjct: 61 VGEVCELFQELESNGVA 77
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 200/428 (46%), Gaps = 37/428 (8%)
Query: 34 QQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNA 93
Q+M + D +++ ILIH CR + AL ++ +M LGY P++ T+ L+ GFC
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 94 KRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC 153
R+ + F ++ +M + PN +L+ G+ + + + A ELL ME++ L +V
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNE-MEKKGLGADVVT 213
Query: 154 -NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
NTLL L + S+AA +LR M +
Sbjct: 214 YNTLLTGLCYSGRWSDAARMLRDM-----------------------------------M 238
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
KR + P T+ L++ K G E + + + N +YN +I+ C +
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + M + PN+VT+NTLISG CK V + +L + GF D FT+N++I
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
C+ + ALD MV V P+ IT+ IL+ LC G++ +L F M+
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
I +N +I C+ +K+EKA + F + G++PD +Y+ +I L K+G EA +
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478
Query: 453 FLSMEQNG 460
M++ G
Sbjct: 479 IRRMKEEG 486
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 202/468 (43%), Gaps = 35/468 (7%)
Query: 29 AYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILID 88
A+ F +M Q P + L+ + + + ++ME G + ++Y++TILI
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
FC R++ VL M + P+ T SL+HG AF L+I
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL-------- 166
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
M GY P ++ + L +LN +L
Sbjct: 167 ---------------------------MVKSGYEPNVVVYNTLIDGLCKNGELNIALELL 199
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ K+G+ TY L+ L +GR + R L + K + +V ++ +ID F K
Sbjct: 200 NEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQ 259
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+D A E+ +EM + PN VT+N++I+G C ++ ++ ++ G P+ T+
Sbjct: 260 GNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTY 319
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N++I C+ ++ + M G + TYN LI C +G + +L +F M +
Sbjct: 320 NTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
R++PDI T L+ C +IE A F M +Y+ +I L K+ + ++
Sbjct: 380 RRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEK 439
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
A + F + G PD+ T +++ L + G EA ++++ KE GI
Sbjct: 440 AWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 161/388 (41%), Gaps = 35/388 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG PS + +++ N I A+ M +P+ YN LI G+C+ G ++
Sbjct: 135 LGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNI 194
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L+ +ME G +V TY L+ G C + R ++ R+L M +R++ P+ T +L+
Sbjct: 195 ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALID 254
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
F+++ L EA + ++M P
Sbjct: 255 ----------------VFVKQGNL-------------------DEAQELYKEMIQSSVDP 279
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + L L + D +G P TY L+ K EG +
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +++ +YN +I +C+V + A +I M R + P+++T L+ G C +
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E+ + E +N MI LC+A + E A + + GV P+ TY
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRI 391
I+I LC G + L ++M+ + I
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P F ++ R+E + +M +G+ + ++ ILI C ++ +L +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
KM P I TF +L+ FC +N+I A M+ G P+ Y+ LI L K
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+G + A + ME+ G D T N +L L GR+ +A +++ +R I+
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN 243
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 105/252 (41%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P + A+ID VK ++D A +++M P+ TYN +I+G+C G + +A
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK 301
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M G PNV TY LI GFC + V E ++ + M + T +L+HG
Sbjct: 302 KTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGY 361
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ A ++ + R + LL+ L N A M +
Sbjct: 362 CQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGI 421
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
++ + L + + + GVKP TY +++ L K G E D +
Sbjct: 422 VAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRR 481
Query: 246 VFKDRLVSNVNS 257
+ ++ ++ +N+
Sbjct: 482 MKEEGIICQMNA 493
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 78/185 (42%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN +I K +D FQ+MS + D FTYN LIHG C++G + A
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVA 370
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + M P++ T+ IL+ G C + + M+E ++HG
Sbjct: 371 LDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHG 430
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + KA+EL R ++ L N EA ++R+M + G + +
Sbjct: 431 LCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQ 490
Query: 185 SSTFD 189
+ D
Sbjct: 491 MNAED 495
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
RFEDA EMV P+ + + L+ + + + QKM+ IS D+Y+F
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI FCR +++ A M+ LG P ++ +L+ R +A + M ++
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G P+ N +++ L + G A +++ +++G+
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLG 208
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 222/487 (45%), Gaps = 35/487 (7%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y+ V+ +L K+ + A F+ M + C P TYN+LI+ C G +AL L + M+
Sbjct: 13 YDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMK 72
Query: 73 GLG-YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
P+ +TY LI G C++ ++L M+++N+ N T S++ + + P
Sbjct: 73 REKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKP 132
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
+++++L M N ++ + ++ +A + + M + GY P++ ++
Sbjct: 133 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 192
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ L L+E+ IL A+ AG
Sbjct: 193 IHGLAKIGKLDESLKILSEM-----------------AMRAAG----------------Y 219
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
V NV +++ +I C+ +++A E+ M + PN T+ TLI+G C+ +V + RE
Sbjct: 220 VPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARE 279
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW-GVPPNTITYNILIRSL 370
L + + PD +NS+I C+ ++A EM G+ P +T+N LI
Sbjct: 280 LFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGF 339
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C +G + R+ L +M ++ D T+ LI R K+++A + + M D
Sbjct: 340 CKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDP 399
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
S + + L K+G D+A F + ++G P+ T ++ E+L++ GR E+A +++
Sbjct: 400 VSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEP 459
Query: 491 SKERGIS 497
+K R I+
Sbjct: 460 AKARDIT 466
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 129/243 (53%), Gaps = 3/243 (1%)
Query: 256 NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL-V 314
++Y+ V+ K M+ +A E+ M+ P+LVT+N LI+ C E K +L
Sbjct: 11 DAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQS 70
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
M E +PD++T+N++I LC + E A LSEM + + N TY+ +I+SL
Sbjct: 71 MKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEA 130
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
S ++ ++M A +PD++ FN ++Q F R N +EKA + + M+ G +PDN SY
Sbjct: 131 KPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYH 190
Query: 435 ALIKALIKSGRFDEAKQTF--LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
LI L K G+ DE+ + ++M G P+ T + ++ L + G E+A ++ +
Sbjct: 191 ILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSML 250
Query: 493 ERG 495
E G
Sbjct: 251 EAG 253
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 183/412 (44%), Gaps = 34/412 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P YN +I L S + + A +M + FTY+ +I + + +E+
Sbjct: 77 VEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESY 136
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+++++M G P+V+ + ++ GF + + + V + M E P+ + L+HG+
Sbjct: 137 KVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGL 196
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ ++ ++L + MA AA GY+P
Sbjct: 197 AKIGKLDESLKIL------------------------SEMAMRAA---------GYVPNV 223
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
TF + L +L + + + ++ G KP TY L+ L +A + ++
Sbjct: 224 ITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEK 283
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR-DRDIAPNLVTFNTLISGHCKDA 304
+ + + + +YN +I +CK MD A ++ REM + P +VTFNTLI G CK
Sbjct: 284 MTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLG 343
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + EL+ + G D T+ +I L RA + ++AL+ +M E + ++
Sbjct: 344 KLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCV 403
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
+ LC G++ ++ +F+ + P+ TF L +S ++ ++E A+K
Sbjct: 404 SFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQK 455
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 149/343 (43%), Gaps = 38/343 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P +N V+ +SN+++ A +Q M KPD +Y+ILIHG+ +IG +DE+
Sbjct: 146 GCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDES 205
Query: 65 LRLVKQ--MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
L+++ + M GY PNV T++ LI G C + + V M E PN+ T +L+
Sbjct: 206 LKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLI 265
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDRGY 181
G+ R +A EL + + + N+L+ EA + R+M G G
Sbjct: 266 AGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGL 325
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P TF+ ++D F K G K GR +
Sbjct: 326 QPTIVTFNT----------------LIDGFCKLG----------------KLGR---ANE 350
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + L ++ +Y ++I + +D A E+ ++MR++ + V+ + + G C
Sbjct: 351 LVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLC 410
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
K + + + + G P+ TF + + L + R EDA
Sbjct: 411 KTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDA 453
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++ T Y +I L ++ +D A ++QM + D + + G+C+ G +D+A
Sbjct: 359 GLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQA 418
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNV 111
+ + G PN T+ IL + RV + +++E K R++
Sbjct: 419 YAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDI 465
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 127/453 (28%), Positives = 208/453 (45%), Gaps = 12/453 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P T +N ++DAL ++ + F M +P+ TY IL+ G+C+ G V +AL +
Sbjct: 135 PDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSV 194
Query: 68 VKQMEGL--GYAPNVYTYTILIDGFCNAKRVAEVFR-VLEIMKERNVC-PNEATVRSLVH 123
+ M G P+V ++DG C R+ + + V E M+ + C PN T L H
Sbjct: 195 LDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAH 254
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
R + A EL+ + ME+E +T V NT++ L A R+ R
Sbjct: 255 AFCRAGNVGMACELVAK-MEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFRE--KRTVW 311
Query: 183 PESSTFDYTVTCLVTGLDLNETCGI----LDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
PE+ T + LV G+ + G P Y ++ L +AGR +
Sbjct: 312 PEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDD 371
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ K + +YN++I FC+ ++ A E+ EM++ + P++ T+NTL+S
Sbjct: 372 AWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLS 431
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G CK + ELL +++ G +P TF ++I C+ + ++AL M E G+ P
Sbjct: 432 GLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQP 491
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
NT+ YN LI LC D + ++ LF +M+ + ++ TFNAL++ N EKA +
Sbjct: 492 NTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELM 551
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
M PD + L++ L G D K
Sbjct: 552 DLMREGRCTPDYVTIDILMEWLPVIGETDRLKH 584
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 123/494 (24%), Positives = 211/494 (42%), Gaps = 42/494 (8%)
Query: 8 PSTRLYNAVIDALVK---SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
PS R+ +A++ ++ S+S D A ++ PD +N L+ + + G +
Sbjct: 97 PSPRILSALLYKILSRSPSSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGM 156
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK--ERNVCPNEATVRSLV 122
+L M PNV TY IL+ G C A RV + VL+ M E +VCP+ + ++V
Sbjct: 157 TQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIV 216
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + +A ++F+E R G
Sbjct: 217 DGLCKTGRLQQA----VKFVEE-----------------------------RMRSVHGCA 243
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR---DVEG 239
P + T++ ++ C ++ K V P T ++ L GR +E
Sbjct: 244 PNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEF 303
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
R V+ + N +Y+ ++ F N + A E+ EM D +P+ + + T+ISG
Sbjct: 304 FREKRTVWPEAR-GNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISG 362
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ + + + + GF+ D +N +I CR R +A + L EM E G+ P+
Sbjct: 363 LTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPD 422
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
TYN L+ LC GD L KM P + TF LI +C++ +I++A + F
Sbjct: 423 VYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFR 482
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
SM G++P+ Y+ LI L KS A + F M + + T N +L+ L +
Sbjct: 483 SMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKN 542
Query: 480 RFEEAHDIVKTSKE 493
E+A +++ +E
Sbjct: 543 MPEKAFELMDLMRE 556
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 171/391 (43%), Gaps = 13/391 (3%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLA--YLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ P + N ++D L K+ + A +++ + SV C P+ TYN L H CR G V
Sbjct: 205 VCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGM 264
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE-RNVCP----NEATV 118
A LV +ME PN T ++ G C RV LE +E R V P N T
Sbjct: 265 ACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAA---LEFFREKRTVWPEARGNAVTY 321
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
+LV + A EL ++ ++ T++ L+ +A ++ M
Sbjct: 322 STLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKK 381
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G+ ++ ++ + LNE +L + G++P TY L+ L KAG +
Sbjct: 382 AGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLA 441
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
D L + +V ++ +I +CKV +D A I R M + I PN V +NTLI
Sbjct: 442 VDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLID 501
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
CK + EL + E + TFN+++ L + E A + + M E P
Sbjct: 502 FLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTP 561
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+ +T +IL+ L IG+ R L+ F MQ D
Sbjct: 562 DYVTIDILMEWLPVIGETDR-LKHF--MQHD 589
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 6/188 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG---VV 61
G + YN +I + ++ AY +M +PD +TYN L+ G+C+ G V
Sbjct: 383 GFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAV 442
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
DE L K ++G G P+V T+ LI G+C ++ E R+ M E + PN +L
Sbjct: 443 DELLG--KMIDG-GCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTL 499
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ + + D A EL E+ N LL L + +M +A ++ M +
Sbjct: 500 IDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRC 559
Query: 182 LPESSTFD 189
P+ T D
Sbjct: 560 TPDYVTID 567
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 108/245 (44%), Gaps = 8/245 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP +Y +I L ++ +D A+ M + D YNILI G CR ++EA
Sbjct: 348 GNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEA 407
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M+ G P+VYTY L+ G C A V +L M + P+ T +L+HG
Sbjct: 408 YELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHG 467
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A + E ++ NTL+ L + S A + +M ++ ++P
Sbjct: 468 YCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREK-HVPA 526
Query: 185 SSTFDYTVTCLVTGL---DLNETCGILDTFIKRG-VKPRFSTYLLLMEALYKAGRDVEGD 240
+ T T L+ GL ++ E L ++ G P + T +LME L G
Sbjct: 527 NVT---TFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETDRLK 583
Query: 241 RYLNH 245
++ H
Sbjct: 584 HFMQH 588
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/476 (24%), Positives = 223/476 (46%), Gaps = 3/476 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P + N I LV N +D A ++M + + +P+ TYN LI G C + +++A
Sbjct: 262 GIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDA 321
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE-IMKERNVCPNEATVRSLVH 123
+ L+ +M G +P+ +Y ++ C KR+ EV ++E ++K+ N+ P++ T + VH
Sbjct: 322 MELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVH 381
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +A E L ER K+ + +++ +A I+ +M +G +P
Sbjct: 382 MLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIP 441
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ + L +++ +L K G KP +Y L+ L K G +E +
Sbjct: 442 DVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMM 501
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N +D + N +Y++++ F + A ++ REM + P V N LI C++
Sbjct: 502 NMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQE 561
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V + + + L G + F ++I C+ E AL L +M P+ +TY
Sbjct: 562 EKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTY 621
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+I +L G + + +L KM + P T+ +I +CRM ++E K ML+
Sbjct: 622 TTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLS 681
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+ +Y+ +I+ L G ++A + + + D+ T ++++E+ + +G
Sbjct: 682 --RQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKG 735
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 201/445 (45%), Gaps = 40/445 (8%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
+PD N IH + +D+A+R +++M+ + PNV TY LI G+C+ R+ +
Sbjct: 264 EPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAME 323
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPH-KAFELLIRFMEREP--LTQKLVCNTLLY 158
++ M + P++ + +++ F C + K LL+ M ++ L ++ NT ++
Sbjct: 324 LIAEMPFKGCSPDKISYYTVMG--FLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVH 381
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
LS + EA LR+ +R + +
Sbjct: 382 MLSKHGHGDEALEFLREAEERRFRVDKVG------------------------------- 410
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
Y ++ + + GR + +N +F + +V +Y VI+ C+ +D+A ++
Sbjct: 411 ----YSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKML 466
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
R+M PN V++ L++G CK+ + RE++ M E + P+ T++ ++ R
Sbjct: 467 RQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRRE 526
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+ +A D + EM++ G P + N+LI+SLC V + R ++ + + ++ F
Sbjct: 527 GKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNF 586
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+I FC+ + +E A M PD +Y+ +I AL K GR +EA + + M +
Sbjct: 587 TTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLR 646
Query: 459 NGCNPDSYTSNLILETLVQQGRFEE 483
G P T ++ + GR E+
Sbjct: 647 VGLIPTPVTYRTVIHQYCRMGRVED 671
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 157/314 (50%), Gaps = 3/314 (0%)
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
PE+ F Y + L +L K G++P S + L R + R+
Sbjct: 232 PEA--FGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRF 289
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + + NV +YN +I +C ++ ++ A E+ EM + +P+ +++ T++ CK
Sbjct: 290 LERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCK 349
Query: 303 DAEVHKTRELL-VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ + + R L+ ML + PD+ T+N+ + L + ++AL+ L E E + +
Sbjct: 350 EKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKV 409
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y+ ++ S C G + ++ + +M + PD+ T+ ++I C+ K+++A+K M
Sbjct: 410 GYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 469
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G +P+ SY+AL+ L K+G EA++ E++ P++ T ++++ ++G+
Sbjct: 470 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKS 529
Query: 482 EEAHDIVKTSKERG 495
EA D+V+ ++G
Sbjct: 530 SEACDLVREMIKKG 543
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/445 (22%), Positives = 198/445 (44%), Gaps = 40/445 (8%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
+P+ F Y ++ + R G + A+R++ M+ G P++ I R+ + R
Sbjct: 231 RPEAFGYVMVSYS--RAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVR 288
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
LE M+ + PN T L+ G C+ L+RL
Sbjct: 289 FLERMQIVEIEPNVITYNCLIKGY---------------------------CD--LHRLE 319
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK-RGVKPRF 220
+ A ++ +M +G P+ ++ + L + E +++ +K + P
Sbjct: 320 D------AMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQ 373
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY + L K G E +L + R + Y+ ++ FC+ MD+A EI E
Sbjct: 374 VTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNE 433
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M + P++VT+ ++I+G C++ +V + +++L + + G KP+ ++ ++++ LC+
Sbjct: 434 MFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGN 493
Query: 341 FEDALDCLSEMVE-WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+A + ++ E W +P N ITY++L+ G + + L ++M P N
Sbjct: 494 SLEAREMMNMSEEDWWIP-NAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEIN 552
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LIQS C+ K+++A++ L G + +++ +I + + A M +
Sbjct: 553 LLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLS 612
Query: 460 GCNPDSYTSNLILETLVQQGRFEEA 484
+PD T I++ L ++GR EEA
Sbjct: 613 NKHPDVVTYTTIIDALGKKGRIEEA 637
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 184/426 (43%), Gaps = 18/426 (4%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN + L K D A ++ + + D+ Y+ ++H CR G +D+A +
Sbjct: 371 PDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEI 430
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
V +M G P+V TYT +I+G C ++V + ++L M + PN + +L++G+ +
Sbjct: 431 VNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCK 490
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ +A E++ E + + + L++ +SEA ++R+M +G+ P
Sbjct: 491 NGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVE 550
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL-----YKAGRDVEGDRY 242
+ + L ++E ++ + G + ++ +A + D Y
Sbjct: 551 INLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 610
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L++ D V +Y +ID K ++ AT++ +M + P VT+ T+I +C+
Sbjct: 611 LSNKHPD-----VVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCR 665
Query: 303 DAEVHKTRELLVMLL---ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
V +LL +L EC + +N +I+ LC E A L +++ +
Sbjct: 666 MGRVEDLLKLLEKMLSRQEC-----RTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKID 720
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
T ++LI S + G S + +M + PD+ + + K E+A+K
Sbjct: 721 ANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLIL 780
Query: 420 SMLTLG 425
+ G
Sbjct: 781 RFVERG 786
>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1025
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 137/532 (25%), Positives = 230/532 (43%), Gaps = 57/532 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI YN +ID L K AYL ++M PD +YN LIHG G ++ A
Sbjct: 294 GIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLA 353
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + QM P+V TYT LIDG+C R E RVL M+ V P E S
Sbjct: 354 IYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREV---SKAKQ 410
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLP 183
+ +C+ L + + + Y L N M +EA + M
Sbjct: 411 ILKCM-----------------LADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISF 453
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++F+ + ++ E + D ++ G P TY L+ L + G V+ ++
Sbjct: 454 DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM 513
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
++ + + + N ++ CK +D A ++C +M R+I P+ T+ L+ G CK
Sbjct: 514 VYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKR 573
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR-------AHRFEDAL-------DCLS 349
+V LL M+LE G PD + +++ L ++ F++ + DC++
Sbjct: 574 GKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIA 633
Query: 350 ----------------------EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
M E V P++ +YNIL+ G ++R+L L++ M
Sbjct: 634 YNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMV 693
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ I PD T+ LI C IE A K M+ G+ PDN ++ LIKA + +
Sbjct: 694 KEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMS 753
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
A Q F M+ +P S T ++ L+++ +++++I+ E G+ K
Sbjct: 754 NALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPK 805
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 229/486 (47%), Gaps = 25/486 (5%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCK-PDRFTYNILIHGICRIGVVDEALRLVKQME 72
N V+++L + A Q+M C+ P+ TYN +++ + G ALR++ ME
Sbjct: 234 NIVLNSLCTQGKLSKAESMLQKMK--NCRLPNAVTYNTILNWYVKKGRCKSALRILDDME 291
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G ++YTY I+ID C KR A + +L+ M+E N+ P+E + +L+HG F +
Sbjct: 292 KNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKIN 351
Query: 133 KAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
A + + M R+ L + T L+ N EA +L +M G P
Sbjct: 352 LAIYIFNQ-MLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPR------- 403
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
++++ IL + G+ P TY AL G E +++ ++ + ++
Sbjct: 404 --------EVSKAKQILKCMLADGIDPDVITY----SALINEGMIAEAEQFKQYMSRMKI 451
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+V S+N +ID +C+ + A + M P++ T+ +L+ G C+ + + +E
Sbjct: 452 SFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKE 511
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
+V LLE D+ T N+++ +C+ ++ALD +MV + P+T TY IL+ C
Sbjct: 512 FMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFC 571
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML-TLGLRPDN 430
G V +L L Q M + PD + L+ +++ A F ++ GL D
Sbjct: 572 KRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADC 631
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+Y++++ +K G+ +E ++ +M +N P S + N+++ +++G+ + +
Sbjct: 632 IAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRD 691
Query: 491 SKERGI 496
+ GI
Sbjct: 692 MVKEGI 697
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 227/493 (46%), Gaps = 1/493 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y +++ L + + A + C D T N L+ GIC+ G +DEA
Sbjct: 485 GWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEA 544
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L ++M P+ YTYTIL+DGFC +V +L++M E+ + P+ L++G
Sbjct: 545 LDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNG 604
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ A + + +E L + N+++ +E ++R M + P
Sbjct: 605 LVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYP 664
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
S++++ + + L+ T + +K G+KP TY LL+ L + G ++L
Sbjct: 665 SSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFL 724
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + + +++++I F + + M A ++ M+ ++P+ T+ +++G +
Sbjct: 725 EKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRK 784
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ ++ E+L ++E G +P + ++I+ CR + A + +M GV P+ +
Sbjct: 785 NWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAE 844
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+ ++R LC G V ++ +F + + P I TF L+ C+ KI+ A M +
Sbjct: 845 SSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMES 904
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL+ D +Y+ LI L +A + M+ G P+ T + + G ++
Sbjct: 905 CGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQD 964
Query: 484 AHDIVKTSKERGI 496
++K ++RGI
Sbjct: 965 GEKLLKDIEDRGI 977
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 186/427 (43%), Gaps = 7/427 (1%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P T Y ++D K + A + Q M PD Y L++G+ G V A
Sbjct: 556 ILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAAS 615
Query: 66 RLVKQM---EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+ +++ EGL YA + Y +++G+ ++ E+ R++ M E V P+ A+ L+
Sbjct: 616 YMFQEIICKEGL-YA-DCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILM 673
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL-YRLSNNSMASEAAAILRKMGDRGY 181
HG + + L R M +E + V LL + L + A L KM G
Sbjct: 674 HGYIKKGQLSRTL-YLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGV 732
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P++ FD + ++ + + P TY+ ++ L + +
Sbjct: 733 FPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYE 792
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L+ + + L Y +I+ C+V +D A E+ +M+ + P+ V ++++ G C
Sbjct: 793 ILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLC 852
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K +V + + ++ G P TF +++ LC+ + +DA M G+ + +
Sbjct: 853 KCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVV 912
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN+LI LC + +L L+++M++ + P+I T+ L + ++ EK +
Sbjct: 913 TYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDI 972
Query: 422 LTLGLRP 428
G+ P
Sbjct: 973 EDRGIVP 979
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 2/221 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ +L +SPS++ Y A+++ L++ N + +Y M +P Y LI+ CR+G
Sbjct: 762 MKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGD 821
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+D A L + M+ LG P+ + ++ G C +V E V + + P AT +
Sbjct: 822 IDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTT 881
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDR 179
L+HG+ + AF L + ME L +V N L+ L N +A + +M +
Sbjct: 882 LMHGLCKEFKIDDAFHLK-QLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSK 940
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
G LP +T+ + + + +L RG+ P +
Sbjct: 941 GLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSY 981
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 34/242 (14%)
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
NL + + L++ + K+ +V + + ECGFK F+ N++++ L ++ E L
Sbjct: 159 NLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFL 218
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVAR------------------------------ 378
E ++ P + T NI++ SLC G +++
Sbjct: 219 KESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLPNAVTYNTILNWYVKKG 278
Query: 379 ----SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
+LR+ M+ + I D+YT+N +I C++ + +A M + L PD SY+
Sbjct: 279 RCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYN 338
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
LI G+ + A F M + P T +++ + GR +EA ++ +
Sbjct: 339 TLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQIT 398
Query: 495 GI 496
G+
Sbjct: 399 GV 400
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ + ++ L K ID A+ Q M K D TYN+LI G+C + +A
Sbjct: 871 GMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDA 930
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
L L ++M+ G PN+ TY L + + ++L+ +++R + P+ SL
Sbjct: 931 LDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYKHPESL 987
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 212/498 (42%), Gaps = 40/498 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I G PS ++YN V+DAL+ N + + M D + + +TYN+L+ +C+
Sbjct: 134 IGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDR 193
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD A +L+ +M G P+ +YT ++ C +V E R L M+ ++ P +
Sbjct: 194 VDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEA-RELS-MRIKSFVP---VYNA 248
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L++G R + FEL N MA E G
Sbjct: 249 LINGFCREHKMEEVFELF------------------------NEMAVE-----------G 273
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T+ + L ++ +L RG P T+ LM+ + GR E
Sbjct: 274 IDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEAL 333
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
N + ++ N +YN +I C M A + ++M + PN T++TLI G
Sbjct: 334 DLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGF 393
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K ++ E+ ++ G P+ + M+D LCR F AL + M PPNT
Sbjct: 394 AKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNT 453
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
IT+N I+ LC G ++++ +M+ +P++ T+N ++ + +A +
Sbjct: 454 ITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGE 513
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+ + ++ + +Y+ ++ +G F A Q + G PDS T N ++ +QG
Sbjct: 514 IEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGE 573
Query: 481 FEEAHDIVKTSKERGISF 498
+ A +V ++G +
Sbjct: 574 VKTAIQLVDRLTKKGEGY 591
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 215/483 (44%), Gaps = 7/483 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + YN ++ AL K++ +D A +MS C PD +Y ++ +CR+G V+EA
Sbjct: 173 GIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEA 232
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +++ V Y LI+GFC ++ EVF + M + P+ T ++++
Sbjct: 233 RELSMRIKSF-----VPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINT 287
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A +L + R +L+ EA + +M G P
Sbjct: 288 LSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPN 347
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ + L + + E + + GV P +TY L++ KAG V N
Sbjct: 348 TVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWN 407
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + NV Y ++D C+ +M + A + M + + PN +TFNT I G C
Sbjct: 408 KMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSG 467
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ ++L + + G P+ T+N ++D L A R +AL + E+ E + N +TYN
Sbjct: 468 KTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYN 527
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++ C G +L++ K+ PD T+N +I ++C+ +++ A + +
Sbjct: 528 TILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKK 587
Query: 425 GLR-PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ-GRFE 482
G PD F+Y++L+ + DEA M G P+ T N ++ L + G
Sbjct: 588 GEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHLG 647
Query: 483 EAH 485
H
Sbjct: 648 PIH 650
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/486 (21%), Positives = 196/486 (40%), Gaps = 44/486 (9%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVD--QCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
Y +I L ID Q M ++ C D F I+I+ R G+ ++AL+ +
Sbjct: 76 YTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFV--IVINAYRRAGLAEQALKTFYR 133
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
+ G P+V Y ++D + + + + MK + N T
Sbjct: 134 IGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTY------------ 181
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
N LL L N A +L +M +G +P++ ++
Sbjct: 182 -----------------------NMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTT 218
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
V+ + + E + +K Y L+ + + E N + +
Sbjct: 219 VVSSMCRLGKVEEA-----RELSMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEG 273
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+ +V +Y+ VI+ ++ ++ A + +M R +PN+ TF +L+ G+ + +
Sbjct: 274 IDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEAL 333
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+L +++ G +P+ +N++I LC + +A+ +M GV PN TY+ LI
Sbjct: 334 DLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGF 393
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
GD+ + ++ KM + P++ + ++ CR + A +M P+
Sbjct: 394 AKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNT 453
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+++ IK L SG+ + A + M Q GC P+ T N +L+ L R EA IV
Sbjct: 454 ITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGE 513
Query: 491 SKERGI 496
+E I
Sbjct: 514 IEEMEI 519
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 105/229 (45%), Gaps = 9/229 (3%)
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+D + + M+ I+ N F +I+ + + + + + E G KP +N
Sbjct: 89 IDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNH 148
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
++D L ++F+ + M G+ N TYN+L+++LC V + +L +M
Sbjct: 149 VLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKG 208
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS--YSALIKALIKSGRFDE 448
PD ++ ++ S CR+ K+E+A + L +R +F Y+ALI + + +E
Sbjct: 209 CIPDAVSYTTVVSSMCRLGKVEEARE-------LSMRIKSFVPVYNALINGFCREHKMEE 261
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ F M G +PD T + ++ TL + G E A ++ RG S
Sbjct: 262 VFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCS 310
>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
Length = 894
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 203/468 (43%), Gaps = 35/468 (7%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D ++ +++ G+C G V+E RL++ G G P Y +LIDG+C V +L
Sbjct: 275 DDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLL 334
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
M+ + + P T +++H + R D K LL ER + NT++Y L
Sbjct: 335 GEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKC 394
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
AS+A A+L +M + P+ TF+ + D+ E +L I+R ++P +Y
Sbjct: 395 RSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSY 454
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
L+ G + L + +V + +I +D A + +M +
Sbjct: 455 TPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAE 514
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
R + P+ +N LISG CK + + LLV +LE +PDKF + ++ID R+ + D
Sbjct: 515 RQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSD 574
Query: 344 -----------------------------------ALDCLSEMVEWGVPPNTITYNILIR 368
A+ C+S M + G P+ TY LI
Sbjct: 575 ARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLID 634
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
GD+ +LR M R P+I T+ +LI +C + + AE F SM + GL P
Sbjct: 635 GYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFP 694
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
+ Y+ LI +L K + +A F M N C+P+ T + ++ L
Sbjct: 695 NVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLT 742
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 204/478 (42%), Gaps = 50/478 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP+ ++YN VI AL K S A QM + PD T+N LI CR G V+EA
Sbjct: 376 GLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEA 435
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L+++ PN +YT LI GFC V +L M R P+ T+ +L+HG
Sbjct: 436 LKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHG 495
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
L + EA + KM +R +P+
Sbjct: 496 -----------------------------------LVVSGQVDEALMVREKMAERQVMPD 520
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ ++ ++ L L+ +L +++ V+P Y L++ ++ + + +
Sbjct: 521 ANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFE 580
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++ +YN +I +CK MM+ A MR P+ T+ TLI G+ K
Sbjct: 581 FMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKG 640
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ L +++ KP+ T+ S+I C + A + M G+ PN + Y
Sbjct: 641 DIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYT 700
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF--CRMNKI-------EKAE 415
+LI SL ++ F+ M + SP+ T + L+ CR I ++A
Sbjct: 701 VLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAH 760
Query: 416 K------AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
K F +++ GL P +Y+A+I +L + +A + M GC PD T
Sbjct: 761 KKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVT 818
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 173/404 (42%), Gaps = 35/404 (8%)
Query: 81 YTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIR 140
Y+ +++ G C RV E R++E P L+ G R D + LL
Sbjct: 277 YSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLL-- 334
Query: 141 FMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLD 200
+M +G +P T+ + L D
Sbjct: 335 ---------------------------------GEMEMKGIMPTVVTYGAIIHWLGRKSD 361
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
L + +L +RG+ P Y ++ AL K + LN + R +V ++N
Sbjct: 362 LTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNT 421
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
+I FC+ ++ A ++ RE R++ PN +++ LI G C EV +LLV ++ G
Sbjct: 422 LIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRG 481
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
PD T ++I L + + ++AL +M E V P+ YN+LI LC ++ +
Sbjct: 482 HTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAK 541
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
L +M ++ PD + + LI F R +K+ A K F M G D +Y+A+IK
Sbjct: 542 NLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGY 601
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
KSG +EA SM + GC PD +T +++ ++G + A
Sbjct: 602 CKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAA 645
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 131/277 (47%)
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
+++ L GR EG R + + + V YN++ID +C+ + R + EM +
Sbjct: 281 VMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMK 340
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
I P +VT+ +I + +++ K LL + E G P+ +N++I LC+ A
Sbjct: 341 GIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQA 400
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
L L++MV P+ +T+N LI + C GDV +L+L ++ + P+ ++ LI
Sbjct: 401 LAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHG 460
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
FC ++ A M+ G PD + ALI L+ SG+ DEA M + PD
Sbjct: 461 FCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPD 520
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ N+++ L ++ A +++ E+ + F
Sbjct: 521 ANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKF 557
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 135/315 (42%), Gaps = 34/315 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P +Y +ID ++S+ + A F+ M D YN +I G C+ G+++EA+
Sbjct: 552 VQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAV 611
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M +G P+ +TYT LIDG+ + R L M +R PN T SL+ G
Sbjct: 612 MCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGY 671
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMGDRGYLPE 184
+ A E+L M+ E L +V T+L L A +AAA M L
Sbjct: 672 CNIGNTDSA-EVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHM----LLNH 726
Query: 185 SSTFDYTVTCLVTGLD------LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
S D T+ LV GL +N C D K+ S L + + L G D
Sbjct: 727 CSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKK------SALLDVFKGLISDGLD-- 778
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+++YN +I C+ NM+ +A E+ +M ++ P+ VTF +L+
Sbjct: 779 --------------PRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLY 824
Query: 299 GHCKDAEVHKTRELL 313
G + K R L
Sbjct: 825 GFSSVGKSGKWRSAL 839
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 99/250 (39%), Gaps = 35/250 (14%)
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
RDR+ + + ++ G C + V + R L+ G P +N +ID CR
Sbjct: 268 RDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDV 327
Query: 342 EDALDCLSEM---------------VEW--------------------GVPPNTITYNIL 366
L L EM + W G+ PN YN +
Sbjct: 328 GRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTV 387
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I +LC +++L + +M A R PD+ TFN LI +FCR +E+A K + L
Sbjct: 388 IYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRREL 447
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P+ SY+ LI G A + M G PD T ++ LV G+ +EA
Sbjct: 448 EPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALM 507
Query: 487 IVKTSKERGI 496
+ + ER +
Sbjct: 508 VREKMAERQV 517
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 86/200 (43%), Gaps = 15/200 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P Y +ID K I A M +CKP+ TY LI G C IG D
Sbjct: 620 VGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDS 679
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L M+ G PNV YT+LI + + E M + PN+AT+ LV+
Sbjct: 680 AEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVN 739
Query: 124 GVFRCL------------DPHKAFELLIRF--MEREPLTQKLVC-NTLLYRLSNNSMASE 168
G+ C HK LL F + + L ++ N +++ L ++M +
Sbjct: 740 GLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGK 799
Query: 169 AAAILRKMGDRGYLPESSTF 188
A + KM ++G LP+ TF
Sbjct: 800 AMELKEKMSNKGCLPDPVTF 819
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 217/495 (43%), Gaps = 6/495 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+T YN++I A ++ A M P R TYN +I+ G +AL L
Sbjct: 186 PNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALEL 245
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
K+M G P++ T+ I++ F N + ++ EIMK V P+ T+ ++H + +
Sbjct: 246 CKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVK 305
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCN--TLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+A EL ER V +++Y S A A+ M G P
Sbjct: 306 IGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNI 365
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+++ + + E + G++P +Y L+ A ++ + + N
Sbjct: 366 VSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNE 425
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS--GHCKD 303
+ K+ N SYN +ID + M+ A + EM I P++++ +TL++ G CK
Sbjct: 426 MRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGRCK- 484
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ K +L G + + +NS I ++ AL + M V P+ +TY
Sbjct: 485 -QLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVTY 543
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NILI C +G SL+ F+ M I ++++I S+ + K+ +A F SM
Sbjct: 544 NILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKE 603
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G PD +Y+ LIKA G + A F ME NG PD+ + ++E L + G+ E
Sbjct: 604 TGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIVCSSLMEALNKGGQPER 663
Query: 484 AHDIVKTSKERGISF 498
+++ K++ I
Sbjct: 664 VLQLIEFMKQKKIQL 678
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 210/485 (43%), Gaps = 37/485 (7%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
Y ++I R VD+A L +M+ PN TY LI A + +++ M+
Sbjct: 156 YGMMIRLHARHNKVDQARGLFFEMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQ 215
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
+ P+ T ++++ + KA EL + E + N +L N + S
Sbjct: 216 RAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYS 275
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV--KPRFSTYLL 225
+A A M P++ T + + CLV E + ++ +R P TY
Sbjct: 276 KAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTS 335
Query: 226 LMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
+M + G+ + + + + N+ SYN ++ + M A E + ++
Sbjct: 336 IMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNG 395
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
+ P++V++ +L++ + + A+ K RE+ + + KP+K ++N++ID A ++A+
Sbjct: 396 LRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAI 455
Query: 346 DCLSEMVEWGVPP-----------------------------------NTITYNILIRSL 370
L EM + G+ P NT+ YN I S
Sbjct: 456 SLLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSY 515
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
++GD ++L L+ M+A + PD T+N LI C++ + ++ K F ML L +
Sbjct: 516 LSLGDYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTK 575
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
YS++I + +K G+ EA TF SM++ GC PD T +++ G + A D+ K
Sbjct: 576 EVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKE 635
Query: 491 SKERG 495
+ G
Sbjct: 636 MENNG 640
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/530 (20%), Positives = 216/530 (40%), Gaps = 39/530 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P +N V+ A A F+ M + PD T NI+IH + +IG+ EA
Sbjct: 253 GVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEA 312
Query: 65 LRLVKQMEGLGYA--PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+ L M P+V TYT ++ + + V +IM V PN + +L+
Sbjct: 313 IELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALL 372
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGY 181
G + H + +++ L +V T LL ++ +A + +M
Sbjct: 373 -GAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNAC 431
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P +++ + + L E +L + G++P + L+ A + + + D
Sbjct: 432 KPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDI 491
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + N +YN I + + +A + MR ++ P+ VT+N LISG C
Sbjct: 492 ILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVTYNILISGSC 551
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K ++ + +L+ K ++S+I + + +A + M E G P+ +
Sbjct: 552 KLGRYVESLKFFEDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVL 611
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS---------------FC 406
TY LI++ G R+ LF++M+ + PD ++L+++ F
Sbjct: 612 TYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIVCSSLMEALNKGGQPERVLQLIEFM 671
Query: 407 RMNKIEKAEKAFFSMLT-----------------LGLRPDNFSYSAL---IKALIKSGRF 446
+ KI+ +KA+F +++ L + S+ L + L K GR
Sbjct: 672 KQKKIQLNQKAYFEIISSCTMLRDWKTASQIIEHLDSSLSSISFGTLNHILNFLGKCGRT 731
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ + F M + T ++L L+ G++ + ++++ ++ G+
Sbjct: 732 ESMMKLFYKMVTSCSTVGLSTYTILLRNLLIVGKWRKYVEVLQWMEDAGV 781
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 139/321 (43%), Gaps = 37/321 (11%)
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
KP TY L+ A +AG+ ++ + + + + +YN VI+ +A E
Sbjct: 185 KPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALE 244
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
+C++M + + P+L+T N ++S A+ K ++ PD T N +I CL
Sbjct: 245 LCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLV 304
Query: 337 RAHRFEDALDCLSEM-------------------------------------VEWGVPPN 359
+ + +A++ + M V GV PN
Sbjct: 305 KIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPN 364
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
++YN L+ + + G +L F+ ++ + + PDI ++ +L+ ++ R + EKA + F
Sbjct: 365 IVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFN 424
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M +P+ SY+ALI A +G EA MEQ+G PD + + +L +
Sbjct: 425 EMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGRCK 484
Query: 480 RFEEAHDIVKTSKERGISFKS 500
+ + I+ +K RGI +
Sbjct: 485 QLTKIDIILAAAKSRGIQLNT 505
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/414 (20%), Positives = 163/414 (39%), Gaps = 12/414 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++++A +S + A F +M + CKP++ +YN LI G++ EA
Sbjct: 395 GLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEA 454
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +ME G P+V + + L+ K++ ++ +L K R + N S +
Sbjct: 455 ISLLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGS 514
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
D KA L + N L+ E+ M D
Sbjct: 515 YLSLGDYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLT 574
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL-----YKAGRDVEG 239
+ + V L E ++ + G P TY L++A ++ D+
Sbjct: 575 KEVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFK 634
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ N D +V + +++ K +R ++ M+ + I N + +IS
Sbjct: 635 EMENNGTQPDAIVCSS-----LMEALNKGGQPERVLQLIEFMKQKKIQLNQKAYFEIISS 689
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKF-TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
C KT ++ L+ F T N +++ L + R E + +MV
Sbjct: 690 -CTMLRDWKTASQIIEHLDSSLSSISFGTLNHILNFLGKCGRTESMMKLFYKMVTSCSTV 748
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
TY IL+R+L +G + + + Q M+ + P +Y + +++ R N ++
Sbjct: 749 GLSTYTILLRNLLIVGKWRKYVEVLQWMEDAGVCPTLYMYQSVLPYIWRDNSMD 802
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 5/138 (3%)
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADR---ISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+ +LIR + G + ++ +F+ M+ DIY +I+ R NK+++A FF
Sbjct: 120 FPLLIREIAISGSLKHAVHVFRWMKNQENYCARNDIYGM--MIRLHARHNKVDQARGLFF 177
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M +P+ +Y++LI A ++G++ A M++ P T N ++ G
Sbjct: 178 EMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAG 237
Query: 480 RFEEAHDIVKTSKERGIS 497
+++A ++ K E G+
Sbjct: 238 NWKKALELCKKMTENGVG 255
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L I + +Y++VI + VK + A F M C PD TY LI G
Sbjct: 569 LNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRR 628
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNE 115
A L K+ME G P+ + L++ + V +++E MK++ + N+
Sbjct: 629 AWDLFKEMENNGTQPDAIVCSSLMEALNKGGQPERVLQLIEFMKQKKIQLNQ 680
>gi|302801478|ref|XP_002982495.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
gi|300149594|gb|EFJ16248.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
Length = 448
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 213/448 (47%), Gaps = 11/448 (2%)
Query: 39 DQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE 98
D PDR +YN+L+ G+ ++ VD+A ++ M G GY P+V T +L+D FC KRV E
Sbjct: 4 DGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGE 63
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
V + + ++ V +++ + D F+ + L L T+L
Sbjct: 64 VCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLD 123
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
L EA+ ++ +M + +P+ T+ ++ L ++ + D +++ + P
Sbjct: 124 CLIKTGKTREASEVVGEMIKKS-VPDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVP 182
Query: 219 RFSTYLLLMEALYKAGRDVEGD-RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
Y L+ A + R ++G R + + + ++Y +++ C C A +I
Sbjct: 183 NLDVYTSLLAAHCRT-RKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDI 241
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP--DKFTFNSMIDCL 335
MR R P+ T+ +LI G C + + + L +LE G K D +N +I+ L
Sbjct: 242 HSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLE-GEKALLDAGIYNVLIEGL 300
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
CRA + E+AL+ + MV+ G P TYN LI +V ++L+LF+ M+ SP+
Sbjct: 301 CRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNT 360
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
++ I C++ KI +A + F + G PDN +Y+ALI+ L + R DEA + +
Sbjct: 361 MIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYRE 420
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEE 483
M + G Y ++ L TL Q EE
Sbjct: 421 MGERG-----YIADRSLRTLAFQRSREE 443
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 173/426 (40%), Gaps = 37/426 (8%)
Query: 106 MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSM 165
M E V P+ + LV G+ + +A +L + + C L+ +
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60
Query: 166 ASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLL 225
E + +++ G ++ + L+ D + D + G P Y
Sbjct: 61 VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120
Query: 226 LMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
+++ L K G+ E + + K + V + +Y +I CK N D A ++ M +++
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIK-KSVPDGMTYTALISVLCKHNRADDAMKVFDIMVEKE 179
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
I PNL + +L++ HC+ ++ L V +++ G+ P T+ ++ CLC R A
Sbjct: 180 IVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAY 239
Query: 346 DCLSEMVEWGVPPNTITY------------------------------------NILIRS 369
D S M G P+ TY N+LI
Sbjct: 240 DIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEG 299
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
LC V +L + M P + T+NALI F + N+++KA + F M G P+
Sbjct: 300 LCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPN 359
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
YS I L K G+ +EA + F + GC PD+ T N ++ L R +EAH + +
Sbjct: 360 TMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYR 419
Query: 490 TSKERG 495
ERG
Sbjct: 420 EMGERG 425
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 180/421 (42%), Gaps = 43/421 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN ++ L K +S+D A M + PD T +L+ C + V E
Sbjct: 5 GVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEV 64
Query: 65 LRLVKQME-----------------------------------GLGYAPNVYTYTILIDG 89
L +++E G G P+V Y ++D
Sbjct: 65 CELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDC 124
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF---RCLDPHKAFELLIRFMEREP 146
+ E V+ M +++V P+ T +L+ + R D K F++++ E+E
Sbjct: 125 LIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMV---EKEI 180
Query: 147 LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
+ V +LL A + +M RGY P +ST+ + CL G
Sbjct: 181 VPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYD 240
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK-DRLVSNVNSYNMVIDCF 265
I + RG P +TY L+ AGR E V + ++ + + YN++I+
Sbjct: 241 IHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEGL 300
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C+ + ++ A E+ M D+ P L T+N LI G K EV K +L ++ E GF P+
Sbjct: 301 CRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNT 360
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
+++ ID LC+ + +A + + VE G P+ +TYN LIR L + + RL+++
Sbjct: 361 MIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYRE 420
Query: 386 M 386
M
Sbjct: 421 M 421
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 153/346 (44%), Gaps = 4/346 (1%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
N L+ L+ S +A A+L M GY P+ T V + E C +
Sbjct: 14 NLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVCELFQELES 73
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
GV Y +++AL +G G ++ + D + +V +Y ++DC K
Sbjct: 74 NGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIKTGKTRE 133
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A+E+ EM + + P+ +T+ LIS CK ++ +++E P+ + S++
Sbjct: 134 ASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNLDVYTSLLA 192
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
CR + + A EM++ G P+ TY +L+R LC G + + M++ P
Sbjct: 193 AHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVP 252
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP--DNFSYSALIKALIKSGRFDEAKQ 451
D T+ +LI C +I +A K F + G + D Y+ LI+ L ++ + +EA +
Sbjct: 253 DENTYASLIYGCCMAGRITEA-KVLFKEVLEGEKALLDAGIYNVLIEGLCRASKVEEALE 311
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M GC P T N ++ + ++A + + +E+G S
Sbjct: 312 VTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFS 357
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 116/281 (41%), Gaps = 7/281 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P Y A+I L K N D A F M + P+ Y L+ CR +D A RL
Sbjct: 147 PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNLDVYTSLLAAHCRTRKLDGAYRL 206
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+M GY P+ TY +L+ CN R + + M+ R P+E T SL++G
Sbjct: 207 FVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYG--- 263
Query: 128 CLDPHKAFELLIRFME----REPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
C + E + F E + L + N L+ L S EA + M D+G +P
Sbjct: 264 CCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIP 323
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + ++++ + ++G P Y ++ L K G+ E +
Sbjct: 324 TLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFF 383
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
+ V + +YN +I N MD A + REM +R
Sbjct: 384 QQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGER 424
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 35/175 (20%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
+YN +I+ L +++ ++ A M C P TYN LI G + VD+AL+L + M
Sbjct: 292 IYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVM 351
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
E G++PN Y+ IDG C ++ E + ER P+ T +L+ G+F
Sbjct: 352 EEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLF----- 406
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
N M EA + R+MG+RGY+ + S
Sbjct: 407 -----------------------------GANRM-DEAHRLYREMGERGYIADRS 431
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ + YNA+I K+N +D A F+ M P+ Y+ I G+C++G ++EA
Sbjct: 320 GCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNTMIYSTFIDGLCKVGKINEA 379
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
+Q G P+ TY LI G A R+ E R+ M ER
Sbjct: 380 HEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERG 425
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP+T +Y+ ID L K I+ A+ FQQ C PD TYN LI G+ +DEA
Sbjct: 355 GFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEA 414
Query: 65 LRLVKQMEGLGY 76
RL ++M GY
Sbjct: 415 HRLYREMGERGY 426
Score = 41.6 bits (96), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
ML G+ PD SY+ L++ L K D+A+ +M G +PD T L+++ + R
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60
Query: 481 FEEAHDIVKTSKERGIS 497
E ++ + + G++
Sbjct: 61 VGEVCELFQELESNGVA 77
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 205/436 (47%), Gaps = 45/436 (10%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
T+NI++ +C G AL L++QM PN TY +I GFC+ RV ++ M
Sbjct: 156 TFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREM 211
Query: 107 KERN-VCPNEATVRSLVHG---VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
+ER + PN+ T +++ G V R + K F+ ++ E +P ++Y
Sbjct: 212 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP-------EAVMYN--- 261
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
A++ D+G L + + D ++RGV +T
Sbjct: 262 --------ALIGGYCDQGKLDTALLYR-------------------DRMVERGVAMTVAT 294
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y LL+ AL+ GR E + + L +V +YN++I+ CK + +A EI M
Sbjct: 295 YNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMS 354
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
R + +VT+ +LI K +V +T +L + G +PD +N++I+ + +
Sbjct: 355 RRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 414
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
A + + EM + + P+ +TYN L+R LC +G V + +L +M I PD+ T+N LI
Sbjct: 415 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLI 474
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+ ++ A + M+ G P +Y+ALI+ L K+G+ D+A+ M +NG
Sbjct: 475 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 534
Query: 463 PDSYTSNLILETLVQQ 478
PD T ++E L +
Sbjct: 535 PDDSTYISLIEGLTTE 550
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 181/367 (49%), Gaps = 2/367 (0%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQM-EGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
+P+ TYN +I G C G V AL ++++M E G APN YTY +I G+C RV E
Sbjct: 182 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 241
Query: 101 RVL-EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
+V E++ + V P +L+ G A R +ER N L++
Sbjct: 242 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 301
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
L + +EA ++ +MG +G + T++ + ++ + I + +RGV+
Sbjct: 302 LFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 361
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
TY L+ AL K G+ E D+ + + + ++ YN +I+ +DRA EI
Sbjct: 362 VVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 421
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
EM + IAP+ VT+NTL+ G C V + R+L+ + + G +PD T+N++I
Sbjct: 422 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKG 481
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+DAL +EM+ G P +TYN LI+ LC G + + ++M + I+PD T+
Sbjct: 482 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 541
Query: 400 ALIQSFC 406
+LI+
Sbjct: 542 SLIEGLT 548
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 174/369 (47%), Gaps = 6/369 (1%)
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL-PESSTFD 189
P +A ELL + P + NT++ + A I+R+M +RG + P T+
Sbjct: 170 PARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYG 225
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRG-VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
++ ++E + D + +G VKP Y L+ G+ Y + + +
Sbjct: 226 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 285
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+ V +YN+++ A E+ EM + +A ++ T+N LI+GHCK+ V K
Sbjct: 286 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKK 345
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
E+ + G + T+ S+I L + + ++ E V G+ P+ + YN LI
Sbjct: 346 ALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 405
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
S G++ R+ + +M+ RI+PD T+N L++ C + ++++A K M G++P
Sbjct: 406 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQP 465
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
D +Y+ LI G +A + M G NP T N +++ L + G+ ++A ++V
Sbjct: 466 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMV 525
Query: 489 KTSKERGIS 497
K E GI+
Sbjct: 526 KEMVENGIT 534
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 147/333 (44%), Gaps = 1/333 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKPDRFTYNILIHGICRIGVVDE 63
GI+P+ Y VI K +D A F +M + + KP+ YN LI G C G +D
Sbjct: 216 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 275
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL +M G A V TY +L+ R E + ++E M + + + T L++
Sbjct: 276 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILIN 335
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + + KA E+ R + +L+Y LS E + + RG P
Sbjct: 336 GHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP 395
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + T +++ I+ K+ + P TY LM L GR E + +
Sbjct: 396 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 455
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K + ++ +YN +I + + A I EM ++ P L+T+N LI G CK+
Sbjct: 456 DEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 515
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
+ ++ ++E G PD T+ S+I+ L
Sbjct: 516 GQGDDAENMVKEMVENGITPDDSTYISLIEGLT 548
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 94/177 (53%), Gaps = 6/177 (3%)
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
TFN M+ LC A + AL+ L +M PN +TYN +I C+ G V +L + ++M
Sbjct: 156 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 211
Query: 387 -QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG-LRPDNFSYSALIKALIKSG 444
+ I+P+ YT+ +I +C++ ++++A K F MLT G ++P+ Y+ALI G
Sbjct: 212 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 271
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ D A M + G T NL++ L GR EA+++V+ +G++ F
Sbjct: 272 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVF 328
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ + Y ++I AL K + F + +PD YN LI+ G
Sbjct: 353 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 412
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+D A ++ +ME AP+ TY L+ G C RV E ++++ M +R + P+ T +
Sbjct: 413 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 472
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G D A + M + L N L+ L N +A ++++M + G
Sbjct: 473 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 532
Query: 181 YLPESSTFDYTVTCLVT 197
P+ ST+ + L T
Sbjct: 533 ITPDDSTYISLIEGLTT 549
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+ AL L+ + P+++ N+L+ + A+ A SLRL+ +M++ + + + L
Sbjct: 71 DKALSPLAVLPHLDGAPSSLP-NLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPL 129
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
+ + A F M L L +++ +++ L +G+ A + M +
Sbjct: 130 LSALPS----APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR--- 182
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
P++ T N ++ +GR + A DI++ +ERG
Sbjct: 183 -PNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 215
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 114/486 (23%), Positives = 227/486 (46%), Gaps = 1/486 (0%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y++++ +L K + LAY+ +++M D Y +++ +C+ G + A + ++
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKIL 222
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVHGVFRCLDP 131
+G+ + + T L+ GFC + + +V ++M C PN + L+HG+
Sbjct: 223 KVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRL 282
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
+AF L + E+ L+ L + + +A + +M RG P T+
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVL 342
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ L + E G+ +K G+ P TY L+ K GR V L + K
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC 402
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
NV ++N +++ C+V +A + + M D ++P++V++N LI G C++ ++ +
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYK 462
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
LL + +PD TF ++I+ C+ + + A L M+ G+ + +T LI +C
Sbjct: 463 LLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVC 522
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
+G +L + + + R+ ++ N ++ + K+++ + LGL P
Sbjct: 523 NVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVV 582
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
+Y+ L+ LI+SG + + M+ +GC P+ Y +I+ L Q GR EEA ++
Sbjct: 583 TYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAM 642
Query: 492 KERGIS 497
++ G+S
Sbjct: 643 QDSGVS 648
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 233/504 (46%), Gaps = 8/504 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PSTR Y +I AL ID A+ F +M CKP+ TY +LI G+CR G ++EA
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++M G P+V TY LI+G+C RV F +L +M++R PN T L+ G
Sbjct: 356 NGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R P+KA LL R ++ + N L+ L + A +L M P+
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPD 475
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + + L +++G+ T L++ + G+ + L
Sbjct: 476 CLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILE 535
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K R+++ +S N+++D K + + ++ + P++VT+ TL+ G +
Sbjct: 536 TLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG 595
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + +L ++ G P+ + + +I+ LC+ R E+A LS M + GV PN +TY
Sbjct: 596 DISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYT 655
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK-IEKAEKAFFSMLT 423
++++ G + R+L + M + +++L++ F K I + + L
Sbjct: 656 VMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELI 715
Query: 424 LGLRPDNFSYSA----LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+ S S L+ L K GR DE+ ++ ++G + ++I+E+ +
Sbjct: 716 SVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLEKAI-DIIMESYCSKK 774
Query: 480 RFEEAHDIVKTSKERGI--SFKSF 501
+ + +++ + G SFKSF
Sbjct: 775 KHTKCVELITLVLKSGFVPSFKSF 798
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/500 (23%), Positives = 228/500 (45%), Gaps = 14/500 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI PS YNA+I+ K + A+ M CKP+ T+N L+ G+CR+G +A
Sbjct: 366 GIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+K+M G +P++ +Y +LIDG C + +++L M ++ P+ T ++++
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINA 485
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A L + + ++ TL+ + N +A IL + L
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTT 545
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD-RYL 243
+ + + L G L E +L K G+ P TY L++ L ++G D+ G R L
Sbjct: 546 PHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG-DISGSFRML 604
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + NV Y ++I+ C+ ++ A ++ M+D ++PN VT+ ++ G+ +
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF--EDALDCLSEMVEWGVPPNTI 361
++ + E + ++E G++ + ++S++ + + E +C+ E++
Sbjct: 665 GKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGS 724
Query: 362 TYNI---LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
T + L+ LC G S L Q + + + + +++S+C K K +
Sbjct: 725 TSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLE-KAIDIIMESYCSKKKHTKCVELI 783
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI--LETLV 476
+L G P S+ +I+ L K G + A++ L ME N S ++ +E L+
Sbjct: 784 TLVLKSGFVPSFKSFCLVIQGLKKEGDTERARE--LVMELLTSNGVVEKSGVLPYVECLM 841
Query: 477 QQGRFEEAHDIVKT--SKER 494
+ G E D+V S+ER
Sbjct: 842 ETGDCSEVIDLVDQLHSRER 861
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 118/250 (47%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
N SY+++I C+V ++ A + +M ++ P+ T+ LI C + K L
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++ G KP+ T+ +ID LCR + E+A +MV+ G+ P+ ITYN LI C
Sbjct: 325 DEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKD 384
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G V + L M+ P++ TFN L++ CR+ K KA ML GL PD SY
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ LI L + G + A + SM PD T I+ +QG+ + A +
Sbjct: 445 NVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 494 RGISFKSFPG 503
+GIS G
Sbjct: 505 KGISLDEVTG 514
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 121/280 (43%), Gaps = 36/280 (12%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
N Y+ ++ K+++ A R M ++ + T+++ CK+ +
Sbjct: 159 NYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218
Query: 314 VMLLECGF------------------------------------KPDKFTFNSMIDCLCR 337
+L+ GF P+ +++ +I LC
Sbjct: 219 CKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCE 278
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
R E+A +M E G P+T TY +LI++LC G + ++ LF +M A P+++T
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHT 338
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+ LI CR KIE+A M+ G+ P +Y+ALI K GR A + ME
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVME 398
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ C P+ T N ++E L + G+ +A ++K + G+S
Sbjct: 399 KRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLS 438
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 119/249 (47%), Gaps = 9/249 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I+ LG+ PS Y ++D L++S I ++ + M + C P+ + Y I+I+G+C+ G
Sbjct: 572 INKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGR 631
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V+EA +L+ M+ G +PN TYT+++ G+ N ++ + M ER N+ S
Sbjct: 632 VEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSS 691
Query: 121 LVHGV------FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILR 174
L+ G R DP + + LI +E+ + +C L+ RL E+ +++
Sbjct: 692 LLRGFVLSQKGIRETDP-ECIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQ 750
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
+ G E + D + + + ++ +K G P F ++ L+++ L K G
Sbjct: 751 TILKSGVFLEKA-IDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEG 809
Query: 235 RDVEGDRYL 243
D E R L
Sbjct: 810 -DTERAREL 817
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 115/476 (24%), Positives = 223/476 (46%), Gaps = 3/476 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P + N I LV N +D A ++M + + +P+ TYN LI G C + +++A
Sbjct: 199 GIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDA 258
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE-IMKERNVCPNEATVRSLVH 123
+ L+ +M G +P+ +Y ++ C KR+ EV ++E ++K+ N+ P++ T + VH
Sbjct: 259 MELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVH 318
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +A E L ER K+ + +++ +A I+ +M +G +P
Sbjct: 319 MLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIP 378
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ + L +++ +L K G KP +Y L+ L K G +E +
Sbjct: 379 DVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMM 438
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N +D + N +Y++++ F + A ++ REM + P V N LI C++
Sbjct: 439 NMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQE 498
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V + + + L G + F ++I C+ E AL L +M P+ +TY
Sbjct: 499 EKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTY 558
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+I +L G + + +L KM + P T+ +I +CRM ++E K ML+
Sbjct: 559 TTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLS 618
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+ +Y+ +I+ L G ++A + + + D+ T ++++E+ + +G
Sbjct: 619 --RQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKG 672
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 202/445 (45%), Gaps = 40/445 (8%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
+PD N IH + +D+A+R +++M+ + PNV TY LI G+C+ R+ +
Sbjct: 201 EPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAME 260
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPH-KAFELLIRFMEREP--LTQKLVCNTLLY 158
++ M + P++ + +++ F C + K LL+ M ++ L ++ NT ++
Sbjct: 261 LIAEMPFKGCSPDKISYYTVMG--FLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVH 318
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
LS + EA LR+ +R + + + I+ +F + G
Sbjct: 319 MLSKHGHGDEALEFLREAEERRFRVDKVGYS----------------AIVHSFCREG--- 359
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
R + +N +F + +V +Y VI+ C+ +D+A ++
Sbjct: 360 ----------------RMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKML 403
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
R+M PN V++ L++G CK+ + RE++ M E + P+ T++ ++ R
Sbjct: 404 RQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRRE 463
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+ +A D + EM++ G P + N+LI+SLC V + R ++ + + ++ F
Sbjct: 464 GKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNF 523
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+I FC+ + +E A M PD +Y+ +I AL K GR +EA + + M +
Sbjct: 524 TTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLR 583
Query: 459 NGCNPDSYTSNLILETLVQQGRFEE 483
G P T ++ + GR E+
Sbjct: 584 VGLIPTPVTYRTVIHQYCRMGRVED 608
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 167/346 (48%), Gaps = 1/346 (0%)
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
+V +L LS + A +LR M R F Y + L +L
Sbjct: 135 IVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTM 194
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
K G++P S + L R + R+L + + NV +YN +I +C ++
Sbjct: 195 MQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHR 254
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL-VMLLECGFKPDKFTFN 329
++ A E+ EM + +P+ +++ T++ CK+ + + R L+ ML + PD+ T+N
Sbjct: 255 LEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYN 314
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+ + L + ++AL+ L E E + + Y+ ++ S C G + ++ + +M +
Sbjct: 315 TFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSK 374
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
PD+ T+ ++I C+ K+++A+K M G +P+ SY+AL+ L K+G EA
Sbjct: 375 GCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEA 434
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
++ E++ P++ T ++++ ++G+ EA D+V+ ++G
Sbjct: 435 REMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKG 480
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 196/444 (44%), Gaps = 38/444 (8%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
+P+ F Y ++ + R G + A+R++ M+ G P++ I R+ + R
Sbjct: 168 RPEAFGYVMVSYS--RAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVR 225
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
LE M+ + PN T L+ G C+ L+RL
Sbjct: 226 FLERMQIVEIEPNVITYNCLIKGY---------------------------CD--LHRLE 256
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK-RGVKPRF 220
+ A ++ +M +G P+ ++ + L + E +++ +K + P
Sbjct: 257 D------AMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQ 310
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY + L K G E +L + R + Y+ ++ FC+ MD+A EI E
Sbjct: 311 VTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNE 370
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M + P++VT+ ++I+G C++ +V + +++L + + G KP+ ++ ++++ LC+
Sbjct: 371 MFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGN 430
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
+A + ++ E PN ITY++L+ G + + L ++M P N
Sbjct: 431 SLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINL 490
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LIQS C+ K+++A++ L G + +++ +I + + A M +
Sbjct: 491 LIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSN 550
Query: 461 CNPDSYTSNLILETLVQQGRFEEA 484
+PD T I++ L ++GR EEA
Sbjct: 551 KHPDVVTYTTIIDALGKKGRIEEA 574
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 184/426 (43%), Gaps = 18/426 (4%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN + L K D A ++ + + D+ Y+ ++H CR G +D+A +
Sbjct: 308 PDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEI 367
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
V +M G P+V TYT +I+G C ++V + ++L M + PN + +L++G+ +
Sbjct: 368 VNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCK 427
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ +A E++ E + + + L++ +SEA ++R+M +G+ P
Sbjct: 428 NGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVE 487
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL-----YKAGRDVEGDRY 242
+ + L ++E ++ + G + ++ +A + D Y
Sbjct: 488 INLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 547
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L++ D V +Y +ID K ++ AT++ +M + P VT+ T+I +C+
Sbjct: 548 LSNKHPD-----VVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCR 602
Query: 303 DAEVHKTRELLVMLL---ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
V +LL +L EC + +N +I+ LC E A L +++ +
Sbjct: 603 MGRVEDLLKLLEKMLSRQEC-----RTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKID 657
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
T ++LI S + G S + +M + PD+ + + K E+A+K
Sbjct: 658 ANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLIL 717
Query: 420 SMLTLG 425
+ G
Sbjct: 718 RFVERG 723
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 72/163 (44%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
++ D + +M++ L + + A L M + + + ++ S G + ++
Sbjct: 130 YRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAM 189
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
R+ MQ I PD+ N I N+++KA + M + + P+ +Y+ LIK
Sbjct: 190 RVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGY 249
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
R ++A + M GC+PD + ++ L ++ R +E
Sbjct: 250 CDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKE 292
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 58/145 (40%)
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
+W + I Y ++ L + R+ + M RI F ++ S+ R K+
Sbjct: 127 QWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLR 186
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
A + M G+ PD + I L+ R D+A + M+ P+ T N ++
Sbjct: 187 NAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLI 246
Query: 473 ETLVQQGRFEEAHDIVKTSKERGIS 497
+ R E+A +++ +G S
Sbjct: 247 KGYCDLHRLEDAMELIAEMPFKGCS 271
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 208/474 (43%), Gaps = 3/474 (0%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y A++ L+ + + A F M D C PD Y ++HG+C G +EA L+++
Sbjct: 145 YTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAM 204
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G+ PN+ Y LIDG+CNA + +V E M PN T L+HG+ +
Sbjct: 205 SNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVE 264
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A L R +E + L+ N A +L M G +P TF +
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L + E L + +K+GVK Y L++ L K G+ D + + + V
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+ +SY+ +ID C+ + +AT + +M ++ I + VT+ +I ++ +++
Sbjct: 385 PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKI 444
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
++ G PD T+ + C R EDA + +MV+ GV PN +TYN LIR
Sbjct: 445 FDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYAN 504
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
+G V+++ F+ M P+ ++ L++ + + + + + L+ N+
Sbjct: 505 LGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYD 564
Query: 433 ---YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+ LI L++ G E M+++G P + + +I + +E
Sbjct: 565 EIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTINAMITGEITVTNEVQE 618
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/481 (25%), Positives = 209/481 (43%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
R Y +I+A + I A + PD + Y + G CR G++ A R+
Sbjct: 73 RTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVL 132
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M G +TYT L+ G A V E V M+ + P+ ++VHG+
Sbjct: 133 MPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGR 192
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A LL M +V N L+ N A + M P T+
Sbjct: 193 TEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTE 252
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L + + ++ G++P TY L++ G R L+ + +
Sbjct: 253 LIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNG 312
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
LV N +++++ID CK ++ A + + + N V + +LI G CK ++
Sbjct: 313 LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAAD 372
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
EL+ ++ GF PD +++S+ID LCR + A L +M+E G+ + +TY I+I L
Sbjct: 373 ELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDEL 432
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
++F KM A I+PDI T+ ++S+C ++E AE M+ G+ P+
Sbjct: 433 VREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNL 492
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+Y+ LI+ G +A TF M G P+ + ++L +V++ + + DI K
Sbjct: 493 VTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKI 552
Query: 491 S 491
+
Sbjct: 553 A 553
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 195/458 (42%), Gaps = 39/458 (8%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
TY LI+ C G + A + + + G AP+ Y YT + G+C A + RV +M
Sbjct: 74 TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
R T +L+HG+ M
Sbjct: 134 PLRGCLRTAFTYTALLHGLL-----------------------------------GAGMV 158
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
EA A+ M P++ + V L E +L+ + G +P Y L
Sbjct: 159 REAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNAL 218
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ AG + + +R NV +Y +I CK ++RA + M + +
Sbjct: 219 IDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGL 278
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN+VT+ LI G C + + LL ++ G P+ +TF+ +ID LC+ + E+A
Sbjct: 279 EPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQL 338
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L +V+ GV N + Y LI LC G + + L QKM ++ PD +++++LI C
Sbjct: 339 FLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC 398
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R K+ +A M+ G++ +Y+ +I L++ + K+ F M G NPD
Sbjct: 399 RQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIV 458
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFPGL 504
T + + + ++GR E+A ++ +RG+ FP L
Sbjct: 459 TYTVFVRSYCEEGRMEDAESMIVQMVDRGV----FPNL 492
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 197/411 (47%), Gaps = 24/411 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ +YNA+ID + ++ A F+ M ++C P+ TY LIHG+C+ G V+ A
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +M G PNV TYT LI G CN + FR+L +M+ + PN+ T L+
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A L +++ ++V +L+ L A +++KM G++P+
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ + L L++ +L+ +++G++ TY ++++ L R+V G
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV---REV-GSEGPK 442
Query: 245 HVFKDRLVSNVN----SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+F + + +N +Y + + +C+ M+ A + +M DR + PNLVT+NTLI G+
Sbjct: 443 KIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGY 502
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP-- 358
V + +++ G+KP++ ++ ++ + + ++++D W +
Sbjct: 503 ANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI------WKIADMK 556
Query: 359 -------NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+ I + ILI L G VA L M+ P T NA+I
Sbjct: 557 DLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS-NTINAMI 606
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 218/490 (44%), Gaps = 42/490 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I G PS ++YN V+D L+ N I + Y+ ++ M D +P+ FTYN+L+ +C+
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD A +L+ +M G P+ +YT +I C V E + E + P + +
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNA 251
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L++G+ + D AFEL +R+M ++G
Sbjct: 252 LINGLCKEHDYKGAFEL-----------------------------------MREMVEKG 276
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P ++ + L + L +KRG P T L++ + G +
Sbjct: 277 ISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDAL 336
Query: 241 RYLNHVFKD-RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
N + + L NV +YN ++ FC + +A + M + +PN+ T+ +LI+G
Sbjct: 337 DLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING 396
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
K + + +L G P+ + +M++ LCR +F++A + M + P+
Sbjct: 397 FAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPS 456
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
T+N I+ LC G + + ++F++M Q R P+I T+N L+ + N+IE+A
Sbjct: 457 VPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLT 516
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+ G+ + +Y+ L+ +G A Q M +G +PD T N+I+ +Q
Sbjct: 517 REIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQ 576
Query: 479 GRFEEAHDIV 488
G+ E A ++
Sbjct: 577 GKAERAAQML 586
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 202/471 (42%), Gaps = 34/471 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE- 63
G P+ YN ++ AL K+N +D A +MS C PD +Y +I +C +G+V E
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG 235
Query: 64 -----------------------------ALRLVKQMEGLGYAPNVYTYTILIDGFCNAK 94
A L+++M G +PNV +Y+ LI+ CN+
Sbjct: 236 RELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSG 295
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC- 153
++ F L M +R PN T+ SLV G F A +L + + L +V
Sbjct: 296 QIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAY 355
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
NTL+ ++ +A ++ M + G P T+ + L+ I + +
Sbjct: 356 NTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLT 415
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G P Y ++EAL + + E + + + K+ +V ++N I C +D
Sbjct: 416 SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDW 475
Query: 274 ATEICREMRDRD-IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A ++ R+M + PN+VT+N L+ G K + + L + G + T+N+++
Sbjct: 476 AEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLL 535
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR-- 390
C A AL + +M+ G P+ IT N++I + C G R+ ++ + R
Sbjct: 536 HGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRK 595
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
PD+ ++ +I CR N E M++ G+ P ++S LI I
Sbjct: 596 WRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFI 646
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/486 (22%), Positives = 210/486 (43%), Gaps = 82/486 (16%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVD--QCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
+ +I L +D QQM + C D F I ++ ++G+ + A+ + +
Sbjct: 79 FEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYR--QVGLAERAVEMFYR 136
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
++ G P+V Y ++D R+ ++ V MK PN T
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTY------------ 184
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
N LL L N+ A +L +M ++G P++ ++
Sbjct: 185 -----------------------NVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTT 221
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
++ + C + L K GR++ +R
Sbjct: 222 VISSM---------CEV---------------------GLVKEGREL----------AER 241
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
V+ YN +I+ CK + A E+ REM ++ I+PN+++++TLI+ C ++
Sbjct: 242 FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAF 301
Query: 311 ELLVMLLECGFKPDKFTFNSMID-CLCRAHRFEDALDCLSEMVE-WGVPPNTITYNILIR 368
L +L+ G P+ +T +S++ C R F DALD ++M+ +G+ PN + YN L++
Sbjct: 302 SFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTF-DALDLWNQMIRGFGLQPNVVAYNTLVQ 360
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
C+ G++ +++ +F M+ SP+I T+ +LI F + ++ A + MLT G P
Sbjct: 361 GFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCP 420
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+ Y+ +++AL + +F EA+ M + C P T N ++ L GR + A +
Sbjct: 421 NVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVF 480
Query: 489 KTSKER 494
+ +++
Sbjct: 481 RQMEQQ 486
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 173/380 (45%), Gaps = 7/380 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP+ Y+ +I+ L S I+LA+ QM C P+ +T + L+ G G +A
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
Query: 65 LRLVKQM-EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L L QM G G PNV Y L+ GFC+ + + V M+E PN T SL++
Sbjct: 336 LDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLIN 395
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + A + + + +V ++ L +S EA +++ M P
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP 455
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRG-VKPRFSTYLLLMEALYKAGRDVEGDRY 242
TF+ + L L+ + ++ P TY L++ L KA R E
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+F + + ++YN ++ C + A ++ +M +P+ +T N +I +CK
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Query: 303 DAEVHKTRELLVMLLECG---FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ + ++L L+ CG ++PD ++ ++I LCR++ ED + L M+ G+ P+
Sbjct: 576 QGKAERAAQMLD-LVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPS 634
Query: 360 TITYNILIRSLCAIGDVARS 379
T+++LI + D+ R+
Sbjct: 635 IATWSVLINCF-ILDDIVRA 653
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 5/207 (2%)
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
+TF +I D +V + LL + GF + F S+I + E A++
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
+ E+G P+ YN ++ +L + +++ M+ D P+++T+N L+++ C+ NK
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
++ A+K M G PD SY+ +I ++ + G E ++ E P N
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNA 251
Query: 471 ILETLVQQGRFEEAHDIVKTSKERGIS 497
++ L ++ ++ A ++++ E+GIS
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGIS 278
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 204/436 (46%), Gaps = 45/436 (10%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
T+NI++ +C G AL L++QM PN TY +I GFC+ RV ++ M
Sbjct: 485 TFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREM 540
Query: 107 KERN-VCPNEATVRSLVHG---VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
+ER + PN+ T +++ G V R + K F+ ++ E +P ++Y
Sbjct: 541 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP-------EAVMYN--- 590
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
A++ D+G L + + D ++RGV +T
Sbjct: 591 --------ALIGGYCDQGKLDTALLYR-------------------DRMVERGVAMTVAT 623
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y LL+ AL+ GR E + + L +V +YN++I+ CK + +A EI M
Sbjct: 624 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 683
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
R + +VT+ LI K +V +T +L + G +PD +N++I+ + +
Sbjct: 684 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 743
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
A + + EM + + P+ +TYN L+R LC +G V + +L +M I PD+ T+N LI
Sbjct: 744 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLI 803
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+ ++ A + M+ G P +Y+ALI+ L K+G+ D+A+ M +NG
Sbjct: 804 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 863
Query: 463 PDSYTSNLILETLVQQ 478
PD T ++E L +
Sbjct: 864 PDDSTYISLIEGLTTE 879
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 193/398 (48%), Gaps = 6/398 (1%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
T +N ++ L + A +QM +P+ TYN +I G C G V AL +++
Sbjct: 483 TTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMR 538
Query: 70 QM-EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL-EIMKERNVCPNEATVRSLVHGVFR 127
+M E G APN YTY +I G+C RV E +V E++ + V P +L+ G
Sbjct: 539 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 598
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
A R +ER N L++ L + +EA ++ +MG +G P+ T
Sbjct: 599 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 658
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + ++ + I + +RGV+ TY L+ AL K G+ E D+ +
Sbjct: 659 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 718
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ + ++ YN +I+ +DRA EI EM + IAP+ VT+NTL+ G C V
Sbjct: 719 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 778
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ R+L+ + E G +PD T+N++I +DAL +EM+ G P +TYN LI
Sbjct: 779 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 838
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+ LC G + + ++M + I+PD T+ +LI+
Sbjct: 839 QGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 876
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 175/369 (47%), Gaps = 6/369 (1%)
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL-PESSTFD 189
P +A ELL + P + NT++ + A I+R+M +RG + P T+
Sbjct: 499 PARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYG 554
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRG-VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
++ ++E + D + +G VKP Y L+ G+ Y + + +
Sbjct: 555 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 614
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+ V +YN+++ A E+ EM + +AP++ T+N LI+GHCK+ V K
Sbjct: 615 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 674
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
E+ + G + T+ ++I L + + ++ E V G+ P+ + YN LI
Sbjct: 675 ALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 734
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
S G++ R+ + +M+ RI+PD T+N L++ C + ++++A K M G++P
Sbjct: 735 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQP 794
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
D +Y+ LI G +A + M G NP T N +++ L + G+ ++A ++V
Sbjct: 795 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMV 854
Query: 489 KTSKERGIS 497
K E GI+
Sbjct: 855 KEMVENGIT 863
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 147/332 (44%), Gaps = 1/332 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKPDRFTYNILIHGICRIGVVDE 63
GI+P+ Y VI K +D A F +M + + KP+ YN LI G C G +D
Sbjct: 545 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 604
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL +M G A V TY +L+ R E + ++E M + + P+ T L++
Sbjct: 605 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 664
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + + KA E+ R + L+Y LS E + + RG P
Sbjct: 665 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 724
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + T +++ I+ K+ + P TY LM L GR E + +
Sbjct: 725 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 784
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + + ++ +YN +I + + A I EM ++ P L+T+N LI G CK+
Sbjct: 785 DEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 844
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
+ ++ ++E G PD T+ S+I+ L
Sbjct: 845 GQGDDAENMVKEMVENGITPDDSTYISLIEGL 876
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ + Y A+I AL K + F + +PD YN LI+ G
Sbjct: 682 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 741
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+D A ++ +ME AP+ TY L+ G C RV E ++++ M ER + P+ T +
Sbjct: 742 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 801
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G D A + M + L N L+ L N +A ++++M + G
Sbjct: 802 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 861
Query: 181 YLPESSTFDYTVTCLVT 197
P+ ST+ + L T
Sbjct: 862 ITPDDSTYISLIEGLTT 878
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 33/191 (17%)
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM----------------- 386
A ++M +P T T+NI++R LC+ G AR+L L ++M
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCS 526
Query: 387 ---------------QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG-LRPDN 430
+ I+P+ YT+ +I +C++ ++++A K F MLT G ++P+
Sbjct: 527 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEA 586
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
Y+ALI G+ D A M + G T NL++ L GR EA+++V+
Sbjct: 587 VMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEE 646
Query: 491 SKERGISFKSF 501
+G++ F
Sbjct: 647 MGGKGLAPDVF 657
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+L+ + A+ A SLRL+ +M++ + + + L+ + A F M
Sbjct: 421 NLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFR 476
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
L L +++ +++ L +G+ A + M + P++ T N ++ +GR +
Sbjct: 477 LRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQA 532
Query: 484 AHDIVKTSKERG 495
A DI++ +ERG
Sbjct: 533 ALDIMREMRERG 544
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 211/437 (48%), Gaps = 44/437 (10%)
Query: 14 NAVIDALVK-SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
N ++ LVK S + D+ ++ +++M + + + ++NI+++G+C++G ++ A +++ M+
Sbjct: 124 NPLLSGLVKESENGDMEFV-YREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMK 182
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE---RNVCPNEATVRSLVHGVFRCL 129
G +PNV TY LIDG+C R+ ++++ I+KE + +CPNE T L+ G C
Sbjct: 183 VWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGF--CK 240
Query: 130 DPHKAFEL-LIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D + + + + M+R+ L +V N L+ L ++ EA A+ +M P T
Sbjct: 241 DENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVT 300
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + +NE + + K+GV P TY L++A K GR
Sbjct: 301 HNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGR------------ 348
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ D F NM M DR I P + T+N LI+G C+ +V
Sbjct: 349 -------------MEDAFALYNM----------MIDRGIFPEVSTYNCLIAGLCRKGDVK 385
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
R L+ ++ D T+N +ID LC+ A+ L EM E G+ P+ +TYN L+
Sbjct: 386 AARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLM 445
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
C G++ +L + +M+ ++ T N LI+ FC ++E A ML GL
Sbjct: 446 DGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLV 505
Query: 428 PDNFSYSALIKALIKSG 444
P+ +Y + + +++ G
Sbjct: 506 PNRTTYEIIKEEMMEKG 522
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 177/366 (48%), Gaps = 5/366 (1%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGIC---RIGVVDEALRLVK 69
+N V++ L K ++ A + M V P+ TYN LI G C RIG + +A ++K
Sbjct: 158 FNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILK 217
Query: 70 QMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
+M G PN TY ILIDGFC + V+ RV M+ + + PN T L++G+
Sbjct: 218 EMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDG 277
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
+A L + + + + N L+ N +EA + M +G P + T+
Sbjct: 278 KVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYT 337
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL-NHVFK 248
+ + + + + I RG+ P STY L+ L + G DV+ R L N +
Sbjct: 338 TLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKG-DVKAARSLMNEMVS 396
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+L ++V +YN++ID CK +A ++ EM ++ + P+ VT+NTL+ G+C++ +
Sbjct: 397 KKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRA 456
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+ + G + + T N +I C R EDA L+EM+E G+ PN TY I+
Sbjct: 457 ALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKE 516
Query: 369 SLCAIG 374
+ G
Sbjct: 517 EMMEKG 522
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 177/366 (48%), Gaps = 8/366 (2%)
Query: 139 IRFMEREPLTQKLVCNTLLYRLSNNSMA-----SEAAAILRKMGDRGYLPESSTFDYTVT 193
+ F+ RE + +K+ N + + + N + + A ++ M G P T++ +
Sbjct: 139 MEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLID 198
Query: 194 --CLVTGLD-LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
C + + + + IL + +G+ P TY +L++ K R + +
Sbjct: 199 GYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQG 258
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
L NV +YN++I+ C +D A + +M D+ PN+VT N LI+G CK+ V++
Sbjct: 259 LRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAI 318
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
L + + G P+ T+ ++ID C+ R EDA + M++ G+ P TYN LI L
Sbjct: 319 NLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGL 378
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C GDV + L +M + ++S D+ T+N LI S C+ + KA K M GL P +
Sbjct: 379 CRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSH 438
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+Y+ L+ + G A ME+ G + T N++++ +GR E+A+ ++
Sbjct: 439 VTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNE 498
Query: 491 SKERGI 496
ERG+
Sbjct: 499 MLERGL 504
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 184/401 (45%), Gaps = 32/401 (7%)
Query: 79 NVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELL 138
NV ++ I+++G C ++ V+E MK V PN T +L+ G + K ++
Sbjct: 154 NVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYK-- 211
Query: 139 IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTG 198
A AIL++M +G P T++ +
Sbjct: 212 ------------------------------ADAILKEMVAKGICPNEVTYNILIDGFCKD 241
Query: 199 LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY 258
+++ + ++G++P TY +L+ L G+ E + + L NV ++
Sbjct: 242 ENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTH 301
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
N++I+ FCK ++ A + +M + + PN +T+ TLI +CKD + L M+++
Sbjct: 302 NVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMID 361
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
G P+ T+N +I LCR + A ++EMV + + +TYNILI SLC G+ +
Sbjct: 362 RGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRK 421
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+++L +M ++P T+N L+ +CR + A M G + + +++ LIK
Sbjct: 422 AVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIK 481
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
GR ++A M + G P+ T +I E ++++G
Sbjct: 482 GFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 173/405 (42%), Gaps = 39/405 (9%)
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT 155
V+ +F + M + C N LV R L + FE R + + CN
Sbjct: 67 VSAIFHAIS-MSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNP 125
Query: 156 LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRG 215
LL L S + + R+M R +F+ V L LN +++ G
Sbjct: 126 LLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWG 185
Query: 216 VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK---VNMMD 272
V P NV +YN +ID +CK + M
Sbjct: 186 VSP-----------------------------------NVITYNTLIDGYCKMGRIGKMY 210
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
+A I +EM + I PN VT+N LI G CKD V + + G +P+ T+N +I
Sbjct: 211 KADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILI 270
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
+ LC + ++A+ +MV + PN +T+N+LI C V ++ LF M+ +
Sbjct: 271 NGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVD 330
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
P+ T+ LI ++C+ ++E A + M+ G+ P+ +Y+ LI L + G A+
Sbjct: 331 PNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSL 390
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M + D T N+++++L ++G +A ++ E+G++
Sbjct: 391 MNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLN 435
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 150/328 (45%), Gaps = 43/328 (13%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ YN +ID K ++ A F +M +P+ TYNILI+G+C G VDEA
Sbjct: 223 GICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEA 282
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L QM PNV T+ +LI+GFC K V E + M+++ V PN T +L+
Sbjct: 283 VALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDA 342
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
C D ME +A A+ M DRG PE
Sbjct: 343 Y--CKDGR---------ME------------------------DAFALYNMMIDRGIFPE 367
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
ST++ CL+ GL D+ +++ + + + TY +L+++L K G +
Sbjct: 368 VSTYN----CLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAV 423
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L+ +F+ L + +YN ++D +C+ + A + M + N+VT N LI G
Sbjct: 424 KLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGF 483
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTF 328
C + LL +LE G P++ T+
Sbjct: 484 CLKGRLEDANGLLNEMLERGLVPNRTTY 511
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 216/475 (45%), Gaps = 9/475 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSV--DQCKPDRFTYNILIHGICRIGVV 61
LGI PS YN ++D+ +K D + ++M C P+ TYN++I G+ R G +
Sbjct: 1113 LGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDL 1172
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
+EA LV+ M L + +TY LI G V +V+ + M+ + P T ++
Sbjct: 1173 EEAAELVEGMR-LSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAM 1231
Query: 122 VHGVFRCLDPHKAFELLIRFMEREP---LTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
+HG+ + A ++F E L + N+LL EA + +
Sbjct: 1232 IHGLLQSGLVEAA---QVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRR 1288
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P T++ + DL E + + ++G P TY +LM+
Sbjct: 1289 AGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAM 1348
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + L + +YN I + + RA E+ + I+ + VT+N LI
Sbjct: 1349 AREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIH 1408
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G CK + +EL + ++ G +PD T+ +I C +A + M+ G+ P
Sbjct: 1409 GLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLP 1468
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ +T+ ++I + C G++ + F+KM + + P+ T+N LI + CRM + + A F
Sbjct: 1469 SAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHF 1528
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
ML GL + ++Y+ LI K G +++A + + M QNG +PD T +L+
Sbjct: 1529 HEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLK 1583
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 179/401 (44%), Gaps = 35/401 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ YNA+I L++S ++ A +KF +M PD TYN L++G C+ G + EA
Sbjct: 1220 GIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEA 1279
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L + G AP V TY ILIDG+C + E + E M E+ PN T L+ G
Sbjct: 1280 LLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKG 1339
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
L +R + +MA E +M +G P+
Sbjct: 1340 -----------SLNVRSL---------------------AMARE---FFDEMLSKGLQPD 1364
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + + D+ + + + G+ TY +L+ L K G +
Sbjct: 1365 CFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQM 1424
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L + +Y +I C+ ++ A +I M + P+ VTF +I +C+
Sbjct: 1425 KMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRG 1484
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ +LE G +P++ T+N +I LCR R + A EM+E G+ N TY
Sbjct: 1485 NLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYT 1544
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+LI C +G+ ++R + +M + I PD T AL++ F
Sbjct: 1545 LLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 207/466 (44%), Gaps = 38/466 (8%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F++M+ PD N ++ + D+ + ++M LG P++ TY L+D F
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131
Query: 93 AKRVAEVFRVLEIMKERN--VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQK 150
R +V +L+ M+ R PN+ T ++ G+ R D +A EL + M
Sbjct: 1132 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAEL-VEGMRLSKKASS 1190
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
N L+ L + + +M + G +P T++ + G+L +
Sbjct: 1191 FTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIH------------GLLQS 1238
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
+ + +F+ M A+ L+ +V +YN +++ +CK
Sbjct: 1239 GLVEAAQVKFAE----MRAM-------------------GLLPDVITYNSLLNGYCKAGN 1275
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+ A + ++R +AP ++T+N LI G+C+ ++ + R L + E G P+ T+
Sbjct: 1276 LKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTI 1335
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
++ A + EM+ G+ P+ YN I + +GD+AR+ L + + +
Sbjct: 1336 LMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEG 1395
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
IS D T+N LI C+ ++ A++ M++ GL+PD +Y+ LI A + G EA+
Sbjct: 1396 ISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREAR 1455
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ F +M +G P + T +I+ ++G A+ + E G+
Sbjct: 1456 KIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGV 1501
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 138/301 (45%), Gaps = 3/301 (0%)
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
+ R+M G P+ + + L ++ C + + ++ G++P TY L+++
Sbjct: 1070 SAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSF 1129
Query: 231 YKAGRDVEGDRYLNHVFK--DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
K GR + L + + N +YN+VI + ++ A E+ MR A
Sbjct: 1130 LKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKAS 1189
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+ T+N LI+G V K +L + + G P T+N+MI L ++ E A
Sbjct: 1190 SF-TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 1248
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
+EM G+ P+ ITYN L+ C G++ +L LF ++ ++P + T+N LI +CR+
Sbjct: 1249 AEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRL 1308
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+E+A M G P+ +Y+ L+K + A++ F M G PD +
Sbjct: 1309 GDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAY 1368
Query: 469 N 469
N
Sbjct: 1369 N 1369
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 204/436 (46%), Gaps = 45/436 (10%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
T+NI++ +C G AL L++QM PN TY +I GFC+ RV ++ M
Sbjct: 490 TFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREM 545
Query: 107 KERN-VCPNEATVRSLVHG---VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
+ER + PN+ T +++ G V R + K F+ ++ E +P ++Y
Sbjct: 546 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP-------EAVMYN--- 595
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
A++ D+G L + + D ++RGV +T
Sbjct: 596 --------ALIGGYCDQGKLDTALLYR-------------------DRMVERGVAMTVAT 628
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y LL+ AL+ GR E + + L +V +YN++I+ CK + +A EI M
Sbjct: 629 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 688
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
R + +VT+ LI K +V +T +L + G +PD +N++I+ + +
Sbjct: 689 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 748
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
A + + EM + + P+ +TYN L+R LC +G V + +L +M I PD+ T+N LI
Sbjct: 749 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLI 808
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+ ++ A + M+ G P +Y+ALI+ L K+G+ D+A+ M +NG
Sbjct: 809 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 868
Query: 463 PDSYTSNLILETLVQQ 478
PD T ++E L +
Sbjct: 869 PDDSTYISLIEGLTTE 884
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 182/366 (49%), Gaps = 2/366 (0%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQM-EGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
+P+ TYN +I G C G V AL ++++M E G APN YTY +I G+C RV E
Sbjct: 516 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 575
Query: 101 RVL-EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
+V E++ + V P +L+ G A R +ER N L++
Sbjct: 576 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 635
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
L + +EA ++ +MG +G P+ T++ + ++ + I + +RGV+
Sbjct: 636 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 695
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
TY L+ AL K G+ E D+ + + + ++ YN +I+ +DRA EI
Sbjct: 696 VVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 755
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
EM + IAP+ VT+NTL+ G C V + R+L+ + E G +PD T+N++I
Sbjct: 756 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKG 815
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+DAL +EM+ G P +TYN LI+ LC G + + ++M + I+PD T+
Sbjct: 816 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 875
Query: 400 ALIQSF 405
+LI+
Sbjct: 876 SLIEGL 881
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 175/369 (47%), Gaps = 6/369 (1%)
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL-PESSTFD 189
P +A ELL + P + NT++ + A I+R+M +RG + P T+
Sbjct: 504 PARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYG 559
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRG-VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
++ ++E + D + +G VKP Y L+ G+ Y + + +
Sbjct: 560 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 619
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+ V +YN+++ A E+ EM + +AP++ T+N LI+GHCK+ V K
Sbjct: 620 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 679
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
E+ + G + T+ ++I L + + ++ E V G+ P+ + YN LI
Sbjct: 680 ALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 739
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
S G++ R+ + +M+ RI+PD T+N L++ C + ++++A K M G++P
Sbjct: 740 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQP 799
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
D +Y+ LI G +A + M G NP T N +++ L + G+ ++A ++V
Sbjct: 800 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMV 859
Query: 489 KTSKERGIS 497
K E GI+
Sbjct: 860 KEMVENGIT 868
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 147/332 (44%), Gaps = 1/332 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKPDRFTYNILIHGICRIGVVDE 63
GI+P+ Y VI K +D A F +M + + KP+ YN LI G C G +D
Sbjct: 550 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 609
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL +M G A V TY +L+ R E + ++E M + + P+ T L++
Sbjct: 610 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 669
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + + KA E+ R + L+Y LS E + + RG P
Sbjct: 670 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 729
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + T +++ I+ K+ + P TY LM L GR E + +
Sbjct: 730 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 789
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + + ++ +YN +I + + A I EM ++ P L+T+N LI G CK+
Sbjct: 790 DEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 849
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
+ ++ ++E G PD T+ S+I+ L
Sbjct: 850 GQGDDAENMVKEMVENGITPDDSTYISLIEGL 881
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ + Y A+I AL K + F + +PD YN LI+ G
Sbjct: 687 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 746
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+D A ++ +ME AP+ TY L+ G C RV E ++++ M ER + P+ T +
Sbjct: 747 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 806
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G D A + M + L N L+ L N +A ++++M + G
Sbjct: 807 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 866
Query: 181 YLPESSTFDYTVTCLVT 197
P+ ST+ + L T
Sbjct: 867 ITPDDSTYISLIEGLTT 883
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 33/191 (17%)
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM----------------- 386
A ++M +P T T+NI++R LC+ G AR+L L ++M
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCS 531
Query: 387 ---------------QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG-LRPDN 430
+ I+P+ YT+ +I +C++ ++++A K F MLT G ++P+
Sbjct: 532 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEA 591
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
Y+ALI G+ D A M + G T NL++ L GR EA+++V+
Sbjct: 592 VMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEE 651
Query: 491 SKERGISFKSF 501
+G++ F
Sbjct: 652 MGGKGLAPDVF 662
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+L+ + A+ A SLRL+ +M++ + + + L+ + A F M
Sbjct: 426 NLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFR 481
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
L L +++ +++ L +G+ A + M + P++ T N ++ +GR +
Sbjct: 482 LRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQA 537
Query: 484 AHDIVKTSKERG 495
A DI++ +ERG
Sbjct: 538 ALDIMREMRERG 549
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 124/485 (25%), Positives = 215/485 (44%), Gaps = 21/485 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
I S+ ++ +I+A ++ + A F M CKPD F +N+++H + R A
Sbjct: 123 AIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLA 182
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + QM P+V TY ILI G C + + + + M +R + PN+ ++ G
Sbjct: 183 LAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSG 242
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A L + + N LL + +A +L+ + G++
Sbjct: 243 LCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILG 302
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ CL+ GL E ++ +KP Y +++ L + GR E
Sbjct: 303 VIGYG----CLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEAL 358
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L + + L + YN +I FC + +D A + E+ D PN T++ LI G
Sbjct: 359 TLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGM 418
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP-- 358
CK+ ++K + + + + G P TFNS+I+ LC+A+R E+A +M P
Sbjct: 419 CKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLF 478
Query: 359 -----------NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
+ + +++ LC G + ++ +L ++ + PDI T+N LI FC+
Sbjct: 479 LRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCK 538
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
I A K F M G PD+ +Y LI L ++GR ++A + F M + GC P+S T
Sbjct: 539 FGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESST 598
Query: 468 SNLIL 472
I+
Sbjct: 599 YKTIM 603
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/515 (24%), Positives = 230/515 (44%), Gaps = 24/515 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ +Y+ V+ L ++ I A F +M C D TYN+L++G C+ G +D+A
Sbjct: 228 GILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDA 287
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ + G+ V Y LI+G A+R E + M N+ P+ ++ G
Sbjct: 288 FTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRG 347
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A LL ER + N L+ + EA ++ ++ P
Sbjct: 348 LSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPN 407
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T+ + + +N+ I K G P T+ L+ L KA R +E R L
Sbjct: 408 NHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANR-LEEARLLF 466
Query: 245 H----VFKDRL----------VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
+ V K L V ++ S ++++ C+ M+ +A ++ ++ D + P++
Sbjct: 467 YQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDI 526
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
T+N LI+G CK ++ +L + G PD T+ ++ID L RA R EDAL+ +
Sbjct: 527 RTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQ 586
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
MV+ G P + TY ++ C +++ +L ++ K D + + +SF
Sbjct: 587 MVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDN--- 643
Query: 411 IEKAEKAFFSMLTLGLRPDNFS---YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
E+ + A +L + ++ NF Y+ + L+++ R EA F ++ N S +
Sbjct: 644 -EELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSAS 702
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERGISFKSFP 502
+++ L + A D+ + ERG F+ P
Sbjct: 703 CVMLIGRLCMVENLDMAMDVFLFTLERG--FRLMP 735
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 151/331 (45%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
+ L+ S M +A M D P+ F+ + LV + + +K
Sbjct: 132 SVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLK 191
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
+ P TY +L+ L K + + + + ++ N Y++V+ C+ +
Sbjct: 192 CNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFD 251
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + +MR +L+T+N L++G CK + LL +L + G + +I+
Sbjct: 252 AQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLIN 311
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
L RA R+E+A +M+ + P+ + Y I+IR L G V +L L +M + P
Sbjct: 312 GLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRP 371
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
D +NALI+ FC M +++AE + P+N +YS LI + K+G ++A+ F
Sbjct: 372 DTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIF 431
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
ME+ GC P T N ++ L + R EEA
Sbjct: 432 KEMEKLGCLPSVVTFNSLINGLCKANRLEEA 462
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 122/244 (50%), Gaps = 8/244 (3%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+++++I+ + + M ++A E MRD D P+L FN ++ + + +
Sbjct: 130 AFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQM 189
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
L+C PD T+ +I LC+ + +DAL EM + G+ PN I Y+I++ LC +
Sbjct: 190 LKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKI 249
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF----S 432
+ RLF KM+A + D+ T+N L+ FC+ ++ A F++L L + +
Sbjct: 250 FDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDA----FTLLQLLTKDGHILGVIG 305
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y LI L ++ R++EA + M + PD +++ L Q+GR EA ++
Sbjct: 306 YGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMT 365
Query: 493 ERGI 496
ERG+
Sbjct: 366 ERGL 369
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 138/324 (42%), Gaps = 35/324 (10%)
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+L +K + +L+EA +AG D + + + ++ ++N+++
Sbjct: 115 VLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLV 174
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
+ A + +M ++ P++VT+ LI G CK + L + + G P++
Sbjct: 175 RKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQI 234
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL---- 382
++ ++ LC+A + DA S+M G + ITYN+L+ C G + + L
Sbjct: 235 IYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLL 294
Query: 383 -------------------------------FQKMQADRISPDIYTFNALIQSFCRMNKI 411
+QKM + I PD+ + +I+ + ++
Sbjct: 295 TKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRV 354
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
+A M GLRPD Y+ALIK G DEA+ L + ++ C P+++T +++
Sbjct: 355 TEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSIL 414
Query: 472 LETLVQQGRFEEAHDIVKTSKERG 495
+ + + G +A I K ++ G
Sbjct: 415 ICGMCKNGLINKAQHIFKEMEKLG 438
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 138/295 (46%), Gaps = 30/295 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRF--------------TYN 49
LG PS +N++I+ L K+N ++ A L F QM + + KP F +
Sbjct: 437 LGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVR-KPSLFLRLSQGTDKVFDIASLQ 495
Query: 50 ILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER 109
+++ +C G++ +A +L+ Q+ G P++ TY ILI+GFC + F++ + M+ +
Sbjct: 496 VMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLK 555
Query: 110 NVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL-YRLSNNSMASE 168
P+ T +L+ G++R A E+ + +++ + + T++ + N+++
Sbjct: 556 GHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLA 615
Query: 169 AAAILRKMGD-RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR---FSTYL 224
+ ++ + D RG+ E V + D E + ++ +K + + Y
Sbjct: 616 LSVWMKYLRDFRGWEDEK------VRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYT 669
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN--MVIDCFCKVNMMDRATEI 277
+ + L +A RD E + V KD N++S + M+I C V +D A ++
Sbjct: 670 IFLIGLVQAKRDCEAFAIFS-VLKD-FKMNISSASCVMLIGRLCMVENLDMAMDV 722
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%)
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I L + + FE L E+ + ++ +++LI + G +++ F M+
Sbjct: 99 IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFD 158
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
PD++ FN ++ R A + ML L PD +Y LI L K+ + +A
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDAL 218
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
F M G P+ +++L L Q + +A + + G
Sbjct: 219 VLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASG 263
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 56/116 (48%)
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
++ Q+++ I F+ LI+++ EKA ++F M +PD F+++ ++ L
Sbjct: 114 KVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFL 173
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++ F A + M + NPD T +++ L + + ++A + +RGI
Sbjct: 174 VRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGI 229
>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
Length = 1161
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 222/492 (45%), Gaps = 1/492 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P YN +I+ + I+ A F M P TY +I G CR +D+AL
Sbjct: 326 LTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKAL 385
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
++ +M+ G P+ TY+ L++G+C + ++E +K R + N+ L+ G
Sbjct: 386 SILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGF 445
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ + KA ++L E + + L+ + + E IL +M G LP
Sbjct: 446 CQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPND 505
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+ + + E +RG+ + L+ A Y+ G E + + +
Sbjct: 506 VLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQY 565
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + + + S+N +ID +C + A + +M +PN+ T+ L+ G C+
Sbjct: 566 MSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGH 625
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + R+ + LL+ F D+ TFN+++ +CR ++ALD +M++ P+ TY I
Sbjct: 626 LVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTI 685
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML-TL 424
L+ C G + +L + Q M + PD + L+ +++ A F ++
Sbjct: 686 LLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKE 745
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL D +Y++L+ +KS + K+ M QN P+S + N+++ V++G+F ++
Sbjct: 746 GLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKS 805
Query: 485 HDIVKTSKERGI 496
+ K +GI
Sbjct: 806 LYLYKYMVRKGI 817
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 206/450 (45%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
TYN ++H + G AL +++ ME +VYTY I+ID C KR F +L+ M
Sbjct: 262 TYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRM 321
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
++ ++ P+E T +L++G FR + A + + + + T++ N
Sbjct: 322 RKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRI 381
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
+A +IL +M G +P T+ + L +++ RG+ + +L
Sbjct: 382 DKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTIL 441
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ + G + + L +F+D + +V +Y+ +I+ C++ M EI M+ I
Sbjct: 442 IDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGI 501
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN V + TLI +CK V + + V + G + N+++ R +A
Sbjct: 502 LPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEH 561
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
M + +++++N +I S C G++ + ++ M SP++ T+ L++ C
Sbjct: 562 FRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLC 621
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ + +A + +L + D +++AL+ + + G DEA M +N C PD +
Sbjct: 622 QGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIH 681
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGI 496
T ++L ++G+ A I++ E+G+
Sbjct: 682 TYTILLSGFCRKGKILPALVILQMMLEKGV 711
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 206/460 (44%), Gaps = 44/460 (9%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D T+N L+ GICR G +DEAL L ++M P+++TYTIL+ GFC ++ +L
Sbjct: 644 DEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVIL 703
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSN 162
++M E+ V P+ L++G+ A + + +E L + N+L+ N
Sbjct: 704 QMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLM----N 759
Query: 163 NSMASEAAAILRKMGDRGY----LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
+ S +++M Y P S++++ + V +++ + +++G++P
Sbjct: 760 GYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRP 819
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNH-----VFKDRLVSNV------------------ 255
TY LL+ L + G ++L +F DRLV ++
Sbjct: 820 DNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVF 879
Query: 256 ------------NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+++ +I+ + +D + ++ EM + PN + L++ C+
Sbjct: 880 NCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRV 939
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E+ + L + G P + +S+I LCR + E+A+ S M+ G+ P T+
Sbjct: 940 GEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATF 999
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
L+ SLC +A +L L + M+ R+ D+ ++N LI C+ I A + M +
Sbjct: 1000 TTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKS 1059
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
GL P+ +Y L A+ +GR ++ +E+ G P
Sbjct: 1060 KGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 204/485 (42%), Gaps = 14/485 (2%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN ++ VK A + M D + D +TYNI+I +CRI A L+K+M
Sbjct: 263 YNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMR 322
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
P+ TY LI+GF ++ V M +N+ P+ AT +++ G R
Sbjct: 323 KDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRID 382
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
KA +L + +L + LL SM A ++ + RG T + T+
Sbjct: 383 KALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGI-----TINKTM 437
Query: 193 -TCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
T L+ G ++++ IL + + G+ P TY L+ + + + E L+ +
Sbjct: 438 RTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQ 497
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K ++ N Y +I +CK + A + ++ R + N V N L+ ++ +
Sbjct: 498 KSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMIT 557
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ + D +FN +ID C A +MV +G PN TY L+
Sbjct: 558 EAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLL 617
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
R LC G + ++ + + + D TFNAL+ CR +++A M+
Sbjct: 618 RGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCL 677
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA--- 484
PD +Y+ L+ + G+ A M + G PD+ +L L+ +G+ + A
Sbjct: 678 PDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYV 737
Query: 485 -HDIV 488
H+I+
Sbjct: 738 FHEII 742
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 217/484 (44%), Gaps = 7/484 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ LY +I K+ + A F + + +N L+H R G++ EA
Sbjct: 500 GILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEA 559
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M + + + ++ +ID +C+ + F V + M PN T ++L+ G
Sbjct: 560 EHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRG 619
Query: 125 VFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ C H +A + + ++ + N LL + EA + KM L
Sbjct: 620 L--CQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCL 677
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ T+ ++ + IL +++GV P Y L+ L G+ V+ Y
Sbjct: 678 PDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQ-VKAASY 736
Query: 243 LNH--VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ H + K+ L ++ +YN +++ + K ++ + +M ++ PN ++N L+ G+
Sbjct: 737 VFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGY 796
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K + K+ L ++ G +PD T+ +I L + A+ L +MV G+ P+
Sbjct: 797 VKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDR 856
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ ++ILI + + +L++F M+ +SP TF+A+I R ++ + K
Sbjct: 857 LVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHE 916
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
ML +GL+P++ Y AL+ A + G D A + M+ G P + I+ L + G+
Sbjct: 917 MLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGK 976
Query: 481 FEEA 484
EEA
Sbjct: 977 LEEA 980
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 177/397 (44%), Gaps = 76/397 (19%)
Query: 144 REPLTQKL-----VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTG 198
RE L +K CN LL L N +A +L+KM ++ S T++
Sbjct: 215 RESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKS-CHISNSVTYN--------- 264
Query: 199 LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY 258
IL ++K+G RF L ++E D+E +D + ++V +Y
Sbjct: 265 -------TILHWYVKKG---RFKAALCVLE-------DME---------RDSVQADVYTY 298
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
N++ID C++ RA + + MR D+ P+ T+NTLI+G ++ +++ R + +L
Sbjct: 299 NIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLR 358
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN-------------- 364
P T+ +MID CR R + AL LSEM GV P+ +TY+
Sbjct: 359 QNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGP 418
Query: 365 ---------------------ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
ILI C +G+++++ ++ + M D I PD+ T++ALI
Sbjct: 419 AIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALIN 478
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
CRM K+ + ++ M G+ P++ Y+ LI K+G EA + F+ + + G
Sbjct: 479 GMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVA 538
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+ N +L ++G EA + ISF S
Sbjct: 539 NPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDS 575
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/471 (21%), Positives = 205/471 (43%), Gaps = 36/471 (7%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N +++ALV+ +L ++ + T NIL++ +C G +A ++++M+
Sbjct: 195 NTILNALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKS 254
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
+ N TY ++ + R VLE M+ +V + T ++ + R +
Sbjct: 255 C-HISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTR 313
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
AF LL++ M ++ LT P+ T++ +
Sbjct: 314 AF-LLLKRMRKDDLT----------------------------------PDECTYNTLIN 338
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
+N + + +++ + P +TY +++ + R + L+ + ++
Sbjct: 339 GFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMP 398
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+ +Y+ +++ +CKV+M+ A + +++ R I N LI G C+ E+ K +++L
Sbjct: 399 SELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQIL 458
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ E G PD T++++I+ +CR + + + LS M + G+ PN + Y LI C
Sbjct: 459 KSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKA 518
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G V +L+ F + + + NAL+ +F R I +AE M + + D+ S+
Sbjct: 519 GYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSF 578
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ +I + G A + M + G +P+ T +L L Q G +A
Sbjct: 579 NRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQA 629
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 156/352 (44%)
Query: 136 ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCL 195
E +++ M+ ++ + NT+L+ A +L M + T++ + L
Sbjct: 246 EDMLQKMKSCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKL 305
Query: 196 VTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNV 255
+L K + P TY L+ ++ G+ NH+ + LV +V
Sbjct: 306 CRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSV 365
Query: 256 NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
+Y +ID +C+ +D+A I EM+ + P+ +T++ L++G+CK + + L+
Sbjct: 366 ATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMED 425
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
L G +K +ID C+ A L M E G+ P+ ITY+ LI +C +
Sbjct: 426 LKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAK 485
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+ + + +MQ I P+ + LI +C+ +++A K F + GL + ++A
Sbjct: 486 MHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNA 545
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
L+ A + G EA+ M + + DS + N I+++ +G A +
Sbjct: 546 LLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSV 597
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI P+ +++I L + ++ A + F M P T+ L+H +C+ + +
Sbjct: 955 IGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIAD 1014
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L + ME +V +Y +LI G C K +++ + MK + + PN T +L
Sbjct: 1015 ALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTG 1074
Query: 124 GVFRCLDPHKAFELLIRFMER 144
++ ELL ER
Sbjct: 1075 AMYSTGRVQNGEELLEDIEER 1095
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSI-DLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G+ P+ + ++ +L K + I D +LK + M + + + D +YN+LI G+C+ + +
Sbjct: 991 GMVPTVATFTTLMHSLCKESKIADALHLK-RLMELCRLRVDVVSYNVLITGLCKDKHISD 1049
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCP 113
AL L +M+ G PN+ TY L + RV +LE ++ER + P
Sbjct: 1050 ALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 127/548 (23%), Positives = 229/548 (41%), Gaps = 54/548 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG---- 59
G PS YNA++ L + +DL + ++MS DRFT H +C+ G
Sbjct: 203 FGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWAD 262
Query: 60 ----------------------------VVDEALRLVKQMEGLGYAPNVYTYTILIDGFC 91
DEA+ + +M PNV TY L+ GF
Sbjct: 263 ALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFL 322
Query: 92 NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL 151
K++ R++ +M PN + SLVH D A++LL R +
Sbjct: 323 KKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYV 382
Query: 152 VCNTLL------YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
V N + +L + + A I +M + CL ++
Sbjct: 383 VYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAF 442
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
++ +++G P STY ++ L A + + + + +V +Y ++ID F
Sbjct: 443 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 502
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
CK ++++A + EMR +P +VT+ LI + K +V + ++ +++ G +P+
Sbjct: 503 CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 562
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMV----------------EWGVPPNTITYNILIRS 369
T+ +++D LC+A A + ++++ + PN +TY L+
Sbjct: 563 VTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDG 622
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
LC V + L M + P+ ++ALI FC+ KI+ A++ F M G P
Sbjct: 623 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS 682
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y++LI + K GR D A + M ++ C P+ T +++ L + G E+A ++
Sbjct: 683 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLS 742
Query: 490 TSKERGIS 497
+E+G S
Sbjct: 743 LMEEKGCS 750
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 122/515 (23%), Positives = 221/515 (42%), Gaps = 27/515 (5%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G S + Y+A+ DAL A +++ + + N+L+ CR G+ +E
Sbjct: 133 VGYSHTGACYDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNE 192
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL + +++ GY P+ TY L+ +A +V FRV + M E C + TV H
Sbjct: 193 ALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAH 252
Query: 124 GVFRCLDPHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ C + A L +ERE ++C ++ L S EA + L +M +
Sbjct: 253 AL--CKEGRWADAL--DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCI 308
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T+ ++ + L I++ + G P S + L+ + +
Sbjct: 309 PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 368
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFC------KVNMMDRATEICREMRDRDIAPNLVTFNTL 296
LN + YN+ I C +++D A +I EM + N V
Sbjct: 369 LNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANF 428
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
C + K +L+ ++ GF PD T++ +I LC A + E A EM GV
Sbjct: 429 ARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGV 488
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
P+ TY ILI S C G + ++ LF++M++ SP + T+ ALI ++ + ++ +A
Sbjct: 489 TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAND 548
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM----------------EQNG 460
F M+ G RP++ +Y AL+ L K+G +A + + + +++
Sbjct: 549 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 608
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
P+ T +++ L + + + AH+++ G
Sbjct: 609 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG 643
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 185/424 (43%), Gaps = 24/424 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD-- 62
G +P+ L+N+++ + AY +M+ C P YNI I IC +
Sbjct: 341 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSP 400
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGF----CNAKRVAEVFRVLEIMKERNVCPNEATV 118
+ L L +++ G A N + + F C + + F++++ M + P+ +T
Sbjct: 401 DLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTY 460
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMG 177
++ + KAF LL + M+ +T + T+L + +A + +M
Sbjct: 461 SKVITFLCHATKVEKAF-LLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 519
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-- 235
G P T+ + + + + I + G +P TY L++ L KAG
Sbjct: 520 SVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNIS 579
Query: 236 --------------DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+ D Y + L NV +Y ++D CK + +D A E+ M
Sbjct: 580 KAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM 639
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
PN + ++ LI G CK ++ +E+ + + +CG+ P T+ S+ID + + R
Sbjct: 640 LSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRL 699
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+ A+ LS+M++ PN +TY +I LC IG+ ++L+L M+ SP++ T+ AL
Sbjct: 700 DLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 759
Query: 402 IQSF 405
I
Sbjct: 760 IDGL 763
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 104/249 (41%), Gaps = 16/249 (6%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G SP+ Y A+I A +K+ + A F +M C+P+ TY L+ G+C+ G + +
Sbjct: 521 VGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISK 580
Query: 64 ALRLVKQMEGLG----------------YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
A + ++ G APNV TY L+DG C A +V +L+ M
Sbjct: 581 AFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAML 640
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
PN +L+ G + A E+ ++ + L +L+ R+ +
Sbjct: 641 SSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLD 700
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
A +L +M P T+ + L + + +L ++G P TY L+
Sbjct: 701 LAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 760
Query: 228 EALYKAGRD 236
+ L ++ +D
Sbjct: 761 DGLGQSWQD 769
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 121/481 (25%), Positives = 212/481 (44%), Gaps = 13/481 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
I S+ ++ +I+A ++ + A F M CKPD F +N+++H + R A
Sbjct: 123 AIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLA 182
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + QM P+V TY ILI G C + + + + M +R + PN+ ++ G
Sbjct: 183 LAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSG 242
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A L + + N LL + +A +L+ + G++
Sbjct: 243 LCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILG 302
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + L E ++ +KP Y +++ L + GR E L
Sbjct: 303 VIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLG 362
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L + YN +I FC + +D A + E+ D PN T++ LI G CK+
Sbjct: 363 EMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNG 422
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP------ 358
++K + + + + G P TFNS+I+ LC+A+R E+A +M P
Sbjct: 423 LINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLS 482
Query: 359 -------NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
+ + +++ LC G + ++ +L ++ + PDI T+N LI FC+ I
Sbjct: 483 QGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNI 542
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
A K F M G PD+ +Y LI L ++GR ++A + F M + GC P+S T I
Sbjct: 543 NGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTI 602
Query: 472 L 472
+
Sbjct: 603 M 603
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 125/515 (24%), Positives = 230/515 (44%), Gaps = 24/515 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ +Y+ V+ L ++ I A F +M C D TYN+L++G C+ G +D+A
Sbjct: 228 GILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDA 287
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ + G+ V Y LI+G A+R E + M N+ P+ ++ G
Sbjct: 288 FTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRG 347
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A LL ER + N L+ + EA ++ ++ P
Sbjct: 348 LSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPN 407
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T+ + + +N+ I K G P T+ L+ L KA R +E R L
Sbjct: 408 NHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANR-LEEARLLF 466
Query: 245 H----VFKDRL----------VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
+ V K L V ++ S ++++ C+ M+ +A ++ ++ D + P++
Sbjct: 467 YQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDI 526
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
T+N LI+G CK ++ +L + G PD T+ ++ID L RA R EDAL+ +
Sbjct: 527 RTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQ 586
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
MV+ G P + TY ++ C +++ +L ++ K D + + +SF
Sbjct: 587 MVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDN--- 643
Query: 411 IEKAEKAFFSMLTLGLRPDNFS---YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
E+ + A +L + ++ NF Y+ + L+++ R EA F ++ N S +
Sbjct: 644 -EELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSAS 702
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERGISFKSFP 502
+++ L + A D+ + ERG F+ P
Sbjct: 703 CVMLIGRLCMVENLDMAMDVFLFTLERG--FRLMP 735
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 151/331 (45%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
+ L+ S M +A M D P+ F+ + LV + + +K
Sbjct: 132 SVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLK 191
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
+ P TY +L+ L K + + + + ++ N Y++V+ C+ +
Sbjct: 192 CNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFD 251
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + +MR +L+T+N L++G CK + LL +L + G + +I+
Sbjct: 252 AQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLIN 311
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
L RA R+E+A +M+ + P+ + Y I+IR L G V +L L +M + P
Sbjct: 312 GLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRP 371
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
D +NALI+ FC M +++AE + P+N +YS LI + K+G ++A+ F
Sbjct: 372 DTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIF 431
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
ME+ GC P T N ++ L + R EEA
Sbjct: 432 KEMEKLGCLPSVVTFNSLINGLCKANRLEEA 462
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 122/244 (50%), Gaps = 8/244 (3%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+++++I+ + + M ++A E MRD D P+L FN ++ + + +
Sbjct: 130 AFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQM 189
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
L+C PD T+ +I LC+ + +DAL EM + G+ PN I Y+I++ LC +
Sbjct: 190 LKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKI 249
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF----S 432
+ RLF KM+A + D+ T+N L+ FC+ ++ A F++L L + +
Sbjct: 250 FDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDA----FTLLQLLTKDGHILGVIG 305
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y LI L ++ R++EA + M + PD +++ L Q+GR EA ++
Sbjct: 306 YGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMT 365
Query: 493 ERGI 496
ERG+
Sbjct: 366 ERGL 369
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 141/327 (43%), Gaps = 41/327 (12%)
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+L +K + +L+EA +AG D + + ++ ++N+++
Sbjct: 115 VLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLV 174
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC---GFKP 323
+ A + +M ++ P++VT+ LI G CK KT++ LV+ E G P
Sbjct: 175 RKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTC---KTQDALVLFDEMTDRGILP 231
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL- 382
++ ++ ++ LC+A + DA S+M G + ITYN+L+ C G + + L
Sbjct: 232 NQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLL 291
Query: 383 ----------------------------------FQKMQADRISPDIYTFNALIQSFCRM 408
+QKM + I PD+ + +I+ +
Sbjct: 292 QLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQE 351
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
++ +A M GLRPD Y+ALIK G DEA+ L + ++ C P+++T
Sbjct: 352 GRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTY 411
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERG 495
++++ + + G +A I K ++ G
Sbjct: 412 SILICGMCKNGLINKAQHIFKEMEKLG 438
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 138/295 (46%), Gaps = 30/295 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRF--------------TYN 49
LG PS +N++I+ L K+N ++ A L F QM + + KP F +
Sbjct: 437 LGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVR-KPSLFLRLSQGTDKVFDIASLQ 495
Query: 50 ILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER 109
+++ +C G++ +A +L+ Q+ G P++ TY ILI+GFC + F++ + M+ +
Sbjct: 496 VMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLK 555
Query: 110 NVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL-YRLSNNSMASE 168
P+ T +L+ G++R A E+ + +++ + + T++ + N+++
Sbjct: 556 GHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLA 615
Query: 169 AAAILRKMGD-RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR---FSTYL 224
+ ++ + D RG+ E V + D E + ++ +K + + Y
Sbjct: 616 LSVWMKYLRDFRGWEDEK------VRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYT 669
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN--MVIDCFCKVNMMDRATEI 277
+ + L +A RD E + V KD N++S + M+I C V +D A ++
Sbjct: 670 IFLIGLVQAKRDCEAFAIFS-VLKD-FKMNISSASCVMLIGRLCMVENLDMAMDV 722
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%)
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I L + + FE L E+ + ++ +++LI + G +++ F M+
Sbjct: 99 IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFD 158
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
PD++ FN ++ R A + ML L PD +Y LI L K+ + +A
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDAL 218
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
F M G P+ +++L L Q + +A + + G
Sbjct: 219 VLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASG 263
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 56/116 (48%)
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
++ Q+++ I F+ LI+++ EKA ++F M +PD F+++ ++ L
Sbjct: 114 KVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFL 173
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++ F A + M + NPD T +++ L + + ++A + +RGI
Sbjct: 174 VRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGI 229
>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
Length = 1031
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 221/493 (44%), Gaps = 16/493 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI YN +ID L K AYL ++M PD +YN LIHG G ++ A
Sbjct: 294 GIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLA 353
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + QM P+V TYT LIDG+C R E RVL M+ V P E S
Sbjct: 354 IYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREV---SKAKQ 410
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +C +L ++ + +T + N + M E IL +M G LP
Sbjct: 411 ILKC--------MLADGIDPDVITYSALING----MCKMGMIHETKEILSRMQKSGVLPN 458
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + V E + G+ + L+ + Y+ G E +++
Sbjct: 459 NVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQ 518
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
++ + ++ +V S+N +ID +C+ + A + M P++ T+ +L+ G C+
Sbjct: 519 YMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGG 578
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + +E +V LLE D+ T N+++ +C+ ++ALD +MV + P+T TY
Sbjct: 579 HLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYT 638
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML-T 423
IL+ C G + +L L Q M + PD + L+ +++ A F ++
Sbjct: 639 ILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICK 698
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL D +Y++++ +K G+ +E ++ +M +N P S + N+++ +++G+
Sbjct: 699 EGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSR 758
Query: 484 AHDIVKTSKERGI 496
+ + + GI
Sbjct: 759 TLYLYRDMVKEGI 771
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 135/540 (25%), Positives = 227/540 (42%), Gaps = 60/540 (11%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ ++P YN +I I+LA F QM KP TY LI G CR G DE
Sbjct: 328 VNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDE 387
Query: 64 ALRLVKQME--GL------------------GYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
A R++ +M+ G+ G P+V TY+ LI+G C + E +L
Sbjct: 388 ARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEIL 447
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
M++ V PN +LV + +A + + + ++ N LL
Sbjct: 448 SRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYRE 507
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
M +EA + M + ++F+ + ++ E + D ++ G P TY
Sbjct: 508 GMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTY 567
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
L+ L + G V+ ++ ++ + + + N ++ CK +D A ++C +M
Sbjct: 568 GSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVT 627
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR------ 337
R+I P+ T+ L+ G CK ++ LL M+LE G PD + +++ L
Sbjct: 628 RNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKA 687
Query: 338 -AHRFEDAL-------DCLS----------------------EMVEWGVPPNTITYNILI 367
++ F++ + DC++ M E V P++ +YNIL+
Sbjct: 688 ASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILM 747
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL--- 424
G ++R+L L++ M + I PD T+ LI C IE A K F + L
Sbjct: 748 HGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVK-FLEKMVLEES 806
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL+P + Y ALI A + G D A + M+ G P + I+ L + G+ EEA
Sbjct: 807 GLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEA 866
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/504 (25%), Positives = 227/504 (45%), Gaps = 28/504 (5%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCK-PDRFTYNILIHGICRIGVVDEALRLVKQME 72
N V+++L + A Q+M C+ P+ TYN +++ + G ALR++ ME
Sbjct: 234 NIVLNSLCTQGKLSKAESMLQKMK--NCRLPNAVTYNTILNWYVKKGRCKSALRILDDME 291
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF------ 126
G ++YTY I+ID C KR A + +L+ M+E N+ P+E + +L+HG F
Sbjct: 292 KNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKIN 351
Query: 127 -----------RCLDPHKA-FELLIRFMEREPLTQKLVCNTLLYRLSNNSM----ASEAA 170
+ L P A + LI R T + +LY + + S+A
Sbjct: 352 LAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDE--ARRVLYEMQITGVRPREVSKAK 409
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
IL+ M G P+ T+ + + ++ET IL K GV P Y L+
Sbjct: 410 QILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYF 469
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
KAG E +Y +++ LV+N +N ++ F + M+ A + + M I+ ++
Sbjct: 470 CKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDV 529
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
+FN +I +C+ V + + ++ G+ PD T+ S++ LC+ A + +
Sbjct: 530 ASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVY 589
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
++E + T N L+ +C G + +L L +KM I PD YT+ L+ FC+ K
Sbjct: 590 LLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGK 649
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME-QNGCNPDSYTSN 469
I A ML GL PD +Y+ L+ L+ G+ A F + + G D N
Sbjct: 650 IVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYN 709
Query: 470 LILETLVQQGRFEEAHDIVKTSKE 493
++ ++ G+ E +++ E
Sbjct: 710 SMMNGYLKGGQINEIERLMRNMHE 733
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 196/427 (45%), Gaps = 3/427 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y +++ L + + A + C D T N L+ GIC+ G +DEA
Sbjct: 559 GWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEA 618
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L ++M P+ YTYTIL+DGFC ++ +L++M E+ + P+ L++G
Sbjct: 619 LDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNG 678
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ A + + +E L + N+++ +E ++R M + P
Sbjct: 679 LVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYP 738
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
S++++ + + L+ T + +K G+KP TY LL+ L + G ++L
Sbjct: 739 SSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFL 798
Query: 244 NHVFKDR--LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + L Y +I+ C+V +D A E+ +M+ + P+ V ++++ G C
Sbjct: 799 EKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLC 858
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K +V + + ++ G P TF +++ LC+ + +DA M G+ + +
Sbjct: 859 KCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVV 918
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN+LI LC + +L L+++M++ + P+I T+ L + ++ EK +
Sbjct: 919 TYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDI 978
Query: 422 LTLGLRP 428
G+ P
Sbjct: 979 EDRGIVP 985
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 116/500 (23%), Positives = 225/500 (45%), Gaps = 13/500 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ ++ ++NA++ + + I A Q MS + D ++N +I C+ G V EA
Sbjct: 489 GLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEA 548
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M G+ P++ TY L+ G C + + + + E+ +E T+ +L+ G
Sbjct: 549 FSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVG 608
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A +L + + R L LL A +L+ M ++G +P+
Sbjct: 609 ICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPD 668
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFI------KRGVKPRFSTYLLLMEALYKAGRDVE 238
+ + TCL+ GL +NE +++ K G+ Y +M K G+ E
Sbjct: 669 TIAY----TCLLNGL-VNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINE 723
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+R + ++ ++ + + SYN+++ + K + R + R+M I P+ VT+ LI
Sbjct: 724 IERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIF 783
Query: 299 GHCKDAEVHKTRELL--VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
G C+ + + L ++L E G +P + ++I+ CR + A + +M GV
Sbjct: 784 GLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGV 843
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
P+ + + ++R LC G V ++ +F + + P I TF L+ C+ KI+ A
Sbjct: 844 VPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFH 903
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
M + GL+ D +Y+ LI L +A + M+ G P+ T + +
Sbjct: 904 LKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMY 963
Query: 477 QQGRFEEAHDIVKTSKERGI 496
G ++ ++K ++RGI
Sbjct: 964 ATGTMQDGEKLLKDIEDRGI 983
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/505 (23%), Positives = 225/505 (44%), Gaps = 84/505 (16%)
Query: 22 KSNSIDLAY----LKFQQMSVDQCKPDRFT--YNILIHGICRIGVVDEALRLVKQMEGLG 75
KS +D A+ L+ V Q DR T Y + +H + + + +A+ +++ + G
Sbjct: 79 KSGKLDKAHGKLALRMLDSIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTG 138
Query: 76 YA-----------------PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
++ N+++ +L++ + +V + + M E C +A++
Sbjct: 139 FSCSAIFSSLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDE---CGFKASL 195
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL-----VCNTLLYRLSNNSMASEAAAIL 173
S + + L E + F+ +E L +K CN +L L S+A ++L
Sbjct: 196 FS-CNNILNALVGINKSEYVWLFL-KESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESML 253
Query: 174 RKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
+KM + LP + T++ IL+ ++K+G R + L +++ + K
Sbjct: 254 QKMKN-CRLPNAVTYN----------------TILNWYVKKG---RCKSALRILDDMEKN 293
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
G +E D Y +YN++ID CK+ RA + + MR+ ++ P+ ++
Sbjct: 294 G--IEADLY--------------TYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSY 337
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
NTLI G + +++ + +L KP T+ ++ID CR R ++A L EM
Sbjct: 338 NTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQI 397
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
GV P +V+++ ++ + M AD I PD+ T++ALI C+M I +
Sbjct: 398 TGVRPR---------------EVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHE 442
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
++ M G+ P+N Y+ L+ K+G EA + F+ + ++G +S N +L
Sbjct: 443 TKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLC 502
Query: 474 TLVQQGRFEEAHDIVKTSKERGISF 498
+ ++G EA + ISF
Sbjct: 503 SFYREGMIAEAEQFKQYMSRMKISF 527
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ PS ++++ L K ++ A + F + P T+ L+HG+C+ +D+
Sbjct: 841 LGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDD 900
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L + ME G +V TY +LI G CN K + + + E MK + + PN T +L
Sbjct: 901 AFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTG 960
Query: 124 GVF 126
++
Sbjct: 961 AMY 963
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/515 (23%), Positives = 208/515 (40%), Gaps = 107/515 (20%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
NA++D L ++ + + F+++ CKP+ +Y L+ +CR G +D+A + +M
Sbjct: 4 NALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAR 63
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
P+V+TY ++ID C A+R++
Sbjct: 64 EKLVPDVFTYNVVIDTLCKARRISRA---------------------------------- 89
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
I F E P + NTLL L N ++A ++ M G P T+ +
Sbjct: 90 -----IEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLID 144
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
G+L R P
Sbjct: 145 VFCKMCQFETAYGLLQLMASRKCSP----------------------------------- 169
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
V SY +I+ CK +D+A ++ EM+ P+ VT+NTLI G C +H+ ++LL
Sbjct: 170 TVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLL 229
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+++E GF+PDK TF ++I+ LC R ++A M + G P+ +T+ +L+ LC +
Sbjct: 230 TVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIL 289
Query: 374 GDVA---------------------------------RSLRLFQKMQADRISPDIYTFNA 400
+ R+ RL QKM + P++ T+ A
Sbjct: 290 RKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTA 349
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
+ + +A + F ML G+ PD +Y+ L+ K+ R D A++ M+Q+G
Sbjct: 350 FFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSG 409
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
P+ T N ++ ++G+ E +++ T RG
Sbjct: 410 LPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRG 444
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 189/457 (41%), Gaps = 51/457 (11%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNI----------------- 50
P+ Y ++ AL ++ ID A +M+ ++ PD FTYN+
Sbjct: 33 PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEF 92
Query: 51 --------------LIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRV 96
L+ G+C+ G V +A L MEG G P+ TYT LID FC +
Sbjct: 93 FETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQF 152
Query: 97 AEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTL 156
+ +L++M R P + S+++G+ + +A++L ++ NTL
Sbjct: 153 ETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTL 212
Query: 157 LYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
++ L EA +L M + G+ P+ TF + L T + E + K+G
Sbjct: 213 IHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGC 272
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNS-------YNMVIDCFCKVN 269
P T+ +L+ L R L +V N + Y + +
Sbjct: 273 APDLVTHTVLVSKLCIL-------RKLRPALS--VVRNYPACPEAVILYTPIFRELGRRR 323
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
DRA + ++M R + PN+VT+ G E + +LE G +PD +N
Sbjct: 324 GFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYN 383
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++D C+A R + A + M + G+PPN +TYN L+ C G V L M +
Sbjct: 384 VLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSR 443
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
PD+ T++ L+ + + + A +S L L +
Sbjct: 444 GRQPDVATWSTLVAGLFMVGQADAA----YSFLNLAM 476
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 154/329 (46%), Gaps = 43/329 (13%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP+ Y ++I+ L K+ +D AY F++M + CKPDR TYN LIHG+C + EA
Sbjct: 168 SPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKD 227
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG-- 124
L+ M G+ P+ T+T LI+G C R+ E F + + M ++ P+ T LV
Sbjct: 228 LLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLC 287
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLP 183
+ R L P + ++R P + ++ T ++R L AA +L+KM R
Sbjct: 288 ILRKLRPALS---VVRNYPACP--EAVILYTPIFRELGRRRGFDRAARLLQKMARR---- 338
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
GV P TY + L + R
Sbjct: 339 -------------------------------GVPPNVVTYTAFFKGLGDWKEGMRAYREF 367
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + ++ +YN+++D FCK + +D A ++ R M + PN+VT+NTL+ HC+
Sbjct: 368 RRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRK 427
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMI 332
+V ELL ++ G +PD T+++++
Sbjct: 428 GKVEAIGELLHTMVSRGRQPDVATWSTLV 456
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 88/171 (51%), Gaps = 4/171 (2%)
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T N+++D L RA R E + + PN ++Y L+++LC G + ++ +M
Sbjct: 2 TCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEM 61
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+++ PD++T+N +I + C+ +I +A + F +M PD +Y+ L+ L K+GR
Sbjct: 62 AREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRV 117
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+A F SME G P T +++ + +FE A+ +++ R S
Sbjct: 118 AQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCS 168
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P YN ++D K++ +D+A + M P+ TYN L+ CR G V+
Sbjct: 374 GIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAI 433
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGF 90
L+ M G P+V T++ L+ G
Sbjct: 434 GELLHTMVSRGRQPDVATWSTLVAGL 459
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/480 (25%), Positives = 220/480 (45%), Gaps = 31/480 (6%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ ISP+ +N VI + K +D A F+ M V +C+PD +TY L+ G+C+ +DE
Sbjct: 163 VNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDE 222
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+ +M+ G P+ T+ +LI+G C +A V ++++ M + PNE T +L+H
Sbjct: 223 AVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIH 282
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ KA LL R + + + + T++ L A + A +L M +RGY
Sbjct: 283 GLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGY-- 340
Query: 184 ESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
+Y + L++GL E + + + Y +++ L + G+ E
Sbjct: 341 --HVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEA 398
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L+ + +R N +Y+ ++ F + +A E+ ++M + N V ++ LI G
Sbjct: 399 LEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHG 458
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV--EWGVP 357
CKD +V + + +L G KPD + SMI+ L A EDAL +EM+ E
Sbjct: 459 LCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQ 518
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT-------------------- 397
P+ +TYNIL+ +LC ++R++ L M PD+ T
Sbjct: 519 PDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGRE 578
Query: 398 -FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
+ L+ + ++ A K ML L P +++ +++ L + A Q S+
Sbjct: 579 FLDGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAIQKCWSI 638
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 194/438 (44%), Gaps = 37/438 (8%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P+ T+N++I +C++G+VD+A+++ + M P+VYTY L+DG C A R+ E +
Sbjct: 167 PNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSL 226
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
L+ M+ P+ T L++G+ + D L R KLV N L
Sbjct: 227 LDEMQIDGCFPSPVTFNVLINGLCKKGD-------LAR-------VAKLVDNMFL----- 267
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+G P T++ + L L + +LD + P T
Sbjct: 268 ----------------KGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVT 311
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y ++ L K GR ++G R L + + N Y+ +I K A ++ +EM
Sbjct: 312 YGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMT 371
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
++ N + ++ +I G C+D + + E+L + KP+ +T++S++ A
Sbjct: 372 VKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGH 431
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
A++ +M + N + Y++LI LC G V ++ ++ +M PD+ + ++I
Sbjct: 432 KAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMI 491
Query: 403 QSFCRMNKIEKAEKAFFSMLTL--GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
+E A + + ML +PD +Y+ L+ AL K A SM G
Sbjct: 492 NGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRG 551
Query: 461 CNPDSYTSNLILETLVQQ 478
C+PD T + L TL ++
Sbjct: 552 CDPDLVTCIIFLRTLREK 569
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 211/493 (42%), Gaps = 45/493 (9%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVD-QCKPDRFTYNILIHGICRIGVVDEALRLVK 69
+ + + A K++ + A F +M+ + +CK ++N +++ I + G+ AL
Sbjct: 96 KCFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYN 155
Query: 70 QM---EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+ +G+ +PNV T+ ++I C V + ++ M P+ T +L+ G
Sbjct: 156 HVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDG-- 213
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
L EA ++L +M G P
Sbjct: 214 ---------------------------------LCKADRIDEAVSLLDEMQIDGCFPSPV 240
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
TF+ + L DL ++D +G P TY L+ L G+ + L+ +
Sbjct: 241 TFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRM 300
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ V NV +Y +I+ K + M +R N ++ LISG K+ +
Sbjct: 301 VSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKS 360
Query: 307 HKTRELL--VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +L + + EC + ++++ID LCR + ++AL+ LSEM PN TY+
Sbjct: 361 QEAMQLFKEMTVKECEL--NTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYS 418
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L++ G+ +++ +++ M + + ++ LI C+ K+++A + ML
Sbjct: 419 SLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGK 478
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSM--EQNGCNPDSYTSNLILETLVQQGRFE 482
G +PD +Y ++I L +G ++A Q + M ++ PD T N++L L +Q
Sbjct: 479 GCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSIS 538
Query: 483 EAHDIVKTSKERG 495
A D++ + +RG
Sbjct: 539 RAIDLLNSMLDRG 551
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P+ TFN +I +C+ +DA+ +M P+ TY L+ LC + ++ L
Sbjct: 167 PNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSL 226
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
+MQ D P TFN LI C+ + + K +M G P+ +Y+ LI L
Sbjct: 227 LDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCL 286
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
G+ ++A M + C P+ T I+ LV+QGR + ++ +ERG +
Sbjct: 287 KGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEY 345
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/527 (24%), Positives = 230/527 (43%), Gaps = 35/527 (6%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
R+Y ++D + ++ A +M K + N LI G C++G V EA R+
Sbjct: 333 RVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVG 392
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M P+ Y+Y L+DG+C +V++ F + E M + P T +++ G+
Sbjct: 393 MVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGS 452
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
A L +ER ++ C T+L + A + +++ RG+ + F+
Sbjct: 453 YDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNT 512
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
++ L L E + D + G+ P TY L + K G E + + +
Sbjct: 513 MISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQA 572
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+ +++ YN +ID K+ ++ T++ EM+ R ++PN+VT+ TLISG C + ++ K
Sbjct: 573 MSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAF 632
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP------------ 358
L ++E GF P+ + ++ L R R +A L +M+++ +
Sbjct: 633 HLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKN 692
Query: 359 -----------------------NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
N I YNI I LC G + + + + + PD
Sbjct: 693 DLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDN 752
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
+T+ LI + +++A K ML GL P+ Y+ALI L K G D A++ F
Sbjct: 753 FTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYK 812
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFP 502
+ Q G P++ T N+++ + G ++A + + E GIS + P
Sbjct: 813 LYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRIIP 859
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 199/416 (47%), Gaps = 8/416 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P+ YN VI LV S D A + M P+ + ++ ++G D A
Sbjct: 432 GITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRA 491
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L K++ G G+ + + +I G C ++ E V + MKE + P+E T R+L G
Sbjct: 492 MMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDG 551
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKL-VCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +AF++ MER+ ++ + + N+L+ L ++ +L +M RG P
Sbjct: 552 YCKNGNVQEAFQIK-GVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSP 610
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ ++ L++ + I+RG P ++ +LY+ R E L
Sbjct: 611 NVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVIL 670
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL---VTFNTLISGH 300
+ + +++ +N D K ++ A +I + DI +L + +N I G
Sbjct: 671 DKMLDFDILA---VHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGL 727
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK ++ + R +L +L+ GF PD FT+ ++I + ++A EM+E G+ PN
Sbjct: 728 CKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNI 787
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
YN LI LC +G++ R+ RLF K+ + P+ T+N LI +CR+ ++KA +
Sbjct: 788 TIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASR 843
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 210/486 (43%), Gaps = 38/486 (7%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S +G P R + ++ LV+ +A + F Q+ PD + +I+++ C++G
Sbjct: 182 MSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGR 241
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD A+ ++++M G PNV TY L++G+ V RVL +M ER V N T
Sbjct: 242 VDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTM 301
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPL--------------------------------- 147
L+ G + +A +LL E E L
Sbjct: 302 LMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRV 361
Query: 148 ---TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNET 204
++CNTL+ EA + M D P+ +++ + +++
Sbjct: 362 GLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKA 421
Query: 205 CGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS-NVNSYNMVID 263
+ + + G+ P TY +++ L G + +L H+ +R V+ N S ++D
Sbjct: 422 FMLCEEMLGDGITPTVVTYNTVIKGLVDVG-SYDDALHLWHLMVERGVTPNEISCCTMLD 480
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
CF K+ DRA + +E+ R + V FNT+ISG CK ++ + + + E G P
Sbjct: 481 CFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSP 540
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D+ T+ ++ D C+ ++A M + + YN LI L I + L
Sbjct: 541 DEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLL 600
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+MQ +SP++ T+ LI +C K++KA +F M+ G P+ S ++ +L +
Sbjct: 601 VEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRD 660
Query: 444 GRFDEA 449
R EA
Sbjct: 661 DRISEA 666
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/487 (24%), Positives = 214/487 (43%), Gaps = 36/487 (7%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
+++ ++ A + A F +MS P + + L+ + + G A+ + Q+
Sbjct: 158 VFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQI 217
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
G G P+VY +I+++ C RV VLE M + + PN T LV+G D
Sbjct: 218 VGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGD- 276
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+ E ++R M +++ +V T+L R EA +LR++ + L
Sbjct: 277 FEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELL-------- 328
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
++D + Y +L++ + GR + R + + +
Sbjct: 329 ----------------VVDERV----------YGVLVDGYCQMGRMEDAVRIRDEMLRVG 362
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
L N+ N +I +CK+ + A + M D ++ P+ ++NTL+ G+C++ +V K
Sbjct: 363 LKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAF 422
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
L +L G P T+N++I L ++DAL MVE GV PN I+ ++
Sbjct: 423 MLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCF 482
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
+GD R++ L++++ + FN +I C+M K+ +A F M LGL PD
Sbjct: 483 FKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDE 542
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+Y L K+G EA Q ME+ + N +++ L + + + D++
Sbjct: 543 ITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVE 602
Query: 491 SKERGIS 497
+ RG+S
Sbjct: 603 MQTRGLS 609
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 205/477 (42%), Gaps = 21/477 (4%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILID--------GFCNA 93
+P +Y+IL+H + + EA +++Q+ L N Y + GFC+
Sbjct: 98 RPHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAYAVCNHVFSVYKEFGFCSG 157
Query: 94 ------KRVAE------VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF 141
K AE V + M P + L+ + + + A + +
Sbjct: 158 VFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQI 217
Query: 142 MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
+ + +C+ ++ A +L KM G P T++ V V D
Sbjct: 218 VGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDF 277
Query: 202 NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR-LVSNVNSYNM 260
+L +RGV T +LM K G+ E ++ L V +D LV + Y +
Sbjct: 278 EGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGV 337
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
++D +C++ M+ A I EM + N+V NTLI G+CK +V + + V +++
Sbjct: 338 LVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWN 397
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
KPD +++N+++D CR + A EM+ G+ P +TYN +I+ L +G +L
Sbjct: 398 LKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDAL 457
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
L+ M ++P+ + ++ F +M ++A + +L G +++ +I L
Sbjct: 458 HLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGL 517
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
K G+ EA F M++ G +PD T + + + G +EA I + + +S
Sbjct: 518 CKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMS 574
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 149/352 (42%), Gaps = 35/352 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G + ST +N +I L K + A F +M PD TY L G C+ G V EA
Sbjct: 502 GFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEA 561
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ ME + ++ Y LIDG +++ +V +L M+ R + PN T +L+ G
Sbjct: 562 FQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISG 621
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
KAF L +ER +VC+ ++ L + SEA IL KM D L
Sbjct: 622 WCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAV 681
Query: 185 --------------------SSTFDYTVTC-----------LVTGL----DLNETCGILD 209
+ + D + C + GL L+E +L
Sbjct: 682 HNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLS 741
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+ RG P TY L+ A +G E + + + + L+ N+ YN +I+ CK+
Sbjct: 742 VLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLG 801
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
+DRA + ++ + + PN VT+N LI +C+ ++ K L + E G
Sbjct: 802 NIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGI 853
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 194/411 (47%), Gaps = 36/411 (8%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
G P+ ++ LI G C R+ EV +L +M+ + C + AT +V
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIV------------ 227
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
++ C +R + + + R+M + G P + +
Sbjct: 228 ---------------RVFCQKGRFR--------DVSELFRRMLEMGTPPNVVNYTAWIDG 264
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR-YLNHVFKDRLVS 253
L + + +L+ + +G+KP T+ L+ L K G R +L +
Sbjct: 265 LCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKP 324
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV++Y ++I +CK + RA + M ++ +APN T+ TLISGHCK+ + EL+
Sbjct: 325 NVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELM 384
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ GF+P+ +T+N++ID LC+ + ++A L G+ + +TY ++I C
Sbjct: 385 NKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQ 444
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G + +L LF +M + PDI+T+ LI +C+ ++E+++K F L + L P +Y
Sbjct: 445 GHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTY 504
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+++I K G+ A + F M QNGC DS T ++ L ++ R EEA
Sbjct: 505 TSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEA 555
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 176/419 (42%), Gaps = 44/419 (10%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
PD ++ LI G CR G ++E L+ M+G G+ + T T+++ FC R +V +
Sbjct: 183 PDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSEL 242
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
M E PN + + G L
Sbjct: 243 FRRMLEMGTPPNVVNYTAWIDG-----------------------------------LCK 267
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL-DLNETCGILDTFIK----RGVK 217
+ +A +L +M +G P YT T L+ GL + T F+K K
Sbjct: 268 RAYVKQAFYVLEEMVAKGLKPNV----YTHTSLINGLCKIGWTERAFRLFLKLIKSSSYK 323
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
P TY +++ K G+ + L + + L N N+Y +I CK + A E+
Sbjct: 324 PNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFEL 383
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
+MR PN+ T+N LI G CK ++ + ++L M G + DK T+ MI C+
Sbjct: 384 MNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCK 443
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
ALD + M E G P+ TY LI C + S +LF K A + P T
Sbjct: 444 QGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQT 503
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
+ ++I +C++ K A + F M+ G + D+ +Y ALI L K R +EA+ + M
Sbjct: 504 YTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGM 562
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 141/309 (45%), Gaps = 1/309 (0%)
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G LP++ +F + + E +L +G +T +++ + GR +
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDV 239
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + NV +Y ID CK + +A + EM + + PN+ T +LI+G
Sbjct: 240 SELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLING 299
Query: 300 HCKDAEVHKTRELLVMLLECG-FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
CK + L + L++ +KP+ T+ MI C+ + A L MVE G+ P
Sbjct: 300 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 359
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
NT TY LI C G + L KM+ + P+IYT+NALI C+ KI++A K
Sbjct: 360 NTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVL 419
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
GL+ D +Y+ +I K G A F M +NGC+PD +T ++ QQ
Sbjct: 420 RMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQ 479
Query: 479 GRFEEAHDI 487
+ EE+ +
Sbjct: 480 RQMEESQKL 488
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 182/409 (44%), Gaps = 7/409 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P+ Y A ID L K + A+ ++M KP+ +T+ LI+G+C+IG +
Sbjct: 249 MGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTER 308
Query: 64 ALRL-VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A RL +K ++ Y PNV+TYT++I G+C ++A +L M E+ + PN T +L+
Sbjct: 309 AFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLI 368
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
G + + AFEL+ + M RE + N L+ L EA +LR ++G
Sbjct: 369 SGHCKEGSFNCAFELMNK-MRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGL 427
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+ T+ +T + + + + G P TY L+ + + E +
Sbjct: 428 QLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQK 487
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ LV +Y +I +CKV A + M + +T+ LISG C
Sbjct: 488 LFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLC 547
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K++ + + R L +L+ P + T ++ CR E A+ +S +
Sbjct: 548 KESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRR---EKAVVAVSILDRLDKRRKNH 604
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
T N+L+R L AIG V + +K ++ D + + I S C NK
Sbjct: 605 TVNVLVRKLSAIGHVEDASLFLKKALDVDLAVDRLAYTSFINS-CYANK 652
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 175/424 (41%), Gaps = 34/424 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P R + A+I + ++ M D T +++ C+ G +
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDV 239
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++M +G PNV YT IDG C V + F VLE M + + PN T SL++G
Sbjct: 240 SELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLING 299
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF L ++ ++ Y P
Sbjct: 300 LCKIGWTERAFRLFLKLIK----------------------------------SSSYKPN 325
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L +L +++G+ P +TY L+ K G +N
Sbjct: 326 VHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMN 385
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ N+ +YN +ID CK + A ++ R ++ + + VT+ +I+ HCK
Sbjct: 386 KMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQG 445
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +L + E G PD T+ ++I C+ + E++ + + + P TY
Sbjct: 446 HITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYT 505
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I C +G +LR+F++M + D T+ ALI C+ +++E+A + ML
Sbjct: 506 SMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDK 565
Query: 425 GLRP 428
L P
Sbjct: 566 RLVP 569
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 131/273 (47%), Gaps = 6/273 (2%)
Query: 232 KAGRDVEGDRYLNHVF-----KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+AG D Y VF + L+ + S+ +I C+ M+ + M+ +
Sbjct: 157 RAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGF 216
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
+ T ++ C+ EL +LE G P+ + + ID LC+ + A
Sbjct: 217 CLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFY 276
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM-QADRISPDIYTFNALIQSF 405
L EMV G+ PN T+ LI LC IG R+ RLF K+ ++ P+++T+ +I +
Sbjct: 277 VLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGY 336
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
C+ K+ +AE M+ GL P+ +Y+ LI K G F+ A + M + G P+
Sbjct: 337 CKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNI 396
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
YT N +++ L ++G+ +EA+ +++ + +G+
Sbjct: 397 YTYNALIDGLCKKGKIQEAYKVLRMANNQGLQL 429
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 128/291 (43%), Gaps = 2/291 (0%)
Query: 207 ILDTFIKRG-VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
+ D + RG + P ++ L+ + GR E D L + + + +++ F
Sbjct: 171 VFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVF 230
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C+ +E+ R M + PN+V + I G CK A V + +L ++ G KP+
Sbjct: 231 CQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNV 290
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWG-VPPNTITYNILIRSLCAIGDVARSLRLFQ 384
+T S+I+ LC+ E A ++++ PN TY ++I C G +AR+ L
Sbjct: 291 YTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLG 350
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+M ++P+ T+ LI C+ A + M G +P+ ++Y+ALI L K G
Sbjct: 351 RMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKG 410
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ EA + G D T +++ +QG A D+ E G
Sbjct: 411 KIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENG 461
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 202/413 (48%), Gaps = 6/413 (1%)
Query: 57 RIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEA 116
R G ++AL+L ++ A +V TY +LI GFCNA + F +L M + N+
Sbjct: 3 RAGSHNQALQLFRENPCQLPASSV-TYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDR 61
Query: 117 TVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRK 175
T ++ G+ RC +A E +E +V TL+ L A + RK
Sbjct: 62 TTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRK 121
Query: 176 M-GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
M G P + T++ V L L+ ++ KR P TY LM AL++ G
Sbjct: 122 MVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLG 181
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
R E + ++ V + S+N +I C+ + A E+ EM DRD PNLVT++
Sbjct: 182 RVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYS 241
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
+I G CK ++ + ++LL ++ G +PD + ++ A R + AL L MV
Sbjct: 242 VVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQ 301
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G P+ +TY ++I LC +G V + +F+++ A++ SP++ T++ALI +CR +++++
Sbjct: 302 GCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEG 361
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
K M + RP+ +Y+ +I L R +EA F M + G PD+ T
Sbjct: 362 GKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDART 411
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 164/345 (47%), Gaps = 16/345 (4%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
N L+ N S A ++LR+M G D T + ++ GL CG + ++
Sbjct: 29 NVLIRGFCNASDLDAAFSLLREMDVEGM----QCNDRTTSIILQGL---CRCGRVAQALE 81
Query: 214 R--------GVKPRFSTYLLLMEALYKAGR-DVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
+P +Y L+ L K GR D D + V N +YN ++D
Sbjct: 82 HFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDG 141
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
CK + +D A + E R RD AP++VT+NTL++ + V + + E G+ P
Sbjct: 142 LCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPT 201
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
+FN++I LCRA R DAL+ +EM++ PN +TY+++I LC + + +L
Sbjct: 202 LVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLD 261
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+M ++ PD+ + L+ F +++ A M++ G PD +Y+ +I L K G
Sbjct: 262 RMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVG 321
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
R D+A + F + N C+P+ T + ++ + R +E +++
Sbjct: 322 RVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMR 366
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 185/423 (43%), Gaps = 6/423 (1%)
Query: 20 LVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPN 79
+V++ S + A F++ Q TYN+LI G C +D A L+++M+ G N
Sbjct: 1 MVRAGSHNQALQLFRENPC-QLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59
Query: 80 VYTYTILIDGFCNAKRVAEVFRVLEIMKE-RNVCPNEATVRSLVHGVFRCLDPHKAFELL 138
T +I++ G C RVA+ + E + P+ + +L++G+ + AF+L
Sbjct: 60 DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119
Query: 139 IRFMEREPL-TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVT 197
+ + N L+ L A A++ + R + P+ T++ + L
Sbjct: 120 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQ 179
Query: 198 GLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNS 257
++E + G P ++ ++ L +A R + N + N+ +
Sbjct: 180 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 239
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
Y++VID CK + +D A ++ M P+LV + L+ G + LL ++
Sbjct: 240 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 299
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
G PD T+ +ID LC+ R +DA + E+V PN +TY+ LI C V
Sbjct: 300 SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVD 359
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
++ ++M P++ T+N +I +++ E+A F M G PD +Y L
Sbjct: 360 EGGKVMREMAC---RPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLK 416
Query: 438 KAL 440
+AL
Sbjct: 417 RAL 419
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 139/327 (42%), Gaps = 38/327 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YNA++D L K + +D A + PD TYN L+ + ++G VDEA
Sbjct: 127 GCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEA 186
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L QM GY P + ++ +I G C A+R+A+ V M +R+ PN T ++ G
Sbjct: 187 LATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDG 246
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
L + EA +L +M G P+
Sbjct: 247 -----------------------------------LCKSDQLDEAQQLLDRMVSEGCRPD 271
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ V L+ G+L + +G P TY ++++ L K GR +
Sbjct: 272 LVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFR 331
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ NV +Y+ +I +C+ + +D ++ REM R PN+VT+NT+I G
Sbjct: 332 ELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVD 388
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSM 331
+ + + ECGF PD T+ +
Sbjct: 389 RNEEAYGMFREMSECGFVPDARTYRGL 415
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 131/283 (46%), Gaps = 37/283 (13%)
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREM-------RDRDIA--------------- 287
+L ++ +YN++I FC + +D A + REM DR +
Sbjct: 20 QLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQA 79
Query: 288 --------------PNLVTFNTLISGHCKDAEVHKTRELL-VMLLECGFKPDKFTFNSMI 332
P++V++ TLI+G CK V +L M+ G +P+ FT+N+++
Sbjct: 80 LEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALV 139
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
D LC+ R + A ++E + P+ +TYN L+ +L +G V +L F +M +
Sbjct: 140 DGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYV 199
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
P + +FNA+I CR ++ A + F M+ P+ +YS +I L KS + DEA+Q
Sbjct: 200 PTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQL 259
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
M GC PD ++ GR + A +++ +G
Sbjct: 260 LDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQG 302
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 222/499 (44%), Gaps = 8/499 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +T N++++ V AY F+ V +PD FTY LI G C+ + +A
Sbjct: 12 GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M+ G P + T+ LI C + ++ M + V P+ ++
Sbjct: 72 VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A R ++ L K+ L++ L + I +M +G+ PE
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ V +++ ++ G P S Y L++ L K R E
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE 251
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
D V +V Y I CK +D A + +M + AP+ V++N +I CKD
Sbjct: 252 MAAGD--VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDN 309
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG-VPPNTITY 363
V + +EL+ +E P ++D LC++ R E+A L M+E G P+ +TY
Sbjct: 310 RVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTY 369
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+ +I LC + + + QKM+ PD+ T+ A+I +FC++ ++++A + F M
Sbjct: 370 SAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHE 429
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G D +Y+ LI+ ++ + DEA M G P+ + + I++ L ++ R EE
Sbjct: 430 RGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEE 489
Query: 484 AHDIVKTSKERGISFKSFP 502
A +++ ++F+S P
Sbjct: 490 ARLLMEK-----MNFESLP 503
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 191/393 (48%), Gaps = 6/393 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ + P LY VI L K N +DLA F++M C PD+ TY +L+H + + ++
Sbjct: 116 MKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQ 175
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
++ ++M G++P + TY +++G+C A R+ + ++ +K P+ + +L+
Sbjct: 176 GHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLID 235
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +A EL M + +V + + L EA A+ KM + G P
Sbjct: 236 GLCKHDRHDEARELF--EMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAP 293
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ +++ + L ++E ++D ++R P +L++ L K+ R E L
Sbjct: 294 DPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVIL 353
Query: 244 NHVFK--DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + DR S V +Y+ VID CK + +D A + ++MR P++VT+ +I C
Sbjct: 354 ERMLETGDRAPSVV-TYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFC 412
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + + REL + E G D +N +I CRA + ++A+ + EM G+ PN +
Sbjct: 413 KVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVV 472
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
+ + ++ LC V + L +KM + + PD
Sbjct: 473 SLSTIVDGLCKESRVEEARLLMEKMNFESL-PD 504
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
+P TY L+ KA + + L + + + ++ +I C++N D+A +
Sbjct: 49 RPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQ 108
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
I +M D + P+ + +I CK ++ +++ G PDK T+ ++ L
Sbjct: 109 IFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLF 168
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
+A ++E EM+ G P +TY ++ C G + ++L L ++++ SP
Sbjct: 169 KACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGS 228
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
++ LI C+ ++ ++A + F + G D Y++ I L K+G+ DEAK + M
Sbjct: 229 LYSTLIDGLCKHDRHDEARELF--EMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKM 286
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFPGL 504
+ GC PD + N+I+ +L + R EA +++ + ER K PG+
Sbjct: 287 IEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMER----KCMPGV 330
>gi|8778411|gb|AAF79419.1|AC025808_1 F18O14.1 [Arabidopsis thaliana]
Length = 689
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 142/512 (27%), Positives = 233/512 (45%), Gaps = 34/512 (6%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ +T + N++I+ KS + A F +M+ KPD TYN L+ G CR G VDE
Sbjct: 145 IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDE 204
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL+L QM P V TY IL+ G+ +V + ++M +R V +E + +L+
Sbjct: 205 ALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLE 264
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+F+ D ++A +L + R LT + N ++ L +EA IL + P
Sbjct: 265 ALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKP 324
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ +L E + + ++G+ P Y L+ +K R+L
Sbjct: 325 AVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKY-------RHL 377
Query: 244 NHV------FKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
N V + R L V +Y +I +C + M+D+A C EM ++ I N+ + +
Sbjct: 378 NKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKI 437
Query: 297 ISGHCKDAEVHKTRELLVM-----LLECGFKPDK-FTFNSMIDCLCRAHRFEDALDCLSE 350
+ + ++ + LL LL G++ K F S CL + + ++E
Sbjct: 438 ANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCL-KTQK-------IAE 489
Query: 351 MVEWGVP-----PNTITYNILIRSLCAIGDVARSLRLFQK-MQADRISPDIYTFNALIQS 404
VE P PN I YN+ I LC G + + +LF + +DR PD YT+ LI
Sbjct: 490 SVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHG 549
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
I KA M G+ P+ +Y+ALIK L K G D A++ + Q G P+
Sbjct: 550 CAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPN 609
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ T N +++ LV+ G EA + + E+G+
Sbjct: 610 AITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 641
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 205/452 (45%), Gaps = 6/452 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKPDRFTYNILIHGICRIG 59
ISF +SP + V++A +S ++D A + ++ S + + TYN LI+G IG
Sbjct: 2 ISF-EVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIG 60
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
V+ R+++ M G + NV TYT LI G+C + E V E++KE+ + ++
Sbjct: 61 DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYG 120
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
L+ G R A + +E T +CN+L+ + EA I +M D
Sbjct: 121 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDW 180
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
P+ T++ V ++E + D ++ V P TY +L++ + G +
Sbjct: 181 SLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDV 240
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ K + ++ S + +++ K+ + A ++ + R + + +T N +ISG
Sbjct: 241 LSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISG 300
Query: 300 HCKDAEVHKTRELL--VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
CK +V++ +E+L V + C KP T+ ++ + ++A M G+
Sbjct: 301 LCKMEKVNEAKEILDNVNIFRC--KPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIF 358
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P YN LI + + L +++A ++P + T+ ALI +C + I+KA
Sbjct: 359 PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYAT 418
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
F M+ G+ + S + +L + + DEA
Sbjct: 419 CFEMIEKGITLNVNICSKIANSLFRLDKIDEA 450
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 189/449 (42%), Gaps = 7/449 (1%)
Query: 40 QCKPDRFTYNILIHGICRIGVVDEALRLVKQME-GLGYAPNVYTYTILIDGFCNAKRVAE 98
+ PD FT +I+++ CR G VD+A+ K+ E LG NV TY LI+G+ V
Sbjct: 5 EVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEG 64
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFR---CLDPHKAFELLIRFMEREPLTQKLVCNT 155
+ RVL +M ER V N T SL+ G + + FELL E++ + + +
Sbjct: 65 MTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELL---KEKKLVADQHMYGV 121
Query: 156 LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRG 215
L+ +A + M + G ++ + + L E I
Sbjct: 122 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 181
Query: 216 VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT 275
+KP TY L++ +AG E + + + + +V V +YN+++ + ++
Sbjct: 182 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVL 241
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
+ + M R + + ++ +TL+ K + ++ +L +L G D T N MI L
Sbjct: 242 SLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGL 301
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
C+ + +A + L + + P TY L +G++ + + + M+ I P I
Sbjct: 302 CKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTI 361
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
+N LI + + K + GL P +Y ALI G D+A T
Sbjct: 362 EMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFE 421
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEA 484
M + G + + I +L + + +EA
Sbjct: 422 MIEKGITLNVNICSKIANSLFRLDKIDEA 450
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 121/243 (49%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV +YN +I+ + + ++ T + R M +R ++ N+VT+ +LI G+CK + + +
Sbjct: 45 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 104
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+L E D+ + ++D CR + DA+ M+E GV NT N LI C
Sbjct: 105 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 164
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G + + ++F +M + PD +T+N L+ +CR +++A K M + P +Y
Sbjct: 165 GQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTY 224
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ L+K + G F + + M + G N D + + +LE L + G F EA + +
Sbjct: 225 NILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLA 284
Query: 494 RGI 496
RG+
Sbjct: 285 RGL 287
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 137/275 (49%), Gaps = 2/275 (0%)
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDR 273
G++ TY L+ G DVEG + + +R VS NV +Y +I +CK +M+
Sbjct: 41 GLELNVVTYNSLINGYAMIG-DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEE 99
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + ++++ + + + L+ G+C+ ++ + ++E G + + NS+I+
Sbjct: 100 AEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLIN 159
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
C++ + +A S M +W + P+ TYN L+ C G V +L+L +M + P
Sbjct: 160 GYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVP 219
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
+ T+N L++ + R+ + ML G+ D S S L++AL K G F+EA + +
Sbjct: 220 TVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLW 279
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
++ G D+ T N+++ L + + EA +I+
Sbjct: 280 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEIL 314
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 143/296 (48%), Gaps = 4/296 (1%)
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+L +RGV TY L++ K G E + + + +LV++ + Y +++D +C
Sbjct: 68 VLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYC 127
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
+ + A + M + + N N+LI+G+CK ++ + ++ + + KPD
Sbjct: 128 RTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHH 187
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+N+++D CRA ++AL +M + V P +TYNIL++ IG L L++ M
Sbjct: 188 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 247
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
++ D + + L+++ ++ +A K + ++L GL D + + +I L K +
Sbjct: 248 LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKV 307
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFP 502
+EAK+ ++ C P T + + G +EA + + + +GI FP
Sbjct: 308 NEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGI----FP 359
>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
Length = 795
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/526 (24%), Positives = 225/526 (42%), Gaps = 40/526 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSV-------------------------- 38
G+ P YN+V+D LVK +D A QM +
Sbjct: 253 GLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGK 312
Query: 39 ----------DQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILID 88
D P TY +LI G G+ DE +L +QM G P+ Y + ++I
Sbjct: 313 ALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIK 372
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
G K+ + + +++ + V P+ T L+H + + H+A L + E
Sbjct: 373 GLLRNKQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKP 431
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
+ C++LL EA + +M +G+ P T+ + + ++ +L
Sbjct: 432 SIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALL 491
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ + GV TY +L+ L R E D L + V +YN +I+ F K
Sbjct: 492 NEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKA 551
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
MM A + R+M ++ I PN+VT+ + I G+C+ +LL+ + G PD +
Sbjct: 552 GMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAY 611
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N+ I+ C+ AL L +++ G+ PN YN + + +A + + + M
Sbjct: 612 NAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIK 671
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
RI+ D + LI F ++ + A + + ML PD+ +++AL L +SG D
Sbjct: 672 QRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDG 731
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA---HDIVKTS 491
AK+ M + P++ T N+++ ++ G+ +EA HD + +S
Sbjct: 732 AKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSS 777
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 212/471 (45%), Gaps = 12/471 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G ++Y+ V+ A V A F +M+ KPD Y I I G+C++ D A
Sbjct: 183 GYYADAKMYDVVMRACVVGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRA 242
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM-----KERNVCPNEATVR 119
++++ +M G P +TY ++D R+ E R+ + M K+ +V
Sbjct: 243 VQVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVF----LAT 298
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN-NSMASEAAAILRKMGD 178
+L+ G + KA +L + R+ +T V T+L + + M E + R+M +
Sbjct: 299 TLMQGYCLHGEIGKALDLFDEAV-RDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIE 357
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+G LP + F+ + L+ + + D + GV P TY L+ L K + E
Sbjct: 358 QGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHE 416
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + + ++ + + ++ +C+ MD A ++ EM + PN VT+ TL+
Sbjct: 417 AVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMK 476
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G+ K K LL + + G ++T+N +I+ LC R + + L V G P
Sbjct: 477 GYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVP 536
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
T+TYN +I G + +L ++++M I+P+I T+ + I +CR N + A K
Sbjct: 537 TTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLL 596
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
M G+ PD +Y+A I K G A + + ++G P+ N
Sbjct: 597 IYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYN 647
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 187/443 (42%), Gaps = 12/443 (2%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
+ +M PD + L+ R +AL L +M GY + Y +++
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVV 200
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
+ + R+ + M V P+E + G+ + D +A ++L + E +
Sbjct: 201 GRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFT 260
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD-YTVTCLVTGLDLNETCG----I 207
N+++ L EA ++ D+ L D + T L+ G L+ G +
Sbjct: 261 YNSVVDVLVKVGRMDEAL----RLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDL 316
Query: 208 LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
D ++ GV P TY +L++ G E + + + L+ + +N+VI +
Sbjct: 317 FDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLR 376
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+ A + + D + P++ T+ LI K +VH+ L + E G KP T
Sbjct: 377 NKQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVT 435
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+S++ C ++AL SEM G PPN +TY L++ ++ L +M
Sbjct: 436 CHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMH 495
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ +S YT+N LI C ++++ + ++ ++ G P +Y+++I +K+G
Sbjct: 496 QNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMG 555
Query: 448 EAKQTFLSMEQNGCNPD--SYTS 468
A + M + G P+ +YTS
Sbjct: 556 SALAMYRQMCEKGITPNIVTYTS 578
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 9/183 (4%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV-AR 378
G PD + ++ R DAL EM G + Y++++R+ C +G +
Sbjct: 148 GVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRA-CVVGRMHGD 206
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
++RLF +M + PD + I C++ ++A + M GL+P +F+Y++++
Sbjct: 207 AVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVVD 266
Query: 439 ALIKSGRFDEA----KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
L+K GR DEA Q L+ G D + + +++ G +A D+ +
Sbjct: 267 VLVKVGRMDEALRLKDQMLLA---TGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRD 323
Query: 495 GIS 497
G++
Sbjct: 324 GVT 326
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 94/240 (39%), Gaps = 36/240 (15%)
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M R + P+ + L+ + A L + G+ D ++ ++
Sbjct: 144 MVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVVGRM 203
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
DA+ EM GV P+ Y I I LC + D R++++ KM+ + P +T+N+
Sbjct: 204 HGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNS 263
Query: 401 ------------------------------------LIQSFCRMNKIEKAEKAFFSMLTL 424
L+Q +C +I KA F +
Sbjct: 264 VVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRD 323
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ P N +Y+ LIK G DE + M + G P +Y NL+++ L++ ++E+A
Sbjct: 324 GVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDA 383
>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g19290
gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 142/512 (27%), Positives = 231/512 (45%), Gaps = 34/512 (6%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ +T + N++I+ KS + A F +M+ KPD TYN L+ G CR G VDE
Sbjct: 360 IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDE 419
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL+L QM P V TY IL+ G+ +V + ++M +R V +E + +L+
Sbjct: 420 ALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLE 479
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+F+ D ++A +L + R LT + N ++ L +EA IL + P
Sbjct: 480 ALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKP 539
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ +L E + + ++G+ P Y L+ +K R+L
Sbjct: 540 AVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKY-------RHL 592
Query: 244 NHV------FKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
N V + R L V +Y +I +C + M+D+A C EM ++ I N+ + +
Sbjct: 593 NKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKI 652
Query: 297 ISGHCKDAEVHKTRELLVM-----LLECGFKPDK-FTFNSMIDCLCRAHRFEDALDCLSE 350
+ + ++ + LL LL G++ K F S CL ++E
Sbjct: 653 ANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCL--------KTQKIAE 704
Query: 351 MVEWGVP-----PNTITYNILIRSLCAIGDVARSLRLFQK-MQADRISPDIYTFNALIQS 404
VE P PN I YN+ I LC G + + +LF + +DR PD YT+ LI
Sbjct: 705 SVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHG 764
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
I KA M G+ P+ +Y+ALIK L K G D A++ + Q G P+
Sbjct: 765 CAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPN 824
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ T N +++ LV+ G EA + + E+G+
Sbjct: 825 AITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 205/452 (45%), Gaps = 6/452 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKPDRFTYNILIHGICRIG 59
ISF +SP + V++A +S ++D A + ++ S + + TYN LI+G IG
Sbjct: 217 ISF-EVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIG 275
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
V+ R+++ M G + NV TYT LI G+C + E V E++KE+ + ++
Sbjct: 276 DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYG 335
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
L+ G R A + +E T +CN+L+ + EA I +M D
Sbjct: 336 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDW 395
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
P+ T++ V ++E + D ++ V P TY +L++ + G +
Sbjct: 396 SLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDV 455
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ K + ++ S + +++ K+ + A ++ + R + + +T N +ISG
Sbjct: 456 LSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISG 515
Query: 300 HCKDAEVHKTRELL--VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
CK +V++ +E+L V + C KP T+ ++ + ++A M G+
Sbjct: 516 LCKMEKVNEAKEILDNVNIFRC--KPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIF 573
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P YN LI + + L +++A ++P + T+ ALI +C + I+KA
Sbjct: 574 PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYAT 633
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
F M+ G+ + S + +L + + DEA
Sbjct: 634 CFEMIEKGITLNVNICSKIANSLFRLDKIDEA 665
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 192/456 (42%), Gaps = 7/456 (1%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME-GLGYAPNVYTYTILIDGFC 91
+ QM + PD FT +I+++ CR G VD+A+ K+ E LG NV TY LI+G+
Sbjct: 213 YDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYA 272
Query: 92 NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR---CLDPHKAFELLIRFMEREPLT 148
V + RVL +M ER V N T SL+ G + + FELL E++ +
Sbjct: 273 MIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELL---KEKKLVA 329
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
+ + L+ +A + M + G ++ + + L E I
Sbjct: 330 DQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIF 389
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+KP TY L++ +AG E + + + + +V V +YN+++ + ++
Sbjct: 390 SRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRI 449
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+ + M R + + ++ +TL+ K + ++ +L +L G D T
Sbjct: 450 GAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITL 509
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N MI LC+ + +A + L + + P TY L +G++ + + + M+
Sbjct: 510 NVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMER 569
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
I P I +N LI + + K + GL P +Y ALI G D+
Sbjct: 570 KGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDK 629
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
A T M + G + + I +L + + +EA
Sbjct: 630 AYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEA 665
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 121/243 (49%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV +YN +I+ + + ++ T + R M +R ++ N+VT+ +LI G+CK + + +
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+L E D+ + ++D CR + DA+ M+E GV NT N LI C
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 379
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G + + ++F +M + PD +T+N L+ +CR +++A K M + P +Y
Sbjct: 380 GQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTY 439
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ L+K + G F + + M + G N D + + +LE L + G F EA + +
Sbjct: 440 NILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLA 499
Query: 494 RGI 496
RG+
Sbjct: 500 RGL 502
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/438 (20%), Positives = 196/438 (44%), Gaps = 5/438 (1%)
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRV--AEVFRVLEIMKERNVCPNEATVRSL 121
AL + QM +P+V+T +I+++ +C + V A VF E + N T SL
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVF-AKETESSLGLELNVVTYNSL 267
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRG 180
++G + + + ++R M +++ +V T L + + EA + + ++
Sbjct: 268 ING-YAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKK 326
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ + + + + + + D I+ GV+ + L+ K+G+ VE +
Sbjct: 327 LVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAE 386
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + L + ++YN ++D +C+ +D A ++C +M +++ P ++T+N L+ G+
Sbjct: 387 QIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGY 446
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ H L M+L+ G D+ + +++++ L + F +A+ ++ G+ +T
Sbjct: 447 SRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDT 506
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
IT N++I LC + V + + + R P + T+ AL + ++ +++A
Sbjct: 507 ITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEY 566
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G+ P Y+ LI K ++ + + G P T ++ G
Sbjct: 567 MERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGM 626
Query: 481 FEEAHDIVKTSKERGISF 498
++A+ E+GI+
Sbjct: 627 IDKAYATCFEMIEKGITL 644
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 145/303 (47%), Gaps = 4/303 (1%)
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
D+ +L +RGV TY L++ K G E + + + +LV++ + Y
Sbjct: 276 DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYG 335
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
+++D +C+ + A + M + + N N+LI+G+CK ++ + ++ + +
Sbjct: 336 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDW 395
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
KPD T+N+++D CRA ++AL +M + V P +TYNIL++ IG
Sbjct: 396 SLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDV 455
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
L L++ M ++ D + + L+++ ++ +A K + ++L GL D + + +I
Sbjct: 456 LSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISG 515
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
L K + +EAK+ ++ C P T + + G +EA + + + +GI
Sbjct: 516 LCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGI--- 572
Query: 500 SFP 502
FP
Sbjct: 573 -FP 574
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/228 (18%), Positives = 88/228 (38%), Gaps = 56/228 (24%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE--------WG--------VPPNTITYN 364
F+PD + M+ L RA ++ L E+V WG + ++
Sbjct: 100 FRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSPTVFD 159
Query: 365 ILIRSLCAIGDVARSLRLF-----------------------------------QKMQAD 389
++++ G V +L +F +M +
Sbjct: 160 MILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISF 219
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT---LGLRPDNFSYSALIKALIKSGRF 446
+SPD++T + ++ ++CR ++KA F+ T LGL + +Y++LI G
Sbjct: 220 EVSPDVFTCSIVVNAYCRSGNVDKA--MVFAKETESSLGLELNVVTYNSLINGYAMIGDV 277
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
+ + M + G + + T +++ ++G EEA + + KE+
Sbjct: 278 EGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEK 325
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 203/423 (47%), Gaps = 4/423 (0%)
Query: 25 SIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYT 84
+I+ A F M P ++ L+ + RI L L K++E L +V+ +
Sbjct: 64 NIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFN 123
Query: 85 ILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH--KAFELLIRFM 142
ILI+ F +RV F VL + + P+ T SL++G+ C + +A E +
Sbjct: 124 ILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGL--CFEDKFARAMEFFDEMV 181
Query: 143 EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
NT++ + A +L+KM G P+ ++ + L ++
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVS 241
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
E I +GV+P TY +LM L + + E N + ++ +V ++N+++
Sbjct: 242 EALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILV 301
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
D CK M+ A I + M ++ + PN T+N+L++G+C +V + R + ++ G
Sbjct: 302 DKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCM 361
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P+ ++N +I+ C+A R ++A + EM G+ PNT YN LI LC G + L
Sbjct: 362 PNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAREL 421
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
F+ MQA SPD+ T L+ S C++ ++ A + F +M L+P+ +Y LI+A+ K
Sbjct: 422 FKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYK 481
Query: 443 SGR 445
SG+
Sbjct: 482 SGK 484
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 173/375 (46%), Gaps = 35/375 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P ++++I+ L + A F +M +P+ TYN +I G C+IG
Sbjct: 148 LGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTV 207
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+K+M+ G P++ Y +IDG C + V+E + +K + V P+ T L+H
Sbjct: 208 AVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMH 267
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G L N+ EA+A+ +M +P
Sbjct: 268 G-----------------------------------LCNSDQKEEASALFNEMMSLNIMP 292
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF+ V L L+E GI+ I++GV+P ++TY LM + E
Sbjct: 293 DVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVF 352
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + NV SYN++I+ +CK +D A E+ EM R + PN +NTLISG C+
Sbjct: 353 DAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQA 412
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ REL + G PD T ++D LC+ ++AL M + + PN +TY
Sbjct: 413 GRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTY 472
Query: 364 NILIRSLCAIGDVAR 378
+ILIR++ G + R
Sbjct: 473 DILIRAMYKSGKIYR 487
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 154/316 (48%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A ++L K+ G+ P++ TF + L D + G +P TY +++
Sbjct: 138 AFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIK 197
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
K G+ L + K ++ YN +ID CK ++ A +I E++ + + P
Sbjct: 198 GFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRP 257
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
++ T++ L+ G C + + L ++ PD TFN ++D LC+ +A +
Sbjct: 258 DVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGII 317
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
M+E GV PN TYN L+ C V + +F M P++ ++N LI +C+
Sbjct: 318 KIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKA 377
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+I++A + F M GL P+ F+Y+ LI L ++GR EA++ F M+ GC+PD T
Sbjct: 378 QRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTC 437
Query: 469 NLILETLVQQGRFEEA 484
++L++L + G + A
Sbjct: 438 TILLDSLCKLGYLDNA 453
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 157/310 (50%)
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
F+ + C ++ +L IK G +P T+ L+ L + + + +
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
N+++YN +I FCK+ A + ++M P++V +NT+I G CKD V
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVS 241
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ ++ + G +PD FT++ ++ LC + + E+A +EM+ + P+ +T+NIL+
Sbjct: 242 EALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILV 301
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G ++ + + + M + P+ T+N+L+ +C NK+ +A F +M+T G
Sbjct: 302 DKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCM 361
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P+ SY+ LI K+ R DEA++ F M G P+++ N ++ L Q GR EA ++
Sbjct: 362 PNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAREL 421
Query: 488 VKTSKERGIS 497
K + +G S
Sbjct: 422 FKDMQAQGCS 431
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 123/254 (48%)
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
NH+ + + ++ ++ ++ + + + I ++ FN LI+ +
Sbjct: 72 FNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSR 131
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
V +L +++ GF+PD TF+S+I+ LC +F A++ EMV G PN T
Sbjct: 132 LQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHT 191
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN +I+ C IG ++ L +KM PDI +N +I C+ + +A F +
Sbjct: 192 YNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIK 251
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G+RPD F+YS L+ L S + +EA F M PD T N++++ L ++G
Sbjct: 252 GKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLS 311
Query: 483 EAHDIVKTSKERGI 496
EA I+K E+G+
Sbjct: 312 EAQGIIKIMIEKGV 325
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 128/246 (52%)
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
R+ +V +N++I+CF ++ +D A + ++ P+ VTF++LI+G C + + +
Sbjct: 114 RIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARA 173
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
E ++ G++P+ T+N++I C+ + A+ L +M + G P+ + YN +I
Sbjct: 174 MEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDG 233
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
LC V+ +L +F +++ + PD++T++ L+ C ++ E+A F M++L + PD
Sbjct: 234 LCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPD 293
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+++ L+ L K G EA+ M + G P+ T N ++ Q + EA +
Sbjct: 294 VVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFD 353
Query: 490 TSKERG 495
+G
Sbjct: 354 AMITKG 359
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%)
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
C EDAL + M+ P + ++ L+ +L I L L ++++ RI D+
Sbjct: 60 CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
+ FN LI F R+ +++ A ++ LG PD ++S+LI L +F A + F
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
M +G P+ +T N I++ + G+ A ++K + G
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAG 219
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/493 (23%), Positives = 222/493 (45%), Gaps = 38/493 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + +++ + K D+ + + D +T N+L++ C+ A
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LG+ P++ T+T LI+GFC R+ E ++ M E + P+
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDV------------ 177
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
++ T++ L N + A ++ +M + G P+
Sbjct: 178 -----------------------VMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVM 214
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ V L + +L KR +KP T+ L++A K G+ ++ + N +
Sbjct: 215 YTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ + N+ +Y +I+ FC +D A ++ M + P++V + +LI+G CK +V
Sbjct: 275 RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVD 334
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
++ + + G + T+ ++I + + A + S MV GVPPN TYN+L+
Sbjct: 335 DAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Query: 368 RSLCAIGDVARSLRLFQKMQA---DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LC G V ++L +F+ MQ D ++P+I+T+N L+ C K+EKA F M
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ +Y+ +I+ + K+G+ A F S+ G P+ T ++ L ++G EA
Sbjct: 455 EMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEA 514
Query: 485 HDIVKTSKERGIS 497
H + + KE G+S
Sbjct: 515 HVLFRKMKEDGVS 527
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 151/330 (45%)
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
+EA + M + LP F + + + + D GV T LL
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
M ++ + +L + K ++ ++ +I+ FC N M+ A + +M + I
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P++V + T+I CK+ V+ L + G +PD + S+++ LC + R+ DA
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L M + + P+ IT+N LI + G + L+ +M I+P+I+T+ +LI FC
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+++A + F+ M T G PD +Y++LI K + D+A + F M Q G ++
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGI 496
T +++ Q G+ A ++ RG+
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGV 383
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 176/395 (44%), Gaps = 9/395 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P + ++I+ N ++ A QM KPD Y +I +C+ G V+
Sbjct: 136 LGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNY 195
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L QME G P+V YT L++G CN+ R + +L M +R + P+ T +L+
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 124 GVF---RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ LD + + +IR M P +L+ EA + M +G
Sbjct: 256 AFVKEGKFLDAEELYNEMIR-MSIAP--NIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ + + +++ I ++G+ TY L++ + G+
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD---IAPNLVTFNTLI 297
+H+ + N+ +YN+++ C C + +A I +M+ R+ +APN+ T+N L+
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G C + ++ K + + + T+ +I +C+A + ++A++ + GV
Sbjct: 433 HGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVK 492
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
PN +TY +I L G + LF+KM+ D +S
Sbjct: 493 PNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/502 (24%), Positives = 209/502 (41%), Gaps = 38/502 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN +ID + I L +M P TY +IH + R G + +
Sbjct: 111 GCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKV 170
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M G +PNV Y +I+ C + ++ +L M + P+ T +++ G
Sbjct: 171 ESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAG 230
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R D +A +LL + R +L L++ A A+ +L +M RG+ P+
Sbjct: 231 FCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPD 290
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T + LV +N+ + + +R V P
Sbjct: 291 MITLGALIHGLVVSGQVNDALIVREKMAERQVMP-------------------------- 324
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ N YN++I CK M+ A + EM ++ + P+ + TLI G +
Sbjct: 325 ---------DANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSD 375
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ R++ + E PD +N MI C+ ++A+ C+S M + G P+ TY
Sbjct: 376 KLSDARKIFEFMEEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYT 434
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ GD++ SLRL M R P+I+T+ +LI +C + AE F M +
Sbjct: 435 TLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSE 494
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV--QQGRFE 482
GL P+ Y+ LI +L K + +A F M N C P+ T + ++ LV + G
Sbjct: 495 GLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVN 554
Query: 483 EAHDIVKTSKERGISFKSFPGL 504
K + E+ F GL
Sbjct: 555 SNRSDTKQAHEKSALLDVFRGL 576
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 212/478 (44%), Gaps = 51/478 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP+ ++YN VI+AL K S A QM + PD T+N +I G CR G V EA
Sbjct: 181 GLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREA 240
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L+++ G PN +YT LI GFC +L M R P+ T+ +L+HG
Sbjct: 241 LKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHG 300
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
L + ++A + KM +R +P+
Sbjct: 301 -----------------------------------LVVSGQVNDALIVREKMAERQVMPD 325
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ ++ ++ L L+ +L+ +++ V+P Y L++ ++ + + R +
Sbjct: 326 ANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDK-LSDARKIF 384
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+++ ++ +YN++I +CK MM A MR P+ T+ TL+ G+ K
Sbjct: 385 EFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKG 444
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + LL +++ KP+ FT+ S+I C A D ++M G+ PN + Y
Sbjct: 445 DISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYT 504
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF--CRMNKI--------EKA 414
+LI SL V ++ F+ M + P+ T + L+ CR + +
Sbjct: 505 VLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAH 564
Query: 415 EKA-----FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
EK+ F +++ GL P +Y+A+I +L + +A M GC PD T
Sbjct: 565 EKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPIT 622
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 154/328 (46%), Gaps = 1/328 (0%)
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
E ++ G +P + ++ + D+ +L +G+ P TY ++
Sbjct: 99 EGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAII 158
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
L + G + + L + L NV YN VI+ CK +A+++ +M
Sbjct: 159 HWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFN 218
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
P++VTFNT+I+G C++ +V + +LL + G +P++ ++ +I C A D
Sbjct: 219 PDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDL 278
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
L EM+ G P+ IT LI L G V +L + +KM ++ PD +N LI C+
Sbjct: 279 LVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCK 338
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ A+ ML ++PD F Y+ LI ++S + +A++ F ME+ C PD
Sbjct: 339 KRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVA 397
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERG 495
N++++ + G +EA + + ++ G
Sbjct: 398 YNVMIKGYCKFGMMKEAVTCMSSMRKAG 425
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 170/399 (42%), Gaps = 36/399 (9%)
Query: 81 YTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIR 140
Y+ +++ G C RV E ++E P L+ G R D + LL+
Sbjct: 82 YSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGL-LLLG 140
Query: 141 FMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLD 200
ME T+ ++ + Y AI+ +G +G D
Sbjct: 141 EME----TKGIIPTVVTY-----------GAIIHWLGRKG-------------------D 166
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
L + +L RG+ P Y ++ AL K + LN + K R +V ++N
Sbjct: 167 LTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNT 226
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
+I FC+ + A ++ RE R + PN +++ LI G C E +LLV ++ G
Sbjct: 227 MIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRG 286
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
PD T ++I L + + DAL +M E V P+ YN+LI LC ++ +
Sbjct: 287 HTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAK 346
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
L ++M ++ PD + + LI F R +K+ A K F + PD +Y+ +IK
Sbjct: 347 NLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARK-IFEFMEEKACPDIVAYNVMIKGY 405
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
K G EA SM + GC PD +T +++ ++G
Sbjct: 406 CKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKG 444
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 136/293 (46%), Gaps = 1/293 (0%)
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ ++ G +ST +++ L GR EG + + + V YN++ID +C+
Sbjct: 71 EMLVREGGADDYST-CVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRR 129
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+ R + EM + I P +VT+ +I + ++ K LL + G P+ +
Sbjct: 130 GDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIY 189
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N++I+ LC+ A D L++MV+ P+ +T+N +I C GDV +L+L ++
Sbjct: 190 NTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIR 249
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ P+ ++ LI FC + A M+ G PD + ALI L+ SG+ ++
Sbjct: 250 RGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVND 309
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
A M + PD+ N+++ L ++ A ++++ E+ + F
Sbjct: 310 ALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKF 362
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 173/423 (40%), Gaps = 28/423 (6%)
Query: 5 GISPSTRLYNAVIDAL-VKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G+ P+ Y +I V+ ++ + L + M PD T LIHG+ G V++
Sbjct: 251 GLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGH-TPDMITLGALIHGLVVSGQVND 309
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL + ++M P+ Y +LI G C + ++ +LE M E+ V P++ +L+
Sbjct: 310 ALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLID 369
Query: 124 GVFRC---LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
G R D K FE FME + + N ++ M EA + M G
Sbjct: 370 GFVRSDKLSDARKIFE----FMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAG 425
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P+ T+ V D++ + +L +KR KP TY L+ G +
Sbjct: 426 CIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAE 485
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG- 299
+ + L NV Y ++I K + + +A M PN T + L++G
Sbjct: 486 DLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGL 545
Query: 300 -HCKDAEVHKTR-------------ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
+C+ V+ R ++ L+ G P +N++I LCR + A+
Sbjct: 546 VNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAM 605
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL----FQKMQADRISPDIYTFNAL 401
D +M G P+ IT+ L+ + G+ + FQ+ + + I+ + FN
Sbjct: 606 DLKDKMSNKGCLPDPITFLSLLYGFSSAGESGKWRSALPNEFQQDEFEIITKYMALFNQH 665
Query: 402 IQS 404
+ S
Sbjct: 666 VTS 668
>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 628
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 201/478 (42%), Gaps = 69/478 (14%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+TR + ++ L I A F+ M V C+P T +LI G+CR G A
Sbjct: 172 GYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNA 231
Query: 65 LRLVKQME------GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
L+L + M G+ P V +Y+ +ID C V MKE+ + PN T
Sbjct: 232 LKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTY 291
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
SL+HG L + S EA + +M D
Sbjct: 292 TSLLHG-----------------------------------LCSASEWEEAKRLFIEMVD 316
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G LP+ TF + L + E G+ D ++R V+P TY +L+E AG E
Sbjct: 317 HGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDE 376
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT------ 292
G + + R + SY++++ +CK + + A + REM DR I P ++T
Sbjct: 377 GKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYSKVGD 436
Query: 293 ----------------------FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+N + G CK+ V + ++ L C F + FNS
Sbjct: 437 ARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNS 496
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I+ +CR+ + E A + + + + P+ +TY I+I LC +G ++ LF +M+
Sbjct: 497 LINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKG 556
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+P++ TFN L++ C ++ K + M L PD + ++ L+K + E
Sbjct: 557 CAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDASTLLIVMDILLKDENYHE 614
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 217/480 (45%), Gaps = 23/480 (4%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ +N + AL K +M+ + + NIL++ +C + V E
Sbjct: 104 TPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNILLNCLCSVKRVFEGFV 163
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+ + GY PN T+T L+ G C ++ E RV +IM + P+ T L+ G+
Sbjct: 164 VFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLC 223
Query: 127 RCLDPHKAFELLIRFMER--------EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
R + A +L + +P C ++ L + + A +M +
Sbjct: 224 RTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSC--IIDSLCKDGLVERAKEFFVEMKE 281
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+G P T+ + L + + E + + G+ P T+ +L+ AL K G+ E
Sbjct: 282 KGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKE 341
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + + + +YN++I+ +C M+D +I M ++ + +++ L+
Sbjct: 342 ASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMK 401
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC--LCRAHRFED-ALDCLSEMVEWG 355
+CKD+EVH L +++ G +P T++ + D L +F+D LD +S +
Sbjct: 402 AYCKDSEVHGAMILYREMMDRGIQPTVITYSKVGDARKLFGEIQFQDMVLDSISYSI--- 458
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
YN+ + LC G V+ +L +F ++ + + ++ FN+LI CR K+E A
Sbjct: 459 -------YNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAW 511
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ F + L+PD +Y+ +I L K G+ +A FL ME+ GC P+ T N ++ L
Sbjct: 512 ELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGL 571
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 194/458 (42%), Gaps = 77/458 (16%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F QM Q P +N L + + + + +M +G N + IL++ C+
Sbjct: 95 FNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNILLNCLCS 154
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
KRV E F V ++ + PN T +LV G+ CL+
Sbjct: 155 VKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGL--CLE---------------------- 190
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
EA + + MG FD C + + TCG+L + +
Sbjct: 191 -----------GKIGEAVRVFKIMG---------VFD----CRPSAI----TCGVLISGL 222
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
R L L EA+ D F V SY+ +ID CK +++
Sbjct: 223 CR--TGNTCNALKLHEAMINGNSD----------FGINCKPTVVSYSCIIDSLCKDGLVE 270
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
RA E EM+++ I PN+VT+ +L+ G C +E + + L + +++ G PD TF+ +I
Sbjct: 271 RAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLI 330
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
LC+ + ++A MV+ V P+T TYNILI C G V ++F M R
Sbjct: 331 GALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQ 390
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
D +++ L++++C+ +++ A + M+ G++P +YS + +A++
Sbjct: 391 HDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYS----------KVGDARKL 440
Query: 453 FLSMEQNGCNPDSYT---SNLILETLVQQGRFEEAHDI 487
F ++ DS + N+ L+ L + G EA D+
Sbjct: 441 FGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDV 478
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 136/298 (45%), Gaps = 9/298 (3%)
Query: 205 CGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
CG +++ G+ F + +L+ L R EG + + N ++ ++
Sbjct: 130 CGRMNSI---GLLKNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKG 186
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE------ 318
C + A + + M D P+ +T LISG C+ +L ++
Sbjct: 187 LCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFG 246
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
KP +++ +ID LC+ E A + EM E G+ PN +TY L+ LC+ +
Sbjct: 247 INCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEE 306
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+ RLF +M + PD+ TF+ LI + C++ K+++A F M+ + P +Y+ LI+
Sbjct: 307 AKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIE 366
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+G DE K+ FLSM C D+ + +++++ + A + + +RGI
Sbjct: 367 GYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGI 424
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 124/263 (47%), Gaps = 6/263 (2%)
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E + N + + ++ +N + K +C M + N ++ N L+
Sbjct: 90 EALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNILL 149
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
+ C V + + M+L G++P+ TF +++ LC + +A+ M +
Sbjct: 150 NCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCR 209
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKM---QAD---RISPDIYTFNALIQSFCRMNKI 411
P+ IT +LI LC G+ +L+L + M +D P + +++ +I S C+ +
Sbjct: 210 PSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLV 269
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
E+A++ F M G+ P+ +Y++L+ L + ++EAK+ F+ M +G PD T +++
Sbjct: 270 ERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVL 329
Query: 472 LETLVQQGRFEEAHDIVKTSKER 494
+ L + G+ +EA + +R
Sbjct: 330 IGALCKVGKVKEASGLFDLMVQR 352
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 93/229 (40%), Gaps = 6/229 (2%)
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
I+C + A +M P L FN L K + + + G
Sbjct: 79 INCKSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGL 138
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
+ + N +++CLC R + ++ G PNT T+ L++ LC G + ++R
Sbjct: 139 LKNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVR 198
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT------LGLRPDNFSYSA 435
+F+ M P T LI CR A K +M+ + +P SYS
Sbjct: 199 VFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSC 258
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+I +L K G + AK+ F+ M++ G P+ T +L L +EEA
Sbjct: 259 IIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEA 307
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 7/207 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ Y+ V DA I +FQ M +D YN+ + G+C+ G V EA
Sbjct: 423 GIQPTVITYSKVGDARKLFGEI-----QFQDMVLDSISYS--IYNVYLDGLCKNGCVSEA 475
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + +E +A NV + LI+G C ++++ + + + + P+ T +++G
Sbjct: 476 LDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYG 535
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + P KA++L + E+ + NTL+ L NS + +L KM R P+
Sbjct: 536 LCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPD 595
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTF 211
+ST + L+ + +E +L TF
Sbjct: 596 ASTLLIVMDILLKDENYHECLNLLPTF 622
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 76/136 (55%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
++N++I+ + +S +++A+ F ++ + +PD TY I+I+G+C++G +A L +M
Sbjct: 493 IFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEM 552
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
E G APNV T+ L+ G C ++ +L M R + P+ +T+ ++ + + +
Sbjct: 553 EEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDASTLLIVMDILLKDENY 612
Query: 132 HKAFELLIRFMEREPL 147
H+ LL F +E +
Sbjct: 613 HECLNLLPTFPVQEAM 628
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 214/457 (46%), Gaps = 35/457 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ ++ A+ K D+ ++QM + + T NIL++ CR + AL
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LG+ P++ T+ L++GFC RV + + + M PN +++ G+ +
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
A +LL R ME++ G P+ T
Sbjct: 199 SKQVDNALDLLNR-MEKD----------------------------------GIGPDVVT 223
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ ++ L + ++ ++ KR + P T+ L++A K GR E + + +
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ L ++ +Y+++I C + +D A E+ M + P++VT++ LI+G+CK +V
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+L + + G + T+ +I CRA + A + MV GV PN ITYN+L+
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLL 403
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G + ++L + MQ + + DI T+N +I+ C+ ++ A + S+ GL
Sbjct: 404 HGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLM 463
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
PD ++Y+ ++ L K G EA F M+++G P+
Sbjct: 464 PDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 205/459 (44%), Gaps = 37/459 (8%)
Query: 40 QCKP--DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVA 97
QC+P ++ L+ I ++ D + L +QM+ LG N+ T IL++ FC +++
Sbjct: 74 QCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLS 133
Query: 98 EVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL 157
L M + P+ T SL++G R
Sbjct: 134 LALSFLGKMIKLGHEPSIVTFGSLLNGFCR------------------------------ 163
Query: 158 YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK 217
+A + +M GY P ++ + L ++ +L+ K G+
Sbjct: 164 -----GDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
P TY L+ L +GR + R ++ + K + +V ++N +ID K + A E
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
EM R + P++VT++ LI G C + + + E+ ++ G PD T++ +I+ C+
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
+ + E + EM + GV NT+TY ILI+ C G + + +F++M + P+I T
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+N L+ C KIEKA M G+ D +Y+ +I+ + K+G +A + S+
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G PD +T ++ L ++G EA + + KE GI
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGI 497
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 171/391 (43%), Gaps = 35/391 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG PS + ++++ + + + A F QM KP+ YN +I G+C+ VD
Sbjct: 145 LGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDN 204
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L+ +ME G P+V TY LI G C++ R ++ R++ M +R + P+ T +L+
Sbjct: 205 ALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALID 264
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ SEA +M R P
Sbjct: 265 ACVK-----------------------------------EGRVSEAEEFYEEMIRRSLDP 289
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ + L L+E + + +G P TY +L+ K+ + G +
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +V N +Y ++I +C+ ++ A EI R M + PN++T+N L+ G C +
Sbjct: 350 CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ K +L + + G D T+N +I +C+A DA D + G+ P+ TY
Sbjct: 410 GKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPD 394
++ L G + LF+KM+ D I P+
Sbjct: 470 TTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%)
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+L +++C P F+ ++ + + +++ + +M G+P N T NIL+
Sbjct: 67 DLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C ++ +L KM P I TF +L+ FCR +++ A F M+ +G +P+
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
Y+ +I L KS + D A ME++G PD T N ++ L GR+ +A +V
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246
Query: 491 SKERGI 496
+R I
Sbjct: 247 MTKREI 252
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G+ P+ YN ++ L + I+ A + M + D TYNI+I G+C+ G V
Sbjct: 389 FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVA 448
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
+A + + G P+++TYT ++ G E + MKE + PNE V
Sbjct: 449 DAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNECYV 504
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/520 (25%), Positives = 228/520 (43%), Gaps = 48/520 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P + N V+ L + D + M +P FTYN L+ C+ G +D+A
Sbjct: 189 GVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQA 248
Query: 65 LRLVKQMEG--LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+ L+K ME G PN TY ++I+G + + ++++IM+ + T L+
Sbjct: 249 VALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKA-SAFTYNPLI 307
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
G+ KA LL+ ME E + +V NTL+ L A A +M +G
Sbjct: 308 TGLLARDFVEKAGALLLE-MENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGL 366
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
LP+ T++ + +L + + + G+ P TY +L++ + G D+EG R
Sbjct: 367 LPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLG-DLEGAR 425
Query: 242 YLNH-------------------------------VFKDRLVS-----NVNSYNMVIDCF 265
L +F D ++S + +YN I
Sbjct: 426 RLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAE 485
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
+ + A ++ EM R I+ + VT+N LI G CK + L + ++ G + D
Sbjct: 486 LTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDC 545
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T+ +I C R +A + MV G+ P+ +TY I I + C G++ + F+K
Sbjct: 546 VTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRK 605
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M + + P+ T+N L+ + CRM + E A + F ML GL P+ ++Y+ LI K G
Sbjct: 606 MLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGN 665
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ A + + M Q G +PD T N + + F E H
Sbjct: 666 WVHAIRLYCEMHQKGIHPDHCTHNALFKG------FGEGH 699
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/485 (23%), Positives = 200/485 (41%), Gaps = 40/485 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSID--LAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
LG+ PS YN ++D+ K+ +D +A LK + C P+ TYN++I+G+ R G +
Sbjct: 223 LGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGEL 282
Query: 62 DEALRLVK----------------------------------QMEGLGYAPNVYTYTILI 87
++A +LV +ME G P V TY LI
Sbjct: 283 EKAAQLVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLI 342
Query: 88 DGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPL 147
DG + M+ + + P+ T SL++G + + +A L
Sbjct: 343 DGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLG 402
Query: 148 TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV--TCLVTGLDLNETC 205
L N L+ A + +M + LP+ T+ + +C+V L +
Sbjct: 403 PTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRI- 461
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
D + +G++P Y + A G + + + S+ +YN++ID
Sbjct: 462 -FFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGL 520
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
CK + A + +M + + VT+ LI HC+ + + + + ++ G P
Sbjct: 521 CKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSV 580
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T+ I CR A +M+E GV PN +TYN+L+ +LC +G + + F +
Sbjct: 581 VTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHE 640
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M + P+ YT+ LI C+ A + + M G+ PD+ +++AL K +
Sbjct: 641 MLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEGHM 700
Query: 446 FDEAK 450
+D +
Sbjct: 701 YDAVQ 705
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 164/380 (43%), Gaps = 38/380 (10%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDR--GYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
NTLL +A A+L+ M R G LP T++ + L +L + ++D
Sbjct: 233 NTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVD-I 291
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
++ K TY L+ L + L + + +V V +YN +ID K
Sbjct: 292 MRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNA 351
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
+ A EMR + + P+L+T+N+LI+G+CK + + L L G P T+N +
Sbjct: 352 EAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNIL 411
Query: 332 IDCLCR------AHRFEDAL---DCLS--------------------------EMVEWGV 356
ID CR A R ++ + DCL EM+ G+
Sbjct: 412 IDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGL 471
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
P+ YN I + IG + + +L ++M IS D T+N LI C+ ++ A
Sbjct: 472 EPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYV 531
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
+ M+T GLR D +Y+ LI A + GR EAK F M +G +P T + + T
Sbjct: 532 LWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYC 591
Query: 477 QQGRFEEAHDIVKTSKERGI 496
++G A+ + E G+
Sbjct: 592 RRGNLYLAYGWFRKMLEEGV 611
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
L FQ+M ++P + N +++ + + + ML LG+ P F+Y+ L+ +
Sbjct: 179 LSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDS 238
Query: 440 LIKSGRFDEAKQTFLSMEQN--GCNPDSYTSNLILETLVQQGRFEEAH---DIVKTSKE 493
K+GR D+A ME GC P+ T N+++ L ++G E+A DI++ SK+
Sbjct: 239 FCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKK 297
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%)
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
AF M G+ P + +++ L + R+D+ + + M Q G P +T N +L++
Sbjct: 181 AFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFC 240
Query: 477 QQGRFEEAHDIVKTSKERG 495
+ GR ++A ++K + R
Sbjct: 241 KAGRMDQAVALLKDMEARA 259
>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 687
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/488 (27%), Positives = 210/488 (43%), Gaps = 4/488 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S T YN I A A ++M + PD TYN I + G EA
Sbjct: 105 GGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEA 164
Query: 65 LRLVKQMEGL--GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+ L+ QM G P+V TY I N R E +LE M + V PN T S +
Sbjct: 165 MDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAI 224
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ +A +LL +E+ N ++ + EA +L +M
Sbjct: 225 GACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIP 284
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+ ++ + G E +L+ +GV P +Y ++A K R E
Sbjct: 285 ADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDL 344
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVN-MMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + LV V SYN C VN A E+ +EM + IAPN +++N+ +
Sbjct: 345 LREMTTVGLVPTVISYNSAT-AACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACA 403
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + K +LL + G PD +FNS ID R ++E A++ L EM G+ PN I
Sbjct: 404 KGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVI 463
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN I + ++ LF++M +SP++ T+N++I + + + E A + M
Sbjct: 464 TYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGM 523
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G+ PD SY++ I+A K +++ A Q M G PD + N + + GR+
Sbjct: 524 PARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRW 583
Query: 482 EEAHDIVK 489
EA ++K
Sbjct: 584 REALGLLK 591
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 229/500 (45%), Gaps = 14/500 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P YN+ I A A +QM P+ TYN I + +EA
Sbjct: 177 GITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEA 236
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L++++ G+ P+ TY +ID R E +L M ++ + + S++
Sbjct: 237 MDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAA 296
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS-----EAAAILRKMGDR 179
R +A +LL + TQ + N + Y + ++ A EA +LR+M
Sbjct: 297 CGRGRRWKEAMDLLEQMR-----TQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTV 351
Query: 180 GYLPESSTFD-YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G +P +++ T C V G + E +L +G+ P +Y ++A K G+ +
Sbjct: 352 GLVPTVISYNSATAACAVNGRWV-EALELLKEMPAQGIAPNTISYNSALDACAKGGQWEK 410
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ L + ++ S+N ID + + A E+ REM + PN++T+N+ I
Sbjct: 411 AVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIE 470
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
+ A + L + G P+ T+NSMID + ++E A+ L+ M GV P
Sbjct: 471 ACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAP 530
Query: 359 NTITYNILIRSLCAIGDVAR-SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
+ I+YN I + C G+ +L+L + M PDI ++N+ + + + + +A
Sbjct: 531 DVISYNSAIEA-CGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGL 589
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
M T+GL P+ SY A I A K ++D A + M+ +G P+ T + ++ +
Sbjct: 590 LKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAK 649
Query: 478 QGRFEEAHDIVKTSKERGIS 497
QGR++EA D++ + +G++
Sbjct: 650 QGRWKEAVDLLTDLRRQGLT 669
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 199/425 (46%), Gaps = 2/425 (0%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
G + + +Y I I N ++ A R+L M V P+ T S + + +A
Sbjct: 105 GGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEA 164
Query: 135 FELLIRFME-REPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+LL + + E +T +V N+ + SN EA +L +M +G P T++ +
Sbjct: 165 MDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAI 224
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
G E +L+ I++G P TY +++A K GR +E L + + +
Sbjct: 225 GACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIP 284
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
++V SY+ VI + A ++ +MR + ++PN++++N+ I K + +L
Sbjct: 285 ADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDL 344
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L + G P ++NS R+ +AL+ L EM G+ PNTI+YN + +
Sbjct: 345 LREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAK 404
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G ++++L + M PDI +FN+ I + R + E A + M T GL P+ +
Sbjct: 405 GGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVIT 464
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y++ I+A +S R+ EA F M G +P+ T N +++ + ++E A ++
Sbjct: 465 YNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMP 524
Query: 493 ERGIS 497
RG++
Sbjct: 525 ARGVA 529
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 201/473 (42%), Gaps = 55/473 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PSTR YN VIDA K A QM + D +Y+ +I R EA
Sbjct: 247 GFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEA 306
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCP-----NEATVR 119
+ L++QM G +PNV +Y ID R E +L M + P N AT
Sbjct: 307 MDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAA 366
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA-----SEAAAILR 174
V+G + +A ELL +E Q + NT+ Y + ++ A +A +LR
Sbjct: 367 CAVNGRW-----VEALELL-----KEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLR 416
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
M G P+ +F+ + + CG RG + + T + L+ + AG
Sbjct: 417 GMSTVGSDPDIISFNSAI----------DACG-------RGQQ--WETAVELLREMPTAG 457
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
L NV +YN I+ + A + REM R ++PN+VT+N
Sbjct: 458 ----------------LTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYN 501
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
++I K + +LL + G PD ++NS I+ + ++E AL L M
Sbjct: 502 SMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTR 561
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G P+ I+YN + + G +L L + M ++P+ ++ A I + + + + A
Sbjct: 562 GPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVA 621
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ M T G P+ +YSA I A K GR+ EA + + G PD+ T
Sbjct: 622 VRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQT 674
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 144/326 (44%), Gaps = 2/326 (0%)
Query: 174 RKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
R RG P+S ++ G D LD F G ++Y + + A
Sbjct: 64 RGAASRGGKPKSLVKLKSILLEAKGRDWRTALAALDEFKISGGSLDTTSYNIAIAACSNG 123
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM--RDRDIAPNLV 291
+ R L + + + +V +YN I K A ++ +M I P++V
Sbjct: 124 RQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVV 183
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
T+N+ I+ + +LL ++ G P+ T+NS I + R+E+A+D L E+
Sbjct: 184 TYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEV 243
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
+E G PP+T TYN +I + G ++ L +M + I D+ +++++I + R +
Sbjct: 244 IEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRW 303
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
++A M T G+ P+ SY++ I A K R+ EA M G P + N
Sbjct: 304 KEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSA 363
Query: 472 LETLVQQGRFEEAHDIVKTSKERGIS 497
GR+ EA +++K +GI+
Sbjct: 364 TAACAVNGRWVEALELLKEMPAQGIA 389
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 150/366 (40%), Gaps = 2/366 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP+ YN+ IDA K + A ++M+ P +YN G EA
Sbjct: 317 GVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEA 376
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+K+M G APN +Y +D + + ++L M P+ + S +
Sbjct: 377 LELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDA 436
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
R A ELL R M LT ++ N+ + ++ EA + R+M RG P
Sbjct: 437 CGRGQQWETAVELL-REMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSP 495
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + G +L RGV P +Y +EA K + + L
Sbjct: 496 NVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLL 555
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ ++ SYN + K A + ++M + PN V++ I K
Sbjct: 556 KGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKG 615
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ +L + G P+ T+++ ID + R+++A+D L+++ G+ P+ TY
Sbjct: 616 EQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTY 675
Query: 364 NILIRS 369
+I +
Sbjct: 676 LTVISA 681
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 126/333 (37%), Gaps = 35/333 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P+T YN+ +DA K + A + MS PD ++N I R + A
Sbjct: 387 GIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETA 446
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+++M G PNV TY I+ + R E + M R + PN T S++
Sbjct: 447 VELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDA 506
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +EL ++ +L M RG P+
Sbjct: 507 CAK----GEQWELAVQ-------------------------------LLTGMPARGVAPD 531
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+++ + G +L RG KP +Y + A K+GR E L
Sbjct: 532 VISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLK 591
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L N SY I K D A I +EM+ PNL+T++ I K
Sbjct: 592 DMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQG 651
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
+ +LL L G PD T+ ++I R
Sbjct: 652 RWKEAVDLLTDLRRQGLTPDAQTYLTVISAFQR 684
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 104/265 (39%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S +G P +N+ IDA + + A ++M P+ TYN I R
Sbjct: 418 MSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSAR 477
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
EA+ L ++M G +PNV TY +ID ++ ++L M R V P+ + S
Sbjct: 478 WQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNS 537
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + A +LL R P + N+ + + + EA +L+ M G
Sbjct: 538 AIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVG 597
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P + ++ + G + IL G P TY ++A K GR E
Sbjct: 598 LTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAV 657
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCF 265
L + + L + +Y VI F
Sbjct: 658 DLLTDLRRQGLTPDAQTYLTVISAF 682
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 216/493 (43%), Gaps = 6/493 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P +YN++I A ++ A + M P R TYN +I+ G +AL L
Sbjct: 44 PDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALEL 103
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
K+M G P++ T+ I++ N + ++ EIMK NV + T+ ++H + +
Sbjct: 104 CKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVK 163
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCN--TLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+A EL ER V ++++ AI M G P
Sbjct: 164 IGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNI 223
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
++ + + E I + K G++P +Y L+ A ++ + + N
Sbjct: 224 VAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNK 283
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS--GHCKD 303
+ K+ N SYN +ID + M+ A + EM I P++V+ +TL++ G C+
Sbjct: 284 MKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCR- 342
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + +L G + +NS I +E AL+ + M E V P+ +TY
Sbjct: 343 -QITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTY 401
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NILI +G SLR F+ M ++S +++LI S+ + K+ +AE F SM
Sbjct: 402 NILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKK 461
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G PD +Y+ LI+A G + A F ME NG PD+ + ++E + G E
Sbjct: 462 SGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPER 521
Query: 484 AHDIVKTSKERGI 496
+++ K++ I
Sbjct: 522 VLQLMEFMKKKSI 534
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 179/412 (43%), Gaps = 4/412 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P +N V+ AL A F+ M D FT NI+IH + +IG EA
Sbjct: 111 GVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEA 170
Query: 65 LRLVKQMEG--LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+ L M P+V TYT ++ +C +V + ++M V PN SL+
Sbjct: 171 IELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLL 230
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGY 181
G + H+ + +++ L +V T LL ++ +A + KM
Sbjct: 231 -GAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSC 289
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P +++ + + L E G+L K G++P + L+ A + + +
Sbjct: 290 KPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIET 349
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + N +YN I + ++A E+ MR+ ++ P+ VT+N LISG
Sbjct: 350 ILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSS 409
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + ++ +++ K ++S+I + + +A S M + G P+ +
Sbjct: 410 KLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVL 469
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
TY LI++ A G R+ LF++M+ + I PD ++L+++F + + E+
Sbjct: 470 TYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPER 521
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 45/325 (13%)
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNV----NSYNMVIDCFCKVNMMD 272
KP Y L+ A +AG+ R+ ++ +D L + + +YN VI+
Sbjct: 43 KPDADIYNSLIHAHSRAGQW----RWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWK 98
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
+A E+C++M + + P+LVT N ++S A+ K ++ D FT N +I
Sbjct: 99 KALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIII 158
Query: 333 DCLCRAHRFEDALDCLSEM-------------------------------------VEWG 355
CL + + +A++ + M V G
Sbjct: 159 HCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEG 218
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
V PN + YN L+ + + G +L +F ++ + + PDI ++ +L+ ++ R + EKA
Sbjct: 219 VKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAR 278
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ F M +P+ SY+ALI A +G EA ME++G PD + + +L
Sbjct: 279 EVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAAC 338
Query: 476 VQQGRFEEAHDIVKTSKERGISFKS 500
+ + I++ ++ RGI +
Sbjct: 339 GRCRQITRIETILEAARSRGIDLNT 363
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 125/275 (45%), Gaps = 41/275 (14%)
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
Y M+I + + N +D+A + EM++ P+ +N+LI H + + ++ +L
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY-------------- 363
P + T+N++I+ A ++ AL+ +M E GV P+ +T+
Sbjct: 74 RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133
Query: 364 ---------------------NILIRSLCAIGDVARSLRLFQKMQADRIS--PDIYTFNA 400
NI+I L IG ++ LF M+ R PD+ T+ +
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTS 193
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
++ S+C ++E + F M+ G++P+ +Y++L+ A G EA F +++NG
Sbjct: 194 IMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNG 253
Query: 461 CNPD--SYTSNLILETLVQQGRFEEAHDIVKTSKE 493
PD SYTS +L + + E+A ++ K+
Sbjct: 254 LRPDIVSYTS--LLNAYGRSAQPEKAREVFNKMKK 286
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 172/415 (41%), Gaps = 10/415 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++++A +S + A F +M + CKP++ +YN LI G++ EA
Sbjct: 253 GLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEA 312
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +ME G P+V + + L+ +++ + +LE + R + N S +
Sbjct: 313 VGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKS 372
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
D KA EL E + N L+ S +E+ M D
Sbjct: 373 YLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSST 432
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + L+E + K G P TY L++A Y AG G +
Sbjct: 433 KEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQA-YNAG---GGWKRAW 488
Query: 245 HVFKDRLVSNVNSYNMV----IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+FK+ V+ + ++ ++ F K +R ++ M+ + I N ++ +I+
Sbjct: 489 DLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIAS- 547
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKF-TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
C KT ++ L+ T N +++ L + + E+ + +MV
Sbjct: 548 CTMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLFYKMVTSCSTVG 607
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
TY +++R+L +G + + + Q M+ + P +Y F ++ R N ++ A
Sbjct: 608 LSTYAVVLRNLLVVGKWRKYIEVLQWMEDSGVHPTLYMFQNVLPYIWRENGMDFA 662
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%)
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y ++IR V ++ LF +MQ R PD +N+LI + R + A ML
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ P +Y+ +I A +G + +A + M +NG PD T N++L L ++
Sbjct: 74 RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133
Query: 483 EAHDIVKTSKERGISFKSF 501
+A + K ++ +F
Sbjct: 134 KAISYFEIMKGANVTSDTF 152
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 217/472 (45%), Gaps = 10/472 (2%)
Query: 17 IDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGY 76
+ ALV +D A L+ + S PD N L+ +CR G D+A R+V G
Sbjct: 78 LSALVHRGDLD-AALRLVESSPR--PPDAALANRLVRDLCRRGRPDDAERVVG---ACGP 131
Query: 77 APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFE 136
A V Y L DG+C A R+ + RV+ M V PN T L+H + A
Sbjct: 132 AATVVAYGALTDGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALS 188
Query: 137 LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLV 196
+L + R + N LL +A ++ M G P + T++ + +
Sbjct: 189 VLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMC 248
Query: 197 TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVN 256
D+++ +L G KP Y +++ L A R + D + + ++ N
Sbjct: 249 GEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEA 308
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
++N+VI C+ ++ +A ++ +M N+VT+N +I+G C+ V LL +
Sbjct: 309 TFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM 368
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
G KPD T+N+++ LC A ++ DA + + M + G P+ +T+N LI LC G +
Sbjct: 369 KSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLM 428
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
++ +F++M +P+ T++ +I + K+++A + F M G PD Y L
Sbjct: 429 VDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLL 487
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+ L +EA QT ++ +G +P + N IL L + G+ E A DI+
Sbjct: 488 AECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIM 539
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 117/488 (23%), Positives = 219/488 (44%), Gaps = 39/488 (7%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ G + + Y A+ D ++ + A M V +P+ +TYN LIH +C G
Sbjct: 126 VGACGPAATVVAYGALTDGYCRAGRLGDARRVVGGMPV---QPNAYTYNPLIHTLCERGQ 182
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V +AL ++ M G AP+V TY IL++ C + + ++++M+ PN T
Sbjct: 183 VRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNV 242
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G+ D A ELL R + G
Sbjct: 243 LMDGMCGEGDVDDALELL-----------------------------------RNLPSHG 267
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P + ++ + L + + ++ ++ P +T+ +++ +L + G +
Sbjct: 268 CKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAI 327
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L + K +N+ +YN +I+ C+ +D A + +M+ P++VT+NTL+ G
Sbjct: 328 QLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGL 387
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C A+ EL+ + + G PD TFN++I LC+ DA++ +M + G PN+
Sbjct: 388 CSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNS 447
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITY+ +I L + ++L LF +M +PD + L + + IE+A +
Sbjct: 448 ITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRK 506
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+ G+ P Y+A++ L ++G+ + A M +GC PD T +++E L +G
Sbjct: 507 LQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGY 566
Query: 481 FEEAHDIV 488
EA +++
Sbjct: 567 LNEARELL 574
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 197/443 (44%), Gaps = 10/443 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ + + P+ YN +I L + + A M C PD TYNIL+ C+
Sbjct: 158 VGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRG 217
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+A+ L+ M G PN TY +L+DG C V + +L + P+ +
Sbjct: 218 YRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNT 277
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ A EL+ + + N ++Y L + +A +L KM G
Sbjct: 278 VLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHG 337
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
T++ + L +++ G+L G KP TY L++ L A + V+ +
Sbjct: 338 CTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAE 397
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
++++ ++ + + ++N +I C+ +M A E+ ++M D+ PN +T++T+ISG
Sbjct: 398 ELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGL 457
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K ++ + EL + GF PDK + + +CL E+A+ + ++ + G+ P+T
Sbjct: 458 AKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHT 516
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ YN ++ LC G ++ + M + PD T+ LI+ + +A +
Sbjct: 517 VLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIK 576
Query: 421 MLTLGLRPDNFSYSALIKALIKS 443
+ S L+ +LIKS
Sbjct: 577 LC---------SRDVLVNSLIKS 590
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 152/286 (53%)
Query: 216 VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT 275
V+P TY L+ L + G+ + L+ + +V +YN++++ CK +A
Sbjct: 163 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 222
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
E+ MR PN VT+N L+ G C + +V ELL L G KP +N+++ L
Sbjct: 223 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 282
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
C A R+ DA + ++EM+ PPN T+N++I SLC G + ++++L +KM + +I
Sbjct: 283 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 342
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
T+NA+I C ++ A M + G +PD +Y+ L+K L + ++ +A++ +
Sbjct: 343 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDN 402
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
M QNGC PD+ T N ++ L Q+G +A ++ K ++G + S
Sbjct: 403 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSI 448
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 152/322 (47%)
Query: 174 RKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
R +G P + T++ + L + + +LD + RG P TY +L+EA K
Sbjct: 156 RVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKG 215
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
+ ++ + + N +YN+++D C +D A E+ R + P+ V +
Sbjct: 216 RGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNY 275
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
NT++ G C EL+ +L P++ TFN +I LCR + A+ L +M +
Sbjct: 276 NTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSK 335
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
G N +TYN +I LC +V ++ L KM++ PDI T+N L++ C +
Sbjct: 336 HGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVD 395
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
AE+ +M G PDN +++ LI L + G +A + F M GC P+S T + I+
Sbjct: 396 AEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIIS 455
Query: 474 TLVQQGRFEEAHDIVKTSKERG 495
L + + ++A ++ +G
Sbjct: 456 GLAKATKLDQALELFNEMGHKG 477
>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Cucumis sativus]
Length = 1079
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/512 (23%), Positives = 223/512 (43%), Gaps = 35/512 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS N ++ ++VK+ L + F+QM + P+ ++NILI +C G + +A
Sbjct: 135 GFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKA 194
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ ME GY P + +Y L+ C R ++ M+ + + + T +
Sbjct: 195 VNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDS 254
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R + + +L + + ++ NTL+ A + +M + P
Sbjct: 255 LCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPN 314
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + E +LD V+P T L+ LYK+ + L
Sbjct: 315 LITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILE 374
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+R N S+ ++ID C+ ++D A ++ EM + P+++TF+ LI+G CK
Sbjct: 375 RYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVG 434
Query: 305 EVHKTRELLVMLLECGFKP-----------------------------------DKFTFN 329
++K +E++ + GF P D FT N
Sbjct: 435 NINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCN 494
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
S++ LC + +A + L + G+ PN++T++ +I +GD + + +F +M +
Sbjct: 495 SLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISC 554
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
P +T+ +L++ C+ +A K + + L D SY+ LI + KSG EA
Sbjct: 555 GHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEA 614
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ F M QN PDSYT IL L+++GR
Sbjct: 615 VRLFEEMIQNNILPDSYTYTCILSGLIREGRL 646
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 205/456 (44%), Gaps = 35/456 (7%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
C + +++LI R G+V A+ M G+ P+VYT +++ R V+
Sbjct: 101 CSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVW 160
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
+ M VCPN ++ F +LI + + +K
Sbjct: 161 SFFKQMLTSRVCPNVSS-----------------FNILISVLCVQGKLKK---------- 193
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
A IL M GY+P +++ ++ ++ +G++
Sbjct: 194 --------AVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADV 245
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY + +++L + R +G L + + N SYN +I+ F K + AT + E
Sbjct: 246 CTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNE 305
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M + +++PNL+T+N LI+G+C + + +L ++ +P++ T ++++ L ++ +
Sbjct: 306 MIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAK 365
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
F+ A + L N I++ ++I LC G + + +L +M D + PDI TF+
Sbjct: 366 FDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSV 425
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI FC++ I KA++ + G P+N +S LI K G EA + + +M NG
Sbjct: 426 LINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNG 485
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
N D++T N ++ +L + G+ EA + + G+
Sbjct: 486 QNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGL 521
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/525 (22%), Positives = 231/525 (44%), Gaps = 48/525 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ +++ +I K ++ A + M+++ D FT N L+ +C G + EA
Sbjct: 450 GFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEA 509
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + +G PN T+ +I+G+ N + F V + M P+ T SL+
Sbjct: 510 EEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKV 569
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + +A +LL + + NTL+ +S + EA + +M LP+
Sbjct: 570 LCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPD 629
Query: 185 SSTFDYTVTCLVTGL--DLNETCGILDTFIKRGVKPRFST-----YLLLMEALYKAGRDV 237
S YT TC+++GL + C + F+ R ++ T Y ++ L+KAG+
Sbjct: 630 S----YTYTCILSGLIREGRLVCAFI--FLGRLMQKEILTLNSIVYTCFIDGLFKAGQSK 683
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ + L ++ + N + D + ++ + A+ + + R++++ PNL TFN L+
Sbjct: 684 AALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILL 743
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G+ + ++ +L ++ GF P++ T++S+I LC E + L +
Sbjct: 744 HGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESST 803
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA----------------- 400
+ +T+N+LIR C I D+ + + L M+ R+S D T A
Sbjct: 804 IDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVF 863
Query: 401 ------------------LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
+++ CR+ I+ A K M+ LG+ D+ + A+++ L
Sbjct: 864 MHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLAL 923
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
G+ +EA M + P + T ++ ++ F+EAH++
Sbjct: 924 CGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNL 968
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/487 (22%), Positives = 204/487 (41%), Gaps = 9/487 (1%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ +++ L KS D+A ++ +++ + ++ ++I G+CR G++DEA
Sbjct: 346 VRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAF 405
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+L+ +M G P++ T+++LI+GFC + + V+ + PN +L++
Sbjct: 406 QLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNS 465
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ + ++A + CN+L+ L N EA L + G +P S
Sbjct: 466 CKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNS 525
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
TFD + D + + D I G P TY L++ L K E + L
Sbjct: 526 VTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKK 585
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ L + SYN +I K + A + EM +I P+ T+ ++SG ++
Sbjct: 586 LHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGR 645
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSM-----IDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ L L++ + T NS+ ID L +A + + AL EM E G+ +
Sbjct: 646 LVCAFIFLGRLMQ----KEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDL 701
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
I N + +G V + L K + + P++ TFN L+ + R I K +
Sbjct: 702 IALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNL 761
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G P+ +Y +LI L G + + D T N+++ +
Sbjct: 762 MRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEIND 821
Query: 481 FEEAHDI 487
++ D+
Sbjct: 822 LDKVIDL 828
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/494 (20%), Positives = 207/494 (41%), Gaps = 3/494 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS Y +++ L K + A +++ D +YN LI I + G + EA
Sbjct: 555 GHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEA 614
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL-EIMKERNVCPNEATVRSLVH 123
+RL ++M P+ YTYT ++ G R+ F L +M++ + N +
Sbjct: 615 VRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFID 674
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+F+ KA L + ME + L+ L+ N++ S A++++ K ++ +
Sbjct: 675 GLFKA-GQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVI 733
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P +TF+ + G D+ + + + G P TY L+ L G G +
Sbjct: 734 PNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKM 793
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + + ++NM+I C++N +D+ ++ M ++ + T + +
Sbjct: 794 LKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVR 853
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ +L+ GF P + +M+ +CR + A +MV G+ +
Sbjct: 854 RMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAA 913
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
++R L G + ++ + Q+M + P TF L+ FC+ + ++A M
Sbjct: 914 ECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILME 973
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
++ D +Y+ LI A +G A + ++Q G P+ T +++ + +
Sbjct: 974 HYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVS 1033
Query: 483 EAHDIVKTSKERGI 496
++K +RG+
Sbjct: 1034 RGEIVLKDLNDRGL 1047
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 107/498 (21%), Positives = 210/498 (42%), Gaps = 3/498 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS +G+ P++ ++ +I+ A+ F +M P FTY L+ +C+
Sbjct: 516 ISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQN 575
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
EA +L+K++ + A + +Y LI + + E R+ E M + N+ P+ T
Sbjct: 576 FWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTC 635
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
++ G+ R AF L R M++E LT +V + L + A + ++M ++
Sbjct: 636 ILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEK 695
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G + + + ++ + V P +T+ +L+ Y G+D+
Sbjct: 696 GLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHG-YSRGQDIMS 754
Query: 240 -DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ N + + N +Y+ +I C M++ ++ + + +TFN LI
Sbjct: 755 CFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIR 814
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
C+ ++ K +L + DK T ++ D L R ++ + EM++ G P
Sbjct: 815 KCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIP 874
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ Y +++ +C +GD+ + +L +M A IS D A+++ KIE+A
Sbjct: 875 TSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWIL 934
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
ML + P +++ L+ K F EA + ME D N+++
Sbjct: 935 QRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCAN 994
Query: 479 GRFEEAHDIVKTSKERGI 496
G A D + K++G+
Sbjct: 995 GDVITALDFYEEIKQKGL 1012
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 49/122 (40%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGIS A++ L I+ A Q+M + P T+ L+H C+ E
Sbjct: 905 LGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKE 964
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L ME ++ Y +LI C V E +K++ + PN T R LV
Sbjct: 965 AHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVS 1024
Query: 124 GV 125
+
Sbjct: 1025 AI 1026
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 227/489 (46%), Gaps = 24/489 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ I P+ +N +I ++ K +D A F++M V +C PD +TY L+ G+C++ +DE
Sbjct: 175 MNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDE 234
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+ +M+ G P+ T+ +LI+G C V ++++ M + PNE T +L+H
Sbjct: 235 AVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIH 294
Query: 124 GVFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
G+ CL KA LL R + + + ++ T++ L A + A +L M +RGY
Sbjct: 295 GL--CLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGY 352
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+ + V+ L E + + +G K Y L++ L + + E +
Sbjct: 353 IVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMK 412
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L+ + N +++ ++ F +V +A E+ ++M + A N V ++ LI G C
Sbjct: 413 ILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLC 472
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM--VEWGVPPN 359
KD +V + + +L G +PD ++SMI LC A E+AL +EM +E P+
Sbjct: 473 KDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPD 532
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
ITYNIL +LC ++R++ L M PD+ T N ++ + F
Sbjct: 533 VITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFL 592
Query: 420 SMLTLGL--RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
L + L R N S +++ ++ Q FLS P + T ++ L Q
Sbjct: 593 DELVVRLLKRQRNLGASKIVEVML---------QKFLS-------PKASTWARVVHELCQ 636
Query: 478 QGRFEEAHD 486
+ + D
Sbjct: 637 PKKIQAVID 645
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 218/477 (45%), Gaps = 42/477 (8%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD----QCKPDRFTYNILIHGICRIGVVDE 63
P+ + +N+V++ ++++ D A L+F V P+ ++N++I +C++G+VD
Sbjct: 141 PTVKSFNSVLNVIIQAGFHDRA-LEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDN 199
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L ++M P+ YTY L+DG C R+ E +L+ M+ P+ AT L++
Sbjct: 200 AIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLIN 259
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + D + KLV N L +G +P
Sbjct: 260 GLCKKGDFTR--------------VTKLVDNMFL---------------------KGCVP 284
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + L L++ +LD + P TY ++ L K GR ++G R L
Sbjct: 285 NEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVL 344
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + N Y++++ K + A + +E D+ N V ++ L+ G C+D
Sbjct: 345 VLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRD 404
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + ++L + + G P+ FTF+S++ A++ +M + N + Y
Sbjct: 405 RKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCY 464
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
++LI LC G V ++ ++ KM A PD+ ++++IQ C +E+A K + ML
Sbjct: 465 SVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLC 524
Query: 424 L--GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
L +PD +Y+ L AL K A SM GC+PD T N+ L L ++
Sbjct: 525 LEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREK 581
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/491 (22%), Positives = 214/491 (43%), Gaps = 47/491 (9%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVD-QCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
++ A A + + +I+L F +MS + CKP ++N +++ I + G D AL
Sbjct: 113 MFKAYGKAHLPNKAIEL----FYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNH 168
Query: 71 MEG---LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ G + PNV ++ ++I C V + M R P+ T +L+ G+ +
Sbjct: 169 VVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCK 228
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
++R EA ++L +M G P +T
Sbjct: 229 --------------VDR---------------------IDEAVSLLDEMQIEGCFPSPAT 253
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
F+ + L D ++D +G P TY L+ L G+ + L+ +
Sbjct: 254 FNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMV 313
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ V N +Y +I+ K + M +R N ++ L+SG K+ +
Sbjct: 314 SSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSE 373
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ L ++ G K + +++++D LCR + ++A+ LSEM + G PN T++ L+
Sbjct: 374 EAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLM 433
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+ +G+ +++ +++ M + + ++ LI C+ K+ +A + ML G R
Sbjct: 434 KGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCR 493
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTF---LSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
PD +YS++I+ L +G +EA + + L +E + PD T N++ L +Q A
Sbjct: 494 PDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDS-QPDVITYNILFNALCKQSSISRA 552
Query: 485 HDIVKTSKERG 495
D++ + +RG
Sbjct: 553 VDLLNSMLDRG 563
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 136/288 (47%), Gaps = 3/288 (1%)
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR---LVSNVNSYNMVIDCFCKVNMMDR 273
KP ++ ++ + +AG + NHV + ++ NV S+N++I CK+ ++D
Sbjct: 140 KPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDN 199
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A E+ REM R P+ T+ TL+ G CK + + LL + G P TFN +I+
Sbjct: 200 AIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLIN 259
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
LC+ F + M G PN +TYN LI LC G + ++L L +M + + P
Sbjct: 260 GLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVP 319
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
+ T+ +I + + + M G + + YS L+ L K G+ +EA + F
Sbjct: 320 NEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLF 379
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
GC ++ + +++ L + + +EA I+ ++G + +F
Sbjct: 380 KESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAF 427
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 204/472 (43%), Gaps = 7/472 (1%)
Query: 15 AVIDALVKSNSIDLAYLKFQQMSVDQ--CKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
A I A ++ + D A F + D P YN L+ + R +V + + M
Sbjct: 95 AAICAFARAGAADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMR 154
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G PNVYTY +LI C RV R+L+ M + P+E + +++ + +
Sbjct: 155 KAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLD 214
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A +L E P+ N +++ L E ++ +M RG P++ + V
Sbjct: 215 EARGILA---EMTPVGASY--NAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIV 269
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+L C IL + G P T+ +L++ + G+ + N + +
Sbjct: 270 GAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWA 329
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+ SYN++I C + + RA + M D P++ T++TLI G K ++ +
Sbjct: 330 PSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSI 389
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
+ G KP+ + +M+D LC+ F+ A + + +M PPNT+T+N LIRSLC
Sbjct: 390 WNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCD 449
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
+G R+L +F M+ P+ T+N L+ R E A + ML G S
Sbjct: 450 LGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVS 509
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
Y+ I L + EA M G PD++T N I+ ++G A
Sbjct: 510 YNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAA 561
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 206/471 (43%), Gaps = 5/471 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN +I AL +++ + A +M+ C+PD ++ +I +C++ +DEA
Sbjct: 157 GVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEA 216
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +M +G +Y ++ C R+ EVF V++ M R + P+ S+V
Sbjct: 217 RGILAEMTPVG-----ASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGA 271
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A +L R + + L+ ++ +A + M G+ P
Sbjct: 272 FCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPS 331
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ +++ + L DL + K P TY L++ KAG N
Sbjct: 332 TISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWN 391
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ NV Y ++D CK M D+A + +M + PN +TFNTLI C
Sbjct: 392 DMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLG 451
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + G P+ T+N ++ L R EDAL L+EM+ G + ++YN
Sbjct: 452 RAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYN 511
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I LC + + ++ L +M I PD +TFNA+I ++C+ + A M +
Sbjct: 512 TTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAV 571
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ +Y++L+ L + D+A L M G P+ T N+++ +
Sbjct: 572 NCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGI 622
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/480 (24%), Positives = 213/480 (44%), Gaps = 9/480 (1%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ R+YN ++DAL++ N + + M +P+ +TYN+LI +C+ V A R
Sbjct: 124 APTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARR 183
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++ +M G P+ ++T +I C R+ E +L M P A+ ++VH +
Sbjct: 184 MLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMT-----PVGASYNAVVHALC 238
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ F ++ + R + +++ A AIL +M G +P
Sbjct: 239 GQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQ 298
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
TF V +++ G+ + + G P +Y +L+ L G + +
Sbjct: 299 TFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCM 358
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K + +V +Y+ +ID F K +D A I +M + PN+V + ++ CK
Sbjct: 359 GKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMF 418
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ L+ + P+ TFN++I LC R AL+ M +G PPN TYN L
Sbjct: 419 DQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNEL 478
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ L G+ +LR+ +M + ++N I C+M I++A M+ G+
Sbjct: 479 LHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGI 538
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC--NPDSYTSNLILETLVQQGRFEEA 484
+PD F+++A+I A K G A M+ C N +YTS ++ L Q + ++A
Sbjct: 539 QPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTS--LMSGLCSQHKLDDA 596
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 150/344 (43%), Gaps = 5/344 (1%)
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
V N LL L ++ + + M G P T++ + L + +LD
Sbjct: 129 VYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEM 188
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
++G +P ++ ++ AL K R E L + SYN V+ C M
Sbjct: 189 ARKGCRPDEVSHTTIISALCKLDRLDEARGILAE-----MTPVGASYNAVVHALCGQFRM 243
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
+ EM R + P+ V + +++ CK E+ +L ++ G P+ TF +
Sbjct: 244 REVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVL 303
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
+ + DAL + MV G P+TI+YN+LIR LC IGD+ R+L +F M
Sbjct: 304 VKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDC 363
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
PD+ T++ LI F + ++ A + M G +P+ Y+ ++ L K FD+A+
Sbjct: 364 LPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAEN 423
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
M C P++ T N ++ +L GR A ++ + G
Sbjct: 424 LIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYG 467
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 63/131 (48%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN I L + I A + +M + +PD FT+N +IH C+ G V A ++ +M+
Sbjct: 510 YNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMD 569
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
+ N+ YT L+ G C+ ++ + L M +CPNEAT LV G+F L
Sbjct: 570 AVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGIFTHLGTI 629
Query: 133 KAFELLIRFME 143
L+ +E
Sbjct: 630 GPMHLIDHIIE 640
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 191/366 (52%)
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
E+L R +E+E + L+ S +A +L +MG RG P+ T++ V
Sbjct: 1 MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
+ L+E L++ G +P T+ +++ ++ GR ++ ++ L + + +
Sbjct: 61 MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
V ++N++I+ C+ ++ RA +I +M PN +++N L+ G CK+ ++ + + L
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
+++ G PD T+N+M+ LC+ + + A++ L+++ G P ITYN +I L +G
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
+++ L +M+ + PD+ T+++LI R K+E+A K F + G++P+ F+Y+
Sbjct: 241 KTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYN 300
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
+++ L K+ + D A M GC P + +++E + +G +EA +++ R
Sbjct: 301 SIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSR 360
Query: 495 GISFKS 500
G+ KS
Sbjct: 361 GVVKKS 366
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 170/352 (48%), Gaps = 10/352 (2%)
Query: 40 QCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV 99
+C PD TY ILI C V +A++L+ +M G P+V TY +L++G C R+ E
Sbjct: 11 ECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEA 70
Query: 100 FRVLEIMKERNVCPNEAT----VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-N 154
+ L M PN T +RS+ R +D K L+ M R+ + +V N
Sbjct: 71 IKFLNSMPSYGSQPNVITHNIILRSMCS-TGRWMDAEK----LLTEMVRKGCSPSVVTFN 125
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
L+ L + A IL KM G P S +++ + ++ L+ + R
Sbjct: 126 ILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSR 185
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G P TY ++ AL K G+ LN + + +YN VID KV D+A
Sbjct: 186 GCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQA 245
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
E+ EMR + + P+++T+++LI+G ++ +V + + + G KP+ FT+NS++
Sbjct: 246 VELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFG 305
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
LC+A + + A+D L+ M+ G P ++Y ILI + G +L L ++
Sbjct: 306 LCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 165/361 (45%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P Y +I+A + + A +M CKPD TYN+L++G+C+ G +DEA++
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ M G PNV T+ I++ C+ R + ++L M + P+ T L++ + R
Sbjct: 74 LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+A ++L + L N LL+ A L M RG P+ T
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ +T L ++ +L+ +G P TY +++ L K G+ + L+ +
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
L +V +Y+ +I + ++ A + ++ + PN T+N+++ G CK +
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ + L ++ G KP + ++ +I+ + ++AL+ L+E+ GV + +++
Sbjct: 314 RAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVV 373
Query: 368 R 368
R
Sbjct: 374 R 374
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 132/309 (42%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN +++ + K +D A M +P+ T+NI++ +C G +A
Sbjct: 46 GCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDA 105
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L+ +M G +P+V T+ ILI+ C + +LE M PN + L+HG
Sbjct: 106 EKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHG 165
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A + L + R + NT+L L + A +L ++ +G P
Sbjct: 166 FCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPV 225
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L ++ +L +G+KP TY L+ L + G+ E ++ +
Sbjct: 226 LITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFH 285
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
V + N +YN ++ CK DRA + M + P V++ LI G +
Sbjct: 286 DVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEG 345
Query: 305 EVHKTRELL 313
+ ELL
Sbjct: 346 LAKEALELL 354
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 90/188 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN ++ AL K +D A Q+S C P TYN +I G+ ++G D+A
Sbjct: 186 GCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQA 245
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M G G P+V TY+ LI G +V E + ++ V PN T S++ G
Sbjct: 246 VELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFG 305
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A + L + + ++ L+ ++N +A EA +L ++ RG + +
Sbjct: 306 LCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKK 365
Query: 185 SSTFDYTV 192
SS V
Sbjct: 366 SSAEQVVV 373
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 109/258 (42%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SPS +N +I+ L + + A ++M C P+ +YN L+HG C+ +D A
Sbjct: 116 GCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRA 175
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ ++ M G P++ TY ++ C +V +L + + P T +++ G
Sbjct: 176 IQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDG 235
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A ELL + + ++L+ LS EA + G P
Sbjct: 236 LSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPN 295
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + L + L I +G KP +Y +L+E + G E LN
Sbjct: 296 AFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLN 355
Query: 245 HVFKDRLVSNVNSYNMVI 262
+ +V ++ +V+
Sbjct: 356 ELCSRGVVKKSSAEQVVV 373
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 66/144 (45%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G SP YN VID L K D A +M KPD TY+ LI G+ R G
Sbjct: 217 LSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGK 276
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V+EA++ +EG G PN +TY ++ G C A++ L M + P E +
Sbjct: 277 VEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTI 336
Query: 121 LVHGVFRCLDPHKAFELLIRFMER 144
L+ G+ +A ELL R
Sbjct: 337 LIEGIANEGLAKEALELLNELCSR 360
>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 212/434 (48%), Gaps = 3/434 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L I P + N+++ AL++S ++LA+ ++M + ++ I G C G +D
Sbjct: 180 LNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDT 239
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+L+ +M+ LG P+V YTI+ID C + E +L M + V + +V S+V
Sbjct: 240 GWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVD 299
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + +A ++L F P V N+ + +L + +AA + + M + G +P
Sbjct: 300 GYCKVGKSEEAMDVLEVF-NLSP--NIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIP 356
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + D++ L +KRG++P +TY LL+++ K G +
Sbjct: 357 DCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLF 416
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + LV +V SYN +++ + K + +A E+ MR ++P+LVT+N LI G K
Sbjct: 417 QRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKR 476
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V++ +++L L GF PD TF ++I FE+A M E + P+ +T
Sbjct: 477 GLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTC 536
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+ L+ C +A + LF KM + D+ +N+LI FC + I+ A M+
Sbjct: 537 SALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIE 596
Query: 424 LGLRPDNFSYSALI 437
G+ P+N ++ AL+
Sbjct: 597 HGIMPNNITHHALV 610
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 167/333 (50%), Gaps = 3/333 (0%)
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
VCN+LL L + + A L++M +G +S ++ + +++ +L
Sbjct: 188 VCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEM 247
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
G+KP Y +++++L K E L + + + + S + V+D +CKV
Sbjct: 248 KYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKS 307
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
+ A ++ + +++PN+ FN+ IS C D + K ++ + E G PD F++ +M
Sbjct: 308 EEAMDV---LEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTM 364
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
+ C+ +AL L +M++ G+ P+ TY +LI S C G++ + LFQ+M + +
Sbjct: 365 MAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGL 424
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
PD+ ++N L+ + + ++KA + M + G+ PD +Y+ LI LIK G +EAK
Sbjct: 425 VPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKD 484
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ + G +PD T I+ +G FEEA
Sbjct: 485 ILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEA 517
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 175/400 (43%), Gaps = 22/400 (5%)
Query: 117 TVRSLVHGVFRCLDPHKAFELLIRFME---------------REPLTQKLVCNTLLYRLS 161
+V +++H + HKA +LL+ + E T++ V T+ L
Sbjct: 99 SVCTMIHILVSGNMNHKAMDLLLHLISYNSGEEGWHNIFLKIHETHTKRRVLETVYGMLV 158
Query: 162 N----NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK 217
N +M A ++ KM P + + L+ LN L +G+
Sbjct: 159 NCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLG 218
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
S L + G G + L + + +V +Y +VID CK++++ AT I
Sbjct: 219 LNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSI 278
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
+M + + V+ ++++ G+CK V K+ E + +L P+ F FNS I LC
Sbjct: 279 LFKMTQMGVFLDSVSVSSVVDGYCK---VGKSEEAMDVLEVFNLSPNIFVFNSFISKLCT 335
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
A +M E G+ P+ +Y ++ C + D++ +L+ KM I P + T
Sbjct: 336 DGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVAT 395
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+ LI S C+ +E AE F M+T GL PD SY+ L+ K G +A + M
Sbjct: 396 YTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMR 455
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G +PD T N+++ L+++G EA DI+ RG S
Sbjct: 456 SAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFS 495
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 189/451 (41%), Gaps = 5/451 (1%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
Y +L++ + + AL+L+ +M L P + L+ ++++ + L+ M
Sbjct: 153 VYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEM 212
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSM 165
K + + N + + + G + ++LL+ M+ + +V T++ L S+
Sbjct: 213 KSQGLGLNASIISLFISGYCSQGNIDTGWKLLME-MKYLGIKPDVVAYTIVIDSLCKMSL 271
Query: 166 ASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLL 225
EA +IL KM G +S + V E +L+ F + P +
Sbjct: 272 LKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVF---NLSPNIFVFNS 328
Query: 226 LMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
+ L G ++ + + + L+ + SY ++ +CKV + A + +M R
Sbjct: 329 FISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRG 388
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
I P++ T+ LI CK + L ++ G PD ++N++++ + + A
Sbjct: 389 IRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAF 448
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+ LS M GV P+ +TYNILI L G V + + ++ SPD+ TF +I F
Sbjct: 449 ELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGF 508
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
E+A FF M L PD + SAL+ ++ EA F M G D
Sbjct: 509 SNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADV 568
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
N ++ G ++A +V E GI
Sbjct: 569 ILYNSLIHGFCSLGNIDDACHLVSMMIEHGI 599
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 164/402 (40%), Gaps = 73/402 (18%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLA---YLKFQQMSV------------DQCK--- 42
+ +LGI P Y VID+L K + + A K QM V CK
Sbjct: 247 MKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGK 306
Query: 43 --------------PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILID 88
P+ F +N I +C G + +A ++ + M +G P+ ++YT ++
Sbjct: 307 SEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMA 366
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH--KAFELLIRFMEREP 146
G+C K ++ + L M +R + P+ AT L+ C P + E L + M E
Sbjct: 367 GYCKVKDISNALKYLGKMLKRGIRPSVATYTLLID---SCCKPGNMEMAEYLFQRMITEG 423
Query: 147 LTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
L +V NTL+ +A +L M G P+ T++ + L+ +NE
Sbjct: 424 LVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAK 483
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
ILD +RG P +V ++ +I F
Sbjct: 484 DILDELTRRGFSP-----------------------------------DVVTFTNIIGGF 508
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
+ A + M + + P++VT + L++G+C+ + + L +L+ G K D
Sbjct: 509 SNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADV 568
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+NS+I C +DA +S M+E G+ PN IT++ L+
Sbjct: 569 ILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALV 610
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/492 (25%), Positives = 215/492 (43%), Gaps = 73/492 (14%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T N ++ L + N I+ A++ + M + K + +T+NI+I+ +C+ G + +A
Sbjct: 185 GFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKA 244
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ME G P + TY L+ GF R+ ++ MK + P+ T
Sbjct: 245 KGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTY------ 298
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
N +L + N ASE +LR+M + G +P+
Sbjct: 299 -----------------------------NPILSWMCNEGRASE---VLREMKEIGLVPD 326
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S +++ + DL D +K+G+ P F TY
Sbjct: 327 SVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTY--------------------- 365
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
N +I N ++ A + RE+R++ I + VT+N LI+G+C+
Sbjct: 366 --------------NTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHG 411
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ K L ++ G +P +FT+ S+I LCR ++ +A + ++V G+ P+ + N
Sbjct: 412 DAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMN 471
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ CAIG++ R+ L ++M I+PD T+N L++ C K E+A + M
Sbjct: 472 TLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRR 531
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G++PD+ SY+ LI K G A M G NP T N +L+ L + E A
Sbjct: 532 GIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELA 591
Query: 485 HDIVKTSKERGI 496
++++ K GI
Sbjct: 592 EELLREMKSEGI 603
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 188/404 (46%), Gaps = 3/404 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I + +N +I+ L K + A M V KP TYN L+ G G ++ A
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
++ +M+ G+ P++ TY ++ CN R +EV R MKE + P+ + L+ G
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLRE---MKEIGLVPDSVSYNILIRGC 337
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
D AF +++ + NTL++ L + A ++R++ ++G + +S
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + D + + D + G++P TY L+ L + + E D
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
V + ++ N ++D C + MDRA + +EM I P+ VT+N L+ G C + +
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ REL+ + G KPD ++N++I + + A EM+ G P +TYN
Sbjct: 518 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNA 577
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
L++ L + + L ++M+++ I P+ +F ++I++ ++
Sbjct: 578 LLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLD 621
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 115/243 (47%), Gaps = 3/243 (1%)
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
+++++ C C++ M+D A E M+++ P T N +++ + + +
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
K + +TFN MI+ LC+ + + A L M +G+ P +TYN L++ G +
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+ + +M++ PD+ T+N ++ C + A + M +GL PD+ SY+ LI
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILI 334
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ +G + A M + G P YT N ++ L + + E A +++ +E+GI
Sbjct: 335 RGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIV 394
Query: 498 FKS 500
S
Sbjct: 395 LDS 397
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 137/305 (44%), Gaps = 18/305 (5%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P + YN +I + +++A+ +M P +TYN LIHG+ ++
Sbjct: 321 IGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEA 380
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L++++ G + TY ILI+G+C + F + + M + P + T SL++
Sbjct: 381 AEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIY 440
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ R +A EL + + + ++ NTL+ A ++L++M P
Sbjct: 441 VLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINP 500
Query: 184 ESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
+ D T CL+ GL E ++ +RG+KP +Y L+ +G +G
Sbjct: 501 D----DVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI-----SGYSKKG 551
Query: 240 DRYLNHVFKDRLVS-----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
D + +D ++S + +YN ++ K + A E+ REM+ I PN +F
Sbjct: 552 DTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFC 611
Query: 295 TLISG 299
++I
Sbjct: 612 SVIEA 616
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 3/203 (1%)
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
DR + + F+ L+ C+ V + E ++ E GF P T N ++ L R +R
Sbjct: 147 HDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRI 206
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
E+A ++M + N T+NI+I LC G + ++ M+ I P I T+N L
Sbjct: 207 ENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTL 266
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
+Q F +IE A M + G +PD +Y+ ++ + GR A + M++ G
Sbjct: 267 VQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGL 323
Query: 462 NPDSYTSNLILETLVQQGRFEEA 484
PDS + N+++ G E A
Sbjct: 324 VPDSVSYNILIRGCSNNGDLEMA 346
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%)
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+TI +++L+R C + V ++ F M+ P T N ++ R+N+IE A +
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M + ++ + ++++ +I L K G+ +AK ME G P T N +++ +
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 479 GRFEEAHDIVKTSKERG 495
GR E A I+ K +G
Sbjct: 274 GRIEGARLIISEMKSKG 290
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ + I+P YN ++ L + A +M KPD +YN LI G + G
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGD 552
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
A + +M LG+ P + TY L+ G + +L MK + PN+++ S
Sbjct: 553 TKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCS 612
Query: 121 LVHGVFRCLDPHKA 134
++ + LD K+
Sbjct: 613 VIEAMSN-LDAKKS 625
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/503 (23%), Positives = 221/503 (43%), Gaps = 35/503 (6%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N++++ LVK +++A + +M + D +T I++ G+C+ G V++ +L+++ G
Sbjct: 141 NSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWG 200
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G PN+ Y LIDG+C + + +K + P T ++++G +
Sbjct: 201 RGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEV 260
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
+LL+ ER + N ++ + EAA + M G P+ +T++ +T
Sbjct: 261 VDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILIT 320
Query: 194 CLVTGLDLNETCGILDTFIKRGV-----------------------------------KP 218
+ ++++ +L+ IKRG+ KP
Sbjct: 321 GSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKP 380
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
TY L+ L AG N + + ++ + N YN+++ CK + A +
Sbjct: 381 DLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLL 440
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
EM D+++AP+ TL+ G + + + ++L + +E G P +N+MI C+
Sbjct: 441 AEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKF 500
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+DAL C M++ P+ TY+ +I + D+ +LR+F M P++ T+
Sbjct: 501 GMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTY 560
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
LI FC I +AEK F ML+L L+P+ +Y+ LI K +A F M
Sbjct: 561 TLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLM 620
Query: 459 NGCNPDSYTSNLILETLVQQGRF 481
C P+ T N ++ L F
Sbjct: 621 EKCLPNDVTYNYLMNGLTNNVDF 643
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 208/479 (43%), Gaps = 38/479 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQ--MSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
P+ ++ VI +D A L+F + + + C PD F+ N L++ + + G V+ A
Sbjct: 99 PTREAFSLVISVFADCGLVDRA-LEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIAC 157
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
++ +M + YT I++ G C +V + ++++E R PN +L+ G
Sbjct: 158 KVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGY 217
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ D +A N L L KM +G+LP
Sbjct: 218 CKKGDTERA-------------------NVLFKEL--------------KM--KGFLPTV 242
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + +L +RG+ Y +++A +K G +E +
Sbjct: 243 KTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGW 302
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ K ++ +YN++I C + +A ++ + R + PN V++ LI +CK E
Sbjct: 303 MIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGE 362
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ +LL+ + E G KPD T+ ++I L A + AL ++MVE GV P+ YN+
Sbjct: 363 YLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNV 422
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L+ LC G + + L +M ++PD + L+ F R E+A+K F + G
Sbjct: 423 LMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKG 482
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ P Y+A+IK K G +A F M Q +PD +T + I++ ++ A
Sbjct: 483 IDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGA 541
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 183/407 (44%), Gaps = 38/407 (9%)
Query: 97 AEVFRVLEIMKERNVCPNEATVRSLVHGVFR-CLDPHKAFELLIRFME-REPLTQKLVCN 154
+EV +L+IMK +++ P SLV VF C +A E F++ + CN
Sbjct: 83 SEVESLLKIMKSKDLMPTREAF-SLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCN 141
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
+LL L + A + +M DR +YTV +V GL C
Sbjct: 142 SLLNVLVKHGKVEIACKVYDEMVDR----NGEVDNYTVCIMVKGL-----C--------- 183
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
K G+ +G + + + + N+ YN +ID +CK +RA
Sbjct: 184 -----------------KEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERA 226
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ +E++ + P + T+ +I+G CK + +LLV + E G +N++ID
Sbjct: 227 NVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDA 286
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
+ +A D + M++ G P+ TYNILI C+ G+V ++ +L ++ + P+
Sbjct: 287 QFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPN 346
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
++ LI ++C+ + +A M G +PD +Y+ALI LI +G D A
Sbjct: 347 KVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRN 406
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
M + G PD+ N+++ L ++GR A ++ ++ ++ +F
Sbjct: 407 KMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAF 453
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 163/382 (42%), Gaps = 12/382 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y +I K A +MS KPD TY LIHG+ G VD A
Sbjct: 342 GLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVA 401
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + +M G P+ Y +L+ G C R+ +L M ++NV P+ +LV G
Sbjct: 402 LTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDG 461
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R D +A +L +E+ + N ++ M +A ++M + P+
Sbjct: 462 FIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPD 521
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + + DL+ + +K KP TY LL+ +G ++
Sbjct: 522 EFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFK 581
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ RL NV +Y ++I CFCK + +A +M PN VT+N L++G +
Sbjct: 582 QMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNV 641
Query: 305 EV-------HKTRELLV-----MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+ +T LV M++ G+ ++NS++ CLC+ + AL +M+
Sbjct: 642 DFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMM 701
Query: 353 EWGVPPNTITYNILIRSLCAIG 374
G P+ ++ L+ LC G
Sbjct: 702 SKGFLPDPVSLVALLHGLCLEG 723
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 123/292 (42%), Gaps = 12/292 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P YNA+I K + A L F++M PD FTY+ +I G ++ + A
Sbjct: 482 GIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGA 541
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LR+ M PNV TYT+LI+GFC + + + + M + PN T L+
Sbjct: 542 LRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGC 601
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN---------SMASEAAAILRK 175
+ ++ KA + + + L + N L+ L+NN S +E + +L
Sbjct: 602 FCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLES 661
Query: 176 MG---DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK 232
G G+ +++++ + CL + + D + +G P + + L+ L
Sbjct: 662 FGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCL 721
Query: 233 AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
GR + + ++ +R + Y+ +D F A+ I + D+
Sbjct: 722 EGRSQDWNNVISCKLNERELQVAVKYSEKLDAFLSQGQTSEASLILHSLADQ 773
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 18/191 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGIC------- 56
L + P+ Y +I K ++ A F+QM +++C P+ TYN L++G+
Sbjct: 586 LRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVI 645
Query: 57 ---RIGVVDEALRL--VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNV 111
R + +L L M G+ +Y ++ C K V + + M +
Sbjct: 646 SNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGF 705
Query: 112 CPNEATVRSLVHGVFRCLDPH-KAFELLI--RFMEREPLTQKLVCNTLLYRLSNNSMASE 168
P+ ++ +L+HG+ CL+ + + +I + ERE L + + L + SE
Sbjct: 706 LPDPVSLVALLHGL--CLEGRSQDWNNVISCKLNERE-LQVAVKYSEKLDAFLSQGQTSE 762
Query: 169 AAAILRKMGDR 179
A+ IL + D+
Sbjct: 763 ASLILHSLADQ 773
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 175/391 (44%), Gaps = 35/391 (8%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
TYN LI CR G+++EA ++ M G P+++TY +I+G C R A +L M
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
+ P+ T NTLL
Sbjct: 63 LNIGLSPDTTTY-----------------------------------NTLLVESCRRDNF 87
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
SEA I +M +G +P+ +F + L++ K G+ P Y +L
Sbjct: 88 SEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVL 147
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
M + G +E + + + + V +V +YN +++ CK M+ A ++ EM +R
Sbjct: 148 MHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGA 207
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P+ TF TLI GHC+D + K L + + KPD +N++ID C+ E A +
Sbjct: 208 LPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASE 267
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
M+ + PN ITY ILI + C++G V+ + RL+ M I P + T N +I+ +C
Sbjct: 268 LWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYC 327
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
R KA++ M+ G+ PD+ SY+ LI
Sbjct: 328 RSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 162/344 (47%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
NTL+ + EA I+ M D+G P T++ + L GIL +
Sbjct: 5 NTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLN 64
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G+ P +TY L+ + E + + +V ++ S++ ++ F + +D+
Sbjct: 65 IGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQ 124
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A R+M+ + P+ V + L+ G+C++ + + ++ +LE G D +N++++
Sbjct: 125 ALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILN 184
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
LC+ DA EMVE G P+ T+ LI C G++ ++L LF M I P
Sbjct: 185 GLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKP 244
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
DI +N LI FC++ ++EKA + + M++ + P++ +Y LI A G EA + +
Sbjct: 245 DIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLW 304
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M + G P T N +++ + G +A + + +G++
Sbjct: 305 DVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVA 348
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 169/359 (47%), Gaps = 8/359 (2%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN +I A + ++ A+ M+ KP FTYN +I+G+C+ G A ++ +M
Sbjct: 4 YNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML 63
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF---RCL 129
+G +P+ TY L+ C +E + M + V P+ + SL+ VF R L
Sbjct: 64 NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLM-AVFSRNRHL 122
Query: 130 DPHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
D + R M++ L ++ L++ N EA I +M ++G + + +
Sbjct: 123 DQALVY---FRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAY 179
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ + L L + + D ++RG P F T+ L+ + G + + +
Sbjct: 180 NTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQ 239
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+ ++ +YN +ID FCKV M++A+E+ M R I PN +T+ LI+ +C V +
Sbjct: 240 RNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSE 299
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
L +++E G KP T N++I CR+ A + L M+ GV P+ I+YN LI
Sbjct: 300 AFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 177/399 (44%), Gaps = 39/399 (9%)
Query: 82 TYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF 141
TY LI +C + E F ++ M ++ + P+ T ++++G+
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGL---------------- 46
Query: 142 MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
C Y + A IL +M + G P+++T++ + +
Sbjct: 47 -----------CKKGRY--------ARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNF 87
Query: 202 NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
+E I +++GV P ++ LM + + Y + K LV + Y ++
Sbjct: 88 SEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVL 147
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
+ +C+ M A +I EM ++ +++ +NT+++G CK+ + +L ++E G
Sbjct: 148 MHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGA 207
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
PD +TF ++I C+ AL M + + P+ + YN LI C +G++ ++
Sbjct: 208 LPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASE 267
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
L+ M + +I P+ T+ LI ++C + + +A + + M+ G++P + + +IK
Sbjct: 268 LWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYC 327
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+SG +A + M G PD + N TL+ G+
Sbjct: 328 RSGDSSKADEFLGRMIAKGVAPDHISYN----TLINDGK 362
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 119/240 (49%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+YN +I +C+ +++ A EI M D+ + P+L T+N +I+G CK + + +L+ +
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
L G PD T+N+++ CR F +A + EM+ GV P+ ++++ L+ +
Sbjct: 63 LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
++L F+ M+ + PD + L+ +CR + +A K ML G D +Y+ +
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ L K +A + F M + G PD YT ++ Q G +A + T +R I
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 133/281 (47%), Gaps = 4/281 (1%)
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
TY L+ A + G E +N + L ++ +YN +I+ CK RA I EM
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+ ++P+ T+NTL+ C+ + +E+ +L G PD +F+S++ R
Sbjct: 63 LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+ AL +M ++G+ P+ + Y +L+ C G++ +L++ +M D+ +N +
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
+ C+ + A+K F M+ G PD ++++ LI + G +A F +M Q
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFP 502
PD N +++ + G E+A ++ + IS K FP
Sbjct: 243 KPDIVAYNTLIDGFCKVGEMEKASELW----DGMISRKIFP 279
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%)
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+VT+NTLI +C++ + + E++ + + G KP FT+N++I+ LC+ R+ A L
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
EM+ G+ P+T TYN L+ C + + + +F +M + PD+ +F++L+ F R
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
+++A F M GL PDN Y+ L+ ++G EA + M + GC D N
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180
Query: 470 LILETLVQQGRFEEAHDIVKTSKERG 495
IL L ++ +A + ERG
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERG 206
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 4/261 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P +++++ ++ +D A + F+ M PD Y +L+HG CR G + EA
Sbjct: 101 GVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEA 160
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ +M G +V Y +++G C K + + ++ + M ER P+ T +L+HG
Sbjct: 161 LKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHG 220
Query: 125 VFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
C D + KA L +R + NTL+ +A+ + M R
Sbjct: 221 --HCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIF 278
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T+ + + ++E + D I++G+KP T +++ ++G + D +
Sbjct: 279 PNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEF 338
Query: 243 LNHVFKDRLVSNVNSYNMVID 263
L + + + SYN +I+
Sbjct: 339 LGRMIAKGVAPDHISYNTLIN 359
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 131/295 (44%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP T YN ++ + ++ A F +M PD +++ L+ R +D+
Sbjct: 65 IGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQ 124
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL + M+ G P+ YT+L+ G+C + E ++ + M E+ + ++++
Sbjct: 125 ALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILN 184
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + A +L +ER L TL++ + ++A ++ M R P
Sbjct: 185 GLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKP 244
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + ++ + + D I R + P TY +L+ A G E R
Sbjct: 245 DIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLW 304
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + + + + N VI +C+ +A E M + +AP+ +++NTLI+
Sbjct: 305 DVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%)
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TYN LI + C G + + + M + P ++T+NA+I C+ + +A+
Sbjct: 2 VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
ML +GL PD +Y+ L+ + F EAK+ F M + G PD + + ++ +
Sbjct: 62 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121
Query: 481 FEEAHDIVKTSKERGI 496
++A + K+ G+
Sbjct: 122 LDQALVYFRDMKKFGL 137
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 198/446 (44%), Gaps = 13/446 (2%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
YN ++ G CR+G V+ A RL + PN YTY ++ G C R+A+ VL+ M
Sbjct: 87 YNAMVAGYCRVGQVEAARRLAAAVP---VPPNAYTYFPVVRGLCGRGRIADALAVLDEMT 143
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
R+ P ++ R A +L + CN ++ + +
Sbjct: 144 SRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVD 203
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK----------RGVK 217
E +LRK+ G + +++ + L + ++D +K G
Sbjct: 204 EGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCT 263
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
P Y +++ + K G + L+ + L NV YN V+ C + ++A E+
Sbjct: 264 PDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEEL 323
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
EM ++ + VTFN L+ C++ V + ELL +LE G PD T+ ++I+ C+
Sbjct: 324 LTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCK 383
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
++A+ L M G PNTI+Y I+++ LC+ + L +M P+ T
Sbjct: 384 EGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVT 443
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
FN +I C+ +E+A + ML G PD SYS +I L K+G+ +EA + M
Sbjct: 444 FNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMI 503
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEE 483
G P+ T + + L ++GR ++
Sbjct: 504 NKGITPNVITYSSMAFALAREGRIDK 529
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/486 (21%), Positives = 224/486 (46%), Gaps = 17/486 (3%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YNA++ + ++ A + V P+ +TY ++ G+C G + +AL ++ +M
Sbjct: 87 YNAMVAGYCRVGQVEAARRLAAAVPV---PPNAYTYFPVVRGLCGRGRIADALAVLDEMT 143
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF--RCLD 130
P Y ++I+ C + + RVLE + + + +++ + C+D
Sbjct: 144 SRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVD 203
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAI----------LRKMGDRG 180
+ E+L + + N +L L + + L +M G
Sbjct: 204 --EGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHG 261
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ + + + IL G+KP Y +++ + A R + +
Sbjct: 262 CTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAE 321
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L +++ + ++N+++D FC+ ++DR E+ +M + P+++T+ T+I+G
Sbjct: 322 ELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGF 381
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ + + LL + CG KP+ ++ ++ LC R+ DA + +S M++ G PN
Sbjct: 382 CKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNP 441
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+T+N +I LC G V +++ L ++M + +PD+ +++ +I + K E+A +
Sbjct: 442 VTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNV 501
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ G+ P+ +YS++ AL + GR D+ Q F +++ D+ N ++ +L ++
Sbjct: 502 MINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRE 561
Query: 481 FEEAHD 486
+ A D
Sbjct: 562 TDLAID 567
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 220/494 (44%), Gaps = 51/494 (10%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P +Y+ +I++ +S A + + D N++I+ IC G VDE L +
Sbjct: 149 PIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEM 208
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKR----------VAEVFRVLEIMKERNVCPNEAT 117
++++ G ++ +Y ++ G C AKR + +V L M + P+
Sbjct: 209 LRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRM 268
Query: 118 VRSLVHGVFRCLDPHK--AFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILR 174
+++ G+ C + H A E+L R M L +VC NT+L + + +A +L
Sbjct: 269 YATIIDGI--CKEGHHEVANEILSR-MPSYGLKPNVVCYNTVLKGICSADRWEKAEELLT 325
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
+M + + TF+ V D F + G+ R + L+E + + G
Sbjct: 326 EMYQKNCPLDDVTFNILV----------------DFFCQNGLVDRV---IELLEQMLEHG 366
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
+ +V +Y VI+ FCK ++D A + + M PN +++
Sbjct: 367 ----------------CMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYT 410
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
++ G C EL+ +++ G P+ TFN++I+ LC+ E A++ L +M+
Sbjct: 411 IVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVN 470
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G P+ I+Y+ +I L G +L L M I+P++ T++++ + R +I+K
Sbjct: 471 GCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKV 530
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
+ F ++ +R D Y+A+I +L K D A M NGC P+ T +++
Sbjct: 531 IQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKG 590
Query: 475 LVQQGRFEEAHDIV 488
L +G EA D++
Sbjct: 591 LASEGLLCEAQDLL 604
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 175/391 (44%), Gaps = 16/391 (4%)
Query: 13 YNAVIDALVKS----------NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
YNAV+ L + + + + QM+ C PD Y +I GIC+ G +
Sbjct: 224 YNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHE 283
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCP-NEATVRSL 121
A ++ +M G PNV Y ++ G C+A R + +L M ++N CP ++ T L
Sbjct: 284 VANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKN-CPLDDVTFNIL 342
Query: 122 VHGVFRCLDP--HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
V F C + + ELL + +E + + T++ + EA +L+ M
Sbjct: 343 VD--FFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSC 400
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G P + ++ + L + + ++ I++G P T+ ++ L K G +
Sbjct: 401 GCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQA 460
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L + + ++ SY+ VID K + A E+ M ++ I PN++T++++
Sbjct: 461 IELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFA 520
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
++ + K ++ + + + D +N++I LC+ + A+D L+ MV G PN
Sbjct: 521 LAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPN 580
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADR 390
TY LI+ L + G + + L ++ + R
Sbjct: 581 ESTYTALIKGLASEGLLCEAQDLLSELCSRR 611
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 140/309 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN V+ + ++ + A +M C D T+NIL+ C+ G+VD
Sbjct: 296 GLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRV 355
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L++QM G P+V TYT +I+GFC + E +L+ M PN + ++ G
Sbjct: 356 IELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKG 415
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A EL+ R +++ L + NT++ L + +A +L++M G P+
Sbjct: 416 LCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPD 475
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + L E +L+ I +G+ P TY + AL + GR + + +
Sbjct: 476 LISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFD 535
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
++ + S+ YN VI CK D A + M PN T+ LI G +
Sbjct: 536 NIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEG 595
Query: 305 EVHKTRELL 313
+ + ++LL
Sbjct: 596 LLCEAQDLL 604
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 151/347 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P R+Y +ID + K ++A +M KP+ YN ++ GIC ++A
Sbjct: 261 GCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKA 320
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M + T+ IL+D FC V V +LE M E P+ T ++++G
Sbjct: 321 EELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVING 380
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A LL + +L L + +A ++ +M +G LP
Sbjct: 381 FCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPN 440
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + L + + +L + G P +Y +++ L KAG+ E LN
Sbjct: 441 PVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLN 500
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + NV +Y+ + + +D+ ++ ++D I + V +N +IS CK
Sbjct: 501 VMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRR 560
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
E + L ++ G P++ T+ ++I L +A D LSE+
Sbjct: 561 ETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSEL 607
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P+ Y+++ AL + ID F + + D YN +I +C+ D A
Sbjct: 506 GITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLA 565
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL-EIMKERNV 111
+ + M G PN TYT LI G + + E +L E+ R V
Sbjct: 566 IDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSRRAV 613
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 210/491 (42%), Gaps = 71/491 (14%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS + N I LVK ++ A ++M V KPD TYN LI G C + +++A
Sbjct: 265 GVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDA 324
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM-KERNVCPNEATVRSLVH 123
L L+ + G P+ +Y ++ C K++ EV ++E M N+ P++ T
Sbjct: 325 LELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTY----- 379
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
NTL++ LS + A +A A L++ D+G+
Sbjct: 380 ------------------------------NTLIHMLSKHGHADDALAFLKEAQDKGFHI 409
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ + V ++E ++ RG P
Sbjct: 410 DKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNP------------------------- 444
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+V +Y ++D FC++ +D A +I ++M PN V++ L++G C
Sbjct: 445 ----------DVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHS 494
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + RE++ + E + P+ T+ +++ L R + +A D EMVE G P +
Sbjct: 495 GKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEI 554
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+LI+SLC V + + ++ + ++ F +I FC++ +E A M
Sbjct: 555 NLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYL 614
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G PD +Y+AL AL K GR DEA + + M G +P T ++ Q GR ++
Sbjct: 615 SGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDD 674
Query: 484 AHDIVKTSKER 494
++++ +R
Sbjct: 675 MLNLLEKMLKR 685
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 169/346 (48%), Gaps = 1/346 (0%)
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
+V T+L LS + A +LR M RG F Y + L +L
Sbjct: 201 VVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTL 260
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
K GV+P S + L K G+ + ++L + + ++ +YN +I +C +N
Sbjct: 261 MQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNR 320
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL-VMLLECGFKPDKFTFN 329
++ A E+ + + P+ V++ T++ CK+ ++ + + L+ M+ PD+ T+N
Sbjct: 321 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYN 380
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++I L + +DAL L E + G + + Y+ ++ S C G + + L M +
Sbjct: 381 TLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 440
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+PD+ T+ A++ FCR+ +I++A+K M G +P+ SY+AL+ L SG+ EA
Sbjct: 441 GCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA 500
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
++ E++ P++ T ++ L ++G+ EA D+ + E+G
Sbjct: 501 REMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKG 546
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/452 (19%), Positives = 202/452 (44%), Gaps = 5/452 (1%)
Query: 48 YNILIHGICRIGVVDEALRLVKQM--EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEI 105
Y ++ + + + A R+++ M G+ P + Y ++ + A ++ RVL +
Sbjct: 203 YYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMV--SYSRAGKLRNALRVLTL 260
Query: 106 MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSM 165
M++ V P+ + + ++ + + KA + L R + N+L+ + +
Sbjct: 261 MQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNR 320
Query: 166 ASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI-KRGVKPRFSTYL 224
+A ++ + +G P+ ++ + L + E +++ + + P TY
Sbjct: 321 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYN 380
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
L+ L K G + +L + Y+ ++ FC+ MD A + +M R
Sbjct: 381 TLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 440
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
P++VT+ ++ G C+ + + +++L + + G KP+ ++ ++++ LC + + +A
Sbjct: 441 GCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA 500
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
+ ++ E PN ITY ++ L G ++ + L ++M P N LIQS
Sbjct: 501 REMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQS 560
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
C+ K+ +A+K L G + +++ +I + G + A M +G +PD
Sbjct: 561 LCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPD 620
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ T + + L ++GR +EA +++ +G+
Sbjct: 621 AVTYTALFDALGKKGRLDEAAELIVKMLSKGL 652
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 210/460 (45%), Gaps = 9/460 (1%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
NA++ L + I +M + +P T+ IL++ +C+ +DEAL++ ++ G
Sbjct: 285 NALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRG 344
Query: 74 ------LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVHGVF 126
+G P+V + LIDG C + + +LE MK N+ PN T L+ G F
Sbjct: 345 KGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFF 404
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + +A EL + E + NTL+ L + A +M +G ++
Sbjct: 405 KAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAA 464
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ ++ ++N + + G P Y L+ L AGR + ++ +
Sbjct: 465 TYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKL 524
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ + YN++I FCK ++R E+ EM + + P+ +T+NTLIS K +
Sbjct: 525 KLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDF 584
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG-VPPNTITYNI 365
+++ +++ G +P T+ ++I C ++ + EM VPPNT+ YNI
Sbjct: 585 ATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNI 644
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI +LC DV R++ L + M+ R+ P+ T+NA+++ + KA + M+
Sbjct: 645 LIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEA 704
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
RPD + L + L G ++ K F+ Q+ P S
Sbjct: 705 CRPDYITMEVLTEWLSAVGEIEKLKH-FVEGYQDSSYPAS 743
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 201/478 (42%), Gaps = 25/478 (5%)
Query: 26 IDLAYLKFQQMSVDQCKPDRFTYNILIHGICRI----GVVDEALRLVKQMEGLGYAPNVY 81
++ + L F Q+ P L HG+ R+ G +AL ++ +M +V
Sbjct: 157 VNDSLLLFNQLDPSSKSPQ------LCHGLLRVLLKSGRAGDALHVLDEMPQANSGFSV- 209
Query: 82 TYTILIDGFCNAKRV---AEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK--AFE 136
T I+ + R EV ++ + ER V P+ + LV + C D A+E
Sbjct: 210 TGEIVFGELVRSGRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKL--CGDQKNGVAWE 267
Query: 137 LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLV 196
+L M CN LL L +L +M R P TF V L
Sbjct: 268 VLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLC 327
Query: 197 TGLDLNETCGILDTFIKRG------VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
++E + D +G V+P + L++ L K G++ +G L +
Sbjct: 328 KARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGN 387
Query: 251 L-VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
+ N +YN +ID F K DRA E+ R+M + + PN++T NTL+ G CK VH+
Sbjct: 388 INRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRA 447
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
E + G K + T+ ++I C + A+ C EM+ G P+ + Y LI
Sbjct: 448 VEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISG 507
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
LC G + + + K++ S D +N LI FC+ K+E+ + M G++PD
Sbjct: 508 LCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPD 567
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+Y+ LI L K+G F A + M + G P T I+ + +E I
Sbjct: 568 TITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKI 625
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 200/450 (44%), Gaps = 37/450 (8%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D + N L+ + R + L+ +ME P+V T+ IL++ C A+R+ E +V
Sbjct: 280 DAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVF 339
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
+ ++ + ++ EP ++ NTL+ L
Sbjct: 340 DRLRGKGGS---------------------------NWVGVEP--DVVLFNTLIDGLCKV 370
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPR 219
+ ++L +M G + +T Y CL+ G + + + + GV+P
Sbjct: 371 GKEEDGLSLLEEM-KMGNINRPNTVTYN--CLIDGFFKAGNFDRAHELFRQMNEEGVQPN 427
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
T L++ L K GR + N + L N +Y +I FC VN ++RA +
Sbjct: 428 VITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFE 487
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
EM +P+ V + +LISG C ++ ++ L GF D+ +N +I C+
Sbjct: 488 EMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKK 547
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ E + L+EM E GV P+TITYN LI L GD A + ++ +KM + + P + T+
Sbjct: 548 KLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYG 607
Query: 400 ALIQSFCRMNKIEKAEKAFFSML-TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
A+I ++C +++ K F M T + P+ Y+ LI AL ++ D A M+
Sbjct: 608 AIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKV 667
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
P++ T N IL+ + + +A +++
Sbjct: 668 KRVRPNTTTYNAILKGVRDKKMLHKAFELM 697
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 194/452 (42%), Gaps = 23/452 (5%)
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNV---CPNEA 116
+V+++L L Q++ +P + + + + R + VL+ M + N E
Sbjct: 156 LVNDSLLLFNQLDPSSKSPQLCHGLLRV--LLKSGRAGDALHVLDEMPQANSGFSVTGEI 213
Query: 117 TVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
LV R + L+ + ER L+ +L + A +L +
Sbjct: 214 VFGELVRS-GRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCV 272
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
G ++++ + +T L G D+ +L KR ++P T+ +L+ L KA R
Sbjct: 273 MRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRI 332
Query: 237 VEGDRYLNHVFKDRLVSNVNS-----------YNMVIDCFCKVNMMDRATEICREMRDRD 285
E + VF DRL S +N +ID CKV + + EM+ +
Sbjct: 333 DEALQ----VF-DRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGN 387
Query: 286 IA-PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
I PN VT+N LI G K + EL + E G +P+ T N+++D LC+ R A
Sbjct: 388 INRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRA 447
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
++ +EM G+ N TY LI + C + ++ R+++ F++M + SPD + +LI
Sbjct: 448 VEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISG 507
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
C ++ A + G D Y+ LI K + + + ME+ G PD
Sbjct: 508 LCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPD 567
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ T N ++ L + G F A +++ + G+
Sbjct: 568 TITYNTLISYLGKTGDFATASKVMEKMIKEGL 599
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 173/394 (43%), Gaps = 3/394 (0%)
Query: 2 SFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQC-KPDRFTYNILIHGICRIGV 60
+++G+ P L+N +ID L K + ++M + +P+ TYN LI G + G
Sbjct: 349 NWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGN 408
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
D A L +QM G PNV T L+DG C RV MK + + N AT +
Sbjct: 409 FDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTA 468
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ + ++A + + +V +L+ L ++A+ ++ K+ G
Sbjct: 469 LISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAG 528
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ + S ++ ++ L +L + GVKP TY L+ L K G
Sbjct: 529 FSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATAS 588
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM-RDRDIAPNLVTFNTLISG 299
+ + + K+ L +V +Y +I +C +D +I EM + PN V +N LI
Sbjct: 589 KVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDA 648
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
C++ +V + L+ + +P+ T+N+++ + A + + MVE P+
Sbjct: 649 LCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPD 708
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
IT +L L A+G++ + L+ F + D P
Sbjct: 709 YITMEVLTEWLSAVGEIEK-LKHFVEGYQDSSYP 741
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 174/378 (46%), Gaps = 24/378 (6%)
Query: 138 LIRFMEREPLTQK-LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLV 196
L+ F + +P ++ +C+ LL L + A +A +L +M P++++ ++VT +
Sbjct: 161 LLLFNQLDPSSKSPQLCHGLLRVLLKSGRAGDALHVLDEM------PQANS-GFSVTGEI 213
Query: 197 TGLDL---------NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+L E G++ +RGV P L+ L ++ L+ V
Sbjct: 214 VFGELVRSGRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVM 273
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ + S N ++ + + R E+ EM R I P++VTF L++ CK +
Sbjct: 274 RLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRID 333
Query: 308 KTRELLVMLLE------CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP-PNT 360
+ ++ L G +PD FN++ID LC+ + ED L L EM + PNT
Sbjct: 334 EALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNT 393
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TYN LI G+ R+ LF++M + + P++ T N L+ C+ ++ +A + F
Sbjct: 394 VTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNE 453
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M GL+ + +Y+ALI A + A Q F M +GC+PD+ ++ L GR
Sbjct: 454 MKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGR 513
Query: 481 FEEAHDIVKTSKERGISF 498
+A +V K G S
Sbjct: 514 MNDASVVVSKLKLAGFSL 531
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 65/179 (36%), Gaps = 36/179 (20%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNIL--------- 51
+ G S YN +I K ++ Y +M KPD TYN L
Sbjct: 524 LKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGD 583
Query: 52 --------------------------IHGICRIGVVDEALRLVKQM-EGLGYAPNVYTYT 84
IH C VDE +++ +M PN Y
Sbjct: 584 FATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYN 643
Query: 85 ILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME 143
ILID C V ++E MK + V PN T +++ GV HKAFEL+ R +E
Sbjct: 644 ILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVE 702
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/528 (24%), Positives = 223/528 (42%), Gaps = 38/528 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNI-LIHGICRIGVVDE 63
G P + +VI A VK ++ A L+ + V+ K L+ G C G +
Sbjct: 105 GWIPPEGTFTSVITACVKEGNVAEA-LRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRS 163
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL LV ++ G PN TY++LIDG C + + F MK + + + ++ S++
Sbjct: 164 ALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILE 223
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G +C AF + +E L NTLL L +EA + ++ +G P
Sbjct: 224 GYLKCQSWQNAFTMFNDALE-SGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISP 282
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK----------- 232
+++ + ++N C + + G P T+ +LM+ +K
Sbjct: 283 NVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIF 342
Query: 233 ------------------------AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
AGR EG N V YN +ID F K
Sbjct: 343 HRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKE 402
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
++ A+ + REM + I P+ VT+ +LI G CK + +LL + G K D +
Sbjct: 403 GNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAY 462
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
++ID C+ + A + L+E+ G+ PN YN +I + +V ++ L++KM
Sbjct: 463 GTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVN 522
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ I D+ T+ +LI + ++ A ML+ G+ PD+ +++ LI L G+F+
Sbjct: 523 EGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFEN 582
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
A++ M P N ++ ++G +EA + +RG+
Sbjct: 583 ARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGL 630
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 198/443 (44%), Gaps = 2/443 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI S N++++ +K S A+ F +++ + FT+N L+ +C+ G ++EA
Sbjct: 210 GIRSSVYSLNSILEGYLKCQSWQNAFTMFND-ALESGLANVFTFNTLLSWLCKEGKMNEA 268
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++ G +PNV +Y +I G C + +V + M + PN T L+ G
Sbjct: 269 CNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDG 328
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ D AF + R + L ++ L + E + K +G++P
Sbjct: 329 YFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPT 388
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + + ++N + + G+ P TY L++ K + LN
Sbjct: 389 CMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLN 448
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L ++ +Y +ID FCK M A E+ E+R ++PN +N++I+G
Sbjct: 449 DMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMN 508
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V + +L ++ G D T+ S+ID L ++ R A D +EM+ G+ P+ +
Sbjct: 509 NVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHT 568
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI LC G + ++ + M + P + +N LI + +++A + ML
Sbjct: 569 VLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDR 628
Query: 425 GLRPDNFSYSALIKALIKS-GRF 446
GL PDN +Y L+ K G F
Sbjct: 629 GLVPDNITYDILVNGKFKGDGNF 651
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 207/493 (41%), Gaps = 38/493 (7%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR-------------------------- 66
++M P T+ +I + G V EALR
Sbjct: 98 LREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCM 157
Query: 67 ---------LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
LV ++ G PN TY++LIDG C + + F MK + + + +
Sbjct: 158 QGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYS 217
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
+ S++ G +C AF + +E L NTLL L +EA + ++
Sbjct: 218 LNSILEGYLKCQSWQNAFTMFNDALE-SGLANVFTFNTLLSWLCKEGKMNEACNLWDEVI 276
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
+G P +++ + ++N C + + G P T+ +LM+ +K G D+
Sbjct: 277 AKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKG-DI 335
Query: 238 EGDRYLNHVFKD-RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
E + H KD ++ + ++I CK ++ + + P + +NT+
Sbjct: 336 ENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTI 395
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
I G K+ ++ + + E G P T+ S+ID C+ + + AL L++M G+
Sbjct: 396 IDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGL 455
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
+ Y LI C D+ + L +++ +SP+ + +N++I F MN +E+A
Sbjct: 456 KMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAID 515
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
+ M+ G+ D +Y++LI L+KSGR A M G PD +++ L
Sbjct: 516 LYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLC 575
Query: 477 QQGRFEEAHDIVK 489
+G+FE A I++
Sbjct: 576 NKGQFENARKILE 588
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/496 (19%), Positives = 200/496 (40%), Gaps = 1/496 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++PS + N ++ A+V+ N A +M + D FT ++++ + G + EA
Sbjct: 1 MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ Q + G + Y+I + C +L M+ P E T S++
Sbjct: 61 QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ + +A L + V +L+ A ++ ++ + G +P
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + ++ + +G++ + ++E K N
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ L +NV ++N ++ CK M+ A + E+ + I+PN+V++N +I GHC+
Sbjct: 241 ALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDN 299
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
++ ++ +L+ GF P+ TF ++D + E+A M + + P T I
Sbjct: 300 INAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGI 359
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+I+ LC G LF K + P +N +I F + I A + M +G
Sbjct: 360 IIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVG 419
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ P +Y++LI K D A + M++ G D +++ ++ + AH
Sbjct: 420 ITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAH 479
Query: 486 DIVKTSKERGISFKSF 501
+++ + G+S F
Sbjct: 480 ELLNELRGAGLSPNRF 495
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 222/497 (44%), Gaps = 40/497 (8%)
Query: 3 FLGISPSTRL--YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
L ISP+ + +N ++ +LVK N A F+Q+ + KP T IL++ C G
Sbjct: 1 MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ ++ ++ +GY PN T+T LI G C + E + + ++ +
Sbjct: 61 ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L++G+ + + A ++L + + ++ +T++ L ++A + +M +G
Sbjct: 121 LMNGLCKMGETRAAMQMLRKTWVNADV---VMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P TF V L + +L +K+GVKP
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKP---------------------- 215
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
NV +Y ++D +C VN +++A I M + PN+ +N +I+G
Sbjct: 216 -------------NVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGL 262
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK V + L + PD T+N +ID LC+ + +L+ + EM G +
Sbjct: 263 CKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDI 322
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITYN L+ +LC + +++ L ++++ I P++ T+ LI C+ ++E A F
Sbjct: 323 ITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQE 382
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+LT G ++Y+ +I L K G FDEA ME N C PD+ + I+ L ++G
Sbjct: 383 ILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGE 442
Query: 481 FEEAHDIVKTSKERGIS 497
+ + ++ RG+S
Sbjct: 443 TVKTNKLLCAMIVRGLS 459
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 104/216 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN +I+ L K +D A F++M + PD TYNILI G+C++G + +
Sbjct: 247 GVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTS 306
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L LV +M +G ++ TY L+ C + + +++ +K++ + PN T +L+ G
Sbjct: 307 LELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDG 366
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A+ + + N ++ L + EA A+L +M D +P+
Sbjct: 367 LCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPD 426
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
+ +++ + L + +T +L I RG+ R
Sbjct: 427 AVSYETIIYALSEKGETVKTNKLLCAMIVRGLSKRL 462
>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 827
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/471 (24%), Positives = 219/471 (46%), Gaps = 8/471 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y+ I L K +++ A + + + + ++N +I+G C+ G V EA
Sbjct: 351 GEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEA 410
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+++++M+ G P+VY+Y+ILI+ FC V + ++E M+ + P+ + SL+HG
Sbjct: 411 LQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHG 470
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A ++ V TL+ A +L +M +P
Sbjct: 471 LCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPT 530
Query: 185 SSTFDYTVTCLVTGLD----LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ ++ L+ G ++ + + ++ G+ P +++ +AG E
Sbjct: 531 A----FSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEAL 586
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L + N +SYN +I CK +RA E+ M R++ P++V ++TLISG
Sbjct: 587 TLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGF 646
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K + + L +++ G + T+ ++ +H+ +A EM E G+ +
Sbjct: 647 AKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQ 706
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
I+Y LI C ++ ++ LF++M + SP++ T+ +I FC+ N+I+ A F
Sbjct: 707 ISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDK 766
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
M + PD +Y+ LI K G FD+A + + M+ G PD T N++
Sbjct: 767 MNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 208/462 (45%), Gaps = 14/462 (3%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
KP TY+ IHG+C++G V+ AL L++ + N +++ +I GFC V E +
Sbjct: 353 KPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQ 412
Query: 102 VLEIMKERNVCPNEATVRSLVHG------VFRCLDPHKAFELLIRFMEREPLTQKLVCNT 155
VLE MK + P+ + L++ V +CLD L+ ME + +V T
Sbjct: 413 VLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLD-------LMEEMEHSQIKPSIVSYT 465
Query: 156 -LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
L++ L +M A I +G +S+ ++ + D++ +L+ I
Sbjct: 466 SLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICN 525
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
+ P + L+ YK G + N + +D + + + N ++D C+ A
Sbjct: 526 ELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEA 585
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ + ++ N ++N +I CK+ + ELL +L+ P ++++I
Sbjct: 586 LTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISG 645
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
+ F+ A++ + MV+ G+ N TY IL+ + + +F++M+ + D
Sbjct: 646 FAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLD 705
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
++ LI FC +++KA F M G P+ +Y+ +I KS R D A F
Sbjct: 706 QISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFD 765
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M ++ PD T ++++ + G F++AH + K++G+
Sbjct: 766 KMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGV 807
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/476 (23%), Positives = 207/476 (43%), Gaps = 14/476 (2%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ S +++ +I ++ ++ A F +PD T N L+ + V+
Sbjct: 243 VERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVR 302
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCN------AKRVAEVFRVLEIMKERNVCPNEATVR 119
R+ ++++ G +PN+YTYTI+++ +C+ R A V +L + P T
Sbjct: 303 RVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAV--ILGKIYRSGEKPTVVTYS 360
Query: 120 SLVHGVFRCLDPHKAFELLIRFME--REPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
+ +HG+ + + A +LIR + +PL N ++Y EA +L +M
Sbjct: 361 TYIHGLCKVGNVEAAL-MLIRNLHYTNQPLNSHSF-NDVIYGFCKRGEVFEALQVLEEMK 418
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
G LP+ ++ + D+ + +++ +KP +Y L+ L K
Sbjct: 419 SSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQ 478
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ + + Y +ID FC MD A ++ EM ++ P + +LI
Sbjct: 479 NAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLI 538
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G+ K + E+ +L G PD N ++D CRA F++AL L + E G
Sbjct: 539 RGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFN 598
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
N +YN +I LC G R+L L +M + P + ++ LI F + + ++A
Sbjct: 599 LNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNL 658
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD--SYTSNLI 471
F M+ +G+ + +Y+ L+ S + EA F M++ G D SYT+ ++
Sbjct: 659 FTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIV 714
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 190/435 (43%), Gaps = 27/435 (6%)
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCP--NEATVRSLVHGVFRC 128
+E G++ ++ + I++ F A EV+ +L R++ NEA
Sbjct: 183 VECHGFSHSISCFRIIVHAFALAGMRLEVWALL-----RDIVGFCNEAK----------- 226
Query: 129 LDPHKAFELLIRFMEREPLTQK--LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ FEL F++ ++ +V + L+ ++NSM A + G P+
Sbjct: 227 ---YDTFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIR 283
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL-YKAGRDV---EGDRY 242
T ++ + CLV + + + RG P TY ++M G D +
Sbjct: 284 TCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVI 343
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L +++ V +Y+ I CKV ++ A + R + + N +FN +I G CK
Sbjct: 344 LGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCK 403
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
EV + ++L + G PD ++++ +I+ C LD + EM + P+ ++
Sbjct: 404 RGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVS 463
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y LI LC + ++ +F + A D + LI FC ++ A K M+
Sbjct: 464 YTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMI 523
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
L P FS +LI+ K G FD+A + F +M ++G PD+ N IL+ + G F+
Sbjct: 524 CNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFK 583
Query: 483 EAHDIVKTSKERGIS 497
EA +++ +E G +
Sbjct: 584 EALTLLEDFQEHGFN 598
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/485 (20%), Positives = 186/485 (38%), Gaps = 66/485 (13%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
+++LI +++ AL + + +G P++ T L+ A RV V RV E +
Sbjct: 249 VFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEEL 308
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
K+R PN T +++ F C D + ++
Sbjct: 309 KDRGPSPNIYTYTIMMN--FYCSD-----------------------------VGCDAGM 337
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
+AA IL K+ G P T+ + L ++ ++ ++ +
Sbjct: 338 RQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDV 397
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ K G E + L + ++ +V SY+++I+ FC + + ++ EM I
Sbjct: 398 IYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQI 457
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC---------- 336
P++V++ +LI G CK + ++ + K D + ++ID C
Sbjct: 458 KPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIK 517
Query: 337 -------------------------RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
+ F+ AL+ + M+ G+ P+TI N ++ C
Sbjct: 518 LLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSC 577
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
G +L L + Q + + +++NA+I C+ E+A + ML + P
Sbjct: 578 RAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVV 637
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
+YS LI K F A F M + G + T +++ + EA+ I K
Sbjct: 638 NYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEM 697
Query: 492 KERGI 496
KERG+
Sbjct: 698 KERGL 702
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 7/140 (5%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI+ + Y ++ S+ + AY F++M D+ +Y LI G C + +
Sbjct: 665 VGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKK 724
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV- 122
A L ++M G +PNV TYT +IDGFC + R+ V + M +V P+ T L+
Sbjct: 725 AWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLID 784
Query: 123 ----HGVFRCLDPHKAFELL 138
HG F HK ++++
Sbjct: 785 WYHKHGYFD--QAHKLYDVM 802
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/484 (23%), Positives = 212/484 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T YNA++ K+ A ++M + C D TYN L+ R G +E
Sbjct: 333 GYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEG 392
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ M G PN TYT +I+ + A + + ++ MK+ PN T S++
Sbjct: 393 ATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILAL 452
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + ++L ++ NTLL + + R+M + G+ P
Sbjct: 453 LGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPG 512
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ ++ + + D +K G P +TY L+ AL + G + L
Sbjct: 513 KDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLL 572
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ N S+++++ C+ K + I +++ D I P+ V TLI + K
Sbjct: 573 DMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCR 632
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V L++ G+KPD FNSM+ + + +E A L + E G+ P+ +TYN
Sbjct: 633 AVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYN 692
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ G+ ++ + + + SPD+ ++N +I+ FCR +++A + M T
Sbjct: 693 SLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTR 752
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ P F+Y+ + G F E + M Q C P+ T +I++ + ++++A
Sbjct: 753 GICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDA 812
Query: 485 HDIV 488
D +
Sbjct: 813 MDFI 816
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/521 (23%), Positives = 234/521 (44%), Gaps = 42/521 (8%)
Query: 16 VIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLG 75
+I L + + +A ++ +D+ D ++H R G +A+ + ++M+ G
Sbjct: 203 MIRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCG 262
Query: 76 YAPNVYTYTILIDGFCNAKRVAE-VFRVLEIMKERNVCPNEATVRSLVHGVFR--CLDPH 132
+P++ TY +++D + R + + +L+ M+ + +E T +++ R ++
Sbjct: 263 LSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEA 322
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
K F + ++ EP T + N LL + SEA IL++M D +S T++ V
Sbjct: 323 KEFFVELKSSGYEPGT--VTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELV 380
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
V E ++DT ++GV P TY ++ A +AG++V+ + N + K V
Sbjct: 381 AAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCV 440
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK-TRE 311
NV +YN ++ K + + +I +MR PN +T+NTL++ C D HK
Sbjct: 441 PNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLA-MCGDKGKHKFVNH 499
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
+ + CGF+P K TFN++I R DA EM++ G P TYN L+ +L
Sbjct: 500 VFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALA 559
Query: 372 AIGD--VARSLRLFQKMQA------------------------DRISPDIYT-------- 397
GD A S+ L + + +RI DIY
Sbjct: 560 RRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWV 619
Query: 398 -FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
LI + + + E+AF ++ G +PD +++++ K+ ++ A++ +
Sbjct: 620 LLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLI 679
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
++G PD T N ++ ++G +A +I+K + G S
Sbjct: 680 RESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGES 720
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 187/433 (43%), Gaps = 2/433 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y VI+A ++ A F QM C P+ TYN ++ + + +E
Sbjct: 403 GVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEM 462
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++++ M G PN T+ L+ + + V V MK P + T +L+
Sbjct: 463 IKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISA 522
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
RC A ++ M+ N LL L+ A ++L M ++G+ P
Sbjct: 523 YGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPN 582
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG-DRYL 243
++F + C G ++ I + P + L+ A +K R V G +R
Sbjct: 583 ETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKC-RAVRGMERAF 641
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ K+ ++ +N ++ F K NM +RA ++ +R+ + P+LVT+N+L++ + +
Sbjct: 642 EELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARR 701
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E K E+L L++ G PD ++N++I CR ++A+ +SEM G+ P TY
Sbjct: 702 GECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTY 761
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N + G A + M P+ T+ ++ +C+ K + A F +
Sbjct: 762 NTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDAMDFIFGIKN 821
Query: 424 LGLRPDNFSYSAL 436
+ DN S L
Sbjct: 822 IDDSFDNHSTQRL 834
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI-------GDVARSLRLF 383
MI L R ++ AL L + +P + Y++ +R+ I G +++ +F
Sbjct: 203 MIRILGRESKYSIALKLLDK-----IPIDK--YSLDVRACTTILHAYSRNGKYKQAIAMF 255
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNK-IEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
++M+ +SP + T+N ++ + +M + +K M GL+ D F+ S +I A +
Sbjct: 256 ERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGR 315
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
G +EAK+ F+ ++ +G P + T N +L+ + G + EA +I+K ++ + S
Sbjct: 316 EGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDS 373
>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Brachypodium distachyon]
Length = 841
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 134/532 (25%), Positives = 233/532 (43%), Gaps = 44/532 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P YN +I A+ +M C+P TYNIL++ +C G + +A
Sbjct: 241 VIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDAR 300
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
RL +M +G N T+ +L+DG+ A R+ E + MK R + P+ T L G
Sbjct: 301 RLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGA 360
Query: 126 FRCLDP----HKAFELLIRFMEREPL------------------TQKLVC---------- 153
++ H EL F R KLVC
Sbjct: 361 YKFGKAVQLAHGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVS 420
Query: 154 ----NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
N L+ S +A + M G +P S TF+Y + L L++ +L+
Sbjct: 421 VAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLE 480
Query: 210 TFIKRG--VKPRFSTYLLLMEALYKAGRDVEGD-RYLNHVFKDRLVSNVNSYNMVIDCFC 266
I +G V F+ Y M++ +++G +VEG + + + K + + +++ I C
Sbjct: 481 HMICKGYCVGTSFTIY---MDSYFRSG-NVEGALKCWDDMVKVGVQPDFIAFSAYISGLC 536
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
+++ ++ A + EM R PN +T+N+LIS C+ V + +L + + G PD F
Sbjct: 537 RLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVF 596
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T N +ID C+ R + +M G+ P+ +TYN +I + C D++ ++ KM
Sbjct: 597 TSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKM 656
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
AD PDI+T+N + S C + + +A K ++ +G P++ +Y+ L+ I S
Sbjct: 657 LADGCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDG-ICSDVL 715
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
D A + + P++ T N+ +QG + A + KE ++F
Sbjct: 716 DRAMILTGKLIKMAFQPNTVTVNVFFSHFCKQGFGKRALVWAEKLKEDSVAF 767
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/510 (24%), Positives = 219/510 (42%), Gaps = 43/510 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +PS A++ L ++ + A+ F +M+ +P +N +I G C G+V
Sbjct: 170 GNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIFNAMILGFCHRGLVHIG 229
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+ M P+ +Y ILI G+ + + F++L+ M+E P T LV+
Sbjct: 230 LGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNV 289
Query: 125 VFR---CLDPHKAFELLIRF-MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ +D + F+ +++ +E +T N L+ + EA A R+M RG
Sbjct: 290 LCHDGNMVDARRLFDEMVKVGIEANTIT----FNVLVDGYAKAGRMDEAYAACREMKARG 345
Query: 181 YLPESSTFD-YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
+P+ TF+ + G + G + G + + +++ L GR +
Sbjct: 346 LVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDA 405
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + + + +V +N ++ + K ++A E+ M + P+ TFN LI G
Sbjct: 406 WKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMG 465
Query: 300 HCKDAEVHKTRELLVML---------------------------LEC-------GFKPDK 325
C + + LL + L+C G +PD
Sbjct: 466 LCNQGRLDDAQLLLEHMICKGYCVGTSFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDF 525
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
F++ I LCR +A EM G PN ITYN LI + C +G V+ +L+L +K
Sbjct: 526 IAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKK 585
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M+ + PD++T N LI FC+ +++ K F M GL PD +Y+ +I A +
Sbjct: 586 MRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQD 645
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
A M +GC PD +T N+ + +L
Sbjct: 646 MSSAMIFMNKMLADGCEPDIFTYNIWMHSL 675
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 178/414 (42%), Gaps = 39/414 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ S +NA++ A K + A + M+ P T+N LI G+C G +D+A
Sbjct: 416 GVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDA 475
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ M GY ++TI +D + + V + + M + V P+ + + G
Sbjct: 476 QLLLEHMICKGYCVGT-SFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISG 534
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R ++A++ + R + + N+L+ SEA + +KM G +P+
Sbjct: 535 LCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPD 594
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-DVEGDRYL 243
T + +L++ K GR D+ R+L
Sbjct: 595 VFTSN-----------------------------------ILIDGFCKEGRLDMMNKRFL 619
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ ++ L +V +YN +I+ +C M A +M P++ T+N + C +
Sbjct: 620 D-MYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMHSLCNN 678
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+++ ++L L+ G P+ T+N+++D +C + + A+ ++++ PNT+T
Sbjct: 679 HLLNRAVKMLDELVAMGCMPNSVTYNTLMDGIC-SDVLDRAMILTGKLIKMAFQPNTVTV 737
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
N+ C G R+L +K++ D ++ D T N L ++ M +A A
Sbjct: 738 NVFFSHFCKQGFGKRALVWAEKLKEDSVAFDDATMNILDWAYKEMEDDSQASNA 791
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 143/325 (44%), Gaps = 5/325 (1%)
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
MASEA +L + G P S + L ++ + RG +P + +
Sbjct: 154 GMASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIF 213
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
++ G G L +++ ++ + SYN++I + A ++ EMR+
Sbjct: 214 NAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRE 273
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
P +VT+N L++ C D + R L +++ G + + TFN ++D +A R ++
Sbjct: 274 SGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDE 333
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIG---DVARSLRLFQKMQADRISPDIYTFNA 400
A EM G+ P+ T+NIL G +A + +M RIS D + +
Sbjct: 334 AYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRISAD--SVDM 391
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
++ C +++ A K S + G+ ++AL+ A K G ++A + + M + G
Sbjct: 392 VVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIG 451
Query: 461 CNPDSYTSNLILETLVQQGRFEEAH 485
P S T N ++ L QGR ++A
Sbjct: 452 LVPSSPTFNYLIMGLCNQGRLDDAQ 476
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 129/286 (45%), Gaps = 14/286 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P ++A I L + + ++ AY F +M+ P+ TYN LI CR+G V E
Sbjct: 519 VGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSE 578
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL+L K+M G P+V+T ILIDGFC R+ + + M + P+ T ++++
Sbjct: 579 ALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIIN 638
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
D A + + + N ++ L NN + + A +L ++ G +P
Sbjct: 639 AYCGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMP 698
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
S T++ + + + + L+ + IK +P T + K G G R L
Sbjct: 699 NSVTYNTLMDGICSDV-LDRAMILTGKLIKMAFQPNTVTVNVFFSHFCKQGF---GKRAL 754
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
V+ ++L + +++ +N++D A +EM D A N
Sbjct: 755 --VWAEKLKEDSVAFDDA-----TMNILDWAY---KEMEDDSQASN 790
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%)
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
+ + F M A + +R P+L L+ + EV ++ V +
Sbjct: 145 LALHAFLAAGMASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTAR 204
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G +P FN+MI C L L M + V P+ +YNILI+ G +
Sbjct: 205 GPRPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDA 264
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+L +M+ P + T+N L+ C + A + F M+ +G+ + +++ L+
Sbjct: 265 FQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDG 324
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
K+GR DEA M+ G PD T N++ + G+
Sbjct: 325 YAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGK 365
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 3/189 (1%)
Query: 311 ELLVML--LECGFK-PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
E LV+L + CG P +++ L RA A EM G P+ +N +I
Sbjct: 158 EALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIFNAMI 217
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
C G V L L M + PD ++N LI+ + + A + M G +
Sbjct: 218 LGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQ 277
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P +Y+ L+ L G +A++ F M + G ++ T N++++ + GR +EA+
Sbjct: 278 PTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAYAA 337
Query: 488 VKTSKERGI 496
+ K RG+
Sbjct: 338 CREMKARGL 346
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/531 (22%), Positives = 229/531 (43%), Gaps = 35/531 (6%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F G++PS N V+ +LVK +D+ + F+ M PD T+NIL++ +C G
Sbjct: 131 MGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGK 190
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
A L+++ME G P TY L++ +C R ++++ M + + + T
Sbjct: 191 FKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNV 250
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + R K + LL R ++ NTL+ A + +M
Sbjct: 251 FIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFN 310
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
LP S T++ + T ++ E ++D + G++P TY L+ LYK
Sbjct: 311 LLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVS 370
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L + + + SY +ID CK M++ A ++ +M + P++VTF+ LI+G
Sbjct: 371 SILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGF 430
Query: 301 CKDAEVHKTRELLVMLLECGFKP-----------------------------------DK 325
+ +++ +E++ + + G P D
Sbjct: 431 FRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADH 490
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
FT N ++ CR + E+A ++ M G+ PN++T++ +I GD ++ +F K
Sbjct: 491 FTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDK 550
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M + P ++T+ L++ C I +A K F + + DN ++ + + +SG
Sbjct: 551 MNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGN 610
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+A M N PD++T ++ L ++G+ A + + E+G+
Sbjct: 611 LSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGL 661
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 199/456 (43%), Gaps = 35/456 (7%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
C + +++LI R +V +A++ M G P+VYT +++ ++V +
Sbjct: 101 CNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFW 160
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
+ M + +CP+ AT N LL L
Sbjct: 161 SFFKGMLAKGICPDVATF-----------------------------------NILLNAL 185
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
A +LRKM + G P + T++ + ++D +G+
Sbjct: 186 CERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDV 245
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY + ++ L + R +G L + ++ + N +YN +I F + ++ AT++ E
Sbjct: 246 CTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDE 305
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M ++ PN +T+NTLI+GHC + + L+ +++ G +P++ T+ ++++ L +
Sbjct: 306 MSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAE 365
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
F L M GV + I+Y +I LC G + +++L M ++PD+ TF+
Sbjct: 366 FGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSV 425
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI F R+ KI A++ M GL P+ YS LI K G EA + M +G
Sbjct: 426 LINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSG 485
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
D +T N+++ T + G+ EEA + G+
Sbjct: 486 HVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGL 521
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/493 (21%), Positives = 218/493 (44%), Gaps = 3/493 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G PS Y ++ L I+ A F ++ D +N + CR G + +
Sbjct: 554 FGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSD 613
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCN-AKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A+ L+ +M + P+ +TYT LI G C K VA + + +++ + PN A SLV
Sbjct: 614 AIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLV 673
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + A + + ++ + N ++ + S S+ IL M +
Sbjct: 674 DGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLC 733
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP-RFSTYLLLMEALYKAGRDVEGDR 241
+T++ + + + I+ G P +FS + L++ DV +
Sbjct: 734 FNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDV-AIK 792
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + + V + ++NM+I FC+ N M +A E+ ++M + PN+ T+N L +G
Sbjct: 793 ILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLI 852
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ ++ HK +L +LLE G P + ++I+ +CR + A+ EM G+ + +
Sbjct: 853 RTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNV 912
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
+ ++R L + ++ + M +I P + TF L+ +C+ + KA + M
Sbjct: 913 AMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIM 972
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
++ D +Y+ LI L +G + A + + M+Q P++ +++++
Sbjct: 973 EHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQ 1032
Query: 482 EEAHDIVKTSKER 494
E+ +++ ++R
Sbjct: 1033 IESEKLLRDIQDR 1045
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/530 (21%), Positives = 207/530 (39%), Gaps = 42/530 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y A+++ L K+ + ++M + + +Y +I G+C+ G+++EA
Sbjct: 345 GLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEA 404
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+ M + P+V T+++LI+GF ++ ++ M + + PN +L++
Sbjct: 405 VQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYN 464
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A + CN L+ EA + M G P
Sbjct: 465 YCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPN 524
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S TFD + D + + D G P TY L++ L G E ++ +
Sbjct: 525 SVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFH 584
Query: 245 HVFKDRLVSNVNS---YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ R + N +N + C+ + A + EM D P+ T+ LI+G C
Sbjct: 585 RL---RCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLC 641
Query: 302 KDAEV----------------------------------HKTRELLVM--LLECGFKPDK 325
K ++ H L + +L +PD
Sbjct: 642 KKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDT 701
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
FN +ID R + D LS M + N TYNIL+ +AR L++
Sbjct: 702 VAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKD 761
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M PD +++++LI +C+ + A K + G D F+++ LI +
Sbjct: 762 MIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNE 821
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+A + M Q P+ T N + L++ F +AH +++ E G
Sbjct: 822 MKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESG 871
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 210/495 (42%), Gaps = 38/495 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ LY+ +I K + A + M+ D FT N+L+ CR G ++EA
Sbjct: 450 GLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEA 509
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M +G PN T+ +I+G+ N+ + F V + M P+ T L+ G
Sbjct: 510 EYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKG 569
Query: 125 VFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ C+ H +A + R ++ NT L + S+A A++ +M +L
Sbjct: 570 L--CIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFL 627
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ ++T T L+ GL K+G ++ AL +G+ +E
Sbjct: 628 PD----NFTYTNLIAGL------------CKKGK---------IVAALLLSGKAIE---- 658
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
K L N Y ++D K A I EM ++D+ P+ V FN +I + +
Sbjct: 659 -----KGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSR 713
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ K ++L + + T+N ++ + H +M+ G P+ +
Sbjct: 714 KGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFS 773
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
++ LI C ++++ + + + D +TFN LI FC N+++KA + M
Sbjct: 774 WHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMN 833
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ P+ +Y+AL LI++ F +A + + ++G P + ++ + + G +
Sbjct: 834 QFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIK 893
Query: 483 EAHDIVKTSKERGIS 497
A + K GIS
Sbjct: 894 GAMKLQDEMKTLGIS 908
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 162/363 (44%), Gaps = 12/363 (3%)
Query: 141 FMEREPLTQKLVCNT------LLYRLS-NNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
ME P +CN+ LL R+ N M +A MG RG P T + +
Sbjct: 94 LMETYP-----ICNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLG 148
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
LV ++ + +G+ P +T+ +L+ AL + G+ L + + +
Sbjct: 149 SLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYP 208
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+YN +++ +CK A+++ M + I ++ T+N I C+D+ K LL
Sbjct: 209 TAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLL 268
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ P++ T+N++I R + E A EM + + PN+ITYN LI C
Sbjct: 269 KRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTT 328
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G++ +LRL M + + P+ T+ AL+ + + M G+R + SY
Sbjct: 329 GNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISY 388
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+A+I L K+G +EA Q M + NPD T ++++ + G+ A +I+ +
Sbjct: 389 TAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYK 448
Query: 494 RGI 496
G+
Sbjct: 449 TGL 451
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 2/283 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P ++++I +S S D+A + ++++ DRFT+N+LI C + +A
Sbjct: 766 GFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKA 825
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LVKQM PNV TY L +G + RVL+++ E P +L++G
Sbjct: 826 FELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLING 885
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R + A +L + + + ++ L+N+ A +L M + +P
Sbjct: 886 MCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPT 945
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+TF + ++ + + VK Y +L+ L G D+E L
Sbjct: 946 VATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANG-DIEAAFKLY 1004
Query: 245 HVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
K R L N + Y ++ID FC N + ++ R+++DR++
Sbjct: 1005 EEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDREL 1047
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 230/491 (46%), Gaps = 9/491 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG PS R N ++ +LV+ A L + ++ PD FT +I+++ C+ G V+
Sbjct: 177 LGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNV 236
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ VK+M+ LG+ NV TY LIDG + + VL++M ER + N+ T+ L+
Sbjct: 237 AVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIK 296
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA-----SEAAAILRKMGD 178
G R +A E ++R MER ++ +V + Y + + +A + +M +
Sbjct: 297 GYCRQCKLEEA-EKVLREMER---SEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLN 352
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G + + ++E +L + ++P +Y LM+ + G +
Sbjct: 353 VGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTK 412
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
N + + + SNV ++N ++ C+V + A + M R + P+ V++ TL+
Sbjct: 413 AISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLD 472
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
K E + L +L G+ + FN+MI+ C+ + +A + + M E G P
Sbjct: 473 LLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEP 532
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ +TY LI C +G+V + ++ +KM+ + I P I +N+LI + K +
Sbjct: 533 DGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLL 592
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M GL P+ +Y LI GR D+A + M + G P+ + I+ +L +
Sbjct: 593 SEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRL 652
Query: 479 GRFEEAHDIVK 489
GR +EA+ +++
Sbjct: 653 GRIDEANMLLQ 663
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 212/466 (45%), Gaps = 22/466 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI + +N+++ L + + + A + M PD +Y L+ + ++G
Sbjct: 423 VGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFR 482
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L + GY + Y + +I+GFC +++ E MKE P+ T R+L+
Sbjct: 483 ALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLID 542
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKL-VCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G + + +AF++ + ME+E + + + N+L+ L + E +L +M +G
Sbjct: 543 GYCKLGNVEEAFKVKEK-MEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLS 601
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG--- 239
P T+ + L++ I++G P ++ +LY+ GR E
Sbjct: 602 PNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANML 661
Query: 240 -------DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVT 292
D +L+H + DRL + N+ D + +D +++ PN V
Sbjct: 662 LQKMVNLDVFLDHGYFDRL-HKADDGNL--DSQKIADTLDESSKSFS-------LPNSVV 711
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+N I+G CK +V +++ LL GF PD FT+ ++I A DA EM+
Sbjct: 712 YNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEML 771
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
+ G+ PN ITYN LI LC G++ R+ +LF K+ ++P++ ++N LI +C+
Sbjct: 772 KRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTR 831
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+A ML G+ P +YSALI K G +A M +
Sbjct: 832 EALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRE 877
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/501 (24%), Positives = 221/501 (44%), Gaps = 14/501 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ + + NA+I+ K+ + A +M +P+ ++Y+ L+ G CR G+V +
Sbjct: 353 VGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTK 412
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ + +M +G NV T+ L+ G C + V +M +R V P+E + +L+
Sbjct: 413 AISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLD 472
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+F+ + +A L + R NT++ EA +M + G+ P
Sbjct: 473 LLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEP 532
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ + ++ E + + K + P Y L+ L+K+ + E L
Sbjct: 533 DGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLL 592
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + L NV +Y +I +C +D+A +M ++ APN++ + ++S +
Sbjct: 593 SEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRL 652
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA-------LDCLSEMVEWGV 356
+ + MLL+ D F + D R H+ +D D L E +
Sbjct: 653 GRIDEAN----MLLQKMVNLDVFLDHGYFD---RLHKADDGNLDSQKIADTLDESSKSFS 705
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
PN++ YNI I LC G V + ++F + SPD +T+ LI + + A
Sbjct: 706 LPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFS 765
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
ML GL P+ +Y+ALI L KSG D A++ F + G P+ + N++++
Sbjct: 766 LRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYC 825
Query: 477 QQGRFEEAHDIVKTSKERGIS 497
+ G EA D+ + GIS
Sbjct: 826 KNGNTREALDLRNKMLKEGIS 846
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/568 (22%), Positives = 235/568 (41%), Gaps = 71/568 (12%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ +LG + YN++ID V ++ A + + M ++ T +LI G CR
Sbjct: 244 MDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCK 303
Query: 61 VDEALRLVKQME-GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
++EA +++++ME G + Y Y +LIDG+C ++ + R+ + M + N
Sbjct: 304 LEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICN 363
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+L++G + +A LL+R ++ + + +TL+ + ++A ++ +M
Sbjct: 364 ALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRV 423
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G T + + L + + +KRGV P +Y L++ L+K G
Sbjct: 424 GIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRA 483
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
N + + ++N +I+ FCK+ M A E M++ P+ VT+ TLI G
Sbjct: 484 LALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDG 543
Query: 300 HCKDAEVH--------------------------------KTRELLVMLLEC---GFKPD 324
+CK V KTRE++ +L E G P+
Sbjct: 544 YCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPN 603
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
T+ ++I C R + A +M+E G PN I + ++ SL +G + + L Q
Sbjct: 604 VVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQ 663
Query: 385 KM----------QADRIS-------------------------PDIYTFNALIQSFCRMN 409
KM DR+ P+ +N I C+
Sbjct: 664 KMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSG 723
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
K++ A+K F S+L G PDNF+Y LI +G ++A M + G P+ T N
Sbjct: 724 KVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYN 783
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGIS 497
++ L + G + A + +G++
Sbjct: 784 ALINGLCKSGNLDRAQKLFDKLHLKGLA 811
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 189/412 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G ST +N +I+ K + A F +M +PD TY LI G C++G V+EA
Sbjct: 494 GYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEA 553
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ ++ME P++ Y LI G +K+ EV +L M + + PN T +L+ G
Sbjct: 554 FKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAG 613
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
KAF +E+ ++C+ ++ L EA +L+KM + +
Sbjct: 614 WCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLD 673
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
FD LD + LD K P Y + + L K+G+ + + +
Sbjct: 674 HGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFS 733
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +Y +I + ++ A + EM R +APN++T+N LI+G CK
Sbjct: 734 SLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSG 793
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + ++L L G P+ ++N +ID C+ +ALD ++M++ G+ P+ ITY+
Sbjct: 794 NLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYS 853
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
LI C GD+ ++ L +M+ +I F L++ + +++K K
Sbjct: 854 ALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAK 905
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 210/490 (42%), Gaps = 36/490 (7%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
S +++ ++ + I A F M C P + N L+ + R G A+ +
Sbjct: 147 SPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVY 206
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
+ LG P+V+T +I+++ +C V ++ M N T SL+ G
Sbjct: 207 DHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSI 266
Query: 129 LDPHKAFELLIRFM-EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D +A E++++ M ER L K+ L+ EA +LR+M E S
Sbjct: 267 GDMERA-EMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREM-------ERSE 318
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
G+ L+E Y +L++ + + + R + +
Sbjct: 319 ----------GMVLDEY-----------------AYGVLIDGYCRVCKMDDAVRLRDEML 351
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
L N+ N +I+ +CK + A + M D D+ P +++TL+ G C++ V
Sbjct: 352 NVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVT 411
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
K + +L G + + T NS++ LCR FEDAL M++ GV P+ ++Y L+
Sbjct: 412 KAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLL 471
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
L +G+ R+L L+ + A Y FN +I FC+M K+ +AE+ F M LG
Sbjct: 472 DLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFE 531
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD +Y LI K G +EA + ME+ P N ++ L + + E D+
Sbjct: 532 PDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDL 591
Query: 488 VKTSKERGIS 497
+ +G+S
Sbjct: 592 LSEMCLKGLS 601
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 104/236 (44%), Gaps = 16/236 (6%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NVNS+ ++ + M D E+ + P+ +++L+ + EL+
Sbjct: 93 NVNSHCKLVHILSRARMYDETRSYLNEL----VTPSKNNYSSLVVWN----------ELV 138
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ + F P F+ ++ C ++AL M + G P+ + N L+ SL
Sbjct: 139 RVFEDFKFSPT--VFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRK 196
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G+ + ++ ++ + I PD++T + ++ ++C+ + A M LG + +Y
Sbjct: 197 GESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTY 256
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
++LI + G + A+ M + G + T L+++ +Q + EEA +++
Sbjct: 257 NSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLR 312
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 82/198 (41%), Gaps = 19/198 (9%)
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE-----------WG--------VPP 358
+ F+P+ + ++ L RA +++ L+E+V W
Sbjct: 87 QSNFRPNVNSHCKLVHILSRARMYDETRSYLNELVTPSKNNYSSLVVWNELVRVFEDFKF 146
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ ++++++ C G + +L +F M P + + N L+ S R + A +
Sbjct: 147 SPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVY 206
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+ LG+ PD F+ S ++ A K G + A M+ G + T N +++ V
Sbjct: 207 DHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSI 266
Query: 479 GRFEEAHDIVKTSKERGI 496
G E A ++K ERGI
Sbjct: 267 GDMERAEMVLKLMGERGI 284
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 50/102 (49%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ YN +ID K+ + A +M + P TY+ LI+G C+ G + +A
Sbjct: 809 GLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKA 868
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
L+ +M L N+ + L++G V ++ ++ +M
Sbjct: 869 TNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910
>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
Length = 800
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 138/600 (23%), Positives = 267/600 (44%), Gaps = 115/600 (19%)
Query: 5 GISPSTRLYNAVIDALVKSN-SIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P+T +YNAV+ LV S ++ LA + +M C P+R TYN+LIHG+C+ G +
Sbjct: 170 GCRPTTFVYNAVLRVLVASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVD 229
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS--- 120
AL+L +M G PNV T+TIL+ CNA ++ E +L M+++ P+E T +
Sbjct: 230 ALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLS 289
Query: 121 ---------------------------------LVHGVFRCLDPHKAFELLIRFMEREPL 147
L+ G+F + F+ + +E+ +
Sbjct: 290 GLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADV 349
Query: 148 TQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLPESSTFD----------------- 189
+ +V T++ R + ++A A +M ++G+ P++ ++
Sbjct: 350 SPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARS 409
Query: 190 --------------YTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALY 231
+T T ++ GL ++E + D ++ G P TY +L++ LY
Sbjct: 410 LMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLY 469
Query: 232 KAGRDVEG-------------DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
+A R E +L V + + +++ C+ + +A ++
Sbjct: 470 RAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLL 529
Query: 279 REMRDRDIAPNLVTFNTLISGHCK----DAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
R + D + P++VT+NTL++G CK D + REL V GF D+ T+ ++ID
Sbjct: 530 RGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVK----GFPLDEITYGTLIDS 585
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL--------FQKM 386
L RAHR+ DAL +++ G P+ YN ++RSLC + +++++ L + +
Sbjct: 586 LLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLWFDHLPRKYNLL 645
Query: 387 QADRISPDIYTFNALIQSFCRMNKIE---KAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
D + I + + C + K ++ + S+ ++ Y+ + LI++
Sbjct: 646 AQDEV---ISSARKKFEEGCLHEAVRELIKIDQEYGSV-------NSCPYTIWLIGLIQA 695
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFPG 503
GR ++A + F +E++G + + + L +G A D++ + ++G + + + G
Sbjct: 696 GRIEDALKIFHILEESGIDITPACCVHLSKYLCLEGNLGAAVDVMLYTLKKGFTMRRYVG 755
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 120/505 (23%), Positives = 216/505 (42%), Gaps = 33/505 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD-QCKPDRFTYNILIHG-ICRIGVVD 62
G+ P T + A+I A + A F +M + C+P F YN ++ + G V
Sbjct: 134 GLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVP 193
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
AL L +M G PN TY +LI G C + ++ + M R + PN T L+
Sbjct: 194 LALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILL 253
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ +A LL ++ ++ N L L EA L + G
Sbjct: 254 SSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTG-- 311
Query: 183 PESSTFDYTV---TCLVTGLDLNE------TCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
TF + +CL+ GL L C ++ + V P Y +++ +A
Sbjct: 312 ----TFVLGLKGYSCLIDGLFLAGRYEEGFQC-YMEVLEQADVSPDIVLYTIMIRGCAEA 366
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
GR + + + + + + YN ++ C +D A + EM ++ ++ T+
Sbjct: 367 GRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTY 426
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
T+I G CK+ V + ++ ++E G P T+N +ID L RAHR E+A +M E
Sbjct: 427 TTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKM-E 485
Query: 354 WGVPP--------------NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
G P ++ T L+ S+C G V ++ +L + + + PD+ T+N
Sbjct: 486 VGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYN 545
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
L+ C++ ++ A + F + G D +Y LI +L+++ R+++A F + +
Sbjct: 546 TLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHS 605
Query: 460 GCNPDSYTSNLILETLVQQGRFEEA 484
G P N ++ +L + + +A
Sbjct: 606 GGTPSMPIYNSMMRSLCRMQKLSQA 630
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 2/178 (1%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV-EWGVPPNTITYNILIRSLCAIGD-VA 377
G +P F ++I A R +A++ S M E+G P T YN ++R L A G V
Sbjct: 134 GLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVP 193
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+L L+ +M A P+ T+N LI C+ A K F M++ G+ P+ +++ L+
Sbjct: 194 LALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILL 253
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
++ +G+ EA+ SME GC PD T N L L + GR +EA + ++ + G
Sbjct: 254 SSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTG 311
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 156/389 (40%), Gaps = 49/389 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P T YN ++ AL + +D A +M + D TY +I G+C+ +VDEA
Sbjct: 383 GFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEA 442
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE---VFRVLEIMKE----------RNV 111
+++ M +G P+V TY +LIDG A R+ E +F +E+ N
Sbjct: 443 MQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQ 502
Query: 112 CPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAA 171
+ T++ LV + + KA++LL ++ + + NTLL L A
Sbjct: 503 VRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALR 562
Query: 172 ILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY 231
+ R++ +G+ + T+ + L+ N+ + + G P Y +M +L
Sbjct: 563 LFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLC 622
Query: 232 KAGRDVEG--------DRYLNHVFKDRLVSN--------------------------VNS 257
+ + + R N + +D ++S+ VNS
Sbjct: 623 RMQKLSQAINLWFDHLPRKYNLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYGSVNS 682
Query: 258 --YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
Y + + + ++ A +I + + I L C + + ++++
Sbjct: 683 CPYTIWLIGLIQAGRIEDALKIFHILEESGIDITPACCVHLSKYLCLEGNLGAAVDVMLY 742
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
L+ GF ++ N ++ LC HR +DA
Sbjct: 743 TLKKGFTMRRYVGNRLLCSLCIHHRRKDA 771
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 15/138 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRF--------------TYN 49
+G PS YN +ID L +++ ++ A + F +M V P F T
Sbjct: 452 VGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGN-NPSLFLRLTLGANQVRDSETLQ 510
Query: 50 ILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER 109
L+ +C+ G V +A +L++ + G P+V TY L++G C + + R+ ++ +
Sbjct: 511 KLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVK 570
Query: 110 NVCPNEATVRSLVHGVFR 127
+E T +L+ + R
Sbjct: 571 GFPLDEITYGTLIDSLLR 588
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML-TLGLRPDNFSYSALIKALIKSG- 444
QA + P F ALI + + +A +AF M G RP F Y+A+++ L+ SG
Sbjct: 131 QAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGG 190
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
A + M GC P+ T N+++ L ++G +A + RGI+
Sbjct: 191 AVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGIT 243
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/468 (25%), Positives = 206/468 (44%), Gaps = 36/468 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PST +N VI L+ A F++M+ D PD FTYNILIH +C+ + EA
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMA-DSGIPDAFTYNILIHWLCQRRKIREA 405
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L ++M G P + TY L+ +C + E ++ M + PN T +L+ G
Sbjct: 406 LNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKG 465
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
KA+ LL + NTL+ L E +L++ G++P
Sbjct: 466 HINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPT 525
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + + + + +G+ P
Sbjct: 526 AMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPP-------------------------- 559
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
N+ +Y ID +CK + D A ++ ++R + + P++ +N+LI G C++
Sbjct: 560 ---------NIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEG 610
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ ++LV++L+ G P+ +NS I E+AL +M++ G+ +T TY
Sbjct: 611 NMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYT 670
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI G+V +L+L+ +M A PD TF AL CR I+ A K M L
Sbjct: 671 TLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRL 730
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
+RP+ Y+ LI +++G+ EA + M + PD T ++++
Sbjct: 731 DIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/490 (23%), Positives = 219/490 (44%), Gaps = 3/490 (0%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
+++ V+ A K D A F +M + +PD+ ++ I +C++ + AL ++++M
Sbjct: 179 MFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKM 238
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
+ G+ P +T+ ++D R+ E + + + + +L+HG +
Sbjct: 239 QDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREV 298
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
KA ++ + R+ L V T+L R + M +A + R+M D G LP ++ F+
Sbjct: 299 RKALDIFEETL-RDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNM 357
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L+ + + G+ F TY +L+ L + + E + +
Sbjct: 358 VIKGLLNDKLWKDAVSLFKEMADSGIPDAF-TYNILIHWLCQRRKIREALNLWEKMNETG 416
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+ + +Y+ ++ C+C MD A ++ EM + PN+VT+ TL+ GH A K
Sbjct: 417 VKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAY 476
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
LL + + G + +T+N++I+ LC R + + L G P +TYN +I
Sbjct: 477 ALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGF 536
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
G + + ++Q+M A I P+I T+ + I +C+ + + A K + GLRPD
Sbjct: 537 IKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDI 596
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+Y++LI + G A Q + M ++G P+ N + EEA +
Sbjct: 597 AAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEK 656
Query: 491 SKERGISFKS 500
+ GI +
Sbjct: 657 MIKEGIDLDT 666
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 208/474 (43%), Gaps = 1/474 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P R+ + I +L K + A L ++M P FT+N ++ + + G ++EAL
Sbjct: 208 IEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEAL 267
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ ++ G +V T L+ G+C + V + + E + P + T L+ G
Sbjct: 268 HIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGC 327
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
P KA+EL + + L N ++ L N+ + +A ++ ++M D G +P++
Sbjct: 328 TEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG-IPDA 386
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + L + E + + + GVKP TY L+ G E +
Sbjct: 387 FTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTE 446
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ NV +Y ++ D+A + EM+ ++ N T+NTLI+G C
Sbjct: 447 MPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGR 506
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V + E+L GF P T+NS+I+ +A A +M G+PPN +TY
Sbjct: 507 VCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTS 566
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
I C +L++ ++ + PDI +N+LI FC+ + A + ML G
Sbjct: 567 FIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDG 626
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
L P+ Y++ I +EA + + M + G + D+ T +++ + G
Sbjct: 627 LLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDG 680
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 205/464 (44%), Gaps = 1/464 (0%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F++ D P TY +LI G G+ ++A L +QM G P+ + ++I G N
Sbjct: 305 FEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLN 364
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
K + + + M + + P+ T L+H + + +A L + E +
Sbjct: 365 DKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVT 423
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
++LL N EA + +M +G+ P T+ + + ++ +L
Sbjct: 424 YHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMK 483
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+ GV TY L+ L GR E L + V +YN +I+ F K MM
Sbjct: 484 QNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMG 543
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + ++M + I PN+VT+ + I G+CK + ++L + G +PD +NS+I
Sbjct: 544 SAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLI 603
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
C+ AL L M++ G+ PN YN I + + +LR ++KM + I
Sbjct: 604 YGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGID 663
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
D T+ LI F + + A K + M+ G PD+ +++AL L ++G D+A++
Sbjct: 664 LDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKL 723
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M + P+ N+++ ++ G+ +EA + ER I
Sbjct: 724 LDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKI 767
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 177/429 (41%), Gaps = 38/429 (8%)
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
+M G G+ + + + +++ + R+ + M + P++
Sbjct: 166 AEMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQR------------ 213
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
VC+ + L A+ A +LRKM D G++P TF
Sbjct: 214 -----------------------VCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTF 250
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV-EGDRYLNHVF 247
+ V LV G + E I D + G K LM Y R+V +
Sbjct: 251 NSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHG-YCLQREVRKALDIFEETL 309
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+D LV +Y ++I + M ++A E+CR+MRD + P+ FN +I G D
Sbjct: 310 RDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWK 369
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
L + + G PD FT+N +I LC+ + +AL+ +M E GV P +TY+ L+
Sbjct: 370 DAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLL 428
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
C G + +++L+ +M +P++ T+ L++ +KA M G+
Sbjct: 429 LCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVS 488
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
++++Y+ LI L GR E + E G P + T N I+ ++ G A +
Sbjct: 489 CNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAV 548
Query: 488 VKTSKERGI 496
+ +GI
Sbjct: 549 YQQMCAKGI 557
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 1/245 (0%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
++N V+D K M+ A I E+ ++V TL+ G+C EV K ++
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
L G P T+ +I E A + +M + G+ P+T +N++I+ L
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
++ LF++M AD PD +T+N LI C+ KI +A + M G++P +Y +L
Sbjct: 369 KDAVSLFKEM-ADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSL 427
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ +G DEA + + M G P+ T +++ + + F++A+ ++ K+ G+
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGV 487
Query: 497 SFKSF 501
S +
Sbjct: 488 SCNDY 492
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 90/231 (38%), Gaps = 35/231 (15%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG----- 59
GI P+ Y + ID K++ DLA + +PD YN LI+G C+ G
Sbjct: 556 GIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHA 615
Query: 60 ------------------------------VVDEALRLVKQMEGLGYAPNVYTYTILIDG 89
+++EALR ++M G + TYT LIDG
Sbjct: 616 LQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDG 675
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
F V ++ M + P+ T +L HG+ R D A +LL +
Sbjct: 676 FSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPN 735
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLD 200
L+ N L+ N EA + +M +R +P+ +T+D V G D
Sbjct: 736 VLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVGMKSLGSD 786
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 128/528 (24%), Positives = 223/528 (42%), Gaps = 38/528 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNI-LIHGICRIGVVDE 63
G P + +VI A VK ++ A L+ + V+ K L+ G C G +
Sbjct: 223 GWIPPEGTFTSVITACVKEGNVAEA-LRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRS 281
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL LV ++ G PN TY++LIDG C + + F MK + + + ++ S++
Sbjct: 282 ALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILE 341
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G +C AF + +E L NTLL L +EA + ++ +G P
Sbjct: 342 GYLKCQSWQNAFTMFNDALE-SGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISP 400
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK----------- 232
+++ + ++N C + + G P T+ +LM+ +K
Sbjct: 401 NVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIF 460
Query: 233 ------------------------AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
AGR EG N V YN +ID F K
Sbjct: 461 HRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKE 520
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
++ A+ + REM + I P+ VT+ +LI G CK + +LL + G K D +
Sbjct: 521 GNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAY 580
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
++ID C+ + A + L+E+ G+ PN YN +I + +V ++ L++KM
Sbjct: 581 GTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVN 640
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ I D+ T+ +LI + ++ A ML+ G+ PD+ +++ LI L G+F+
Sbjct: 641 EGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFEN 700
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
A++ M P N ++ ++G +EA + +RG+
Sbjct: 701 ARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGL 748
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 198/443 (44%), Gaps = 2/443 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI S N++++ +K S A+ F +++ + FT+N L+ +C+ G ++EA
Sbjct: 328 GIRSSVYSLNSILEGYLKCQSWQNAFTMFND-ALESGLANVFTFNTLLSWLCKEGKMNEA 386
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++ G +PNV +Y +I G C + +V + M + PN T L+ G
Sbjct: 387 CNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDG 446
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ D AF + R + L ++ L + E + K +G++P
Sbjct: 447 YFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPT 506
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + + ++N + + G+ P TY L++ K + LN
Sbjct: 507 CMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLN 566
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L ++ +Y +ID FCK M A E+ E+R ++PN +N++I+G
Sbjct: 567 DMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMN 626
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
V + +L ++ G D T+ S+ID L ++ R A D +EM+ G+ P+ +
Sbjct: 627 NVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHT 686
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI LC G + ++ + M + P + +N LI + +++A + ML
Sbjct: 687 VLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDR 746
Query: 425 GLRPDNFSYSALIKALIKS-GRF 446
GL PDN +Y L+ K G F
Sbjct: 747 GLVPDNITYDILVNGKFKGDGNF 769
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 207/493 (41%), Gaps = 38/493 (7%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR-------------------------- 66
++M P T+ +I + G V EALR
Sbjct: 216 LREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCM 275
Query: 67 ---------LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
LV ++ G PN TY++LIDG C + + F MK + + + +
Sbjct: 276 QGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYS 335
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
+ S++ G +C AF + +E L NTLL L +EA + ++
Sbjct: 336 LNSILEGYLKCQSWQNAFTMFNDALE-SGLANVFTFNTLLSWLCKEGKMNEACNLWDEVI 394
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
+G P +++ + ++N C + + G P T+ +LM+ +K G D+
Sbjct: 395 AKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKG-DI 453
Query: 238 EGDRYLNHVFKD-RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
E + H KD ++ + ++I CK ++ + + P + +NT+
Sbjct: 454 ENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTI 513
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
I G K+ ++ + + E G P T+ S+ID C+ + + AL L++M G+
Sbjct: 514 IDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGL 573
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
+ Y LI C D+ + L +++ +SP+ + +N++I F MN +E+A
Sbjct: 574 KMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAID 633
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
+ M+ G+ D +Y++LI L+KSGR A M G PD +++ L
Sbjct: 634 LYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLC 693
Query: 477 QQGRFEEAHDIVK 489
+G+FE A I++
Sbjct: 694 NKGQFENARKILE 706
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/492 (22%), Positives = 203/492 (41%), Gaps = 38/492 (7%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
T+LYN +D ++ +I A F Q + D+ Y+I +H +C AL L++
Sbjct: 160 TKLYNFPLD--IQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLR 217
Query: 70 QMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
+M G+ P T+T +I VAE R+ + M N A SL+ G
Sbjct: 218 EMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQG 277
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
+ A L+ E + K+ + L+ N +A +M +G SS +
Sbjct: 278 NLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGI--RSSVYS 335
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
LN IL+ ++K + + + + +AL
Sbjct: 336 -----------LNS---ILEGYLK--CQSWQNAFTMFNDALESG---------------- 363
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
++NV ++N ++ CK M+ A + E+ + I+PN+V++N +I GHC+ ++
Sbjct: 364 --LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAA 421
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
++ +L+ GF P+ TF ++D + E+A M + + P T I+I+
Sbjct: 422 CKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKG 481
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
LC G LF K + P +N +I F + I A + M +G+ P
Sbjct: 482 LCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPS 541
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y++LI K D A + M++ G D +++ ++ + AH+++
Sbjct: 542 TVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLN 601
Query: 490 TSKERGISFKSF 501
+ G+S F
Sbjct: 602 ELRGAGLSPNRF 613
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/489 (25%), Positives = 219/489 (44%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
S +L + +I K ++ + F +M + PD N ++ + +V+E +
Sbjct: 136 SVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVY 195
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
M P + T+ ++D C V VL++M+ PN+ + LV+G+
Sbjct: 196 SVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGK 255
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+ +A EL+ + N L+ M EA + R+M RG LP T+
Sbjct: 256 GEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTY 315
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ + L +++ LD + + P +Y L+ + G E + +
Sbjct: 316 NTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRS 375
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
LV +V +YN +ID C+ +D A + +M + P++VTF L+ G C+ +
Sbjct: 376 KNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPM 435
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+EL +L G KPD + + I + A EM G PP+ ITYN+LI
Sbjct: 436 AKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLIN 495
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
LC +G+ + L QKM+ + I PD T+ ++I + + KAE+ F ML G+ P
Sbjct: 496 GLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHP 555
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+Y+ LI + GR D AK+ F M+ G +P+ T N ++ L ++ + A+++
Sbjct: 556 SVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLF 615
Query: 489 KTSKERGIS 497
+ +G+S
Sbjct: 616 AEMESKGVS 624
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 219/476 (46%), Gaps = 12/476 (2%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ +N ++D+ K + A M + C P+ +YN+L++G+ G D A
Sbjct: 203 IRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAK 262
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L++QM LG + +TY LI GFC + E + M R P T ++++ +
Sbjct: 263 ELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSL 322
Query: 126 ---FRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
R D + ++++ E L LV NTL+Y S +EA + ++ +
Sbjct: 323 CRLGRVSDARRYLDVMVN----EDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNL 378
Query: 182 LPESSTFDYTV--TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
+P T++ + C LD+ + G+ D IK G+ P T+ +L+ + G
Sbjct: 379 VPSVVTYNTLIDGGCRTGNLDIAK--GMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMA 436
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + L + +Y I K+ +A + EM+ P+L+T+N LI+G
Sbjct: 437 KELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLING 496
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK EL+ + G PD T+ S+I + A + S+M++ G+ P+
Sbjct: 497 LCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPS 556
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+TY +LI S G + + + F +MQ +SP++ T+NALI C+ N ++ A F
Sbjct: 557 VVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFA 616
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
M + G+ P+ ++Y+ LI + +A + + M PDS T + +++ L
Sbjct: 617 EMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHL 672
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 198/438 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN +++ L D A +QMS+ K TYN LI G C+ + +EA
Sbjct: 237 GCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEA 296
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++M G G P V TY ++ C RV++ R L++M ++ P+ + +L++G
Sbjct: 297 NDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYG 356
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + +A L + + + NTL+ A + M G P+
Sbjct: 357 YSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPD 416
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF V +L + D + RG+KP Y + K G +
Sbjct: 417 VVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKE 476
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + ++ +YN++I+ CK+ D A E+ ++MR I P+ VT+ ++I H
Sbjct: 477 EMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISG 536
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ K E+ +L+ G P T+ +I R + A EM + GV PN ITYN
Sbjct: 537 LLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYN 596
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI LC + + LF +M++ +SP+ YT+ LI + + A K + ML
Sbjct: 597 ALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDR 656
Query: 425 GLRPDNFSYSALIKALIK 442
++PD+ ++SAL+K L K
Sbjct: 657 EIKPDSCTHSALMKHLSK 674
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 170/378 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN ++ +L + + A M + PD +YN LI+G R+G EA
Sbjct: 307 GALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEA 366
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L ++ P+V TY LIDG C + + + M + +CP+ T LV G
Sbjct: 367 LLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRG 426
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A EL + R + T + S+A + +M G+ P+
Sbjct: 427 FCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPD 486
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L + ++ ++ G+ P TY ++ A +G + + +
Sbjct: 487 LITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFS 546
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K + +V +Y ++I + +D A + EM+D+ ++PN++T+N LI G CK+
Sbjct: 547 DMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKEN 606
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ L + G P+K+T+ +I+ ++DAL +M++ + P++ T++
Sbjct: 607 MMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHS 666
Query: 365 ILIRSLCAIGDVARSLRL 382
L++ L + LRL
Sbjct: 667 ALMKHLSKDYKLLAVLRL 684
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 214/459 (46%), Gaps = 3/459 (0%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
PD LI C+IG A R++ +E G + +Y +LI+ +C + + E RV
Sbjct: 102 PDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALRV 161
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
L+ +V PN AT +++ + +A ++L R ++ + + C L+
Sbjct: 162 LD---HTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCK 218
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
S +A + +M +G P+ T++ + L+E L G + +
Sbjct: 219 ESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVIS 278
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
+ +++ +L GR ++ + L + + +V ++N++I+ C+ ++ +A + M
Sbjct: 279 HNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMP 338
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
PN +FN LI G C + + E L +++ G PD T+N ++ LC+ + +
Sbjct: 339 KHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVD 398
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
DA+ LS++ G P+ I+YN +I L +G ++ L ++M + PD+ T +++
Sbjct: 399 DAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVV 458
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
R K+ +A K F + G++P+ F Y++++ L K+ + A + M NGC
Sbjct: 459 GGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCK 518
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
P + +++ + +G EEA + RG+ KS
Sbjct: 519 PTEASYTTLIKGITYEGLAEEASKLSNELYSRGLVKKSL 557
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 175/369 (47%), Gaps = 8/369 (2%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P+ Y+AV+ +L + A + +C PD T +LI C+ V +A+
Sbjct: 167 VAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAM 226
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK----ERNVCPNEATVRSL 121
+L +M G G P+V TY +LI GFC R+ E L+ + + +V + +RSL
Sbjct: 227 KLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSL 286
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
G R +D A +LL + + + N L+ L + +A +L M G+
Sbjct: 287 CSG-GRWMD---AMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGH 342
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P S +F+ + ++ L+ + RG P TY +L+ AL K G+ +
Sbjct: 343 TPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVV 402
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L+ + ++ SYN VID KV + A E+ EM + + P+L+T +++ G
Sbjct: 403 ILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLS 462
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
++ +VH+ + L G KP+ F +NS++ LC+A + A+D L +MV G P
Sbjct: 463 REGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEA 522
Query: 362 TYNILIRSL 370
+Y LI+ +
Sbjct: 523 SYTTLIKGI 531
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 180/361 (49%), Gaps = 7/361 (1%)
Query: 140 RFME----REPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCL 195
RF+E + + + C L+ A I+ + + G + ++++++ +
Sbjct: 90 RFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAY 149
Query: 196 VTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNV 255
++ E +LD V P +TY ++ +L G+ + + L+ + + +V
Sbjct: 150 CKSGEIEEALRVLD---HTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDV 206
Query: 256 NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
+ ++ID CK + + +A ++ EMR + P++VT+N LI G CK+ + + L
Sbjct: 207 VTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKK 266
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
L G + D + N ++ LC R+ DA+ L+ M+ G P+ +T+NILI LC G
Sbjct: 267 LPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGL 326
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+ ++L + + M +P+ +FN LIQ FC I++A + M++ G PD +Y+
Sbjct: 327 LGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNI 386
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
L+ AL K G+ D+A + GC+P + N +++ L++ G+ E A ++++ +G
Sbjct: 387 LLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKG 446
Query: 496 I 496
+
Sbjct: 447 L 447
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 185/453 (40%), Gaps = 41/453 (9%)
Query: 52 IHGICRI---GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
IH +CR+ G ++E R ++ M G P+V T LI FC R R++ I++E
Sbjct: 73 IHHLCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEE 132
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE 168
+ + L++ + + E
Sbjct: 133 SGAVIDANSYNVLINAYCK--------------------------------------SGE 154
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
LR + P ++T+D + L L + +LD ++ P T +L++
Sbjct: 155 IEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLID 214
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
A K + + N + +V +YN++I FCK +D A +++
Sbjct: 215 ATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQS 274
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
++++ N ++ C +LL +L G P TFN +I+ LC+ AL+ L
Sbjct: 275 DVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVL 334
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
M + G PN+ ++N LI+ C + R++ + M + PDI T+N L+ + C+
Sbjct: 335 EMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKD 394
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
K++ A + + G P SY+ +I L+K G+ + A + M G PD T
Sbjct: 395 GKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITC 454
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
++ L ++G+ EA K GI +F
Sbjct: 455 TSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAF 487
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 125/295 (42%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN +I K +D A + +++ C+ D ++N+++ +C G +A
Sbjct: 236 GCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDA 295
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+ M G P+V T+ ILI+ C + + VLE+M + PN + L+ G
Sbjct: 296 MKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQG 355
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+A E L + R + N LL L + +A IL ++ +G P
Sbjct: 356 FCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPS 415
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+++ + L+ +L+ +G+KP T ++ L + G+ E ++ +
Sbjct: 416 LISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFH 475
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
++ + N YN ++ CK A + +M P ++ TLI G
Sbjct: 476 YLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKG 530
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 62/125 (49%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G SPS YN VID L+K +LA ++M KPD T ++ G+ R G
Sbjct: 407 LSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGK 466
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V EA++ ++G G PN + Y ++ G C A++ + L M P EA+ +
Sbjct: 467 VHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTT 526
Query: 121 LVHGV 125
L+ G+
Sbjct: 527 LIKGI 531
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 99/248 (39%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS +N +I+ L + + A + M P+ ++N LI G C +D A
Sbjct: 306 GCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRA 365
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ M G P++ TY IL+ C +V + +L + + P+ + +++ G
Sbjct: 366 IEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDG 425
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A ELL + + C +++ LS EA + G P
Sbjct: 426 LLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPN 485
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ + L + L + G KP ++Y L++ + G E + N
Sbjct: 486 AFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSN 545
Query: 245 HVFKDRLV 252
++ LV
Sbjct: 546 ELYSRGLV 553
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 6/169 (3%)
Query: 330 SMIDCLCRAHR---FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
S I LCR R E+ L M G P+ + LIR C IG + R+ +
Sbjct: 71 SEIHHLCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGIL 130
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ D ++N LI ++C+ +IE+A + + P+ +Y A++ +L G+
Sbjct: 131 EESGAVIDANSYNVLINAYCKSGEIEEALRVLDHT---SVAPNAATYDAVLCSLCDRGKL 187
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+A Q Q+ C PD T ++++ ++ +A + + +G
Sbjct: 188 KQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKG 236
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
Query: 367 IRSLCAI---GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
I LC + G++ R + M PD+ ALI+ FC++ + + A + +
Sbjct: 73 IHHLCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEE 132
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G D SY+ LI A KSG +EA + ++ P++ T + +L +L +G+ ++
Sbjct: 133 SGAVIDANSYNVLINAYCKSGEIEEALRV---LDHTSVAPNAATYDAVLCSLCDRGKLKQ 189
Query: 484 AHDIVKTSKERGISFKSFP 502
A ++ +R + K +P
Sbjct: 190 AMQVL----DRQLQSKCYP 204
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/468 (25%), Positives = 206/468 (44%), Gaps = 36/468 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PST +N VI L+ A F++M+ D PD FTYNILIH +C+ + EA
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMA-DSGIPDAFTYNILIHWLCQRRKIREA 405
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L ++M G P + TY L+ +C + E ++ M + PN T +L+ G
Sbjct: 406 LNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKG 465
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
KA+ LL + NTL+ L E +L++ G++P
Sbjct: 466 HINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPT 525
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + + + + +G+ P
Sbjct: 526 AMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPP-------------------------- 559
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
N+ +Y ID +CK + D A ++ ++R + + P++ +N+LI G C++
Sbjct: 560 ---------NIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEG 610
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ ++LV++L+ G P+ +NS I E+AL +M++ G+ +T TY
Sbjct: 611 NMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYT 670
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI G+V +L+L+ +M A PD TF AL CR I+ A K M L
Sbjct: 671 TLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRL 730
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
+RP+ Y+ LI +++G+ EA + M + PD T ++++
Sbjct: 731 DIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/490 (23%), Positives = 220/490 (44%), Gaps = 3/490 (0%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
+++ V+ A K D A F +M + +PD+ ++ I +C++ + AL ++++M
Sbjct: 179 MFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKM 238
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
+ G+ P +T+ ++D R+ E + + + + +L+HG +
Sbjct: 239 QDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREV 298
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
KA ++ + R+ L V T+L R + M +A + R+M D G LP ++ F+
Sbjct: 299 RKALDIFEETL-RDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNM 357
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L+ + + G+ F TY +L+ L + + E + +
Sbjct: 358 VIKGLLNDKLWKDAVSLFKEMADSGIPDAF-TYNILIHWLCQRRKIREALNLWEKMNETG 416
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+ + +Y+ ++ C+C MD A ++ EM + PN+VT+ TL+ GH A K
Sbjct: 417 VKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAY 476
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
LL + + G + +T+N++I+ LC R + + L G P +TYN +I
Sbjct: 477 ALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGF 536
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
G + + ++Q+M A I P+I T+ + I +C+ + + A K + GLRPD
Sbjct: 537 IKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDI 596
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+Y++LI + G A Q + M ++G P+ N + EEA + +
Sbjct: 597 AAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEK 656
Query: 491 SKERGISFKS 500
+ GI +
Sbjct: 657 MIKEGIDLDT 666
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 206/464 (44%), Gaps = 1/464 (0%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F++ D P TY +LI G G+ ++A L +QM G P+ + ++I G N
Sbjct: 305 FEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLN 364
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
K + + + M + + P+ T L+H + + +A L + E +
Sbjct: 365 DKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVT 423
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
++LL N EA + +M +G+ P T+ + + ++ +L
Sbjct: 424 YHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMK 483
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+ GV TY L+ L GR E L + V +YN +I+ F K MM
Sbjct: 484 QNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMG 543
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + ++M + I PN+VT+ + I G+CK + ++L + G +PD +NS+I
Sbjct: 544 SAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLI 603
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
C+ AL L M++ G+ PN YN I + + +LRL++KM + I
Sbjct: 604 FGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGID 663
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
D T+ LI F + + A K + M+ G PD+ +++AL L ++G D+A++
Sbjct: 664 LDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKL 723
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M + P+ N+++ ++ G+ +EA + ER I
Sbjct: 724 LDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKI 767
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 208/474 (43%), Gaps = 1/474 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P R+ + I +L K + A L ++M P FT+N ++ + + G ++EAL
Sbjct: 208 IEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEAL 267
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ ++ G +V T L+ G+C + V + + E + P + T L+ G
Sbjct: 268 HIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGC 327
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
P KA+EL + + L N ++ L N+ + +A ++ ++M D G +P++
Sbjct: 328 TEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG-IPDA 386
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + L + E + + + GVKP TY L+ G E +
Sbjct: 387 FTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTE 446
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ NV +Y ++ D+A + EM+ ++ N T+NTLI+G C
Sbjct: 447 MPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGR 506
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V + E+L GF P T+NS+I+ +A A +M G+PPN +TY
Sbjct: 507 VCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTS 566
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
I C +L++ ++ + PDI +N+LI FC+ + A + ML G
Sbjct: 567 FIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDG 626
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
L P+ Y++ I +EA + + M + G + D+ T +++ + G
Sbjct: 627 LLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDG 680
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 176/429 (41%), Gaps = 38/429 (8%)
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
+M G G + + + +++ + R+ + M + P++
Sbjct: 166 AEMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQR------------ 213
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
VC+ + L A+ A +LRKM D G++P TF
Sbjct: 214 -----------------------VCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTF 250
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV-EGDRYLNHVF 247
+ V LV G + E I D + G K LM Y R+V +
Sbjct: 251 NSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHG-YCLQREVRKALDIFEETL 309
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+D LV +Y ++I + M ++A E+CR+MRD + P+ FN +I G D
Sbjct: 310 RDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWK 369
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
L + + G PD FT+N +I LC+ + +AL+ +M E GV P +TY+ L+
Sbjct: 370 DAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLL 428
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
C G + +++L+ +M +P++ T+ L++ +KA M G+
Sbjct: 429 LCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVS 488
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
++++Y+ LI L GR E + E G P + T N I+ ++ G A +
Sbjct: 489 CNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAV 548
Query: 488 VKTSKERGI 496
+ +GI
Sbjct: 549 YQQMCAKGI 557
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 1/245 (0%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
++N V+D K M+ A I E+ ++V TL+ G+C EV K ++
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
L G P T+ +I E A + +M + G+ P+T +N++I+ L
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
++ LF++M AD PD +T+N LI C+ KI +A + M G++P +Y +L
Sbjct: 369 KDAVSLFKEM-ADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSL 427
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ +G DEA + + M G P+ T +++ + + F++A+ ++ K+ G+
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGV 487
Query: 497 SFKSF 501
S +
Sbjct: 488 SCNDY 492
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 85/196 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P YN++I + ++ A M D P+ YN I G + +++EA
Sbjct: 591 GLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEA 650
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LRL ++M G + TYT LIDGF V ++ M + P+ T +L HG
Sbjct: 651 LRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHG 710
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R D A +LL + L+ N L+ N EA + +M +R +P+
Sbjct: 711 LCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPD 770
Query: 185 SSTFDYTVTCLVTGLD 200
+T+D V G D
Sbjct: 771 DTTYDILVGMKSLGSD 786
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 219/491 (44%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN VI L +S A F +M P+ TYN +I G + G ++ RL
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
QM G PN+ TY +L+ G C A R+ E +++ M ++ P+ T L G+ R
Sbjct: 74 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ L +++ + C+ LL L + ++A +L + G +P +
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + DL I + R ++P TY L+ L K + + + +
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K + +V ++N +ID + +++ + +M+ + I ++++F +++ CK+ ++
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ +L ++ P+ +NS+ID + E A + +M GV + +TYN+L+
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 373
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+ LC + + L ++ + PD+ ++N +I + C +KA + M G+R
Sbjct: 374 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 433
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P +Y L+ AL +GR + + + M P S ++++ V+ + +
Sbjct: 434 PTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASL 493
Query: 488 VKTSKERGISF 498
K E+GI+F
Sbjct: 494 KKEMSEKGIAF 504
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 191/403 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN ++ L ++ +D + +M+ PD FTY+IL G+ R G
Sbjct: 81 GPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTM 140
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L + G YT +IL++G C +VA+ +VLE++ + P +L++G
Sbjct: 141 LSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLING 200
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D AF + + R + N L+ L M ++A ++ +M G P
Sbjct: 201 YCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPS 260
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + T L + +L ++G+K ++ +++A K G+ E L+
Sbjct: 261 VETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILD 320
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N YN +ID + + ++A + +M++ ++ ++VT+N L+ G C+ +
Sbjct: 321 DMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSS 380
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + EL+ L G +PD ++N++I C + AL+ L EM ++G+ P TY+
Sbjct: 381 QIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYH 440
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
L+ +L + G V L+Q+M + P + ++ ++ R
Sbjct: 441 TLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 483
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%)
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
E PP+ +YN++I L G + +L++F +M + P+ T+N +I + +E
Sbjct: 9 EGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLE 68
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
+ ML G +P+ +Y+ L+ L ++GR DE + M + PD +T +++
Sbjct: 69 AGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILF 128
Query: 473 ETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ L + G + S ++G+ ++
Sbjct: 129 DGLTRTGESRTMLSLFAESLKKGVMLGAY 157
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 140/614 (22%), Positives = 244/614 (39%), Gaps = 124/614 (20%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG---- 59
G PS YNA++ L + +D+ + ++MS D+FT +C+ G
Sbjct: 201 FGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSD 260
Query: 60 ----------------------------VVDEALRLVKQMEGLGYAPNVYTYTILIDGFC 91
+ DEA+ + +M PNV TY L+ GF
Sbjct: 261 ALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFL 320
Query: 92 NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFM--------- 142
K++ R++ +M PN + SLVH D A++LL R
Sbjct: 321 KKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYV 380
Query: 143 ------------EREP------LTQK-----LVCNTLLYRLSNNSMA---------SEAA 170
E P L +K L + +L +++ + A +A
Sbjct: 381 VYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAF 440
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
I++ M +G++P++ST+ +T L + + + + GV P TY +L+++
Sbjct: 441 QIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSF 500
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
K G + + + + +V +Y ++ + K + +A++I M D APN
Sbjct: 501 CKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNT 560
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLEC----------------GFKPDKFTFNSMIDC 334
+T++ L+ G CK E K E+ ++ P+ T+ ++ID
Sbjct: 561 ITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDG 620
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ------- 387
LC+AH+ DA + L M G PN I Y+ LI C +G + + +F +M
Sbjct: 621 LCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPT 680
Query: 388 ------------ADR----------------ISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
DR +P++ T+ A+I CR+ + +KA K
Sbjct: 681 VHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLS 740
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M G P+ +Y++LI L KSG+ D + Q F M GC P+ T +++ G
Sbjct: 741 MMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAG 800
Query: 480 RFEEAHDIVKTSKE 493
+EAH ++ K+
Sbjct: 801 LLDEAHSLLSEMKQ 814
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/505 (24%), Positives = 227/505 (44%), Gaps = 44/505 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T Y+ VI L ++ ++ A+L FQ+M PD +TY ILI C++G++++A
Sbjct: 450 GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQA 509
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ME +G +P+V TYT L+ + K+V + + M + PN T +LV G
Sbjct: 510 RSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDG 569
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN-NSMASEAAAILRKMGDRGYLP 183
+ + + KA E+ + + T V + + + +S+A P
Sbjct: 570 LCKAGESQKACEVYAKMIG----TSDNVGSDFYFEGEHTDSIA----------------P 609
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ + L + + +LD G +P Y L++ K G+
Sbjct: 610 NVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVF 669
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ K + V++Y +ID K +D A ++ +M + PN+VT+ +I G C+
Sbjct: 670 FRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRI 729
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E K +LL M+ + G P+ T+ S+ID L ++ + + +L ++M+ G PN +TY
Sbjct: 730 GECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTY 789
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+LI CA G + + L +M+ + + +++Q F K F + L
Sbjct: 790 RVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGF---------SKKFIASLG 840
Query: 424 L-------GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ-----NGCNPDSYTSNLI 471
L G+ Y LI + K+GR ++A + M + N + D+YTS +
Sbjct: 841 LLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTS--L 898
Query: 472 LETLVQQGRFEEAHDIVKTSKERGI 496
++ L + E+A ++ +G+
Sbjct: 899 IQALCLASQLEKAFELYSEITRKGV 923
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 181/415 (43%), Gaps = 11/415 (2%)
Query: 49 NILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
N+++ CR G +AL + +++ GY P+ TY L+ A ++ FRV + M E
Sbjct: 176 NVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSE 235
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT-QKLVCNTLLYRLSNNSMAS 167
C ++ TV + C + + L++ +ERE ++C ++ L S+
Sbjct: 236 LGFCTDKFTVGCFAQAL--CKEGRWSDALVM--IEREDFKLDTVLCTQMISGLMEASLFD 291
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
EA + L +M +P T+ + + L I+ + G P S + L+
Sbjct: 292 EAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLV 351
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC------KVNMMDRATEICREM 281
+ A + LN + YN+ I C +++ A ++ EM
Sbjct: 352 HSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEM 411
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
N V C + K +++ +++ GF PD T++ +I LC A +
Sbjct: 412 LASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKV 471
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
E A EM GV P+ TY ILI S C +G + ++ F +M++ SP + T+ AL
Sbjct: 472 EKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTAL 531
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
+ ++ + ++ +A F M+ G P+ +YSAL+ L K+G +A + + M
Sbjct: 532 LHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKM 586
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 162/393 (41%), Gaps = 60/393 (15%)
Query: 143 EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
+RE L + L N ++ + + ++A L ++ D GY P +T++ V L T ++
Sbjct: 167 DREVLGRLL--NVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMD 224
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG-------DRYLNHVFKDRLVSNV 255
+ + G T +AL K GR + D L+ V +++S +
Sbjct: 225 MGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGL 284
Query: 256 NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
+ ++ D A MR PN+VT+ TL++G K ++ + ++ M
Sbjct: 285 M----------EASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISM 334
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI-------- 367
++ G P+ FNS++ C A + A L+ M G PP + YNI I
Sbjct: 335 MMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEE 394
Query: 368 ---------------------------------RSLCAIGDVARSLRLFQKMQADRISPD 394
R LC +G ++ ++ + M PD
Sbjct: 395 LPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPD 454
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
T++ +I C K+EKA F M ++G+ PD ++Y+ LI + K G ++A+ F
Sbjct: 455 TSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFD 514
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
ME GC+P T +L ++ + +A DI
Sbjct: 515 EMESVGCSPSVVTYTALLHAYLKTKQVPQASDI 547
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 174/441 (39%), Gaps = 56/441 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLA---YLK-------------FQQMSVDQCKPDRFTY 48
G +P+T Y+A++D L K+ A Y K F+ D P+ TY
Sbjct: 555 GCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTY 614
Query: 49 NILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
LI G+C+ V +A L+ M G PN Y LIDGFC ++ V M +
Sbjct: 615 GALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSK 674
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE 168
P T SL+ +F+ + +L I+
Sbjct: 675 CGYLPTVHTYTSLIDAMFK----DRRLDLAIK---------------------------- 702
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
+L +M + P T+ + L + + +L KRG P TY L++
Sbjct: 703 ---VLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLID 759
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
L K+G+ + + N +Y ++I+ C ++D A + EM+
Sbjct: 760 GLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPK 819
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+ + +++ G K + + LL L G + +ID +A R E AL+
Sbjct: 820 YVQGYCSVVQGFSK--KFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELH 877
Query: 349 SEMVEWGVPPNTI---TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
EM+E N TY LI++LC + ++ L+ ++ + P++ F LI+
Sbjct: 878 KEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGL 937
Query: 406 CRMNKIEKAEKAFFSMLTLGL 426
++NK +A + +SM G+
Sbjct: 938 IKVNKWNEALQLCYSMCDEGV 958
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 146/359 (40%), Gaps = 75/359 (20%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G P+ Y ++IDA+ K +DLA QM C P+ TY +I G+CRIG
Sbjct: 672 MSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGE 731
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+AL+L+ ME G PNV TYT LIDG + +V ++ M + PN T R
Sbjct: 732 CQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRV 791
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L++ + EA ++L +M +
Sbjct: 792 LIN-----------------------------------HCCAAGLLDEAHSLLSEM-KQT 815
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
Y P+ V G C ++ F K +F L L+E L G
Sbjct: 816 YWPK----------YVQGY-----CSVVQGFSK-----KFIASLGLLEELESHG------ 849
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV---TFNTLI 297
+VS Y ++ID F K +++A E+ +EM + + N+ T+ +LI
Sbjct: 850 ----------MVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLI 899
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
C +++ K EL + G P+ F +I L + +++ +AL M + GV
Sbjct: 900 QALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/480 (23%), Positives = 209/480 (43%), Gaps = 71/480 (14%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P + N I LVK N ++ A ++M V +PD +YN LI G C + +D+A
Sbjct: 262 GVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDA 321
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM-KERNVCPNEATVRSLVH 123
L L+ +M G P+ +Y ++ C ++V EV R++E M + N+ P++ T
Sbjct: 322 LELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTY----- 376
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
NTL+Y LS + A +A LR+ ++G+
Sbjct: 377 ------------------------------NTLIYALSKHGHADDALVFLREAEEKGFHI 406
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ + V ++++ ++ +G P
Sbjct: 407 DKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNP------------------------- 441
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+V +Y +ID FC+V +D A ++ ++M PN VT+ L++G C +
Sbjct: 442 ----------DVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHN 491
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + RE++ + E + P+ T+++++ L R + +A D EM+E G PN +
Sbjct: 492 GKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDI 551
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+LI+SLC +V + + ++ + ++ F ++I FC++ ++ A M
Sbjct: 552 NLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYL 611
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
PD +Y+ L AL K R DEA + + M G +P T ++ Q GR ++
Sbjct: 612 SNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDD 671
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/461 (23%), Positives = 195/461 (42%), Gaps = 3/461 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD-QCKPDRFTYNILIHGICRIG 59
+ F G P Y V+ L K ++ + M + PD+ TYN LI+ + + G
Sbjct: 328 MPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHG 387
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
D+AL +++ E G+ + Y+ ++D FC K + + ++ M + P+ T
Sbjct: 388 HADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYT 447
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+++ G R +A ++L + + + LL L +N + EA ++ +
Sbjct: 448 AIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEH 507
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
+ P + T+ + L L+E C + I++G P LL+++L + V
Sbjct: 508 WWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGA 567
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+YL NV ++ VI FC++ +D A + +M + P+ +T+ TL
Sbjct: 568 KKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDA 627
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
K + + + EL+V +L G P T+ ++I C+ R +D + L +M+ P
Sbjct: 628 LGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMI--ARQPF 685
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
YN +I LC G+ + +L K+ D T + LI+S+ A K
Sbjct: 686 KTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSAYKVAC 745
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
M L PD + K L+ G EA L + G
Sbjct: 746 QMFRRNLIPDLKLCEKVTKKLVLDGMPAEADDLMLRFVERG 786
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
++ D + +M+D L + + A L M G+ + ++ ++ S G + +L
Sbjct: 193 YRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNAL 252
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
R+ MQ + PD+ N I + NK+EKA + M G+ PD SY+ LIK
Sbjct: 253 RILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGY 312
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
R D+A + M GC PD + ++ L + + EE +++
Sbjct: 313 CDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMEN 362
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 204/457 (44%), Gaps = 35/457 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + ++ + K N D+ F+QM + P T NI++H +C A
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LG+ P++ T+T L++G+C+ R+ + + + + PN T +L+ R
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLI----R 196
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
CL N + A + +MG G P T
Sbjct: 197 CL-------------------------------CKNRHLNHAVELFNQMGTNGSRPNVVT 225
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ VT L + +L +KR ++P T+ L++A K G+ +E N +
Sbjct: 226 YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ + +V +Y +I+ C ++D A ++ M PN V + TLI G CK V
Sbjct: 286 QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVE 345
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
++ + + G + T+ +I C R + A + ++M PP+ TYN+L+
Sbjct: 346 DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G V ++L +F+ M+ + +I T+ +IQ C++ K+E A F S+ + G++
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
P+ +Y+ +I + G EA F M+++G P+
Sbjct: 466 PNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 198/434 (45%)
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
++AL L +M P++ +T L+ R V + E M+ + P T +
Sbjct: 65 NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+H V P +A L + M+ + +LL + + +A A+ ++ G+
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P T+ + CL LN + + G +P TY L+ L + GR +
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + K R+ NV ++ +ID F KV + A E+ M + P++ T+ +LI+G C
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC 304
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ + R++ ++ G P++ + ++I C++ R ED + EM + GV NTI
Sbjct: 305 MYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI 364
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY +LI+ C +G + +F +M + R PDI T+N L+ C K+EKA F M
Sbjct: 365 TYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ + +Y+ +I+ + K G+ ++A F S+ G P+ T ++ ++G
Sbjct: 425 RKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLI 484
Query: 482 EEAHDIVKTSKERG 495
EA + K KE G
Sbjct: 485 HEADSLFKKMKEDG 498
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 126/238 (52%)
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
N+V+ C C + RA+ +M P+LVTF +L++G+C + L +L
Sbjct: 122 NIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILG 181
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
GFKP+ T+ ++I CLC+ A++ ++M G PN +TYN L+ LC IG
Sbjct: 182 MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD 241
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+ L + M RI P++ TF ALI +F ++ K+ +A++ + M+ + + PD F+Y +LI
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
L G DEA+Q F ME+NGC P+ ++ + R E+ I ++G+
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 156/363 (42%), Gaps = 41/363 (11%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P+ Y +I L K+ ++ A F QM + +P+ TYN L+ G+C IG +
Sbjct: 182 MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD 241
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L++ M PNV T+T LID F ++ E + +M + +V P+ T SL++
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 124 GV--FRCLDPHKAFELLIRFMEREP-LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
G+ + LD + + MER +++ TL++ + + I +M +G
Sbjct: 302 GLCMYGLLDEARQ---MFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ ++T YTV L++ GR
Sbjct: 359 VV--ANTITYTV---------------------------------LIQGYCLVGRPDVAQ 383
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
N + R ++ +YN+++D C +++A I MR R++ N+VT+ +I G
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGM 443
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK +V +L L G KP+ T+ +MI CR +A +M E G PN
Sbjct: 444 CKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNE 503
Query: 361 ITY 363
Y
Sbjct: 504 SVY 506
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P F ++ + + +R++ + +M G+PP T NI++ +C R+
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
KM PD+ TF +L+ +C N+IE A F +L +G +P+ +Y+ LI+ L K
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ + A + F M NG P+ T N ++ L + GR+ +A +++ +R I
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRI 254
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P R YN ++D L + ++ A + F+ M + + TY I+I G+C++G V++A L
Sbjct: 396 PDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDL 455
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+ G PNV TYT +I GFC + E + + MKE PNE+ +
Sbjct: 456 FCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 215/462 (46%), Gaps = 30/462 (6%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P F + ++ + +I A+ L +QME G A N+ T ILI+ F + F V
Sbjct: 58 PPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSV 117
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
+ ++ PN T+ +L+ G+ CL K+ TL+ L
Sbjct: 118 FANILKKGYDPNVITLTTLIKGL--CL--------------------KVSYGTLINGLCK 155
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
A A +LR++ + P ++ + + +NE + + G+ P T
Sbjct: 156 VGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVT 215
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y L+ + G+ + N + + + +V ++N+++D FCK M + M
Sbjct: 216 YSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMM 275
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+ I PN+VT+ +L+ G+C +V+K + + + G PD ++N MI+ C+ + +
Sbjct: 276 KQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVD 335
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+A++ +M + PN +TY LI LC G ++ +L+L +M + PDI T+++++
Sbjct: 336 EAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSIL 395
Query: 403 QSFCRMNKIEKA--------EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+ C+ ++++KA ++ F + G D ++Y+ +I+ G F+EA
Sbjct: 396 DALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLS 455
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
ME NG PD+ T +I+ +L ++ + A +++ RG+
Sbjct: 456 KMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 123/253 (48%), Gaps = 13/253 (5%)
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
+ ++ K+N A + R+M + IA NLVT N LI+ + + + + +L
Sbjct: 63 FGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANIL 122
Query: 318 ECGFKPD-------------KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ G+ P+ K ++ ++I+ LC+ + AL L + V PN + YN
Sbjct: 123 KKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYN 182
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I S+C + V + L+ +M ++ ISPD+ T++ALI F + K++ A F M+
Sbjct: 183 TIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILE 242
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
++PD ++++ L+ K G+ E K F M + G P+ T +++ + +A
Sbjct: 243 NIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKA 302
Query: 485 HDIVKTSKERGIS 497
+ I T + G++
Sbjct: 303 NSIFNTMAQGGVN 315
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 142/318 (44%), Gaps = 12/318 (3%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ +YN +ID++ K ++ A+ + +M + PD TY+ LI G +G + +A+
Sbjct: 174 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAI 233
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L +M P+VYT+ IL+DGFC ++ E V +M ++ + PN T SL+ G
Sbjct: 234 DLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 293
Query: 126 FRCLDPHKAFELLIRFMER--EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+KA + + P TQ N ++ EA + +KM + +P
Sbjct: 294 CLVKQVNKANSIFNTMAQGGVNPDTQSY--NIMINGFCKIKKVDEAMNLFKKMHCKNIIP 351
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ + L ++ ++D RGV P TY +++AL K + + L
Sbjct: 352 NVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALL 411
Query: 244 ----NHVFKDRLVSNVN----SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
+ VF+D V N +Y ++I FC + + A + +M D P+ T+
Sbjct: 412 TKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEI 471
Query: 296 LISGHCKDAEVHKTRELL 313
+I K E +LL
Sbjct: 472 IILSLFKKDENDMAEKLL 489
>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g14770, mitochondrial-like, partial [Cucumis
sativus]
Length = 697
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 221/496 (44%), Gaps = 7/496 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G++ + Y ++DAL K+ + A + M V D +LI G+ + G + E
Sbjct: 53 MGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKE 112
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L + L PN TY+ LIDG C + L M+E++ PN T SL++
Sbjct: 113 AEYLFCNLYQLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLIN 172
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + H AF++L + + + + LL A + KM G
Sbjct: 173 GYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKD 232
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
D V + + E ++ G+KP Y LM+ K+G+
Sbjct: 233 NVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLA 292
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +V ++ ++N++I+C K+ D + I MR+ ++P+L T+NT+++G+ K
Sbjct: 293 QEMTSKNVVFDIVTFNVLINCLFKLGKSDTES-IYSAMREMGLSPDLATYNTMLNGNFKK 351
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
EL + P+ T N MI+ LC A R E+A+D L EMV G+ P + TY
Sbjct: 352 GNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTY 411
Query: 364 NIL--IRSLCAIGD-VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
IL I S D + ++ L MQ ++ D+Y N LI + C++ KA
Sbjct: 412 RILLNISSKSRRADTILQTHELLVNMQL-KVDKDVY--NILISNLCKLGMTRKATAVLKD 468
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G+ D +Y+ALI S A T+ +M +PD T NL+L L + G
Sbjct: 469 MEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGL 528
Query: 481 FEEAHDIVKTSKERGI 496
EA D++ K+RG+
Sbjct: 529 IHEADDLLSEIKKRGL 544
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 132/520 (25%), Positives = 224/520 (43%), Gaps = 42/520 (8%)
Query: 16 VIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLG 75
+ID L KS I A F + P+ TY+ LI G C++G ++ A + +ME
Sbjct: 100 LIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKD 159
Query: 76 YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAF 135
PNV TY+ LI+G+ + + F+VL M +N PN T L+ G F+ A
Sbjct: 160 CVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIAL 219
Query: 136 ELLI-------------------------RFMEREPLTQKLVCNTLLYRLSN-------- 162
+L R E E L K+ L L N
Sbjct: 220 DLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGF 279
Query: 163 --NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
+ S A + ++M + + + TF+ + CL L ++T I + G+ P
Sbjct: 280 LKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFK-LGKSDTESIYSAMREMGLSPDL 338
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
+TY ++ +K G N + +L+ N + N++I+ C+ M+ A +I +E
Sbjct: 339 ATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKE 398
Query: 281 MRDRDIAPNLVTFNTL--ISGHCKDAE-VHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
M + P T+ L IS + A+ + +T ELLV + K DK +N +I LC+
Sbjct: 399 MVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNM---QLKVDKDVYNILISNLCK 455
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
A L +M E G+ +T TYN LI C + R+ + M ++R+SPDI T
Sbjct: 456 LGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIET 515
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+N L+ + I +A+ + GL P+ +Y L+ K E + + M
Sbjct: 516 YNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMV 575
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G P N+++ + G+ ++A +++ + +G+S
Sbjct: 576 IKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVS 615
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 123/500 (24%), Positives = 223/500 (44%), Gaps = 15/500 (3%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y ++D K+ D+A + +M K + F + ++ + R G ++EA L
Sbjct: 197 PNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEEL 256
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
V +M G P++ YT L+DGF + +V+ + + M +NV + T L++ +F+
Sbjct: 257 VAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFK 316
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
E + M L+ L NT+L + A + +M R +P +
Sbjct: 317 L--GKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAI 374
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T + + L + IL + G+ P +TY +L+ K+ R + +
Sbjct: 375 TCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELL 434
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+L + + YN++I CK+ M +AT + ++M +R I + T+N LI G+C + +
Sbjct: 435 VNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHL 494
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ +L PD T+N ++ L +A +A D LSE+ + G+ PN TY L
Sbjct: 495 KRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETL 554
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ C + + LR++ +M P +N LI F +M K+++A++ M T G+
Sbjct: 555 MCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGV 614
Query: 427 RPDNFSYSALI------------KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
P +Y LI + +K EAK+ F+ M G P T I T
Sbjct: 615 SPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGFVPCESTQACISST 674
Query: 475 LVQQGRFEEAHDIVKTSKER 494
G+ +A ++K++ +R
Sbjct: 675 FAAPGKKADARMLLKSTYKR 694
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 174/370 (47%), Gaps = 36/370 (9%)
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
++LY L + SE +LR+MG G + ++ + L + E L I R
Sbjct: 29 SILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVR 88
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G +L++ L+K+G+ E + ++++ LV N +Y+ +ID CK+ ++ A
Sbjct: 89 GNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDGRCKLGDINGA 148
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL----------------- 317
EM ++D PN++T+++LI+G+ K +H ++L ++
Sbjct: 149 ESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDG 208
Query: 318 ------------------ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ G K + F ++ ++ + R+ R E+A + +++M G+ P+
Sbjct: 209 SFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPD 268
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+ Y L+ G V+ +L L Q+M + + DI TFN LI ++ K + E +
Sbjct: 269 LVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSD-TESIYS 327
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+M +GL PD +Y+ ++ K G + A + + M+ P++ T N+++ L + G
Sbjct: 328 AMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAG 387
Query: 480 RFEEAHDIVK 489
R E A DI+K
Sbjct: 388 RMENAIDILK 397
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 129/300 (43%), Gaps = 4/300 (1%)
Query: 201 LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNM 260
L E + + + G+ P T+ ++ L K G+ EG L + K + N SY +
Sbjct: 5 LEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTI 64
Query: 261 VIDCFCKVNMMDRA--TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
++D K + A T C +R + +++ LI G K ++ + L L +
Sbjct: 65 LLDALFKAGKVAEALMTLACMIVRGNNF--DVIACTVLIDGLFKSGQIKEAEYLFCNLYQ 122
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
P+ T++++ID C+ A L EM E PN ITY+ LI G +
Sbjct: 123 LNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHD 182
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+ ++ +KM P+I T+ L+ + + A + M GL+ + F A +
Sbjct: 183 AFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVN 242
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
+ +SGR +EA++ M G PD +++ ++ G+ A ++ + + + F
Sbjct: 243 NMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVF 302
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 109/233 (46%)
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
N ++ A + EM I P++VTF +++ G CK ++ + + LL + + G + ++
Sbjct: 3 NGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSY 62
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
++D L +A + +AL L+ M+ G + I +LI L G + + LF +
Sbjct: 63 TILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQ 122
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ P+ T++ALI C++ I AE A M P+ +YS+LI +K G +
Sbjct: 123 LNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHD 182
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
A + M P+ T ++L+ + G + A D+ K+ G+ F
Sbjct: 183 AFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVF 235
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 209/462 (45%), Gaps = 3/462 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ + G SP + + +I KS S + +M P+ YN LI +C+ G+
Sbjct: 20 MKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGM 79
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ EA +K+M APNV +Y I+IDG+C A+ + + L M+E P S
Sbjct: 80 LAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSS 138
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+V + + KA ++ + + N LL L EA + R M RG
Sbjct: 139 IVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRG 198
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T++ + L L+E +L+ + V P F TY L++ L K R +
Sbjct: 199 CKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAY 258
Query: 241 RYLNHVFKDRLVSNVNSYN--MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + +Y+ ++I+ CK A E+ +EMR R I+P +VT+NTL+
Sbjct: 259 EVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLE 318
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G A++ EL +L+ P+ FT+ +I LC+ + E+A LS M + G P
Sbjct: 319 GLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVP 378
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ + +L+ L G + + L+++M + + N L+ R +++A+
Sbjct: 379 SLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFL 438
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
M G+ PD F+Y L+ L G+ D+A++ + ++G
Sbjct: 439 KQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 209/457 (45%), Gaps = 13/457 (2%)
Query: 52 IHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNV 111
I + +V +A +V++M+ G++P+V ++ +LI GF + L+ M E +
Sbjct: 1 IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60
Query: 112 CPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA----- 166
PN +L+ CL +++R P Q N + Y + +
Sbjct: 61 FPNAILYNNLIS----CLCKAGMLAEAESYLKRMP--QHCAPNVVSYNIIIDGYCKARNI 114
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
+A A LR+M + G+ P + V ++++ + +G +P + +L
Sbjct: 115 EKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVL 174
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ L++A + E + +V +YN +I CK +D A + M+ D+
Sbjct: 175 LSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDV 234
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLE--CGFKPDKFTFNSMIDCLCRAHRFEDA 344
+P VT+ TLI CK A + + E+ + E C ++ +I+ LC+A R +A
Sbjct: 235 SPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEA 294
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
+ EM G+ P +TYN L+ L + + ++ L M +P+++T+ LI S
Sbjct: 295 KEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISS 354
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
C+ +++E+A K +M G P + L+ L ++GR D+A + + M + C
Sbjct: 355 LCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQL 414
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+SN++L+ ++++G +EA D +K + GI F
Sbjct: 415 VGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKF 451
>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 131/523 (25%), Positives = 227/523 (43%), Gaps = 48/523 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P+ ++ +IDA K ++D A++ F M+ + PD Y+ILI G+ + G +++
Sbjct: 301 IGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLED 360
Query: 64 ALRLV-----------------------------------KQMEGLGYAPNVYTYTILID 88
RL+ K+M G +PNV + +ILI
Sbjct: 361 GQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIK 420
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
GFC R+ E + + + P+ T +L+ G + + F L +++
Sbjct: 421 GFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEP 480
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV------TCLVTGLDLN 202
+V + L+ L + +A + +RG P T + + C+V + +
Sbjct: 481 DTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVY 540
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
G+L+ +K TY +L++ + GR E + K +V +Y +I
Sbjct: 541 YLMGMLN------IKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLI 594
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
D CK+ I M +AP++ +N LI+ H ++ + L V ++E G K
Sbjct: 595 DGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPK 654
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
PD FTFN+MI C C R +DA+ ++M + PN IT+ ILI + C G + ++ +
Sbjct: 655 PDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLM 714
Query: 383 FQKMQADRISPDIYTFNALIQSFCR-MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
F KM + P++ T++ LI + + + +E K + ML + P+ SYS LI L
Sbjct: 715 FSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLC 774
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
K G EA F PD +++ + GR EA
Sbjct: 775 KRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEA 817
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 211/444 (47%), Gaps = 26/444 (5%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQM--EGLGYAPNVYTYTI--LIDGFCNAKRVAEVFRV 102
Y LI CR G+ D+++ + + +G+ +PNV + LID C V + +
Sbjct: 169 VYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGEL 228
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQK------LVCNTL 156
M+E+ E + ++ E+ +RF + L Q + CN +
Sbjct: 229 CSAMREQPFSVYEFVMNRFMN--------KGEVEMGLRF--HKALVQGGFGLDIITCNKI 278
Query: 157 L---YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
L + ++ +A + ++ ++G + P TF + +L++ + D
Sbjct: 279 LKGIWMQNDIGVADDYFNMVVRIGPK---PNVVTFSTLIDAYCKEGNLDKAFVLFDVMAG 335
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
GV P Y +L++ L+KAGR +G R L + +V ++ +D + K+ + R
Sbjct: 336 NGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGR 395
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
+I + M + I+PN+V+ + LI G C++ + + L V +L+ GF+P T++++I
Sbjct: 396 VIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIA 455
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
C++ D +M++ P+TI Y++LI LC G V +LR F + +SP
Sbjct: 456 GFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSP 515
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
+++T N L+ SFCR+ I A K ++ M L ++ D +Y+ LIK + GR DEA F
Sbjct: 516 NVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLF 575
Query: 454 LSMEQNGCNPDSYTSNLILETLVQ 477
M + PD T +++ L +
Sbjct: 576 FQMLKKDFKPDVITYCTLIDGLCK 599
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 210/470 (44%), Gaps = 5/470 (1%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N ++ + N I +A F + KP+ T++ LI C+ G +D+A L M G
Sbjct: 276 NKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAG 335
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G P++ Y+ILIDG A R+ + R+L + ++ + + S + + D +
Sbjct: 336 NGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGR 395
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
++ R + + C+ L+ N EA + ++ G+ P T+ +
Sbjct: 396 VIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIA 455
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
+L + + + IK+ +P Y +L+ L K G + R+ L
Sbjct: 456 GFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSP 515
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV + N ++D FC++ + A ++ M +I + VT+ LI G + V + L
Sbjct: 516 NVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLF 575
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+L+ FKPD T+ ++ID LC+ + L M + V P+ YN+LI
Sbjct: 576 FQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSRE 635
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G + +L LF + PD++TFN +I +C +++ A + F M + LRP+ ++
Sbjct: 636 GHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITF 695
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+ LI A + GR D+A F M + G P NL+ + + G F+
Sbjct: 696 TILIDAFCREGRMDDAMLMFSKMLEEGPEP-----NLVTYSCLIHGYFKS 740
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 117/463 (25%), Positives = 213/463 (46%), Gaps = 1/463 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI +++ +DA VK + +++M + P+ + +ILI G C+ G + EA
Sbjct: 372 GIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEA 431
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L Q+ LG+ P++ TY+ LI GFC + + + F + E M ++ P+ L++G
Sbjct: 432 CGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLING 491
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A + + R NTLL A + MG +
Sbjct: 492 LCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKAD 551
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T+ + ++E + +K+ KP TY L++ L K + G +
Sbjct: 552 TVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFD 611
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K+ + ++ YN++I+ + ++ A + + +R P++ TFNT+I +C
Sbjct: 612 FMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFK 671
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +L + +P+ TF +ID CR R +DA+ S+M+E G PN +TY+
Sbjct: 672 RLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYS 731
Query: 365 ILIRSLCAIGDVARS-LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI + S L+L+ +M + I+P+I +++ LI C+ +++A AF L
Sbjct: 732 CLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALD 791
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
L PD +Y+ LI+ K GR EA + +M N PD +
Sbjct: 792 KHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRF 834
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 190/429 (44%), Gaps = 36/429 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG PS Y+A+I KS ++ + ++ M +C+PD Y++LI+G+C+ G+V +
Sbjct: 441 LGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGD 500
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
ALR Q G +PNV+T L+D FC K + +V +M N+ + T L+
Sbjct: 501 ALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIK 560
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + +A L + ++++ + TL+ L +S I M P
Sbjct: 561 GAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAP 620
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ + ++ + L G+ ++RG KP
Sbjct: 621 DIAIYNVLINMHSREGHLEAALGLFVHVVERGPKP------------------------- 655
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+V ++N +I C+C +D A ++ +M + PN +TF LI C++
Sbjct: 656 ----------DVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCRE 705
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR-FEDALDCLSEMVEWGVPPNTIT 362
+ + +LE G +P+ T++ +I ++ E L +EM+E + PN ++
Sbjct: 706 GRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVS 765
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y+ILI LC G + + F+ + PD+ + LI+ +C++ ++ +A + +ML
Sbjct: 766 YSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNML 825
Query: 423 TLGLRPDNF 431
L PD F
Sbjct: 826 LNRLTPDRF 834
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/455 (23%), Positives = 200/455 (43%), Gaps = 6/455 (1%)
Query: 44 DRFTYNILIHGICR---IGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
D T N ++ GI IGV D+ +V + +G PNV T++ LID +C + + F
Sbjct: 271 DIITCNKILKGIWMQNDIGVADDYFNMVVR---IGPKPNVVTFSTLIDAYCKEGNLDKAF 327
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
+ ++M V P+ L+ G+F+ LL+ +++ + ++ +
Sbjct: 328 VLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAY 387
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
I ++M + G P + + + E CG+ +K G +P
Sbjct: 388 VKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSI 447
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY L+ K+G +G + K R + Y+++I+ CK ++ A +
Sbjct: 448 LTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQ 507
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
+R ++PN+ T NTL+ C+ + ++ ++ K D T+ +I + R
Sbjct: 508 AVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGR 567
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
++AL +M++ P+ ITY LI LC + + L +F M + ++PDI +N
Sbjct: 568 VDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNV 627
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI R +E A F ++ G +PD F+++ +I R D+A Q F M
Sbjct: 628 LINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQ 687
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
P++ T ++++ ++GR ++A + E G
Sbjct: 688 LRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEG 722
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 135/282 (47%)
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
FS Y +M G G R+ + + ++ + N ++ N + A +
Sbjct: 237 FSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFN 296
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
+ PN+VTF+TLI +CK+ + K L ++ G PD ++ +ID L +A
Sbjct: 297 MVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAG 356
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
R ED L ++ G+ + + ++ + + IGD+ R ++++++M + ISP++ + +
Sbjct: 357 RLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCS 416
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI+ FC+ +I +A F +L LG P +YSALI KSG + + M +
Sbjct: 417 ILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKK 476
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
C PD+ ++++ L +QG +A + RG+S F
Sbjct: 477 RCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVF 518
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 129/327 (39%), Gaps = 36/327 (11%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ L I T Y +I + +D A + F QM KPD TY LI G+C++
Sbjct: 543 MGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKK 602
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
L + M AP++ Y +LI N+ E + +
Sbjct: 603 SSAGLCIFDFMCKNAVAPDIAIYNVLI----------------------NMHSREGHLEA 640
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
A L + +ER P NT++ N +A + KM
Sbjct: 641 -------------ALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQ 687
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE-G 239
P + TF + +++ + ++ G +P TY L+ +K+ +E G
Sbjct: 688 LRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESG 747
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ N + ++ + N+ SY+++ID CK +M A+ R D+ + P+++ + LI G
Sbjct: 748 LKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRG 807
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKF 326
+CK + + L +L PD+F
Sbjct: 808 YCKVGRLTEAMMLYDNMLLNRLTPDRF 834
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 191/425 (44%), Gaps = 1/425 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P + +N ++ L++SN D A+ F ++ + D +++ I+I G C G +
Sbjct: 119 GHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELK-SKVVLDAYSFGIMIKGCCEAGYFVKG 177
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL+ +E G +PNV YT LIDG C V + M + PN T L++G
Sbjct: 178 FRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNG 237
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ + F++ + N L+ N M +A + +M ++G
Sbjct: 238 FFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACG 297
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L G E ++ K G+ P TY +L+ G+ R N
Sbjct: 298 VMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFN 357
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L + +YN +I + KV + A ++ +EM +R IAP+ VT+ LI +
Sbjct: 358 QLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLN 417
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
K E+ ++ + G PD +T++ +I LC ++A + E + PN++ YN
Sbjct: 418 YTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYN 477
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I C G R+LRL +M + P++ +F + I CR K ++AE M+
Sbjct: 478 TMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINS 537
Query: 425 GLRPD 429
GL+P
Sbjct: 538 GLKPS 542
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 141/267 (52%)
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+ G+ P TY +LM +K G EG + ++ + +V N +YN +I +C M+D
Sbjct: 221 RLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVD 280
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
+A ++ EMR++ IA ++T+N LI G C+ + + +L+ + + G P+ T+N +I
Sbjct: 281 KAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILI 340
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
+ C + + A+ +++ G+ P +TYN LI + ++A +L L ++M+ I+
Sbjct: 341 NGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIA 400
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
P T+ LI +F R+N EKA + M GL PD ++YS LI L G EA +
Sbjct: 401 PSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKL 460
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQG 479
F S+ + P+S N ++ ++G
Sbjct: 461 FKSLGEMHLQPNSVIYNTMIHGYCKEG 487
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 138/279 (49%)
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G+ P Y L++ K G + + + LV N ++Y+++++ F K +
Sbjct: 188 GLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREG 247
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
++ M+ I PN +N LIS +C V K ++ + E G T+N +I
Sbjct: 248 FQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGG 307
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LCR +F +A+ + ++ + G+ PN +TYNILI C +G + ++RLF ++++ +SP
Sbjct: 308 LCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPT 367
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+ T+N LI + ++ + A M + P +Y+ LI A + ++A +
Sbjct: 368 LVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHS 427
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
ME++G PD YT ++++ L G +EA + K+ E
Sbjct: 428 LMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGE 466
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 162/364 (44%), Gaps = 37/364 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ Y+ +++ K + ++ M P+ + YN LI C G+VD+
Sbjct: 222 LGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDK 281
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ +M G A V TY ILI G C K+ E +++ + + + PN T L++
Sbjct: 282 AFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILIN 341
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G A L + ++ L+ LV NTL+ S + A ++++M +R
Sbjct: 342 GFCDVGKMDTAVRLFNQ-LKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIA 400
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T YT+ ++D F + + LME
Sbjct: 401 PSKVT--YTI--------------LIDAFARLNYTEKACEMHSLME-------------- 430
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
K LV +V +Y+++I C M A+++ + + + + PN V +NT+I G+CK
Sbjct: 431 -----KSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCK 485
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ ++ LL ++ G P+ +F S I LCR ++++A L +M+ G+ P+
Sbjct: 486 EGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSL 545
Query: 363 YNIL 366
Y ++
Sbjct: 546 YKMV 549
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 162/384 (42%), Gaps = 10/384 (2%)
Query: 114 NEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAIL 173
N AT + L H H +L + L Q +L+ RL + + S L
Sbjct: 27 NTATYQGLQH------TSHSISFILNHLLSSGMLPQ---AQSLILRLISGRIPSSLMLQL 77
Query: 174 RKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
+ L + +D V V ++ L I G P +T+ LM L ++
Sbjct: 78 TQAHFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRS 137
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
+ ++ + K ++V + S+ ++I C+ + + + + ++PN+V +
Sbjct: 138 NY-FDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIY 196
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
TLI G CK V + L + G P+ T++ +++ + + M
Sbjct: 197 TTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKR 256
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
G+ PN YN LI C G V ++ ++F +M+ I+ + T+N LI CR K +
Sbjct: 257 SGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGE 316
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A K + +GL P+ +Y+ LI G+ D A + F ++ +G +P T N ++
Sbjct: 317 AVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIA 376
Query: 474 TLVQQGRFEEAHDIVKTSKERGIS 497
+ A D+VK +ER I+
Sbjct: 377 GYSKVENLAGALDLVKEMEERCIA 400
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 105/237 (44%), Gaps = 8/237 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP+ YN +I+ +D A F Q+ P TYN LI G ++ +
Sbjct: 327 VGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAG 386
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL LVK+ME AP+ TYTILID F + + +M++ + P+ T L+H
Sbjct: 387 ALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIH 446
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +A +L E ++ NT+++ + A +L +M G +P
Sbjct: 447 GLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVP 506
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
++F T+ L E +L I G+KP S LYK V+GD
Sbjct: 507 NVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVS--------LYKMVHKVKGD 555
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 222/486 (45%), Gaps = 3/486 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISPS R Y+ ++ + K +D +M KP+ ++Y I I + + DEA
Sbjct: 208 GISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEA 267
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ +ME G P+V T+T++I C+A R+++ V MK + P+ T +L+
Sbjct: 268 YQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDK 327
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYLP 183
D E+ M + +V T ++ L EA A+ +M ++G P
Sbjct: 328 CGDSGDSQSVMEIW-NAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISP 386
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
E +++ ++ + + + + G P T++L + K+G+ ++ +
Sbjct: 387 EQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRY 446
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
H+ +V +V + N V+ + + A + E++D ++P+ +T+ +I K
Sbjct: 447 EHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKA 506
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + ++E G PD NS+ID L + + +A ++ E + P TY
Sbjct: 507 SKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTY 566
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L+ L G V + L ++M P++ T+N ++ + ++ A +SM
Sbjct: 567 NTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTE 626
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G PD SY+ ++ LIK RF+EA + F M++ PD T IL + V+ G +E
Sbjct: 627 KGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKE 685
Query: 484 AHDIVK 489
A VK
Sbjct: 686 ALHTVK 691
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 215/481 (44%), Gaps = 2/481 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+S + YN +I LVKS A ++ M D P TY++L+ + VD
Sbjct: 173 GMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTV 232
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+ +ME G PNVY+YTI I A R E +++L M++ P+ T ++
Sbjct: 233 LWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQV 292
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A ++ + + ++ TLL + ++ + I M GY
Sbjct: 293 LCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDN 352
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ V L L+E + D ++G+ P +Y L+ KA N
Sbjct: 353 IVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFN 412
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
H+ N ++ + I+ + K +A + M+ + I P++ N ++S +
Sbjct: 413 HMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSG 472
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + L + G PD T+ MI C +A + ++A++ S+MVE G P+ + N
Sbjct: 473 RLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALN 532
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI +L G + +LF +++ +I P T+N L+ R K+++ M T
Sbjct: 533 SLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEM-TH 591
Query: 425 GLRPDNF-SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+ P N +Y+ ++ L K+G + A SM + GC PD + N ++ L+++ RFEE
Sbjct: 592 SIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEE 651
Query: 484 A 484
A
Sbjct: 652 A 652
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 133/524 (25%), Positives = 231/524 (44%), Gaps = 53/524 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P N++ID L K + A+ F Q+ + +P TYN L+ G+ R G V E
Sbjct: 523 GCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEV 582
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+++M + PN+ TY ++D V +L M E+ P+ ++ ++++G
Sbjct: 583 MHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYG 642
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL-- 182
+ + +AF + + + +C T+L N + EA +++ Y+
Sbjct: 643 LIKEERFEEAFRMFCQMKKILAPDYATLC-TILPSFVKNGLMKEALHTVKE-----YILK 696
Query: 183 ----PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLL--LMEALYKAGRD 236
+ S+F + ++ + ++ + RG+ + + L L+ L K +
Sbjct: 697 ADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGI--LLNDFFLCPLIRHLCKHKKA 754
Query: 237 VEGDRYLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN------ 289
+E + N FK VS SYN +I N++D A ++ EM+ P+
Sbjct: 755 LEAHQLFNK-FKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNL 813
Query: 290 -----------------------------LVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
VT+NT+ISG K + + +L L+ G
Sbjct: 814 ILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEG 873
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
F P T+ ++D L +A + DA + +EM+E+G PN YNIL+ G+
Sbjct: 874 FSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVC 933
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
++F+KM I+PDI ++ LI + C ++ F +L LGL PD Y+ LI L
Sbjct: 934 QIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGL 993
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
KS R +EA F M++ G P+ YT N ++ L + G+ EA
Sbjct: 994 GKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEA 1037
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/515 (23%), Positives = 221/515 (42%), Gaps = 42/515 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P YN V+ L+K + A+ F QM PD T ++ + G++ EA
Sbjct: 628 GCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMK-KILAPDYATLCTILPSFVKNGLMKEA 686
Query: 65 LRLVKQ-----------------MEGL----------GYAPNVYTYTILIDGF------- 90
L VK+ MEG+ +A N+ + IL++ F
Sbjct: 687 LHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIR 746
Query: 91 --CNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
C K+ E ++ K V + SL+ G+ A +L
Sbjct: 747 HLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGP 806
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
+ N +L + + E + +M +GY T++ ++ LV L + +
Sbjct: 807 DEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLY 866
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ G P TY L++ L KAG+ V+ + N + + N YN++++
Sbjct: 867 YNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIA 926
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+ +I +M ++ I P++ ++ LI C ++ LLE G +PD +
Sbjct: 927 GNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIY 986
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N +ID L ++ R E+A+ +EM + G+ PN TYN LI L G + + ++++++
Sbjct: 987 NLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLI 1046
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
P+++T+NALI+ + + A A + + +G+ +ALI L+ +
Sbjct: 1047 KGWKPNVFTYNALIRGYSVSGSTDNAYAA-YDCVAVGVSLK----TALISGLVDENLINI 1101
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
A+ F M++ GC PD +T NLIL+ + + R EE
Sbjct: 1102 AEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEE 1136
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 211/473 (44%), Gaps = 40/473 (8%)
Query: 17 IDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGY 76
+ ++S + L ++ MS++ +TYN LI+ + + G EA+ + K M G
Sbjct: 155 VQGGLRSAPVALPVMREAGMSLNG-----YTYNGLIYFLVKSGFDAEAMEVYKAMVEDGI 209
Query: 77 APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFE 136
+P+V TY++L+ F + V V +L M+ R V PN V+ ++
Sbjct: 210 SPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPN----------VY-------SYT 252
Query: 137 LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLV 196
+ IR L + EA IL KM D G P+ T + L
Sbjct: 253 ICIRV------------------LGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLC 294
Query: 197 TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVN 256
L++ + KP TY+ L++ +G N + D N+
Sbjct: 295 DAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIV 354
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
SY V+D C+V +D A + EM+++ I+P ++N+LISG K + EL +
Sbjct: 355 SYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHM 414
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
CG P+ +T I+ ++ + A+ M G+ P+ N ++ SL G +
Sbjct: 415 NACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRL 474
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+ R+F +++ +SPD T+ +I+ + +K ++A F M+ G PD + ++L
Sbjct: 475 GMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSL 534
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
I L K G+ +EA + F +++ P + T N +L L ++G+ +E +++
Sbjct: 535 IDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLE 587
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/482 (24%), Positives = 220/482 (45%), Gaps = 8/482 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ YN V+D L K+ ++ A M+ C PD +YN +++G+ + +EA R+
Sbjct: 596 PNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRM 655
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR-VLEIMKERNVCPNEATVRSLVHGVF 126
QM+ + AP+ T ++ F + E V E + + + ++++ SL+ G+
Sbjct: 656 FCQMKKI-LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGIL 714
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
K+ E R L L+ L + A EA + K G ++
Sbjct: 715 NKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTG 774
Query: 187 TFDYTVTCLVTG--LDLNETCGILDTFIKR-GVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+++ + LV +D+ E L T +KR G P TY L+++A+ K+ R E R
Sbjct: 775 SYNSLIRGLVDENLIDIAED---LFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQ 831
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + S +YN +I K +++A ++ + +P T+ L+ G K
Sbjct: 832 AEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKA 891
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ L +LE G KP+ +N +++ A E+ +MVE G+ P+ +Y
Sbjct: 892 GKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSY 951
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+LI +LC G + L F+++ + PD+ +N LI + +IE+A F M
Sbjct: 952 TVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKK 1011
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ P+ ++Y++LI L K+G+ EA Q + + G P+ +T N ++ G +
Sbjct: 1012 KGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDN 1071
Query: 484 AH 485
A+
Sbjct: 1072 AY 1073
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 186/437 (42%), Gaps = 35/437 (8%)
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCN 154
RV ++ +V ++M+++ V N T ++ GV A L E N
Sbjct: 123 RVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYN 182
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
L+Y L + +EA + + M + G P T+ + D++ +L+ R
Sbjct: 183 GLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEAR 242
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
GVKP +Y + + L +A R E + L + +V ++ +VI C + A
Sbjct: 243 GVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDA 302
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
++ +M+ D P+ VT+ TL+ + E+ ++ G+ + ++ +++D
Sbjct: 303 KDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDA 362
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF----------- 383
LC+ R ++AL EM E G+ P +YN LI R+L LF
Sbjct: 363 LCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPN 422
Query: 384 ------------------------QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+ M++ I PD+ NA++ S R ++ A++ F+
Sbjct: 423 GYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFY 482
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+ +G+ PD +Y+ +IK K+ + DEA F M + GC PD N +++TL + G
Sbjct: 483 ELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGG 542
Query: 480 RFEEAHDIVKTSKERGI 496
+ EA + KE I
Sbjct: 543 KGNEAWKLFHQLKEMKI 559
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/494 (22%), Positives = 212/494 (42%), Gaps = 2/494 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P NAV+ +L +S + +A F ++ PD TY ++I + DEA
Sbjct: 453 GIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEA 512
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M G P+V LID + E +++ +KE + P T +L+ G
Sbjct: 513 MNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSG 572
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R + LL + NT+L LS N + A +L M ++G P+
Sbjct: 573 LGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPD 632
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S+++ + L+ E + +K+ + P ++T ++ + K G E +
Sbjct: 633 LSSYNTVMYGLIKEERFEEAFRMF-CQMKKILAPDYATLCTILPSFVKNGLMKEALHTVK 691
Query: 245 -HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
++ K ++ +S++ +++ ++++ E + R I N LI CK
Sbjct: 692 EYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKH 751
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + +L G ++NS+I L + + A D +EM G P+ TY
Sbjct: 752 KKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTY 811
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+++ ++ + LR+ +M T+N +I + ++E+A ++++++
Sbjct: 812 NLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMS 871
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G P +Y L+ L+K+G+ +A+ F M + GC P+ N++L G E
Sbjct: 872 EGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTEN 931
Query: 484 AHDIVKTSKERGIS 497
I + E+GI+
Sbjct: 932 VCQIFEKMVEQGIN 945
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 182/413 (44%), Gaps = 46/413 (11%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+S T YN++I LV N ID+A F +M C PD FTYN+++ + + ++E
Sbjct: 767 LGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEE 826
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
LR+ +M GY TY +I G +KR+ + + + P T L+
Sbjct: 827 MLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLD 886
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + K+V +A + +M + G P
Sbjct: 887 GLLK--------------------AGKMV---------------DAENLFNEMLEYGCKP 911
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + + C I + +++G+ P +Y +L++ L AGR +G Y
Sbjct: 912 NCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYF 971
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + L ++ YN++ID K ++ A + EM+ + I PNL T+N+LI K
Sbjct: 972 RQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKA 1031
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL---DCLSEMVEWGVPPNT 360
+ + ++ LL G+KP+ FT+N++I + ++A DC V GV T
Sbjct: 1032 GKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDC----VAVGVSLKT 1087
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
LI L + + LF +M+ PD +T+N ++ + + +IE+
Sbjct: 1088 A----LISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEE 1136
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 169/394 (42%), Gaps = 3/394 (0%)
Query: 105 IMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV--CNTLLYRLSN 162
+ + R S+VH + P +A EL R+P CN +L +
Sbjct: 62 VHERRRAAGAGTGTESVVHMLRSAPGPAEALELFTA-AARQPTAVHTTESCNYMLELMRA 120
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+ + A + M + TF + + L L + G+ T
Sbjct: 121 HGRVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYT 180
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y L+ L K+G D E + +D + +V +Y++++ F K +D + EM
Sbjct: 181 YNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEME 240
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
R + PN+ ++ I + A + ++L + + G KPD T +I LC A R
Sbjct: 241 ARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLS 300
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
DA D +M P+ +TY L+ GD + ++ M AD + +I ++ A++
Sbjct: 301 DAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVV 360
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+ C++ ++++A F M G+ P+ +SY++LI +K+ FD A + F M G +
Sbjct: 361 DALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPS 420
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
P+ YT L + + G+ +A + K +GI
Sbjct: 421 PNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGI 454
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 123/528 (23%), Positives = 228/528 (43%), Gaps = 38/528 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKP-DRFTYNILIHGICRIGVVDE 63
G P ++ VI +K + L +K + + KP + L+ G C+ G +D
Sbjct: 289 GWVPHEVIFTRVIGVCMKQGKM-LEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDS 347
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L +M G PN TY ++I+ C + + + + MK +++ P V SL+
Sbjct: 348 ALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIR 407
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + P +A +L + + N+LL L SEA +I KM +G P
Sbjct: 408 GYLKARSPEEASKLFDEAVACG-IANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRP 466
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK----------- 232
+++ + D++ G+ +++G+KP TY +LM+ +K
Sbjct: 467 SVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLY 526
Query: 233 ------------------------AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
AGR E L + ++ + +YN +ID F K
Sbjct: 527 DRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKE 586
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
++ A + EM ++PN+ T+ LI+G CK + +++ + G + D +
Sbjct: 587 GSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVY 646
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
++ID CR +A LSE+ E G+ PN + Y+ +I + ++ +L L ++M
Sbjct: 647 CALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMIN 706
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ I D+ + LI + K+ A + + ML G+ PD +YS LI L G+ +
Sbjct: 707 EGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLEN 766
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
A++ M++ P + N ++ ++G +EA + ++G+
Sbjct: 767 AQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGL 814
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 202/476 (42%), Gaps = 36/476 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP+ N++I +K+ S + A F + +V + FTYN L+ +C+ G + EA
Sbjct: 395 ISPTVFNVNSLIRGYLKARSPEEASKLFDE-AVACGIANVFTYNSLLSWLCKEGKMSEAC 453
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ ++M G P+V +Y +I G C + V M E+ + PN T L+ G
Sbjct: 454 SIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGY 513
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
F+ D AF L R CN ++ L SE+ L+K+ G++P
Sbjct: 514 FKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTC 573
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + V +N + K GV P
Sbjct: 574 MTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSP--------------------------- 606
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
NV +Y +I+ FCK N MD A ++ EM+++ I ++ + LI G C+ +
Sbjct: 607 --------NVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGD 658
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ +LL L E G P+K ++SMI + E AL M+ G+P + Y
Sbjct: 659 MVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTT 718
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI L G + + L+ +M A I PD+ T++ LI C ++E A+K M
Sbjct: 719 LISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKC 778
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ P F Y+ LI K G EA + M G PD T ++++ V+ G
Sbjct: 779 MTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 118/520 (22%), Positives = 227/520 (43%), Gaps = 36/520 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGIC-RIGVVDE 63
G+ R Y+ VI+A+ K A ++M P + +I G+C + G + E
Sbjct: 254 GVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVI-GVCMKQGKMLE 312
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+++ +M G NV T L+ G+C + + + M E +CPN T ++
Sbjct: 313 AVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIE 372
Query: 124 GVFRCLDPHKAFEL------------------LIR--FMEREP------LTQKLVC---- 153
+ + KA+E+ LIR R P + + C
Sbjct: 373 WCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIAN 432
Query: 154 ----NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
N+LL L SEA +I KM +G P +++ + D++ G+
Sbjct: 433 VFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFV 492
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+++G+KP TY +LM+ +K G + + + + + + N++I+ CK
Sbjct: 493 EMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAG 552
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+ + +++ P +T+N +I G K+ V+ + + + G P+ FT+
Sbjct: 553 RTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYT 612
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++I+ C+++ + AL + EM G+ + Y LI C GD+ + +L ++Q
Sbjct: 613 NLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEV 672
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+SP+ ++++I F ++ +E A M+ G+ D Y+ LI L+K G+ A
Sbjct: 673 GLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFA 732
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+ + M G PD T ++++ L +G+ E A I++
Sbjct: 733 SELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILE 772
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/496 (22%), Positives = 211/496 (42%), Gaps = 9/496 (1%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P + N + LVK+N I A + +M+ K D T +++I R G ++EA
Sbjct: 185 IVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAE 244
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
++ + G + Y+I+I+ C +L M+++ P+E + + V GV
Sbjct: 245 GWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHE-VIFTRVIGV 303
Query: 126 FRCLDPHKAFELLIRFMER----EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
C+ K E + E +P+ +V TL+ A + KM + G
Sbjct: 304 --CMKQGKMLEAVKVKGEMLSCGKPMNV-VVATTLMKGYCKQGDLDSALELFDKMNENGI 360
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P + T+ + ++++ I + + + P L+ KA E +
Sbjct: 361 CPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASK 420
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ ++NV +YN ++ CK M A I +M + + P++V++N +I GHC
Sbjct: 421 LFDEAVACG-IANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHC 479
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ ++ + V +LE G KP+ T++ ++D + E A M + P+
Sbjct: 480 QQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDF 539
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
T NI+I LC G + S +K+ + P T+N +I F + + A + M
Sbjct: 540 TCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEM 599
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+G+ P+ F+Y+ LI KS D A + M+ G D +++ ++G
Sbjct: 600 CKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDM 659
Query: 482 EEAHDIVKTSKERGIS 497
A ++ +E G+S
Sbjct: 660 VNASQLLSELQEVGLS 675
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 182/444 (40%), Gaps = 29/444 (6%)
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
RL++ L + + + L++ + KR+ + + E+++ P
Sbjct: 140 RLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVP------------ 187
Query: 126 FRCLDPHKAF--ELLIRFMEREP------LTQKLV---CNTL--LYRLS-NNSMASEAAA 171
CL F EL+ M RE + K V C T+ + R S EA
Sbjct: 188 --CLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEG 245
Query: 172 ILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY 231
R+ ++G ++ + + + D G+L +G P + ++
Sbjct: 246 WFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCM 305
Query: 232 KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
K G+ +E + + NV ++ +CK +D A E+ +M + I PN V
Sbjct: 306 KQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNV 365
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
T+ +I CK+ + K E+ + P F NS+I +A E+A E
Sbjct: 366 TYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEA 425
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
V G+ N TYN L+ LC G ++ + +++KM + P + ++N +I C+ +
Sbjct: 426 VACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDM 484
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
+ A F ML GL+P+ +YS L+ K G + A + M P +T N+I
Sbjct: 485 DSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNII 544
Query: 472 LETLVQQGRFEEAHDIVKTSKERG 495
+ L + GR E+ D +K + G
Sbjct: 545 INGLCKAGRTSESQDRLKKLVQEG 568
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 161/345 (46%), Gaps = 1/345 (0%)
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
V N LL ++A + ++ +P + + ++ LV + E + +
Sbjct: 156 VFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKM 215
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+GVK +T +++ A + G+ E + + + + +Y++VI+ CK
Sbjct: 216 ASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDS 275
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
A + REMRD+ P+ V F +I K ++ + ++ +L CG + ++
Sbjct: 276 VAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTL 335
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
+ C+ + AL+ +M E G+ PN +TY ++I C G++ ++ ++ +M+ I
Sbjct: 336 MKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDI 395
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
SP ++ N+LI+ + + E+A K F + G+ + F+Y++L+ L K G+ EA
Sbjct: 396 SPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACS 454
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ M + G P + N ++ QQG + A+ + E+G+
Sbjct: 455 IWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGL 499
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 149/350 (42%), Gaps = 1/350 (0%)
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
V N L L N+M EA + KM +G + +T + + L E G
Sbjct: 191 VMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREA 250
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+GV+ Y +++EA+ K V L + V + + VI K M
Sbjct: 251 KNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKM 310
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
A ++ EM N+V TL+ G+CK ++ EL + E G P+ T+ +
Sbjct: 311 LEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVI 370
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
I+ C+ + A + ++M + P N LIR + +LF + A I
Sbjct: 371 IEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI 430
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
+ +++T+N+L+ C+ K+ +A + M+ G+RP SY+ +I + G D A
Sbjct: 431 A-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANG 489
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
F+ M + G P+ T +++++ ++G E A + + I+ F
Sbjct: 490 VFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDF 539
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 141/314 (44%), Gaps = 3/314 (0%)
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+S F+Y + V +N+ ++ I++ + P + + + L K E
Sbjct: 153 DSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVY 212
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + + + + +++I + ++ A RE +++ + + ++ +I CK
Sbjct: 213 NKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKK 272
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ LL + + G+ P + F +I + + +A+ EM+ G P N +
Sbjct: 273 PDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVA 332
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
L++ C GD+ +L LF KM + I P+ T+ +I+ C+ ++KA + + M
Sbjct: 333 TTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKN 392
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN-PDSYTSNLILETLVQQGRFE 482
+ P F+ ++LI+ +K+ +EA + F E C + +T N +L L ++G+
Sbjct: 393 KDISPTVFNVNSLIRGYLKARSPEEASKLF--DEAVACGIANVFTYNSLLSWLCKEGKMS 450
Query: 483 EAHDIVKTSKERGI 496
EA I + +G+
Sbjct: 451 EACSIWEKMVRKGV 464
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 129/299 (43%), Gaps = 11/299 (3%)
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
ETCG + R + ++ A R +E R L+ R+ +N ++
Sbjct: 113 ETCGKARNLLNRFASDDWGPVPSVVVA-----RLIESSRRLDFESDSRV------FNYLL 161
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
+ + K ++ A + + ++DI P L N +S K+ + + R++ + G K
Sbjct: 162 NSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVK 221
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
D T + MI R + E+A E GV + Y+I+I ++C D +L L
Sbjct: 222 GDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGL 281
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
++M+ P F +I + K+ +A K ML+ G + + L+K K
Sbjct: 282 LREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCK 341
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
G D A + F M +NG P++ T +I+E + G ++A++I K + IS F
Sbjct: 342 QGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVF 400
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 103/236 (43%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP+ Y +I+ KSN++DLA +M + D Y LI G CR G +
Sbjct: 602 IGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVN 661
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +L+ +++ +G +PN Y+ +I GF + + + + M + + +L+
Sbjct: 662 ASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLIS 721
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + A EL + + + + + L++ L N A IL M + P
Sbjct: 722 GLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTP 781
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
++ +T +L E + + + +G+ P +TY +L+ K G G
Sbjct: 782 TVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNLFSG 837
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 210/466 (45%), Gaps = 60/466 (12%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYT 82
+N +D A F ++ P +N ++ + + L L ++ME G PN+
Sbjct: 40 NNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVN 99
Query: 83 YTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFM 142
ILI+ FC + F VL + + PN T+ +L+ G+ CL+ +
Sbjct: 100 CNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGL--CLNG--------KIH 149
Query: 143 EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
++ + KL +A + KM P+ TF V +
Sbjct: 150 DKHCIVGKL---------------KDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVK 194
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
E +L + +G+KP TY LM+ + + + N + + + ++ SY+++I
Sbjct: 195 EAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILI 254
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
+ FCK+ MMD A E+ +EM + I PN+VT+++LI G CK ++ +L+ + + G
Sbjct: 255 NGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQP 314
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P+ T++S++D LC+ H+ ++A+ L++M G+ PN TY ILI+ LC G + + ++
Sbjct: 315 PNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKV 374
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
F+ + + ++YT+ +IQ FC
Sbjct: 375 FEDLLVKGHNLNVYTYTVMIQGFC-----------------------------------D 399
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
G FDEA ME NGC P++ T +I+ +L ++ E A ++
Sbjct: 400 KGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLL 445
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 182/376 (48%), Gaps = 10/376 (2%)
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
D A L R +++ P + N +L L + + +KM RG P +
Sbjct: 42 DVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 101
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV--- 246
+ + +L +K G KP T L++ L G+ + + +
Sbjct: 102 ILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDA 161
Query: 247 ---FKDRLVSNVN----SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
F ++ N+N ++ +++D FCK + A + M + I P +VT+N+L+ G
Sbjct: 162 VDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDG 221
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ +V+K + + + + G PD +++ +I+ C+ ++A++ L EM + PN
Sbjct: 222 YFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPN 281
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+TY+ LI LC G ++ +L+L +M P+I T+++++ + C+ ++++ A
Sbjct: 282 VVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLT 341
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M G++P+ ++Y+ LIK L +SG+ ++A++ F + G N + YT ++++ +G
Sbjct: 342 QMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKG 401
Query: 480 RFEEAHDIVKTSKERG 495
F+EA ++ ++ G
Sbjct: 402 LFDEALTLLSKMEDNG 417
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 169/380 (44%), Gaps = 45/380 (11%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICR--- 57
+ F GI P+ N +I++ + I A+ ++ KP+ T N LI G+C
Sbjct: 88 MEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGK 147
Query: 58 -------IGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
+G + +A+ L +M P+VYT+TIL+DGFC RV E VL +M +
Sbjct: 148 IHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQG 207
Query: 111 VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA 170
+ P T SL+ G F L++ ++A
Sbjct: 208 IKPGVVTYNSLMDGYF-----------LVK------------------------QVNKAK 232
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
+I M G P+ ++ + ++E +L + + P TY L++ L
Sbjct: 233 SIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGL 292
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
K+G+ + ++ + N+ +Y+ ++D CK + +D A + +M+++ I PN+
Sbjct: 293 CKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNM 352
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
T+ LI G C+ ++ R++ LL G + +T+ MI C F++AL LS+
Sbjct: 353 YTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSK 412
Query: 351 MVEWGVPPNTITYNILIRSL 370
M + G PN TY I+I SL
Sbjct: 413 MEDNGCIPNAKTYEIIILSL 432
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 152/332 (45%), Gaps = 18/332 (5%)
Query: 4 LGISPSTRLYNAVIDALVKSNSID-----LAYLK-----FQQMSVDQCKPDRFTYNILIH 53
+G P+T N +I L + I + LK F +M ++ PD +T+ IL+
Sbjct: 126 MGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVD 185
Query: 54 GICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCP 113
G C+ G V EA ++ M G P V TY L+DG+ K+V + + M + V P
Sbjct: 186 GFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSP 245
Query: 114 NEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAIL 173
+ + L++G + +A ELL ++ + + ++L+ L + S A ++
Sbjct: 246 DIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLV 305
Query: 174 RKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
+M DRG P T+ + L ++ +L +G++P TY +L++ L ++
Sbjct: 306 DEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQS 365
Query: 234 GRDVEGDRYLNHVFKDRLVS----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
G+ +E R VF+D LV NV +Y ++I FC + D A + +M D PN
Sbjct: 366 GK-LEDAR---KVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPN 421
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
T+ +I K E +LL ++E F
Sbjct: 422 AKTYEIIILSLFKKDENEMAEKLLCEMIETNF 453
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 152/309 (49%), Gaps = 14/309 (4%)
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS-NVNSY 258
D+++ + + +++ P + ++ +L K+ + YL+ + R + N+ +
Sbjct: 42 DVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKS-KHYHTVLYLSQKMEFRGIKPNLVNC 100
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL----- 313
N++I+ FC++ + A + ++ PN +T NTLI G C + ++H ++
Sbjct: 101 NILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKD 160
Query: 314 ------VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
M+LE PD +TF ++D C+ R ++A + L+ M+ G+ P +TYN L+
Sbjct: 161 AVDLFNKMILE-NINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLM 219
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+ V ++ +F M +SPDI +++ LI FC++ +++A + M +
Sbjct: 220 DGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQII 279
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P+ +YS+LI L KSG+ A + M G P+ T + IL+ L + + + A +
Sbjct: 280 PNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIAL 339
Query: 488 VKTSKERGI 496
+ K +GI
Sbjct: 340 LTQMKNQGI 348
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y++++DAL K++ +D A QM +P+ +TY ILI G+C+ G +++A
Sbjct: 312 GQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDA 371
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ + + G+ NVYTYT++I GFC+ E +L M++ PN T ++
Sbjct: 372 RKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILS 431
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+F+ + A +LL +E + + N L+ + + + + +K G Y
Sbjct: 432 LFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVTGSSPGNSLLCKKQGKAAY 488
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 11/215 (5%)
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
F+T + H + +V L LL+ P FN ++ L ++ + L +M
Sbjct: 31 FSTSTTFH-NNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKME 89
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR----- 407
G+ PN + NILI S C +G + + + K+ P+ T N LI+ C
Sbjct: 90 FRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIH 149
Query: 408 -----MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+ K++ A F M+ + PD ++++ L+ K GR EAK M G
Sbjct: 150 DKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIK 209
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
P T N +++ + +A I T + G+S
Sbjct: 210 PGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVS 244
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 204/474 (43%), Gaps = 5/474 (1%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
RLYN +IDAL++ N + L + M D P+ FTYN+L+ +C+ V A +++ +
Sbjct: 129 RLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDE 188
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M G P+ TY ++ C R+ E VL M P A+ ++V + R
Sbjct: 189 MARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFR 243
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+ F ++ + R + T++ A AIL +M G P TF
Sbjct: 244 MQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTA 303
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
V L +++ + + G P +Y +L+ L G LN + +
Sbjct: 304 LVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHG 363
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
NV +Y+ +ID F K + A I +M PN+V + ++ CK ++ +
Sbjct: 364 CFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAK 423
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
L+ +L P+ TFN++I LC R AL EM G PN TYN LI L
Sbjct: 424 SLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGL 483
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
G+ +L + +MQ+ I + T+N ++ C+ +A M+ G++P+
Sbjct: 484 FREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNA 543
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
F++SA+I A K G A +M C+ + +++ L Q + +A
Sbjct: 544 FTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDA 597
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 218/486 (44%), Gaps = 7/486 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN ++ AL ++N + A +M+ C PD TY ++ +C++ +DEA
Sbjct: 158 GVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEA 217
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ M P +Y ++ C R+ EVF V+ M R + PN T ++V
Sbjct: 218 TEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDA 272
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLP 183
+ + A +L R M T +V T L R L ++ +A + R M G+ P
Sbjct: 273 FCKAGELRMACAILAR-MVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAP 331
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ +++ + L + DL IL++ + G P TY L++ KAG
Sbjct: 332 STVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIW 391
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + + NV Y ++D FCK M ++A + +M + PN VTFNTLI C
Sbjct: 392 NDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDC 451
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V + + + G P+ T+N +I L R DAL ++EM G+ + +TY
Sbjct: 452 RRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTY 511
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N ++ LC ++ KM I P+ +TF+A+I ++C+ ++ A +M
Sbjct: 512 NTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNV 571
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+ + Y+ L+ L + +A L M G P++ T N+++ + + E
Sbjct: 572 VNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIE 631
Query: 484 AHDIVK 489
D ++
Sbjct: 632 PSDFIQ 637
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 169/407 (41%), Gaps = 10/407 (2%)
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME----REPLT 148
A V V L+ M+ R V E + + V R P +A + R + P
Sbjct: 68 AGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTE 127
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
+L N L+ L +M + M G P T++ V L + +L
Sbjct: 128 PRLY-NHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKML 186
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
D ++G P TY ++ L K R E L + SYN ++ C+
Sbjct: 187 DEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVL-----AAMPPVAASYNAIVLALCRE 241
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
M + +M R + PN++T+ T++ CK E+ +L ++ G P+ TF
Sbjct: 242 FRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTF 301
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+++ L R DALD MV G P+T++YNILIR LC++GD+ + + M+
Sbjct: 302 TALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQ 361
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
P++ T++ LI F + + A + M G +P+ Y+ ++ K F++
Sbjct: 362 HGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQ 421
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
AK M C P++ T N ++ +L R A + + G
Sbjct: 422 AKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG 468
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 109/490 (22%), Positives = 197/490 (40%), Gaps = 43/490 (8%)
Query: 15 AVIDALVKSNSIDLAYLKFQQMSVDQ--CKP-DRFTYNILIHGICRIGVVDEALRLVKQM 71
A + A ++ + D A F + D +P + YN LI + R +V + + M
Sbjct: 95 AAVGAFARAGAPDRALKTFYRAVHDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNM 154
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
G PNV+TY +L+ C RV ++L+ M + P++ T ++V
Sbjct: 155 RKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIV--------- 205
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
++L +L A+E A + P +++++
Sbjct: 206 -----------------------SVLCKLDRLDEATEVLAAMP--------PVAASYNAI 234
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
V L + E ++ + RG++P TY +++A KAG L +
Sbjct: 235 VLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGC 294
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
NV ++ ++ + A ++ R M AP+ V++N LI G C ++
Sbjct: 295 TPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASS 354
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
+L + + G P+ T++++ID +A A+ ++M G PN + Y ++ C
Sbjct: 355 ILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFC 414
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
++ L KM + P+ TFN LI+S C ++ +A F M G P+
Sbjct: 415 KKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGR 474
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
+Y+ LI L + G +A M+ +G T N ++ L Q EA V
Sbjct: 475 TYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKM 534
Query: 492 KERGISFKSF 501
+GI +F
Sbjct: 535 IVQGIQPNAF 544
>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 811
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 213/461 (46%), Gaps = 31/461 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ ++++ ID VKS + A + +++M P+ TY ILI G+C+ G + EA
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ Q+ G P++ TY+ LIDGFC + F + E M + P+ LV G
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A ++ + + +V N+L+ + EA + R MG G P+
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLL-LMEALYKAGRDVEGDRYL 243
+TF T V+ ++ D F K +KP L LM+
Sbjct: 531 VATF--TTVMRVSIME--------DAFCKH-MKPTIGLQLFDLMQ--------------- 564
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
++++ +++ N+VI K + ++ A++ + + + P++VT+NT+I G+C
Sbjct: 565 ----RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 620
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + + +L F P+ T +I LC+ + + A+ S M E G PN +TY
Sbjct: 621 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 680
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
L+ D+ S +LF++MQ ISP I +++ +I C+ ++++A F +
Sbjct: 681 GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 740
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
L PD +Y+ LI+ K GR EA + M +NG PD
Sbjct: 741 AKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 207/452 (45%), Gaps = 8/452 (1%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P+ T+ LI+G C+ G +D A L K ME G P++ Y+ LIDG+ A + ++
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LS 161
+ V + S + + D A ++ + M + ++ +V T+L + L
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATA-SVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
+ EA + ++ RG P T+ + +L + + IK G P
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
Y +L++ L K G + R+ + + NV +N +ID +C++N D A ++ R M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 282 RDRDIAPNLVTFNTLI------SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
I P++ TF T++ CK + +L ++ D N +I L
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 582
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
+ HR EDA + ++E + P+ +TYN +I C++ + + R+F+ ++ P+
Sbjct: 583 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 642
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
T LI C+ N ++ A + F M G +P+ +Y L+ KS + + + F
Sbjct: 643 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 702
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
M++ G +P + ++I++ L ++GR +EA +I
Sbjct: 703 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 734
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 216/482 (44%), Gaps = 20/482 (4%)
Query: 14 NAVIDALVKSNSID---LAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
+ V D ++ + D L ++ + + D CK L+ CR G+VD+AL +
Sbjct: 119 DKVFDEMITNRGKDFNVLGSIRDRSLDADVCK-------FLMECCCRYGMVDKALEIFVY 171
Query: 71 MEGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
LG P Y +L + + RV + + + + P+ + V C
Sbjct: 172 STQLGVVIPQDSVYRML-NSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK 230
Query: 130 -DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+ KA + MER + CN +L LS + + A+ +L + D G P TF
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQI-EVASRLLSLVLDCGPAPNVVTF 289
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ +++ + +RG++P Y L++ +KAG G + +
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+ +V ++ ID + K + A+ + + M + I+PN+VT+ LI G C+D +++
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+ +L+ G +P T++S+ID C+ +M++ G PP+ + Y +L+
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
L G + ++R KM I ++ FN+LI +CR+N+ ++A K F M G++P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 429 DNFSYSALIKALIKSGRFDE------AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
D +++ +++ I F + Q F M++N + D N+++ L + R E
Sbjct: 530 DVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 589
Query: 483 EA 484
+A
Sbjct: 590 DA 591
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 113/501 (22%), Positives = 224/501 (44%), Gaps = 10/501 (1%)
Query: 5 GISPS-TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQC-KPDRFTYNILIHGICRIGVVD 62
GI PS + V+DAL + A L F ++ +++ + + N ++ G+ + ++
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKA-LDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIE 268
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A RL+ + G APNV T+ LI+GFC + F + ++M++R + P+ +L+
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G F+ +L + + + +V ++ + + + A+ + ++M +G
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T+ + L + E G+ +KRG++P TY L++ K G G
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ K +V Y +++D K +M A +M + I N+V FN+LI G C+
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNS------MIDCLCRAHRFEDALDCLSEMVEWGV 356
+ ++ ++ G KPD TF + M D C+ + L M +
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKI 568
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
+ N++I L + + + F + ++ PDI T+N +I +C + ++++AE+
Sbjct: 569 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 628
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
F + P+ + + LI L K+ D A + F M + G P++ T +++
Sbjct: 629 IFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFS 688
Query: 477 QQGRFEEAHDIVKTSKERGIS 497
+ E + + + +E+GIS
Sbjct: 689 KSVDIEGSFKLFEEMQEKGIS 709
>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
Length = 697
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 117/502 (23%), Positives = 220/502 (43%), Gaps = 43/502 (8%)
Query: 5 GISPSTRLYNAVIDALVK---SNSIDL--AYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
G SP+ Y +I+ K +ID+ A L ++M P TY + IHG+CR+G
Sbjct: 180 GPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVG 239
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+++A ++ + N+Y Y LI GFC R E ++LE MK+ + P+ +
Sbjct: 240 SIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYS 299
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGD 178
LV+ D L I+ ME LVC T +L L + ++ ++
Sbjct: 300 ILVNAFCTEGDIESGMNL-IQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSA 358
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
+GY + ++ + + G ++ ++ K G+ P + Y+ L+ + G E
Sbjct: 359 KGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKE 418
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + +D L ++ + N ++D +C + A +M+D++I PN T++ +I+
Sbjct: 419 ALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIIN 478
Query: 299 GHCKDAEVHKTRELLVMLLE------------------------------------CGFK 322
CK V K E+L ++ + G K
Sbjct: 479 WLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCK 538
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
PD T ++D + + AL+ EM E G+ + + +I C +G+V R+ +
Sbjct: 539 PDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSM 598
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
++KM+ + ++P++ T+ L+ FC++ +++ A M + PD +Y+ALI +
Sbjct: 599 YKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQR 658
Query: 443 SGRFDEAKQTFLSMEQNGCNPD 464
D A + F M++ G PD
Sbjct: 659 IENIDRAYEVFDEMKKKGTLPD 680
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/474 (22%), Positives = 211/474 (44%), Gaps = 48/474 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P+ Y I L + SI+ A+ K Q + + + YN LI G C+ G DEA
Sbjct: 220 GENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEA 279
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L+++M+ G +P++Y+Y+IL++ FC + +++ M+ N P S++ G
Sbjct: 280 LKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMG 339
Query: 125 ------VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
V CL+ EL + + + ++ +TL++ A ++ +M
Sbjct: 340 LRTKGLVNDCLNFFH--ELSAKGYKHDLISY----STLIHGFLKGHNVKSANNLVHEMRK 393
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G +P+ + + L E T ++ G++P T +++ G+ E
Sbjct: 394 NGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEE 453
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
Y+N + ++ N +Y+++I+ CK +++A E+ M +I P+++ + T++
Sbjct: 454 ALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMD 513
Query: 299 GHCKD-AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G+ K K +L + + G KPD T ++D + + AL+ EM E G+
Sbjct: 514 GYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLS 573
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP------------------------ 393
+ + +I C +G+V R+ +++KM+ + ++P
Sbjct: 574 RDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATML 633
Query: 394 -----------DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
D+ T+ ALI + R+ I++A + F M G PD+ +Y L
Sbjct: 634 IDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAYLTL 687
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/479 (22%), Positives = 199/479 (41%), Gaps = 46/479 (9%)
Query: 63 EALR-LVKQMEGLGYAPNVYTYTILIDGFCNAKR-----VAEVFRVLEIMKERNVCPNEA 116
EA+R L ++ G +PNVYTYTI+I+ +C + + + +LE M+E+ P
Sbjct: 167 EAVRSLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVV 226
Query: 117 TVRSLVHGVFRCLDPHKAFELLIRF-MEREPLTQKLVC-NTLLYRLSNNSMASEAAAILR 174
T +HG+ R A+ + +PL + C N L+ EA +L
Sbjct: 227 TYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLN--IYCYNALIQGFCQKGRPDEALKLLE 284
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
+M D G P+ ++ V T D+ ++ KP ++ L G
Sbjct: 285 EMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKG 344
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
+ + + + ++ SY+ +I F K + + A + EMR + P+ + +
Sbjct: 345 LVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYI 404
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
+LI +C+ + + + +L+ G +PD T N ++D C +FE+AL +++M +
Sbjct: 405 SLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQ 464
Query: 355 GVPPNTITYNILIRSLCAIGDVARSL---------------------------------- 380
+ PN+ TY+++I LC V ++
Sbjct: 465 NILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMK 524
Query: 381 --RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+L++KM PD T L+ F + K+ KA F M GL D F+++A+I
Sbjct: 525 AWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIID 584
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ G A + M++N P+ T +++ + R + A ++ K ++
Sbjct: 585 GYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVT 643
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 156/343 (45%), Gaps = 9/343 (2%)
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLV-------TGLDLNETC 205
CN LL L+ ++ + + G P + + YT+ +D+ +
Sbjct: 153 CNFLLKCLAEGDKLEAVRSLFDDLKNSG--PSPNVYTYTIMINFYCKERHGQNIDMEQAS 210
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
IL+ ++G P TY + + L + G + + + N+ YN +I F
Sbjct: 211 LILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGF 270
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C+ D A ++ EM+D I+P++ +++ L++ C + ++ L+ + C KP
Sbjct: 271 CQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPL 330
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
S++ L D L+ E+ G + I+Y+ LI +V + L +
Sbjct: 331 VCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHE 390
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M+ + + PD + +LI+ +CR +++A K F++ML GL+PD + + ++ G+
Sbjct: 391 MRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQ 450
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
F+EA M+ P+SYT ++I+ L + E+A +++
Sbjct: 451 FEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVL 493
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 158/355 (44%), Gaps = 5/355 (1%)
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
V + L+ ++N M ++A + + G S+ ++ + CL G L + D
Sbjct: 117 VLSLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDL 176
Query: 212 IKRGVKPRFSTYLLLMEALYKA--GRDVEGDR---YLNHVFKDRLVSNVNSYNMVIDCFC 266
G P TY +++ K G++++ ++ L + + V +Y + I C
Sbjct: 177 KNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLC 236
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
+V ++ A +++R + N+ +N LI G C+ + +LL + + G PD +
Sbjct: 237 RVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIY 296
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
+++ +++ C E ++ + EM P + ++ L G V L F ++
Sbjct: 297 SYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHEL 356
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
A D+ +++ LI F + + ++ A M GL PD Y +LI+ + G
Sbjct: 357 SAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCL 416
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
EA + F +M Q+G PD T N I++ +G+FEEA + K++ I S+
Sbjct: 417 KEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSY 471
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P ++D K + A F++M+ + D F + +I G CR+G V
Sbjct: 535 LGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKR 594
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + K+M+ PNV TYT L+DGFC KR+ +++ MK +V P+ T +L+
Sbjct: 595 AWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIA 654
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTL 156
G R + +A+E+ ++ L + TL
Sbjct: 655 GYQRIENIDRAYEVFDEMKKKGTLPDHIAYLTL 687
>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
Length = 506
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 112/460 (24%), Positives = 210/460 (45%), Gaps = 49/460 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P+ Y +I + +DL + + + + +N L+ G+C D+A+
Sbjct: 86 VTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAM 145
Query: 66 RLV-KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE--RNVCPNEATVRSLV 122
+V + M LG PNV+++TI++ G C+ R E +L +M + PN + ++
Sbjct: 146 DIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVT 205
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + DP KA+ A R+M DR L
Sbjct: 206 DGLLKGGDPDKAY-----------------------------------ATYREMLDRRIL 230
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T+ + L G +++ + D +K GV P TY L+ +G+ E ++
Sbjct: 231 PNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKF 290
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + + + NV +Y+ +D CK A +I M R + P++ T+++L+ G+
Sbjct: 291 LEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAI 350
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + L ++++ +PD + FN++I + + ++A+ S+M G+ PN +T
Sbjct: 351 EGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVT 410
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN LI C I + +L LFQ+M ++ +SP+ T+N ++Q R + A++ + ++
Sbjct: 411 YNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTAKEFYVQII 470
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
G K LI+ G +E FLSME N C+
Sbjct: 471 KSGK-----------KDLIEQGLLEELDDLFLSMEDNDCS 499
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 183/423 (43%), Gaps = 42/423 (9%)
Query: 78 PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK--AF 135
P V+TY ILI C+A R+ F L + ++ L+ G+ C D A
Sbjct: 88 PTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGL--CADKRTDDAM 145
Query: 136 ELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
++++R M + +T++ + L + + + EA +L M D G
Sbjct: 146 DIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDG-------------- 191
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
G P +Y + + L K G + + R++ N
Sbjct: 192 -------------------GGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPN 232
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
V +Y+ +I CK MD+A E+ M + PN T+ +L+ G C ++ + + L
Sbjct: 233 VVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLE 292
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
+ G +P+ T++S +D LC+ R +A MV+ G+ P+ TY+ L+ G
Sbjct: 293 KMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEG 352
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
+ LF M + PD Y FN LI + + K+++A F M GL+P+ +Y+
Sbjct: 353 ALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYN 412
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD----IVKT 490
LI K R + A F M NG +P+ T N++L+ L + GR A + I+K+
Sbjct: 413 TLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTAKEFYVQIIKS 472
Query: 491 SKE 493
K+
Sbjct: 473 GKK 475
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 142/293 (48%), Gaps = 2/293 (0%)
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR--LVSNVNSYNMVIDC 264
+L + G P ++ ++++ L R E L+ + D + NV SY+ V D
Sbjct: 148 VLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDG 207
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
K D+A REM DR I PN+VT++++I+ CK + K E+ +++ G P+
Sbjct: 208 LLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPN 267
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
FT+ S++ C + + +A+ L +M GV PN +TY+ + LC G + ++F
Sbjct: 268 CFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFY 327
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
M + PDI T+++L+ + + + F M+ ++PD++ ++ LI A K G
Sbjct: 328 SMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQG 387
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ DEA F M G P+ T N ++ + R E A + + G+S
Sbjct: 388 KVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVS 440
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 139/318 (43%), Gaps = 35/318 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y+ V D L+K D AY +++M + P+ TY+ +I +C+ +D+A
Sbjct: 193 GCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKA 252
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + +M G PN +TYT L+ GFC++ ++ E + LE M V PN T S
Sbjct: 253 MEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSS---- 308
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
FM+ L N +EA I M RG P+
Sbjct: 309 ----------------FMD---------------YLCKNGRCTEARKIFYSMVKRGLKPD 337
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+T+ + L E G+ D ++ ++P + L+ A K G+ E +
Sbjct: 338 ITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFS 397
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L N +YN +I+ +CK+ M+ A + +EM ++PN +T+N ++ G +
Sbjct: 398 KMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTG 457
Query: 305 EVHKTRELLVMLLECGFK 322
+E V +++ G K
Sbjct: 458 RTGTAKEFYVQIIKSGKK 475
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
+ P + T+ LI C + L +++ GF+ + FN ++ LC R +DA+
Sbjct: 86 VTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAM 145
Query: 346 D-CLSEMVEWGVPPNTITYNILIRSLC--------------------------------- 371
D L M E G PN ++ I+++ LC
Sbjct: 146 DIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVT 205
Query: 372 ----AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
GD ++ +++M RI P++ T++++I + C+ ++KA + M+ G+
Sbjct: 206 DGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVT 265
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P+ F+Y++L+ SG+ EA + M NG P+ T + ++ L + GR EA I
Sbjct: 266 PNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKI 325
Query: 488 VKTSKERGI 496
+ +RG+
Sbjct: 326 FYSMVKRGL 334
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 17/164 (10%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSL-CAIGDVAR-----SLRLFQKMQ---ADRIS 392
EDALD E++ G+ IRSL A+ DVAR ++ F +M A ++
Sbjct: 35 EDALDVFDELLRRGI-------GAPIRSLNGALADVARDNPAAAVSRFNRMARAGASMVT 87
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
P ++T+ LI C +++ A ++ G R + ++ L+K L R D+A
Sbjct: 88 PTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDI 147
Query: 453 FL-SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
L M + GC P+ ++ +IL+ L + R +EA +++ + G
Sbjct: 148 VLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDG 191
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 3/182 (1%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P T+ +I C C A R + L +V+ G I +N L++ LCA ++ +
Sbjct: 88 PTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDI 147
Query: 383 -FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML--TLGLRPDNFSYSALIKA 439
+ M P++++ +++ C N+ ++A + M G P+ SYS +
Sbjct: 148 VLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDG 207
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
L+K G D+A T+ M P+ T + I+ L + ++A ++ + G++
Sbjct: 208 LLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPN 267
Query: 500 SF 501
F
Sbjct: 268 CF 269
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 134/516 (25%), Positives = 238/516 (46%), Gaps = 36/516 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ----CKPDRFTYNILIHGICRIGV 60
G++P+ +NA I AL K+ + AY FQ M D +PD+ T+++++ G C G
Sbjct: 237 GLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGF 296
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VDEA LV M G+ V +Y + G RV E +L M + PN T
Sbjct: 297 VDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNI 356
Query: 121 LVHGVFRCLDPHKAFEL--LIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMG 177
+V G+ + KAF+ + F+ ++ +V T LL+ + + A IL +M
Sbjct: 357 IVSGLCK---EGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMA 413
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK----------------PRFS 221
+G P S T++ + L E +L+ ++G R
Sbjct: 414 QKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLD 473
Query: 222 TYLLLMEALYKAGRDVEG---DRYLNHV----FKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
+ +++ +++ G G + +L+ V R + + +Y+++I CK D A
Sbjct: 474 VAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEA 533
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ EM +DI+P+ V ++T I G+CK + ++L + + G P T+N +I
Sbjct: 534 KKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRG 593
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
H+ E+ + +SEM E G+ PN +TYN LI+S C G V +++ L +M + + P+
Sbjct: 594 FEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPN 653
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSML-TLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
I +F+ LI+++C++ A+ F + L T G + Y + L G++ EAK
Sbjct: 654 ITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQK--EVLYCLMCTELTTYGKWIEAKNIL 711
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+ + S+ I+ L + G + AH ++K
Sbjct: 712 EMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLK 747
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 137/553 (24%), Positives = 228/553 (41%), Gaps = 107/553 (19%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+T +YN +I A ++ + +DL ++ + + +PD FT N+L+ +C G ++ A R+
Sbjct: 108 PTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRV 167
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
M A N +++ IL G+C A R + +VL+ M N+
Sbjct: 168 FDAMP----ARNEFSFGILARGYCRAGRSIDALKVLDGMPSMNL---------------- 207
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+VCNT++ + EA ++ +M +G P T
Sbjct: 208 -----------------------VVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVT 244
Query: 188 FDYTVTCLVTG---LDLNETCGILDTFIKRGV-KPRFSTYLLLMEALYKAGRDVEGDRYL 243
F+ ++ L LD + + G+ +P T+ +++ AG V+ R L
Sbjct: 245 FNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGF-VDEARVL 303
Query: 244 NHVFK-DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + + V SYN + + + A E+ REM I PN T+N ++SG CK
Sbjct: 304 VDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCK 363
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + R + + PD T+ S++ C A L EM + G PN+ T
Sbjct: 364 EGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFT 423
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA-------- 414
YN+L++SL G + RL ++M S D N +I CR ++++ A
Sbjct: 424 YNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMW 483
Query: 415 EKAFFSMLTLG---------------LRPDNFSYSALIKALIKSGRFDEAKQTFLS---- 455
E+ ++ LG PD +YS LI AL K GRFDEAK+ L
Sbjct: 484 EEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVK 543
Query: 456 -------------------------------MEQNGCNPDSYTSNLILETLVQQGRFEEA 484
ME+ GCNP + T NL++ ++ + EE
Sbjct: 544 DISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEI 603
Query: 485 HDIVKTSKERGIS 497
++ KE+GIS
Sbjct: 604 MKLMSEMKEKGIS 616
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/479 (22%), Positives = 201/479 (41%), Gaps = 61/479 (12%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN + LV++ + A ++M+ + +P+ +TYNI++ G+C+ G +A R+ +
Sbjct: 319 YNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIR 378
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
+P+V TYT L+ +C+ +A R+L+ M ++ PN T L+ ++R
Sbjct: 379 SGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTT 438
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNS-----------MASEAAAILRKMGD--- 178
+A LL R E+ CN ++ L NS M E + L ++G+
Sbjct: 439 EAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFL 498
Query: 179 ---------RGYLPESSTFDYTVTCL---------------VTGLDLNETCGILDTFI-- 212
+ LP+ T+ ++ L + D++ I DTFI
Sbjct: 499 SVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHG 558
Query: 213 ------------------KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
K+G P TY LL+ + + E + ++ + + + N
Sbjct: 559 YCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPN 618
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL- 313
V +YN +I FC+ M+++A + EM ++ PN+ +F+ LI +CK + + +
Sbjct: 619 VMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFD 678
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
L CG K + + M L ++ +A + L +E V + Y +I LC +
Sbjct: 679 AALRTCGQK--EVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEV 736
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G+V + L + + A R D F +I + K + + M+ + R D
Sbjct: 737 GEVDHAHSLLKLLIAKRHLFDPAAFMPVIDALGDRGKKQDVDMLSAKMMEMADRNDGLG 795
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 155/341 (45%), Gaps = 49/341 (14%)
Query: 199 LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY 258
LDL E + + G +P T LL++AL AGR R VF N S+
Sbjct: 126 LDLVEA--LYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQR----VFDAMPARNEFSF 179
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
++ +C+ A ++ M + NLV NT+++G CK+ V + L+ +
Sbjct: 180 GILARGYCRAGRSIDALKVLDGMP----SMNLVVCNTVVAGFCKEGLVEEAERLVERMRV 235
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE-W--GVP-PNTITYNILIRSLCAIG 374
G P+ TFN+ I LC+A R DA +M E W G+P P+ +T+++++ C G
Sbjct: 236 QGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAG 295
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
V + L M+ + ++N + R ++ +A++ M G++P++++Y+
Sbjct: 296 FVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYN 355
Query: 435 ALIKALIKSGRFDEAKQ---------------TFLS--------------------MEQN 459
++ L K G+ +A++ T+ S M Q
Sbjct: 356 IIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQK 415
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
GC P+S+T N++L++L + GR EA +++ E+G S +
Sbjct: 416 GCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDT 456
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 414 AEKAFFSM--LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
A AF S+ LT P Y+ LI A ++ R D + + + +G PD +T NL+
Sbjct: 92 AIPAFRSLRALTSAPPPTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLL 151
Query: 472 LETLVQQGRFEEAHDIVKTSKER 494
L+ L GR E A + R
Sbjct: 152 LQALCDAGRMELAQRVFDAMPAR 174
>gi|357142282|ref|XP_003572519.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 706
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/487 (22%), Positives = 231/487 (47%), Gaps = 12/487 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ + +P++ YN ++ L + A ++M+ + PD T+ +LIH C+ G+
Sbjct: 181 VASMPPAPNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGL 240
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VD A+ ++ +M G P Y +I F RV E + M + P+ + +
Sbjct: 241 VDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMPCK---PDIFSYNA 297
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ R A EL+ + ++ ++ NT++ L + + A ++ +M G
Sbjct: 298 VLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYG 357
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P++ T+ + + + L+ P Y +++ L + G+ +
Sbjct: 358 RKPDNFTYSALINAFSEQGCVEDA---LELLRSMPCSPNTVCYKSVLKGLCRDGQWEDVG 414
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + ++ + + ++IDC C+ ++D E+ +E+ + +P++V + +L++G
Sbjct: 415 QLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGF 474
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
AE + + L + KP+ T+N ++ LC+ +EDA + EMV PPN
Sbjct: 475 ---AEYGRVDDSLKLFKSMTCKPNTVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNE 531
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+T++ILI SLC G V ++ +F+KMQ +P++ ++ L ++ A K +
Sbjct: 532 MTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEKGCVDNALKLLNN 591
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M + D YS+ +K L ++ +++A + + M + C PD T ++I+ L QQG
Sbjct: 592 M---SCKADTICYSSALKGLCRAELWEDAGELIVEMFRKDCPPDEVTFSIIITNLCQQGF 648
Query: 481 FEEAHDI 487
E A ++
Sbjct: 649 VEYATEV 655
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/473 (22%), Positives = 195/473 (41%), Gaps = 42/473 (8%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D +N L+ G CR G + +A R+++ + G A +V TY LI G+C R+ + ++
Sbjct: 123 DAVDHNTLVAGYCRAGRLADAERMLRSLAASGAA-DVVTYNTLIAGYCRGGRLEDARLLV 181
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
M PN +L+ G+ A EL+ + L L++ +
Sbjct: 182 ASMPPA---PNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQS 238
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
+ A IL +M G P + ++ ++C +L L F KP +Y
Sbjct: 239 GLVDRAMGILDRMSKCGCTPGAIVYNEIISCFA---ELGRVKEALHLFSCMPCKPDIFSY 295
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM-- 281
+++ L +A R + + + + + ++N VI C ++D A E+ +M
Sbjct: 296 NAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPK 355
Query: 282 ------------------------------RDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
R +PN V + +++ G C+D + +
Sbjct: 356 YGRKPDNFTYSALINAFSEQGCVEDALELLRSMPCSPNTVCYKSVLKGLCRDGQWEDVGQ 415
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
L+ ++ PD+ F +IDCLC+ + L+ L E+ +G P+ + Y L+
Sbjct: 416 LIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFA 475
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
G V SL+LF+ M P+ T+N ++ C++ E A K M+ P+
Sbjct: 476 EYGRVDDSLKLFKSMTC---KPNTVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEM 532
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
++S LI +L + G + A F M+ GC P+ + + L ++G + A
Sbjct: 533 TFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEKGCVDNA 585
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 197/455 (43%), Gaps = 52/455 (11%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P R N +H R+G +D AL+LV M P V T+LI C A R+A+
Sbjct: 59 PRRGAANDRLHHFIRLGDLDAALQLVGSMS---EPPAVVPCTLLIKKLCAAGRLADA--- 112
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
GV R + A + NTL+
Sbjct: 113 --------------------EGVLRASEAADAVDH----------------NTLVAGYCR 136
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
++A +LR + G + T++ + G L + ++ + P
Sbjct: 137 AGRLADAERMLRSLAASGAA-DVVTYNTLIAGYCRGGRLEDARLLVASMPP---APNSYA 192
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y L++ L A + + + + + ++ + ++ M+I FC+ ++DRA I M
Sbjct: 193 YNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRAMGILDRMS 252
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
P + +N +IS AE+ + +E L + KPD F++N+++ LCRA R+E
Sbjct: 253 KCGCTPGAIVYNEIISCF---AELGRVKEALHLFSCMPCKPDIFSYNAVLKGLCRAERWE 309
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
DA + ++EMV P+ +T+N +I LC G V +L + +M PD +T++ALI
Sbjct: 310 DAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALI 369
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+F +E A + SM P+ Y +++K L + G++++ Q M +N C
Sbjct: 370 NAFSEQGCVEDALELLRSM---PCSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCA 426
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
PD LI++ L Q+G + ++++ G S
Sbjct: 427 PDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCS 461
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 190/421 (45%), Gaps = 11/421 (2%)
Query: 2 SFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
S + P YNAV+ L ++ + A +M C PD T+N +I +C G+V
Sbjct: 284 SCMPCKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLV 343
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
D AL +V QM G P+ +TY+ LI+ F V + LE+++ PN +S+
Sbjct: 344 DCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDA---LELLRSMPCSPNTVCYKSV 400
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ G+ R +L+ + + ++V ++ L + +L+++ + G
Sbjct: 401 LKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGC 460
Query: 182 LPESSTFDYTVTCLVTGL-DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ + T L+ G + L F KP TY ++ L K +
Sbjct: 461 SPDVVMY----TSLLNGFAEYGRVDDSLKLFKSMTCKPNTVTYNYVLMGLCKVELWEDAG 516
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ ++ + N +++++I C+ +++ A ++ +M+ PN++ ++TL +G
Sbjct: 517 KLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGL 576
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ V +LL + K D ++S + LCRA +EDA + + EM PP+
Sbjct: 577 SEKGCVDNALKLLNNM---SCKADTICYSSALKGLCRAELWEDAGELIVEMFRKDCPPDE 633
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+T++I+I +LC G V + + M +P+I +++LI F +E A K S
Sbjct: 634 VTFSIIITNLCQQGFVEYATEVSDLMLKYECTPNIVIYSSLINGFSEHGHLEDALKLLRS 693
Query: 421 M 421
M
Sbjct: 694 M 694
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 215/455 (47%), Gaps = 4/455 (0%)
Query: 13 YNAVIDALVKSNSIDLAYLK--FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
Y+ +I +LV+SN ID L+ + ++ D+ + D N +I G + G ++A+ +
Sbjct: 222 YSLIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGM 281
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
++ G +P T +I ++ R+ E + E MK+ + P L+ G +
Sbjct: 282 VQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKA-G 340
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAI-LRKMGDRGYLPESSTFD 189
K E ++ MER ++ +LL +N+ E+A I L++M +P S F
Sbjct: 341 MLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFS 400
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
+ + ++ +L GV+P Y ++++ K + + +
Sbjct: 401 RILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSE 460
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
+ + ++N +IDC CK + +RA E+ EM ++ +P + TFN +I+ +
Sbjct: 461 GIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDV 520
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
+ L+ + G P+ T+ ++ID ++ RF DA++CL +M G+ P++ YN LI +
Sbjct: 521 KTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINA 580
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
G +++ F+ M+AD + P + N+LI +F + +A M L+PD
Sbjct: 581 YAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPD 640
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+Y+ L+KALI+ +F++ + M GC PD
Sbjct: 641 VVTYTTLMKALIRVDKFNKVPSVYEEMILAGCTPD 675
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 118/479 (24%), Positives = 217/479 (45%), Gaps = 50/479 (10%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
LY+ +I AL +S + A+L QQ ++ TYN LI+ R +++A+ L+ +M
Sbjct: 156 LYSILIHALGRSEKLYEAFLLSQQQALSP-----LTYNALINACARNNDLEKAINLISRM 210
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPN-EATVR---SLVHGVFR 127
GY + Y+++I + R+ +L+ + C E V+ ++ G +
Sbjct: 211 RQDGYPSDFVNYSLIIQSLVRSNRIDSP--ILQKLYSEIQCDKLELDVQLSNDIIVGFAK 268
Query: 128 CLDPHKAFELL--IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
DP+KA E L ++ P T L+ A++ +GD G + E+
Sbjct: 269 AGDPNKAMEFLGMVQASGLSPRTATLI------------------AVISALGDSGRIIEA 310
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
I + G+KP+ Y L++ KAG + + ++
Sbjct: 311 E-------------------AIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSE 351
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + + + +Y+++ID + + A + +EM +I PN F+ +++ + E
Sbjct: 352 MERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGE 411
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
K+ ++L + G +PD+ +N MID + + A+D +M+ G+ P+T+T+N
Sbjct: 412 WQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNT 471
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI C R+ LF++M SP + TFN +I SF + + + +M +LG
Sbjct: 472 LIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLG 531
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
L P+ +Y+ LI KSGRF +A + M+ G P S N ++ Q+G E+A
Sbjct: 532 LLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQA 590
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 182/436 (41%), Gaps = 35/436 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP T AVI AL S I A F++M + KP YN L+ G + G++ +A
Sbjct: 286 GLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDA 345
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+V +ME G +P+ TY++LID + NA R VL+ M+ N+ PN ++
Sbjct: 346 EFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILAS 405
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ K+F+ +L++M + G P+
Sbjct: 406 YRDRGEWQKSFQ-----------------------------------VLKEMKNSGVRPD 430
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + L+ D + G++P T+ L++ KA +
Sbjct: 431 RHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFE 490
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + V ++N++I+ F + D + MR + PN+VT+ TLI + K
Sbjct: 491 EMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSG 550
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E L + G KP +N++I+ + E A++ M + P+ + N
Sbjct: 551 RFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALN 610
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI + A + + + M+ + + PD+ T+ L+++ R++K K + M+
Sbjct: 611 SLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKVPSVYEEMILA 670
Query: 425 GLRPDNFSYSALIKAL 440
G PD + + L AL
Sbjct: 671 GCTPDRKARAMLRSAL 686
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 190/425 (44%), Gaps = 17/425 (4%)
Query: 83 YTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFM 142
Y+ILI ++++ E F + +++ + P T +L++ R D KA L+ R M
Sbjct: 157 YSILIHALGRSEKLYEAFL---LSQQQALSP--LTYNALINACARNNDLEKAINLISR-M 210
Query: 143 EREPLTQKLVCNTLLYR--LSNNSMASEAAAILRKMG-----DRGYLPESSTFDYTVTCL 195
++ V +L+ + + +N + S IL+K+ D+ L + D V
Sbjct: 211 RQDGYPSDFVNYSLIIQSLVRSNRIDS---PILQKLYSEIQCDKLELDVQLSNDIIVGFA 267
Query: 196 VTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNV 255
G D N+ L G+ PR +T + ++ AL +GR +E + + + L
Sbjct: 268 KAG-DPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKT 326
Query: 256 NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
+YN ++ + K M+ A I EM ++P+ T++ LI + R +L
Sbjct: 327 RAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKE 386
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
+ P+ + F+ ++ ++ + L EM GV P+ YN++I +
Sbjct: 387 MEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSC 446
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+ ++ F KM ++ I PD T+N LI C+ E+AE+ F M+ G P +++
Sbjct: 447 LDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNI 506
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+I + + R+D+ K +M G P+ T +++ + GRF +A + ++ K G
Sbjct: 507 MINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAG 566
Query: 496 ISFKS 500
+ S
Sbjct: 567 LKPSS 571
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 2/213 (0%)
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL--DCL 348
+T+N LI+ ++ ++ K L+ + + G+ D ++ +I L R++R + +
Sbjct: 185 LTYNALINACARNNDLEKAINLISRMRQDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLY 244
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
SE+ + + N +I GD +++ +QA +SP T A+I +
Sbjct: 245 SEIQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDS 304
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+I +AE F M GL+P +Y+ L+K +K+G +A+ ME++G +PD T
Sbjct: 305 GRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTY 364
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+L+++ GR+E A ++K + I S+
Sbjct: 365 SLLIDAYSNAGRWESARIVLKEMEANNIMPNSY 397
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ Y +ID KS A + M KP YN LI+ + G+ ++
Sbjct: 530 LGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQ 589
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ + M P++ LI+ F +R AE F VL+ MKE ++ P+ T +L+
Sbjct: 590 AVNAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMK 649
Query: 124 GVFR 127
+ R
Sbjct: 650 ALIR 653
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/513 (22%), Positives = 234/513 (45%), Gaps = 40/513 (7%)
Query: 26 IDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTI 85
+D A F +M + P ++ L + + + L ++M LG + I
Sbjct: 43 LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF---RCLDPHKAFELLIRFM 142
+ + +C R+ F VL I + + N T +L+ G+F + D F+ L+R
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162
Query: 143 EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
EP +++ T++ LS + ++LR M P+ T+ + L ++L+
Sbjct: 163 ICEP--NEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLD 220
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
+L+ ++ + P TY L++ L K G+ + L+ + + NV++++++I
Sbjct: 221 AAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILI 280
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
D CK ++ A E+ R M ++ + P+++T++ ++ G+C +V + R + +L + G K
Sbjct: 281 DGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIK 340
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA----- 377
P+ F+++ +I+ C+ A+ E+ + G+ P+T+TY+ ++ L +G +
Sbjct: 341 PNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKI 400
Query: 378 ------------------------------RSLRLFQKMQADRISPDIYTFNALIQSFCR 407
++ LF K++ +R +I + +I C+
Sbjct: 401 FDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCK 460
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+++ +A F + ++GL PD +Y+ +I + G FDE K ME NGC ++ T
Sbjct: 461 NDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNIT 520
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
N+I++ + + E +K RG SF +
Sbjct: 521 YNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDA 553
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 169/396 (42%), Gaps = 35/396 (8%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P R Y+ VIDAL K ++D A +M P+ FTYN LI G+C++G ++ L
Sbjct: 201 PDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTL 260
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M L PNV+T++ILIDG C +V + V+ M E+ V P+ T +++ G
Sbjct: 261 LSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGY-- 318
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
CL A + + D+G P +
Sbjct: 319 CL---------------------------------RGQVDRARRVFNVLRDKGIKPNIFS 345
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + +L + + ++G+KP TY ++ L + GR + + + +
Sbjct: 346 YSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEML 405
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ ++ ++ ++ + K +++ A + ++ N+ + +I+G CK+ V
Sbjct: 406 RVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVR 465
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ + L G PD T+N MI CR F++ L +M + G P N ITYN+++
Sbjct: 466 EAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIM 525
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
+ ++ + ++M S D T LI
Sbjct: 526 QGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLIN 561
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 163/365 (44%), Gaps = 35/365 (9%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ YN++ID L K + +M P+ T++ILI G+C+ G V++A
Sbjct: 234 IPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDAD 293
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+++ M G P++ TY+ ++DG+C +V RV +++++ + PN + L++G
Sbjct: 294 EVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGY 353
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ + KA +L ++ +G P++
Sbjct: 354 CKKKNLAKAMQL-----------------------------------FGEISQKGLKPDT 378
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + L+ + + I D ++ G P + L+ +K G E +
Sbjct: 379 VTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSK 438
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++R +N++ Y +VI+ CK + + A I ++ + P++ T+N +I+G C++
Sbjct: 439 LERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGL 498
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + +L + + G + T+N ++ R+++ + + + EM G + T +
Sbjct: 499 FDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGV 558
Query: 366 LIRSL 370
LI L
Sbjct: 559 LINVL 563
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 145/335 (43%), Gaps = 41/335 (12%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L I+P+ ++ +ID L K ++ A + M +PD TY+ ++ G C G VD
Sbjct: 267 LNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDR 326
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A R+ + G PN+++Y+ILI+G+C K +A+ ++ + ++ + P+ T +++H
Sbjct: 327 ARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILH 386
Query: 124 G---VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
G V R D K F+ ++R P + +TLL+ + EA + K+
Sbjct: 387 GLIEVGRIGDAKKIFDEMLRV---GPTPDICLHSTLLFGYFKYGLVEEAMLLFSKL---- 439
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
E + D + S Y +++ L K R E
Sbjct: 440 ---ERNREDTNI----------------------------SFYTVVINGLCKNDRVREAH 468
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L+ +V +YN++I FC+ + D I R+M D N +T+N ++ G
Sbjct: 469 AIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGF 528
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
+ ++ + + + GF D T +I+ L
Sbjct: 529 FRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVL 563
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 12/212 (5%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS G+ P T Y+ ++ L++ I A F +M PD ++ L+ G + G+
Sbjct: 369 ISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGL 428
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V+EA+ L ++E N+ YT++I+G C RV E + E + + P+ T
Sbjct: 429 VEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNV 488
Query: 121 LVHGVFR--CLDPHKAFELLIRFMEREPL-TQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
++ G R D K ++R ME + N ++ ++ SE + +++M
Sbjct: 489 MITGFCREGLFDEVKG---ILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMA 545
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
RG+ +FD T T ++ + L E I+D
Sbjct: 546 GRGF-----SFDATTTGVLINV-LKENPSIVD 571
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 30/167 (17%), Positives = 72/167 (43%), Gaps = 7/167 (4%)
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
F+ + CL +DA+ MV P+ I ++ L +++ + + + LF++M+
Sbjct: 36 FDKEVSCL------DDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMR 89
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
I N + S+C ++I+ A L G+ + +++ L+ L +
Sbjct: 90 ILGIPISDSILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVT 149
Query: 448 EAKQTFLSM-EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+A F + + C P+ ++ L ++G E+ +++ ++
Sbjct: 150 DAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQ 196
>gi|297808491|ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317966|gb|EFH48388.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 588
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 211/451 (46%), Gaps = 16/451 (3%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV 68
S ++++++ L +D A ++M P +N L++G+C++G +++A LV
Sbjct: 118 SLSIHSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYIEKADGLV 177
Query: 69 KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH----- 123
++M +G +PN +Y LI G C+ V + + + + + PN T +VH
Sbjct: 178 REMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIVHALCQK 237
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
GV + E+L PL + C L+ N +A + ++M +
Sbjct: 238 GVIGNNNTKLLEEILDSSQVNAPL-DIVTCTILMDSCFKNGNVVQALEVWKEMSQKNVPT 296
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-----DVE 238
+S ++ + L + ++ G + +KRGV P TY L+ AL KAG+ D+
Sbjct: 297 DSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLH 356
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
G V D++ SY ++I C +DRA E + M R + P ++ +N +I
Sbjct: 357 GTMQNVGVAPDQI-----SYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVID 411
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G+ + + +L ++L G KP+ +T N++I + R DA +EM + P
Sbjct: 412 GYGRYGDTSCALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHP 471
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+T TYN+L+ + C +G + + +L+ +M PDI T+ L++ C ++++AE
Sbjct: 472 DTTTYNLLVGAACTLGHLRLAFQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEAESLL 531
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
M G+ D+ + L+K + R DEA
Sbjct: 532 SRMQVSGITMDHVPFLILVKKYTRLQRPDEA 562
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 214/494 (43%), Gaps = 39/494 (7%)
Query: 16 VIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHG-----ICRIGVVDEALRLVKQ 70
V+D ++KS+ LA L+ SV Q K + ++ IH +C G +D AL L ++
Sbjct: 88 VLDYILKSSLDRLASLR---ESVCQTKNFEYDDSLSIHSSIMRDLCLQGKMDAALWLREK 144
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M G+ P + + L++G C + + ++ M+E PN + +L+ G+ +
Sbjct: 145 MLRSGFIPGLIMHNHLLNGLCKLGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNN 204
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
KA L + ++ CN +++ L +G + ++T
Sbjct: 205 VDKALYLFSTLNKYGIKPNRVTCNIIVHALCQ----------------KGVIGNNNT--- 245
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
L LD ++ LD T +LM++ +K G V+ + +
Sbjct: 246 --KLLEEILDSSQVNAPLDIV----------TCTILMDSCFKNGNVVQALEVWKEMSQKN 293
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+ ++ YN++I C M A +M R + P++ T+NTLIS CK +
Sbjct: 294 VPTDSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVAC 353
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+L + G PD+ ++ +I LC + A + L M++ + P + +N++I
Sbjct: 354 DLHGTMQNVGVAPDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGY 413
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
GD + +L + M + + P++YT NALI + + ++ A M + + PD
Sbjct: 414 GRYGDTSCALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDT 473
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+Y+ L+ A G A Q + M + GC PD T ++ L +GR +EA ++
Sbjct: 474 TTYNLLVGAACTLGHLRLAFQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEAESLLSR 533
Query: 491 SKERGISFKSFPGL 504
+ GI+ P L
Sbjct: 534 MQVSGITMDHVPFL 547
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 182/415 (43%), Gaps = 39/415 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV-D 62
+G SP+ YN +I L N++D A F ++ KP+R T NI++H +C+ GV+ +
Sbjct: 183 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIVHALCQKGVIGN 242
Query: 63 EALRLVKQM--EGLGYAP-NVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+L++++ AP ++ T TIL+D V + V + M ++NV P ++ V
Sbjct: 243 NNTKLLEEILDSSQVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEMSQKNV-PTDSVV- 300
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+ ++IR + C+ S N +A A + M R
Sbjct: 301 ---------------YNVIIRGL----------CS------SGNMVA--AYGFMCDMVKR 327
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G P+ T++ ++ L + C + T GV P +Y ++++ L G
Sbjct: 328 GVNPDVFTYNTLISALCKAGKFDVACDLHGTMQNVGVAPDQISYKVIIQGLCIQGDVDRA 387
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ +L + K L+ V +N+VID + + A + M + PN+ T N LI G
Sbjct: 388 NEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLMLSYGVKPNVYTNNALIHG 447
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ K + + + PD T+N ++ C A EM++ G P+
Sbjct: 448 YVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHLRLAFQLYDEMLKRGCQPD 507
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
ITY L+R LC G + + L +MQ I+ D F L++ + R+ + ++A
Sbjct: 508 IITYTELVRGLCWKGRLKEAESLLSRMQVSGITMDHVPFLILVKKYTRLQRPDEA 562
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ NA+I VK + A+ +M + PD TYN+L+ C +G + A
Sbjct: 433 GVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHLRLA 492
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L +M G P++ TYT L+ G C R+ E +L M+ + + LV
Sbjct: 493 FQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEAESLLSRMQVSGITMDHVPFLILVKK 552
Query: 125 VFRCLDPHKAFELLIRFM 142
R P +A+ + +++
Sbjct: 553 YTRLQRPDEAYLVYKKWL 570
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 224/486 (46%), Gaps = 3/486 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS R Y+ ++ A K ++ ++M KP+ ++Y I I + + DEA
Sbjct: 190 GVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEA 249
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++ +ME G P+V T+T+LI C+A R+++ V MK+ + P+ T +L+
Sbjct: 250 YRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDK 309
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYLP 183
D E+ M+ + +V T ++ L EA + +M +G +P
Sbjct: 310 FGDNGDSQSVMEIW-NAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVP 368
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
E +++ ++ + + + G KP T++L + K+G ++ +
Sbjct: 369 EQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRY 428
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +V +V + N V+ K + A + E++ ++P+ +T+ +I K
Sbjct: 429 ELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKA 488
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + ++ ++E PD NS+ID L +A R ++A ++ E + P TY
Sbjct: 489 SKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTY 548
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L+ L G V + L ++M P++ T+N ++ C+ + A +SM T
Sbjct: 549 NTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTT 608
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G PD SY+ +I L+K R++EA F M++ PD T IL + V+ G +E
Sbjct: 609 KGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKE 667
Query: 484 AHDIVK 489
A I+K
Sbjct: 668 ALHIIK 673
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 145/552 (26%), Positives = 235/552 (42%), Gaps = 72/552 (13%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP T Y +I K++ D A F M + C PD N LI + + G DE
Sbjct: 469 MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDE 528
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A R+ Q++ + P TY L+ G +V EV +LE M N PN T +++
Sbjct: 529 AWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILD 588
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + + A ++L + + NT++Y L +EA +I +M + +P
Sbjct: 589 CLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIP 647
Query: 184 ESSTFDYTVTCLVTGLDLNETCGIL-DTFIKRGVKPRFSTYLLLMEALYK---------- 232
+ +T + V + E I+ D F++ G K S+ LME + K
Sbjct: 648 DYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEF 707
Query: 233 ----AGRDVEGDRY-----LNHVFKDR-------LVSNVNS---------YNMVIDCFCK 267
A + D + + H+ K + LV S YN +I
Sbjct: 708 AEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVD 767
Query: 268 VNMMDRATEICREMRDRDIAPN-----------------------------------LVT 292
N++D A + EM++ P+ VT
Sbjct: 768 ENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVT 827
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+NT+ISG K + + +L L+ GF P T+ ++D L +A R EDA + +EM+
Sbjct: 828 YNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEML 887
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
E+G N YNIL+ G+ + LFQ M I+PDI ++ +I + C+ ++
Sbjct: 888 EYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLN 947
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
F +L +GL PD +Y+ LI L KS R +EA F M++ G P+ YT N ++
Sbjct: 948 DGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLI 1007
Query: 473 ETLVQQGRFEEA 484
L + G+ EA
Sbjct: 1008 LHLGKAGKAAEA 1019
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 211/483 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + YN ++ LVKS A ++ M VD P TY++L+ + V+
Sbjct: 155 GIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETV 214
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+++ME G PNVY+YTI I AKR E +R+L M+ P+ T L+
Sbjct: 215 LWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQV 274
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A ++ + + + ++ TLL + +N + I M GY
Sbjct: 275 LCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDN 334
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + L + E + D ++G+ P +Y L+ KA R +
Sbjct: 335 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 394
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
H+ N ++ + I+ + K +A + M+ + I P++V N ++ G K
Sbjct: 395 HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG 454
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + L G PD T+ MI C +A +F++A+ +M+E P+ + N
Sbjct: 455 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVN 514
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI +L G + R+F +++ + P T+N L+ R K+++ M
Sbjct: 515 SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 574
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
P+ +Y+ ++ L K+G ++A SM GC PD + N ++ LV++ R+ EA
Sbjct: 575 NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 634
Query: 485 HDI 487
I
Sbjct: 635 FSI 637
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/500 (24%), Positives = 220/500 (44%), Gaps = 45/500 (9%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ YN ++D L K+ +++ A M+ C PD +YN +I+G+ + +EA +
Sbjct: 578 PNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSI 637
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
QM+ + P+ T ++ F ++ + L I+K+ + P T RS H +
Sbjct: 638 FCQMKKV-LIPDYATLCTILPSFV---KIGLMKEALHIIKDYFLQPGSKTDRSSCHSLME 693
Query: 128 CLDPHKAFELLIRF-----------------------------MEREPLTQKL------- 151
+ E I F +E L +K
Sbjct: 694 GILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSL 753
Query: 152 ---VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
+ N+L+ L + ++ A + +M + G P+ T++ + + + + E +
Sbjct: 754 KTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQ 813
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
+ ++G + + TY ++ L K+ R + D Y N + +Y ++D K
Sbjct: 814 EEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN-LMSQGFSPTPCTYGPLLDGLLK 872
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
++ A + EM + N +N L++GH K L +++ G PD +
Sbjct: 873 AGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKS 932
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+ +ID LC+A + D L +++E G+ P+ ITYN+LI L + ++ LF +MQ
Sbjct: 933 YTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQ 992
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
I P++YT+N+LI + K +A K + +LT G +P+ F+Y+ALI+ SG D
Sbjct: 993 KKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTD 1052
Query: 448 EAKQTFLSMEQNGCNPDSYT 467
A + M GC P+S T
Sbjct: 1053 SAYAAYGRMIVGGCLPNSST 1072
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 123/534 (23%), Positives = 227/534 (42%), Gaps = 41/534 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y I L ++ D AY +M + CKPD T+ +LI +C G + +A
Sbjct: 225 GVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDA 284
Query: 65 -----------------------------------LRLVKQMEGLGYAPNVYTYTILIDG 89
+ + M+ GY NV YT +ID
Sbjct: 285 KDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDA 344
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C RV E + + MK++ + P + + SL+ G + A EL P
Sbjct: 345 LCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN 404
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ + + +A M +G +P+ + + L L +
Sbjct: 405 GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFH 464
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
GV P TY ++++ KA + E + + ++ V +V + N +ID K
Sbjct: 465 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAG 524
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
D A I ++++ ++ P T+NTL++G ++ +V + LL + + P+ T+N
Sbjct: 525 RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYN 584
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+++DCLC+ DALD L M G P+ +YN +I L + +F +M+
Sbjct: 585 TILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 644
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAE---KAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
I PD T ++ SF ++ +++A K +F L G + D S +L++ ++K
Sbjct: 645 LI-PDYATLCTILPSFVKIGLMKEALHIIKDYF--LQPGSKTDRSSCHSLMEGILKKAGI 701
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+++ + + +G D + +++ L +Q + EAH++VK K G+S K+
Sbjct: 702 EKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKT 755
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 192/443 (43%), Gaps = 3/443 (0%)
Query: 51 LIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
L+ G R+G + E ++++ NV T+ + G + L +MKE
Sbjct: 99 LMRGHGRVGDMAEVFDVMQRQI---VKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAG 155
Query: 111 VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA 170
+ N T LV+ + + +A E+ M + + L+
Sbjct: 156 IVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 215
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
+LR+M G P ++ + L +E IL G KP T+ +L++ L
Sbjct: 216 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 275
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
AGR + + K + +Y ++D F EI M+ N+
Sbjct: 276 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 335
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
V + +I C+ V + E+ + + G P+++++NS+I +A RF DAL+
Sbjct: 336 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 395
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M G PN T+ + I G+ ++++ ++ M++ I PD+ NA++ + +
Sbjct: 396 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 455
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+ A++ F + +G+ PD +Y+ +IK K+ +FDEA + F M +N C PD N
Sbjct: 456 LGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNS 515
Query: 471 ILETLVQQGRFEEAHDIVKTSKE 493
+++TL + GR +EA I KE
Sbjct: 516 LIDTLYKAGRGDEAWRIFYQLKE 538
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 218/498 (43%), Gaps = 10/498 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P NAV+ L KS + +A F ++ PD TY ++I + DEA
Sbjct: 435 GIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEA 494
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ M P+V LID A R E +R+ +KE N+ P + T +L+ G
Sbjct: 495 VKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAG 554
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R + LL + NT+L L N ++A +L M +G +P+
Sbjct: 555 LGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPD 614
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S+++ + LV NE I +K+ + P ++T ++ + K G E
Sbjct: 615 LSSYNTVIYGLVKEERYNEAFSIF-CQMKKVLIPDYATLCTILPSFVKIGLMKEA----L 669
Query: 245 HVFKDRLV-----SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
H+ KD + ++ +S + +++ K ++++ E + I + LI
Sbjct: 670 HIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKH 729
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK + + EL+ G +NS+I L + + A +EM E G P+
Sbjct: 730 LCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPD 789
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
TYN+L+ ++ + L++ ++M T+N +I + ++E+A ++
Sbjct: 790 EFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYY 849
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
++++ G P +Y L+ L+K+GR ++A+ F M + GC + N++L G
Sbjct: 850 NLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAG 909
Query: 480 RFEEAHDIVKTSKERGIS 497
E+ + + ++GI+
Sbjct: 910 NTEKVCHLFQDMVDQGIN 927
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 201/472 (42%), Gaps = 37/472 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN VI LVK + A+ F QM PD T ++ +IG++ EA
Sbjct: 610 GCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEA 668
Query: 65 LRLVKQ-----------------MEGL----------GYAPNVYTYTILIDGF------- 90
L ++K MEG+ +A + + I +D F
Sbjct: 669 LHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIK 728
Query: 91 --CNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
C K+ E +++ K V SL+ G+ A L E
Sbjct: 729 HLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGP 788
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
+ N LL + + E + +M +GY T++ ++ LV L + +
Sbjct: 789 DEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLY 848
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ +G P TY L++ L KAGR + + N + + +N YN++++
Sbjct: 849 YNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIA 908
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
++ + ++M D+ I P++ ++ +I CK +++ LLE G +PD T+
Sbjct: 909 GNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITY 968
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N +ID L ++ R E+A+ +EM + G+ PN TYN LI L G A + ++++++
Sbjct: 969 NLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLT 1028
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
P+++T+NALI+ + + A A+ M+ G P++ +Y L L
Sbjct: 1029 KGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQLPNQL 1080
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 151/337 (44%), Gaps = 16/337 (4%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLV-TGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
A L M + G + + T++ V LV +G D E + + GV P TY +LM
Sbjct: 144 APVALPVMKEAGIVLNAYTYNGLVYFLVKSGFD-REALEVYRVMMVDGVVPSVRTYSVLM 202
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
A K RDVE +L + V NV SY + I + D A I +M +
Sbjct: 203 VAFGKR-RDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGC 261
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P+++T LI C + +++ + + KPD+ T+ +++D +F D D
Sbjct: 262 KPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLD------KFGDNGD 315
Query: 347 CLSEMVEW------GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
S M W G N + Y +I +LC +G V +L +F +M+ I P+ Y++N+
Sbjct: 316 SQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNS 375
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI F + ++ A + F M G +P+ +++ I KSG +A Q + M+ G
Sbjct: 376 LISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKG 435
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
PD N +L L + GR A + K G+S
Sbjct: 436 IVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVS 472
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 124/271 (45%), Gaps = 1/271 (0%)
Query: 226 LMEALYKAGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
++ AL A E +R+ + K R+ S N +++ + E+ M+ +
Sbjct: 60 VIHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQ 119
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
+ N+ TF + G + + L ++ E G + +T+N ++ L ++ +A
Sbjct: 120 IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREA 179
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
L+ M+ GV P+ TY++L+ + DV L L ++M+A + P++Y++ I+
Sbjct: 180 LEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRV 239
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+ + ++A + M G +PD +++ LI+ L +GR +AK F M+++ PD
Sbjct: 240 LGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPD 299
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
T +L+ G + +I K G
Sbjct: 300 RVTYITLLDKFGDNGDSQSVMEIWNAMKADG 330
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P YN +ID L KS ++ A F +M P+ +TYN LI + + G E
Sbjct: 959 MGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAE 1018
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
A ++ +++ G+ PNV+TY LI G+ + + M PN +T L
Sbjct: 1019 AGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQL 1076
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 218/486 (44%), Gaps = 7/486 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN ++ AL ++N + A +M+ C PD TY ++ +C++ +DEA
Sbjct: 154 GVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEA 213
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ M P +Y ++ C R+ EVF V+ M R + PN T ++V
Sbjct: 214 TEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDA 268
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLP 183
+ + A +L R M T +V T L R L ++ +A + R M G+ P
Sbjct: 269 FCKAGELRMACAILAR-MVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAP 327
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ +++ + L + DL IL++ + G P TY L++ KAG
Sbjct: 328 STVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIW 387
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + + NV Y ++D FCK M ++A + +M + PN VTFNTLI C
Sbjct: 388 NDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDC 447
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V + + + G P+ T+N +I L R DAL ++EM G+ + +TY
Sbjct: 448 RRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTY 507
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N ++ LC ++ KM I P+ +TF+A+I ++C+ ++ A +M
Sbjct: 508 NTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNV 567
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+ + Y+ L+ L + +A L M G P++ T N+++ + + E
Sbjct: 568 VNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIE 627
Query: 484 AHDIVK 489
D ++
Sbjct: 628 PSDFIQ 633
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 181/429 (42%), Gaps = 5/429 (1%)
Query: 56 CRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNE 115
C +V + + M G PNV+TY +L+ C RV ++L+ M + P++
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194
Query: 116 ATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
T ++V + + +A E+L P+ N ++ L E +++
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAM---PPVAASY--NAIVLALCREFRMQEVFSVVSD 249
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
M RG P T+ V +L C IL + G P T+ L+ L+ GR
Sbjct: 250 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGR 309
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
+ + + + SYN++I C V + A+ I M PN+ T++T
Sbjct: 310 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYST 369
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
LI G K ++ + + G KP+ + +M+D C+ F A + +M+
Sbjct: 370 LIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLEN 429
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
PPNT+T+N LIRSLC V R+L +F +M+ P+ T+N LI R A
Sbjct: 430 CPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDAL 489
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
M + G+ +Y+ ++ L ++ EA M G P+++T + I+
Sbjct: 490 HMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAY 549
Query: 476 VQQGRFEEA 484
++G A
Sbjct: 550 CKEGEVRMA 558
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 141/319 (44%), Gaps = 30/319 (9%)
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+ D K GV P TY LL+ AL + R + L+ + + + +Y ++ C
Sbjct: 146 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLC 205
Query: 267 KVNMMDRATEI------------------CREMR------------DRDIAPNLVTFNTL 296
K++ +D ATE+ CRE R R + PN++T+ T+
Sbjct: 206 KLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTI 265
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ CK E+ +L ++ G P+ TF +++ L R DALD MV G
Sbjct: 266 VDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGW 325
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
P+T++YNILIR LC++GD+ + + M+ P++ T++ LI F + + A
Sbjct: 326 APSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAIS 385
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
+ M G +P+ Y+ ++ K F++AK M C P++ T N ++ +L
Sbjct: 386 IWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLC 445
Query: 477 QQGRFEEAHDIVKTSKERG 495
R A + + G
Sbjct: 446 DCRRVGRALGVFHEMRRHG 464
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 152/346 (43%), Gaps = 5/346 (1%)
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
N L+ L N+ A +L +M +G P+ T+ V+ L L+E +L
Sbjct: 163 NLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAA--- 219
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
+ P ++Y ++ AL + R E ++ + L NV +Y ++D FCK +
Sbjct: 220 --MPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRM 277
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A I M PN+VTF L+ G D VH ++ ++ G+ P ++N +I
Sbjct: 278 ACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIR 337
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
LC + A L+ M + G PN TY+ LI GD+ ++ ++ M P
Sbjct: 338 GLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKP 397
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
++ + ++ FC+ +A+ ML P+ +++ LI++L R A F
Sbjct: 398 NVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVF 457
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
M ++GC P+ T N ++ L ++G +A +V + GI
Sbjct: 458 HEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELS 503
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 208/460 (45%), Gaps = 36/460 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P + +N ++ L++SN D A+ F ++ + D +++ I+I G C G +
Sbjct: 119 GHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELK-SKVVLDAYSFGIMIKGCCEAGYFVKG 177
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL+ +E G +PNV YT LIDG C V + M + PN T L++G
Sbjct: 178 FRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNG 237
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ + F++ + N L+ N+ M +A + +M ++G
Sbjct: 238 FFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGI--- 294
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
CG++ TY +L+ L + + E + ++
Sbjct: 295 -------------------ACGVM-------------TYNILIGGLCRGKKFGEAVKLVH 322
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
V K L N+ +YN++I+ FC V MD A + +++ ++P LVT+NTLI+G+ K
Sbjct: 323 KVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVE 382
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +L+ + E P K T+ +ID R + E A + S M + G+ P+ TY+
Sbjct: 383 NLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYS 442
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+L+ LC G++ + +LF+ + + P+ +N +I +C+ +A + M+
Sbjct: 443 VLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQS 502
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
G+ P+ S+ + I L + ++ EA+ M +G P
Sbjct: 503 GMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPS 542
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 146/282 (51%)
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G+ P TY +LM +K G EG + ++ + +V N +YN +I +C M+D+A
Sbjct: 223 GLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKA 282
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
++ EMR++ IA ++T+N LI G C+ + + +L+ + + G P+ T+N +I+
Sbjct: 283 FKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILING 342
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
C + + A+ +++ G+ P +TYN LI + ++A +L L ++M+ I+P
Sbjct: 343 FCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPS 402
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
T+ LI +F R+N EKA + M GL PD ++YS L+ L G EA + F
Sbjct: 403 KVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFK 462
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
S+ + P+S N ++ ++G A ++ + G+
Sbjct: 463 SLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGM 504
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 159/361 (44%), Gaps = 36/361 (9%)
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
+A L M G++P S+TF+ + L+ ++ I + + V +S + +++
Sbjct: 107 QALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKSKVVLDAYS-FGIMI 165
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
+ +AG V+G R L + + L NV Y +ID CK + A + +M +
Sbjct: 166 KGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLV 225
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
PN T++ L++G K + ++ + G P+ + +N +I C + A
Sbjct: 226 PNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKV 285
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
+EM E G+ +TYNILI LC +++L K+ +SP+I T+N LI FC
Sbjct: 286 FAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCD 345
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK----SGRFDEAKQ------------ 451
+ K++ A + F + + GL P +Y+ LI K +G D K+
Sbjct: 346 VRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVT 405
Query: 452 -TFLS------------------MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
T L ME++G PD YT +++L L G +EA + K+
Sbjct: 406 YTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLG 465
Query: 493 E 493
E
Sbjct: 466 E 466
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 166/399 (41%), Gaps = 36/399 (9%)
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYR----------------LSNNSMASEAAAILRK 175
H+A L+ + ++ P L+ NT Y+ LS+ + + ILR
Sbjct: 5 HEALILIQKMVKVPPTKALLLFNTATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRL 64
Query: 176 MGDRGYLPES-----------------STFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
+ R +P S +D V V ++ L I G P
Sbjct: 65 ISGR--IPSSLMLQLTQAHFTPCSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVP 122
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
+T+ L+ L ++ + ++ + K ++V + S+ ++I C+ + +
Sbjct: 123 LSNTFNNLLCLLIRSNY-FDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLL 181
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
+ + ++PN+V + TLI G CKD V + L + G P+ T++ +++ +
Sbjct: 182 AMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQ 241
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+ M G+ PN YN LI C G V ++ ++F +M+ I+ + T+
Sbjct: 242 GLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTY 301
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
N LI CR K +A K + +GL P+ +Y+ LI + D A + F ++
Sbjct: 302 NILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKS 361
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+G +P T N ++ + A D+VK +ER I+
Sbjct: 362 SGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIA 400
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 105/237 (44%), Gaps = 8/237 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP+ YN +I+ +D A F Q+ P TYN LI G ++ +
Sbjct: 327 VGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAG 386
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL LVK+ME AP+ TYTILID F + + +M++ + P+ T L+H
Sbjct: 387 ALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLH 446
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +A +L E ++ NT+++ + A +L +M G +P
Sbjct: 447 GLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVP 506
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
++F T+ L E +L I G+KP S LYK V+GD
Sbjct: 507 NVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVS--------LYKMVHKVKGD 555
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/529 (23%), Positives = 228/529 (43%), Gaps = 38/529 (7%)
Query: 5 GISPSTRLYNAVIDALVK-SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G PS + +VI A VK N ++ LK + +S + + L+ G C+ +
Sbjct: 309 GWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCG-VQMNVVVATTLVKGYCKQDKLVS 367
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL +M G +PN TY +LI+ C +A+ + + MK +N+CP V SL+
Sbjct: 368 ALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIR 427
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + +A +L + + + N+LL L SEA + +KM D+G P
Sbjct: 428 GFLKVESREEASKLFDEAVACD-IANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAP 486
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK----------- 232
+++ + +L+ + + G+KP TY +LM+ +K
Sbjct: 487 TKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVF 546
Query: 233 ------------------------AGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
GR E L + V +YN ++D F K
Sbjct: 547 DRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKE 606
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+ A REM + ++PN++T+ TLI+G CK+ ++ + G + D +
Sbjct: 607 GSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAY 666
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
++ID C+ E A SE+++ G+ PN++ YN LI + ++ +L L ++M
Sbjct: 667 GALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLG 726
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ IS D+ T+ LI + ++ A + M G+ PD Y+ LI L G+ +
Sbjct: 727 EGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLEN 786
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
A++ ME++ P+ N ++ + G +EA + ++G++
Sbjct: 787 AQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLT 835
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 211/452 (46%), Gaps = 3/452 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ + N++I +K S + A F + +V + FTYN L+ +C+ G + EA
Sbjct: 415 ICPTVFIVNSLIRGFLKVESREEASKLFDE-AVACDIANIFTYNSLLSWLCKEGKMSEAT 473
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L ++M G AP +Y +I G C + V M + + PN T L+ G
Sbjct: 474 TLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGY 533
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
F+ D AF + R ++ + N + L SEA +L+K ++G++P
Sbjct: 534 FKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVC 593
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + + ++ + GV P TY L+ K + N
Sbjct: 594 LTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNE 653
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ L ++ +Y +ID FCK ++ A+ + E+ D ++PN V +N+LISG+
Sbjct: 654 MRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNN 713
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ L +L G D T+ ++ID L + R ALD SEM G+ P+ I Y +
Sbjct: 714 MEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTV 773
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI LC G + + ++ +M+ D I+P++ +NALI + +++A + ML G
Sbjct: 774 LINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKG 833
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
L P++ +Y LI IK G + A ++ LS++
Sbjct: 834 LTPNDTTYDILINGKIKGG--NSALKSLLSLK 863
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/528 (24%), Positives = 226/528 (42%), Gaps = 36/528 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ Y+ VI A K+ ++LA + M P T+ +I + G + EA
Sbjct: 274 GVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEA 333
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
LRL +M G NV T L+ G+C ++ + M E PN T L+
Sbjct: 334 LRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEW 393
Query: 125 VFRCLDPHKAFEL------------------LIR-FMEREP-------LTQKLVC----- 153
+ + KA++L LIR F++ E + + C
Sbjct: 394 CCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANI 453
Query: 154 ---NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
N+LL L SEA + +KM D+G P +++ + +L+ +
Sbjct: 454 FTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSD 513
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL-NHVFKDRLVSNVNSYNMVIDCFCKVN 269
+ G+KP TY +LM+ +K G D E Y+ + + + +V + +YN+ I+ CKV
Sbjct: 514 MLDCGLKPNVITYSILMDGYFKNG-DTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVG 572
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
A ++ ++ ++ P +T+N+++ G K+ V + E G P+ T+
Sbjct: 573 RTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYT 632
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++I+ C+ + + AL +EM G+ + Y LI C D+ + LF ++
Sbjct: 633 TLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDG 692
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+SP+ +N+LI + +N +E A ML G+ D +Y+ LI L+K GR A
Sbjct: 693 GLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLA 752
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ M G PD +++ L +G+ E A I+ + I+
Sbjct: 753 LDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSIT 800
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 208/475 (43%), Gaps = 1/475 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP+ Y +I+ K+ ++ AY + QM P F N LI G ++ +EA
Sbjct: 379 GPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEA 438
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L + A N++TY L+ C +++E + + M ++ + P + + S++ G
Sbjct: 439 SKLFDEAVACDIA-NIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILG 497
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + A + ++ + + L+ N A + +M D +P
Sbjct: 498 HCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPS 557
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L +E +L F+++G P TY +M+ K G
Sbjct: 558 DFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYR 617
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + NV +Y +I+ FCK N D A ++ EMR++ + ++ + LI G CK
Sbjct: 618 EMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQ 677
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ L LL+ G P+ +NS+I + E AL+ M+ G+ + TY
Sbjct: 678 DIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYT 737
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI L G + +L L+ +M A I PDI + LI C ++E A+K M
Sbjct: 738 TLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERD 797
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+ P+ Y+ALI K+G EA + M G P+ T ++++ ++ G
Sbjct: 798 SITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGG 852
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 120/530 (22%), Positives = 221/530 (41%), Gaps = 42/530 (7%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P + N ++ ALVK++ I A +++M + D FT +I++ + +EA
Sbjct: 205 IVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAK 264
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ + + G + Y+I+I FC V +L+ M+++ P+E T S++
Sbjct: 265 KFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGAC 324
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ + +A L + +V TL+ A KM + G P
Sbjct: 325 VKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNR 384
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + ++ + + + + P + ++ +L + VE +
Sbjct: 385 VTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPT----VFIVNSLIRGFLKVESREEASK 440
Query: 246 VFKDRL---VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+F + + ++N+ +YN ++ CK M AT + ++M D+ +AP V++N++I GHC+
Sbjct: 441 LFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCR 500
Query: 303 DAEVHKTRELLVMLLECGFKPD-----------------------------------KFT 327
+ + +L+CG KP+ FT
Sbjct: 501 QGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFT 560
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+N I+ LC+ R +A D L + VE G P +TYN ++ G V+ +L +++M
Sbjct: 561 YNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMC 620
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+SP++ T+ LI FC+ N + A K M GL D +Y ALI K +
Sbjct: 621 ESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIE 680
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
A F + G +P+S N ++ E A ++ K GIS
Sbjct: 681 TASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGIS 730
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/522 (19%), Positives = 212/522 (40%), Gaps = 69/522 (13%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
R+YN ++++ +K+N ++ A F ++ P N L+ + + ++ EA + ++
Sbjct: 175 RIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEK 234
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M G + +T I++ E + K R V + A ++ + LD
Sbjct: 235 MVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLD 294
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
EL A +L+ M D+G++P TF
Sbjct: 295 ----VEL-------------------------------ACGLLKDMRDKGWVPSEGTFTS 319
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ V ++ E + D + GV+ L++ K + V + + + ++
Sbjct: 320 VIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENG 379
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP---------------------- 288
N +Y ++I+ CK M +A ++ +M++++I P
Sbjct: 380 PSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEAS 439
Query: 289 ------------NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
N+ T+N+L+S CK+ ++ + L +L+ G P K ++NSMI C
Sbjct: 440 KLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHC 499
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
R + A S+M++ G+ PN ITY+IL+ GD + +F +M + I P +
Sbjct: 500 RQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDF 559
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
T+N I C++ + +A+ + G P +Y++++ IK G A + M
Sbjct: 560 TYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREM 619
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
++G +P+ T ++ + + A + + +G+
Sbjct: 620 CESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLEL 661
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 115/244 (47%)
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
S++ YN +++ + K N ++ A + + DI P + N L++ K+ +++ RE+
Sbjct: 172 SDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREV 231
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
++ G D FT + M+ + + E+A E GV + Y+I+I++ C
Sbjct: 232 YEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCK 291
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
DV + L + M+ P TF ++I + + + +A + M++ G++ +
Sbjct: 292 NLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVV 351
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
+ L+K K + A + F M +NG +P+ T +++E + G +A+D+ K
Sbjct: 352 ATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMK 411
Query: 493 ERGI 496
+ I
Sbjct: 412 NKNI 415
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S GI P +Y +I+ L ++ A +M D P+ YN LI G + G
Sbjct: 759 MSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGN 818
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDG 89
+ EA RL +M G PN TY ILI+G
Sbjct: 819 LQEAFRLHNEMLDKGLTPNDTTYDILING 847
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 224/486 (46%), Gaps = 3/486 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS R Y+ ++ A K ++ ++M KP+ ++Y I I + + DEA
Sbjct: 225 GVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEA 284
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++ +ME G P+V T+T+LI C+A R+++ V MK+ + P+ T +L+
Sbjct: 285 YRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDK 344
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYLP 183
D E+ M+ + +V T ++ L EA + +M +G +P
Sbjct: 345 FGDNGDSQSVMEIW-NAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVP 403
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
E +++ ++ + + + G KP T++L + K+G ++ +
Sbjct: 404 EQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRY 463
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +V +V + N V+ K + A + E++ ++P+ +T+ +I K
Sbjct: 464 ELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKA 523
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + ++ ++E PD NS+ID L +A R ++A ++ E + P TY
Sbjct: 524 SKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTY 583
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L+ L G V + L ++M P++ T+N ++ C+ + A +SM T
Sbjct: 584 NTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTT 643
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G PD SY+ +I L+K R++EA F M++ PD T IL + V+ G +E
Sbjct: 644 KGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKE 702
Query: 484 AHDIVK 489
A I+K
Sbjct: 703 ALHIIK 708
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 211/483 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + YN ++ LVKS A ++ M VD P TY++L+ + V+
Sbjct: 190 GIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETV 249
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+++ME G PNVY+YTI I AKR E +R+L M+ P+ T L+
Sbjct: 250 LWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQV 309
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A ++ + + + ++ TLL + +N + I M GY
Sbjct: 310 LCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDN 369
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + L + E + D ++G+ P +Y L+ KA R +
Sbjct: 370 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 429
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
H+ N ++ + I+ + K +A + M+ + I P++V N ++ G K
Sbjct: 430 HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG 489
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + L G PD T+ MI C +A +F++A+ +M+E P+ + N
Sbjct: 490 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVN 549
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI +L G + R+F +++ + P T+N L+ R K+++ M
Sbjct: 550 SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 609
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
P+ +Y+ ++ L K+G ++A SM GC PD + N ++ LV++ R+ EA
Sbjct: 610 NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 669
Query: 485 HDI 487
I
Sbjct: 670 FSI 672
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 123/534 (23%), Positives = 227/534 (42%), Gaps = 41/534 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y I L ++ D AY +M + CKPD T+ +LI +C G + +A
Sbjct: 260 GVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDA 319
Query: 65 -----------------------------------LRLVKQMEGLGYAPNVYTYTILIDG 89
+ + M+ GY NV YT +ID
Sbjct: 320 KDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDA 379
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C RV E + + MK++ + P + + SL+ G + A EL P
Sbjct: 380 LCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN 439
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ + + +A M +G +P+ + + L L +
Sbjct: 440 GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFH 499
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
GV P TY ++++ KA + E + + ++ V +V + N +ID K
Sbjct: 500 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAG 559
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
D A I ++++ ++ P T+NTL++G ++ +V + LL + + P+ T+N
Sbjct: 560 RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYN 619
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+++DCLC+ DALD L M G P+ +YN +I L + +F +M+
Sbjct: 620 TILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 679
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAE---KAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
I PD T ++ SF ++ +++A K +F L G + D S +L++ ++K
Sbjct: 680 LI-PDYATLCTILPSFVKIGLMKEALHIIKDYF--LQPGSKTDRSSCHSLMEGILKKAGI 736
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+++ + + +G D + +++ L +Q + EAH++VK K G+S K+
Sbjct: 737 EKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKT 790
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 192/443 (43%), Gaps = 3/443 (0%)
Query: 51 LIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
L+ G R+G + E ++++ NV T+ + G + L +MKE
Sbjct: 134 LMRGHGRVGDMAEVFDVMQRQI---VKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAG 190
Query: 111 VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA 170
+ N T LV+ + + +A E+ M + + L+
Sbjct: 191 IVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 250
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
+LR+M G P ++ + L +E IL G KP T+ +L++ L
Sbjct: 251 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 310
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
AGR + + K + +Y ++D F EI M+ N+
Sbjct: 311 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 370
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
V + +I C+ V + E+ + + G P+++++NS+I +A RF DAL+
Sbjct: 371 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 430
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M G PN T+ + I G+ ++++ ++ M++ I PD+ NA++ + +
Sbjct: 431 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 490
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+ A++ F + +G+ PD +Y+ +IK K+ +FDEA + F M +N C PD N
Sbjct: 491 LGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNS 550
Query: 471 ILETLVQQGRFEEAHDIVKTSKE 493
+++TL + GR +EA I KE
Sbjct: 551 LIDTLYKAGRGDEAWRIFYQLKE 573
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 204/471 (43%), Gaps = 2/471 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP T Y +I K++ D A F M + C PD N LI + + G DE
Sbjct: 504 MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDE 563
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A R+ Q++ + P TY L+ G +V EV +LE M N PN T +++
Sbjct: 564 AWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILD 623
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + + A ++L + + NT++Y L +EA +I +M + +P
Sbjct: 624 CLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIP 682
Query: 184 ESSTFDYTVTCLVTGLDLNETCGIL-DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+ +T + V + E I+ D F++ G K S+ LME + K + +
Sbjct: 683 DYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEF 742
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + + +I CK A E+ ++ + ++ +N+LI G
Sbjct: 743 AEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVD 802
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + L + E G PD+FT+N ++D + ++ R E+ L EM G +T
Sbjct: 803 ENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVT 862
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN +I L + +++ L+ + + SP T+ L+ + +IE AE F ML
Sbjct: 863 YNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEML 922
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
G + + Y+ L+ +G ++ F M G NPD + +I++
Sbjct: 923 EYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID 973
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 218/498 (43%), Gaps = 10/498 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P NAV+ L KS + +A F ++ PD TY ++I + DEA
Sbjct: 470 GIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEA 529
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ M P+V LID A R E +R+ +KE N+ P + T +L+ G
Sbjct: 530 VKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAG 589
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R + LL + NT+L L N ++A +L M +G +P+
Sbjct: 590 LGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPD 649
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S+++ + LV NE I +K+ + P ++T ++ + K G E
Sbjct: 650 LSSYNTVIYGLVKEERYNEAFSIF-CQMKKVLIPDYATLCTILPSFVKIGLMKEA----L 704
Query: 245 HVFKDRLV-----SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
H+ KD + ++ +S + +++ K ++++ E + I + LI
Sbjct: 705 HIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKH 764
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK + + EL+ G +NS+I L + + A +EM E G P+
Sbjct: 765 LCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPD 824
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
TYN+L+ ++ + L++ ++M T+N +I + ++E+A ++
Sbjct: 825 EFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYY 884
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
++++ G P +Y L+ L+K+GR ++A+ F M + GC + N++L G
Sbjct: 885 NLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAG 944
Query: 480 RFEEAHDIVKTSKERGIS 497
E+ + + ++GI+
Sbjct: 945 NTEKVCHLFQDMVDQGIN 962
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 151/337 (44%), Gaps = 16/337 (4%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLV-TGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
A L M + G + + T++ V LV +G D E + + GV P TY +LM
Sbjct: 179 APVALPVMKEAGIVLNAYTYNGLVYFLVKSGFD-REALEVYRVMMVDGVVPSVRTYSVLM 237
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
A K RDVE +L + V NV SY + I + D A I +M +
Sbjct: 238 VAFGKR-RDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGC 296
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P+++T LI C + +++ + + KPD+ T+ +++D +F D D
Sbjct: 297 KPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLD------KFGDNGD 350
Query: 347 CLSEMVEW------GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
S M W G N + Y +I +LC +G V +L +F +M+ I P+ Y++N+
Sbjct: 351 SQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNS 410
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI F + ++ A + F M G +P+ +++ I KSG +A Q + M+ G
Sbjct: 411 LISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKG 470
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
PD N +L L + GR A + K G+S
Sbjct: 471 IVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVS 507
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 124/271 (45%), Gaps = 1/271 (0%)
Query: 226 LMEALYKAGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
++ AL A E +R+ + K R+ S N +++ + E+ M+ +
Sbjct: 95 VIHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQ 154
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
+ N+ TF + G + + L ++ E G + +T+N ++ L ++ +A
Sbjct: 155 IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREA 214
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
L+ M+ GV P+ TY++L+ + DV L L ++M+A + P++Y++ I+
Sbjct: 215 LEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRV 274
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+ + ++A + M G +PD +++ LI+ L +GR +AK F M+++ PD
Sbjct: 275 LGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPD 334
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
T +L+ G + +I K G
Sbjct: 335 RVTYITLLDKFGDNGDSQSVMEIWNAMKADG 365
>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 738
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 203/475 (42%), Gaps = 22/475 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ + Y I+ L K+N DL Y Q ++ Y +I G C +DEA
Sbjct: 255 GVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEA 314
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +ME G P+VY Y L+ G+CN++ + V + M R + N ++H
Sbjct: 315 ESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILH- 373
Query: 125 VFRCLDPH----KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
CLD + ++ F E + N L L +A +L ++
Sbjct: 374 ---CLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQ 430
Query: 181 YLPESSTFDYTVTCLVTGLDLN----ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
+ + T L+ G L E + +RG KP Y +L ++ D
Sbjct: 431 LDVDMKHY----TTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTD 486
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
E LN++ + N ++ ++I+ C ++ A E ++ + ++ + L
Sbjct: 487 FEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTAL 546
Query: 297 ISGHCKDAEVHKTREL------LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
++G+C+ A + K+ EL L +LE KP K ++ + LC E A +
Sbjct: 547 VNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNL 606
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
+ G P+ +TY I+I C + + LF+ M+ I+PD T+ +I +C+MN
Sbjct: 607 FIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNC 666
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
+ +A + F M G++PD +Y+ +IK L+ SG + A Q + M G P +
Sbjct: 667 LREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGMTPGA 721
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 208/461 (45%), Gaps = 6/461 (1%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P+ ++N LI+ + + VD AL L + + G N YTYTI+I C V RV
Sbjct: 188 PNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRV 247
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
+ MKE V + + + G+ + + +L + R K ++ N
Sbjct: 248 FDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCN 307
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+ EA ++ +M +G +P+ + V + ++ + + I RG+K
Sbjct: 308 ETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVI 367
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
+ ++ L + GR +E + L + +YN++ D CK+ +D A + E++
Sbjct: 368 FSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELK 427
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+ ++ + TLI+G+ + + + L + E GFKPD +N + R
Sbjct: 428 SMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDF 487
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+A+D L+ M GV PN+ T+ I+I LC+ G V + F ++ + + + + AL+
Sbjct: 488 EAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALV 547
Query: 403 QSFCRMNKIEKA---EKAFF---SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
+C IEK+ ++AF +ML + ++P YS + AL +G + A F
Sbjct: 548 NGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLF 607
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G PD+ T +++ + EAH++ K KERGI+
Sbjct: 608 IHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGIT 648
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 146/353 (41%), Gaps = 15/353 (4%)
Query: 145 EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNET 204
EP T K++ LY+ +N S+A L+ + ++ T + C LD
Sbjct: 58 EPNTFKILQKLYLYQ-NNPSLAYSYFTQLKNQHGFSHNIQTYTSIIRILCYYN-LDRKLD 115
Query: 205 CGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
LD P F +L ++L++ DV D YL N++N +
Sbjct: 116 SLFLDIIDHSKQDPCFEINVLF-DSLFEGVNDVNEDHYL-----------FNAFNGFVKA 163
Query: 265 FCKVNMMDRATEICREMRDRD-IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
NM A + + R I PN+++FN LI+ K EV L V G
Sbjct: 164 CVSQNMFVEAIDFLLQTRKNVVILPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIF 223
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
+++T+ +I LC+ +E+ + EM E GV ++ Y I LC +
Sbjct: 224 NEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVL 283
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
Q + Y + A+I+ FC K+++AE F M GL PD + Y AL+ S
Sbjct: 284 QDYRTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNS 343
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
FD+A + SM G + + IL L + GR E D+ + KE G+
Sbjct: 344 RNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGL 396
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 67/134 (50%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ + PS +Y+ + AL + +++ A+ F PD TY I+I+G C+ + E
Sbjct: 575 MNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPE 634
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L K M+ G P+ TYTI+I+G+C + E + + MKER + P+ ++
Sbjct: 635 AHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIK 694
Query: 124 GVFRCLDPHKAFEL 137
G+ AF+L
Sbjct: 695 GLLNSGHTEIAFQL 708
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P Y +I+ K+N + A+ F+ M PD TY I+I+G C++ + EA
Sbjct: 611 GFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREA 670
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
L K M+ G P+V YT++I G N+ F++ M + + P R +
Sbjct: 671 HELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGMTPGATLKRCI 727
>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
Length = 573
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 210/455 (46%), Gaps = 39/455 (8%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS NA++ ALV+++ +DLA F+ + PD+FT+NI+I G+C+ G + +A +
Sbjct: 151 PSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAGDV 210
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN---VCPNEATVRSLVHG 124
K M G G P+V TY LIDG+ R +++ V ++KE N + PN T L++G
Sbjct: 211 AKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLING 270
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A ++ + + +L+ L ++ ++ +M + G
Sbjct: 271 YCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELG---- 326
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
L T LN +L+ F K+G+ VE + +++
Sbjct: 327 ----------LATLPTLNS---VLNGFCKKGMM-------------------VEAEGWVD 354
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + NV +YN +ID + ++ M AT M + I+P++ T+N LI+G
Sbjct: 355 GMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTST 414
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ LL + E G K D T+N +I LC A+ L EMVE G+ P TYN
Sbjct: 415 DWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYN 474
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I C GD + + +M+ + ++ T N ++ FC+M K+++A ML
Sbjct: 475 AIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEK 534
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
GL P+ +Y + +I+ G + + + +N
Sbjct: 535 GLVPNRITYEIINSGMIEKGYVPDIRGYAADVSKN 569
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 196/463 (42%), Gaps = 35/463 (7%)
Query: 19 ALVKSNSIDLAYLKFQQMSVD--QCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGY 76
AL +++ AY F D + +P F+ N L+ + R VD A R +
Sbjct: 125 ALARASQPLAAYGAFLLAGADYPRYRPSAFSVNALLAALVRADRVDLAERAFRAALRRRV 184
Query: 77 APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFE 136
+P+ +T+ I+I G C ++ + V + M+ + P+ T +L+ G ++ K +
Sbjct: 185 SPDKFTFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYH 244
Query: 137 LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLV 196
+ + +L++M G P TF+ +
Sbjct: 245 VDM--------------------------------LLKEMNQAGISPNVVTFNVLINGYC 272
Query: 197 TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVN 256
++ + + + G+ TY L+ L + G+ VE L ++ ++ +
Sbjct: 273 KESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGK-VEDSMKLVEEMEELGLATLP 331
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+ N V++ FCK MM A M + + PN+VT+NTLI G+ + ++ + +
Sbjct: 332 TLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAM 391
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
G PD T+N +I + + L EM E GV + +TYN+LI +LC G+V
Sbjct: 392 AGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEV 451
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
++++L +M + P T+NA+I FC + A M R + + +
Sbjct: 452 RKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNVF 511
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+K K G+ DEA M + G P+ T +I ++++G
Sbjct: 512 LKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKG 554
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 153/351 (43%), Gaps = 37/351 (10%)
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK---AGRDVEG 239
P+ TF+ ++ L L + + G+ P TY L++ YK AG+
Sbjct: 186 PDKFTFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHV 245
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF------ 293
D L + + + NV ++N++I+ +CK + + A ++ EMR I N+VT+
Sbjct: 246 DMLLKEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSG 305
Query: 294 ----------------------------NTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
N++++G CK + + + + + G KP+
Sbjct: 306 LCREGKVEDSMKLVEEMEELGLATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNV 365
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T+N++ID R + ++A M G+ P+ TYN LI D L +
Sbjct: 366 VTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDE 425
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M+ + D+ T+N LI + C ++ KA K M+ +GL P + +Y+A+I + G
Sbjct: 426 MKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGD 485
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
A + ME+ + T N+ L+ + G+ +EA+ ++ E+G+
Sbjct: 486 AKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGL 536
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 126/280 (45%), Gaps = 37/280 (13%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
++N+VI CK + +A ++ ++MR + P++VT+NTLI G+ K K + ++L
Sbjct: 190 TFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLL 249
Query: 317 LE---CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
E G P+ TFN +I+ C+ A+ EM + G+P N +TY L+ LC
Sbjct: 250 KEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCRE 309
Query: 374 GDVARSLRLFQKMQ----------------------------------ADRISPDIYTFN 399
G V S++L ++M+ + P++ T+N
Sbjct: 310 GKVEDSMKLVEEMEELGLATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYN 369
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI + R+ K+++A A +M G+ PD +Y+ LI S + M++
Sbjct: 370 TLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKET 429
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
G D T N+++ L +G +A ++ E G+ K
Sbjct: 430 GVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPK 469
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 152/328 (46%), Gaps = 6/328 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAY---LKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
G+ PS YN +ID K Y + ++M+ P+ T+N+LI+G C+ +
Sbjct: 218 GLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLINGYCKESNI 277
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
A+++ ++M G N+ TYT L+ G C +V + +++E M+E + T+ S+
Sbjct: 278 TAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLA-TLPTLNSV 336
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRG 180
++G + +A E + M ++ + +V NTL+ EA A M +G
Sbjct: 337 LNGFCKKGMMVEA-EGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKG 395
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T++ +T T D G+LD + GVK TY +L+ AL G +
Sbjct: 396 ISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAV 455
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ L+ + + L +YN +I+ FC+ A +I M N+VT N +
Sbjct: 456 KLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYF 515
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTF 328
CK ++ + +L +LE G P++ T+
Sbjct: 516 CKMGKMDEANVVLNEMLEKGLVPNRITY 543
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
R P ++ NAL+ + R ++++ AE+AF + L + PD F+++ +I L K+G+ +A
Sbjct: 148 RYRPSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKA 207
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI---VKTSKERGIS 497
M G P T N +++ + GR + + + +K + GIS
Sbjct: 208 GDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGIS 258
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 50/122 (40%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ YN +I AL + A +M +P TYN +I+G C G A
Sbjct: 430 GVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGA 489
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +ME NV T + + FC ++ E VL M E+ + PN T + G
Sbjct: 490 HDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSG 549
Query: 125 VF 126
+
Sbjct: 550 MI 551
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P R YNA+I+ + A+ +M + + + T N+ + C++G +DE
Sbjct: 464 VGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDE 523
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV 99
A ++ +M G PN TY I+ G V ++
Sbjct: 524 ANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPDI 559
>gi|449435418|ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
gi|449494962|ref|XP_004159696.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
Length = 514
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 203/436 (46%), Gaps = 1/436 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S + Y+ I AL + + L + M PD + +NI ++ + R +++ A
Sbjct: 74 GFSLTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELA 133
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M G P+V TYTI++D C AK+ + M + + P+ +LV G
Sbjct: 134 LKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVG 193
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A+EL + M+ E L+ N+L+ + S+A AI M G P+
Sbjct: 194 LCDGGKVDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPD 253
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + GL L + + G++P +Y L++ L KA R + + +N
Sbjct: 254 LITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMN 313
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+++ L V SYN VI CK +A + EM +D+AP++ TF TLI +
Sbjct: 314 TMWEKGLCDTV-SYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEG 372
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
H + LL + + PD + +++D C+ + E A +M+E G+ P+ ++YN
Sbjct: 373 SPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYN 432
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI LC V+ ++ L+++MQ PD TF +I R ++ A + + M+
Sbjct: 433 ALINGLCKASKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEK 492
Query: 425 GLRPDNFSYSALIKAL 440
G D F LIKA+
Sbjct: 493 GYTLDKFLSETLIKAI 508
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/497 (25%), Positives = 218/497 (43%), Gaps = 15/497 (3%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM 71
++ A I VK ID A F +M+ C YN I + D A +M
Sbjct: 11 VFRASITKCVKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYYSRM 70
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
G++ +TY+ I C K + R+LE MK+ P+ ++ +FR
Sbjct: 71 IPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFR---- 126
Query: 132 HKAFELLIRFME------REPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMGDRGYLPE 184
EL ++F + REP +V T++ RL +A R M ++G P+
Sbjct: 127 ENLLELALKFFDEMVAKGREP---DVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPD 183
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
V L G ++ + +K +K + LM K+GR + +
Sbjct: 184 MKACTALVVGLCDGGKVDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKS 243
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ K ++ +YN++++ FC M++ A + ++M + P++ ++N L+ G CK
Sbjct: 244 FMSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKAN 303
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ K +L+ + E G D ++N++I LC++ A EM + V P+ T+
Sbjct: 304 RLDKAYKLMNTMWEKGL-CDTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFA 362
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI++ G + L Q M + PD+ + ++ FC+ KIE A+ F M+ +
Sbjct: 363 TLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEI 422
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ PD SY+ALI L K+ + EA + M+ GC PD T LI+ L+++ A
Sbjct: 423 GISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLA 482
Query: 485 HDIVKTSKERGISFKSF 501
+ E+G + F
Sbjct: 483 CQVWDQMMEKGYTLDKF 499
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GISP YNA+I+ L K++ + A L +++M + C PD T+ ++I G+ R +
Sbjct: 422 IGISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSL 481
Query: 64 ALRLVKQMEGLGYAPNVYTYTILI 87
A ++ QM GY + + LI
Sbjct: 482 ACQVWDQMMEKGYTLDKFLSETLI 505
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 72/174 (41%)
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
++ F + I + ++A+ EM + P + YN I L + + +
Sbjct: 8 NRLVFRASITKCVKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYY 67
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+M S +T++ I + C + + M LG PD ++++ + L +
Sbjct: 68 SRMIPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRE 127
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ A + F M G PD T +I++ L + ++++A + + +G+S
Sbjct: 128 NLLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLS 181
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 210/443 (47%), Gaps = 45/443 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ ISP+ +N VI A+ K +D A F+ M++ +C+PD +TY L+ G+C+ +DE
Sbjct: 193 VSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDE 252
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+ +M+ G P+ T+ +LI+G C ++ ++++ M + PNE T +L+H
Sbjct: 253 AVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIH 312
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ KA LL R + + + + T++ L A + A +L M +RGY
Sbjct: 313 GLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGY-- 370
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+Y + L++G L+K G+ E
Sbjct: 371 --CVNEYVYSTLISG-------------------------------LFKEGKSQEA---- 393
Query: 244 NHVFKDRLVS----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
H+FK+ V N Y+ VID C+ D A E+ EM ++ PN T ++L+ G
Sbjct: 394 MHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKG 453
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ H+ E+ + + F ++ ++ +I LC+ + ++A+ ++M+ G P+
Sbjct: 454 FFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPD 513
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKM--QADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
+ Y+ +I L G V +++L+ +M Q PD+ T+N L+ + C+ + I +A
Sbjct: 514 VVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDL 573
Query: 418 FFSMLTLGLRPDNFSYSALIKAL 440
SML G PD + + ++ L
Sbjct: 574 LNSMLDRGCDPDLVTCTIFLRML 596
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 214/490 (43%), Gaps = 45/490 (9%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVD-QCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
++ A A + ++DL F +M+ + +CK ++N +++ I + G+ AL
Sbjct: 131 IFKAYGKAHLPEKAVDL----FDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNH 186
Query: 71 M---EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +G+ +PNV T+ ++I C V + +V M R P+ T +L+ G
Sbjct: 187 VIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDG--- 243
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
L EA ++L +M G P T
Sbjct: 244 --------------------------------LCKADRIDEAVSLLDEMQIDGCFPSPVT 271
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
F+ + L DL+ ++D +G P TY L+ L G+ + L+ +
Sbjct: 272 FNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMV 331
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ V NV +Y +I+ K + M +R N ++TLISG K+ +
Sbjct: 332 SSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQ 391
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ L + G++ + ++++ID LCR + +DA++ LSEM G PN T + L+
Sbjct: 392 EAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLM 451
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+ G+ R++ +++ M + + ++ LI C+ K+++A + ML G +
Sbjct: 452 KGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCK 511
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG--CNPDSYTSNLILETLVQQGRFEEAH 485
PD +YS++I L +G ++A Q + M G PD T N++L TL +Q A
Sbjct: 512 PDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAI 571
Query: 486 DIVKTSKERG 495
D++ + +RG
Sbjct: 572 DLLNSMLDRG 581
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 186/438 (42%), Gaps = 37/438 (8%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P+ T+N++I +C++G+VD+A+++ + M P+VYTY L+DG C A R+ E +
Sbjct: 197 PNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSL 256
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
L+ M+ P+ T N L+ L
Sbjct: 257 LDEMQIDGCFPSPVTF-----------------------------------NVLINGLCK 281
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
S AA ++ M +G +P T++ + L L + +LD + P T
Sbjct: 282 KGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVT 341
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y ++ L K GR ++G L + + N Y+ +I K A + +EM
Sbjct: 342 YGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMT 401
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+ N + ++ +I G C+D + E+L + G P+ +T +S++ A
Sbjct: 402 VKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSH 461
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
A++ +M + N + Y++LI LC G V ++ ++ +M PD+ ++++I
Sbjct: 462 RAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMI 521
Query: 403 QSFCRMNKIEKAEKAFFSMLTLG--LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
+E A + + ML G +PD +Y+ L+ L K A SM G
Sbjct: 522 NGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRG 581
Query: 461 CNPDSYTSNLILETLVQQ 478
C+PD T + L L ++
Sbjct: 582 CDPDLVTCTIFLRMLREK 599
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 205/470 (43%), Gaps = 51/470 (10%)
Query: 27 DLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTIL 86
D A F+++ P+ TYN+LI G C+ G + +A+ + M+ G PN T L
Sbjct: 7 DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 66
Query: 87 IDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREP 146
+ G C +++ ++ M+ P A+ L+ G F
Sbjct: 67 LLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFF-------------------- 106
Query: 147 LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
MA A ++M G P+ ++ ++ L + E
Sbjct: 107 ------------------MAGRAIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHA 148
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+ F P TY +LM+ K G+ E + + K NV +Y+++I+C+C
Sbjct: 149 L---FSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYC 205
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K++ ++ A E+ +M + + PN VTFNTLI+G CK + +L + + G K
Sbjct: 206 KLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIV 265
Query: 327 TFNSMIDCLCRAH-RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T+N++ID LC+ A+D +++ G+ P +TYN LI+ + LRL
Sbjct: 266 TYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERAN--DGLRLLCH 323
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M A+ PD+ T+N LI C N++E A++ F M P+ +++ LI+ L +
Sbjct: 324 MHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQKK 380
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+EA+ M PD T N I+ + G +A +++K + G
Sbjct: 381 VEEARNILDRMTA----PDMTTFNTIILAFCKAGAMHDAREVMKDMLKHG 426
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 190/444 (42%), Gaps = 68/444 (15%)
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
D+ALRL K++ +APN +TY +LI GFC ++ + V MK + PN +T+ +L
Sbjct: 7 DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 66
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ G+ A +L R M+ P + +L R MA A ++M G
Sbjct: 67 LLGLCEIGQMSSALKLF-REMQAGPFLPTSASHNILLR--GFFMAGRAIEFFKEMKASGV 123
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P+ ++ ++ L + E + F P TY +LM+ K G+ E
Sbjct: 124 EPDLESYHILLSALSDSGRMAEAHAL---FSAMTCSPDIMTYNVLMDGYCKIGQTYEAQS 180
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + K NV +Y+++I+C+CK++ ++ A E+ +M + + PN VTFNTLI+G C
Sbjct: 181 LMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFC 240
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR------------------------ 337
K + +L + + G K T+N++ID LC+
Sbjct: 241 KAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTI 300
Query: 338 ----------AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+ R D L L M G P+ ITYN LI LC+ V + RLF M
Sbjct: 301 VTYNSLIQGFSERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMA 360
Query: 388 A---------------------------DRIS-PDIYTFNALIQSFCRMNKIEKAEKAFF 419
DR++ PD+ TFN +I +FC+ + A +
Sbjct: 361 CAPNVTTFNFLIRGLCAQKKVEEARNILDRMTAPDMTTFNTIILAFCKAGAMHDAREVMK 420
Query: 420 SMLTLGLRPDNFSYSALIKALIKS 443
ML G P+ ++ AL + S
Sbjct: 421 DMLKHGFYPNTYTTYALAHGIQSS 444
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 190/402 (47%), Gaps = 20/402 (4%)
Query: 92 NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL 151
+A++ + R+ + + PN T L+ G + H+A + L
Sbjct: 2 SARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAS 61
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
NTLL L S A + R+M +LP S++ + L+ G + G F
Sbjct: 62 TMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNI----LLRGFFM---AGRAIEF 114
Query: 212 IKR----GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
K GV+P +Y +L+ AL +GR E + + ++ +YN+++D +CK
Sbjct: 115 FKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCK 171
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+ A + +E+ PN+ T++ +I+ +CK +V + E+ + ++E P+ T
Sbjct: 172 IGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVT 231
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI-GDVARSLRLFQKM 386
FN++I C+A EDA+ +EM + G +TYN LI SLC G V ++ LF K+
Sbjct: 232 FNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKL 291
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ ++P I T+N+LIQ F + + M G +PD +Y+ LI L + R
Sbjct: 292 EGAGLTPTIVTYNSLIQGFSE--RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRV 349
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
++A++ F M C P+ T N ++ L Q + EEA +I+
Sbjct: 350 EDAQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNIL 388
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 153/329 (46%), Gaps = 23/329 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y+ ++ AL S + A+ F M+ C PD TYN+L+ G C+IG EA
Sbjct: 122 GVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEA 178
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+K++ GY PNV+TY+I+I+ +C +V E + V M E N PN T +L+ G
Sbjct: 179 QSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAG 238
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQK---LVCNTLLYRL-SNNSMASEAAAILRKMGDRG 180
+ A +L F E E + K + NTL+ L A + K+ G
Sbjct: 239 FCKAGMLEDAIKL---FAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAG 295
Query: 181 YLPESSTFDYTVTCLVTGLD--LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
P T++ L+ G N+ +L G KP TY L+ L A R +
Sbjct: 296 LTPTIVTYN----SLIQGFSERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVED 351
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
R N + NV ++N +I C + E R + DR AP++ TFNT+I
Sbjct: 352 AQRLFNGM---ACAPNVTTFNFLIRGLCA----QKKVEEARNILDRMTAPDMTTFNTIIL 404
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFT 327
CK +H RE++ +L+ GF P+ +T
Sbjct: 405 AFCKAGAMHDAREVMKDMLKHGFYPNTYT 433
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ +P+ +N +I L ++ A +M+ PD T+N +I C+ G + +
Sbjct: 359 MACAPNVTTFNFLIRGLCAQKKVEEARNILDRMTA----PDMTTFNTIILAFCKAGAMHD 414
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAK 94
A ++K M G+ PN YT L G ++K
Sbjct: 415 AREVMKDMLKHGFYPNTYTTYALAHGIQSSK 445
>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 137/518 (26%), Positives = 222/518 (42%), Gaps = 56/518 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGI + + + +I V+ + +D A F++M PD Y+ LI G+C +++
Sbjct: 297 LGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEK 356
Query: 64 ALRLVKQMEGLGYAPNVYT---------------------------------YTILIDGF 90
AL L+ +M+ LG P++ Y +++G
Sbjct: 357 ALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGL 416
Query: 91 CNAKRVAEVFRVLEIMKERN----------------VCPNEATVRSLVHGVFRCLDPHKA 134
N K V + + +L M N V P+ + ++ G+ A
Sbjct: 417 VNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLA 476
Query: 135 FELLIRFMEREPLTQK-LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
L R M R Q L+ N L+ +LSN++ E +L++M G+ P T +
Sbjct: 477 LSLF-RDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFG 535
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
CL D+ ++ G +P Y LL++ L K R E +L + ++ +
Sbjct: 536 CLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLP 595
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
++ +Y+ ID F K+ +D+A EI R++ R P++V +NTLI+G CK V + ++L
Sbjct: 596 DIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDIL 655
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++ G P T+N +ID C+ + A CLS MV PN ITY LI LC
Sbjct: 656 DEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNA 715
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR--PDNF 431
G ++ L+ +M+ SP+ +F ALI C+ + A F M G R PD
Sbjct: 716 GRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREM---GERETPDTI 772
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
Y ALI + I + A + M G PD N
Sbjct: 773 VYVALITSFISNKNPTLAFEILKEMVAKGKFPDPLDKN 810
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 209/479 (43%), Gaps = 18/479 (3%)
Query: 22 KSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVY 81
K +D A+ ++M + + T+ +LIHG R VD+AL+L K+M+ G+AP+V
Sbjct: 280 KCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVS 339
Query: 82 TYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF 141
Y LI G C K + + +L MKE + P+ + L+ +D ++ E +
Sbjct: 340 VYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIEERLED 399
Query: 142 MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL----------------PES 185
++ E + L+ N++L L N +A +LR M Y P++
Sbjct: 400 LDTEAML--LLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDT 457
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
++F + L L+ + ++ G K Y L++ L + R E L
Sbjct: 458 TSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKE 517
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++N + C C+ + A ++ REMR P + + L+ CK
Sbjct: 518 MKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKR 577
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ L ++ GF PD +++ ID + + AL+ ++ G P+ + YN
Sbjct: 578 SAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNT 637
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI C + V+ + + +M A + P + T+N LI +C+ I++A M+
Sbjct: 638 LINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKE 697
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
P+ +Y+ LI L +GR D+A + M GC+P+ + ++ L + G + A
Sbjct: 698 REPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAA 756
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 217/491 (44%), Gaps = 15/491 (3%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P++ +N +++A+ KS SIDL ++ ++M +PD++T ++ C D+AL +
Sbjct: 197 PNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSV 256
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ G G+ + +IL+ F V + F ++E M++ + NE T L+HG R
Sbjct: 257 FNEIYGRGWVDG-HVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVR 315
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
KA +L + + V + L+ L +A +L +M + G P+
Sbjct: 316 QSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQI 375
Query: 188 FDYTVTCLVTGLDL----NETCGILDTFIKRGVKPRFSTYLLLMEALYKAG---RDVEGD 240
+ +D+ E LDT + L+ +++ KA R + GD
Sbjct: 376 LSKLIAYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGD 435
Query: 241 RYLNH-------VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
Y ++ + K+ + + S+++VID C +D A + R+M N++ +
Sbjct: 436 NYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLY 495
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
N LI + + LL + GF+P +FT NS+ CLCR ALD + EM
Sbjct: 496 NNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRV 555
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
G P Y +L++ LC A + +M + PDI ++A I F ++ +++
Sbjct: 556 HGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQ 615
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A + F + G PD +Y+ LI K R EA M G P T NL+++
Sbjct: 616 ALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLID 675
Query: 474 TLVQQGRFEEA 484
+ G ++A
Sbjct: 676 GWCKNGDIDQA 686
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 149/369 (40%), Gaps = 48/369 (13%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G + LYN +ID L SN ++ YL ++M +P +FT+N + +CR V
Sbjct: 486 VGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTG 545
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL +V++M G+ P + YT+L+ C KR AE L M P+ + +
Sbjct: 546 ALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAID 605
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + +A E I R + RGY P
Sbjct: 606 GFVKIKAVDQALE-----------------------------------IFRDICARGYCP 630
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + ++E ILD + +G+ P TY LL++ K G + L
Sbjct: 631 DVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCL 690
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK- 302
+ + NV +Y +ID C D A + EMR + +PN ++F LI G CK
Sbjct: 691 SRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKC 750
Query: 303 ---DAEVHKTRELLVMLLECGFK--PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
DA + RE+ G + PD + ++I A + L EMV G
Sbjct: 751 GWPDAALLYFREM-------GERETPDTIVYVALITSFISNKNPTLAFEILKEMVAKGKF 803
Query: 358 PNTITYNIL 366
P+ + N L
Sbjct: 804 PDPLDKNDL 812
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 87/174 (50%), Gaps = 1/174 (0%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P+ ++FN +++ + ++ + L EM + G P+ T ++++ C ++L +
Sbjct: 197 PNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSV 256
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
F ++ R D + + L+ +F + +++KA + M LG+R + ++ LI ++
Sbjct: 257 FNEIYG-RGWVDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVR 315
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
R D+A Q F M+++G PD + ++ L + E+A ++ KE GI
Sbjct: 316 QSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGI 369
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 89/179 (49%), Gaps = 4/179 (2%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLS-EMVEWGVPPNTITYNILIRSLCAIGDVAR 378
GF + +T+N+M CL A R L LS ++V + IR L + G V
Sbjct: 123 GFNHNCYTYNAMASCLSHA-RQNAPLSLLSMDIVNSRCAMSPGALGFFIRCLGSTGLVEE 181
Query: 379 SLRLFQKMQADRIS-PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+ LF +++ R+ P+ Y+FN L+++ + I+ E M G PD ++ ++++
Sbjct: 182 ANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVL 241
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+A S +FD+A F + G D + ++++ T + G ++A ++++ ++ GI
Sbjct: 242 QAYCNSRKFDKALSVFNEIYGRGW-VDGHVLSILVLTFSKCGEVDKAFELIERMEDLGI 299
>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 809
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/531 (24%), Positives = 235/531 (44%), Gaps = 57/531 (10%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
++ +A+I V S D A+ Q P + N L++ + VD A+ + +
Sbjct: 149 VQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYR 208
Query: 70 QMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
Q++ G PN YTYTI I GFC +AE V M+E V PN + + + G+ CL
Sbjct: 209 QLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGL--CL 266
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE-----AAAILRKMGDRGYLPE 184
H +L + ++ + + K+ + Y + SE A +ILR+M +G+ P+
Sbjct: 267 --HGRSDLGFKVLQ-DVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPD 323
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
Y L++G +L + + D + +GVK +++ L + G E
Sbjct: 324 V----YVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVA 379
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
K + + YN+V+D CK+ ++ A E+ EM+ + + P+++ + T+ISG+
Sbjct: 380 NQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGY 439
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+V + + + G KPD T+N + R ++AL L+ M GV P+T
Sbjct: 440 FLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDT 499
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA------ 414
+T+N++I LC G V + F ++ + ++A++ +C N + KA
Sbjct: 500 VTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLE----NYSAMVNGYCEANHVNKAFALLIR 555
Query: 415 ---------EKAFF--------------------SMLTLGLRPDNFSYSALIKALIKSGR 445
+ +FF +M+ L + P YS +I AL ++G
Sbjct: 556 LSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGE 615
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++A+ F + G PD T +++ + + +EA ++ K RGI
Sbjct: 616 MEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGI 666
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 209/418 (50%), Gaps = 29/418 (6%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI YN V+DAL K ++ A +M + PD Y +I G G V +
Sbjct: 388 MGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVD 447
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL + ++M+ +G+ P++ TY +L GF E +L M+ + V P+ T ++
Sbjct: 448 ALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIE 507
Query: 124 G--VFRCLDPHKAFELLIRFMEREPLTQKLVCN--TLLYRLSNNSMASEAAAILRKMGDR 179
G + +D +AF + L +K + N ++ + ++A A+L ++ +
Sbjct: 508 GLCIGGKVDDAQAF--------FDNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQ 559
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G + + ++F + L + D + +L+T + + P Y ++ AL++AG ++E
Sbjct: 560 GRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAG-EMEK 618
Query: 240 DRYLNHVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+Y+ ++ DR L +V +Y ++I+ +C++N M A + +M++R I P+++T+ L++
Sbjct: 619 AQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLN 678
Query: 299 GHCK--------DAEVHKTRE-------LLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
K + K++E L + + KPD + +ID C+ + +D
Sbjct: 679 NCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQD 738
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
A++ +EM++ G+ P+T+TY L+ C +G++ +++ LF +M I PD +T + L
Sbjct: 739 AINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/552 (21%), Positives = 232/552 (42%), Gaps = 89/552 (16%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P++ Y I+ L DL + Q + + D F Y ++I G C + EA
Sbjct: 249 GVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEA 308
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++++ME G+AP+VY Y LI G+C + + + + M + V N + S++ G
Sbjct: 309 ESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQG 368
Query: 125 VFR----------------------------CLDP-------HKAFELLIRFMEREPLTQ 149
+ + +D +A ELL+ ++ +
Sbjct: 369 LSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPD 428
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ T++ +A I R+M D G+ P+ T++ E +L+
Sbjct: 429 IINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLN 488
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+GVKP T+ +++E L G+ + + +++ +++ + N Y+ +++ +C+ N
Sbjct: 489 YMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNL-EEKCLEN---YSAMVNGYCEAN 544
Query: 270 MMDRA-----------------------TEICRE------------MRDRDIAPNLVTFN 294
+++A +C E M +I P ++ ++
Sbjct: 545 HVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYS 604
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
+I + E+ K + + ML++ G PD T+ MI+ CR ++ ++A L +M
Sbjct: 605 KVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNR 664
Query: 355 GVPPNTITYNILIRSLCAIG--------DVARSLR-------LFQKMQADRISPDIYTFN 399
G+ P+ ITY +L+ + I D +S L+ +M+ I PD+ +
Sbjct: 665 GIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYT 724
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI C+ N I+ A F M+ GL PD +Y+AL+ G +A F M
Sbjct: 725 VLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNK 784
Query: 460 GCNPDSYTSNLI 471
G PD++T +++
Sbjct: 785 GIRPDAHTMSVL 796
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/535 (24%), Positives = 224/535 (41%), Gaps = 103/535 (19%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P N +++ LV+S +D+A ++Q+ P+ +TY I I G CR G + EA
Sbjct: 179 GFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEA 238
Query: 65 LRLVKQMEGLGYAPN-----------------------------------VYTYTILIDG 89
+ + + ME G PN V+ YT++I G
Sbjct: 239 IDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRG 298
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
FC+ ++ E +L M+++ P+ +L+ G + KA L + + T
Sbjct: 299 FCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTN 358
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
++ +++L LS MASE A ++ G FD E C
Sbjct: 359 CVILSSILQGLSQMGMASEVANQFKEFKKMGIF-----FD-------------EAC---- 396
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC-FCKV 268
Y ++M+AL K G+ E L + ++V ++ +Y VI F K
Sbjct: 397 -------------YNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKG 443
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
++D A I REM+D P++VT+N L G ++ + LL + G KPD T
Sbjct: 444 KVVD-ALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTH 502
Query: 329 NSMIDCLCRAHRFEDA-----------LDCLSEMVEWGVPPNTI--TYNILIR------- 368
N +I+ LC + +DA L+ S MV N + + +LIR
Sbjct: 503 NMIIEGLCIGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRI 562
Query: 369 -----------SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
+LC+ GD ++L L + M A I+P + ++ +I + + ++EKA+
Sbjct: 563 LKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYV 622
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
F ++ GL PD +Y+ +I + + EA M+ G PD T ++L
Sbjct: 623 FNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLL 677
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 209/479 (43%), Gaps = 29/479 (6%)
Query: 24 NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV---VDEALRLVKQMEGLGYAPNV 80
N LA+ F Q+ D +TY ++ +C G +D L + + +G V
Sbjct: 71 NEPSLAFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIV 130
Query: 81 YTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV-HGVFRCLDPHKAFELLI 139
+ L DG N E F VL V ++A ++ V G+F +AF++L+
Sbjct: 131 NLFEALGDGIAN-----ESFSVL-------VQVSDALIKVCVASGMF-----DQAFDVLL 173
Query: 140 RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL 199
+ Q L CN L+ RL + A AI R++ G P DYT T + G
Sbjct: 174 QTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPN----DYTYTIAIKGF 229
Query: 200 ----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNV 255
+L E + + GV P +Y +E L GR G + L V ++ +V
Sbjct: 230 CRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDV 289
Query: 256 NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
+Y +VI FC + A I REM + AP++ + LISG+C + K L
Sbjct: 290 FAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDE 349
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
++ G K + +S++ L + + + E + G+ + YN+++ +LC +G
Sbjct: 350 MVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGK 409
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
V ++ L +M+ ++ PDI + +I + K+ A + M +G +PD +Y+
Sbjct: 410 VEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNV 469
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
L ++G EA ME G PD+ T N+I+E L G+ ++A +E+
Sbjct: 470 LAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEK 528
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%)
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
M D+A ++ + + AP +++ N L++ + +V + L G P+ +T+
Sbjct: 164 MFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYT 223
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
I CR +A+D +M E GV PN+ +Y I LC G ++ Q +
Sbjct: 224 IAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINA 283
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+I D++ + +I+ FC K+++AE M G PD + Y ALI G +A
Sbjct: 284 KIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKA 343
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
M G + + IL+ L Q G E + K K+ GI F
Sbjct: 344 LALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFF 392
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 78/186 (41%), Gaps = 13/186 (6%)
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
L E G+ D +T+ +++ LC L E+++ + + I + A+GD
Sbjct: 83 LKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIK---KDGNLDFGI-VNLFEALGD 138
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
+ + S + +ALI+ ++A G P S +
Sbjct: 139 ---------GIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNF 189
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
L+ L++S + D A + ++ G NP+ YT + ++ ++G EA D+ + +E G
Sbjct: 190 LMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESG 249
Query: 496 ISFKSF 501
++ SF
Sbjct: 250 VTPNSF 255
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 228/500 (45%), Gaps = 9/500 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S L + P++ Y A+ID K ++ Q+M P+ TY+ +I+G + G+
Sbjct: 369 LSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGI 428
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+DEA+ ++K+M PN Y Y ILIDG+C A + + MK + N
Sbjct: 429 LDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDV 488
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
LV+ + R +A ELL R L + +L+ S A ++ +M ++
Sbjct: 489 LVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEK- 547
Query: 181 YLPESSTFDY-TVTCLVTGL---DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
S FD T L+ GL E + I+ G+ P +TY ++++A K G
Sbjct: 548 ----SIPFDVVTYNVLINGLLEHGKYEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGEL 603
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
N + +++ + + N ++ + +++A + EM I PNLV L
Sbjct: 604 DNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVL 663
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
++ K + + ++ L++ G K ++ +N++I CR + A L M+ G
Sbjct: 664 LNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGF 723
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
+T+TYN LIR C V ++L + +M + +SP+I T+N L+ + + ++
Sbjct: 724 VADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDE 783
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
F M GL PD +Y LI K G E+ + + M G P + T N+++
Sbjct: 784 LFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFA 843
Query: 477 QQGRFEEAHDIVKTSKERGI 496
+ G+ ++A +++ + RG+
Sbjct: 844 KVGKMDQARELLNEMQVRGV 863
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 223/494 (45%), Gaps = 1/494 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ Y +ID+L K+ S A+ Q+ V D L+ G+ + E
Sbjct: 302 MGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKE 361
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + + + L PN TYT LIDG+C + V +L+ M+E+++ PN T S+++
Sbjct: 362 AEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIIN 421
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + +A ++ + +++ + V L+ A + +M G
Sbjct: 422 GYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKV 481
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ FD V L G ++E +L RG+ Y LM+ +KAG++ +
Sbjct: 482 NNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMV 541
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + +V +YN++I+ + + A + M + +APN T+N +I +CK
Sbjct: 542 EEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQ 600
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E+ EL + P T N+++ L A E A++ L+EM G+ PN + +
Sbjct: 601 GELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIH 660
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+L+ + G L++ +++ + + +N LI FCR+ +KA M+
Sbjct: 661 RVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIR 720
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G D +Y+ALI+ +S +A T+ M G +P+ T NL+L L+ G E
Sbjct: 721 DGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAE 780
Query: 484 AHDIVKTSKERGIS 497
++ KE G++
Sbjct: 781 RDELFDKMKENGLN 794
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/532 (22%), Positives = 235/532 (44%), Gaps = 64/532 (12%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ L+N +I + + +M P+ +T+N+L+H C++G + AL
Sbjct: 6 IVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILAL 65
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L++ ++ + TY +I GFC V + F L IM +++ C + T LV G
Sbjct: 66 DLLRNVD---VEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGF 122
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
R ++ + + NTL+ S A ++ +M G L +
Sbjct: 123 CRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDI 182
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN- 244
+++ L+ G F KRG + + LL E R V+ + N
Sbjct: 183 VSYN----TLING------------FCKRGEYDKAKS--LLHEI--SESRGVKDSVFFNI 222
Query: 245 --HVFKD---RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ KD L +++ +Y +I +CK + ++ A + EM P++VT++++++G
Sbjct: 223 DDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNG 282
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP-- 357
CKD + + +ELL + + G P+ + ++ID L +A +A C S++V G+
Sbjct: 283 LCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLD 342
Query: 358 ---------------------------------PNTITYNILIRSLCAIGDVARSLRLFQ 384
PN+ITY LI C +GD+ R L Q
Sbjct: 343 LVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQ 402
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+M+ I+P++ T++++I + + +++A ML + P+ + Y+ LI K+G
Sbjct: 403 EMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAG 462
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ + A + M+ +G ++ ++++ L + R +EA +++K RG+
Sbjct: 463 KQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGL 514
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/493 (23%), Positives = 207/493 (41%), Gaps = 14/493 (2%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ T YN VI + ++ A+ M D T NIL+ G CRIG+
Sbjct: 73 VEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGE 132
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
R++ + G +V + LIDG+C A ++ ++E M++ + + + +L++G
Sbjct: 133 RIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGF 192
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ + KA LL E + + N ++++ EA I Y
Sbjct: 193 CKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLIT-------YTTII 245
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
ST+ C GL+ E + + I G P TY ++ L K GR E L
Sbjct: 246 STY-----CKQHGLE--EARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLRE 298
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ K + N +Y +ID K A ++ R + +LV TL+ G K ++
Sbjct: 299 MKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSK 358
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ ++ L + P+ T+ ++ID C+ E L EM E + PN ITY+
Sbjct: 359 PKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSS 418
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+I G + ++ + +KM I P+ Y + LI +C+ K E A + M G
Sbjct: 419 IINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSG 478
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
L+ +N + L+ L + R DEA++ + G D +++ + G+ A
Sbjct: 479 LKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAAL 538
Query: 486 DIVKTSKERGISF 498
++V+ E+ I F
Sbjct: 539 NMVEEMTEKSIPF 551
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/518 (21%), Positives = 210/518 (40%), Gaps = 57/518 (11%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ +Y +ID K+ ++A + +M + K + +++L++ + R +DEA
Sbjct: 444 IIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAE 503
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNV-------------- 111
L+K + G + YT L+DGF A + + ++E M E+++
Sbjct: 504 ELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGL 563
Query: 112 --------------------CPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL 151
PN+AT ++ + + A EL + + +
Sbjct: 564 LEHGKYEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSI 623
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
CNTL+ LS +A +L +M G P + N + +
Sbjct: 624 TCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQL 683
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+ G+K Y L+ + + L ++ +D V++ +YN +I +C+ + +
Sbjct: 684 VDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHV 743
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
+A +M + ++PN+VT+N L+ G + + EL + E G PD T++++
Sbjct: 744 KKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTL 803
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
I + ++++ EMV G P T TYN+LI +G + ++ L +MQ +
Sbjct: 804 ISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGV 863
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
P T++ LI +C ++K PD L + L K R D AK
Sbjct: 864 PPSSSTYDILICGWCNLSK----------------HPD------LDRTLKKIYRTD-AKN 900
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
M G P T I T + G+ +A ++K
Sbjct: 901 LITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLK 938
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 162/361 (44%), Gaps = 14/361 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G++P+ YN +I A K +D A + +M + P T N L+ G+ G +++
Sbjct: 581 MGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEK 640
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ ++ +M +G PN+ + +L++ + + V ++ E + + + N+ +L+
Sbjct: 641 AMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIV 700
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
R KA +L ++M R+ V N L+ +S +A A +M + G
Sbjct: 701 VFCRLRMTKKATSVL-KYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVS 759
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T++ + L+ + E + D + G+ P STY L+ K G E R
Sbjct: 760 PNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRL 819
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC- 301
+ V ++YN++I F KV MD+A E+ EM+ R + P+ T++ LI G C
Sbjct: 820 YCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCN 879
Query: 302 --KDAEVHKT---------RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
K ++ +T + L+ + + GF P K T + R + DA L E
Sbjct: 880 LSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLKE 939
Query: 351 M 351
+
Sbjct: 940 I 940
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 59/305 (19%)
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K +V + +N +I F ++ + +I EM + PN+ T N L+ CK +
Sbjct: 3 KHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLI 62
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+L L + D T+N++I C+ A LS MV+ +TIT NIL+
Sbjct: 63 LALDL---LRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILV 119
Query: 368 RSLCAI-----------------------------------GDVARSLRLFQKMQADRIS 392
+ C I G+++ +L L ++M+ + +
Sbjct: 120 KGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLL 179
Query: 393 PDIYTFNALIQSFCRMNKIEKA--------------EKAFFSM-------LTLGLRPDNF 431
DI ++N LI FC+ + +KA + FF++ L L D
Sbjct: 180 SDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLI 239
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
+Y+ +I K +EA+ + M NG PD T + I+ L + GR EA ++++
Sbjct: 240 TYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREM 299
Query: 492 KERGI 496
K+ G+
Sbjct: 300 KKMGV 304
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M + + P + +N LI A G V++ ++ +M + P++YT N L+ ++C+M
Sbjct: 1 MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+ A + + + D +Y+ +I + G ++A M + D+ T N+
Sbjct: 61 L---ILALDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117
Query: 471 ILETLVQQG 479
+++ + G
Sbjct: 118 LVKGFCRIG 126
>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
Length = 798
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/501 (25%), Positives = 222/501 (44%), Gaps = 61/501 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSI-DLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P+T +YNAV+ LV S + LA + +M C P+R TYN+L+ G+C+ G +
Sbjct: 168 GCRPTTFVYNAVLRVLVASGGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVD 227
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL+L +M G PNV T+TIL+ CNA ++ E +L M+++ P+E T + +
Sbjct: 228 ALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLS 287
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +A E L E T V +G +GY
Sbjct: 288 GLCKAGRVDEAIERL----EALRRTGTFV-----------------------LGLKGY-- 318
Query: 184 ESSTFDYTVTCLVTGLDLNE------TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
+CL+ GL L C ++ + P Y +++ +AGR
Sbjct: 319 ---------SCLIDGLFLAGRYEEGFQC-YMEVLEQADFSPDIVLYTIMIRGCAEAGRID 368
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ + + + + R + YN ++ C +D A + EM ++ + T +I
Sbjct: 369 DAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMI 428
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
G CK V + ++ ++E G P T+N +ID L RAHR E+A +M E G
Sbjct: 429 HGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKM-EVGNN 487
Query: 358 P--------------NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
P ++ + L+ S+C G V ++ +L + + + PD+ T+N L+
Sbjct: 488 PSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLN 547
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
C++ ++ A + F + G D +Y LI +L+++ R+++A F + G P
Sbjct: 548 GLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTP 607
Query: 464 DSYTSNLILETLVQQGRFEEA 484
N I+ +L + + +A
Sbjct: 608 SLSIYNSIMRSLCRMNKLSQA 628
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/515 (24%), Positives = 221/515 (42%), Gaps = 65/515 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P+ + + ++ ++ + + A M C PD TYN + G+C+ G VDEA
Sbjct: 239 GITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEA 298
Query: 65 LRLVKQMEGLG-YAPNVYTYTILIDGFCNAKRVAEVFR-VLEIMKERNVCPNEATVRSLV 122
+ ++ + G + + Y+ LIDG A R E F+ +E++++ + P+ ++
Sbjct: 299 IERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMI 358
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G AF E+ NTLL L ++ A +++ +M +
Sbjct: 359 RGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVV 418
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG--- 239
+++T + L ++E + D ++ G P TY +L++ LY+A R E
Sbjct: 419 LDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARML 478
Query: 240 ----------DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
+L V + S ++D C+ + +A ++ R + D + P+
Sbjct: 479 FYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPD 538
Query: 290 LVTFNTLISGHCK----DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
+VT+NTL++G CK D + REL V GF D+ T+ ++ID L RAHR+ DA+
Sbjct: 539 VVTYNTLLNGLCKVRNLDGALRLFRELQVK----GFSLDEITYGTLIDSLLRAHRYNDAM 594
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+++ G P+ YN ++RSL
Sbjct: 595 TLFQDILHIGGTPSLSIYNSIMRSL----------------------------------- 619
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYS----ALIKALIKSGRFDEAKQTFLSMEQNGC 461
CRMNK+ +A +F L L+ N S A + + G DEA + + ++Q
Sbjct: 620 CRMNKLSQAINFWFDHL---LKKYNLSAQDEVIASARKKFEEGSLDEAVRELIKIDQEYG 676
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ +S + L L+Q R ++A I +E GI
Sbjct: 677 SVNSCPYTIWLIGLIQARRIDDALKIFHILEESGI 711
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 148/317 (46%), Gaps = 3/317 (0%)
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLV-TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEA 229
A R G+ G P + ++ + LV +G + + + + G P +TY +LM+
Sbjct: 159 AFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVPLALALYNRMVAAGCLPNRATYNVLMDG 218
Query: 230 LYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
L K G V+ + + + + + NV ++ +++ C + A + M D+ P+
Sbjct: 219 LCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPD 278
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECG-FKPDKFTFNSMIDCLCRAHRFEDALDCL 348
VT+N +SG CK V + E L L G F ++ +ID L A R+E+ C
Sbjct: 279 EVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCY 338
Query: 349 SEMVEWG-VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
E++E P+ + Y I+IR G + + F +M+ R +PD + +N L+++ C
Sbjct: 339 MEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCD 398
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
++ A M + D +++ +I L K DEA Q F M + GC+P T
Sbjct: 399 SGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMT 458
Query: 468 SNLILETLVQQGRFEEA 484
N++++ L + R EEA
Sbjct: 459 YNVLIDGLYRAHRLEEA 475
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 112/500 (22%), Positives = 194/500 (38%), Gaps = 50/500 (10%)
Query: 15 AVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG- 73
AV+ L+ +++ Y +P + LI G EA+ +MEG
Sbjct: 107 AVVPILLATDADAAMYDAIADAQAAGLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGE 166
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G P + Y V RVL + V P
Sbjct: 167 FGCRPTTFVYN-------------AVLRVL--VASGGVVP-------------------L 192
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A L R + L + N L+ L A +A + +M RG P T ++
Sbjct: 193 ALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLS 252
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK-DRLV 252
+ L E +L++ +G P TY + L KAGR E L + + V
Sbjct: 253 SMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFV 312
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDR-DIAPNLVTFNTLISGHCKDAEVHKTRE 311
+ Y+ +ID + + E+ ++ D +P++V + +I G + +
Sbjct: 313 LGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFA 372
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
+ E F PD F +N+++ LC + + A +SEM + V +T T+ I+I LC
Sbjct: 373 FFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLC 432
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM---------- 421
V ++++F M P + T+N LI R +++E+A F+ M
Sbjct: 433 KKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFL 492
Query: 422 -LTLGLR--PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
LTLG D+ S L+ ++ +SG+ +A + + +G PD T N +L L +
Sbjct: 493 RLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKV 552
Query: 479 GRFEEAHDIVKTSKERGISF 498
+ A + + + +G S
Sbjct: 553 RNLDGALRLFRELQVKGFSL 572
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 96/192 (50%), Gaps = 10/192 (5%)
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGD 375
++ G P++ T+N ++D LC+ DAL EM++ G+ PN T+ IL+ S+C G
Sbjct: 200 MVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQ 259
Query: 376 VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM-----LTLGLRPDN 430
+ + L M+ PD T+NA + C+ ++++A + ++ LGL+
Sbjct: 260 LKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLK--- 316
Query: 431 FSYSALIKALIKSGRFDEAKQTFLS-MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
YS LI L +GR++E Q ++ +EQ +PD +++ + GR ++A
Sbjct: 317 -GYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFD 375
Query: 490 TSKERGISFKSF 501
KE+ + +F
Sbjct: 376 EMKEKRFTPDTF 387
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 155/387 (40%), Gaps = 49/387 (12%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P T YN ++ AL S +D A +M+ + D T+ I+IHG+C+ +VDEA++
Sbjct: 383 TPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQ 442
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE---VFRVLEIMKE----------RNVCP 113
+ M +G P V TY +LIDG A R+ E +F +E+ N
Sbjct: 443 VFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVK 502
Query: 114 NEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAIL 173
+ +++ LV + + KA++LL M+ + + NTLL L A +
Sbjct: 503 DSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLF 562
Query: 174 RKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
R++ +G+ + T+ + L+ N+ + + G P S Y +M +L +
Sbjct: 563 RELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRM 622
Query: 234 GRDVEG-DRYLNHVFK---------------------------------DRLVSNVNS-- 257
+ + + + +H+ K D+ +VNS
Sbjct: 623 NKLSQAINFWFDHLLKKYNLSAQDEVIASARKKFEEGSLDEAVRELIKIDQEYGSVNSCP 682
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
Y + + + +D A +I + + I L C + + ++++ L
Sbjct: 683 YTIWLIGLIQARRIDDALKIFHILEESGIDITPACCAHLSKYLCWEKNLDSAVDVMLYTL 742
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDA 344
F + N ++ LC HR +DA
Sbjct: 743 NKRFIMSRHVGNRLLSSLCIRHRRKDA 769
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 15/138 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSV--------------DQCKPDRFTYN 49
+G P+ YN +ID L +++ ++ A + F +M V +Q K D +
Sbjct: 450 VGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVK-DSESLQ 508
Query: 50 ILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER 109
L+ +C+ G V +A +L++ + G P+V TY L++G C + + R+ ++ +
Sbjct: 509 KLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVK 568
Query: 110 NVCPNEATVRSLVHGVFR 127
+E T +L+ + R
Sbjct: 569 GFSLDEITYGTLIDSLLR 586
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 224/486 (46%), Gaps = 3/486 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS R Y+ ++ A K ++ ++M KP+ ++Y I I + + DEA
Sbjct: 315 GVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEA 374
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++ +ME G P+V T+T+LI C+A R+++ V MK+ + P+ T +L+
Sbjct: 375 YRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDK 434
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYLP 183
D E+ M+ + +V T ++ L EA + +M +G +P
Sbjct: 435 FGDNGDSQSVMEIW-NAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVP 493
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
E +++ ++ + + + G KP T++L + K+G ++ +
Sbjct: 494 EQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRY 553
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +V +V + N V+ K + A + E++ ++P+ +T+ +I K
Sbjct: 554 ELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKA 613
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + ++ ++E PD NS+ID L +A R ++A ++ E + P TY
Sbjct: 614 SKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTY 673
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L+ L G V + L ++M P++ T+N ++ C+ + A +SM T
Sbjct: 674 NTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTT 733
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G PD SY+ +I L+K R++EA F M++ PD T IL + V+ G +E
Sbjct: 734 KGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKE 792
Query: 484 AHDIVK 489
A I+K
Sbjct: 793 ALHIIK 798
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 149/552 (26%), Positives = 238/552 (43%), Gaps = 72/552 (13%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP T Y +I K++ D A F M + C PD N LI + + G DE
Sbjct: 594 MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDE 653
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A R+ Q++ + P TY L+ G +V EV +LE M N PN T +++
Sbjct: 654 AWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILD 713
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + + A ++L + + NT++Y L +EA +I +M + +P
Sbjct: 714 CLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIP 772
Query: 184 ESSTFDYTVTCLVTGLDLNETCGIL-DTFIKRGVKPRFSTYLLLMEA-LYKAG--RDVE- 238
+ +T + V + E I+ D F++ G K S+ LME L KAG + +E
Sbjct: 773 DYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEF 832
Query: 239 -----------GDRYL----NHVFKDR-------LVSNVNS---------YNMVIDCFCK 267
D +L H+ K + LV S YN +I
Sbjct: 833 AEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVD 892
Query: 268 VNMMDRATEICREMRDRDIAPN-----------------------------------LVT 292
N++D A + EM++ P+ VT
Sbjct: 893 ENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVT 952
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+NT+ISG K + + +L L+ GF P T+ ++D L +A R EDA + +EM+
Sbjct: 953 YNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEML 1012
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
E+G N YNIL+ G+ + LFQ M I+PDI ++ +I + C+ ++
Sbjct: 1013 EYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLN 1072
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
F +L +GL PD +Y+ LI L KS R +EA F M++ G P+ YT N ++
Sbjct: 1073 DGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLI 1132
Query: 473 ETLVQQGRFEEA 484
L + G+ EA
Sbjct: 1133 LHLGKAGKAAEA 1144
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 211/483 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + YN ++ LVKS A ++ M VD P TY++L+ + V+
Sbjct: 280 GIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETV 339
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+++ME G PNVY+YTI I AKR E +R+L M+ P+ T L+
Sbjct: 340 LWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQV 399
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A ++ + + + ++ TLL + +N + I M GY
Sbjct: 400 LCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDN 459
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + L + E + D ++G+ P +Y L+ KA R +
Sbjct: 460 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 519
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
H+ N ++ + I+ + K +A + M+ + I P++V N ++ G K
Sbjct: 520 HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG 579
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + L G PD T+ MI C +A +F++A+ +M+E P+ + N
Sbjct: 580 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVN 639
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI +L G + R+F +++ + P T+N L+ R K+++ M
Sbjct: 640 SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 699
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
P+ +Y+ ++ L K+G ++A SM GC PD + N ++ LV++ R+ EA
Sbjct: 700 NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 759
Query: 485 HDI 487
I
Sbjct: 760 FSI 762
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/534 (23%), Positives = 227/534 (42%), Gaps = 41/534 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y I L ++ D AY +M + CKPD T+ +LI +C G + +A
Sbjct: 350 GVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDA 409
Query: 65 -----------------------------------LRLVKQMEGLGYAPNVYTYTILIDG 89
+ + M+ GY NV YT +ID
Sbjct: 410 KDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDA 469
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C RV E + + MK++ + P + + SL+ G + A EL P
Sbjct: 470 LCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN 529
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ + + +A M +G +P+ + + L L +
Sbjct: 530 GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFH 589
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
GV P TY ++++ KA + E + + ++ V +V + N +ID K
Sbjct: 590 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAG 649
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
D A I ++++ ++ P T+NTL++G ++ +V + LL + + P+ T+N
Sbjct: 650 RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYN 709
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+++DCLC+ DALD L M G P+ +YN +I L + +F +M+
Sbjct: 710 TILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 769
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAE---KAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
I PD T ++ SF ++ +++A K +F L G + D S +L++ ++K
Sbjct: 770 LI-PDYATLCTILPSFVKIGLMKEALHIIKDYF--LQPGSKTDRSSCHSLMEGILKKAGI 826
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+++ + + +G D + +++ L +Q + EAH++VK K G+S K+
Sbjct: 827 EKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKT 880
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 218/497 (43%), Gaps = 45/497 (9%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ YN ++D L K+ +++ A M+ C PD +YN +I+G+ + +EA +
Sbjct: 703 PNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSI 762
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
QM+ + P+ T ++ F ++ + L I+K+ + P T RS H +
Sbjct: 763 FCQMKKV-LIPDYATLCTILPSFV---KIGLMKEALHIIKDYFLQPGSKTDRSSCHSLME 818
Query: 128 CLDPHKAFELLIRF-----------------------------MEREPLTQKL------- 151
+ E I F +E L +K
Sbjct: 819 GILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSL 878
Query: 152 ---VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
+ N+L+ L + ++ A + +M + G P+ T++ + + + + E +
Sbjct: 879 KTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQ 938
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
+ ++G + + TY ++ L K+ R + D Y N + +Y ++D K
Sbjct: 939 EEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN-LMSQGFSPTPCTYGPLLDGLLK 997
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
++ A + EM + N +N L++GH K L +++ G PD +
Sbjct: 998 AGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKS 1057
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+ +ID LC+A + D L +++E G+ P+ ITYN+LI L + ++ LF +MQ
Sbjct: 1058 YTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQ 1117
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
I P++YT+N+LI + K +A K + +LT G +P+ F+Y+ALI+ SG D
Sbjct: 1118 KKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTD 1177
Query: 448 EAKQTFLSMEQNGCNPD 464
A + M GC P+
Sbjct: 1178 SAYAAYGRMIVGGCLPN 1194
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 192/443 (43%), Gaps = 3/443 (0%)
Query: 51 LIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
L+ G R+G + E ++++ NV T+ + G + L +MKE
Sbjct: 224 LMRGHGRVGDMAEVFDVMQRQI---VKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAG 280
Query: 111 VCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA 170
+ N T LV+ + + +A E+ M + + L+
Sbjct: 281 IVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 340
Query: 171 AILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
+LR+M G P ++ + L +E IL G KP T+ +L++ L
Sbjct: 341 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 400
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
AGR + + K + +Y ++D F EI M+ N+
Sbjct: 401 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 460
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
V + +I C+ V + E+ + + G P+++++NS+I +A RF DAL+
Sbjct: 461 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 520
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M G PN T+ + I G+ ++++ ++ M++ I PD+ NA++ + +
Sbjct: 521 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 580
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+ A++ F + +G+ PD +Y+ +IK K+ +FDEA + F M +N C PD N
Sbjct: 581 LGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNS 640
Query: 471 ILETLVQQGRFEEAHDIVKTSKE 493
+++TL + GR +EA I KE
Sbjct: 641 LIDTLYKAGRGDEAWRIFYQLKE 663
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 218/498 (43%), Gaps = 10/498 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P NAV+ L KS + +A F ++ PD TY ++I + DEA
Sbjct: 560 GIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEA 619
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ M P+V LID A R E +R+ +KE N+ P + T +L+ G
Sbjct: 620 VKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAG 679
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R + LL + NT+L L N ++A +L M +G +P+
Sbjct: 680 LGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPD 739
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S+++ + LV NE I +K+ + P ++T ++ + K G E
Sbjct: 740 LSSYNTVIYGLVKEERYNEAFSIF-CQMKKVLIPDYATLCTILPSFVKIGLMKEA----L 794
Query: 245 HVFKDRLV-----SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
H+ KD + ++ +S + +++ K ++++ E + I + LI
Sbjct: 795 HIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKH 854
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK + + EL+ G +NS+I L + + A +EM E G P+
Sbjct: 855 LCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPD 914
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
TYN+L+ ++ + L++ ++M T+N +I + ++E+A ++
Sbjct: 915 EFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYY 974
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
++++ G P +Y L+ L+K+GR ++A+ F M + GC + N++L G
Sbjct: 975 NLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAG 1034
Query: 480 RFEEAHDIVKTSKERGIS 497
E+ + + ++GI+
Sbjct: 1035 NTEKVCHLFQDMVDQGIN 1052
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 196/461 (42%), Gaps = 37/461 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN VI LVK + A+ F QM PD T ++ +IG++ EA
Sbjct: 735 GCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEA 793
Query: 65 LRLVKQ-----------------MEGL----------GYAPNVYTYTILIDGF------- 90
L ++K MEG+ +A + + I +D F
Sbjct: 794 LHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIK 853
Query: 91 --CNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
C K+ E +++ K V SL+ G+ A L E
Sbjct: 854 HLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGP 913
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
+ N LL + + E + +M +GY T++ ++ LV L + +
Sbjct: 914 DEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLY 973
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ +G P TY L++ L KAGR + + N + + +N YN++++
Sbjct: 974 YNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIA 1033
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
++ + ++M D+ I P++ ++ +I CK +++ LLE G +PD T+
Sbjct: 1034 GNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITY 1093
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N +ID L ++ R E+A+ +EM + G+ PN TYN LI L G A + ++++++
Sbjct: 1094 NLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLT 1153
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
P+++T+NALI+ + + A A+ M+ G P+
Sbjct: 1154 KGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 167/379 (44%), Gaps = 39/379 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G+S T LYN++I LV N ID+A F +M C PD FTYN+L+ + + ++E
Sbjct: 874 FGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEE 933
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L++ ++M GY TY +I G ++R+ + + + + P T L+
Sbjct: 934 MLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLD 993
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL--YRLSNNSMASEAAAILRKMGDRGY 181
G+ + A L +E + N LL +R++ N+
Sbjct: 994 GLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNT----------------- 1036
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+ C + + +G+ P +Y ++++ L KAG+ +G
Sbjct: 1037 --------------------EKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLT 1076
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
Y + + L ++ +YN++ID K ++ A + EM+ + I PNL T+N+LI
Sbjct: 1077 YFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLG 1136
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + + ++ LL G+KP+ FT+N++I + + A M+ G PN+
Sbjct: 1137 KAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSS 1196
Query: 362 TYNILIRSLCAIGDVARSL 380
T + S A+G V + +
Sbjct: 1197 TDSSNCSSPEAVGTVRKQI 1215
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 151/337 (44%), Gaps = 16/337 (4%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLV-TGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
A L M + G + + T++ V LV +G D E + + GV P TY +LM
Sbjct: 269 APVALPVMKEAGIVLNAYTYNGLVYFLVKSGFD-REALEVYRVMMVDGVVPSVRTYSVLM 327
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
A K RDVE +L + V NV SY + I + D A I +M +
Sbjct: 328 VAFGKR-RDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGC 386
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P+++T LI C + +++ + + KPD+ T+ +++D +F D D
Sbjct: 387 KPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLD------KFGDNGD 440
Query: 347 CLSEMVEW------GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
S M W G N + Y +I +LC +G V +L +F +M+ I P+ Y++N+
Sbjct: 441 SQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNS 500
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI F + ++ A + F M G +P+ +++ I KSG +A Q + M+ G
Sbjct: 501 LISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKG 560
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
PD N +L L + GR A + K G+S
Sbjct: 561 IVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVS 597
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 124/271 (45%), Gaps = 1/271 (0%)
Query: 226 LMEALYKAGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
++ AL A E +R+ + K R+ S N +++ + E+ M+ +
Sbjct: 185 VIHALRSADGPAEALERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQ 244
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
+ N+ TF + G + + L ++ E G + +T+N ++ L ++ +A
Sbjct: 245 IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREA 304
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
L+ M+ GV P+ TY++L+ + DV L L ++M+A + P++Y++ I+
Sbjct: 305 LEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRV 364
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+ + ++A + M G +PD +++ LI+ L +GR +AK F M+++ PD
Sbjct: 365 LGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPD 424
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
T +L+ G + +I K G
Sbjct: 425 RVTYITLLDKFGDNGDSQSVMEIWNAMKADG 455
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 205/460 (44%), Gaps = 1/460 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ ++ ++ L K + A FQ+M K D N LIH CR+G++ +A RL
Sbjct: 159 PNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRL 218
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ M A + +TY IL++ C A ++ EV +E+ + + ++ G R
Sbjct: 219 LHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIR 278
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
C +A +L M +E + N LL L + EA + ++ G + + T
Sbjct: 279 CGRLAEATQLFESTMTKESVPDVFTYN-LLIALCKSKQLEEALTLFQEAEQGGVVLDVFT 337
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ Y + + + K G P Y +L+ L K G+ E L +
Sbjct: 338 YSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMN 397
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ ++ + +YN+VID ++A M+ R +P++VT+NTL++G K
Sbjct: 398 RKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTD 457
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ +L + PD TF ++ID L +A R EDAL+ + +V+ G PN+ YN LI
Sbjct: 458 EACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALI 517
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
C G V + LFQ M PD T+ L+ F R A + M+ G
Sbjct: 518 SGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHT 577
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
P +Y+ LI++L +G+ ++A F M G NPD T
Sbjct: 578 PALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQT 617
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 119/493 (24%), Positives = 219/493 (44%), Gaps = 14/493 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ-CKPDRFTYNILIHGICRIGVVDE 63
G+ S I A ++ +D A M C+PD + +H +C + V++
Sbjct: 48 GVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQ 107
Query: 64 ALRLVKQM-EGLGYAPNVYTYTILIDGFCNA---KRVAEVFRVLEIMKERNVCPNEATVR 119
A+ L M E AP+V Y LI G+C A R ++FR L+ +E + PN +
Sbjct: 108 AMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLK--QEGSCKPNAVSFD 165
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKL---VCNTLLYRLSNNSMASEAAAILRKM 176
+LV +F C +A + L F E K VCNTL++ M +A +L M
Sbjct: 166 TLV--IFLC-KMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHM 222
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
++ T+ V ++E ++ G Y +++ + GR
Sbjct: 223 TAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRL 282
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
E + V +V +YN++I CK ++ A + +E + ++ T++ L
Sbjct: 283 AEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYL 341
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ K K E+ + + G PD +N +I CL + + ++AL+ L +M G+
Sbjct: 342 MDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGI 401
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
P+ TYNI+I L + G ++ F M+ + SPD+ T+N L+ ++ + ++A
Sbjct: 402 MPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACD 461
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
F M PD ++ LI L K+GR ++A + + + G P+SY N ++
Sbjct: 462 LFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFC 521
Query: 477 QQGRFEEAHDIVK 489
+ G+ ++ +++ +
Sbjct: 522 RSGQVDKGYELFQ 534
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 115/259 (44%), Gaps = 3/259 (1%)
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
H+ K L + ++ ++ CK+ + E+ E+R + + + VT I +
Sbjct: 8 HLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAG 67
Query: 305 EVHKTRELLVMLLECGF-KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW-GVPPNTIT 362
++ +L + F +PD F + + LC R E A+ +M E P+ +
Sbjct: 68 DLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVA 127
Query: 363 YNILIRSLCAIGDVARSLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
YN LI C GD R+L +F+++ Q P+ +F+ L+ C+M++ A F M
Sbjct: 128 YNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEM 187
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
L GL+ D + LI + G +A++ M + C D++T +++ + G+
Sbjct: 188 LGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQM 247
Query: 482 EEAHDIVKTSKERGISFKS 500
E ++ ++ G + +
Sbjct: 248 HEVASFMELARHDGCALSA 266
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G +P++ +YNA+I +S +D Y FQ M C PD TY IL+ G R G
Sbjct: 504 MGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSM 563
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
A+ L+++M G+ P + TY +LI A +V + + + + M + P+ T +L
Sbjct: 564 AMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621
>gi|357506233|ref|XP_003623405.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498420|gb|AES79623.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 737
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 225/502 (44%), Gaps = 52/502 (10%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P YN L+ C I +A RL M+ G+ PNV +YT LI+G+C+ + + +V
Sbjct: 108 PSLVNYNRLMDHFCFIHRPFDAHRLFFDMKNRGHCPNVVSYTTLINGYCSVGGIRDAMKV 167
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
+ M E + PN T L+ G R D EL+ + ER + +L N +
Sbjct: 168 FDEMLESGLEPNSMTYSVLIRGFLRGRDFESGRELMCKLWERMKMEDELSVNVAAFANLI 227
Query: 163 NSMASE----------------------------------------AAAILRKMGDRGYL 182
+S+ E AA I+ M R ++
Sbjct: 228 DSLCKEGFFNEVFEIAELMPCGSSLPEQVVYGQMIDSFCKVGRYHGAARIVYLMRKRRFV 287
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS----TYLLLMEALYKAGRDVE 238
P ++++ ++ GL + C ++ G + FS TY +L+EAL + DV+
Sbjct: 288 PSDVSYNH----IIHGLSKDGDCMRGYQLLEEGAEFGFSLCEHTYKVLVEALCRV-LDVD 342
Query: 239 GDR-YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
R L + V YN+ + C VN + M + +++T NT+I
Sbjct: 343 KAREVLKLMLYKEGVDKTRIYNIYLRALCHVNNPTELLNVLVFMLESHCQTDVITLNTVI 402
Query: 298 SGHCKDAEVHKTRELLV-MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE-MVEWG 355
+G CK + ++L MLL PD TF ++I L A + ++ALD + M E G
Sbjct: 403 NGFCKMGRFDEALKVLNDMLLGKFCAPDVVTFTTLISGLLDAEKVDEALDLFNRVMPENG 462
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ P +TYN+LIR L + + +F M D I+PD T+ +++ C ++IE+A+
Sbjct: 463 LKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMAGDGITPDSTTYTVIVEGLCECDQIEEAK 522
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ S++ DNF Y+A++K L SG+F+EA + +G +P+ Y+ N+++
Sbjct: 523 SFWQSVIWPSGIHDNFVYAAILKGLCSSGKFNEACHFLYELVDSGISPNIYSYNILINCA 582
Query: 476 VQQGRFEEAHDIVKTSKERGIS 497
G E + IV+ + G++
Sbjct: 583 CNLGLKREVYQIVREMNKNGVA 604
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 184/427 (43%), Gaps = 4/427 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+S + + +ID+L K + + + M P++ Y +I C++G A
Sbjct: 216 LSVNVAAFANLIDSLCKEGFFNEVFEIAELMPCGSSLPEQVVYGQMIDSFCKVGRYHGAA 275
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
R+V M + P+ +Y +I G +++LE E E T + LV +
Sbjct: 276 RIVYLMRKRRFVPSDVSYNHIIHGLSKDGDCMRGYQLLEEGAEFGFSLCEHTYKVLVEAL 335
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
R LD KA E+L + +E + + + N L L + + +E +L M + +
Sbjct: 336 CRVLDVDKAREVLKLMLYKEGVDKTRIYNIYLRALCHVNNPTELLNVLVFMLESHCQTDV 395
Query: 186 STFDYTVTCLVTGLDLNETCGIL-DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T + + +E +L D + + P T+ L+ L A + E N
Sbjct: 396 ITLNTVINGFCKMGRFDEALKVLNDMLLGKFCAPDVVTFTTLISGLLDAEKVDEALDLFN 455
Query: 245 HVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
V + L V +YN++I C K+ + A E+ M I P+ T+ ++ G C+
Sbjct: 456 RVMPENGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMAGDGITPDSTTYTVIVEGLCEC 515
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + + ++ D F + +++ LC + +F +A L E+V+ G+ PN +Y
Sbjct: 516 DQIEEAKSFWQSVIWPSGIHDNFVYAAILKGLCSSGKFNEACHFLYELVDSGISPNIYSY 575
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NILI C +G ++ ++M + ++PD T+ L + ++ K E S T
Sbjct: 576 NILINCACNLGLKREVYQIVREMNKNGVAPDCVTWRILHKLQSKVTKHTPFEDPTLS--T 633
Query: 424 LGLRPDN 430
G+ DN
Sbjct: 634 EGVDMDN 640
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 154/365 (42%), Gaps = 40/365 (10%)
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
PHK +++F + +T+L+ L N++ EA G +P+
Sbjct: 19 PHKPRPFILQFSSLSFQPSQHTISTILHTLCNSNRFEEAHQRFSLFLSSGSIPD------ 72
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY-KAGRDVEGDRYLNHVFKD 249
+ TC +L + R P F T+ L+ + KAG
Sbjct: 73 -----------HRTCNLLLAKLLRSKTP-FQTWSLVKSLIQIKAG--------------- 105
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
V ++ +YN ++D FC ++ A + +M++R PN+V++ TLI+G+C +
Sbjct: 106 -FVPSLVNYNRLMDHFCFIHRPFDAHRLFFDMKNRGHCPNVVSYTTLINGYCSVGGIRDA 164
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI---- 365
++ +LE G +P+ T++ +I R FE + + ++ E + ++ N+
Sbjct: 165 MKVFDEMLESGLEPNSMTYSVLIRGFLRGRDFESGRELMCKLWERMKMEDELSVNVAAFA 224
Query: 366 -LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI SLC G + + M P+ + +I SFC++ + A + + M
Sbjct: 225 NLIDSLCKEGFFNEVFEIAELMPCGSSLPEQVVYGQMIDSFCKVGRYHGAARIVYLMRKR 284
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
P + SY+ +I L K G Q + G + +T +++E L + ++A
Sbjct: 285 RFVPSDVSYNHIIHGLSKDGDCMRGYQLLEEGAEFGFSLCEHTYKVLVEALCRVLDVDKA 344
Query: 485 HDIVK 489
+++K
Sbjct: 345 REVLK 349
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 7/246 (2%)
Query: 256 NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
++ + ++ C N + A + P+ T N L++ + +T L+
Sbjct: 39 HTISTILHTLCNSNRFEEAHQRFSLFLSSGSIPDHRTCNLLLAKLLRSKTPFQTWSLVKS 98
Query: 316 LLE--CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
L++ GF P +N ++D C HR DA +M G PN ++Y LI C++
Sbjct: 99 LIQIKAGFVPSLVNYNRLMDHFCFIHRPFDAHRLFFDMKNRGHCPNVVSYTTLINGYCSV 158
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS- 432
G + ++++F +M + P+ T++ LI+ F R E + + D S
Sbjct: 159 GGIRDAMKVFDEMLESGLEPNSMTYSVLIRGFLRGRDFESGRELMCKLWERMKMEDELSV 218
Query: 433 ----YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
++ LI +L K G F+E + M P+ ++++ + GR+ A IV
Sbjct: 219 NVAAFANLIDSLCKEGFFNEVFEIAELMPCGSSLPEQVVYGQMIDSFCKVGRYHGAARIV 278
Query: 489 KTSKER 494
++R
Sbjct: 279 YLMRKR 284
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P + Y +++ L + + I+ A +Q + D F Y ++ G+C G +EA
Sbjct: 497 GITPDSTTYTVIVEGLCECDQIEEAKSFWQSVIWPSGIHDNFVYAAILKGLCSSGKFNEA 556
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ G +PN+Y+Y ILI+ CN EV++++ M + V P+ T R ++H
Sbjct: 557 CHFLYELVDSGISPNIYSYNILINCACNLGLKREVYQIVREMNKNGVAPDCVTWR-ILHK 615
Query: 125 VFRCLDPHKAFE 136
+ + H FE
Sbjct: 616 LQSKVTKHTPFE 627
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+L +P + S ++ L S RF+EA Q F +G PD T NL+L L++
Sbjct: 31 SLSFQPSQHTISTILHTLCNSNRFEEAHQRFSLFLSSGSIPDHRTCNLLLAKLLRSKTPF 90
Query: 483 EAHDIVKT 490
+ +VK+
Sbjct: 91 QTWSLVKS 98
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 214/445 (48%), Gaps = 13/445 (2%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
C P+ YN +I G C++G ++ A + K+++ G+ P + T+ +I+GFC
Sbjct: 236 CIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASD 295
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRC---LDPHKAFELLIRFMEREPLTQKLVCNTLL 157
R+L +KER + + + +++ +R +DP ++ +I + N L+
Sbjct: 296 RLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWII---ANDCKPDVATYNILI 352
Query: 158 YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK 217
RL A L + +G +P + ++ + + + +L +RG K
Sbjct: 353 NRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCK 412
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFK--DRLVS-NVNSYNMVIDCFCKVNMMDRA 274
P TY +L+ L +G D +N K DR VS + YNM++ CK A
Sbjct: 413 PDIVTYGILIHGLVVSGH---MDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPA 469
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ EM DR+I P+ + TLI G + + + R++ + +E G K D N+MI
Sbjct: 470 KLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKG 529
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
CR+ ++AL C++ M E + P+ TY+ +I D+A ++++F+ M+ ++ P+
Sbjct: 530 FCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPN 589
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK-SGRFDEAKQTF 453
+ T+ +LI FC + AE+ F M L P+ +Y+ LI++L K S ++A +
Sbjct: 590 VVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYW 649
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQ 478
M N C P+ T N +L+ V++
Sbjct: 650 ELMMTNKCVPNEVTFNCLLQGFVKK 674
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 206/492 (41%), Gaps = 41/492 (8%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P N+++ LVKS + A + +M D ++ IL+ G+C G V+ +L
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ G G PN+ Y +I G+C + + V + +K + P T ++++G +
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLL---YRLSNNSMASEAAAILRKMGDRGYLPE 184
D + LL ER N ++ YR GY
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYR-------------------HGY--- 325
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+D E+ G + I KP +TY +L+ L K G+ +L+
Sbjct: 326 -------------KVDPAESIGWI---IANDCKPDVATYNILINRLCKEGKKEVAVGFLD 369
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
K L+ N SY +I +CK D A+++ +M +R P++VT+ LI G
Sbjct: 370 EASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSG 429
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + V L++ G PD +N ++ LC+ RF A SEM++ + P+ Y
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYA 489
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI GD + ++F + D+ NA+I+ FCR +++A M
Sbjct: 490 TLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEE 549
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
L PD F+YS +I +K A + F ME+N C P+ T ++ QG F+ A
Sbjct: 550 HLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMA 609
Query: 485 HDIVKTSKERGI 496
+ K + R +
Sbjct: 610 EETFKEMQLRDL 621
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 114/508 (22%), Positives = 211/508 (41%), Gaps = 19/508 (3%)
Query: 5 GISPSTRLYNAVIDALVKSN-SIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G+ S N +IDA + +D A + + CKPD TYNILI+ +C+ G +
Sbjct: 305 GLRVSVWFLNNIIDAKYRHGYKVDPAE-SIGWIIANDCKPDVATYNILINRLCKEGKKEV 363
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ + + G PN +Y LI +C +K ++L M ER P+ T L+H
Sbjct: 364 AVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIH 423
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ A + ++ ++R + N L+ L A + +M DR LP
Sbjct: 424 GLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILP 483
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ + + + D +E + +++GVK + +++ ++G E +
Sbjct: 484 DAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACM 543
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + ++ LV + +Y+ +ID + K M A +I R M PN+VT+ +LI+G C
Sbjct: 544 NRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQ 603
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR-AHRFEDALDCLSEMVEWGVPPNTIT 362
+ E + P+ T+ ++I L + + E A+ M+ PN +T
Sbjct: 604 GDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVT 663
Query: 363 YNILIRSLCAI--------------GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
+N L++ G + F +M++D S +N+ + C
Sbjct: 664 FNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVH 723
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT-FLSMEQNGCNPDSYT 467
++ A M+ G PD S++A++ G + + F ++ + G
Sbjct: 724 GMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVRY 783
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERG 495
S +LE + Q EA I+ E+
Sbjct: 784 SQ-VLEQHLPQPVICEASTILHAMVEKA 810
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 171/400 (42%), Gaps = 36/400 (9%)
Query: 98 EVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME-REPLTQKLVCNTL 156
E+ VL ++ NV + ++H KA E+ +E + + + CN+L
Sbjct: 117 EIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSL 176
Query: 157 LYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGV 216
L L + +A + +M DRG S +Y+ LV G+ C
Sbjct: 177 LSLLVKSRRLGDARKVYDEMCDRG----DSVDNYSTCILVKGM-----CN---------- 217
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
E + GR + R+ + N+ YN +I +CK+ ++ A
Sbjct: 218 -----------EGKVEVGRKLIEGRW-----GKGCIPNIVFYNTIIGGYCKLGDIENAYL 261
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
+ +E++ + P L TF T+I+G CK+ + + LL + E G + + N++ID
Sbjct: 262 VFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKY 321
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
R D + + ++ P+ TYNILI LC G ++ + + P+
Sbjct: 322 RHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNL 381
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
++ LIQ++C+ + + A K M G +PD +Y LI L+ SG D+A + +
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G +PD+ N+++ L + GRF A + +R I
Sbjct: 442 IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNI 481
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 224/508 (44%), Gaps = 35/508 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P N ++ LV+ D A + +M + D ++ +L+ G+C G V+E
Sbjct: 164 GSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEG 223
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+L++ G G P+V Y +LIDG+C + +L M+ + P T SL++
Sbjct: 224 LKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINC 283
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + D K L + +R + N+++ L A++A IL++M G P+
Sbjct: 284 LGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPD 343
Query: 185 SSTFDYTVTCL-------------------------------VTGL----DLNETCGILD 209
TF+ +T L + G +L +L
Sbjct: 344 IITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLM 403
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+ RG P T+ L+ L AG+ E + + ++ +VN YN++I CK +
Sbjct: 404 EMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKH 463
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
M+ A I EM ++++ P+ + TLI G + + R++ + G +PD + N
Sbjct: 464 MLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCN 523
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+MI C+ +A+ C+S M + G P+ TY +I G++ +LR M
Sbjct: 524 AMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKR 583
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ P++ T+++LI +C+ + AE F +M L P+ +Y+ LI +L K + A
Sbjct: 584 KCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRA 643
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F +M N C+P+ T + ++ L
Sbjct: 644 GLYFETMLLNHCSPNDVTLHYLVNGLTS 671
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 199/478 (41%), Gaps = 50/478 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP+ ++YN+VIDAL K S A + +QM C PD T+N LI G+C G V +A
Sbjct: 304 GLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKA 363
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ PN +YT LI GFC + +L M R P+ T +L+HG
Sbjct: 364 EHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHG 423
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A + + ER+ + N L+ L M A IL +M ++ P+
Sbjct: 424 LVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPD 483
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + +L + I + +GV+P
Sbjct: 484 EFVYATLIDGFIRSENLGDARKIFEFMEHKGVRP-------------------------- 517
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
++ S N +I +C+ MM A MR P+ T+ T+ISG+ K
Sbjct: 518 ---------DIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQG 568
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ L +++ KP+ T++S+I+ C+ + A + M + PN +TY
Sbjct: 569 NLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYT 628
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF-----CRMNKI-------- 411
ILI SL V R+ F+ M + SP+ T + L+ C +N I
Sbjct: 629 ILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVH 688
Query: 412 -EKAEKAFFSMLTLGLR-PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ A F L + P N +Y+A+I +L + EA M + G P+ T
Sbjct: 689 GKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPIT 746
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 178/423 (42%), Gaps = 35/423 (8%)
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
D+A +L +M G + Y+ +L+ G C RV E +++E P+ L
Sbjct: 186 DDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVL 245
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ G R R + + L+ +L +M +G+
Sbjct: 246 IDGYCR----------------RGDMGRGLL-------------------LLGEMEAKGF 270
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
LP T+ + CL DL + + KRG+ P Y +++AL K +
Sbjct: 271 LPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMV 330
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L +F ++ ++N +I C + +A RE R++ PN +++ LI G C
Sbjct: 331 ILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFC 390
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
E+ +LL+ ++ G PD TF ++I L A + +AL +M E V P+
Sbjct: 391 MRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVN 450
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
YN+LI LC + + + ++M + PD + + LI F R + A K F M
Sbjct: 451 IYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFM 510
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G+RPD S +A+IK + G EA +M + GC PD +T ++ +QG
Sbjct: 511 EHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNL 570
Query: 482 EEA 484
A
Sbjct: 571 NGA 573
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 171/400 (42%), Gaps = 36/400 (9%)
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMER-EPLTQKLVCNTLLYRLS 161
L+ M P A + +LV KA ++ R E+ L + CN LL L
Sbjct: 121 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLV 180
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
+A RK+ D +S +Y+ LV GL L+ ++ G+K
Sbjct: 181 EQRRWDDA----RKLYDEMLGEDSGADNYSTCVLVRGL-------CLEGRVEEGLK---- 225
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
L+EA + AG + +V YN++ID +C+ M R + EM
Sbjct: 226 ----LIEARWGAG----------------CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEM 265
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+ P LVT+ +LI+ K ++ K L + + + G P+ +NS+ID LC+
Sbjct: 266 EAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSA 325
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
A+ L +M G P+ IT+N LI LC G V ++ ++ ++P+ ++ L
Sbjct: 326 TQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPL 385
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I FC ++ A M+ G PD ++ ALI L+ +G+ EA M +
Sbjct: 386 IHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQV 445
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
PD N+++ L ++ A +I++ E+ + F
Sbjct: 446 FPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEF 485
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 133/314 (42%), Gaps = 32/314 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P +Y +ID ++S ++ A F+ M +PD + N +I G C+ G++ EA+
Sbjct: 480 VQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAI 539
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M +G P+ +TYT +I G+ + R L M +R PN T SL++G
Sbjct: 540 LCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGY 599
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMGDRGYLPE 184
+ D A E L M+ E L+ +V T+L L A M L
Sbjct: 600 CKTGDTDSA-EGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETM----LLNH 654
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S D T+ LV GL C ++ ++ +V G L
Sbjct: 655 CSPNDVTLHYLVNGLTSCTPC--------------------VINSICCNTSEVHGKDALL 694
Query: 245 HVFKDRLVSNV-----NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
VFK +LV ++ ++YN +I C+ NM+ A + M + PN +TF +L+ G
Sbjct: 695 VVFK-KLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYG 753
Query: 300 HCKDAEVHKTRELL 313
C + R +L
Sbjct: 754 FCSVGKSMNWRTIL 767
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 19/202 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P Y VI K +++ A M +CKP+ TY+ LI+G C+ G D
Sbjct: 548 VGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDS 607
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L M+ +PNV TYTILI +V E M + PN+ T+ LV+
Sbjct: 608 AEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVN 667
Query: 124 GVFRCL------------DPHKAFELLIRFME-----REPLTQKLVCNTLLYRLSNNSMA 166
G+ C + H LL+ F + +P N +++ L ++M
Sbjct: 668 GLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAY--NAIIFSLCRHNML 725
Query: 167 SEAAAILRKMGDRGYLPESSTF 188
EA +M +GY+P TF
Sbjct: 726 REALDFKNRMAKKGYVPNPITF 747
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 210/457 (45%), Gaps = 6/457 (1%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEG---LGYAPNVYTYTILIDGFCNAKRVAEVF 100
D +YN ++ +CR G +D AL L++ M L PN +YT L+ C +R A+
Sbjct: 55 DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
+L M++ V P+ T +L+ G+ D A ELL E +V + LL+
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
+ +M RG P+ + + L + + ++D +RG++P
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY +L+ ++ K G E ++ + + +V +YN +I V MD A + E
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEE 294
Query: 281 MRDRD--IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
M + + P+L+TFN++I G CK + + ++ M+ E G + + FN +I L R
Sbjct: 295 MMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRV 354
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
H+ + A++ + EM G+ P++ TY+ILI C + V R+ +M+ + P+ +
Sbjct: 355 HKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHY 414
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
L+++ C + +A + F+ + + D +YS +I KSG A++ M
Sbjct: 415 IPLLKAMCDQGMMGQA-RDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMID 473
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G PD+ T ++ + + G A ++K G
Sbjct: 474 EGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASG 510
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/506 (24%), Positives = 225/506 (44%), Gaps = 11/506 (2%)
Query: 2 SFLGISPSTR---LYNAVIDALVKSNSIDLAYLKFQQMSVD---QCKPDRFTYNILIHGI 55
+ L PS R YN V+ AL + +D A + MS + +P+ +Y L+ +
Sbjct: 45 ALLSALPSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRAL 104
Query: 56 CRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNE 115
C +A+ L++ M+ G P+V TY LI G C+A V +L M E + PN
Sbjct: 105 CADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNV 164
Query: 116 ATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
L+HG + ++ R ++ L+ L + +AA ++
Sbjct: 165 VVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDM 224
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
M +RG P T++ + + + E + ++GV+P TY L+ L
Sbjct: 225 MTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLE 284
Query: 236 DVEGDRYLNHVFKD--RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
E L + + R+ ++ ++N VI CK+ M +A ++ M + NLV F
Sbjct: 285 MDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAF 344
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
N LI G + +V K EL+ + G +PD FT++ +I+ C+ + E A LSEM
Sbjct: 345 NLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRH 404
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR-ISPDIYTFNALIQSFCRMNKIE 412
G+ P + Y L++++C G + ++ LF +M DR D ++ +I + + +
Sbjct: 405 QGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM--DRNCKLDAAAYSTMIHGAFKSGEKK 462
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
AE+ M+ GL PD +YS I KSG A++ M +G PD + ++
Sbjct: 463 IAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLI 522
Query: 473 ETLVQQGRFEEAHDIVKTSKERGISF 498
+ +G E+ ++ + + ++
Sbjct: 523 QGYGAKGDTEKILELTREMTAKDVAL 548
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 179/403 (44%), Gaps = 3/403 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ +Y+ ++ K+ + F++MS +PD Y LI +CR G V +A
Sbjct: 159 GIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKA 218
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++ M G PNV TY +LI+ C V E + + M E+ V P+ T +L+ G
Sbjct: 219 ARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITG 278
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQK--LVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ L+ +A LL M+ E + + N++++ L +A + M + G
Sbjct: 279 LSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCR 338
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
F+ + L+ + + ++D G++P TY +L+ K + + Y
Sbjct: 339 CNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESY 398
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L+ + + Y ++ C MM +A ++ EM DR+ + ++T+I G K
Sbjct: 399 LSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFK 457
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
E E L +++ G PD T++ I+ ++ A L +M G P+
Sbjct: 458 SGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAV 517
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
++ LI+ A GD + L L ++M A ++ D + ++ S
Sbjct: 518 FDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSL 560
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 140/287 (48%), Gaps = 2/287 (0%)
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
+P +Y LM AL R + L + + +V +Y +I C +D A E
Sbjct: 91 RPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVE 150
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
+ EM + I PN+V ++ L+ G+CK ++ + G +PD + ++ID LC
Sbjct: 151 LLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLC 210
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
R + + A + M E G+ PN +TYN+LI S+C G V +L L + M + PD+
Sbjct: 211 RHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVV 270
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLT--LGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
T+N LI + ++++A M+ +RPD +++++I L K G +A Q
Sbjct: 271 TYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRA 330
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
M +NGC + NL++ L++ + ++A +++ G+ SF
Sbjct: 331 MMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSF 377
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 58/129 (44%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y+ +I KS +A + M + PD TY+I I+ + G + A R++KQM
Sbjct: 448 YSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMT 507
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G+ P+V + LI G+ ++ + M ++V + + ++V + ++
Sbjct: 508 ASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSLGASIEGQ 567
Query: 133 KAFELLIRF 141
K + L F
Sbjct: 568 KLLQSLPGF 576
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 124/514 (24%), Positives = 232/514 (45%), Gaps = 43/514 (8%)
Query: 17 IDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGY 76
+ +LV +D A L+ + S+ C PD N L+ +CR G +A R+V E G
Sbjct: 63 LSSLVHRGELD-AALRVVESSL--CPPDVALANRLVRDLCRRGRPADAARVV---EACGS 116
Query: 77 APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFE 136
A TY+ L DG+C R+ E RV++ M V P+ L+H + A
Sbjct: 117 AATAVTYSALADGYCRVGRLDEARRVVDGMP---VLPSAYAYNPLMHALCVRGQVRDALV 173
Query: 137 LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLV 196
LL + R + N LL +A ++ M G P + T++ + +
Sbjct: 174 LLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMC 233
Query: 197 TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVN 256
D++ +L++ G P Y +++ L AGR + + + +F + +
Sbjct: 234 REGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEA 293
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+ ++VI C+ + RA + +M D N+VT+N ++SG C+ V LL +
Sbjct: 294 TLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNM 353
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
G KP+ FT+N ++ LC A R+EDA D +++M + P+ +T+N +I LC G
Sbjct: 354 QTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLT 413
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD-NFS--- 432
+++ +F++M P+ T++++I+ + K+E++ + M + G P+ N+
Sbjct: 414 MQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEINYHLLA 473
Query: 433 ------------------------------YSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
Y+ ++ L ++G+ D+A +M +GC
Sbjct: 474 ECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCM 533
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
PD T +++++ L +G +EA +++ T R +
Sbjct: 534 PDESTYSILIQGLAHEGYMKEARELLSTLSSRDV 567
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 208/468 (44%), Gaps = 10/468 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G + + Y+A+ D + +D A M V P + YN L+H +C G V +A
Sbjct: 115 GSAATAVTYSALADGYCRVGRLDEARRVVDGMPV---LPSAYAYNPLMHALCVRGQVRDA 171
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+ M G AP+V TY IL++ C + + ++++M+ P T ++ G
Sbjct: 172 LVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDG 231
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R D A ELL + NT+L L + ++ +M P
Sbjct: 232 MCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPS 291
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL- 243
+T ++ L +L+ K TY ++ L + G V+G YL
Sbjct: 292 EATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGH-VDGALYLL 350
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+++ D N+ +YN+++ C + A ++ +M D P+++TFNT+I C+
Sbjct: 351 SNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQK 410
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ E+ + E G P+ T++S+I+ L + + E +L+ L+EM G P I Y
Sbjct: 411 GLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPE-INY 469
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
++L L + ++++ K+Q ISP +N ++ CR K ++A +M++
Sbjct: 470 HLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVS 529
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
G PD +YS LI+ L G EA++ ++ D NLI
Sbjct: 530 DGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSR----DVIVDNLI 573
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 189/429 (44%), Gaps = 36/429 (8%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
+ G +P YN +++A K A M V+ C P TYN+++ G+CR G VD
Sbjct: 180 YRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVD 239
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A L+ + G PN Y ++ G A R +V ++ M N P+EAT
Sbjct: 240 YARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEAT----- 294
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
++I + +E L Q+ A +L KM
Sbjct: 295 ------------LSVVISSLCQEGLFQR------------------AIRLLEKMSKHDCT 324
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
T++ V+ L ++ +L G KP TY +L++ L A R + +
Sbjct: 325 ANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDL 384
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + + + ++ ++N +I C+ + +A E+ ++M ++ PN VT++++I G K
Sbjct: 385 MAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAK 444
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ ++ ELL + GF P+ ++ + +CL + +A+ + ++ + G+ P +
Sbjct: 445 TGKMEQSLELLNEMGSKGFNPE-INYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVL 503
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN ++ LC G +++ + M +D PD T++ LIQ +++A + ++
Sbjct: 504 YNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLS 563
Query: 423 TLGLRPDNF 431
+ + DN
Sbjct: 564 SRDVIVDNL 572
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 10/255 (3%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YNAV+ L + +D A M D CKP+ FTYNIL+ G+C ++A L+ +M
Sbjct: 330 YNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMS 389
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
P++ T+ +I C + V + M E+ CPN T S++ G+ +
Sbjct: 390 QTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKME 449
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
++ ELL M + ++ + L L+ EA ++ K+ D G P++ ++ +
Sbjct: 450 QSLELL-NEMGSKGFNPEINYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTIL 508
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L ++ IL + G P STY +L++ L G Y+ + L+
Sbjct: 509 LGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEG-------YMKEARE--LL 559
Query: 253 SNVNSYNMVIDCFCK 267
S ++S ++++D K
Sbjct: 560 STLSSRDVIVDNLIK 574
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 224/486 (46%), Gaps = 3/486 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ PS R Y+ ++ A K ++ ++M KP+ ++Y I I + + DEA
Sbjct: 269 GVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEA 328
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++ +ME G P+V T+T+LI C+A R+++ V MK+ + P+ T +L+
Sbjct: 329 YRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDK 388
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ E+ M+ + +V T ++ L EA + +M +G +P
Sbjct: 389 FADNGESQSVMEIW-NAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVP 447
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
E +++ ++ + + + G KP T++L + K+G ++ +
Sbjct: 448 EQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRY 507
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +V +V + N V+ K + A + E++ ++P+ +T+ +I K
Sbjct: 508 ELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKA 567
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + ++ ++E PD NS+ID L +A R ++A ++ E + P TY
Sbjct: 568 SKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTY 627
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L+ L G V + L ++M P++ T+N ++ C+ + A +SM T
Sbjct: 628 NTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTT 687
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G PD SY+ +I L+K R++EA F M++ PD T IL + V+ G +E
Sbjct: 688 KGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKE 746
Query: 484 AHDIVK 489
A I+K
Sbjct: 747 ALHIIK 752
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 144/552 (26%), Positives = 235/552 (42%), Gaps = 72/552 (13%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP T Y +I K++ D A F M + C PD N LI + + G DE
Sbjct: 548 MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDE 607
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ Q++ + P TY L+ G +V EV +LE M N PN T +++
Sbjct: 608 AWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILD 667
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + + A ++L + + NT++Y L +EA +I +M + +P
Sbjct: 668 CLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIP 726
Query: 184 ESSTFDYTVTCLVTGLDLNETCGIL-DTFIKRGVKPRFSTYLLLMEALYK---------- 232
+ +T + V + E I+ + F++ G K S+ LME + K
Sbjct: 727 DYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEF 786
Query: 233 ----AGRDVEGDRY-----LNHV---------------FKDRLVS-NVNSYNMVIDCFCK 267
A + D + + H+ FK VS SYN +I
Sbjct: 787 AEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVD 846
Query: 268 VNMMDRATEICREMRDRDIAPN-----------------------------------LVT 292
N++D A + EM++ P+ VT
Sbjct: 847 ENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVT 906
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+NT+ISG K + + +L L+ GF P T+ ++D L +A R EDA + +EM+
Sbjct: 907 YNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEML 966
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
E+G N YNIL+ G+ + LFQ M I+PDI ++ +I + C+ ++
Sbjct: 967 EYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLN 1026
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
F +L +GL PD +Y+ LI L KS R +EA F M++ G P+ YT N ++
Sbjct: 1027 DGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLI 1086
Query: 473 ETLVQQGRFEEA 484
L + G+ EA
Sbjct: 1087 LHLGKAGKAAEA 1098
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/503 (24%), Positives = 225/503 (44%), Gaps = 45/503 (8%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ YN ++D L K+ +++ A M+ C PD +YN +I+G+ + +EA +
Sbjct: 657 PNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSI 716
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH---- 123
QM+ + P+ T ++ F ++ + L I+KE + P T RS H
Sbjct: 717 FCQMKKV-LIPDYATLCTILPSFV---KIGLMKEALHIIKEYFLQPGSKTDRSSCHSLME 772
Query: 124 GVFRCLDPHKAFEL------------------LIRFM-------EREPLTQKLVC----- 153
G+ + K+ E LI+ + E L +K
Sbjct: 773 GILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSL 832
Query: 154 -----NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
N+L+ L + ++ A + +M + G P+ T++ + + + + E +
Sbjct: 833 KTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQ 892
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
+ ++G + + TY ++ L K+ R + D Y N + +Y ++D K
Sbjct: 893 EEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN-LMSQGFSPTPCTYGPLLDGLLK 951
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
++ A + EM + N +N L++GH K L +++ G PD +
Sbjct: 952 AGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKS 1011
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+ +ID LC+A + D L +++E G+ P+ ITYN+LI L + ++ LF +MQ
Sbjct: 1012 YTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQ 1071
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
I P++YT+N+LI + K +A K + +LT G +P+ F+Y+ALI+ SG D
Sbjct: 1072 KKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTD 1131
Query: 448 EAKQTFLSMEQNGCNPDSYTSNL 470
A + M GC P+S T ++
Sbjct: 1132 SAYAAYGRMIVGGCLPNSSTCHI 1154
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 123/500 (24%), Positives = 222/500 (44%), Gaps = 8/500 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P + +I L + I A F +M KPDR TY L+ G
Sbjct: 339 GCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSV 398
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + M+ GY NV YT +ID C RV E + + MK++ + P + + SL+ G
Sbjct: 399 MEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISG 458
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS-EAAAILRKMGDRGYLP 183
+ A EL ++M+ + L S S +A M +G +P
Sbjct: 459 FLKADRFGDALELF-KYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVP 517
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ + + L L + GV P TY ++++ KA + E +
Sbjct: 518 DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIF 577
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ ++ V +V N +ID K D A +I ++++ ++ P T+NTL++G ++
Sbjct: 578 YDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGRE 637
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V + LL + + P+ T+N+++DCLC+ DALD L M G P+ +Y
Sbjct: 638 GKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSY 697
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE---KAFFS 420
N +I L + +F +M+ I PD T ++ SF ++ +++A K +F
Sbjct: 698 NTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHIIKEYF- 755
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
L G + D S +L++ ++K +++ + + +G D + +++ L +Q +
Sbjct: 756 -LQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKK 814
Query: 481 FEEAHDIVKTSKERGISFKS 500
EAH++VK K G+S K+
Sbjct: 815 ALEAHELVKKFKSFGVSLKT 834
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 212/485 (43%), Gaps = 4/485 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + YN ++ LVKS A ++ M VD P TY++L+ + V+
Sbjct: 234 GIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETV 293
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+++ME G PNVY+YTI I A+R E +R+L M+ P+ T L+
Sbjct: 294 LWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQV 353
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A ++ + + + ++ TLL + ++N + I M GY
Sbjct: 354 LCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDN 413
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + L + E + D ++G+ P +Y L+ KA R GD
Sbjct: 414 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADR--FGDALEL 471
Query: 245 HVFKDRLVSNVNSYNMV--IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ D N Y V I+ + K +A + M+ + I P++V N ++ G K
Sbjct: 472 FKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAK 531
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + L G PD T+ MI C +A +F++A+ +M+E P+ +
Sbjct: 532 SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLV 591
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
N LI +L G + ++F +++ + P T+N L+ R K+++ M
Sbjct: 592 VNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY 651
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
P+ +Y+ ++ L K+G ++A SM GC PD + N ++ LV++ R+
Sbjct: 652 HSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYN 711
Query: 483 EAHDI 487
EA I
Sbjct: 712 EAFSI 716
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 180/415 (43%)
Query: 79 NVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELL 138
NV T+ + G + L +MKE + N T LV+ + + +A E+
Sbjct: 203 NVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVY 262
Query: 139 IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTG 198
M + + L+ +LR+M G P ++ + L
Sbjct: 263 KVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQA 322
Query: 199 LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY 258
+E IL G KP T+ +L++ L AGR + + K + +Y
Sbjct: 323 RRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTY 382
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
++D F EI M+ N+V + +I C+ V + E+ + +
Sbjct: 383 ITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQ 442
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
G P+++++NS+I +A RF DAL+ M G PN T+ + I G+ +
Sbjct: 443 KGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIK 502
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+++ ++ M++ I PD+ NA++ + ++ A++ F + +G+ PD +Y+ +IK
Sbjct: 503 AIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIK 562
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
K+ +FDEA + F M +N C PD N +++TL + GR +EA I KE
Sbjct: 563 CCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKE 617
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/494 (22%), Positives = 216/494 (43%), Gaps = 2/494 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P NAV+ L KS + +A F ++ PD TY ++I + DEA
Sbjct: 514 GIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEA 573
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ M P+V LID A R E +++ +KE N+ P + T +L+ G
Sbjct: 574 VKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAG 633
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R + LL + NT+L L N ++A +L M +G +P+
Sbjct: 634 LGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPD 693
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S+++ + LV NE I +K+ + P ++T ++ + K G E +
Sbjct: 694 LSSYNTVIYGLVKEERYNEAFSIF-CQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIK 752
Query: 245 HVF-KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
F + ++ +S + +++ K +++ E + I + LI CK
Sbjct: 753 EYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQ 812
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + EL+ G ++NS+I L + + A +EM E G P+ TY
Sbjct: 813 KKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTY 872
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N+L+ ++ + L++ ++M T+N +I + ++E+A ++++++
Sbjct: 873 NLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMS 932
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G P +Y L+ L+K+GR ++A+ F M + GC + N++L G E+
Sbjct: 933 QGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEK 992
Query: 484 AHDIVKTSKERGIS 497
+ + ++GI+
Sbjct: 993 VCHLFQDMVDQGIN 1006
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 149/331 (45%), Gaps = 4/331 (1%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLV-TGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
A L M + G + + T++ V LV +G D E + + GV P TY +LM
Sbjct: 223 APVALPVMKEAGIVLNAYTYNGLVYFLVKSGFD-REALEVYKVMMVDGVVPSVRTYSVLM 281
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
A K RDVE +L + V NV SY + I + D A I EM +
Sbjct: 282 VAFGKR-RDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGC 340
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P+++T LI C + +++ + + KPD+ T+ +++D + ++
Sbjct: 341 KPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVME 400
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
+ M G N + Y +I +LC +G V +L +F +M+ I P+ Y++N+LI F
Sbjct: 401 IWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFL 460
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ ++ A + F M G +P+ +++ I KSG +A Q + M+ G PD
Sbjct: 461 KADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVV 520
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
N +L L + GR A + K G+S
Sbjct: 521 AGNAVLFGLAKSGRLGMAKRVFHELKAMGVS 551
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 125/271 (46%), Gaps = 1/271 (0%)
Query: 226 LMEALYKAGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
++ AL A E +R+ + + R+V S N ++D + E+ M+ +
Sbjct: 139 VIHALRSADGPAEALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQ 198
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
+ N+ TF + G + + L ++ E G + +T+N ++ L ++ +A
Sbjct: 199 IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREA 258
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
L+ M+ GV P+ TY++L+ + DV L L ++M+A + P++Y++ I+
Sbjct: 259 LEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRV 318
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+ + ++A + M G +PD +++ LI+ L +GR +AK F M+++ PD
Sbjct: 319 LGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPD 378
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
T +L+ G + +I K G
Sbjct: 379 RVTYITLLDKFADNGESQSVMEIWNAMKADG 409
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P YN +ID L KS ++ A F +M P+ +TYN LI + + G E
Sbjct: 1038 MGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAE 1097
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ +++ G+ PNV+TY LI G+ + + M PN +T +H
Sbjct: 1098 AGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCH--IH 1155
Query: 124 GVFRCL--DPHKAFELLIRFMEREPL 147
+ + ++E+++ F+ E +
Sbjct: 1156 ELMKTFLKGDSDSYEIIVTFINAEGM 1181
>gi|359495888|ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g24830-like [Vitis vinifera]
Length = 580
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 209/447 (46%), Gaps = 32/447 (7%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
PD T+N L++G+C+ G +++A LV++M +G +PN T+ I G+C V + +
Sbjct: 164 PDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKALYL 223
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
M + PN+ T L+H + + + L++ + LL ++ +
Sbjct: 224 FSTMANSGIGPNKVTYNILIHALCK--------KGLLKDARK-----------LLEKILD 264
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+ E + I+ +ST + CL G D+ + D ++RG +
Sbjct: 265 DDCGKETSDII-----------TSTI-FMDGCLKKG-DMVQALVHWDEMLQRGTQIDVVA 311
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y +L+ RY +FK L+ ++ +YN +I FCK+ +D A I M
Sbjct: 312 YNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMS 371
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
AP+L+++ +I G C +V + + LV +LE P+ +N +ID R
Sbjct: 372 KMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLS 431
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+AL +MV +G+PPN TYN LI + G++ + + ++M + I PD+ T+N LI
Sbjct: 432 NALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLI 491
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+ C +I A + + ML G PD +Y+ LI+ G EA++ ++++G +
Sbjct: 492 GAACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLS 551
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVK 489
D ++++ + A+D+ K
Sbjct: 552 IDHAPFQILIQKYCRTRVPGRAYDLTK 578
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 177/406 (43%), Gaps = 3/406 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P +N +++ L K+ ++ A ++M P+ T+N I G C VD+A
Sbjct: 161 GVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKA 220
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L M G PN TY ILI C + + ++LE + + + + + +
Sbjct: 221 LYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDCGKETSDIITSTIF 280
Query: 125 VFRCLDPHKAFELLIRF---MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ CL + L+ + ++R + N L++ + A +M RG
Sbjct: 281 MDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGL 340
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
LP+ T++ ++ +L+E C I K G P +Y ++++ L G + ++
Sbjct: 341 LPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQ 400
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+L + ++ +V +N+VID + + A I +M I PN+ T+N LI
Sbjct: 401 FLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQI 460
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + + +L G PD T+N +I C R AL EM+ G P+ I
Sbjct: 461 KGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYEPDII 520
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
TY LIR C G V + L K+Q +S D F LIQ +CR
Sbjct: 521 TYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAPFQILIQKYCR 566
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 197/454 (43%), Gaps = 36/454 (7%)
Query: 51 LIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
+I +C G + AL L +M G P+V T+ L++G C A + + ++ M E
Sbjct: 137 MIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIG 196
Query: 111 VCPNEATVRSLVHGVFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE 168
PN AT + + G CL+ + KA L K+ N L++ L + +
Sbjct: 197 PSPNCATFNTFIKGY--CLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKD 254
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A +L K+ L++ CG + I T + M+
Sbjct: 255 ARKLLEKI------------------------LDDDCGKETSDI--------ITSTIFMD 282
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
K G V+ + + + + +V +YN++I FC + M+ A EM R + P
Sbjct: 283 GCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLP 342
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
++ T+NTLISG CK + + + ++ + G PD ++ +I LC A L
Sbjct: 343 DIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFL 402
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
M+E + P + +N++I GD++ +L + +M + I P+++T+NALI + +
Sbjct: 403 VCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKG 462
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
I A ML G+ PD +Y+ LI A GR A + + M + G PD T
Sbjct: 463 GNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYEPDIITY 522
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGISFKSFP 502
++ +G EA +++ + G+S P
Sbjct: 523 TELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAP 556
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 113/267 (42%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN +I ++ AY F +M PD FTYN LI G C+IG +DEA + M
Sbjct: 312 YNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMS 371
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
+G AP++ +Y ++I G C V + L M E + P ++ G R D
Sbjct: 372 KMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLS 431
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
A + + + N L++ +A +I ++M G P+ T++ +
Sbjct: 432 NALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLI 491
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
++ + D ++RG +P TY L+ G +E + L + + L
Sbjct: 492 GAACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLS 551
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICR 279
+ + ++I +C+ + RA ++ +
Sbjct: 552 IDHAPFQILIQKYCRTRVPGRAYDLTK 578
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 1/137 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+SF GI P+ YNA+I A +K +I A+ ++M ++ PD TYN+LI C G
Sbjct: 441 VSF-GIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGR 499
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ ALRL +M GY P++ TYT LI GFC V E +L ++ + + A +
Sbjct: 500 IHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAPFQI 559
Query: 121 LVHGVFRCLDPHKAFEL 137
L+ R P +A++L
Sbjct: 560 LIQKYCRTRVPGRAYDL 576
>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
Length = 810
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/487 (23%), Positives = 233/487 (47%), Gaps = 12/487 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ + +P++ + ++ L + D A +M C P+ T+ ++IH +C+ G+
Sbjct: 194 VADMPFAPNSYTNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGL 253
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
D A+ ++ QM V Y +I RV E + + M + P+ + +
Sbjct: 254 ADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQMPCK---PDIFSYNT 310
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ R A L+ + ++ ++ NT++ L + + A ++ +M G
Sbjct: 311 VMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYG 370
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P++ T+ V L +++ +L T KP Y +++ L +A R +
Sbjct: 371 CKPDNFTYSALVNALSERGCVDDALELLRTI---PWKPNTVCYRSVLKGLCRADRWDDVG 427
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + +++L + ++ ++IDC C+ ++D E+ REM +P+++ +N+LI+G
Sbjct: 428 KLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGF 487
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
++ V EL + K + T+N M+ LCRA ++EDA ++EMV+ PN
Sbjct: 488 SENGSVDDALELFKNM---SCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNE 544
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+T++ LI LC G V ++ +F+KM P++ ++ LI ++ A K
Sbjct: 545 VTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLND 604
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M +PD YSA +K L ++ R+++A + L M + C PD T ++++ L +G
Sbjct: 605 M---PCKPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGF 661
Query: 481 FEEAHDI 487
E A ++
Sbjct: 662 LESATEV 668
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 229/491 (46%), Gaps = 14/491 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN V+ L + + A M C PD T+N +I +C G+VD A+ +
Sbjct: 303 PDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEV 362
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
V+QM G P+ +TY+ L++ V + +L + + PN RS++ G+ R
Sbjct: 363 VEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTIPWK---PNTVCYRSVLKGLCR 419
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+L+ + + ++ ++ L + A +LR+M G P+
Sbjct: 420 ADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIII 479
Query: 188 FDYTVTCLVTGLDLNETC-GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
++ L+ G N + L+ F K TY +++ L +A + + + + +
Sbjct: 480 YNS----LINGFSENGSVDDALELFKNMSCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEM 535
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
KD + N +++ +I C+ ++ A E+ +M + PN++ ++TLI+G D E
Sbjct: 536 VKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGL-SDQEC 594
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ L +L + KPD +++ + LCRA R+EDA + + EM+ P+ +T++IL
Sbjct: 595 --VDDALKLLNDMPCKPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSIL 652
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I +LC G + + + + M P+++ +++LI F +AE A + +
Sbjct: 653 INNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQY---RAEDALQLLRNMPC 709
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
PD YSA +K L ++ R+++A++ M + C D T ++++ +L Q G + A +
Sbjct: 710 EPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATE 769
Query: 487 IVKTSKERGIS 497
+ + G S
Sbjct: 770 VFEQMSVYGCS 780
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 208/449 (46%), Gaps = 22/449 (4%)
Query: 44 DRFTYNILIHGICRIGV-VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
D T N L+ G CR G + +A R++ + G A +V TY L+ G+C R+ + R+
Sbjct: 135 DAVTRNTLVAGYCRAGGRLADAERMLASLALSGSA-DVVTYNTLVAGYCREGRLNDARRL 193
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
+ M PN T +L+ G+ + A ELL + L +++ L
Sbjct: 194 VADMP---FAPNSYTNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQ 250
Query: 163 NSMASEAAAILRKMGD----RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
N +A A +L +M RG + ++ ++CL +L L F + KP
Sbjct: 251 NGLADRAMGVLDQMSKCRCTRGVI----VYNEIISCLA---ELGRVEEALHLFDQMPCKP 303
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
+Y +M+ L + GR + + + + + ++N VI C ++D A E+
Sbjct: 304 DIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVV 363
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
+M P+ T++ L++ + V ELL + +KP+ + S++ LCRA
Sbjct: 364 EQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTI---PWKPNTVCYRSVLKGLCRA 420
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
R++D ++EM+ + + +T+ ++I LC G V + ++M SPDI +
Sbjct: 421 DRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIY 480
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
N+LI F ++ A + F +M + + +Y+ ++K L ++ ++++A + M +
Sbjct: 481 NSLINGFSENGSVDDALELFKNM---SCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVK 537
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+ C P+ T + ++ L Q+G E A ++
Sbjct: 538 DECLPNEVTFSTLISYLCQKGFVECAIEV 566
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 192/415 (46%), Gaps = 11/415 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+T Y +V+ L +++ D +M +Q D T+ ++I +C+ G+VD +
Sbjct: 405 PNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEV 464
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+++M G +P++ Y LI+GF V + LE+ K + N T ++ G+ R
Sbjct: 465 LREMTKFGCSPDIIIYNSLINGFSENGSVDDA---LELFKNMSCKRNVVTYNYMLKGLCR 521
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
A +L+ ++ E L ++ +TL+ L A + KM +P
Sbjct: 522 AEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVII 581
Query: 188 FDYTVTCLVTGLDLNETCG-ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ + L+ GL E L KP Y ++ L +A R + + +
Sbjct: 582 Y----STLINGLSDQECVDDALKLLNDMPCKPDTICYSAALKGLCRAERWEDAGELILEM 637
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+ + + +++++I+ C ++ ATE+ M + PN+ +++LI+G AE
Sbjct: 638 IRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGF---AEQ 694
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
++ + L +L +PD +++ + LCRA R+EDA + ++EM P + T+++L
Sbjct: 695 YRAEDALQLLRNMPCEPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSML 754
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
I SLC G V + +F++M SP+ ++L+ + ++++ K SM
Sbjct: 755 IGSLCQNGLVDMATEVFEQMSVYGCSPNRKIHSSLVNGYSEQRRVDEGLKLLSSM 809
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 146/287 (50%), Gaps = 11/287 (3%)
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
+P LL++ L AGR + +R L + V + N ++ +C+ R +
Sbjct: 99 RPAAVPCTLLIKKLCAAGRLDDAERVLGASERAGTADAV-TRNTLVAGYCRAG--GRLAD 155
Query: 277 ICREMRDRDIA--PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
R + ++ ++VT+NTL++G+C++ ++ R L+ + F P+ +T ++++
Sbjct: 156 AERMLASLALSGSADVVTYNTLVAGYCREGRLNDARRLVADM---PFAPNSYTNSTLLKG 212
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LC ++DA + LSEM+ G PPN +T+ ++I SLC G R++ + +M R +
Sbjct: 213 LCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRG 272
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+ +N +I + ++E+A F M +PD FSY+ ++K L + GR+++A
Sbjct: 273 VIVYNEIISCLAELGRVEEALHLFDQM---PCKPDIFSYNTVMKGLCRDGRWEDAGTLIA 329
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
M + C PD T N ++ L +G + A ++V+ + G +F
Sbjct: 330 GMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNF 376
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/484 (23%), Positives = 189/484 (39%), Gaps = 47/484 (9%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P +N VI L +D A +QM CKPD FTY+ L++ + G VD+AL L
Sbjct: 338 PDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALEL 397
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKR-------VAEVFR------------------- 101
++ + + PN Y ++ G C A R VAE+ R
Sbjct: 398 LRTIP---WKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQ 454
Query: 102 ---------VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
VL M + P+ SL++G A EL F +
Sbjct: 455 KGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALEL---FKNMSCKRNVVT 511
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
N +L L +A ++ +M LP TF ++ L + + +
Sbjct: 512 YNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMP 571
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
K P Y L+ L + + LN + + Y+ + C+ +
Sbjct: 572 KYNCMPNVIIYSTLINGLSDQECVDDALKLLNDM---PCKPDTICYSAALKGLCRAERWE 628
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A E+ EM ++ P+ VTF+ LI+ C + E+ ++L+ P+ F ++S+I
Sbjct: 629 DAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLI 688
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
+ +R EDAL L M P+TI Y+ ++ LC + L +M +
Sbjct: 689 NGFAEQYRAEDALQLLRNMP---CEPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCP 745
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
D TF+ LI S C+ ++ A + F M G P+ +S+L+ + R DE +
Sbjct: 746 LDEATFSMLIGSLCQNGLVDMATEVFEQMSVYGCSPNRKIHSSLVNGYSEQRRVDEGLKL 805
Query: 453 FLSM 456
SM
Sbjct: 806 LSSM 809
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 179/420 (42%), Gaps = 45/420 (10%)
Query: 78 PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFEL 137
P T+LI C A R+ + RVL ER + T +LV G R E
Sbjct: 100 PAAVPCTLLIKKLCAAGRLDDAERVLGA-SERAGTADAVTRNTLVAGYCRAGGRLADAER 158
Query: 138 LIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVT 197
++ + + NTL+ ++A R + D + P S T + L +
Sbjct: 159 MLASLALSGSADVVTYNTLVAGYCREGRLNDAR---RLVADMPFAPNSYTNSTLLKGLCS 215
Query: 198 GLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNS 257
+ ++ +L I+ G P N +
Sbjct: 216 NKEWDDAEELLSEMIRSGCPP-----------------------------------NDLT 240
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
+ M+I C+ + DRA + +M ++ +N +IS AE+ + E L +
Sbjct: 241 FGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCL---AELGRVEEALHLFD 297
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
+ KPD F++N+++ LCR R+EDA ++ MV PP+ +T+N +I LC G V
Sbjct: 298 QMPCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVD 357
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
++ + ++M PD +T++AL+ + ++ A + + T+ +P+ Y +++
Sbjct: 358 CAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALEL---LRTIPWKPNTVCYRSVL 414
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
K L ++ R+D+ + M +N N D T LI++ L Q+G + ++++ + G S
Sbjct: 415 KGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCS 474
>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
Length = 814
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 137/518 (26%), Positives = 221/518 (42%), Gaps = 56/518 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGI + + + +I V+ + +D A F++M PD Y+ LI G+C +++
Sbjct: 257 LGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEK 316
Query: 64 ALRLVKQMEGLGYAPNVYT---------------------------------YTILIDGF 90
AL L+ +M+ LG P++ Y +++G
Sbjct: 317 ALHLLSEMKELGIDPDIQILSKLIPYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGL 376
Query: 91 CNAKRVAEVFRVLEIMKERN----------------VCPNEATVRSLVHGVFRCLDPHKA 134
N K V + + +L M N V P + ++ G+ A
Sbjct: 377 VNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPXTTSFSIVIDGLCNTGKLDLA 436
Query: 135 FELLIRFMEREPLTQK-LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
L R M R Q L+ N L+ +LSN++ E +L++M G+ P T +
Sbjct: 437 LSLF-RDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFG 495
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
CL D+ ++ G +P Y LL++ L K R E +L + ++ +
Sbjct: 496 CLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLP 555
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
++ +Y+ ID F K+ +D+A EI R++ R P++V +NTLI+G CK V + ++L
Sbjct: 556 DIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDIL 615
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++ G P T+N +ID C+ + A CLS MV PN ITY LI LC
Sbjct: 616 DEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNA 675
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR--PDNF 431
G ++ L+ +M+ SP+ +F ALI C+ + A F M G R PD
Sbjct: 676 GRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREM---GERETPDTI 732
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
Y ALI + I + A + M G PD N
Sbjct: 733 VYVALITSFISNKNPTLAFEILKEMVAKGKFPDPLDKN 770
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/479 (23%), Positives = 207/479 (43%), Gaps = 18/479 (3%)
Query: 22 KSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVY 81
K +D A+ ++M + + T+ +LIHG R VD+AL+L K+M+ G+AP+V
Sbjct: 240 KCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVS 299
Query: 82 TYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF 141
Y LI G C K + + +L MKE + P+ + L+ +D ++ E +
Sbjct: 300 VYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPYCSEEVDIYRLIEERLED 359
Query: 142 MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL----------------PES 185
++ E + L+ N++L L N +A +L M Y P +
Sbjct: 360 LDTEAML--LLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPXT 417
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
++F + L L+ + ++ G K Y L++ L + R E L
Sbjct: 418 TSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKE 477
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++N + C C+ + A ++ REMR P + + L+ CK
Sbjct: 478 MKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKR 537
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ L ++ GF PD +++ ID + + AL+ ++ G P+ + YN
Sbjct: 538 SAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNT 597
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI C + V+ + + +M A + P + T+N LI +C+ I++A M+
Sbjct: 598 LINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKE 657
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
P+ +Y+ LI L +GR D+A + M GC+P+ + ++ L + G + A
Sbjct: 658 REPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAA 716
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 209/494 (42%), Gaps = 35/494 (7%)
Query: 15 AVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGL 74
+ A+ KS SIDL ++ ++M +PD++T ++ C D+AL + ++ G
Sbjct: 164 GALGAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGR 223
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
G+ + + +IL+ F V + F ++E M++ + NE T L+HG R KA
Sbjct: 224 GWV-DGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKA 282
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
+L + + V + L+ L +A +L +M + G P+ +
Sbjct: 283 LQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPY 342
Query: 195 LVTGLDL----NETCGILDTFIKRGVKPRFSTYLLLMEALYKA---GRDVE--------- 238
+D+ E LDT LLL ++ G+ V+
Sbjct: 343 CSEEVDIYRLIEERLEDLDT----------EAMLLLYNSVLNGLVNGKSVDKAYYLLXAM 392
Query: 239 -GDRYLNH-------VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
GD Y ++ + K+ + S+++VID C +D A + R+M N+
Sbjct: 393 TGDNYTDNFEVNKFFMVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNV 452
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
+ +N LI + + LL + GF+P +FT NS+ CLCR ALD + E
Sbjct: 453 LLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVRE 512
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M G P Y +L++ LC A + +M + PDI ++A I F ++
Sbjct: 513 MRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKA 572
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+++A + F + G PD +Y+ LI K R EA M G P T NL
Sbjct: 573 VDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNL 632
Query: 471 ILETLVQQGRFEEA 484
+++ + G ++A
Sbjct: 633 LIDGWCKNGDIDQA 646
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 149/369 (40%), Gaps = 48/369 (13%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G + LYN +ID L SN ++ YL ++M +P +FT+N + +CR V
Sbjct: 446 VGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTG 505
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL +V++M G+ P + YT+L+ C KR AE L M P+ + +
Sbjct: 506 ALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAID 565
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + +A E I R + RGY P
Sbjct: 566 GFVKIKAVDQALE-----------------------------------IFRDICARGYCP 590
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + ++E ILD + +G+ P TY LL++ K G + L
Sbjct: 591 DVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCL 650
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK- 302
+ + NV +Y +ID C D A + EMR + +PN ++F LI G CK
Sbjct: 651 SRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKC 710
Query: 303 ---DAEVHKTRELLVMLLECGFK--PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
DA + RE+ G + PD + ++I A + L EMV G
Sbjct: 711 GWPDAALLYFREM-------GERETPDTIVYVALITSFISNKNPTLAFEILKEMVAKGKF 763
Query: 358 PNTITYNIL 366
P+ + N L
Sbjct: 764 PDPLDKNDL 772
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
L EM + G P+ T ++++ C ++L +F ++ R D + + L+ +F +
Sbjct: 182 LKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYG-RGWVDGHVLSILVLTFSK 240
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+++KA + M LG+R + ++ LI ++ R D+A Q F M+++G PD
Sbjct: 241 CGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSV 300
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ ++ L + E+A ++ KE GI
Sbjct: 301 YDALIGGLCAKKEIEKALHLLSEMKELGI 329
>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 938
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/533 (24%), Positives = 234/533 (43%), Gaps = 46/533 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI +Y ++D L K+ + A F+ + D P+ TY L+ G+C+ G + A
Sbjct: 324 GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSA 383
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ QM PNV TY+ +I+G+ + E +L M+++NV PN T +++ G
Sbjct: 384 EFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDG 443
Query: 125 VFRCLDPHKAFELL--IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+F+ A EL +R + E + + L+ L E +++ M +G
Sbjct: 444 LFKAGKEEMAIELSKEMRLIGVEE--NNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVT 501
Query: 183 PESSTFDYTVTCLVTGLDLNET-----------------------CGILD---------- 209
+ + + G D G+L
Sbjct: 502 LDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAY 561
Query: 210 -TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD-RLVSNVNSYNMVIDCFCK 267
++G++P +T+ ++M + K G D EG L K + ++ S N+V+ C+
Sbjct: 562 KGMREKGIEPDIATFNIMMNSQRKQG-DSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCE 620
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLI---SGHCKDAEVHKTRELLVMLLECGFKPD 324
M+ A I +M +I PNL T+ + S H + + KT E LL G K
Sbjct: 621 NGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHE---TLLSYGIKLS 677
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
+ +N++I LC+ + A + +M G P+T+T+N L+ V ++L +
Sbjct: 678 RQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYS 737
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
M ISP++ T+N +I+ I++ +K M + G+RPD+F+Y+ALI K G
Sbjct: 738 VMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIG 797
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ + M +G P + T N+++ G+ +A +++K +RG+S
Sbjct: 798 NMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVS 850
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 221/495 (44%), Gaps = 17/495 (3%)
Query: 5 GISPSTRLYNAVIDALVKSN--SIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
G+SP N +I + K S ++ L+ + +S+D TYN +I G+C G+ D
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTV-----TYNTVISGLCEHGLAD 178
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA + + +M +G P+ +Y LIDGFC +++ + E N+ + + S
Sbjct: 179 EAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYY 238
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ A E R M +V ++++ RL E +LR+M +
Sbjct: 239 N--------LHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSV 290
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P T+ V L + + RG+ Y +LM+ L+KAG E ++
Sbjct: 291 YPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEK 350
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ +D V NV +Y ++D CK + A I +M ++ + PN+VT++++I+G+
Sbjct: 351 TFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYV 410
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + + LL + + P+ FT+ ++ID L +A + E A++ EM GV N
Sbjct: 411 KKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNY 470
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
+ L+ L IG + L + M + ++ D + +LI F + E A M
Sbjct: 471 ILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEM 530
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G+ D SY+ LI ++K G+ A + M + G PD T N+++ + +QG
Sbjct: 531 QERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDS 589
Query: 482 EEAHDIVKTSKERGI 496
E + K GI
Sbjct: 590 EGILKLWDKMKSCGI 604
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/506 (23%), Positives = 207/506 (40%), Gaps = 73/506 (14%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y A++D L K+ + A QM P+ TY+ +I+G + G+++EA+ L
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 421
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAK--------------------------------- 94
+++ME PN +TY +IDG A
Sbjct: 422 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKR 481
Query: 95 --RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
R+ EV +++ M + V ++ SL+ F+ D A ER +
Sbjct: 482 IGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVS 541
Query: 153 CNTLLY-RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
N L+ L + ++ A + M ++G P+ +TF+ + D + D
Sbjct: 542 YNVLISGMLKFGKVGADWA--YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKM 599
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY------------- 258
G+KP + +++ L + G+ E LN + + N+ +Y
Sbjct: 600 KSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRA 659
Query: 259 ----------------------NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
N +I CK+ M +A + +M R P+ VTFN+L
Sbjct: 660 DAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSL 719
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ G+ + V K +++E G P+ T+N++I L A ++ LSEM G+
Sbjct: 720 MHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGM 779
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
P+ TYN LI IG++ S+ ++ +M AD + P T+N LI F + K+ +A +
Sbjct: 780 RPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARE 839
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIK 442
M G+ P+ +Y +I L K
Sbjct: 840 LLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/461 (19%), Positives = 193/461 (41%), Gaps = 54/461 (11%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLV-KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
PD +N LIH G+V + + L+ +M G +P+V+ +LI FC R++
Sbjct: 91 PDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLS---F 147
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
+ +++ R + + T +++ G L
Sbjct: 148 AISLLRNRVISIDTVTYNTVISG-----------------------------------LC 172
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
+ +A EA L +M G LP++ +++ + + ++D +
Sbjct: 173 EHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI----SELNLI 228
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS----NVNSYNMVIDCFCKVNMMDRATEI 277
T+ +L+ + Y + ++D ++S +V +++ +I+ CK + +
Sbjct: 229 THTILLSSYYNL-------HAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLL 281
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
REM + + PN VT+ TL+ K L ++ G D + ++D L +
Sbjct: 282 LREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFK 341
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
A +A ++E PN +TY L+ LC GD++ + + +M + P++ T
Sbjct: 342 AGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVT 401
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
++++I + + +E+A M + P+ F+Y +I L K+G+ + A + M
Sbjct: 402 YSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMR 461
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
G ++Y + ++ L + GR +E +VK +G++
Sbjct: 462 LIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTL 502
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/495 (20%), Positives = 195/495 (39%), Gaps = 76/495 (15%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ Y+++I+ VK ++ A ++M P+ FTY +I G+ + G + A+
Sbjct: 395 VIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAI 454
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L K+M +G N Y L++ R+ EV +++ M + V ++ SL+
Sbjct: 455 ELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVF 514
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMGDRGYLPE 184
F+ D A ER + N L+ L + ++ A + M ++G P+
Sbjct: 515 FKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWA--YKGMREKGIEPD 572
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+TF+ + D + D G+KP + +++ L + G+ E LN
Sbjct: 573 IATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILN 632
Query: 245 HVFKDRLVSNVNSY-----------------------------------NMVIDCFCKVN 269
+ + N+ +Y N +I CK+
Sbjct: 633 QMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLG 692
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG--------- 320
M +A + +M R P+ VTFN+L+ G+ + V K +++E G
Sbjct: 693 MTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYN 752
Query: 321 --------------------------FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
+PD FT+N++I + + ++ EM+
Sbjct: 753 TIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIAD 812
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM---NKI 411
G+ P T TYN+LI +G + ++ L ++M +SP+ T+ +I C++ +
Sbjct: 813 GLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDV 872
Query: 412 EKAEKAFFSMLTLGL 426
E +KA + GL
Sbjct: 873 EWNKKAMYLAEAKGL 887
>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14770, mitochondrial; Flags: Precursor
Length = 940
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/533 (24%), Positives = 234/533 (43%), Gaps = 46/533 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI +Y ++D L K+ + A F+ + D P+ TY L+ G+C+ G + A
Sbjct: 326 GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSA 385
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ QM PNV TY+ +I+G+ + E +L M+++NV PN T +++ G
Sbjct: 386 EFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDG 445
Query: 125 VFRCLDPHKAFELL--IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+F+ A EL +R + E + + L+ L E +++ M +G
Sbjct: 446 LFKAGKEEMAIELSKEMRLIGVEE--NNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVT 503
Query: 183 PESSTFDYTVTCLVTGLDLNET-----------------------CGILD---------- 209
+ + + G D G+L
Sbjct: 504 LDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAY 563
Query: 210 -TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD-RLVSNVNSYNMVIDCFCK 267
++G++P +T+ ++M + K G D EG L K + ++ S N+V+ C+
Sbjct: 564 KGMREKGIEPDIATFNIMMNSQRKQG-DSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCE 622
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLI---SGHCKDAEVHKTRELLVMLLECGFKPD 324
M+ A I +M +I PNL T+ + S H + + KT E LL G K
Sbjct: 623 NGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHE---TLLSYGIKLS 679
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
+ +N++I LC+ + A + +M G P+T+T+N L+ V ++L +
Sbjct: 680 RQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYS 739
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
M ISP++ T+N +I+ I++ +K M + G+RPD+F+Y+ALI K G
Sbjct: 740 VMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIG 799
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ + M +G P + T N+++ G+ +A +++K +RG+S
Sbjct: 800 NMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVS 852
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 221/495 (44%), Gaps = 17/495 (3%)
Query: 5 GISPSTRLYNAVIDALVKSN--SIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
G+SP N +I + K S ++ L+ + +S+D TYN +I G+C G+ D
Sbjct: 126 GVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTV-----TYNTVISGLCEHGLAD 180
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA + + +M +G P+ +Y LIDGFC +++ + E N+ + + S
Sbjct: 181 EAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYY 240
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ A E R M +V ++++ RL E +LR+M +
Sbjct: 241 N--------LHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSV 292
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P T+ V L + + RG+ Y +LM+ L+KAG E ++
Sbjct: 293 YPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEK 352
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ +D V NV +Y ++D CK + A I +M ++ + PN+VT++++I+G+
Sbjct: 353 TFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYV 412
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + + LL + + P+ FT+ ++ID L +A + E A++ EM GV N
Sbjct: 413 KKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNY 472
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
+ L+ L IG + L + M + ++ D + +LI F + E A M
Sbjct: 473 ILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEM 532
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G+ D SY+ LI ++K G+ A + M + G PD T N+++ + +QG
Sbjct: 533 QERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDS 591
Query: 482 EEAHDIVKTSKERGI 496
E + K GI
Sbjct: 592 EGILKLWDKMKSCGI 606
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/506 (23%), Positives = 207/506 (40%), Gaps = 73/506 (14%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y A++D L K+ + A QM P+ TY+ +I+G + G+++EA+ L
Sbjct: 364 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 423
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAK--------------------------------- 94
+++ME PN +TY +IDG A
Sbjct: 424 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKR 483
Query: 95 --RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
R+ EV +++ M + V ++ SL+ F+ D A ER +
Sbjct: 484 IGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVS 543
Query: 153 CNTLLY-RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
N L+ L + ++ A + M ++G P+ +TF+ + D + D
Sbjct: 544 YNVLISGMLKFGKVGADWA--YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKM 601
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY------------- 258
G+KP + +++ L + G+ E LN + + N+ +Y
Sbjct: 602 KSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRA 661
Query: 259 ----------------------NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
N +I CK+ M +A + +M R P+ VTFN+L
Sbjct: 662 DAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSL 721
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ G+ + V K +++E G P+ T+N++I L A ++ LSEM G+
Sbjct: 722 MHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGM 781
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
P+ TYN LI IG++ S+ ++ +M AD + P T+N LI F + K+ +A +
Sbjct: 782 RPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARE 841
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIK 442
M G+ P+ +Y +I L K
Sbjct: 842 LLKEMGKRGVSPNTSTYCTMISGLCK 867
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/461 (19%), Positives = 193/461 (41%), Gaps = 54/461 (11%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLV-KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
PD +N LIH G+V + + L+ +M G +P+V+ +LI FC R++
Sbjct: 93 PDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLS---F 149
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
+ +++ R + + T +++ G L
Sbjct: 150 AISLLRNRVISIDTVTYNTVISG-----------------------------------LC 174
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
+ +A EA L +M G LP++ +++ + + ++D +
Sbjct: 175 EHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI----SELNLI 230
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS----NVNSYNMVIDCFCKVNMMDRATEI 277
T+ +L+ + Y + ++D ++S +V +++ +I+ CK + +
Sbjct: 231 THTILLSSYYNL-------HAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLL 283
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
REM + + PN VT+ TL+ K L ++ G D + ++D L +
Sbjct: 284 LREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFK 343
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
A +A ++E PN +TY L+ LC GD++ + + +M + P++ T
Sbjct: 344 AGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVT 403
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
++++I + + +E+A M + P+ F+Y +I L K+G+ + A + M
Sbjct: 404 YSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMR 463
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
G ++Y + ++ L + GR +E +VK +G++
Sbjct: 464 LIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTL 504
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/495 (20%), Positives = 195/495 (39%), Gaps = 76/495 (15%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ Y+++I+ VK ++ A ++M P+ FTY +I G+ + G + A+
Sbjct: 397 VIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAI 456
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L K+M +G N Y L++ R+ EV +++ M + V ++ SL+
Sbjct: 457 ELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVF 516
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMGDRGYLPE 184
F+ D A ER + N L+ L + ++ A + M ++G P+
Sbjct: 517 FKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWA--YKGMREKGIEPD 574
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+TF+ + D + D G+KP + +++ L + G+ E LN
Sbjct: 575 IATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILN 634
Query: 245 HVFKDRLVSNVNSY-----------------------------------NMVIDCFCKVN 269
+ + N+ +Y N +I CK+
Sbjct: 635 QMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLG 694
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG--------- 320
M +A + +M R P+ VTFN+L+ G+ + V K +++E G
Sbjct: 695 MTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYN 754
Query: 321 --------------------------FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
+PD FT+N++I + + ++ EM+
Sbjct: 755 TIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIAD 814
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM---NKI 411
G+ P T TYN+LI +G + ++ L ++M +SP+ T+ +I C++ +
Sbjct: 815 GLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDV 874
Query: 412 EKAEKAFFSMLTLGL 426
E +KA + GL
Sbjct: 875 EWNKKAMYLAEAKGL 889
>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Cucumis sativus]
Length = 683
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 220/496 (44%), Gaps = 7/496 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G++ + Y ++DAL K+ + A + M V D +LI G+ + G + E
Sbjct: 39 MGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKE 98
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L + L PN TY+ LID C + L M+E++ PN T SL++
Sbjct: 99 AEYLFCNLYQLNLVPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLIN 158
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + H AF++L + + + + LL A + KM G
Sbjct: 159 GYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKD 218
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
D V + + E ++ G+KP Y LM+ K+G+
Sbjct: 219 NVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLA 278
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +V ++ ++N++I+C K+ D + I MR+ ++P+L T+NT+++G+ K
Sbjct: 279 QEMTSKNVVFDIVTFNVLINCLFKLGKSDTES-IYSAMREMGLSPDLATYNTMLNGNFKK 337
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
EL + P+ T N MI+ LC A R E+A+D L EMV G+ P + TY
Sbjct: 338 GNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTY 397
Query: 364 NIL--IRSLCAIGD-VARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
IL I S D + ++ L MQ ++ D+Y N LI + C++ KA
Sbjct: 398 RILLNISSKSRRADTILQTHELLVNMQL-KVDKDVY--NILISNLCKLGMTRKATAVLKD 454
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G+ D +Y+ALI S A T+ +M +PD T NL+L L + G
Sbjct: 455 MEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGL 514
Query: 481 FEEAHDIVKTSKERGI 496
EA D++ K+RG+
Sbjct: 515 IHEADDLLSEIKKRGL 530
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 127/498 (25%), Positives = 230/498 (46%), Gaps = 9/498 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L + P+ Y+A+ID+ K I+ A +M C P+ TY+ LI+G + G++ +
Sbjct: 109 LNLVPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHD 168
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A +++++M PN+ TY IL+DG A + MK+ + N + + V+
Sbjct: 169 AFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVN 228
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYL 182
+ R +A EL+ + M L LV T L+ + S A + ++M + +
Sbjct: 229 NMKRSGRMEEAEELVAK-MASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVV 287
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+ TF+ + CL L ++T I + G+ P +TY ++ +K G
Sbjct: 288 FDIVTFNVLINCLFK-LGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALEL 346
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL--ISGH 300
N + +L+ N + N++I+ C+ M+ A +I +EM + P T+ L IS
Sbjct: 347 WNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSK 406
Query: 301 CKDAE-VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ A+ + +T ELLV + K DK +N +I LC+ A L +M E G+ +
Sbjct: 407 SRRADTILQTHELLVNM---QLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIAD 463
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
T TYN LI C + R+ + M ++R+SPDI T+N L+ + I +A+
Sbjct: 464 TTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLS 523
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+ GL P+ +Y L+ K E + + M G P N+++ + G
Sbjct: 524 EIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMG 583
Query: 480 RFEEAHDIVKTSKERGIS 497
+ ++A +++ + +G+S
Sbjct: 584 KMKQAKELMNEMQTKGVS 601
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 123/500 (24%), Positives = 223/500 (44%), Gaps = 15/500 (3%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y ++D K+ D+A + +M K + F + ++ + R G ++EA L
Sbjct: 183 PNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEEL 242
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
V +M G P++ YT L+DGF + +V+ + + M +NV + T L++ +F+
Sbjct: 243 VAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFK 302
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
E + M L+ L NT+L + A + +M R +P +
Sbjct: 303 L--GKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAI 360
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T + + L + IL + G+ P +TY +L+ K+ R + +
Sbjct: 361 TCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELL 420
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+L + + YN++I CK+ M +AT + ++M +R I + T+N LI G+C + +
Sbjct: 421 VNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHL 480
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ +L PD T+N ++ L +A +A D LSE+ + G+ PN TY L
Sbjct: 481 KRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETL 540
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ C + + LR++ +M P +N LI F +M K+++A++ M T G+
Sbjct: 541 MCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGV 600
Query: 427 RPDNFSYSALI------------KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
P +Y LI + +K EAK+ F+ M G P T I T
Sbjct: 601 SPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGFVPCESTQACISST 660
Query: 475 LVQQGRFEEAHDIVKTSKER 494
G+ +A ++K++ +R
Sbjct: 661 FAAPGKKADARMLLKSTYKR 680
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 174/370 (47%), Gaps = 36/370 (9%)
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
++LY L + SE +LR+MG G + ++ + L + E L I R
Sbjct: 15 SILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVR 74
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G +L++ L+K+G+ E + ++++ LV N +Y+ +ID CK+ ++ A
Sbjct: 75 GNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCKLGDINGA 134
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL----------------- 317
EM ++D PN++T+++LI+G+ K +H ++L ++
Sbjct: 135 ESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDG 194
Query: 318 ------------------ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ G K + F ++ ++ + R+ R E+A + +++M G+ P+
Sbjct: 195 SFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPD 254
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+ Y L+ G V+ +L L Q+M + + DI TFN LI ++ K + E +
Sbjct: 255 LVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSD-TESIYS 313
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+M +GL PD +Y+ ++ K G + A + + M+ P++ T N+++ L + G
Sbjct: 314 AMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAG 373
Query: 480 RFEEAHDIVK 489
R E A DI+K
Sbjct: 374 RMENAIDILK 383
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/488 (21%), Positives = 196/488 (40%), Gaps = 69/488 (14%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
PD T+ +++G+C+ G + E L+++M +G N +YTIL+D A +VAE
Sbjct: 8 PDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMT 67
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
L M R + L+ G+F+ +A + L CN LY+L+
Sbjct: 68 LACMIVRGNNFDVIACTVLIDGLFKSGQIKEA--------------EYLFCN--LYQLN- 110
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+P T+ + D+N L ++ P T
Sbjct: 111 ------------------LVPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVIT 152
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y L+ K G + + L + + N+ +Y +++D K D A ++ +M+
Sbjct: 153 YSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMK 212
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+ N+ + ++ + + + EL+ + G KPD + +++D ++ +
Sbjct: 213 QGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVS 272
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIG------------------DVA------- 377
AL+ EM V + +T+N+LI L +G D+A
Sbjct: 273 SALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTESIYSAMREMGLSPDLATYNTMLN 332
Query: 378 ---------RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
+L L+ +M++ ++ P+ T N +I C ++E A M+ +GL P
Sbjct: 333 GNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYP 392
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+ +Y L+ KS R D QT + D N+++ L + G +A ++
Sbjct: 393 TSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVL 452
Query: 489 KTSKERGI 496
K +ERGI
Sbjct: 453 KDMEERGI 460
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 125/290 (43%), Gaps = 4/290 (1%)
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
+ G+ P T+ ++ L K G+ EG L + K + N SY +++D K
Sbjct: 1 MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60
Query: 271 MDRA--TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+ A T C +R + +++ LI G K ++ + L L + P+ T+
Sbjct: 61 VAEALMTLACMIVRGNNF--DVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITY 118
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+++ID C+ A L EM E PN ITY+ LI G + + ++ +KM
Sbjct: 119 SALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVH 178
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
P+I T+ L+ + + A + M GL+ + F A + + +SGR +E
Sbjct: 179 KNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEE 238
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
A++ M G PD +++ ++ G+ A ++ + + + F
Sbjct: 239 AEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVF 288
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%)
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M I P++VTF +++ G CK ++ + + LL + + G + ++ ++D L +A +
Sbjct: 1 MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
+AL L+ M+ G + I +LI L G + + LF + + P+ T++A
Sbjct: 61 VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI S C++ I AE A M P+ +YS+LI +K G +A + M
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
P+ T ++L+ + G + A D+ K+ G+ F
Sbjct: 181 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVF 221
>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 822
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 224/484 (46%), Gaps = 8/484 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLA---YLKFQQMSVDQ---CKPDRFTYNILIHGICRIGVV 61
P N++++ LVK+ +D+A Y K + D D ++ I++ G+C +G V
Sbjct: 162 PCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKV 221
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
+E +L+ G G PNV Y ++IDG+C + RV E +K + P T +L
Sbjct: 222 EEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGAL 281
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKL-VCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ G + + + L+ M L + V N+++ + +AA ++R M + G
Sbjct: 282 IDGFCKA-GKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMG 340
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ +T++ + +G + E L+ +R + P +Y LM A K G V
Sbjct: 341 CEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMAS 400
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L + + ++ SY I +D A + +M ++ + P+ +N L+SG
Sbjct: 401 DMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGL 460
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK + LL +L+ +PD + + +++D R + + A + ++ G+ P
Sbjct: 461 CKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGV 520
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ YN++I+ LC G + ++ KM+ +PD YT + +I + + + ++ A K F
Sbjct: 521 VGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQ 580
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ +P+ +Y++LI K A++ F +M+ P+ T +++ + G+
Sbjct: 581 MMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGK 640
Query: 481 FEEA 484
E+A
Sbjct: 641 PEKA 644
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 199/438 (45%), Gaps = 4/438 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN +ID K + A F+++ + P TY LI G C+ G
Sbjct: 235 GCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVV 294
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L+ +M +G NV + +ID V + ++ +M E P+ T L++
Sbjct: 295 DQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILIN- 353
Query: 125 VFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
F C +A E L R ER L K L++ A+ +L K+ + G
Sbjct: 354 -FSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDK 412
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ ++ + V G +++ + + +++GV P Y +LM L K GR
Sbjct: 413 PDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLL 472
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L+ + L + Y ++D F + N +D+ATE+ + + I P +V +N +I G CK
Sbjct: 473 LSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCK 532
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ + + PD++T +++ID + H + AL +M++ PN +
Sbjct: 533 CGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVA 592
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y LI C I D++R+ ++F+ MQ+ + P++ T+ LI F + K EKA F ML
Sbjct: 593 YTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELML 652
Query: 423 TLGLRPDNFSYSALIKAL 440
P++ ++ LI L
Sbjct: 653 MNNCLPNDTTFHYLINGL 670
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 212/463 (45%), Gaps = 12/463 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ +G++ + +++N++IDA K +D A + M+ C+PD TYNILI+ C G
Sbjct: 301 MNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGR 360
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ EA +++ + PN ++YT L+ +C +L + E P+ + +
Sbjct: 361 IKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGA 420
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+HG + A + + ME+ + N L+ L A +L +M D
Sbjct: 421 FIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLN 480
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P++ + V + +L++ + + + +G+ P Y ++++ L K G+ +
Sbjct: 481 LQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAV 540
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
Y+N + + +++ VID + K + +D A ++ +M + PN+V + +LI+G
Sbjct: 541 SYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGF 600
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK A++ + ++ + +P+ T+ +I + + E A M+ PN
Sbjct: 601 CKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPND 660
Query: 361 ITYNILIRSLCAIGDVA----------RSLRL--FQKMQADRISPDIYTFNALIQSFCRM 408
T++ LI L I + RSL L F M ++ S I T+N++I C+
Sbjct: 661 TTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKH 720
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
++ A+ ML G D+ +SAL+ L ++G+ E +
Sbjct: 721 GMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRN 763
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 192/458 (41%), Gaps = 46/458 (10%)
Query: 79 NVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL--VHGVFRCLDPH-KAF 135
N Y+ L+ + +E+ VLE MK RN P + S+ V+ + +D K F
Sbjct: 92 NNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMF 151
Query: 136 ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG--YLPESSTFDYTVT 193
++ P + N+LL L N A + KM +RG + + +Y++
Sbjct: 152 YMVCELYNCFPCV--VANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIV 209
Query: 194 CLVTGL---------------------------------------DLNETCGILDTFIKR 214
+V GL DL + + +
Sbjct: 210 IVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLK 269
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G P TY L++ KAG+ D+ LN + L NV +N +ID K ++D+A
Sbjct: 270 GFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKA 329
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
E+ R M + P++ T+N LI+ C + + E L E P+KF++ ++
Sbjct: 330 AEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHA 389
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
C+ + A D L ++ E G P+ ++Y I A G++ +L + +KM + PD
Sbjct: 390 YCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPD 449
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+N L+ C+ + A+ ML L L+PD + Y+ L+ I++ D+A + F
Sbjct: 450 AQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFE 509
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
+ G +P N++++ L + G+ +A V K
Sbjct: 510 VVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMK 547
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/468 (22%), Positives = 172/468 (36%), Gaps = 82/468 (17%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I+ G P Y A I V ID+A + ++M PD YN+L+ G+C+ G
Sbjct: 406 IAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGR 465
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
A L+ +M L P+ Y Y L+DGF + + + E++ + + P
Sbjct: 466 FPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNV 525
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ +C ++A + + KM
Sbjct: 526 MIKGLCKC-----------------------------------GKMTDAVSYVNKMKIAN 550
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ P+ T + V DL+ + +K+ KP
Sbjct: 551 HAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKP---------------------- 588
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
NV +Y +I+ FCK+ M RA ++ R M+ ++ PN+VT+ LI G
Sbjct: 589 -------------NVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGF 635
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR-------AHRFED-----ALDCL 348
K + K ++L P+ TF+ +I+ L + E+ LD
Sbjct: 636 SKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFF 695
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
+ M+ G TYN +I LC G V + L KM D F+AL+ C+
Sbjct: 696 ATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQT 755
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
K ++ LT F YS + + G+ EA L++
Sbjct: 756 GKSKEWRNIISGDLTKIDFQTAFEYSLKLDKYLYDGKPSEASYILLNL 803
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 200/422 (47%), Gaps = 5/422 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ ++ + KS + DL F M + D +TYNI+I+ +CR AL +
Sbjct: 67 PSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSV 126
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
V +M GY P+V T + LI+GFC RV ++ M+E + +++ G +
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCK 186
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A L R MER+ + V N+L+ L + S+AA ++R M R +P
Sbjct: 187 TGLVNNALVLFGR-MERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVI 245
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
TF + V E + I+R + P TY ++ L G+ E + L+ +
Sbjct: 246 TFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLM 305
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+V +YN +I+ FCK +D T++ REM R + + VTFNT+I G+ +
Sbjct: 306 VTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRP 365
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+E+ + G +P+ T++ ++ LC R E AL M + + + TYNI+
Sbjct: 366 DAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIV 422
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I +C IG+V + LF + + PD+ T+ +I FCR +KA+ + M GL
Sbjct: 423 IHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGL 482
Query: 427 RP 428
P
Sbjct: 483 LP 484
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 205/441 (46%), Gaps = 3/441 (0%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYT 82
S ++D A F M + P ++ L+ I + D + L ME G ++YT
Sbjct: 47 SMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYT 106
Query: 83 YTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFM 142
Y I+I+ C R V+ M + P+ TV SL++G + A +L+ +
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKME 166
Query: 143 EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
E ++ NT++ + + A + +M G ++ T++ VT L +
Sbjct: 167 EMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRS 226
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
+ ++ + R + P T+ L+ A + G+ +E ++ + + + +V +YN +I
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMI 286
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
C +D A +I M + P++VT+NTLI+G CK V + +L+ + + G
Sbjct: 287 HGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLV 346
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
D TFN++I +A R + A + S M G PN TY+IL+ LC V ++L L
Sbjct: 347 VDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVL 403
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
F+ MQ + DI T+N +I C + +E A F S+ GL PD +Y+ +I +
Sbjct: 404 FESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCR 463
Query: 443 SGRFDEAKQTFLSMEQNGCNP 463
+D+A + M+++G P
Sbjct: 464 KRLWDKADFLYRKMQEDGLLP 484
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 125/240 (52%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+YN+VI+C C+ + A + +M P++VT ++LI+G C+ V +L+ +
Sbjct: 106 TYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKM 165
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
E K D +N++ID C+ +AL M GV +T+TYN L+ LC G
Sbjct: 166 EEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRR 225
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+ + RL + M I P++ TF ALI +F R K +A+K + M+ + PD F+Y+++
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSM 285
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
I L G+ DEAKQ M GC PD T N ++ + R +E +V+ +RG+
Sbjct: 286 IHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGL 345
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 136/280 (48%)
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G+ TY +++ L + R V + + K +V + + +I+ FC+ N + A
Sbjct: 99 GIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGA 158
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
++ +M + ++V +NT+I G CK V+ L + G + D T+NS++
Sbjct: 159 VDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTG 218
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
LC + R DA + +MV + PN IT+ LI + G + + +++M I PD
Sbjct: 219 LCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPD 278
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
++T+N++I C ++++A++ M+T G PD +Y+ LI K+ R DE +
Sbjct: 279 VFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVR 338
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
M Q G D+ T N I++ Q GR + A +I R
Sbjct: 339 EMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSR 378
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 165/393 (41%), Gaps = 44/393 (11%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P +++I+ + N + A +M +CK D YN +I G C+ G+V+
Sbjct: 133 FGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNN 192
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L +ME G + TY L+ G C + R ++ R++ M R++ PN T +L++
Sbjct: 193 ALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALIN 252
Query: 124 GVFR---CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
R L+ K +E +IR R N++++ L + EA IL
Sbjct: 253 AFVREGKFLEAKKFYEEMIR---RCIDPDVFTYNSMIHGLCMHGQVDEAKQIL------- 302
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
D + +G P TY L+ K R EG
Sbjct: 303 ----------------------------DLMVTKGCFPDVVTYNTLINGFCKTKRVDEGT 334
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + + LV + ++N +I + + D A EI M R PN+ T++ L+ G
Sbjct: 335 KLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSR---PNIRTYSILLYGL 391
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C + V K L + + + D T+N +I +C EDA D + G+ P+
Sbjct: 392 CYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDV 451
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
+TY +I C ++ L++KMQ D + P
Sbjct: 452 VTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 175/403 (43%), Gaps = 38/403 (9%)
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
++ +A +L ++ PL + + LL ++ + ++ M G + T+
Sbjct: 48 MNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTY 107
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ + CL ++ +K G +P T L+ + R ++ + +
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEE 167
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRA-----------------------TEIC------- 278
R +V YN +ID FCK +++ A T +C
Sbjct: 168 MRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSD 227
Query: 279 --REMRD---RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
R MRD RDI PN++TF LI+ ++ + + ++ ++ PD FT+NSMI
Sbjct: 228 AARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIH 287
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
LC + ++A L MV G P+ +TYN LI C V +L ++M +
Sbjct: 288 GLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVV 347
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
D TFN +IQ + + + + A++ F M G RP+ +YS L+ L + R ++A F
Sbjct: 348 DTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLF 404
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
SM+++ D T N+++ + G E+A D+ + +G+
Sbjct: 405 ESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGL 447
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%)
Query: 2 SFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
S +G P+ R Y+ ++ L + ++ A + F+ M + + D TYNI+IHG+C IG V
Sbjct: 373 SRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNV 432
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCP 113
++A L + G P+V TYT +I GFC + + + M+E + P
Sbjct: 433 EDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/492 (23%), Positives = 226/492 (45%), Gaps = 1/492 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ Y +I A K ++ ++ +++M ++ PD T + +++G CR G + EA
Sbjct: 317 LQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAA 376
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L ++M +G PN +Y +I+ + RV E F + M R + + T +++ G+
Sbjct: 377 VLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGL 436
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
F+ +A E+ ++ + + LL A +L+KM P
Sbjct: 437 FKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNV 496
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
TF + L++ +L ++R V P Y +L++ +KAG D +
Sbjct: 497 ITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKE 556
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ RL + ++++++ +V MD A + +M + I P++V + +LI G+ K+
Sbjct: 557 MKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGN 616
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
++ + E + D +N++I L R +++ C S M+E G+ P+ ITYN
Sbjct: 617 QLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVC-SRMIELGLAPDCITYNT 675
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+I + C G +L + +M++ I P+ T+N LI C+ +EKAE A ML +
Sbjct: 676 IINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVME 735
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
P ++ L+KA +S + D+ Q + +G N ++ + G +A
Sbjct: 736 FVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAK 795
Query: 486 DIVKTSKERGIS 497
++ +RGIS
Sbjct: 796 VVLDEMVKRGIS 807
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 217/476 (45%), Gaps = 1/476 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ Y +I++L KS + A+ QM V D T ++ G+ ++G E
Sbjct: 385 MGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKE 444
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + + + L APN TY+ L+DG+C ++ VL+ M++ +V PN T S+++
Sbjct: 445 AEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIIN 504
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + KA ++L ++R + +V L+ A ++M R
Sbjct: 505 GYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEE 564
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ FD + L ++E ++ +G+ P Y L++ +K G + +
Sbjct: 565 SNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIV 624
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + +V +YN +I ++ D +C M + +AP+ +T+NT+I+ +C
Sbjct: 625 QEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELGLAPDCITYNTIINTYCIK 683
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ ++L + G P+ T+N +I LC+ E A L EM+ P IT+
Sbjct: 684 GKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITH 743
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
L+++ + L++ +K+ A + + +N LI FCR+ KA+ M+
Sbjct: 744 KFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVK 803
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
G+ D +Y+ALI+ ++A +T+ M +G P+ T N +L L G
Sbjct: 804 RGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAG 859
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 214/473 (45%), Gaps = 7/473 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GIS V+D L K A F+ + P+ TY+ L+ G C++G ++ A
Sbjct: 421 GISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELA 480
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++++ME PNV T++ +I+G+ +++ VL M +RNV PN L+ G
Sbjct: 481 ELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDG 540
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ + A + R ++ + LL L EA +++ M +G P+
Sbjct: 541 YFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPD 600
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL- 243
+ + + I+ ++ ++ Y L++ L + G+ RY+
Sbjct: 601 IVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGK--YDPRYVC 658
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + L + +YN +I+ +C + A +I EM+ I PN VT+N LI G CK
Sbjct: 659 SRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKT 718
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V K L +L F P T ++ R+ + + L ++V G+ + Y
Sbjct: 719 GAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVY 778
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI C +G ++ + +M IS D+ T+NALI+ +C + +EKA K + M
Sbjct: 779 NTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFV 838
Query: 424 LGLRPDNFSYSALIKALIKSG----RFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
G+ P+ +Y+ L+ L +G +E ++ M + G P++ T ++++
Sbjct: 839 DGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILV 891
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 212/472 (44%), Gaps = 20/472 (4%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNA---KRVAEVF 100
D N LI G C G++ +A L++ ++ TY L+ FC R +F
Sbjct: 231 DVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLF 290
Query: 101 -RVLEIMKE---------------RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMER 144
+L K+ +N+ P T +L+ + + ++ L + +
Sbjct: 291 NEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMN 350
Query: 145 EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNET 204
+ + C+++LY + +EAA + R+M + G P ++ + L + E
Sbjct: 351 GIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEA 410
Query: 205 CGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
+ + RG+ T +M+ L+K G+ E + + K L N +Y+ ++D
Sbjct: 411 FNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDG 470
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
+CK+ M+ A + ++M + PN++TF+++I+G+ K + K ++L +++ P+
Sbjct: 471 YCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPN 530
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
+ +ID +A + A D EM + + + ++IL+ +L +G + + L
Sbjct: 531 TIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLII 590
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
M + I PDI + +LI + + A M +R D +Y+ALIK L++ G
Sbjct: 591 DMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLG 650
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++D + M + G PD T N I+ T +G+ E+A DI+ K GI
Sbjct: 651 KYD-PRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGI 701
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 207/440 (47%), Gaps = 15/440 (3%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+T +Y +ID K+ D+A ++M + + ++IL++ + R+G +DEA
Sbjct: 527 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEAR 586
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L+ M G P++ Y LIDG+ +++ MKE+N+ + +L+ G+
Sbjct: 587 SLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGL 646
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
R L + + R +E + NT++ +A IL +M G +P +
Sbjct: 647 LR-LGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNA 705
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + L + + LD + P T+ L++A R + D+ L
Sbjct: 706 VTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAY---SRSEKADKILQ- 761
Query: 246 VFKDRLVSN-----VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
++LV++ + YN +I FC++ M +A + EM R I+ +LVT+N LI G+
Sbjct: 762 -IHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGY 820
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA----HRFEDALDCLSEMVEWGV 356
C + V K + + G P+ T+N+++ L A E+ +SEM E G+
Sbjct: 821 CTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGL 880
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
PN TY+IL+ +G+ +++ L +M P + T+N LI + + K+ +A +
Sbjct: 881 VPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARE 940
Query: 417 AFFSMLTLGLRPDNFSYSAL 436
+LT G P++F+Y L
Sbjct: 941 LLNDLLTKGRIPNSFTYDIL 960
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/498 (24%), Positives = 219/498 (43%), Gaps = 63/498 (12%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ +N ++ S + L + M PD F+ N+L+H +C++G +D
Sbjct: 88 LGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDL 147
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL ++ + + NV TY +I GFC V + F +L M +R +C + T LV
Sbjct: 148 ALGYLRNNDVVD-IDNV-TYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVK 205
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G R L+++ E ++Y L + + + L + D GY
Sbjct: 206 GYCRI--------GLVQYAEW-----------VMYNLVDGGVTKDVIG-LNTLID-GYCE 244
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
GL +++ +++ + VK TY L++A K G +
Sbjct: 245 -------------AGL-MSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLF 290
Query: 244 NHVF-----KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
N + +DRL +N ++ + +++ P LVT+ TLI+
Sbjct: 291 NEILGFWKDEDRLKNN---------------------DVVTQNEIKNLQPTLVTYTTLIA 329
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
+CK V ++ L ++ G PD T +S++ CR + +A EM E G+ P
Sbjct: 330 AYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDP 389
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
N ++Y +I SL G V + L +M IS DI T ++ ++ K ++AE+ F
Sbjct: 390 NHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVF 449
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
++L L L P+ +YSAL+ K G+ + A+ ME+ P+ T + I+ ++
Sbjct: 450 ETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKK 509
Query: 479 GRFEEAHDIVKTSKERGI 496
G +A D+++ +R +
Sbjct: 510 GMLSKAVDVLREMVQRNV 527
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/489 (22%), Positives = 209/489 (42%), Gaps = 22/489 (4%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN VI + +D + +M D T NIL+ G CRIG+V A ++ +
Sbjct: 165 YNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLV 224
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G +V LIDG+C A +++ ++E +V + T +L+ + D
Sbjct: 225 DGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLT 284
Query: 133 KA---FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
+A F ++ F + E RL NN + ++ + P T+
Sbjct: 285 RAESLFNEILGFWKDED------------RLKNNDVVTQNEI-------KNLQPTLVTYT 325
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
+ + + E+ + I G+ P T ++ + G+ E +++
Sbjct: 326 TLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEM 385
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
L N SY +I+ K + A + +M R I+ ++VT T++ G K + +
Sbjct: 386 GLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEA 445
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
E+ +L+ P+ T+++++D C+ + E A L +M + VPPN IT++ +I
Sbjct: 446 EEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIING 505
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
G +++++ + ++M + P+ + LI + + + + A+ M + L
Sbjct: 506 YAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEES 565
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
N + L+ L + GR DEA+ + M G +PD +++ ++G A IV+
Sbjct: 566 NVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQ 625
Query: 490 TSKERGISF 498
KE+ I F
Sbjct: 626 EMKEKNIRF 634
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 166/371 (44%), Gaps = 15/371 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P Y ++ID K + A Q+M + D YN LI G+ R+G D
Sbjct: 596 GIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPR 655
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +E LG AP+ TY +I+ +C + + +L MK + PN T L+ G
Sbjct: 656 YVCSRMIE-LGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGG 714
Query: 125 VFRCLDPHKAF----ELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + KA E+L+ P+T K L+ S + A + I K+ G
Sbjct: 715 LCKTGAVEKAESALDEMLVMEFVPTPITHKF----LVKAYSRSEKADKILQIHEKLVASG 770
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ ++ +T + +LD +KRG+ TY L+ Y G VE
Sbjct: 771 LELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRG-YCTGSHVEKA 829
Query: 241 -RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT----EICREMRDRDIAPNLVTFNT 295
+ + +F D + N+ +YN ++ +M+ ++ EM +R + PN T++
Sbjct: 830 LKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDI 889
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
L+SG+ + KT L + ++ GF P T+N +I ++ + +A + L++++ G
Sbjct: 890 LVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKG 949
Query: 356 VPPNTITYNIL 366
PN+ TY+IL
Sbjct: 950 RIPNSFTYDIL 960
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 151/386 (39%), Gaps = 51/386 (13%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YNA+I L++ D Y+ + + + PD TYN +I+ C G ++AL ++ +M+
Sbjct: 639 YNALIKGLLRLGKYDPRYVCSRMIELG-LAPDCITYNTIINTYCIKGKTEDALDILNEMK 697
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G PN TY ILI G C V + L+ M P T + LV R
Sbjct: 698 SYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKAD 757
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
K ++ + + V NTL+ M +A +L +M RG + T++ +
Sbjct: 758 KILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALI 817
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE------------GD 240
TG + + G+ P +TY L+ L AG E +
Sbjct: 818 RGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNE 877
Query: 241 RYL--NHVFKDRLVSN-------------------------VNSYNMVIDCFCKVNMMDR 273
R L N D LVS + +YN++I + K M
Sbjct: 878 RGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIE 937
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCK-------DAEVHKTRELLV--MLLECGFKPD 324
A E+ ++ + PN T++ L G D + ++ E+ V +L+E G K
Sbjct: 938 ARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLLIEMGRKGL 997
Query: 325 KFTFNSMIDCL-CRAHRFEDALD-CL 348
KF+ + I L H DAL+ CL
Sbjct: 998 KFSKKAEIRRLKIFPHWMVDALNKCL 1023
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 109/253 (43%), Gaps = 13/253 (5%)
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKV-------NMMDRATEICREMRDRDIAPNLVTFNTL 296
+ + KD + ++ + FC + + A+ MR + P L +NTL
Sbjct: 41 SQIHKDSIFIPPTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTL 100
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL--SEMVEW 354
+ V + + + +L CG PD F+ N ++ LC+ + AL L +++V+
Sbjct: 101 LYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVD- 159
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
+ +TYN +I C G V + L +M + D T N L++ +CR+ ++ A
Sbjct: 160 ---IDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYA 216
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
E ++++ G+ D + LI ++G +A + + ++ D T N +L+
Sbjct: 217 EWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKA 276
Query: 475 LVQQGRFEEAHDI 487
+ G A +
Sbjct: 277 FCKTGDLTRAESL 289
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 75/170 (44%), Gaps = 2/170 (1%)
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
F ++I RF A S M G+ P +N L+ A G V++ ++ M
Sbjct: 62 FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ PD+++ N L+ S C++ ++ A + + + DN +Y+ +I + G D
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDI--DNVTYNTVIWGFCQKGLVD 179
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ M + G DS T N++++ + G + A ++ + G++
Sbjct: 180 QGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVT 229
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 6/120 (5%)
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
F M+A + P + +N L+ F + + + + ML G+ PD FS + L+ +L K
Sbjct: 82 FSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCK 141
Query: 443 SGRFDEAKQTFLSMEQNG--CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
G D A L +N + D+ T N ++ Q+G ++ ++ +RG+ F S
Sbjct: 142 VGDLDLA----LGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDS 197
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLK----FQQMSVDQCKPDRFTYNILIHGICRIGV 60
GI+P+ YN ++ L + ++ + +M+ P+ TY+IL+ G R+G
Sbjct: 840 GIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGN 899
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ + L +M G+ P + TY +LI + + ++ E +L + + PN T
Sbjct: 900 RKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDI 959
Query: 121 LVHG 124
L G
Sbjct: 960 LTCG 963
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 44/100 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y+ ++ + + + +M P TYN+LI + G + EA
Sbjct: 879 GLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEA 938
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE 104
L+ + G PN +TY IL G+ N E+ R L+
Sbjct: 939 RELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLK 978
>gi|224135537|ref|XP_002322098.1| predicted protein [Populus trichocarpa]
gi|222869094|gb|EEF06225.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 138/519 (26%), Positives = 232/519 (44%), Gaps = 56/519 (10%)
Query: 31 LKFQQMSVDQCKPDRFTYNILIHGIC-RIGVVDEALRLVKQMEGLGYAPNVYTYTILIDG 89
L QQ S+ C +R + IH +C + VDEALRL+ + GY P+ + +I G
Sbjct: 37 LNHQQQSI--CITNRSYWTQKIHDLCTKHRNVDEALRLLDHLRLRGYLPDSLNLSSIIHG 94
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREP--L 147
C+A R E + L I P+E T LV + DP + ++ R +E +P +
Sbjct: 95 LCDANRFNEAHQRLIIFLTSLCVPDERTCNVLVARLLHSKDPFRTLNVIHRLIEFKPEFV 154
Query: 148 TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL----DLNE 203
+ N L+ + + S+ + A +L M +RG+ P ++ T LV G ++++
Sbjct: 155 PSLINYNRLIDQFCSVSLPNVAHRMLYDMINRGHCPSIVSY----TTLVNGYSKIGEISD 210
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV----SNVNS-- 257
+ D + GV P +Y LL+ + + RD+E R L HV R+ +VNS
Sbjct: 211 AYKLFDEMPEWGVVPNSLSYSLLIRGVLRK-RDIERGRELMHVLFQRMRHEEDQSVNSAA 269
Query: 258 -----------------------------------YNMVIDCFCKVNMMDRATEICREMR 282
Y +ID CKV A+ + MR
Sbjct: 270 FDNLVDCLCREGLFNEVFMIAEEMPQGNRVNEDFAYGHLIDSLCKVGRSHGASRVVYIMR 329
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+ P++V++N++I G CK+ + +LL + G+ ++T+ +++ LC+A +
Sbjct: 330 KKGFTPSVVSYNSIIHGLCKEGGCMRAYQLLEEGVGFGYLLSEYTYKVLVEALCQAMDLD 389
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
A + L M+ G T YNI +R+LC + + L + M PD+ T N +I
Sbjct: 390 KAREVLKVMLNKGGMDRTRIYNIYLRALCLMNNPTELLNVLVSMLQTNCQPDVITLNTVI 449
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLR-PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
FC+M ++E+A K M+T PD +++++I L+ GR EA+ L M + G
Sbjct: 450 NGFCKMGRVEEALKVLNDMMTGKFSAPDAVTFTSIISGLLNVGRSQEARNLLLQMLEKGI 509
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
P T N IL L + +EA + G++ S
Sbjct: 510 TPGVVTYNAILRGLFKLQLTKEAMAVFDEMITDGVAANS 548
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/496 (21%), Positives = 222/496 (44%), Gaps = 41/496 (8%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P YN LI C + + + A R++ M G+ P++ +YT L++G+ +++ +++
Sbjct: 155 PSLINYNRLIDQFCSVSLPNVAHRMLYDMINRGHCPSIVSYTTLVNGYSKIGEISDAYKL 214
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR--- 159
+ M E V PN + L+ GV R D + EL+ +R + N+ +
Sbjct: 215 FDEMPEWGVVPNSLSYSLLIRGVLRKRDIERGRELMHVLFQRMRHEEDQSVNSAAFDNLV 274
Query: 160 --LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK 217
L + +E I +M + E + + + L + ++ K+G
Sbjct: 275 DCLCREGLFNEVFMIAEEMPQGNRVNEDFAYGHLIDSLCKVGRSHGASRVVYIMRKKGFT 334
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
P +Y ++ L K G + + L + + +Y ++++ C+ +D+A E+
Sbjct: 335 PSVVSYNSIIHGLCKEGGCMRAYQLLEEGVGFGYLLSEYTYKVLVEALCQAMDLDKAREV 394
Query: 278 CREMRDR-----------------------------------DIAPNLVTFNTLISGHCK 302
+ M ++ + P+++T NT+I+G CK
Sbjct: 395 LKVMLNKGGMDRTRIYNIYLRALCLMNNPTELLNVLVSMLQTNCQPDVITLNTVINGFCK 454
Query: 303 DAEVHKTRELLVMLLECGFK-PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
V + ++L ++ F PD TF S+I L R ++A + L +M+E G+ P +
Sbjct: 455 MGRVEEALKVLNDMMTGKFSAPDAVTFTSIISGLLNVGRSQEARNLLLQMLEKGITPGVV 514
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN ++R L + ++ +F +M D ++ + T++ +++ C +I+ A+K + +
Sbjct: 515 TYNAILRGLFKLQLTKEAMAVFDEMITDGVAANSQTYSIIVEGLCESGQIDGAKKFWDEV 574
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ D+F Y+A++K L +SG +EA + +G NP+ + N++++ G
Sbjct: 575 IWPSKIHDDFVYAAILKGLCRSGHLNEAIHFLYELVDSGVNPNIVSYNIVIDRACSLGMK 634
Query: 482 EEAHDIVKTSKERGIS 497
EA+ I ++ G++
Sbjct: 635 REAYQIAGEMQKNGLT 650
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 207/470 (44%), Gaps = 8/470 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS Y +++ K I AY F +M P+ +Y++LI G+ R ++
Sbjct: 187 GHCPSIVSYTTLVNGYSKIGEISDAYKLFDEMPEWGVVPNSLSYSLLIRGVLRKRDIERG 246
Query: 65 LRLV-----KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
L+ + + N + L+D C EVF + E M + N +
Sbjct: 247 RELMHVLFQRMRHEEDQSVNSAAFDNLVDCLCREGLFNEVFMIAEEMPQGNRVNEDFAYG 306
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGD 178
L+ + + H A + + M ++ T +V N++++ L A +L +
Sbjct: 307 HLIDSLCKVGRSHGASRV-VYIMRKKGFTPSVVSYNSIIHGLCKEGGCMRAYQLLEEGVG 365
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
GYL T+ V L +DL++ +L + +G R Y + + AL E
Sbjct: 366 FGYLLSEYTYKVLVEALCQAMDLDKAREVLKVMLNKGGMDRTRIYNIYLRALCLMNNPTE 425
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI-APNLVTFNTLI 297
L + + +V + N VI+ FCK+ ++ A ++ +M AP+ VTF ++I
Sbjct: 426 LLNVLVSMLQTNCQPDVITLNTVINGFCKMGRVEEALKVLNDMMTGKFSAPDAVTFTSII 485
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
SG + R LL+ +LE G P T+N+++ L + ++A+ EM+ GV
Sbjct: 486 SGLLNVGRSQEARNLLLQMLEKGITPGVVTYNAILRGLFKLQLTKEAMAVFDEMITDGVA 545
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
N+ TY+I++ LC G + + + + ++ D + + A+++ CR + +A
Sbjct: 546 ANSQTYSIIVEGLCESGQIDGAKKFWDEVIWPSKIHDDFVYAAILKGLCRSGHLNEAIHF 605
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ ++ G+ P+ SY+ +I G EA Q M++NG PD+ T
Sbjct: 606 LYELVDSGVNPNIVSYNIVIDRACSLGMKREAYQIAGEMQKNGLTPDAVT 655
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/438 (19%), Positives = 191/438 (43%), Gaps = 41/438 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSID----LAYLKFQQMSVDQCKP-DRFTYNILIHGICRIG 59
G+ P++ Y+ +I +++ I+ L ++ FQ+M ++ + + ++ L+ +CR G
Sbjct: 222 GVVPNSLSYSLLIRGVLRKRDIERGRELMHVLFQRMRHEEDQSVNSAAFDNLVDCLCREG 281
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+ +E + ++M + Y LID C R RV+ IM+++ P+ +
Sbjct: 282 LFNEVFMIAEEMPQGNRVNEDFAYGHLIDSLCKVGRSHGASRVVYIMRKKGFTPSVVSYN 341
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
S++HG+ + +A++LL + L + L+ L +A +L+ M ++
Sbjct: 342 SIIHGLCKEGGCMRAYQLLEEGVGFGYLLSEYTYKVLVEALCQAMDLDKAREVLKVMLNK 401
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G + + ++ + L + E +L + ++ +P T ++ K GR E
Sbjct: 402 GGMDRTRIYNIYLRALCLMNNPTELLNVLVSMLQTNCQPDVITLNTVINGFCKMGRVEEA 461
Query: 240 DRYLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT--- 295
+ LN + + + + ++ +I V A + +M ++ I P +VT+N
Sbjct: 462 LKVLNDMMTGKFSAPDAVTFTSIISGLLNVGRSQEARNLLLQMLEKGITPGVVTYNAILR 521
Query: 296 --------------------------------LISGHCKDAEVHKTRELLVMLLECGFKP 323
++ G C+ ++ ++ ++
Sbjct: 522 GLFKLQLTKEAMAVFDEMITDGVAANSQTYSIIVEGLCESGQIDGAKKFWDEVIWPSKIH 581
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D F + +++ LCR+ +A+ L E+V+ GV PN ++YNI+I C++G + ++
Sbjct: 582 DDFVYAAILKGLCRSGHLNEAIHFLYELVDSGVNPNIVSYNIVIDRACSLGMKREAYQIA 641
Query: 384 QKMQADRISPDIYTFNAL 401
+MQ + ++PD T+ L
Sbjct: 642 GEMQKNGLTPDAVTWRTL 659
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 119/292 (40%), Gaps = 36/292 (12%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
TR+YN + AL N+ M C+PD T N +I+G C++G V+EAL+++
Sbjct: 407 TRIYNIYLRALCLMNNPTELLNVLVSMLQTNCQPDVITLNTVINGFCKMGRVEEALKVLN 466
Query: 70 Q-MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRC 128
M G AP+ T+T +I G N R E +L M E+ + P T +++ G+F+
Sbjct: 467 DMMTGKFSAPDAVTFTSIISGLLNVGRSQEARNLLLQMLEKGITPGVVTYNAILRGLFKL 526
Query: 129 LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+ EA A+ +M G S T+
Sbjct: 527 -----------------------------------QLTKEAMAVFDEMITDGVAANSQTY 551
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
V L ++ D I Y +++ L ++G E +L +
Sbjct: 552 SIIVEGLCESGQIDGAKKFWDEVIWPSKIHDDFVYAAILKGLCRSGHLNEAIHFLYELVD 611
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ N+ SYN+VID C + M A +I EM+ + P+ VT+ TL H
Sbjct: 612 SGVNPNIVSYNIVIDRACSLGMKREAYQIAGEMQKNGLTPDAVTWRTLDKLH 663
>gi|297844892|ref|XP_002890327.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336169|gb|EFH66586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 903
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 141/549 (25%), Positives = 236/549 (42%), Gaps = 81/549 (14%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ +T + N++I+ KS + A +M+ KPD TYN L+ G CR G VDE
Sbjct: 360 MGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWSLKPDHHTYNTLVDGYCRAGHVDE 419
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL+L +M P V TY IL+ G+ +V + ++M +R V NE + +L+
Sbjct: 420 ALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCSTLLE 479
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+F+ D +A +L + R LT + N ++ L +EA IL + P
Sbjct: 480 ALFKLGDFDEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKP 539
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ +L E + D K+G+ P Y L+ +K ++L
Sbjct: 540 DVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKY-------KHL 592
Query: 244 NHV------FKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN------- 289
N V + R L V +Y +I +C + M+D+A C EM ++ I N
Sbjct: 593 NKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKI 652
Query: 290 -------------------LVTFNTLISGH--------------------CKDAEVHKTR 310
+V F+ L+ G+ + E +
Sbjct: 653 ANSLFRLDKFDEACLLLQKIVDFDLLLPGYQSLKEFLEPSATTCLKTQKIAESVENSTPK 712
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG-VPPNTITYNILIRS 369
+LLV P+ +N I LC+A + DA S+++ P+ TY ILI
Sbjct: 713 KLLV--------PNNIVYNVAIAGLCKAGKLTDAQKLFSDLLSSDRFIPDEYTYTILIHG 764
Query: 370 LCAI-GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
CAI GD+ ++ L +M I P+I T+NALI+ C++ +++A++ + G P
Sbjct: 765 -CAIDGDINKAFNLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLRKLPQKGTTP 823
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+ +Y+ LI LIKSG EA + M + G SY +QG ++ +++
Sbjct: 824 NAITYNTLIDGLIKSGDVAEAMRLKEKMIEKGLVRGSY----------KQGDVDKPKEVL 873
Query: 489 KTSKERGIS 497
+ GI+
Sbjct: 874 DPGVKLGIT 882
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 134/533 (25%), Positives = 222/533 (41%), Gaps = 39/533 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P ++ +ID ++ I A M + + N LI+G C+ G + EA ++
Sbjct: 329 PDQHMHGVLIDGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M P+ +TY L+DG+C A V E ++ M ++ V P T L+ G R
Sbjct: 389 LTRMNDWSLKPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYSR 448
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
H L ++R ++ C+TLL L EA + + RG L ++ T
Sbjct: 449 IGAFHDVLSLWKMMLKRGVTANEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTIT 508
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ ++ L +NE ILD KP TY L Y G E + +
Sbjct: 509 LNVMISGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFME 568
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K + + YN +I K +++ ++ E+R R + P + T+ LI+G C +
Sbjct: 569 KKGIFPTIEMYNTLISGAFKYKHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMID 628
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED------------------------ 343
K ++E G + + + + L R +F++
Sbjct: 629 KAYATCFEMIEKGITLNVNICSKIANSLFRLDKFDEACLLLQKIVDFDLLLPGYQSLKEF 688
Query: 344 ----ALDCL-----SEMVEWGVP-----PNTITYNILIRSLCAIGDVARSLRLFQK-MQA 388
A CL +E VE P PN I YN+ I LC G + + +LF + +
Sbjct: 689 LEPSATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLTDAQKLFSDLLSS 748
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
DR PD YT+ LI I KA M G+ P+ +Y+ALIK L K G D
Sbjct: 749 DRFIPDEYTYTILIHGCAIDGDINKAFNLRDEMALKGIIPNIVTYNALIKGLCKLGNVDR 808
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
A++ + Q G P++ T N +++ L++ G EA + + E+G+ S+
Sbjct: 809 AQRLLRKLPQKGTTPNAITYNTLIDGLIKSGDVAEAMRLKEKMIEKGLVRGSY 861
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/467 (22%), Positives = 201/467 (43%), Gaps = 36/467 (7%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME-GLGYAPNVYTYTILIDGFC 91
+ QM + PD FT +I+++ CR G VD+A+ K+M+ LG NV T LI+G+
Sbjct: 213 YDQMISFEVSPDVFTCSIVVNAYCRCGKVDKAMAFAKEMDNSLGLELNVVTCNSLINGYA 272
Query: 92 NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL 151
V + RVL +M ER V N T SL+ K
Sbjct: 273 MIGDVEGMTRVLRLMSERGVSRNVVTFTSLI---------------------------KS 305
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
C + EA + + ++ +P+ + + + + D
Sbjct: 306 YCK--------KGLMEEAEQVFELVTEKKLVPDQHMHGVLIDGYCRNGRICDAVRVHDYM 357
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
I+ GV+ + L+ K+G+ VE ++ L + L + ++YN ++D +C+ +
Sbjct: 358 IEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWSLKPDHHTYNTLVDGYCRAGHV 417
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
D A ++C M +++ P ++T+N L+ G+ + H L M+L+ G ++ + +++
Sbjct: 418 DEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCSTL 477
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
++ L + F++A+ ++ G+ +TIT N++I LC + V + + + R
Sbjct: 478 LEALFKLGDFDEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC 537
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
PD+ T+ AL + + +++A M G+ P Y+ LI K ++
Sbjct: 538 KPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNKVAD 597
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
+ + G P T ++ G ++A+ E+GI+
Sbjct: 598 LVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITL 644
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/227 (18%), Positives = 88/227 (38%), Gaps = 54/227 (23%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE--------WG--------VPPNTITYN 364
F+PD + M+ L RA + L E+V WG + ++
Sbjct: 100 FRPDYKAYCKMVHILSRARNYGQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSPTVFD 159
Query: 365 ILIRSLCAIGDVARSLRLF-----------------------------------QKMQAD 389
++++ G V +L +F +M +
Sbjct: 160 MILKVYAEKGMVKNALHVFDNMGKYGRIPSLLSCNSLLSNLVKKGENFVALHVYDQMISF 219
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSML--TLGLRPDNFSYSALIKALIKSGRFD 447
+SPD++T + ++ ++CR K++KA AF + +LGL + + ++LI G +
Sbjct: 220 EVSPDVFTCSIVVNAYCRCGKVDKA-MAFAKEMDNSLGLELNVVTCNSLINGYAMIGDVE 278
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
+ M + G + + T ++++ ++G EEA + + E+
Sbjct: 279 GMTRVLRLMSERGVSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTEK 325
>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 543
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 227/492 (46%), Gaps = 8/492 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P + +N + + K A + MS KP+ T+NI+I+ +CR+ +
Sbjct: 24 PCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSV 83
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ M +G P++ T+T +++G C VA+ R ++ +K+ + T ++++G+ +
Sbjct: 84 LGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCK 143
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
A L + E+ + ++ L + M EA + +M +G P T
Sbjct: 144 VGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFT 203
Query: 188 FDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ CL+ GL E +L +++G+ P T+ ++ K G
Sbjct: 204 YN----CLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIF 259
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + NV +YN +I C +N M A E+ M + PN+VT+N+LI G C+
Sbjct: 260 SFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCET 319
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++K L ++ G PD T++++I C+A + A + M + G P+ T
Sbjct: 320 KNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTC 379
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
I++ L + ++ LF++++ DI ++ ++ C K+ A + F + +
Sbjct: 380 AIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSS 439
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G++ D +Y+ +I L K G D+A+ + ME+NGC PD T N+ ++ L+++ +
Sbjct: 440 KGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISK 499
Query: 484 AHDIVKTSKERG 495
+ + K +G
Sbjct: 500 STKYLMFMKGKG 511
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 222/473 (46%), Gaps = 2/473 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S++G+ P+ +N VI+ L + N + M +P T+ +++G+C G
Sbjct: 52 MSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGN 111
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V +A+R V ++ +GY + YT +I+G C + L+ M+E+N + +
Sbjct: 112 VAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSA 171
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+V G+ + +A +L + + N L++ L N EAA +L M +G
Sbjct: 172 VVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKG 231
Query: 181 YLPESSTFDYTVT-CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
+P+ TF+ L TG+ ++ I G++ TY ++ A + +
Sbjct: 232 IMPDVQTFNVIAGRFLKTGM-ISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDA 290
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + + + N+ +YN +I +C+ M++A EM + + P++VT++TLI G
Sbjct: 291 MEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGG 350
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK + +EL ++ + G PD T ++D L + H +A+ E+ + +
Sbjct: 351 FCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLD 410
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
I Y+I++ +C+ G + +L LF + + + D+ T+N +I C+ ++ AE
Sbjct: 411 IIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLM 470
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
M G PD +Y+ ++ L++ ++ + + M+ G ++ T+ L++
Sbjct: 471 KMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLI 523
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 188/408 (46%), Gaps = 7/408 (1%)
Query: 15 AVIDALVK--SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
A+I+ L K +S L+YLK +M C D Y+ ++ G+C+ G+V EAL L QM
Sbjct: 136 AIINGLCKVGHSSAALSYLK--KMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMT 193
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G G PN++TY LI G CN R E +L M + + P+ T +++ G F
Sbjct: 194 GKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTF-NVIAGRFLKTGMI 252
Query: 133 KAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
+ + FM + +V N+++ + +A + M +G LP T++
Sbjct: 253 SRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSL 312
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ ++N+ L + G+ P T+ L+ KAG+ V + K
Sbjct: 313 IHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQ 372
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
+ ++ + +++D K + A + RE+ + +++ ++ +++G C +++ E
Sbjct: 373 LPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALE 432
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
L L G K D T+N MI+ LC+ +DA D L +M E G PP+ TYN+ ++ L
Sbjct: 433 LFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLL 492
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
++++S + M+ + T LI F NK +A + F
Sbjct: 493 RRYEISKSTKYLMFMKGKGFRANATTTKLLINYF-SANKENRAFQVFL 539
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 161/403 (39%), Gaps = 76/403 (18%)
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC---GILDTFIKRGVKPRFSTY 223
+ A ++++ M G P ST + + CL LN T +L K GV+P T+
Sbjct: 43 TTAISLIKHMSYIGVKPNVSTHNIVINCLCR---LNHTVFGFSVLGLMFKIGVEPSIVTF 99
Query: 224 LLLMEALYKAGRDVEGDRYLNHVF-----KDRLVS------------------------- 253
++ L G + R+++H+ DR
Sbjct: 100 TTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEE 159
Query: 254 -----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+V +Y+ V+D CK M+ A ++ +M + I PNL T+N LI G C +
Sbjct: 160 QNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKE 219
Query: 309 TRELLVMLLECGFKPDKFTFN-----------------------------------SMID 333
LL ++ G PD TFN S+I
Sbjct: 220 AAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIG 279
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
C ++ +DA++ M+ G PN +TYN LI C ++ +++ +M + + P
Sbjct: 280 AHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDP 339
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
D+ T++ LI FC+ K A++ FF M G PD + + ++ L K EA F
Sbjct: 340 DVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLF 399
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+E+ + D ++IL + G+ +A ++ +G+
Sbjct: 400 RELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGV 442
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 98/229 (42%)
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
V +D A + +M P + FN L K L+ + G KP+ T
Sbjct: 4 VKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVST 63
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
N +I+CLCR + L M + GV P+ +T+ ++ LC G+VA+++R ++
Sbjct: 64 HNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLK 123
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
D YT A+I C++ A M D +YSA++ L K G
Sbjct: 124 DMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVF 183
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
EA F M G P+ +T N ++ L R++EA ++ +GI
Sbjct: 184 EALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGI 232
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 125/282 (44%), Gaps = 11/282 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ +GI + YN++I A N + A F M C P+ TYN LIHG C
Sbjct: 262 MGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKN 321
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++A+ + +M G P+V T++ LI GFC A + + +M + P+ T
Sbjct: 322 MNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAI 381
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS-----EAAAILRK 175
++ G+F+C H E + F E E + L + ++Y + N M S +A +
Sbjct: 382 ILDGLFKC---HFHSEAMSLFRELEKMNSDL--DIIIYSIILNGMCSSGKLNDALELFSY 436
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
+ +G + T++ + L L++ +L + G P TY + ++ L +
Sbjct: 437 LSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYE 496
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
+ +YL + +N + ++I+ F N +RA ++
Sbjct: 497 ISKSTKYLMFMKGKGFRANATTTKLLINYF-SANKENRAFQV 537
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ YN +I+ L K +D A +M + C PD TYN+ + G+ R + ++
Sbjct: 441 GVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKS 500
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAK--RVAEVF 100
+ + M+G G+ N T +LI+ F K R +VF
Sbjct: 501 TKYLMFMKGKGFRANATTTKLLINYFSANKENRAFQVF 538
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 216/488 (44%), Gaps = 6/488 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P YNA++D KS A Q+M + P TYN LI + G+++EA
Sbjct: 294 GFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEA 353
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV-- 122
L L QM G P+V+TYT L+ GF A + +V M+ PN T +L+
Sbjct: 354 LDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKM 413
Query: 123 HG-VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
HG + + K F+ I+ P + NTLL N M S+ + I ++M G+
Sbjct: 414 HGNRGKFAEMMKVFDD-IKLCNCSP--DIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGF 470
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+ E TF+ ++ ++ + + ++ GV P STY ++ AL + G + ++
Sbjct: 471 VAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEK 530
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + R N SY+ ++ + ++R E+ + + V TL+ +
Sbjct: 531 VLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNS 590
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + +T + L G PD T N+M+ R A + L+ M E P+
Sbjct: 591 KSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLT 650
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN L+ + +S + +++ + PD ++N +I ++CR ++++A + F M
Sbjct: 651 TYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEM 710
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
L PD +Y+ I F EA M + GC PD T N I++ + +
Sbjct: 711 KDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLDQR 770
Query: 482 EEAHDIVK 489
EA+ VK
Sbjct: 771 HEANSFVK 778
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 130/597 (21%), Positives = 223/597 (37%), Gaps = 141/597 (23%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV-VDE 63
G+ Y +I+A S A F +M D C P TYN++++ ++G+
Sbjct: 188 GVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSN 247
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
LV+ M G AP++YTY LI E + + MK P++ T +L+
Sbjct: 248 VTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLD 307
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ P EA +L++M G+ P
Sbjct: 308 VFGKSRRPQ-----------------------------------EAMKVLQEMEANGFSP 332
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD------- 236
S T++ ++ G L E + + +G+KP TY L+ KAG+D
Sbjct: 333 TSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVF 392
Query: 237 --------------------VEGDR----YLNHVFKDRLVSN----VNSYNMVIDCFCKV 268
+ G+R + VF D + N + ++N ++ F +
Sbjct: 393 LEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQN 452
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
M + + I +EM+ TFNTLIS + + + + +LE G PD T+
Sbjct: 453 GMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTY 512
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR---------- 378
N+++ L R +E + L+EM + PN ++Y+ L+ + ++ R
Sbjct: 513 NAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYS 572
Query: 379 -------------------------SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
+ R F +++ ISPDI T NA++ + R + K
Sbjct: 573 GSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAK 632
Query: 414 A-----------------------------------EKAFFSMLTLGLRPDNFSYSALIK 438
A E+ +L G++PD SY+ +I
Sbjct: 633 AHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIY 692
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
A ++GR EA + F M+ + PD T N + T F EA D+V+ ++G
Sbjct: 693 AYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQG 749
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/521 (23%), Positives = 230/521 (44%), Gaps = 55/521 (10%)
Query: 15 AVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYN---ILIHGICRIGVVDEALRLVKQM 71
+I AL SN DLA F + + + F+ + ++I + + G V A L+ +
Sbjct: 125 GIIKALGFSNKCDLALAVFHWVRTNNSNTNLFSSSAIPVIIKILGKAGRVSSAASLLLAL 184
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRV----------------------------------- 96
+ G +VY YT LI+ + ++ R
Sbjct: 185 QNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMP 244
Query: 97 -AEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT-QKLVCN 154
+ V ++E M+ R V P+ T +L+ R +A L + M+ E T K+ N
Sbjct: 245 WSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQ-MKLEGFTPDKVTYN 303
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
LL + EA +L++M G+ P S T++ ++ G L E + + +
Sbjct: 304 ALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHK 363
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS---NVNSYNMVIDCFCKVNMM 271
G+KP TY L+ KAG+D D + + R V N+ ++N +I
Sbjct: 364 GIKPDVFTYTTLLSGFEKAGKD---DFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKF 420
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
++ +++ + +P++VT+NTL++ ++ + + + GF ++ TFN++
Sbjct: 421 AEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTL 480
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
I R F+ A+ M+E GV P+ TYN ++ +L G +S ++ +M+ R
Sbjct: 481 ISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRC 540
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI----KSGRFD 447
P+ ++++L+ ++ +IE+ AF + G +++ L+K L+ KS
Sbjct: 541 KPNELSYSSLLHAYANGKEIERM-NAFAEEIYSGSVE---THAVLLKTLVLVNSKSDLLI 596
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
E ++ FL + + G +PD T N +L ++ +AH+I+
Sbjct: 597 ETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEIL 637
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 141/312 (45%), Gaps = 5/312 (1%)
Query: 190 YTVTCLVTGLDLN----ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
Y TCL+ + + + + + G P TY +++ K G L
Sbjct: 194 YAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVE 253
Query: 246 VFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ R V+ ++ +YN +I C + ++ + A + ++M+ P+ VT+N L+ K
Sbjct: 254 AMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSR 313
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ ++L + GF P T+NS+I + E+ALD ++MV G+ P+ TY
Sbjct: 314 RPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYT 373
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ G ++++F +M+A P+I TFNALI+ K + K F +
Sbjct: 374 TLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLC 433
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
PD +++ L+ ++G + F M++ G + T N ++ + G F++A
Sbjct: 434 NCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQA 493
Query: 485 HDIVKTSKERGI 496
+ K+ E G+
Sbjct: 494 MAVYKSMLEAGV 505
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 3/179 (1%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG-DVAR 378
G D + + +I+ + R+ DA++ ++M + G P ITYN+++ +G +
Sbjct: 188 GVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSN 247
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKI-EKAEKAFFSMLTLGLRPDNFSYSALI 437
L + M++ ++PD+YT+N LI S CR + E+A F M G PD +Y+AL+
Sbjct: 248 VTALVEAMRSRGVAPDLYTYNTLI-SCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALL 306
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
KS R EA + ME NG +P S T N ++ + G EEA D+ +GI
Sbjct: 307 DVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGI 365
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
GV + Y LI + + G ++ LF KMQ D +P + T+N ++ + +M
Sbjct: 188 GVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSN 247
Query: 415 EKAFF-SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A +M + G+ PD ++Y+ LI + ++EA F M+ G PD T N +L+
Sbjct: 248 VTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLD 307
Query: 474 TLVQQGRFEEAHDIVKTSKERGIS 497
+ R +EA +++ + G S
Sbjct: 308 VFGKSRRPQEAMKVLQEMEANGFS 331
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 213/474 (44%), Gaps = 10/474 (2%)
Query: 16 VIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV----KQM 71
V+++ S D A F ++ CKP YN L+ + +G ++ + M
Sbjct: 114 VLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDAL--LGESGNKFHMIGAVYENM 171
Query: 72 EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDP 131
G G PNV+TY +L+ C ++ ++L M +R P+ + ++V +
Sbjct: 172 RGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRV 231
Query: 132 HKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
+A E+ RF ++ VCN L+ L E ++ +M G P ++
Sbjct: 232 EEAREVARRFGAEGVVS---VCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSV 288
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
++ L ++ +L I+RG +P T+ LM+ + GR EG + + +
Sbjct: 289 ISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGV 348
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREM-RDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
NV YN +++ C + A ++C M +D PN+ T++TL+ G K ++
Sbjct: 349 RPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGAS 408
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
E+ ++ CG +P+ + SM+D LC+ F+ A + M G PP +T+N I+ L
Sbjct: 409 EVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGL 468
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C G V ++R+ +MQ PD T+N L+ +N++++A + + + +
Sbjct: 469 CCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNL 528
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+Y+ ++ G+ + Q M NG PD+ T N+++ + G+ A
Sbjct: 529 VTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTA 582
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 223/501 (44%), Gaps = 9/501 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALV--KSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRI 58
I G P+ ++YN ++DAL+ N + ++ M + +P+ FTYN+L+ +C+
Sbjct: 134 IKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKN 193
Query: 59 GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
G +D A +L+ +M G P+ +YT ++ C RV E V V +
Sbjct: 194 GKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGVV---SVC 250
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
+L+ G+ R + F L+ + + ++++ LS+ A A+L KM
Sbjct: 251 NALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIR 310
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
RG P TF + G + E G+ + GV+P Y L+ L +G E
Sbjct: 311 RGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAE 370
Query: 239 GDRYLNHVFKDRLV-SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ KD NV +Y+ ++ F K + A+E+ +M + + PN+V + +++
Sbjct: 371 AVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMV 430
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
CK++ + L+ + G P TFN+ I LC R A+ + +M +G
Sbjct: 431 DVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCL 490
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P+T TYN L+ L ++ ++ + L ++++ ++ ++ T+N ++ F K E +
Sbjct: 491 PDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQV 550
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN--PDSYTSNLILETL 475
ML G++PD + + +I A K G+ A Q FL G PD +L +
Sbjct: 551 LGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQ-FLDRITAGKELCPDIIAHTSLLWGI 609
Query: 476 VQQGRFEEAHDIVKTSKERGI 496
EEA + +GI
Sbjct: 610 CNSLGIEEAIVYLNKMLNKGI 630
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 174/403 (43%), Gaps = 37/403 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y++VI L ++LA +M C+P+ T++ L+ G G V E
Sbjct: 277 GVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEG 336
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVH 123
+ L + M G PNV Y L++G C + +AE V M++ C PN T +LVH
Sbjct: 337 VGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVH 396
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + D A E+ + + +V +++ L NSM +A ++ M G P
Sbjct: 397 GFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPP 456
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
TF+ TFIK L GR + R +
Sbjct: 457 TVVTFN--------------------TFIK---------------GLCCGGRVLWAMRVV 481
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + + + +YN ++D VN + A E+ RE+ +R + NLVT+NT++ G
Sbjct: 482 DQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSH 541
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG-VPPNTIT 362
+ ++L +L G KPD T N +I + + A+ L + + P+ I
Sbjct: 542 GKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIA 601
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+ L+ +C + ++ KM I P+I T++ L++ F
Sbjct: 602 HTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGF 644
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
FK T++ MI+ L R + L +M +P + ++ ++ S G R+L
Sbjct: 69 FKHTPLTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRAL 128
Query: 381 RLFQKMQADRISPDIYTFNALIQSFC--RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
++F +++ P + +N L+ + NK + +M G+ P+ F+Y+ L+K
Sbjct: 129 KMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLK 188
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
AL K+G+ D A + + M + GC PD + ++ + + GR EEA ++ + G+
Sbjct: 189 ALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGV 246
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 1/212 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ +N I L + A QM C PD TYN L+ G+ + + EA
Sbjct: 453 GCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEA 512
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++++E N+ TY ++ GF + + V +VL M V P+ TV +++
Sbjct: 513 CELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYA 572
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ A + L R + L ++ +T LL+ + N+ EA L KM ++G P
Sbjct: 573 YSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFP 632
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRG 215
+T+D V L ILD + +G
Sbjct: 633 NIATWDVLVRGFFKKLGHMGPIRILDDILGKG 664
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 206/431 (47%), Gaps = 42/431 (9%)
Query: 19 ALVKSN-SIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYA 77
AL+K N S D+ Y+ +++M + +P+ FT+N++I+ +C+ G +++A +++ M+ G +
Sbjct: 197 ALLKENRSADVEYV-YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCS 255
Query: 78 PNVYTYTILIDGFCNAKRVAEVFR---VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
PNV +Y LIDG+C ++++ VL+ M E +V PN T L+ G ++
Sbjct: 256 PNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKD------ 309
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
+ P + K + ++M D+ P +++ +
Sbjct: 310 --------DNLPGSMK---------------------VFKEMLDQDVKPNVISYNSLING 340
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
L G ++E + D + GV+P TY L+ K E V V
Sbjct: 341 LCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPT 400
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
YNM+ID +CK+ +D + EM I P++ T+N LI+G C++ + ++L
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
L G PD TF+ +++ CR A L EM + G+ P +TYNI+++ C G
Sbjct: 461 QLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519
Query: 375 DVARSLRLFQKMQAD-RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
++ + + +M+ + R+ ++ ++N L+Q + + K+E A ML GL P+ +Y
Sbjct: 520 NLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Query: 434 SALIKALIKSG 444
+ + ++ G
Sbjct: 580 EIVKEEMVDQG 590
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 196/416 (47%), Gaps = 10/416 (2%)
Query: 86 LIDGFC---NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFM 142
+DGF + +V +F + + NVC N LV FE R
Sbjct: 123 FLDGFVRNGSDHQVHSIFHAISMCD--NVCVNSIIADMLVLAYANNSRFELGFEAFKRSG 180
Query: 143 EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
L C L+ L + +++ + ++M R P TF+ + L +N
Sbjct: 181 YYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMN 240
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD---VEGDRYLNHVFKDRLVSNVNSYN 259
+ +++ G P +Y L++ K G + + D L + ++ + N+ ++N
Sbjct: 241 KARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFN 300
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
++ID F K + + + ++ +EM D+D+ PN++++N+LI+G C ++ + + ++
Sbjct: 301 ILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSA 360
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G +P+ T+N++I+ C+ ++ALD + G P T YN+LI + C +G +
Sbjct: 361 GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDG 420
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
L ++M+ + I PD+ T+N LI CR IE A+K F + + GL PD ++ L++
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEG 479
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI-VKTSKER 494
+ G +A M + G P T N++++ ++G + A ++ + KER
Sbjct: 480 YCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKER 535
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 144/274 (52%), Gaps = 3/274 (1%)
Query: 226 LMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
LM AL K R + + + + ++ NV ++N+VI+ CK M++A ++ +M+
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 286 IAPNLVTFNTLISGHCK---DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+PN+V++NTLI G+CK + +++K +L ++E P+ TFN +ID +
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
++ EM++ V PN I+YN LI LC G ++ ++ + KM + + P++ T+NALI
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
FC+ + +++A F S+ G P Y+ LI A K G+ D+ ME+ G
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
PD T N ++ L + G E A + +G+
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 137/309 (44%), Gaps = 9/309 (2%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+SP+ +N +ID K +++ + F++M KP+ +YN LI+G+C G + EA+
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI 351
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ +M G PN+ TY LI+GFC + E + +K + P L+
Sbjct: 352 SMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAY 411
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKL-VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ F L MERE + + N L+ L N A + ++ +G LP+
Sbjct: 412 CKLGKIDDGFALK-EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPD 469
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + + + +L K G+KPR TY ++M+ K G
Sbjct: 470 LVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRT 529
Query: 245 HVFKD-RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI-----S 298
+ K+ RL NV SYN+++ + + ++ A + EM ++ + PN +T+ +
Sbjct: 530 QMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQ 589
Query: 299 GHCKDAEVH 307
G D E H
Sbjct: 590 GFVPDIEGH 598
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 10/241 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YNA+I+ K++ + A F + P YN+LI C++G +D+
Sbjct: 361 GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDG 420
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++ME G P+V TY LI G C + ++ + + + + P+ T L+ G
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEG 479
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R + KA +L++ M + L + + ++ + +AA +R ++
Sbjct: 480 YCRKGESRKA-AMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLR 538
Query: 185 SSTFDYTVTCLVTGLD----LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG--RDVE 238
+ Y V L+ G L + +L+ +++G+ P TY ++ E + G D+E
Sbjct: 539 MNVASYNV--LLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIE 596
Query: 239 G 239
G
Sbjct: 597 G 597
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 203/459 (44%), Gaps = 36/459 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SPS+ +N +D L KS ++D + F + + + + D +++ I I C G V +
Sbjct: 68 GHSPSSFSFNNALDLLAKSGNLDRTWGFFTEY-LGRTQFDVYSFGITIKAFCENGNVSKG 126
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ QME +G +PNV+ YTILI+ C + + + M + + N+ +++G
Sbjct: 127 FELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMING 186
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ FEL +KM G LP
Sbjct: 187 FFKKGYKKDGFELY-----------------------------------QKMKLVGVLPN 211
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ +T L+ + D KRGV TY +L+ L + G+ + + L
Sbjct: 212 LYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLE 271
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + ++NM++D C +D+A +++ + P LVT+N LISG K
Sbjct: 272 RMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVG 331
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
EL+ + + G P K T+ +++ R+ E A + M G+ P+ TY
Sbjct: 332 NSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYG 391
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI LC G++ + +L++ M + P+ +N +I +C+ KA K M+
Sbjct: 392 VLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKN 451
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
G+ P+ SY + I+ L K G+ EAK+ M + G P
Sbjct: 452 GVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 187/378 (49%), Gaps = 17/378 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP+ +Y +I+A ++ ID A + F +M +++ Y I+I+G + G +
Sbjct: 136 MGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKD 195
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L ++M+ +G PN+YTY LI +C +++ F+V + + +R V N T L+
Sbjct: 196 GFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIG 255
Query: 124 GVFRCLDPHKAFELLIRFMER---EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
G+ R KA LL R M+R P T+ N L+ L N +A + L K+ G
Sbjct: 256 GLCRKGQVSKAEGLLER-MKRAHINPTTRTF--NMLMDGLCNTGQLDKALSYLEKLKLIG 312
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIK----RGVKPRFSTYLLLMEALYKAGRD 236
P T++ L++G ++ ++ RG+ P TY +LM ++ D
Sbjct: 313 LCPTLVTYN----ILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRS-DD 367
Query: 237 VEGDRYLNHVFKD-RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
+E + H+ K LV + ++Y ++I C M A+++ + M + + PN V +NT
Sbjct: 368 IEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNT 427
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
+I+G+CK+ +K + L +++ G P+ ++ S I LC+ + +A L EM E G
Sbjct: 428 MINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAG 487
Query: 356 V-PPNTITYNILIRSLCA 372
+ PP ++ + CA
Sbjct: 488 LKPPESLCSKVGQAKSCA 505
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 146/313 (46%), Gaps = 6/313 (1%)
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTV---TCLVTGLDLNETCGILDTFIKRGVKPR 219
N S+ +L +M G P + F YT+ C G D+++ + G+
Sbjct: 120 NGNVSKGFELLAQMETMGVSP--NVFIYTILIEACCRNG-DIDQAKVMFSRMDDLGLAAN 176
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
Y +++ +K G +G + ++ N+ +YN +I +C+ + A ++
Sbjct: 177 QYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFD 236
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
E+ R +A N VT+N LI G C+ +V K LL + P TFN ++D LC
Sbjct: 237 EISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTG 296
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ + AL L ++ G+ P +TYNILI +G+ + L ++M+ ISP T+
Sbjct: 297 QLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYT 356
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
L+ +F R + IEKA + F M +GL PD +Y LI L G EA + + SM +
Sbjct: 357 ILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEM 416
Query: 460 GCNPDSYTSNLIL 472
P+ N ++
Sbjct: 417 HLQPNDVIYNTMI 429
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/487 (22%), Positives = 203/487 (41%), Gaps = 38/487 (7%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
R +AVI+A +S ++ + F+ M + P F++N + + + G +D
Sbjct: 39 RPRDAVINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFT- 97
Query: 71 MEGLGYAP-NVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
E LG +VY++ I I FC V++ F +L M+ V PN L+ R
Sbjct: 98 -EYLGRTQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNG 156
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
D +A + R + L N +Y + N +GY +
Sbjct: 157 DIDQAKVMFSRMDDL-----GLAANQYIYTIMINGFFK-----------KGYKKD----- 195
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
G +L + ++ GV P TY L+ + G+ + + + K
Sbjct: 196 --------GFELYQKMKLV------GVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKR 241
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
+ N +YN++I C+ + +A + M+ I P TFN L+ G C ++ K
Sbjct: 242 GVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKA 301
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
L L G P T+N +I + + + EM + G+ P+ +TY IL+ +
Sbjct: 302 LSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNT 361
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
D+ ++ +F M+ + PD +T+ LI C + +A K + SM+ + L+P+
Sbjct: 362 FVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPN 421
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+ Y+ +I K +A + M +NG P+ + ++ L + G+ EA ++K
Sbjct: 422 DVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLK 481
Query: 490 TSKERGI 496
E G+
Sbjct: 482 EMTEAGL 488
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 142/323 (43%), Gaps = 35/323 (10%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ +G+ P+ YN++I + + LA+ F ++S + TYNILI G+CR G
Sbjct: 203 MKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQ 262
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V +A L+++M+ P T+ +L+DG CN ++ + LE +K +CP T
Sbjct: 263 VSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNI 322
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G ++ N+S+ SE ++R+M DRG
Sbjct: 323 LISG--------------------------------FSKVGNSSVVSE---LVREMEDRG 347
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P T+ + V D+ + + + G+ P TY +L+ L G VE
Sbjct: 348 ISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEAS 407
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + L N YN +I+ +CK +A + EM + PN+ ++ + I
Sbjct: 408 KLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQIL 467
Query: 301 CKDAEVHKTRELLVMLLECGFKP 323
CKD + + + LL + E G KP
Sbjct: 468 CKDGKSIEAKRLLKEMTEAGLKP 490
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 117/244 (47%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+V S+ + I FC+ + + E+ +M ++PN+ + LI C++ ++ + + +
Sbjct: 106 DVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMF 165
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ + G +++ + MI+ + +D + +M GV PN TYN LI C
Sbjct: 166 SRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRD 225
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G ++ + ++F ++ ++ + T+N LI CR ++ KAE M + P ++
Sbjct: 226 GKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTF 285
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ L+ L +G+ D+A ++ G P T N+++ + G ++V+ ++
Sbjct: 286 NMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMED 345
Query: 494 RGIS 497
RGIS
Sbjct: 346 RGIS 349
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 223/499 (44%), Gaps = 13/499 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P R N V+ L + D +++M + +P TYN L+ + G DEA
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262
Query: 65 LRLVKQME--GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM----KERNVCPNEATV 118
L+K+ME G G N TY ++I + ++++ M K + N
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSFTYNPLIT 322
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMG 177
L G + E L ME E + LV N +++ L + A +M
Sbjct: 323 ALLERGFV------QKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMR 376
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
G LP+ T++ + +L E +L + G+ P TY L++ + G
Sbjct: 377 AMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLE 436
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E R + + +V +Y ++++ KV + A E EM + + P+ +NT I
Sbjct: 437 EARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRI 496
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
+ HK +L +++ G PD T+N +ID LC+ +DA D +MV G+
Sbjct: 497 CAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQ 556
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P+ ITY LI + C G ++ + +L M +D + P + T+ LI + CR + A
Sbjct: 557 PDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGW 616
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F ML +G+ P+ +Y+ LI AL ++GR A F M + G P+ YT L+++ +
Sbjct: 617 FRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCR 676
Query: 478 QGRFEEAHDIVKTSKERGI 496
+G + +A + + GI
Sbjct: 677 EGNWADAIRLYFEMHQNGI 695
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 216/475 (45%), Gaps = 9/475 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ--CKPDRFTYNILIHGICRIGVV 61
L I P+ YN ++D+ +K D A + ++M C + TYN++I + R G +
Sbjct: 237 LEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHL 296
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
+ A +LV M L + +TY LI V +V + M+ + P T ++
Sbjct: 297 ENAAKLVDSMR-LSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAI 355
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRG 180
+HG+ + + +A +L M L L+ N++L EA +L + G
Sbjct: 356 IHGLLKS-EQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAG 414
Query: 181 YLPESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
P T++ + C + GL+ E + + +++G P TY +LM +K
Sbjct: 415 LAPTVLTYNTLIDGYCRLGGLE--EARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPM 472
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ + + L + +YN I + +A ++ M + I P+ VT+N +I
Sbjct: 473 AREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIID 532
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G CK + ++L + ++ G +PD T+ +I C +A L+ MV G+ P
Sbjct: 533 GLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQP 592
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ +TY ILI + C G++ + F+KM I P+ T+N LI + CR + A F
Sbjct: 593 SVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHF 652
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
ML GL P+ ++Y+ LI + G + +A + + M QNG PD T N + +
Sbjct: 653 HEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFK 707
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 186/431 (43%), Gaps = 1/431 (0%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN VI L + ++ A M + + K FTYN LI + G V + L +ME
Sbjct: 283 YNVVISFLAREGHLENAAKLVDSMRLSK-KASSFTYNPLITALLERGFVQKVEALQMEME 341
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G P + TY +I G +++V M+ + P+ T S+++G + +
Sbjct: 342 NEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLK 401
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A LL L NTL+ EA + +M ++G P+ T+ +
Sbjct: 402 EALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILM 461
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+L D + +G++P Y + A G + + + +
Sbjct: 462 NGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIY 521
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+ +YN++ID CK + A ++ +M + P+ +T+ LI HC+ + + R+L
Sbjct: 522 PDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKL 581
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L ++ G +P T+ +I CR A +M++ G+ PN ITYN+LI +LC
Sbjct: 582 LNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCR 641
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G + F +M ++P+ YT+ LI CR A + +F M G+ PD +
Sbjct: 642 TGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCT 701
Query: 433 YSALIKALIKS 443
++AL K K
Sbjct: 702 HNALFKGFDKG 712
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 166/388 (42%), Gaps = 46/388 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+ YNA+I L+KS ++ A LKF +M PD TYN +++G C+ G + EA
Sbjct: 344 GIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEA 403
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+ + G AP V TY LIDG+C + E R+ E M E+ P+ T L++G
Sbjct: 404 LWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNG 463
Query: 125 VFR----------------------CL-------------DPHKAFELLIRFMEREPLTQ 149
+ C D HKAF+L M +
Sbjct: 464 SHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPD 523
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVT-----GLDLNET 204
+ N ++ L +A + KM G P+ T+ TCL+ GL L+E
Sbjct: 524 TVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITY----TCLIHAHCERGL-LSEA 578
Query: 205 CGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
+L+ + G++P TY +L+ + G + + + N +YN++I
Sbjct: 579 RKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHA 638
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
C+ A EM +R +APN T+ LI G+C++ L + + G PD
Sbjct: 639 LCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPD 698
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMV 352
T N++ + H + A++ L +V
Sbjct: 699 YCTHNALFKGFDKGHMYH-AIEYLENIV 725
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI P+ YN +I AL ++ LAY F +M P+++TY +LI G CR G +
Sbjct: 623 VGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWAD 682
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGF 90
A+RL +M G P+ T+ L GF
Sbjct: 683 AIRLYFEMHQNGIPPDYCTHNALFKGF 709
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 204/447 (45%), Gaps = 36/447 (8%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
+P+ +TYN LIH +C G V +AL ++ M G AP+V TY IL++ C + +
Sbjct: 4 QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME 63
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
++++M+ PN T L+ G+ D A ELL
Sbjct: 64 LIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELL----------------------- 100
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
R + G P + ++ + L + + ++ ++ P +
Sbjct: 101 ------------RNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEA 148
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
T+ +++ +L + G + + L + K +N+ +YN +I+ C+ +D A + +M
Sbjct: 149 TFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM 208
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
+ P++VT+NTL+ G C A EL+ + + G PD TFN++I LC+
Sbjct: 209 KSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLM 268
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
DA++ +M + G PN+ITY+ +I L + ++L LF +M +PD + L
Sbjct: 269 VDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLL 327
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
+ + IE+A + + G+ P Y+A++ L ++G+ + A M +GC
Sbjct: 328 AECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGC 387
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIV 488
PD T +++E L +G EA +++
Sbjct: 388 MPDDLTYVILIEGLAYEGYLNEARELL 414
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 195/438 (44%), Gaps = 10/438 (2%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ YN +I L + + A M C PD TYNIL+ C+ +A+
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L+ M G PN TY +L+DG C V + +L + P+ +++ G+
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
A EL+ + + N ++Y L + +A +L KM G
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + L +++ G+L G KP TY L++ L A R V+ + +++
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++ + + ++N +I C+ +M A E+ ++M D+ PN +T++T+ISG K +
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 302
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + EL + GF PDK + + +CL E+A+ + ++ + G+ P+T+ YN
Sbjct: 303 LDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNA 361
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
++ LC G ++ + M + PD T+ LI+ + +A + +
Sbjct: 362 ILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLC--- 418
Query: 426 LRPDNFSYSALIKALIKS 443
S L+ +LIKS
Sbjct: 419 ------SRDVLVNSLIKS 430
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 152/286 (53%)
Query: 216 VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRAT 275
V+P TY L+ L + G+ + L+ + +V +YN++++ CK +A
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
E+ MR PN VT+N L+ G C + +V ELL L G KP +N+++ L
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
C A R+ DA + ++EM+ PPN T+N++I SLC G + ++++L +KM + +I
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
T+NA+I C ++ A M + G +PD +Y+ L+K L + R+ +A++ +
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
M QNGC PD+ T N ++ L Q+G +A ++ K ++G + S
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSI 288
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 149/313 (47%)
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P + T++ + L + + +LD + RG P TY +L+EA K +
Sbjct: 5 PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
++ + + N +YN+++D C +D A E+ R + P+ V +NT++ G C
Sbjct: 65 IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 124
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
EL+ +L P++ TFN +I LCR + A+ L +M + G N +T
Sbjct: 125 AERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT 184
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN +I LC +V ++ L KM++ PDI T+N L++ C + AE+ +M
Sbjct: 185 YNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMT 244
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G PDN +++ LI L + G +A + F M GC P+S T + I+ L + + +
Sbjct: 245 QNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLD 304
Query: 483 EAHDIVKTSKERG 495
+A ++ +G
Sbjct: 305 QALELFNEMGHKG 317
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 219/476 (46%), Gaps = 3/476 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P + N I LV N +D A ++M + + P+ TYN LI G C + +++A
Sbjct: 199 GIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDA 258
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE-IMKERNVCPNEATVRSLVH 123
L+ +M G +P+ +Y ++ C KR+ E+ ++E ++K+ N+ P++ T + VH
Sbjct: 259 XELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVH 318
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + +A E L ER K+ + +++ +A I+ +M +G +P
Sbjct: 319 MLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIP 378
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ + L +++ +L K G KP +Y L+ L K G +E +
Sbjct: 379 DVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMM 438
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
N + + N +Y++++ F + A ++ REM + P V N LI C++
Sbjct: 439 NMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQE 498
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V + + + L G + F ++I C+ E AL L +M P+ +TY
Sbjct: 499 EKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTY 558
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+I +L G + + +L KM P T+ +I +CRM ++E K ML+
Sbjct: 559 TTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLS 618
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+ +Y+ +I+ L G ++A + + + D+ T ++++E+ + +G
Sbjct: 619 --RQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKG 672
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 202/445 (45%), Gaps = 40/445 (8%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
+PD N IH + +D+A+R +++M+ + PNV TY LI G+C+ R+ +
Sbjct: 201 EPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXE 260
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPH-KAFELLIRFMEREP--LTQKLVCNTLLY 158
++ M + P++ + +++ F C + K LL+ M ++ L ++ NT ++
Sbjct: 261 LIAEMPFKGCSPDKISYYTVMG--FLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVH 318
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
LS + EA LR+ +R + + + I+ +F + G
Sbjct: 319 MLSKHGHGDEALEFLREAEERRFRVDKVGYS----------------AIVHSFCREG--- 359
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
R + +N +F + +V +Y VI+ C+ +D+A ++
Sbjct: 360 ----------------RMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKML 403
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
R+M PN V++ L++G CK+ + RE++ M E + P+ T++ ++ R
Sbjct: 404 RQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRRE 463
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
+ +A D + EM++ G P + N+LI+SLC V + R ++ + + ++ F
Sbjct: 464 GKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNF 523
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+I FC+ + +E A M PD +Y+ +I AL K GR +EA + + M +
Sbjct: 524 TTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLR 583
Query: 459 NGCNPDSYTSNLILETLVQQGRFEE 483
G P T ++ + GR E+
Sbjct: 584 VGWIPTPVTYRTVIHQYCRMGRVED 608
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 165/346 (47%), Gaps = 1/346 (0%)
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
+V +L LS + A +LR M R F Y + L L
Sbjct: 135 IVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTM 194
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
K G++P S + L R + R+L + + NV +YN +I +C ++
Sbjct: 195 MQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHR 254
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL-VMLLECGFKPDKFTFN 329
++ A E+ EM + +P+ +++ T++ CK+ + + R L+ ML + PD+ T+N
Sbjct: 255 LEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYN 314
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+ + L + ++AL+ L E E + + Y+ ++ S C G + ++ + +M +
Sbjct: 315 TFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSK 374
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
PD+ T+ ++I C+ K+++A+K M G +P+ SY+AL+ L K+G EA
Sbjct: 375 GCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEA 434
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
++ E+ P++ T ++++ ++G+ EA D+V+ ++G
Sbjct: 435 REMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKG 480
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 195/444 (43%), Gaps = 38/444 (8%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
+P+ F Y ++ + R G + A+R + M+ G P++ I R+ + R
Sbjct: 168 RPEAFGYVMVSYS--RAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVR 225
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
LE M+ + PN T L+ G C+ L+RL
Sbjct: 226 FLERMQIVEIXPNVITYNCLIKGY---------------------------CD--LHRLE 256
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK-RGVKPRF 220
+ A ++ +M +G P+ ++ + L + E +++ +K + P
Sbjct: 257 D------AXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQ 310
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY + L K G E +L + R + Y+ ++ FC+ MD+A EI E
Sbjct: 311 VTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNE 370
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M + P++VT+ ++I+G C++ +V + +++L + + G KP+ ++ ++++ LC+
Sbjct: 371 MFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGN 430
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
+A + ++ E PN ITY++L+ G + + L ++M P N
Sbjct: 431 SLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINL 490
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LIQS C+ K+++A++ L G + +++ +I + + A M +
Sbjct: 491 LIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSN 550
Query: 461 CNPDSYTSNLILETLVQQGRFEEA 484
+PD T I++ L ++GR EEA
Sbjct: 551 KHPDVVTYTTIIDALGKKGRIEEA 574
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 183/426 (42%), Gaps = 18/426 (4%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YN + L K D A ++ + + D+ Y+ ++H CR G +D+A +
Sbjct: 308 PDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEI 367
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
V +M G P+V TYT +I+G C ++V + ++L M + PN + +L++G+ +
Sbjct: 368 VNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCK 427
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ +A E++ E + + + L++ +SEA ++R+M +G+ P
Sbjct: 428 NGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVE 487
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEAL-----YKAGRDVEGDRY 242
+ + L ++E ++ + G + ++ +A + D Y
Sbjct: 488 INLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 547
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L++ D V +Y +ID K ++ AT++ +M P VT+ T+I +C+
Sbjct: 548 LSNKHPD-----VVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCR 602
Query: 303 DAEVHKTRELLVMLL---ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
V +LL +L EC + +N +I+ LC E A L +++ +
Sbjct: 603 MGRVEDLLKLLEKMLSRQEC-----RTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKID 657
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
T ++LI S + G S + +M + PD+ + + K E+A+K
Sbjct: 658 ANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLIL 717
Query: 420 SMLTLG 425
+ G
Sbjct: 718 RFVERG 723
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 71/163 (43%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
++ D + +M++ L + + A L M + + + ++ S G + ++
Sbjct: 130 YRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAM 189
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
R MQ I PD+ N I N+++KA + M + + P+ +Y+ LIK
Sbjct: 190 RXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGY 249
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
R ++A + M GC+PD + ++ L ++ R +E
Sbjct: 250 CDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKE 292
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 58/145 (40%)
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
+W + I Y ++ L + R+ + M RI F ++ S+ R K+
Sbjct: 127 QWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLR 186
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
A + M G+ PD + I L+ R D+A + M+ P+ T N ++
Sbjct: 187 NAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLI 246
Query: 473 ETLVQQGRFEEAHDIVKTSKERGIS 497
+ R E+A +++ +G S
Sbjct: 247 KGYCDLHRLEDAXELIAEMPFKGCS 271
>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
Length = 554
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 215/484 (44%), Gaps = 27/484 (5%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
RLY A V S+ +A+ + M + G + EA +V +
Sbjct: 84 RLYVTAATAFVARGSLPMAHEVMRGM---------------VAAFGEAGRLPEAADMVLE 128
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M G V T ++ +V + M VCP+E + R+LV C
Sbjct: 129 MRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALV---VVCCR 185
Query: 131 PHKAFEL--LIRFMEREPLT-QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
K E+ L+ M R + C ++ L + + R+M + G P
Sbjct: 186 EGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVN 245
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR-YLNHV 246
+ + L + + +L+ + RG+KP T+ L++ L K G R +L +
Sbjct: 246 YTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLI 305
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
NV++Y ++I +C+ + RA + M ++ + PN T+ TLI GHCK
Sbjct: 306 KSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSF 365
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ EL+ + + GF P+ +T+N++ID C+ + ++A L G+ + ITY IL
Sbjct: 366 DRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTIL 425
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I C G + +L LF +M + PDI + +LI ++C+ ++E+++K F L +GL
Sbjct: 426 ITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGL 485
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY---TSNLILETLVQQGRFEE 483
P +Y+++I K GR A + F M QNGC DS ++N++ T + E
Sbjct: 486 LPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNGCFADSILMCSNNVVSAT--RHSPLHE 543
Query: 484 AHDI 487
AH +
Sbjct: 544 AHGL 547
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 120/243 (49%), Gaps = 1/243 (0%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
S+ ++ C+ ++ + M + + T ++ C+ E +
Sbjct: 175 SFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRM 234
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
LE G P+ + + ID LC+ + A L EMV G+ PN T+ LI LC IG
Sbjct: 235 LEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWT 294
Query: 377 ARSLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
R+ RLF K+ ++ P+++T+ +I +CR K+ +AE M+ GL+P+ +Y+
Sbjct: 295 ERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTT 354
Query: 436 LIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
LI K G FD A + M+Q G P+ YT N +++ ++G+ +EA+ +++ + +G
Sbjct: 355 LIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQG 414
Query: 496 ISF 498
+ F
Sbjct: 415 LKF 417
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 157/382 (41%), Gaps = 34/382 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P R + A++ + ++ M D T +++ +C G +
Sbjct: 168 GVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDV 227
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++M +G PNV YT IDG C + V + F VLE M R + PN T +L+ G
Sbjct: 228 SEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDG 287
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF L ++ ++ Y P
Sbjct: 288 LCKIGWTERAFRLFLKLIK----------------------------------SSSYKPN 313
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L +L +++G+KP +TY L+ K G +N
Sbjct: 314 VHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMN 373
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ + N+ +YN VID FCK + A ++ R + + + +T+ LI+ HCK
Sbjct: 374 KMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQG 433
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +L ++E G PD + S+I C+ + E++ + + G+ P TY
Sbjct: 434 HITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYT 493
Query: 365 ILIRSLCAIGDVARSLRLFQKM 386
+I C +G +LR+F++M
Sbjct: 494 SMIAGYCKVGRSTMALRVFERM 515
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 130/300 (43%), Gaps = 36/300 (12%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P+ Y A ID L K + A+ ++M KP+ +T+ LI G+C+IG +
Sbjct: 237 MGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTER 296
Query: 64 ALRL-VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A RL +K ++ Y PNV+TYT++I G+C ++A +L M E+ + PN T +L+
Sbjct: 297 AFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLI 356
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G + +AFEL + KM G+L
Sbjct: 357 GGHCKGGSFDRAFEL-----------------------------------MNKMKQEGFL 381
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T++ + + E +L +G+K TY +L+ K G
Sbjct: 382 PNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDL 441
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + ++ ++ +Y +I +C+ M+ + + + + P T+ ++I+G+CK
Sbjct: 442 FDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCK 501
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YNAVID K I AY + + K D+ TY ILI C+ G + A
Sbjct: 379 GFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYA 438
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M G P++ YT LI +C +++ E + + + P + T S++ G
Sbjct: 439 LDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAG 498
Query: 125 ---VFRCLDPHKAFELLIR 140
V R + FE +++
Sbjct: 499 YCKVGRSTMALRVFERMVQ 517
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 226/499 (45%), Gaps = 41/499 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L + P+TR N ++ L + S L F+Q+ P+ FT+NI+I +C+ G + E
Sbjct: 151 LRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNIVIDFLCKEGELAE 206
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L +M+ +G P+V T+ LIDG+ + EV +++E M+ + T +L++
Sbjct: 207 ARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALIN 266
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ A+ M+RE + +V +T + + EA + +M RG
Sbjct: 267 CFCKFGRMETAYGYFAA-MKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGM- 324
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+ ++T TCL+ G TC KAGR +
Sbjct: 325 ---ALNEFTYTCLIDG-----TC--------------------------KAGRLDDAIVL 350
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L+ + + + NV +Y +++D CK + A ++ R M + N + + TLI GH
Sbjct: 351 LDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFM 410
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ K LL + G + D + ++I LC H+ ++A L++M E G+ PN I
Sbjct: 411 NKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYII 470
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y ++ + G V ++ + QK+ P++ T+ ALI C+ I++A F M
Sbjct: 471 YTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMR 530
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
LGL P+ +Y+AL+ L K+G +EA Q F M G + D +L+ ++QG
Sbjct: 531 DLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLH 590
Query: 483 EAHDIVKTSKERGISFKSF 501
+A + + G+ F
Sbjct: 591 DAFALKAKMIDSGLQLDLF 609
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 180/389 (46%), Gaps = 2/389 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ + ++ +DA K + A F QM V + FTY LI G C+ G +D+A
Sbjct: 288 GVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDA 347
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M G NV TYT+L+DG C ++VAE VL +M++ V NE +L+HG
Sbjct: 348 IVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHG 407
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F + KA LL + + L+ L N EA ++L KM + G P
Sbjct: 408 HFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPN 467
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + E +L + G +P TY L++ L KAG E + N
Sbjct: 468 YIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFN 527
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L NV +Y ++D CK ++ A ++ EM + ++ + V + L+ G+ K
Sbjct: 528 KMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQG 587
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+H L +++ G + D F + I C + +A + SEM+ G+ P+ YN
Sbjct: 588 NLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYN 647
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISP 393
LI +G++ ++ L +M+ R+ P
Sbjct: 648 CLISKYQKLGNLEEAISLQDEME--RVLP 674
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 195/403 (48%), Gaps = 2/403 (0%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YNA+I+ K ++ AY F M + + T++ + C+ G+V EA++L QM
Sbjct: 261 YNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMR 320
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G A N +TYT LIDG C A R+ + +L+ M + V N T LV G+ +
Sbjct: 321 VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVA 380
Query: 133 KAFELLIRFMEREPL-TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
+A E ++R ME+ + +L+ TL++ N + +A +L +M ++G + S +
Sbjct: 381 EA-EDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ L L+E +L + G++P + Y +M+A +K+G+ E L +
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
NV +Y +ID CK +D A +MRD + PN+ + L+ G CK+ +++ +
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
L ++ G DK + +++D + DA ++M++ G+ + Y I C
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC 619
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
+ + + +F +M I+PD +N LI + ++ +E+A
Sbjct: 620 NLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEA 662
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ + Y A++D L K+ ++ A F +M D+ Y L+ G + G + +
Sbjct: 532 LGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHD 591
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A L +M G +++ YT I GFCN + E V M + P+ A L+
Sbjct: 592 AFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650
>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 217/481 (45%), Gaps = 39/481 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G + +N +I AL K + A + P+ T+N++I G ++G +D A
Sbjct: 158 GYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLA 217
Query: 65 LRLVKQME---GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
L+LV++ME G P+ TY ++GFC +A + M + + PN T +L
Sbjct: 218 LKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATL 277
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
V G R AF L C+ L+ ++G
Sbjct: 278 VDGYTRVGSLENAFRL---------------CDELV--------------------EKGL 302
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
LP S ++ + L D+ +L I + + P TY +++E L + G E +
Sbjct: 303 LPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFK 362
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+L + + LV + S+N+VI+ C+ N + A ++ M R + P++VTF TLI HC
Sbjct: 363 FLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHC 422
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
KD +V ++ +++ G KP+ +NS+I+ + F+ A+ + + G+ + +
Sbjct: 423 KDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF-DVV 481
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN LI C G + ++ LF +M+ I T+N LI S C+ + +A++ M
Sbjct: 482 TYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMM 541
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ GL PD +Y+ LI + K +E + M G PD T ++ L+Q+
Sbjct: 542 VLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEESV 601
Query: 482 E 482
E
Sbjct: 602 E 602
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 156/329 (47%), Gaps = 9/329 (2%)
Query: 174 RKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
++M GY+ +TF+ + L L E ++ +K G+ P T+ ++++ K
Sbjct: 152 KEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKM 211
Query: 234 GRDVEGDRYLNHVFKDRLVSNVN------SYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
G D L V K ++S + +YN ++ FCK+ + A E +EM ++I
Sbjct: 212 G---AMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIE 268
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
PN+ T+ TL+ G+ + + L L+E G P+ +NS+I L E A
Sbjct: 269 PNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLL 328
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
LS+M++ + P+ TY+I+I LC G + + + Q + + D ++ N +I CR
Sbjct: 329 LSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCR 388
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
N + A++ +M GL PD ++ LI K G+ + A Q + M + G P+
Sbjct: 389 SNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLI 448
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERGI 496
N ++ ++G F+ A ++ T + G+
Sbjct: 449 YNSVINGFAKEGSFDPAILLIDTLRRMGL 477
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 122/256 (47%), Gaps = 3/256 (1%)
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
D V+++N + K+N ++R ++ +EM N+ TFN +I K+ + +
Sbjct: 122 DGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVE 181
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM-VEWG--VPPNTITYNI 365
++ L+ G P+ TFN +ID + + AL + +M V G V P+++TYN
Sbjct: 182 AVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNS 241
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+ C IG++A + ++M I P++ T+ L+ + R+ +E A + ++ G
Sbjct: 242 FVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKG 301
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
L P++ Y+++I L G + A M PD +T ++++E L + G EA
Sbjct: 302 LLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAF 361
Query: 486 DIVKTSKERGISFKSF 501
++ E + +F
Sbjct: 362 KFLQMILEMSLVRDAF 377
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 87/196 (44%), Gaps = 25/196 (12%)
Query: 331 MIDCLCRAHRFEDALDCLSEMVEW-GVPPNTI------TYNI----------LIRSLCAI 373
+I L + R++DAL + ++ G+ P + +Y+I L+R+ I
Sbjct: 47 VIHVLVNSKRYDDALFIMGNLMNVNGISPLEVLDALISSYDICKSSPAVFDALVRTCTQI 106
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G + + K+Q D ++ +N + ++N + + K + M++ G + ++
Sbjct: 107 GATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTF 166
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK---- 489
+ +I AL K GR EA + G P+ T N+I++ ++ G + A +V+
Sbjct: 167 NLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEV 226
Query: 490 ----TSKERGISFKSF 501
+ K +++ SF
Sbjct: 227 MSGCSVKPDSVTYNSF 242
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 221/484 (45%), Gaps = 51/484 (10%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N +I + + A F +++ P T+N L+HG+C V EAL L QM
Sbjct: 18 FNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM- 76
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
PNV T+T L++G C RV E +L+ M E + PN+ T ++V G+ + D
Sbjct: 77 ---CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 133
Query: 133 KAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
A LL + E + +V + ++ L + ++A + +M D+G P+ T+
Sbjct: 134 SALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY--- 190
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+C++ G C +G+ E R L + ++
Sbjct: 191 -SCMINGF-----C--------------------------SSGKWSEAQRLLQEMLVRKI 218
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC-----KDA-E 305
+V +++ +I+ K ++ A ++ +EM + PN+VT NTL+ G C KDA E
Sbjct: 219 SPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALE 278
Query: 306 VHKTRELLVMLLEC-----GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ K + +M ++ G +PD T+N +I L +F +A + EM G+ P+T
Sbjct: 279 MFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 338
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TY+ +I LC + + ++F M + SP+I TFN LI +C+ ++ + F
Sbjct: 339 VTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCE 398
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G+ + +Y LI+ K G + + F M +G PD+ T +L L +
Sbjct: 399 MGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEE 458
Query: 481 FEEA 484
++A
Sbjct: 459 LKKA 462
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 196/428 (45%), Gaps = 26/428 (6%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P+ +N ++ L + + A F QM CKP+ T+ L++G+CR G V E
Sbjct: 44 LGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVE 99
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE-RNVCPNEATVRSLV 122
A+ L+ +M G PN TY ++DG C +L M+E ++ P+ +++
Sbjct: 100 AVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAII 159
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+++ A L I ++ + + ++ ++ SEA +L++M R
Sbjct: 160 DGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKIS 219
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR------- 235
P+ TF + LV DLN +L I GV P T L++ L +G+
Sbjct: 220 PDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEM 279
Query: 236 ---------DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
D++ N V D V +YN++I A E+ EM R I
Sbjct: 280 FKAMQKSMMDIDATHAFNGVEPD-----VQTYNILISGLINEGKFLEAEELYEEMPHRGI 334
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P+ VT++++I+G CK + + + ++ + F P+ TFN++I C+A +D L+
Sbjct: 335 VPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLE 394
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
EM G+ N ITY LIR +G++ SL +FQ+M + + PD T ++
Sbjct: 395 LFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLW 454
Query: 407 RMNKIEKA 414
+++KA
Sbjct: 455 SKEELKKA 462
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 208/468 (44%), Gaps = 49/468 (10%)
Query: 40 QCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV 99
Q D +++NILI C + AL ++ LG+ P + T+ L+ G C RV+E
Sbjct: 10 QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69
Query: 100 FRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
+ M + PN T +L++G+ R +A LL R +E ++ T++
Sbjct: 70 LDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
+ A +LRKM + + +KP
Sbjct: 126 MCKMGDTVSALNLLRKMEELSH----------------------------------IKPD 151
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
Y +++ L+K GR + + + ++ +Y+ +I+ FC A + +
Sbjct: 152 VVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQ 211
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
EM R I+P++VTF+ LI+ K+ +++ ++LL ++ G P+ T N+++D LC +
Sbjct: 212 EMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSG 271
Query: 340 RFEDALDCLSEMVEW-----------GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+ +DAL+ M + GV P+ TYNILI L G + L+++M
Sbjct: 272 KLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 331
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
I PD T++++I C+ +++++A + F SM + P+ +++ LI K+G D+
Sbjct: 332 RGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDD 391
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ F M + G ++ T ++ + G + DI + G+
Sbjct: 392 GLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGV 439
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 183/384 (47%), Gaps = 25/384 (6%)
Query: 5 GISPSTRLYNAVIDALVK-SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G+ P+ Y ++D + K +++ L + + KPD Y+ +I G+ + G +
Sbjct: 111 GLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTD 170
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L +M+ G P++ TY+ +I+GFC++ + +E R+L+ M R + P+ T L++
Sbjct: 171 AQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLIN 230
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + D + A +LL + + CNTLL L ++ +A + + M
Sbjct: 231 ALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM------- 283
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ S D I T GV+P TY +L+ L G+ +E +
Sbjct: 284 QKSMMD-----------------IDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELY 326
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +V + +Y+ +I+ CK + +D AT++ M + +PN+VTFNTLI+G+CK
Sbjct: 327 EEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKA 386
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V EL + G + T+ ++I + +LD EM+ GV P+TIT
Sbjct: 387 GMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITI 446
Query: 364 NILIRSLCAIGDVARSLRLFQKMQ 387
++ L + ++ ++L + +++Q
Sbjct: 447 RNMLTGLWSKEELKKALAMLEELQ 470
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 164/341 (48%), Gaps = 16/341 (4%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A + K+ G+ P TF+ + L ++E LD F + KP T+ LM
Sbjct: 34 ALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA---LDLF-HQMCKPNVVTFTTLMN 89
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD-RDIA 287
L + GR VE L+ + +D L N +Y ++D CK+ A + R+M + I
Sbjct: 90 GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIK 149
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
P++V ++ +I G KD + L + + + G PD T++ MI+ C + ++ +A
Sbjct: 150 PDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRL 209
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
L EM+ + P+ +T++ LI +L GD+ + L Q+M + + P++ T N L+ C
Sbjct: 210 LQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCD 269
Query: 408 MNKIEKAEKAFFSMLTL-----------GLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
K++ A + F +M G+ PD +Y+ LI LI G+F EA++ + M
Sbjct: 270 SGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 329
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G PD+ T + ++ L +Q R +EA + + + S
Sbjct: 330 PHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFS 370
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 7/222 (3%)
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
I ++ +FN LI C +++ L + GF P TFN+++ LC R +AL
Sbjct: 11 IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
D +M + PN +T+ L+ LC G V ++ L +M D + P+ T+ ++
Sbjct: 71 DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126
Query: 406 CRMNKIEKAEKAFFSMLTLG-LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
C+M A M L ++PD YSA+I L K GR +A+ F+ M+ G PD
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGIS--FKSFPGL 504
T + ++ G++ EA +++ R IS +F GL
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGL 228
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 80/175 (45%)
Query: 2 SFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
+F G+ P + YN +I L+ A +++M PD TY+ +I+G+C+ +
Sbjct: 295 AFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRL 354
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
DEA ++ M ++PN+ T+ LI G+C A V + + M R + N T +L
Sbjct: 355 DEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITL 414
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
+ G + + + + ++ + + +L L + +A A+L ++
Sbjct: 415 IRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 222/497 (44%), Gaps = 39/497 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ YN V+D L K+ ++ A M+++ C PD +YN +++G+ + G +DEA +
Sbjct: 589 PNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWM 648
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR-VLEIMKERNVCPNEATVRSLVHGVF 126
QM+ + AP+ T ++ F + + E V E + + + + ++V SL+ G+
Sbjct: 649 FCQMKKV-LAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGIL 707
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ K+ E L L + ++ + A A +++K + G ++
Sbjct: 708 KRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTG 767
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKR-GVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+++ + C + DL + L + +KR G P TY L+++A+ K+ R + +
Sbjct: 768 SYN-ALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEE 826
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ S +YN +I K M+D A + ++ +P T+ L+ G KD
Sbjct: 827 MHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGN 886
Query: 306 VHKTRELLVMLLECG-----------------------------------FKPDKFTFNS 330
+ L +LECG PD ++
Sbjct: 887 IEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTV 946
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+ID LC R D L ++ + G+ P+ ITYN+LI L G + +L L+ M+
Sbjct: 947 VIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG 1006
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
I+P++YT+N+LI + K +A K + +L G +P+ F+Y+ALI+ SG + A
Sbjct: 1007 IAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAF 1066
Query: 451 QTFLSMEQNGCNPDSYT 467
+ M GC P+S T
Sbjct: 1067 AAYGRMIVGGCRPNSST 1083
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 221/486 (45%), Gaps = 3/486 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ R Y+ ++ A K + +M +P+ ++Y I I + + G ++EA
Sbjct: 201 GVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEA 260
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++++ME G P+V T T+LI C+A R+A+ V MK + P+ T +L+
Sbjct: 261 YRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDK 320
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTL-LYRLSNNSMASEAAAILRKMGDRGYLP 183
D E+ ++ + +V T + L EA + +M +G +P
Sbjct: 321 CGDSGDSRSVSEIW-NALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIP 379
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ +++ ++ + N + + G P T++L + K+G ++ +
Sbjct: 380 QQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRY 439
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +V +V + N V+ K + A + E++ I+P+ +T+ +I K
Sbjct: 440 ELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKA 499
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + ++ ++E PD NS+ID L +A R +A E+ E + P TY
Sbjct: 500 SNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTY 559
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L+ L G V ++L + M ++ P+I T+N ++ C+ ++ A +SM
Sbjct: 560 NTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTM 619
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G PD SY+ ++ L+K GR DEA F M++ PD T IL + V+ G +E
Sbjct: 620 NGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKE 678
Query: 484 AHDIVK 489
A V+
Sbjct: 679 ALHTVR 684
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 212/480 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + YN +I LVKS A ++ M+ D P TY++L+ + +
Sbjct: 166 GIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETV 225
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +ME G PNVY+YTI I A R+ E +R+L M+E P+ T L+
Sbjct: 226 VGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQI 285
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A ++ + + ++ TLL + ++ + + I + GY
Sbjct: 286 LCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDN 345
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ V L ++E + D ++G+ P+ +Y L+ KA R N
Sbjct: 346 VVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFN 405
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
H+ N ++ + I+ K +A + M+ + I P++V N ++ G K
Sbjct: 406 HMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTG 465
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + L G PD T+ MI C +A ++A+ +EM+E P+ + N
Sbjct: 466 RLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMN 525
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI L G + ++F +++ + P T+N L+ R K+++ + M +
Sbjct: 526 SLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSN 585
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
P+ +Y+ ++ L K+G + A SM NGC PD + N ++ LV++GR +EA
Sbjct: 586 SFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEA 645
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 127/527 (24%), Positives = 225/527 (42%), Gaps = 35/527 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P NAV+ L K+ + +A F ++ PD TY ++I + DEA
Sbjct: 446 GIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEA 505
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ +M AP+V LID A R E +++ +KE N+ P + T +L+ G
Sbjct: 506 MKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAG 565
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R + +LL + NT+L L N + A +L M G +P+
Sbjct: 566 LGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPD 625
Query: 185 SSTFDYTVTCLVTGLDLNET------------------CGILDTFIKRGV-KPRFST--- 222
S+++ + LV L+E C IL +F++ G+ K T
Sbjct: 626 LSSYNTVMYGLVKEGRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVRE 685
Query: 223 YLL-------------LMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
Y+L LME + K + + ++ L+ + + +I FCK
Sbjct: 686 YILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHK 745
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
A E+ ++ + ++ ++N LI G + + EL + G PD+FT++
Sbjct: 746 EALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYH 805
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++D + ++ R ED L EM G +TYN +I L + ++ L+ ++ ++
Sbjct: 806 LILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSE 865
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
SP T+ L+ + IE AE F ML G P+ Y+ L+ +G ++
Sbjct: 866 GFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKV 925
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ F SM + G NPD + ++++TL GR + K + G+
Sbjct: 926 CELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGL 972
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 197/451 (43%), Gaps = 2/451 (0%)
Query: 46 FTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEI 105
+TYN LI+ + + G EA+ + K M G P V TY++L+ F + V +L
Sbjct: 172 YTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGE 231
Query: 106 MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNS 164
M+ R V PN + + + + +A+ +L R ME E +V NT+L + L +
Sbjct: 232 MEARGVRPNVYSYTICIRVLGQAGRLEEAYRIL-RKMEEEGCKPDVVTNTVLIQILCDAG 290
Query: 165 MASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYL 224
++A + KM P+ T+ + D I + G +Y
Sbjct: 291 RLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYT 350
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
++AL + GR E + + + ++ SYN +I F K + +RA E+ M
Sbjct: 351 AAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIH 410
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
PN T I+ H K E K + ++ G PD N+++ L + R A
Sbjct: 411 GPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMA 470
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
E+ G+ P+ ITY ++I+ + ++++F +M +R +PD+ N+LI
Sbjct: 471 KRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDM 530
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+ + +A K F+ + + L P + +Y+ L+ L + G+ E Q M N P+
Sbjct: 531 LYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPN 590
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
T N +L+ L + G A D++ + G
Sbjct: 591 IITYNTVLDCLCKNGEVNYALDMLYSMTMNG 621
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 118/538 (21%), Positives = 234/538 (43%), Gaps = 49/538 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y I L ++ ++ AY ++M + CKPD T +LI +C G + +A
Sbjct: 236 GVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADA 295
Query: 65 LRLVKQMEGL-----------------------------------GYAPNVYTYTILIDG 89
+ +M+ GY NV +YT +D
Sbjct: 296 KDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDA 355
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C RV E V + MK++ + P + + SL+ G + ++A EL P
Sbjct: 356 LCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPN 415
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRK---MGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
T + ++ + + E+ L++ M +G +P+ + + L L
Sbjct: 416 GY---THVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKR 472
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+ G+ P TY ++++ KA E + + ++R +V + N +ID
Sbjct: 473 VFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLY 532
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K + A +I E+++ ++ P T+NTL++G ++ +V + +LL + F P+
Sbjct: 533 KAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNII 592
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+N+++DCLC+ ALD L M G P+ +YN ++ L G + + +F +M
Sbjct: 593 TYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQM 652
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN----FSYSALIKALIK 442
+ ++PD T ++ SF R +++A ++ L+PD+ S +L++ ++K
Sbjct: 653 K-KVLAPDYATVCTILPSFVRSGLMKEA---LHTVREYILQPDSKVDRSSVHSLMEGILK 708
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+++ + ++ +G D + I+ + AH++VK + G+S K+
Sbjct: 709 RDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKT 766
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 182/434 (41%), Gaps = 35/434 (8%)
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCN 154
RV +V +V ++M+ + + N T ++ V A L E + N
Sbjct: 116 RVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYN 175
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
L+Y L + EA + + M G +P T+ + D G+L R
Sbjct: 176 GLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEAR 235
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
GV+P +Y + + L +AGR E R L + ++ +V + ++I C + A
Sbjct: 236 GVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADA 295
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
++ +M+ D P+ VT+ TL+ + E+ L G+ + ++ + +D
Sbjct: 296 KDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDA 355
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI--------------------- 373
LC+ R ++ALD EM + G+ P +YN LI
Sbjct: 356 LCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPN 415
Query: 374 --------------GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
G+ ++L+ ++ M++ I PD+ NA++ + ++ A++ F
Sbjct: 416 GYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFH 475
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+ +G+ PDN +Y+ +IK K+ DEA + F M +N C PD N +++ L + G
Sbjct: 476 ELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAG 535
Query: 480 RFEEAHDIVKTSKE 493
R EA I KE
Sbjct: 536 RGNEAWKIFYELKE 549
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 159/360 (44%), Gaps = 35/360 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+S T YNA+I LV + ID+A F +M C PD FTY++++ + + +++
Sbjct: 760 LGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIED 819
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L++ ++M GY TY +I G +K + E + + P T L+
Sbjct: 820 MLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLD 879
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + + +A A+ +M + G P
Sbjct: 880 GLLK-----------------------------------DGNIEDAEALFDEMLECGCEP 904
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + D + C + ++ +++G+ P +Y ++++ L GR +G Y
Sbjct: 905 NCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYF 964
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ L ++ +YN++I K ++ A + +M + IAPNL T+N+LI K
Sbjct: 965 KQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKA 1024
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + ++ LL G+KP+ FT+N++I + E+A M+ G PN+ TY
Sbjct: 1025 GKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 123/290 (42%), Gaps = 35/290 (12%)
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+L+ + R+V S N +++ + ++ M+ + I N+ TF T+
Sbjct: 88 FLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVG 147
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ + L ++ E G + +T+N +I L ++ +A+D M GV P
Sbjct: 148 VEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVR 207
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY++L+ + D + L +M+A + P++Y++ I+ + ++E+A + M
Sbjct: 208 TYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKM 267
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP------------------ 463
G +PD + + LI+ L +GR +AK F M+ + P
Sbjct: 268 EEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDS 327
Query: 464 ------------DSYTSNLI-----LETLVQQGRFEEAHDIVKTSKERGI 496
D Y N++ ++ L Q GR +EA D+ K++GI
Sbjct: 328 RSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGI 377
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 226/499 (45%), Gaps = 41/499 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
L + P+TR N ++ L + S L F+Q+ P+ FT+NI+I +C+ G + E
Sbjct: 151 LRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNIVIDFLCKEGELAE 206
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L +M+ +G P+V T+ LIDG+ + EV +++E M+ + T +L++
Sbjct: 207 ARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALIN 266
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ A+ M+RE + +V +T + + EA + +M RG
Sbjct: 267 CFCKFGRMETAYGYFAA-MKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGM- 324
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+ ++T TCL+ G TC KAGR +
Sbjct: 325 ---ALNEFTYTCLIDG-----TC--------------------------KAGRLDDAIVL 350
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L+ + + + NV +Y +++D CK + A ++ R M + N + + TLI GH
Sbjct: 351 LDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFM 410
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ K LL + G + D + ++I LC H+ ++A L++M E G+ PN I
Sbjct: 411 NKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYII 470
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y ++ + G V ++ + QK+ P++ T+ ALI C+ I++A F M
Sbjct: 471 YTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMR 530
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
LGL P+ +Y+AL+ L K+G +EA Q F M G + D +L+ ++QG
Sbjct: 531 DLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLH 590
Query: 483 EAHDIVKTSKERGISFKSF 501
+A + + G+ F
Sbjct: 591 DAFALKAKMIDSGLQLDLF 609
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 180/389 (46%), Gaps = 2/389 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ + ++ +DA K + A F QM V + FTY LI G C+ G +D+A
Sbjct: 288 GVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDA 347
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M G NV TYT+L+DG C ++VAE VL +M++ V NE +L+HG
Sbjct: 348 IVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHG 407
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F + KA LL + + L+ L N EA ++L KM + G P
Sbjct: 408 HFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPN 467
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + E +L + G +P TY L++ L KAG E + N
Sbjct: 468 YIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFN 527
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L NV +Y ++D CK ++ A ++ EM + ++ + V + L+ G+ K
Sbjct: 528 KMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQG 587
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+H L +++ G + D F + I C + +A + SEM+ G+ P+ YN
Sbjct: 588 NLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYN 647
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISP 393
LI +G++ ++ L +M+ R+ P
Sbjct: 648 CLISKYQKLGNLEEAISLQDEME--RVLP 674
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 195/403 (48%), Gaps = 2/403 (0%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YNA+I+ K ++ AY F M + + T++ + C+ G+V EA++L QM
Sbjct: 261 YNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMR 320
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G A N +TYT LIDG C A R+ + +L+ M + V N T LV G+ +
Sbjct: 321 VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVA 380
Query: 133 KAFELLIRFMEREPL-TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
+A E ++R ME+ + +L+ TL++ N + +A +L +M ++G + S +
Sbjct: 381 EA-EDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ L L+E +L + G++P + Y +M+A +K+G+ E L +
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
NV +Y +ID CK +D A +MRD + PN+ + L+ G CK+ +++ +
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
L ++ G DK + +++D + DA ++M++ G+ + Y I C
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC 619
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
+ + + +F +M I+PD +N LI + ++ +E+A
Sbjct: 620 NLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEA 662
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ + Y A++D L K+ ++ A F +M D+ Y L+ G + G + +
Sbjct: 532 LGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHD 591
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A L +M G +++ YT I GFCN + E V M + P+ A L+
Sbjct: 592 AFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 205/443 (46%), Gaps = 41/443 (9%)
Query: 2 SFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
SF I P+ +N VI AL + ++D A F+ MS C D +TY+ L+HG+C G +
Sbjct: 167 SFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRI 226
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
DEA+ L+ +M+ G PN + +LI C ++ ++++ M + PNE T SL
Sbjct: 227 DEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSL 286
Query: 122 VHGVFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
VHG+ CL KA LL R + + + + TL+ + A + +L + ++
Sbjct: 287 VHGL--CLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEK 344
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
GY RG + +S+ L+ L+K G+ G
Sbjct: 345 GY--------------------------------RGNEFSYSS---LISGLFKEGKGEHG 369
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + + N Y+ +ID C+ D A E EM+++ PN T+++L+ G
Sbjct: 370 MQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWG 429
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ + ++HK + + + + ++ +I+ LC+ + ++AL +M+ G+ +
Sbjct: 430 YFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLD 489
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKM--QADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
+ Y+ +I C V + ++LF +M ++ PD+ T+N L+ +FC N + +A
Sbjct: 490 VVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDI 549
Query: 418 FFSMLTLGLRPDNFSYSALIKAL 440
+ML G PD + +K L
Sbjct: 550 LNTMLDQGCDPDFITCDIFLKTL 572
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 114/474 (24%), Positives = 214/474 (45%), Gaps = 43/474 (9%)
Query: 9 STRLYNAVIDALVKSNSIDLAYLKFQQMSVD-----QCKPDRFTYNILIHGICRIGVVDE 63
+ + +N V++ +++ DLA L+F +D +P+ ++N++I +CR+G VD+
Sbjct: 135 TVKSFNTVLNVVIQEGCFDLA-LEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQ 193
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ + + M + YTY+ L+ G CN R+ E +L+ M+ PN
Sbjct: 194 AVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPV------- 246
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
AF N L+ L S A+ ++ M +G +P
Sbjct: 247 ----------AF------------------NVLISALCKKGDLSRASKLVDNMFLKGCVP 278
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ V L L++ +L+ + P T+ L++ K GR ++G R L
Sbjct: 279 NEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVL 338
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + N SY+ +I K + ++ +EM ++ PN + ++ LI G C++
Sbjct: 339 VSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCRE 398
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + +E L+ + G P+ FT++S++ A A+ EM + + + Y
Sbjct: 399 GKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCY 458
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+ILI LC G + +L ++++M + I D+ ++++I FC +E+ K F ML
Sbjct: 459 SILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLC 518
Query: 424 LG--LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
L+PD +Y+ L+ A A +M GC+PD T ++ L+TL
Sbjct: 519 HNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL 572
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 133/265 (50%), Gaps = 4/265 (1%)
Query: 241 RYLNHVFKDRLVSNVN----SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
+ NHV SN+ S+N+VI C+V +D+A E+ R M DR+ + T++TL
Sbjct: 157 EFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTL 216
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ G C + + + LL + G P+ FN +I LC+ A + M G
Sbjct: 217 MHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGC 276
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
PN +TYN L+ LC G + +++ L +M A++ P+ TF L+ F + + +
Sbjct: 277 VPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVR 336
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
S+ G R + FSYS+LI L K G+ + Q + M + GC P++ + +++ L
Sbjct: 337 VLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLC 396
Query: 477 QQGRFEEAHDIVKTSKERGISFKSF 501
++G+ +EA + + K +G + SF
Sbjct: 397 REGKPDEAKEYLIEMKNKGHTPNSF 421
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/491 (21%), Positives = 209/491 (42%), Gaps = 46/491 (9%)
Query: 12 LYNAVIDALVKSNSIDLAYLKFQQMSVD-QCKPDRFTYNILIHGICRIGVVDEAL----R 66
++ A A + ++DL F +M + CK ++N +++ + + G D AL
Sbjct: 106 MFKAYGKAHLPQKALDL----FHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNH 161
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++ PN ++ ++I C V + V M +RN + T +L+HG
Sbjct: 162 VIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHG-- 219
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
L N EA ++L +M G P
Sbjct: 220 ---------------------------------LCNEGRIDEAVSLLDEMQVEGTFPNPV 246
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
F+ ++ L DL+ ++D +G P TY L+ L G+ + LN +
Sbjct: 247 AFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRM 306
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
++ V N ++ ++D F K + + ++ N ++++LISG K+ +
Sbjct: 307 VANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKG 366
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+L ++E G KP+ ++++ID LCR + ++A + L EM G PN+ TY+ L
Sbjct: 367 EHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSL 426
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ GD+ +++ ++++M + + ++ LI C+ K+++A + ML+ G+
Sbjct: 427 MWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGI 486
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSM--EQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ D +YS++I + ++ + F M PD T N++L + A
Sbjct: 487 KLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRA 546
Query: 485 HDIVKTSKERG 495
DI+ T ++G
Sbjct: 547 IDILNTMLDQG 557
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 178/422 (42%), Gaps = 5/422 (1%)
Query: 82 TYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRF 141
++ LI+ F N+ + ++L MK N E + + + P KA +L R
Sbjct: 67 SFYSLIENFSNSLDFTSLEQLLHQMKCENRVFIEKSFIIMFKAYGKAHLPQKALDLFHRM 126
Query: 142 MEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL----PESSTFDYTVTCLV 196
Q + NT+L + A + D P +F+ + L
Sbjct: 127 GAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALC 186
Query: 197 TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVN 256
++++ + R TY LM L GR E L+ + + N
Sbjct: 187 RVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPV 246
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
++N++I CK + RA+++ M + PN VT+N+L+ G C ++ K LL +
Sbjct: 247 AFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRM 306
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
+ P+ TF +++D + R D + L + E G N +Y+ LI L G
Sbjct: 307 VANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKG 366
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
++L+++M P+ ++ALI CR K ++A++ M G P++F+YS+L
Sbjct: 367 EHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSL 426
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ ++G +A + M N CN ++++ L + G+ +EA + K RGI
Sbjct: 427 MWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGI 486
Query: 497 SF 498
Sbjct: 487 KL 488
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 16/194 (8%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM- 71
Y+ +I+ L K+ + A + ++QM K D Y+ +IHG C +V++ ++L QM
Sbjct: 458 YSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQML 517
Query: 72 -EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
P+V TY IL++ FC V+ +L M ++ P+ T + + +D
Sbjct: 518 CHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMD 577
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
P P + + L+ RL A+ I+ M + LP+ ST+
Sbjct: 578 P--------------PQDGREFLDELVVRLIKRQRTVGASNIIEVMLQKFLLPKPSTWAL 623
Query: 191 TVTCLVTGLDLNET 204
V L + + +T
Sbjct: 624 AVQQLCKPMKVRKT 637
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 188/402 (46%), Gaps = 6/402 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P YNA+I ++N ID AY +M PD TYNILI +C G++D AL
Sbjct: 124 PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEF 183
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
Q+ P V TYTILI+ + E ++L+ M E N+ P+ T S++ G+ R
Sbjct: 184 KNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCR 243
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+AF+++ + + N LL L N ++ M RG T
Sbjct: 244 EGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVT 303
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ ++ + + E G+L K+G+KP Y L+ AL K GR L+ +
Sbjct: 304 YSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
D V ++ +YN ++ C CK D A I ++ + +PN ++N++ S H
Sbjct: 364 SDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTG--H 421
Query: 308 KTRELLVML--LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS--EMVEWGVPPNTITY 363
K R L ++L L+ G PD T+NS+I CLCR ++A++ L EM P+ ++Y
Sbjct: 422 KVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSY 481
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
NI++ LC + V+ ++ + M P+ T+ LI+
Sbjct: 482 NIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGI 523
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 214/452 (47%), Gaps = 5/452 (1%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
KPD LIHG+ +D+A++++ +E G+ P++ Y +I GFC A R+ ++
Sbjct: 89 KPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGH-PDLIAYNAIITGFCRANRIDSAYQ 147
Query: 102 VLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS 161
VL+ MK + P+ T L+ + A E + + +E +V T+L +
Sbjct: 148 VLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLL-KENCKPTVVTYTILIEAT 206
Query: 162 N-NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
EA +L +M + P+ T++ + + ++ I+ + +G P
Sbjct: 207 LLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDV 266
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY +L+ L G+ G ++ + +NV +Y+++I C+ ++ + ++
Sbjct: 267 ITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKD 326
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M+ + + P+ ++ LI+ CK+ V E+L +++ G PD +N+++ CLC+ R
Sbjct: 327 MKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKR 386
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
++AL ++ E G PN +YN + +L + G R+L + +M + PD T+N+
Sbjct: 387 ADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNS 446
Query: 401 LIQSFCRMNKIEKAEKAF--FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
LI CR +++A + M + +P SY+ ++ L K R +A + +M
Sbjct: 447 LISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVD 506
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
GC P+ T ++E + G +A D+ T
Sbjct: 507 KGCRPNETTYTFLIEGIGFGGCLNDARDLATT 538
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 186/415 (44%), Gaps = 19/415 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP YN +I +L +D A Q+ + CKP TY ILI G +DEA
Sbjct: 156 GFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEA 215
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+ +M + P+++TY +I G C V F+++ + + P+ T L+ G
Sbjct: 216 MKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRG 275
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +EL+ + R + + L+ + + E +L+ M +G P+
Sbjct: 276 LLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPD 335
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+D + L ++ +LD I G P Y ++ L K R E
Sbjct: 336 GYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFE 395
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + N +SYN + RA + EM D+ + P+ +T+N+LIS C+D
Sbjct: 396 KLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDG 455
Query: 305 EVHKTRELLVML----LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
V + ELLV + EC KP ++N ++ LC+ R DA++ L+ MV+ G PN
Sbjct: 456 MVDEAIELLVDMEMESSEC--KPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNE 513
Query: 361 ITYNILIRSLCAIG------DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
TY LI + G D+A +L + D IS ++F L ++FC+++
Sbjct: 514 TTYTFLIEGIGFGGCLNDARDLATTL-----VNMDAISE--HSFERLYKTFCKLD 561
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 203/442 (45%), Gaps = 3/442 (0%)
Query: 56 CRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNE 115
C+ G +E+L ++ + G+ P+V T LI G +K + + +V+ I+ E + P+
Sbjct: 68 CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHIL-ENHGHPDL 126
Query: 116 ATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRK 175
+++ G R A+++L R + + N L+ L + M A +
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
+ P T+ + + ++E +LD ++ ++P TY ++ + + G
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
+ ++ + +V +YN+++ + E+ +M R N+VT++
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSV 306
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
LIS C+D +V + LL + + G KPD + ++ +I LC+ R + A++ L M+ G
Sbjct: 307 LISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDG 366
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
P+ + YN ++ LC +L +F+K+ SP+ ++N++ + +A
Sbjct: 367 CVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRAL 426
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF--LSMEQNGCNPDSYTSNLILE 473
ML G+ PD +Y++LI L + G DEA + + ME + C P + N++L
Sbjct: 427 GMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLL 486
Query: 474 TLVQQGRFEEAHDIVKTSKERG 495
L + R +A +++ ++G
Sbjct: 487 GLCKVSRVSDAIEVLAAMVDKG 508
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 159/357 (44%), Gaps = 43/357 (12%)
Query: 183 PESSTFDYTVTCLVTGL-------DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
P++ T D+ T L+ L + NE+ L + +G KP L+ L+ + +
Sbjct: 48 PQTHTLDFKDTHLLKSLSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTS-K 106
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
++ + H+ ++ ++ +YN +I FC+ N +D A ++ M+++ +P++VT+N
Sbjct: 107 TIDKAIQVMHILENHGHPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNI 166
Query: 296 LISGHCK-----------------------------------DAEVHKTRELLVMLLECG 320
LI C + + +LL +LE
Sbjct: 167 LIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEIN 226
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
+PD FT+NS+I +CR + A +S + G P+ ITYNIL+R L G
Sbjct: 227 LQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGY 286
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
L M A ++ T++ LI S CR K+E+ M GL+PD + Y LI AL
Sbjct: 287 ELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAAL 346
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
K GR D A + M +GC PD N IL L +Q R +EA I + E G S
Sbjct: 347 CKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCS 403
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 171/346 (49%), Gaps = 1/346 (0%)
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
++C L++ L + +A ++ + + G+ P+ ++ +T ++ +LD
Sbjct: 93 VLCTKLIHGLFTSKTIDKAIQVMHILENHGH-PDLIAYNAIITGFCRANRIDSAYQVLDR 151
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
+G P TY +L+ +L G + N + K+ V +Y ++I+
Sbjct: 152 MKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGG 211
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+D A ++ EM + ++ P++ T+N++I G C++ V + +++ + G+ PD T+N
Sbjct: 212 IDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNI 271
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
++ L ++E + +S+MV G N +TY++LI S+C G V + L + M+
Sbjct: 272 LLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKG 331
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ PD Y ++ LI + C+ +++ A + M++ G PD +Y+ ++ L K R DEA
Sbjct: 332 LKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEAL 391
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
F + + GC+P++ + N + L G A ++ ++G+
Sbjct: 392 SIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGV 437
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 159/381 (41%), Gaps = 39/381 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ + P YN++I + + +D A+ +S PD TYNIL+ G+ G +
Sbjct: 225 INLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEA 284
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L+ M G NV TY++LI C +V E +L+ MK++ + P+
Sbjct: 285 GYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDG-------- 336
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
C DP L+ L A +L M G +P
Sbjct: 337 ---YCYDP------------------------LIAALCKEGRVDLAIEVLDVMISDGCVP 369
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + CL +E I + + G P S+Y + AL+ G V +
Sbjct: 370 DIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMI 429
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC--REMRDRDIAPNLVTFNTLISGHC 301
+ + + +YN +I C C+ M+D A E+ EM + P++V++N ++ G C
Sbjct: 430 LEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLC 489
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + V E+L +++ G +P++ T+ +I+ + DA D + +V
Sbjct: 490 KVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISEH- 548
Query: 362 TYNILIRSLCAIGDVARSLRL 382
++ L ++ C + DV R L L
Sbjct: 549 SFERLYKTFCKL-DVYRQLNL 568
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 203/459 (44%), Gaps = 36/459 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SPS+ +N +D L KS ++D + F + + + + D +++ I I C G V +
Sbjct: 68 GHSPSSFSFNNALDLLAKSGNLDRTWGFFTEY-LGRTQFDVYSFWITIKAFCENGNVSKG 126
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ QME +G +PNV+ YTILI+ C + + + M + + N+ +++G
Sbjct: 127 FELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMING 186
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ FEL +KM G LP
Sbjct: 187 FFKKGYKKDGFELY-----------------------------------QKMKLVGVLPN 211
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ +T L+ + D KRGV TY +L+ L + G+ + + L
Sbjct: 212 LYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLE 271
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + ++NM++D C +D+A +++ + P LVT+N LISG K
Sbjct: 272 RMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVG 331
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
EL+ + + G P K T+ +++ R+ E A + M G+ P+ TY
Sbjct: 332 NSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYG 391
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI LC G++ + +L++ M + P+ +N +I +C+ KA K M+
Sbjct: 392 VLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKN 451
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
G+ P+ SY + I+ L K G+ EAK+ M + G P
Sbjct: 452 GVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 187/378 (49%), Gaps = 17/378 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP+ +Y +I+A ++ ID A + F +M +++ Y I+I+G + G +
Sbjct: 136 MGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKD 195
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L ++M+ +G PN+YTY LI +C +++ F+V + + +R V N T L+
Sbjct: 196 GFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIG 255
Query: 124 GVFRCLDPHKAFELLIRFMER---EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
G+ R KA LL R M+R P T+ N L+ L N +A + L K+ G
Sbjct: 256 GLCRKGQVSKAEGLLER-MKRAHINPTTRTF--NMLMDGLCNTGQLDKALSYLEKLKLIG 312
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIK----RGVKPRFSTYLLLMEALYKAGRD 236
P T++ L++G ++ ++ RG+ P TY +LM ++ D
Sbjct: 313 LCPTLVTYN----ILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRS-DD 367
Query: 237 VEGDRYLNHVFKD-RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
+E + H+ K LV + ++Y ++I C M A+++ + M + + PN V +NT
Sbjct: 368 IEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNT 427
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
+I+G+CK+ +K + L +++ G P+ ++ S I LC+ + +A L EM E G
Sbjct: 428 MINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAG 487
Query: 356 V-PPNTITYNILIRSLCA 372
+ PP ++ + CA
Sbjct: 488 LKPPESLCSKVGQAKSCA 505
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 146/313 (46%), Gaps = 6/313 (1%)
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTV---TCLVTGLDLNETCGILDTFIKRGVKPR 219
N S+ +L +M G P + F YT+ C G D+++ + G+
Sbjct: 120 NGNVSKGFELLAQMETMGVSP--NVFIYTILIEACCRNG-DIDQAKVMFSRMDDLGLAAN 176
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
Y +++ +K G +G + ++ N+ +YN +I +C+ + A ++
Sbjct: 177 QYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFD 236
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
E+ R +A N VT+N LI G C+ +V K LL + P TFN ++D LC
Sbjct: 237 EISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTG 296
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ + AL L ++ G+ P +TYNILI +G+ + L ++M+ ISP T+
Sbjct: 297 QLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYT 356
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
L+ +F R + IEKA + F M +GL PD +Y LI L G EA + + SM +
Sbjct: 357 ILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEM 416
Query: 460 GCNPDSYTSNLIL 472
P+ N ++
Sbjct: 417 HLQPNDVIYNTMI 429
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/487 (22%), Positives = 204/487 (41%), Gaps = 38/487 (7%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
R +AVI+A ++S ++ + F+ M + P F++N + + + G +D
Sbjct: 39 RPRDAVINASLQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFT- 97
Query: 71 MEGLGYAP-NVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
E LG +VY++ I I FC V++ F +L M+ V PN L+ R
Sbjct: 98 -EYLGRTQFDVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNG 156
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
D +A + R + L N +Y + N +GY +
Sbjct: 157 DIDQAKVMFSRMDDL-----GLAANQYIYTIMINGFFK-----------KGYKKD----- 195
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
G +L + ++ GV P TY L+ + G+ + + + K
Sbjct: 196 --------GFELYQKMKLV------GVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKR 241
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
+ N +YN++I C+ + +A + M+ I P TFN L+ G C ++ K
Sbjct: 242 GVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKA 301
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
L L G P T+N +I + + + EM + G+ P+ +TY IL+ +
Sbjct: 302 LSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNT 361
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
D+ ++ +F M+ + PD +T+ LI C + +A K + SM+ + L+P+
Sbjct: 362 FVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPN 421
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+ Y+ +I K +A + M +NG P+ + ++ L + G+ EA ++K
Sbjct: 422 DVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLK 481
Query: 490 TSKERGI 496
E G+
Sbjct: 482 EMTEAGL 488
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 142/323 (43%), Gaps = 35/323 (10%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ +G+ P+ YN++I + + LA+ F ++S + TYNILI G+CR G
Sbjct: 203 MKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQ 262
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V +A L+++M+ P T+ +L+DG CN ++ + LE +K +CP T
Sbjct: 263 VSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNI 322
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ G ++ N+S+ SE ++R+M DRG
Sbjct: 323 LISG--------------------------------FSKVGNSSVVSE---LVREMEDRG 347
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P T+ + V D+ + + + G+ P TY +L+ L G VE
Sbjct: 348 ISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEAS 407
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + L N YN +I+ +CK +A + EM + PN+ ++ + I
Sbjct: 408 KLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQIL 467
Query: 301 CKDAEVHKTRELLVMLLECGFKP 323
CKD + + + LL + E G KP
Sbjct: 468 CKDGKSIEAKRLLKEMTEAGLKP 490
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 117/244 (47%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+V S+ + I FC+ + + E+ +M ++PN+ + LI C++ ++ + + +
Sbjct: 106 DVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMF 165
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ + G +++ + MI+ + +D + +M GV PN TYN LI C
Sbjct: 166 SRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRD 225
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G ++ + ++F ++ ++ + T+N LI CR ++ KAE M + P ++
Sbjct: 226 GKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTF 285
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ L+ L +G+ D+A ++ G P T N+++ + G ++V+ ++
Sbjct: 286 NMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMED 345
Query: 494 RGIS 497
RGIS
Sbjct: 346 RGIS 349
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 218/489 (44%), Gaps = 38/489 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS R N+++ LVK A L + QM PD FT I+++ C+ G V+ A
Sbjct: 26 GRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAIMVNAYCKAGKVERA 85
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ V++ME LG+ N +Y L+DG+ + + VL+ M E+ V N+ T+ L+ G
Sbjct: 86 VEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKG 145
Query: 125 VFRCLDPHKAFELLIRFMERE------------------------------------PLT 148
+ +A E ++R ME+E L
Sbjct: 146 YCKQCKVEEA-EKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLK 204
Query: 149 QKL-VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGI 207
L VCN+L+ N E +L M P+S ++ V ++ +
Sbjct: 205 MNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNV 264
Query: 208 LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
D +++G++P TY L++ L + G + R + + + + N Y ++D K
Sbjct: 265 CDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFK 324
Query: 268 VNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT 327
+ RA + ++ R I ++ FNT+I+G CK E+ +E + E G KPD T
Sbjct: 325 MGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGIT 384
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+ ++ D C+ E+A +M + + P+ YN LI L +++ + L +M
Sbjct: 385 YRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMD 444
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+SP++ T+ ALI +C +++KA A+F M+ G P+ S ++ +L + GR D
Sbjct: 445 TRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRID 504
Query: 448 EAKQTFLSM 456
EA M
Sbjct: 505 EANMLLQKM 513
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 132/570 (23%), Positives = 222/570 (38%), Gaps = 78/570 (13%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ + + N++I+ K+ + M KPD ++Y L+ G CR G+ +
Sbjct: 201 VGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSK 260
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + QM G P V TY L+ G C + R+ +M +R V PNE +L+
Sbjct: 261 AFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLD 320
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+F+ D +A L + R NT++ L A ++M + G P
Sbjct: 321 GLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKP 380
Query: 184 ESSTF-----------------------------------DYTVTCLVTGLDLNETCGIL 208
+ T+ + + L T +++ +L
Sbjct: 381 DGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLL 440
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGR-DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCK 267
RG+ P TY L+ GR D Y + K NV + ++ +
Sbjct: 441 AEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKG-FAPNVIICSKIVSSLYR 499
Query: 268 VNMMDRATEICREMRDRDIA-----------------------------------PNLVT 292
+ +D A + ++M D D+ PN V
Sbjct: 500 LGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVV 559
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
+N ++G CK +V+ R + L F PD FT+ ++I A +A + EMV
Sbjct: 560 YNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMV 619
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
G+ PN TYN L+ LC G + R+ RLF K+ + P++ T+N LI +C+
Sbjct: 620 NKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPR 679
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
+A ML G+ P +YS+LI K +EA + M+ + + T + ++
Sbjct: 680 EALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLV 739
Query: 473 ETLVQQGRFEEAHDIVKTSKERGISFKSFP 502
E +Q G D+ K SK + + P
Sbjct: 740 EGCIQHG------DVKKMSKLHNMMHMACP 763
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 182/390 (46%), Gaps = 1/390 (0%)
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNT 155
V V + M + P+ + SL+ + + + + A + + + + C
Sbjct: 12 VKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAI 71
Query: 156 LLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRG 215
++ A +R+M G+ + +++ V V+ D+ G+L ++G
Sbjct: 72 MVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKG 131
Query: 216 VKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK-DRLVSNVNSYNMVIDCFCKVNMMDRA 274
V T LL++ K + E ++ L + K D +V + +Y +ID +CKV M A
Sbjct: 132 VMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDA 191
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ EM + NL N+LI+G+CK+ +VH+ LL+ + + KPD +++ +++D
Sbjct: 192 IRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDG 251
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
CR A + +M+ G+ P +TYN L++ LC GD +LRL+ M ++P+
Sbjct: 252 YCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPN 311
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
+ L+ +M +A + +L G+ ++++ +I L K G D AK+TF
Sbjct: 312 EVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFK 371
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
ME+ GC PD T + + + G EEA
Sbjct: 372 RMEELGCKPDGITYRTLSDGYCKVGNVEEA 401
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 209/493 (42%), Gaps = 36/493 (7%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F M KP + N L+ + + G A+ + QM L P+V+T I+++ +C
Sbjct: 19 FDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAIMVNAYCK 78
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
A +V + M++ N + SLV G D A +L E+ + K+
Sbjct: 79 AGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVT 138
Query: 153 CNTLLYRLSNNSMASEAAAILRKM-GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
L+ EA +LR+M + G + + + + + + + D
Sbjct: 139 LTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEM 198
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+K G+K L+ K G+ EG+R L + K L + SY ++D +C+ +
Sbjct: 199 LKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLS 258
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK------ 325
+A +C +M + I P +VT+NTL+ G C+ + L ++L+ G P++
Sbjct: 259 SKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTL 318
Query: 326 -----------------------------FTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ FN+MI+ LC+ + A + M E G
Sbjct: 319 LDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGC 378
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
P+ ITY L C +G+V + ++ +KM+ + I P I +N+LI KI K
Sbjct: 379 KPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLID 438
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
M T GL P+ +Y ALI GR D+A + M G P+ + I+ +L
Sbjct: 439 LLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLY 498
Query: 477 QQGRFEEAHDIVK 489
+ GR +EA+ +++
Sbjct: 499 RLGRIDEANMLLQ 511
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 150/338 (44%), Gaps = 1/338 (0%)
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
+ M A + MG G P + + ++ LV + + D + + P
Sbjct: 7 AEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDV 66
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
T +++ A KAG+ ++ + K N SYN ++D + + ++ A + +
Sbjct: 67 FTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKF 126
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL-VMLLECGFKPDKFTFNSMIDCLCRAH 339
M ++ + N VT LI G+CK +V + ++L M E G D++ + ++ID C+
Sbjct: 127 MSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVG 186
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ DA+ EM++ G+ N N LI C G V RL M+ + PD Y++
Sbjct: 187 KMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYC 246
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
L+ +CR KA ML G+ P +Y+ L+K L + G + +A + + M Q
Sbjct: 247 TLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQR 306
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G P+ +L+ L + G F A + RGI+
Sbjct: 307 GVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGIN 344
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 106/230 (46%), Gaps = 1/230 (0%)
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
M++ + + M+ A + M P+L + N+L+S K E + + +
Sbjct: 1 MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
PD FT M++ C+A + E A++ + EM + G N ++YN L+ ++GD+ +
Sbjct: 61 DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL-GLRPDNFSYSALIK 438
+ + M + + T LI+ +C+ K+E+AEK M G+ D ++Y ALI
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
K G+ +A + M + G + + N ++ + G+ E ++
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLL 230
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 5/141 (3%)
Query: 3 FLGIS-----PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICR 57
FLG+S P Y +I + ++ A+ +M P+ TYN L++G+C+
Sbjct: 580 FLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCK 639
Query: 58 IGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
G +D A RL ++ G PNV TY ILIDG+C + E + M + + P+ T
Sbjct: 640 SGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIIT 699
Query: 118 VRSLVHGVFRCLDPHKAFELL 138
SL++G + D +A +LL
Sbjct: 700 YSSLINGFCKQSDVEEAMKLL 720
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 208/494 (42%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G T YN+++ K+ A ++M + C PD TYN L+ R G +E
Sbjct: 310 GYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEG 369
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M G PN TYT +I+ + A + + MKE PN T +++
Sbjct: 370 ADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGM 429
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + ++L + NT+L N M + R+M G+ P
Sbjct: 430 LGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPN 489
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + + + + IK G P +TY L+ AL + G + +
Sbjct: 490 RDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVIL 549
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ N SY+++++C+ K +I E+ + I P+ + TL+ + K
Sbjct: 550 DMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRR 609
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + G+KPD FNSM+ + ++ A + L + E G+ P+ +TYN
Sbjct: 610 ALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYN 669
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ G+ + + + +Q PD+ ++N +I+ FCR +++A + M
Sbjct: 670 SLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTIS 729
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+RP +Y+ + G F E ++ M Q+ C P+ T ++++ + +++EA
Sbjct: 730 GIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEA 789
Query: 485 HDIVKTSKERGISF 498
D V E SF
Sbjct: 790 MDFVSNITEMDKSF 803
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/522 (21%), Positives = 232/522 (44%), Gaps = 38/522 (7%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
+L ++ L + + +A ++SV++ D + ++H RIG + A+ + ++
Sbjct: 175 QLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEK 234
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVA-EVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
M G +P + TY +++D + R ++ +L+ M+ + +E T +++ R
Sbjct: 235 MRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREG 294
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
+A + R + N+LL + SEA +IL++M P+ T++
Sbjct: 295 LLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYN 354
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
V V E +DT I++G+ P TY ++ A KAG++ + + + +
Sbjct: 355 ELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKES 414
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK- 308
V NV +YN ++ K + ++ ++ +MR APN VT+NT+++ C + +HK
Sbjct: 415 GCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLA-MCGNKGMHKY 473
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+ + CGF+P++ TFN++I R D + EM++ G P TYN L+
Sbjct: 474 VNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLN 533
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR------MNKIEKA-------- 414
+L GD + + M++ P+ +++ ++ + + + KIE+
Sbjct: 534 ALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFP 593
Query: 415 ---------------------EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
E+AF G +PD +++++ K+ +D A +
Sbjct: 594 SWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEML 653
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ ++G PD T N +++ + G + +I+K ++ G
Sbjct: 654 RLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSG 695
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 169/388 (43%), Gaps = 7/388 (1%)
Query: 114 NEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV----CNTLLYRLSNNSMASEA 169
NE LV + R L + +R ++ + + + T+L+ S A
Sbjct: 169 NEKIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERA 228
Query: 170 AAILRKMGDRGYLPESSTFDYTVTCLVT-GLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
+ KM G P T++ + G N+ G+LD G++ T ++
Sbjct: 229 ITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVIS 288
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
A + G E ++ + + V+ +YN ++ F K + A I +EM + P
Sbjct: 289 ACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPP 348
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+LVT+N L++ + + + + + ++ G P+ T+ ++I+ +A + + AL
Sbjct: 349 DLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFF 408
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
+M E G PN TYN ++ L + + + M+++ +P+ T+N ++ + C
Sbjct: 409 RQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTML-AMCGN 467
Query: 409 NKIEK-AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ K + F M + G P+ +++ALI A + G + + + M + G P T
Sbjct: 468 KGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTT 527
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERG 495
N +L L ++G +E A ++ K +G
Sbjct: 528 YNALLNALARRGDWEAAESVILDMKSKG 555
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 89/177 (50%), Gaps = 7/177 (3%)
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS---- 379
D + +++ R ++E A+ +M + G+ P +TYN++ L G + RS
Sbjct: 208 DVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVM---LDVYGKMGRSWNKI 264
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
L L +M+++ + D +T + +I + R +++A K F + + G F+Y++L++
Sbjct: 265 LGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQV 324
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
K+G + EA ME+N C PD T N ++ V+ G EE D + T +GI
Sbjct: 325 FGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGI 381
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 208/494 (42%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G T YN+++ K+ A ++M + C PD TYN L+ R G +E
Sbjct: 310 GYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEG 369
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M G PN TYT +I+ + A + + MKE PN T +++
Sbjct: 370 ADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGM 429
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + ++L + NT+L N M + R+M G+ P
Sbjct: 430 LGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPN 489
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ + + + + IK G P +TY L+ AL + G + +
Sbjct: 490 RDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVIL 549
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ N SY+++++C+ K +I E+ + I P+ + TL+ + K
Sbjct: 550 DMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRR 609
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + G+KPD FNSM+ + ++ A + L + E G+ P+ +TYN
Sbjct: 610 ALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYN 669
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ G+ + + + +Q PD+ ++N +I+ FCR +++A + M
Sbjct: 670 SLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTIS 729
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+RP +Y+ + G F E ++ M Q+ C P+ T ++++ + +++EA
Sbjct: 730 GIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEA 789
Query: 485 HDIVKTSKERGISF 498
D V E SF
Sbjct: 790 MDFVSNITEMDKSF 803
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/522 (21%), Positives = 232/522 (44%), Gaps = 38/522 (7%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
+L ++ L + + +A ++SV++ D + ++H RIG + A+ + ++
Sbjct: 175 QLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEK 234
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVA-EVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
M G +P + TY +++D + R ++ +L+ M+ + +E T +++ R
Sbjct: 235 MRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREG 294
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
+A + R + N+LL + SEA +IL++M P+ T++
Sbjct: 295 LLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYN 354
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
V V E +DT I++G+ P TY ++ A KAG++ + + + +
Sbjct: 355 ELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKES 414
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK- 308
V NV +YN ++ K + ++ ++ +MR APN VT+NT+++ C + +HK
Sbjct: 415 GCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLA-MCGNKGMHKY 473
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+ + CGF+P++ TFN++I R D + EM++ G P TYN L+
Sbjct: 474 VNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLN 533
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR------MNKIEKA-------- 414
+L GD + + M++ P+ +++ ++ + + + KIE+
Sbjct: 534 ALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFP 593
Query: 415 ---------------------EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
E+AF G +PD +++++ K+ +D A +
Sbjct: 594 SWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEML 653
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+ ++G PD T N +++ + G + +I+K ++ G
Sbjct: 654 RLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSG 695
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 169/388 (43%), Gaps = 7/388 (1%)
Query: 114 NEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV----CNTLLYRLSNNSMASEA 169
NE LV + R L + +R ++ + + + T+L+ S A
Sbjct: 169 NEKIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERA 228
Query: 170 AAILRKMGDRGYLPESSTFDYTVTCLVT-GLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
+ KM G P T++ + G N+ G+LD G++ T ++
Sbjct: 229 ITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVIS 288
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
A + G E ++ + + V+ +YN ++ F K + A I +EM + P
Sbjct: 289 ACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPP 348
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+LVT+N L++ + + + + + ++ G P+ T+ ++I+ +A + + AL
Sbjct: 349 DLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFF 408
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
+M E G PN TYN ++ L + + + M+++ +P+ T+N ++ + C
Sbjct: 409 RQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTML-AMCGN 467
Query: 409 NKIEK-AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
+ K + F M + G P+ +++ALI A + G + + + M + G P T
Sbjct: 468 KGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTT 527
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERG 495
N +L L ++G +E A ++ K +G
Sbjct: 528 YNALLNALARRGDWEAAESVILDMKSKG 555
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 89/177 (50%), Gaps = 7/177 (3%)
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS---- 379
D + +++ R ++E A+ +M + G+ P +TYN++ L G + RS
Sbjct: 208 DVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVM---LDVYGKMGRSWNKI 264
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
L L +M+++ + D +T + +I + R +++A K F + + G F+Y++L++
Sbjct: 265 LGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQV 324
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
K+G + EA ME+N C PD T N ++ V+ G EE D + T +GI
Sbjct: 325 FGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGI 381
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 216/492 (43%), Gaps = 13/492 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F G+ P T YN++ID K +D F++M C+PD TYN LI+ C+ G
Sbjct: 156 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 215
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ L ++M+G G PNV +Y+ L+D FC + + + M+ + PNE T S
Sbjct: 216 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 275
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ + + AF L ++ + L+ L + EA + KM G
Sbjct: 276 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 335
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P ++++ + V +++ +L+ RG+KP Y + L +
Sbjct: 336 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 395
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+N + + + +N Y ++D + K + EM++ DI +VTF LI G
Sbjct: 396 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 455
Query: 301 CKDAEVHKTRELLVMLL-ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK+ V K + + + G + + F +MID LC+ ++ E A +MV+ G+ P+
Sbjct: 456 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 515
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
Y L+ G+V +L L KM + D+ + +L+ N+++KA
Sbjct: 516 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 575
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEA--------KQTFLSMEQNGCNPDSYTSNLI 471
M+ G+ PD +++K + G DEA K L+ + + P+ Y+
Sbjct: 576 EMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDNDNALPNIYSD--- 632
Query: 472 LETLVQQGRFEE 483
+ LV EE
Sbjct: 633 -QNLVSSREHEE 643
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 212/468 (45%), Gaps = 11/468 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P TR N ++ K D F+ M +P FTYNI+I +C+ G V+ A L
Sbjct: 93 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 152
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++M+ G P+ TY +IDGF R+ + E MK+ P+ T +L++
Sbjct: 153 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALIN---- 208
Query: 128 CLDPHKAFELLIRF---MEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
C + + F M+ L +V +TL+ M +A M G +P
Sbjct: 209 CFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVP 268
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ + +L++ + + ++ GV+ TY L++ L A R E +
Sbjct: 269 NEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF 328
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ ++ N+ SYN +I F K MDRA E+ E++ R I P+L+ + T I G C
Sbjct: 329 GKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSL 388
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + ++ + ECG K + + +++D ++ + L L EM E + +T+
Sbjct: 389 EKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTF 448
Query: 364 NILIRSLCAIGDVARSLRLFQKMQAD-RISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+LI LC V++++ F ++ D + + F A+I C+ N++E A F M+
Sbjct: 449 CVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMV 508
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD--SYTS 468
GL PD +Y++L+ K G EA M + G D +YTS
Sbjct: 509 QKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 556
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 204/481 (42%), Gaps = 7/481 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P +++A+ L+ ++ A F +M + P + N L+H ++G D+ R
Sbjct: 58 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
K M G G P V+TY I+ID C V + E MK R + P+ T S++ G +
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177
Query: 128 C--LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
LD F ++ M EP + N L+ R+M G P
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEP--DVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 235
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
++ V + + + G+ P TY L++A K G + R N
Sbjct: 236 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 295
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + + NV +Y +ID C M A E+ +M + PNL ++N LI G K
Sbjct: 296 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 355
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + ELL L G KPD + + I LC + E A ++EM E G+ N++ Y
Sbjct: 356 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 415
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT-- 423
L+ + G+ L L +M+ I + TF LI C+ NK+ +F+ ++
Sbjct: 416 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK-NKLVSKAVDYFNRISND 474
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL+ + ++A+I L K + + A F M Q G PD +++ +QG E
Sbjct: 475 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 534
Query: 484 A 484
A
Sbjct: 535 A 535
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 181/414 (43%), Gaps = 21/414 (5%)
Query: 93 AKRVAEVFRVLEIMKERNVC-PNEATVRSL---------VHGVFRCLDPHKAFELLIRFM 142
+K +VF VL RNVC P +L + +C K F +
Sbjct: 39 SKADCDVFDVL--WSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVF---- 92
Query: 143 EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
P T+ CN LL+R + + + M G P T++ + C+ D+
Sbjct: 93 ---PKTRS--CNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVE 147
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
G+ + RG+ P TY +++ K GR + + + +V +YN +I
Sbjct: 148 AARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALI 207
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
+CFCK + E REM+ + PN+V+++TL+ CK+ + + + V + G
Sbjct: 208 NCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV 267
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P+++T+ S+ID C+ DA +EM++ GV N +TY LI LC + + L
Sbjct: 268 PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEEL 327
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
F KM + P++ ++NALI F + +++A + + G++PD Y I L
Sbjct: 328 FGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS 387
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ + AK M++ G +S +++ + G E ++ KE I
Sbjct: 388 LEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI 441
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 144/292 (49%), Gaps = 2/292 (0%)
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR-LVSNVNSYNMVIDCFCKVN 269
I G +P TY ++++ + K G DVE R L K R LV + +YN +ID F KV
Sbjct: 121 MIGAGARPTVFTYNIMIDCMCKEG-DVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 179
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+D EM+D P+++T+N LI+ CK ++ E + G KP+ +++
Sbjct: 180 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 239
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+++D C+ + A+ +M G+ PN TY LI + C IG+++ + RL +M
Sbjct: 240 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV 299
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+ ++ T+ ALI C ++++AE+ F M T G+ P+ SY+ALI +K+ D A
Sbjct: 300 GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRA 359
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ ++ G PD + L + E A ++ KE GI S
Sbjct: 360 LELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 411
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 117/247 (47%)
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
V ++ + + M++ A + +M+ + P + N L+ K + +
Sbjct: 57 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 116
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
++ G +P FT+N MIDC+C+ E A EM G+ P+T+TYN +I
Sbjct: 117 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 176
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
+G + ++ F++M+ PD+ T+NALI FC+ K+ + + M GL+P+
Sbjct: 177 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 236
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
SYS L+ A K G +A + ++ M + G P+ YT +++ + G +A +
Sbjct: 237 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 296
Query: 492 KERGISF 498
+ G+ +
Sbjct: 297 LQVGVEW 303
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 220/484 (45%), Gaps = 51/484 (10%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N +I + + A F +++ P T+N L+HG+C V EAL L QM
Sbjct: 18 FNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM- 76
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
PNV T+T L++G C RV E +L+ M E + PN+ T ++V G+ + D
Sbjct: 77 ---CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 133
Query: 133 KAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
A LL + E + +V + ++ L + ++A + +M D+G P+ T+
Sbjct: 134 SALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY--- 190
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+C++ G C +G+ E R L + ++
Sbjct: 191 -SCMINGF-----C--------------------------SSGKWSEAQRLLQEMLVRKI 218
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC-----KDA-E 305
+V +++ +I+ K ++ A ++ +EM + PN+VT NTL+ G C KDA E
Sbjct: 219 SPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALE 278
Query: 306 VHKTRELLVMLLEC-----GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ K + +M ++ G +PD T+N +I L +F +A + EM G+ P+T
Sbjct: 279 MFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 338
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TY+ +I LC + + ++F M + SP+I TFN LI +C+ ++ + F
Sbjct: 339 VTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCE 398
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M G+ + +Y LI+ K G + + F M +G PD+ T +L L +
Sbjct: 399 MGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEE 458
Query: 481 FEEA 484
+ A
Sbjct: 459 LKRA 462
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 196/428 (45%), Gaps = 26/428 (6%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P+ +N ++ L + + A F QM CKP+ T+ L++G+CR G V E
Sbjct: 44 LGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVE 99
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE-RNVCPNEATVRSLV 122
A+ L+ +M G PN TY ++DG C +L M+E ++ P+ +++
Sbjct: 100 AVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAII 159
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+++ A L I ++ + + ++ ++ SEA +L++M R
Sbjct: 160 DGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKIS 219
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR------- 235
P+ TF + LV DLN +L I GV P T L++ L +G+
Sbjct: 220 PDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEM 279
Query: 236 ---------DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
D++ N V D V +YN++I A E+ EM R I
Sbjct: 280 FKAMQKSMMDIDATHAFNGVEPD-----VQTYNILISGLINEGKFLEAEELYEEMPHRGI 334
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P+ VT++++I+G CK + + + ++ + F P+ TFN++I C+A +D L+
Sbjct: 335 VPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLE 394
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
EM G+ N ITY LIR +G++ SL +FQ+M + + PD T ++
Sbjct: 395 LFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLW 454
Query: 407 RMNKIEKA 414
++++A
Sbjct: 455 SKEELKRA 462
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 208/468 (44%), Gaps = 49/468 (10%)
Query: 40 QCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV 99
Q D +++NILI C + AL ++ LG+ P + T+ L+ G C RV+E
Sbjct: 10 QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69
Query: 100 FRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
+ M + PN T +L++G+ R +A LL R +E ++ T++
Sbjct: 70 LDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
+ A +LRKM + + +KP
Sbjct: 126 MCKMGDTVSALNLLRKMEELSH----------------------------------IKPD 151
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
Y +++ L+K GR + + + ++ +Y+ +I+ FC A + +
Sbjct: 152 VVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQ 211
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
EM R I+P++VTF+ LI+ K+ +++ ++LL ++ G P+ T N+++D LC +
Sbjct: 212 EMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSG 271
Query: 340 RFEDALDCLSEMVEW-----------GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
+ +DAL+ M + GV P+ TYNILI L G + L+++M
Sbjct: 272 KLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 331
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
I PD T++++I C+ +++++A + F SM + P+ +++ LI K+G D+
Sbjct: 332 RGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDD 391
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ F M + G ++ T ++ + G + DI + G+
Sbjct: 392 GLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGV 439
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 183/384 (47%), Gaps = 25/384 (6%)
Query: 5 GISPSTRLYNAVIDALVK-SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G+ P+ Y ++D + K +++ L + + KPD Y+ +I G+ + G +
Sbjct: 111 GLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTD 170
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L +M+ G P++ TY+ +I+GFC++ + +E R+L+ M R + P+ T L++
Sbjct: 171 AQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLIN 230
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + D + A +LL + + CNTLL L ++ +A + + M
Sbjct: 231 ALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM------- 283
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ S D I T GV+P TY +L+ L G+ +E +
Sbjct: 284 QKSMMD-----------------IDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELY 326
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +V + +Y+ +I+ CK + +D AT++ M + +PN+VTFNTLI+G+CK
Sbjct: 327 EEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKA 386
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V EL + G + T+ ++I + +LD EM+ GV P+TIT
Sbjct: 387 GMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITI 446
Query: 364 NILIRSLCAIGDVARSLRLFQKMQ 387
++ L + ++ R+L + +++Q
Sbjct: 447 RNMLTGLWSKEELKRALAMLEELQ 470
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 166/341 (48%), Gaps = 16/341 (4%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A + K+ G+ P TF+ + L ++E LD F + KP T+ LM
Sbjct: 34 ALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA---LDLF-HQMCKPNVVTFTTLMN 89
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD-RDIA 287
L + GR VE L+ + +D L N +Y ++D CK+ A + R+M + I
Sbjct: 90 GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIK 149
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
P++V ++ +I G KD + L + + + G PD T++ MI+ C + ++ +A
Sbjct: 150 PDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRL 209
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
L EM+ + P+ +T++ LI +L GD+ + L Q+M + + P++ T N L+ C
Sbjct: 210 LQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCD 269
Query: 408 MNKIEKAEKAFF----SMLTL-------GLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
K++ A + F SM+ + G+ PD +Y+ LI LI G+F EA++ + M
Sbjct: 270 SGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 329
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G PD+ T + ++ L +Q R +EA + + + S
Sbjct: 330 PHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFS 370
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 7/222 (3%)
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
I ++ +FN LI C +++ L + GF P TFN+++ LC R +AL
Sbjct: 11 IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
D +M + PN +T+ L+ LC G V ++ L +M D + P+ T+ ++
Sbjct: 71 DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126
Query: 406 CRMNKIEKAEKAFFSMLTLG-LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
C+M A M L ++PD YSA+I L K GR +A+ F+ M+ G PD
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGIS--FKSFPGL 504
T + ++ G++ EA +++ R IS +F GL
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGL 228
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 79/175 (45%)
Query: 2 SFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
+F G+ P + YN +I L+ A +++M PD TY+ +I+G+C+ +
Sbjct: 295 AFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRL 354
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
DEA ++ M ++PN+ T+ LI G+C A V + + M R + N T +L
Sbjct: 355 DEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITL 414
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
+ G + + + + ++ + + +L L + A A+L ++
Sbjct: 415 IRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEEL 469
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 227/486 (46%), Gaps = 39/486 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P L +I L S + A ++ ++ PD F YN +I G CR D A
Sbjct: 107 GYKPDVILCTKLIKGLFTSKRTEKA-VRVMEILEQYGDPDSFAYNAVISGFCRSDRFDAA 165
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++ +M+ G++P+V TY ILI C ++ +V++ + E N P T L+
Sbjct: 166 NRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTILIEA 225
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
H + + +R ++ E +++ L + Y + I+R M RG +
Sbjct: 226 TI----IHGSIDDAMRLLD-EMMSRGLQPDMYTYNV-----------IVRGMCKRGLVDR 269
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ F++ +LN T P + Y LL++ L GR G+R ++
Sbjct: 270 A--FEFVS-------NLNTT-------------PSLNLYNLLLKGLLNEGRWEAGERLMS 307
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ N+ +Y+++I C+ A ++ R M+++ + P+ ++ LIS CK+
Sbjct: 308 DMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEG 367
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V + ++ G+ PD +N+++ LC+ R ++AL+ ++ E G PPN +YN
Sbjct: 368 KVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYN 427
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+ +L + GD R+L + +M ++ + PD T+N+LI S CR +++A M
Sbjct: 428 TMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERT 487
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+P SY+ ++ L K+ R +A + M NGC P+ T L++E + G A
Sbjct: 488 EWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYA 547
Query: 485 HDIVKT 490
++ K+
Sbjct: 548 VELAKS 553
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 206/473 (43%), Gaps = 68/473 (14%)
Query: 55 ICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPN 114
+C+ G EAL ++QM GY P+V T LI G +KR + RV+EI+++ P+
Sbjct: 87 LCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGD-PD 145
Query: 115 EATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILR 174
+++ G R RF A ++
Sbjct: 146 SFAYNAVISGFCRS----------DRF-------------------------DAANRVIL 170
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
+M RG+ P+ T++ + L L+ ++D ++ P TY +L+EA G
Sbjct: 171 RMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHG 230
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC---------------- 278
+ R L+ + L ++ +YN+++ CK ++DRA E
Sbjct: 231 SIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLL 290
Query: 279 -------------REMRD---RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
R M D + PN+VT++ LIS C+D + + ++L ++ E G
Sbjct: 291 KGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLN 350
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
PD + ++ +I C+ + + A+ + +M+ G P+ + YN ++ SLC G +L +
Sbjct: 351 PDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNI 410
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
F+K++ P+ ++N + + +A ML+ G+ PD +Y++LI +L +
Sbjct: 411 FKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCR 470
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G DEA + ME+ P + N++L L + R +A +++ + G
Sbjct: 471 DGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNG 523
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 186/398 (46%), Gaps = 6/398 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ + G SP YN +I +L +DLA Q+ D C P TY ILI G
Sbjct: 172 MKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHGS 231
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+D+A+RL+ +M G P++YTY +++ G C KR V R E + N P+
Sbjct: 232 IDDAMRLLDEMMSRGLQPDMYTYNVIVRGMC--KR-GLVDRAFEFVSNLNTTPSLNLYNL 288
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDR 179
L+ +A E L+ M + +V + L+ L + A EA +LR M ++
Sbjct: 289 LLK-GLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEK 347
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G P++ +D ++ ++ G +D I G P Y +M +L K GR E
Sbjct: 348 GLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEA 407
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + N +SYN + RA + EM + P+ +T+N+LIS
Sbjct: 408 LNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISS 467
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
C+D V + LLV + ++P ++N ++ LC+AHR DA++ L+ MV+ G PN
Sbjct: 468 LCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPN 527
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQA-DRISPDIY 396
TY +L+ + G + ++ L + + + + IS D++
Sbjct: 528 ETTYTLLVEGVGYAGWRSYAVELAKSLVSMNAISQDLF 565
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 125/269 (46%), Gaps = 33/269 (12%)
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
CK A +M R P+++ LI G K ++ +L + G PD
Sbjct: 87 LCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYG-DPD 145
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
F +N++I CR+ RF+ A + M G P+ +TYNILI SLCA G + +L++
Sbjct: 146 SFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMD 205
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK-- 442
++ D +P + T+ LI++ I+ A + M++ GL+PD ++Y+ +++ + K
Sbjct: 206 QLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRG 265
Query: 443 ------------------------------SGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
GR++ ++ M GC P+ T ++++
Sbjct: 266 LVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLI 325
Query: 473 ETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+L + G+ EA D+++ KE+G++ ++
Sbjct: 326 SSLCRDGKAGEAVDVLRVMKEKGLNPDAY 354
>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
Length = 826
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 221/478 (46%), Gaps = 2/478 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P NA+++AL++ +++A +++M D ++ I++ G+C+ V+E +L
Sbjct: 168 PDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKL 227
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ G G PN+ Y L+DG+ V + + +K + P T +++G+ +
Sbjct: 228 INDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCK 287
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ LL+ ER V N+++ + E LR + + G P+ +T
Sbjct: 288 KCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITT 347
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG-DRYLNHV 246
++ ++ ++E +L+ IKRG+ P +Y L+ K G+ + D ++
Sbjct: 348 YNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMT 407
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
K + V +Y ++ +D A + +M +R + P+ +N L++G CK +
Sbjct: 408 EKGHPLDLV-AYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRL 466
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ LLV +L D F +++D R + ++A + G+ P + YN +
Sbjct: 467 SAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAM 526
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I+ C G + +L Q+M+ SPD +T++ +I + + N + A K F M+
Sbjct: 527 IKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKC 586
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+P+ +Y++LI ++G A++TF M +G P+ T +++ ++G+ +A
Sbjct: 587 KPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKA 644
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 199/436 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN ++D K ++ A F+++ + P TY I+I+G+C+
Sbjct: 235 GCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAV 294
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ +M+ G NV Y ++D EV + L + E P+ T +L+ G
Sbjct: 295 DGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISG 354
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R H+A ELL ++R KL L++ A + M ++G+ +
Sbjct: 355 SCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLD 414
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ V LV +++ + D ++RGV P + Y +LM L K GR L
Sbjct: 415 LVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLV 474
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L + ++D F + +D A ++ + + P +V +N +I G+CK
Sbjct: 475 EMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFG 534
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + + + PD+FT++++ID + + +AL +MV+ PN +TY
Sbjct: 535 MMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYT 594
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI C GD +R+ + F++M++ + P++ T+ LI FC+ KI KA F ML
Sbjct: 595 SLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLN 654
Query: 425 GLRPDNFSYSALIKAL 440
P++ +++ LI L
Sbjct: 655 RCIPNDVTFNYLINGL 670
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 124/498 (24%), Positives = 199/498 (39%), Gaps = 84/498 (16%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ + ++YN+++DA +K + ++ + C+PD TYN LI G CR G V EA
Sbjct: 305 GVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEA 364
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L++ G +PN +YT LI +C + F + M E+ + +LVHG
Sbjct: 365 EELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHG 424
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A + + +ER L V N L+ L S A +L +M L +
Sbjct: 425 LVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEM-----LHQ 479
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + D V+ ++D FI+ G + L E G D
Sbjct: 480 NLSLDAFVSAT-----------LVDGFIRHG---KLDEAKKLFELTIAKGMD-------- 517
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
V YN +I +CK MM+ A + M+D D +P+ T++T+I G+ K
Sbjct: 518 --------PGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQN 569
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++H +L +++ KP+ T+ S+I+ CR A EM G+ PN +TY
Sbjct: 570 DLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYT 629
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF------------------- 405
ILI C G ++++ F+ M +R P+ TFN LI
Sbjct: 630 ILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIK 689
Query: 406 ------------------------------CRMNKIEKAEKAFFSMLTLGLRPDNFSYSA 435
C + A + M G+ PD S++A
Sbjct: 690 ASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAA 749
Query: 436 LIKALIKSGRFDEAKQTF 453
L+ L GR E K T
Sbjct: 750 LVYGLCLEGRSKEWKNTI 767
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 201/453 (44%), Gaps = 1/453 (0%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGL-GYAPNVYTYTILIDGFC 91
+ M P R + ++ G+V+ AL L + Y P+V L++
Sbjct: 122 LETMKCKDLAPTREALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNALI 181
Query: 92 NAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL 151
K+V +V E M +R+ C + +V +V G+ + + +L+ + + +
Sbjct: 182 QQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIV 241
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
NTL+ A + +++ +G+LP + T+ + L + G+L
Sbjct: 242 FYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEM 301
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
+RGV Y +++A K G +E + L + ++ ++ +YN +I C+ +
Sbjct: 302 KERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKV 361
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
A E+ R ++PN +++ LI +CK + + +L + + E G D + ++
Sbjct: 362 HEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGAL 421
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
+ L A + AL +MVE GV P+ YN+L+ LC G ++ + L +M +
Sbjct: 422 VHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNL 481
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
S D + L+ F R K+++A+K F + G+ P Y+A+IK K G ++A
Sbjct: 482 SLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALT 541
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
M+ +PD +T + I++ V+Q A
Sbjct: 542 CVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNA 574
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 200/458 (43%), Gaps = 41/458 (8%)
Query: 73 GLG-----YAPNVYTYTILIDGF-CNA--------KRVAEVFRVLEIMKERNVCPNEATV 118
GLG +A + L+DGF C++ + EV +LE MK +++ P +
Sbjct: 78 GLGLKLFEWASKRSDFNDLLDGFSCSSLLKLLARCRVFVEVENLLETMKCKDLAPTREAL 137
Query: 119 RSLVHGVFRCLDPHKAFELL-IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
+V ++A EL I + L + CN LL N + + I RK+
Sbjct: 138 SFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALL----NALIQQKKVEIARKVY 193
Query: 178 DRGYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
+ + +Y+V +V GL + E +++ +G P Y L++ +K
Sbjct: 194 EEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKR 253
Query: 234 GRDVEGDRYLNHVFKD----RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
G DVE N +FK+ + +Y ++I+ CK + EM++R + N
Sbjct: 254 G-DVE---RANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVN 309
Query: 290 LVTFNTLISGHCKDA---EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
+ +N+++ K EV KT L + E G +PD T+N++I CR + +A +
Sbjct: 310 VQVYNSIVDAQIKHGCKIEVGKT---LRWITENGCEPDITTYNTLISGSCRDGKVHEAEE 366
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L ++ G+ PN ++Y LI C G R+ LF M D+ + AL+
Sbjct: 367 LLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLV 426
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+++ A M+ G+ PD Y+ L+ L K GR AK + M + D++
Sbjct: 427 AAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAF 486
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFPGL 504
S +++ ++ G+ +EA + + + +G+ PG+
Sbjct: 487 VSATLVDGFIRHGKLDEAKKLFELTIAKGMD----PGV 520
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 159/406 (39%), Gaps = 62/406 (15%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP+ Y +I K A+ F M+ D Y L+HG+ G VD A
Sbjct: 375 GLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVA 434
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + +M G P+ Y +L++G C R++ +L M +N+ + +LV G
Sbjct: 435 LTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDG 494
Query: 125 VFRC--LD-PHKAFELLI-RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
R LD K FEL I + M+ + N ++ M ++A +++M D
Sbjct: 495 FIRHGKLDEAKKLFELTIAKGMDPGVVGY----NAMIKGYCKFGMMNDALTCVQRMKDGD 550
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ P+ T+ + V DL+ + +K+ KP TY L+ + G +
Sbjct: 551 HSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAE 610
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG- 299
+ + L NV +Y ++I CFCK + +A M PN VTFN LI+G
Sbjct: 611 KTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGL 670
Query: 300 --HCKDAEVHKTRELL----------------------------VMLLEC---------- 319
+ A +K E L V++ C
Sbjct: 671 TNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQ 730
Query: 320 --------GFKPDKFTFNSMIDCLC---RAHRFEDALDCLSEMVEW 354
G PD +F +++ LC R+ +++ + C ++ EW
Sbjct: 731 LRDKMTGKGIFPDPVSFAALVYGLCLEGRSKEWKNTISC--KLNEW 774
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 209/473 (44%), Gaps = 55/473 (11%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G++ T LYN +++ LV N + L M KPD T+NILI +C+ +
Sbjct: 152 FGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRP 211
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ ++++M G P+ T+T L+ GF + FRV E M + TV LVH
Sbjct: 212 AILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVH 271
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G F + + + L + + +SN + A + +M ++G P
Sbjct: 272 G----------------FCKEGRIEEAL---SFIDEMSNEGKHTMAIELYNEMKNKGCQP 312
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + L L E G+L R++E
Sbjct: 313 DEFTYNMLIDSLCYRGKLQEALGLL--------------------------REME----- 341
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
NV +YN +ID FCK ++ A EI +M + ++ N VT+NTLI G CK
Sbjct: 342 ----ISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKS 397
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V + +L+ ++ G KPDKFT+NSM+ CR + A D + M G P+ +TY
Sbjct: 398 RRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTY 457
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI LC G V + RL + +Q + + +N +IQ+ + + ++A + F M
Sbjct: 458 GTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEE 517
Query: 424 LGLRPDNFSYSALIKALIKSGR-FDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G PD F+Y + + L SG EA + M + G P+ + ++ E L
Sbjct: 518 KGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGL 570
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 125/514 (24%), Positives = 222/514 (43%), Gaps = 55/514 (10%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P++ +Y ++ L K S + Q+M C+ DR I I + + +E L +
Sbjct: 85 PNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEILCI 144
Query: 68 VKQME-GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
V+ ME G A + Y L++ + ++ V V M + + P+ +T
Sbjct: 145 VEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVST--------- 195
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
F +LI K +C R A ++ +M G +P+
Sbjct: 196 --------FNILI----------KALCKAHQIR--------PAILVMEEMSSYGLVPDEK 229
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN-- 244
TF + + +++ + + + G T +L+ K GR E +++
Sbjct: 230 TFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEM 289
Query: 245 -----HVFKDRLVSNVN---------SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
H L + + +YNM+ID C + A + REM A N+
Sbjct: 290 SNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNV 349
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
+T+NTLI G CK+ ++ + E+ + G + T+N++ID LC++ R ++A + +
Sbjct: 350 ITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQ 409
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M+ G+ P+ TYN ++ C GD+ ++ + Q M ++ PDI T+ LI C+ +
Sbjct: 410 MIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGR 469
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+E A + S+ G+ +Y+ +I+AL K R EA + F ME+ G PD++T +
Sbjct: 470 VEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKI 529
Query: 471 ILETLVQQGR-FEEAHDIVKTSKERGI--SFKSF 501
+ L G EA D V E+G F SF
Sbjct: 530 VFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSF 563
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 166/370 (44%), Gaps = 20/370 (5%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P + + ++ ++ ++D A+ +QM C T N+L+HG C+ G
Sbjct: 219 MSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGR 278
Query: 61 VDEAL----------------RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLE 104
++EAL L +M+ G P+ +TY +LID C ++ E +L
Sbjct: 279 IEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLR 338
Query: 105 IMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNN 163
M+ N T +L+ G + +A E+ + ME + L++ V NTL+ L +
Sbjct: 339 EMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQ-MEIQGLSRNSVTYNTLIDGLCKS 397
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
EAA ++ +M G P+ T++ +T D+ + I+ T G +P TY
Sbjct: 398 RRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTY 457
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
L+ L KAGR R L + +V ++YN VI K A + REM +
Sbjct: 458 GTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEE 517
Query: 284 RDIAPNLVTFNTLISGHCKD-AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+ P+ T+ + G + + + ++ ++E GF P+ +F + + LC + E
Sbjct: 518 KGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLC-SLSME 576
Query: 343 DALDCLSEMV 352
D L L ++V
Sbjct: 577 DTLIKLVDLV 586
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/485 (24%), Positives = 211/485 (43%), Gaps = 10/485 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P ++ Y++ I A + + A M+ PD TY+ I ++ EA
Sbjct: 181 GVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAIAACAKVSRWKEA 240
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L++ M+G G PNV Y+ I + +L+ M + P+ T +++
Sbjct: 241 VGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDA 300
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA-----SEAAAILRKMGDR 179
+ AF LL+ E T+ +V N + Y + + A EA A+LR+M +
Sbjct: 301 CAKRGQWEPAFRLLM-----EMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQEN 355
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G P+ T+ T++ E G+L GV P +Y +++ A K GR E
Sbjct: 356 GVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREA 415
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L + + +V +Y+ ID + + ++A + REM + PN++++N+ I
Sbjct: 416 IDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDA 475
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
K ELL + G PD T++++I ++E+ALD EM G+ P+
Sbjct: 476 CAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPD 535
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
++ N I + G +L + +M + PD ++ I + + ++ ++
Sbjct: 536 VVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLR 595
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M T+GL PD SY + A G + EA M G +PD T N + + G
Sbjct: 596 EMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGG 655
Query: 480 RFEEA 484
R++EA
Sbjct: 656 RWKEA 660
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 122/495 (24%), Positives = 211/495 (42%), Gaps = 4/495 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y++ I A K + A + M KP+ Y+ I + G + A
Sbjct: 216 GTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETA 275
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+K+M +G AP+V TY+ +ID + FR+L M + V N T ++
Sbjct: 276 VDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGA 335
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A LL E + ++ + + EA +LR+M G P
Sbjct: 336 CAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPN 395
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ ++ E +L GV P Y ++A +A R + L
Sbjct: 396 AISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLR 455
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L NV SYN ID K A E+ REM +AP+++T++ +I+
Sbjct: 456 EMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGR 515
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + +L + G PD + N+ I+ + +E+ALD L EM G+ P+ I+Y
Sbjct: 516 QWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYR 575
Query: 365 ILIRSLCAIGDVARSL-RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF-SML 422
I + CA GD + + L ++M ++PD ++ S C ++ + K ML
Sbjct: 576 TAIDA-CAKGDRWKEIIDLLREMSTVGLTPDAISYR-FAMSACSVDGLWKEALVLLRDML 633
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+GL PD +Y++ I A K GR+ EA M G PD + N ++ ++
Sbjct: 634 AVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWG 693
Query: 483 EAHDIVKTSKERGIS 497
A +++ + G+S
Sbjct: 694 TAVEVLFEMRALGVS 708
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 180/391 (46%)
Query: 98 EVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL 157
+ VL+ M+E+ V P+ S + +A ELL R L ++ +
Sbjct: 169 KALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAI 228
Query: 158 YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK 217
+ S EA +LR M +G P + ++ G +L G+
Sbjct: 229 AACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLA 288
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
P TY +++A K G+ R L + +V+N+ +Y++VI K + A +
Sbjct: 289 PDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVAL 348
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
REM++ +AP+++T+++ IS K + + LL + G P+ ++ +I +
Sbjct: 349 LREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAK 408
Query: 338 AHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
R+ +A+D L EM GVPP+ I Y+ I + ++L L ++M A ++P++ +
Sbjct: 409 RGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVIS 468
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+N+ I + + + + A + M GL PD +YSA+I + +++EA F M+
Sbjct: 469 YNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQ 528
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+ G PD + N + Q G +EEA D++
Sbjct: 529 RQGITPDVVSCNTAINACAQGGWWEEALDVL 559
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 201/464 (43%), Gaps = 2/464 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ +Y+A I A K + A ++M PD TY+ +I + G + A
Sbjct: 251 GVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPA 310
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL+ +M G N+ TY+I+I + E +L M+E V P+ T S +
Sbjct: 311 FRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISA 370
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ +A LL R M E +T + ++ + EA +L++M G P
Sbjct: 371 CAKKGQWEEAVGLL-REMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPP 429
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ + + + +L G+ P +Y ++A K GR L
Sbjct: 430 DVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELL 489
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ L +V +Y+ VI + A ++ REM+ + I P++V+ NT I+ +
Sbjct: 490 REMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQG 549
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ ++L + G PD ++ + ID + R+++ +D L EM G+ P+ I+Y
Sbjct: 550 GWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISY 609
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+ + G +L L + M A +SPD+ T+N+ I + + + ++A M T
Sbjct: 610 RFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPT 669
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
GL PD S++A I A ++ A + M G +P+ T
Sbjct: 670 FGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEAT 713
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 155/361 (42%), Gaps = 35/361 (9%)
Query: 172 ILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY 231
+L +M ++G P+S + + +L + RG P TY + A
Sbjct: 173 VLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAIAACA 232
Query: 232 KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
K R E L + + NV Y+ I K + A ++ +EM +AP+++
Sbjct: 233 KVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVI 292
Query: 292 TFNTLIS----------------------------------GHC-KDAEVHKTRELLVML 316
T++T+I G C K + + LL +
Sbjct: 293 TYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREM 352
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
E G PD T++S I + ++E+A+ L EM GV PN I+Y I+I + G
Sbjct: 353 QENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRW 412
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
++ L Q+MQA + PD+ ++A I + + ++ E+A M GL P+ SY++
Sbjct: 413 REAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSA 472
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
I A K+GR A + M +G PD T + ++ + ++EEA D+ + + +GI
Sbjct: 473 IDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGI 532
Query: 497 S 497
+
Sbjct: 533 T 533
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%)
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
GD ++L + +MQ + PD +++ I + + E+A + SM G PD +Y
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTY 224
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
S+ I A K R+ EA SM+ G P+ + + + G++E A D++K
Sbjct: 225 SSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPA 284
Query: 494 RGIS 497
G++
Sbjct: 285 VGLA 288
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S +G++P Y + A A + + M PD TYN I+ + G
Sbjct: 597 MSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGR 656
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
EA L++QM G AP+V ++ ID N + VL M+ V PNEAT +
Sbjct: 657 WKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEATYLT 716
Query: 121 LVHGVFRC 128
++ RC
Sbjct: 717 AMYACKRC 724
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/471 (24%), Positives = 207/471 (43%), Gaps = 38/471 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T N ++ L + N I+ A++ + M + K + +T+NI+I+ +C+ G + +A
Sbjct: 186 GFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKA 245
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ME G P + TY L+ G+ R+ ++ MK + P+ T
Sbjct: 246 KGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTY------ 299
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
N +L + N ASE +LR+M G +P+
Sbjct: 300 -----------------------------NPILSWMCNEGRASE---VLREMKGIGLVPD 327
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
S +++ + DL D +K+G+ P F TY L+ L+ + + +
Sbjct: 328 SVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIR 387
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +V + +YN+VI+ +C+ +A + EM I P T+ +LI C+
Sbjct: 388 EIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRN 447
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + EL ++ G KPD N+++D C + A L EM + P+ +TYN
Sbjct: 448 KTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYN 507
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+R LC G + L +M+ I PD ++N LI + + + A ML+L
Sbjct: 508 CLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSL 567
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
G P +Y+AL+K L K+ + A++ M+ G P+ + ++E +
Sbjct: 568 GFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAM 618
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 185/402 (46%), Gaps = 3/402 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I + +N +I+ L K + A M KP TYN L+ G G ++ A
Sbjct: 222 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGAR 281
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
++ +M+ G+ P++ TY ++ CN R +EV R MK + P+ + L+ G
Sbjct: 282 MIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLRE---MKGIGLVPDSVSYNILIRGC 338
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
D AF +++ + NTL++ L + A ++R++ ++G + +S
Sbjct: 339 SNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 398
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + D + + D + G+KP TY L+ L + + E D
Sbjct: 399 VTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEK 458
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
V + ++ N ++D C MDRA + +EM +I P+ VT+N L+ G C + +
Sbjct: 459 VVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGK 518
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ REL+ + G KPD ++N++I + + A EM+ G P +TYN
Sbjct: 519 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNA 578
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
L++ L D + L ++M+++ I P+ +F ++I++ +
Sbjct: 579 LLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSK 620
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 167/353 (47%), Gaps = 7/353 (1%)
Query: 145 EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNET 204
+P T+ CN +L LS + A M TF+ + L L +
Sbjct: 188 DPKTE--TCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKA 245
Query: 205 CGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR-LVSNVNSYNMVID 263
G L G+KP TY L++ GR +EG R + K + ++ +YN ++
Sbjct: 246 KGFLGIMESFGIKPTIVTYNTLVQGYSLRGR-IEGARMIISEMKSKGFQPDLQTYNPILS 304
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
C RA+E+ REM+ + P+ V++N LI G + ++ +++ G P
Sbjct: 305 WMCNEG---RASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVP 361
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
+T+N++I L ++ E A + E+ E G+ +++TYNI+I C GD ++ L
Sbjct: 362 TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALH 421
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+M D I P +T+ +LI CR NK +A++ F ++ G++PD + L+ +
Sbjct: 422 DEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAT 481
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G D A M++ +PD T N ++ L +G+FEEA +++ K RGI
Sbjct: 482 GNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI 534
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 181/452 (40%), Gaps = 44/452 (9%)
Query: 83 YTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFM 142
+ ++ +C + V E +MKE+ P T ++ + R A+
Sbjct: 159 FDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMY 218
Query: 143 EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
E + N ++ L +A L M G P T++ V +
Sbjct: 219 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIE 278
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
I+ +G +P TY ++ + GR E R + + LV + SYN++I
Sbjct: 279 GARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLREMKGI---GLVPDSVSYNILI 335
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL-------------------------- 296
++ A EM + + P T+NTL
Sbjct: 336 RGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIV 395
Query: 297 ---------ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
I+G+C+ + K L ++ G KP +FT+ S+I LCR ++ +A +
Sbjct: 396 LDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADEL 455
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
++V G+ P+ + N L+ CA G++ R+ L ++M I PD T+N L++ C
Sbjct: 456 FEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCG 515
Query: 408 MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL---SMEQNGCNPD 464
K E+A + M G++PD+ SY+ LI K G + K F+ M G NP
Sbjct: 516 EGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKG---DTKHAFIVRDEMLSLGFNPT 572
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
T N +L+ L + E A ++++ K GI
Sbjct: 573 LLTYNALLKGLSKNQDGELAEELLREMKSEGI 604
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 124/267 (46%), Gaps = 7/267 (2%)
Query: 235 RDVEGDRYLNHVFKDRLVSNVNS-YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
RD+ + L H DRL + ++ ++ +C++ M+D A E M+++ P T
Sbjct: 138 RDLFDELVLAH---DRLQTKSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETC 194
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
N ++S + + + K + +TFN MI+ LC+ + + A L M
Sbjct: 195 NHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMES 254
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
+G+ P +TYN L++ G + + + +M++ PD+ T+N ++ C +
Sbjct: 255 FGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGR--- 311
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A + M +GL PD+ SY+ LI+ +G + A M + G P YT N ++
Sbjct: 312 ASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIH 371
Query: 474 TLVQQGRFEEAHDIVKTSKERGISFKS 500
L + + E A +++ +E+GI S
Sbjct: 372 GLFMENKIEAAEILIREIREKGIVLDS 398
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 137/308 (44%), Gaps = 18/308 (5%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P + YN +I + ++ A+ +M P +TYN LIHG+ ++
Sbjct: 322 IGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEA 381
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L++++ G + TY I+I+G+C + F + + M + P + T SL++
Sbjct: 382 AEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIY 441
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ R +A EL + + + ++ NTL+ A ++L++M P
Sbjct: 442 VLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDP 501
Query: 184 ESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
+ D T CL+ GL E ++ +RG+KP +Y L+ +G +G
Sbjct: 502 D----DVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI-----SGYSKKG 552
Query: 240 DRYLNHVFKDRLVS-----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
D + +D ++S + +YN ++ K + A E+ REM+ I PN +F
Sbjct: 553 DTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFC 612
Query: 295 TLISGHCK 302
++I K
Sbjct: 613 SVIEAMSK 620
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 213/465 (45%), Gaps = 5/465 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P TR N ++ K D F+ M KP FTYNI+I + + G ++ A L
Sbjct: 96 PKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGL 155
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++M+ G P+ TY +IDG+ R+ + E MK + P+ T SL++ +
Sbjct: 156 FEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCK 215
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
K E R M++ L +V +TL+ M +A M G++P
Sbjct: 216 SGKLPKGLEFY-REMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEF 274
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ V +L++ + + ++ GV+ TY L++ L A R E ++ +
Sbjct: 275 TYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKM 334
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
++ N+ SYN +I F K MDRA E+ E++ R I P+L+ + T I G C ++
Sbjct: 335 VTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKI 394
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ ++ + E G K + + +++D ++ + L L EM E +T+ +L
Sbjct: 395 EAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVL 454
Query: 367 IRSLCAIGDVARSLRLFQKMQAD-RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
I LC V++++ F +M D + P+ + A+I C+ N+++ A F M G
Sbjct: 455 IDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEG 514
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD--SYTS 468
L PD +Y++L+ +K G EA M + G D +YTS
Sbjct: 515 LVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTS 559
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 208/473 (43%), Gaps = 9/473 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F G+ P T YN++ID K +D F++M C+PD TYN LI+ C+ G
Sbjct: 159 MKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGK 218
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ + L ++M+ G PNV +Y+ L+D FC + + + M+ PNE T S
Sbjct: 219 LPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTS 278
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
LV + + AF L +E + L+ L + EA + KM G
Sbjct: 279 LVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAG 338
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P ++++ + V +++ +L+ RG++P Y + L +
Sbjct: 339 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAK 398
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+N + ++ + +N Y ++D + K + EM++ D +VTF LI G
Sbjct: 399 VVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGL 458
Query: 301 CKDAEVHKTRELLV-MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK+ V K + M + G +P+ + +MID LC+ ++ + A +M + G+ P+
Sbjct: 459 CKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPD 518
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
Y L+ G++ +L L KM + D+ + +L+ F + N+++KA
Sbjct: 519 RTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLE 578
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEA--------KQTFLSMEQNGCNPD 464
M+ + PD ++K + G DEA K L+ + N P+
Sbjct: 579 EMIGEEILPDEVLCIGVLKKHYELGCIDEAVGLQSYLMKHQLLTSDNNNALPN 631
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/480 (26%), Positives = 202/480 (42%), Gaps = 5/480 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P +++A+ L+ ++ A F +M + P + N L+H ++G D R
Sbjct: 61 PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
K M G G P V+TY I+ID + + E MK R + P+ T S++ G +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180
Query: 128 C--LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
LD F ++ M EP + N+L+ + + R+M G P
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEP--DVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNV 238
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
++ V + + + G P TY L++A K G + R N
Sbjct: 239 VSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANE 298
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + + NV +Y +ID C M A ++ +M + PNL ++N LI G K
Sbjct: 299 MLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKN 358
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + ELL L G +PD + + I LC + E A ++EM E G+ NT+ Y
Sbjct: 359 MDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTT 418
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT-L 424
L+ + G+ L L ++MQ + TF LI C+ + KA F M
Sbjct: 419 LMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDF 478
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL+P+ Y+A+I L K + A F M Q G PD +++ ++QG EA
Sbjct: 479 GLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEA 538
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 160/341 (46%)
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
CN LL++ + + M G P T++ + C+ D+ G+ +
Sbjct: 101 CNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMK 160
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
RG+ P TY +++ K GR + + + +V +YN +I+CFCK +
Sbjct: 161 FRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLP 220
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
+ E REM+ + PN+V+++TL+ CK+ + + + V + G P++FT+ S++
Sbjct: 221 KGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLV 280
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
D C+ DA +EM+E GV N +TY LI LC + + +LF KM +
Sbjct: 281 DANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVI 340
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
P++ ++NALI F + +++A + + G++PD Y I L + + AK
Sbjct: 341 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVV 400
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
M++NG ++ +++ + G E +++ +E
Sbjct: 401 MNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQE 441
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 152/300 (50%), Gaps = 5/300 (1%)
Query: 201 LNETCGILDTF---IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR-LVSNVN 256
L +T G+ F I G KP TY ++++ ++K G D+E R L K R L+ +
Sbjct: 111 LGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEG-DIEAARGLFEEMKFRGLIPDTV 169
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+YN +ID + KV +D EM+ P+++T+N+LI+ CK ++ K E +
Sbjct: 170 TYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREM 229
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
+ G KP+ ++++++D C+ + A+ +M G PN TY L+ + C IG++
Sbjct: 230 KQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNL 289
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+ + RL +M + ++ T+ ALI C ++++AEK F M+T G+ P+ SY+AL
Sbjct: 290 SDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNAL 349
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
I +K+ D A + ++ G PD + L + E A ++ +E GI
Sbjct: 350 IHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGI 409
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 150/315 (47%)
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P FD + L+ L E + V P+ + L+ K G+ R
Sbjct: 60 VPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKR 119
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + V +YN++IDC K ++ A + EM+ R + P+ VT+N++I G+
Sbjct: 120 FFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYG 179
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K + T + +PD T+NS+I+C C++ + L+ EM + G+ PN +
Sbjct: 180 KVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVV 239
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
+Y+ L+ + C + ++++ + M+ P+ +T+ +L+ + C++ + A + M
Sbjct: 240 SYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEM 299
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
L +G+ + +Y+ALI L + R EA++ F M G P+ + N ++ V+
Sbjct: 300 LEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNM 359
Query: 482 EEAHDIVKTSKERGI 496
+ A +++ K RGI
Sbjct: 360 DRALELLNELKGRGI 374
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 118/247 (47%)
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
V ++ + + M++ AT+ +M+ + P + N L+ K + +
Sbjct: 60 VPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKR 119
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
++ G KP FT+N MIDC+ + E A EM G+ P+T+TYN +I
Sbjct: 120 FFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYG 179
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
+G + ++ F++M++ PD+ T+N+LI FC+ K+ K + + M GL+P+
Sbjct: 180 KVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVV 239
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
SYS L+ A K +A + ++ M + G P+ +T +++ + G +A +
Sbjct: 240 SYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEM 299
Query: 492 KERGISF 498
E G+ +
Sbjct: 300 LEVGVEW 306
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 213/459 (46%), Gaps = 16/459 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G + + + + +++A + A Q + C D N+++ IC G VDE
Sbjct: 138 GCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEG 197
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKR-------VAEVFRVLEI---MKERNVCPN 114
+ L++++ G P++ +Y ++ G C AKR + E+ RV E M E P+
Sbjct: 198 VELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPD 257
Query: 115 EATVRSLVHGVFRCLDPHK--AFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAA 171
+++ G+ C D H A ++L R M L +VC NT+L L + EA
Sbjct: 258 LRMYATIIDGI--CKDGHHEVANDILSR-MPSYGLKPNVVCYNTVLKGLCSAERWEEAED 314
Query: 172 ILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALY 231
+L +M + TF+ V ++ +L+ ++ G P TY ++
Sbjct: 315 LLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFC 374
Query: 232 KAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
K G E L ++ N SY +V+ C+ A E+ M + PN V
Sbjct: 375 KEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPV 434
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
TFNTLI+ CK + ELL +L G PD +++++ID L +A + E+AL+ L+ M
Sbjct: 435 TFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 494
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
+ G+ PNTI Y+ + +L G + +++F +Q + D +NA+I S C+ +
Sbjct: 495 INKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWET 554
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
++A F M++ G P+ +Y+ LI+ L G EA+
Sbjct: 555 DRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQ 593
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/486 (22%), Positives = 226/486 (46%), Gaps = 17/486 (3%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YNA+I ++ + A + V P+ +TY ++ +C G++ +AL ++ +M
Sbjct: 79 YNAMIAGYCRAGQVAAARRLAAAVPV---PPNAYTYFPIVRSLCARGLIADALTVLDEMP 135
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR--CLD 130
G A ++++ C R L+++ + + +V + C+D
Sbjct: 136 LRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVD 195
Query: 131 PHKAFELLIRF----MEREPLTQKLVCNTLLYRLSNNSMASEAAAILR------KMGDRG 180
+ ELL + E + ++ V L + + ++R +M + G
Sbjct: 196 --EGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHG 253
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ + + + IL G+KP Y +++ L A R E +
Sbjct: 254 CTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAE 313
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L +F++ + ++N+++D FC+ ++DR E+ +M + P+++T+ T+I+G
Sbjct: 314 DLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGF 373
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK+ V + LL + CG KP+ ++ ++ LCRA R+ DA + +S M++ G PN
Sbjct: 374 CKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNP 433
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+T+N LI +C G +++ L ++M + SPD+ +++ +I + K E+A +
Sbjct: 434 VTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 493
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ G+ P+ YS++ AL + GR D+ Q F S++ D+ N ++ +L ++
Sbjct: 494 MINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWE 553
Query: 481 FEEAHD 486
+ A D
Sbjct: 554 TDRAID 559
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 186/451 (41%), Gaps = 28/451 (6%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
YN +I G CR G V A RL + PN YTY ++ C +A+ VL+ M
Sbjct: 78 AYNAMIAGYCRAGQVAAARRLAAAVP---VPPNAYTYFPIVRSLCARGLIADALTVLDEM 134
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
R ++ R A L + CN ++ +
Sbjct: 135 PLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCV 194
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
E +LRK+ G P+ +++ + L + R+ L
Sbjct: 195 DEGVELLRKLPSFGCEPDIVSYNAVLKGLC-------------------MAKRWDDVEEL 235
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
M + + L+ + + ++ Y +ID CK + A +I M +
Sbjct: 236 MVEMVRV------HEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGL 289
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN+V +NT++ G C + +LL + + D TFN ++D C+ + ++
Sbjct: 290 KPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIE 349
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L +M+E G P+ ITY +I C G V ++ L + M A P+ ++ +++ C
Sbjct: 350 LLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLC 409
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
R + A++ M+ G P+ +++ LI + K G ++A + M NGC+PD
Sbjct: 410 RAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLI 469
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ + +++ L + G+ EEA +++ +GI+
Sbjct: 470 SYSTVIDGLGKAGKTEEALELLNVMINKGIT 500
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 128/301 (42%), Gaps = 35/301 (11%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N ++D ++ +D +QM C PD TY +I+G C+ G+VDEA+ L+K M
Sbjct: 331 FNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMS 390
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G PN +YTI++ G C A+R + ++ M ++ PN T
Sbjct: 391 ACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVT--------------- 435
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
F LI FM ++ +A +A +L++M G P+ ++ +
Sbjct: 436 --FNTLINFMCKK------------------GLAEQAIELLKQMLVNGCSPDLISYSTVI 475
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L E +L+ I +G+ P Y + AL + GR + + + + +
Sbjct: 476 DGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVR 535
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
S+ YN VI CK DRA + M PN T+ LI G + V + ++L
Sbjct: 536 SDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDL 595
Query: 313 L 313
L
Sbjct: 596 L 596
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 100/248 (40%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y VI+ K +D A + + MS CKP+ +Y I++ G+CR +A
Sbjct: 358 GCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDA 417
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ M G PN T+ LI+ C + +L+ M P+ + +++ G
Sbjct: 418 QELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDG 477
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A ELL + + ++ +++ LS + + + D +
Sbjct: 478 LGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSD 537
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ ++ ++ L + + + G P STY +L+ L G E L+
Sbjct: 538 AALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLS 597
Query: 245 HVFKDRLV 252
+ R V
Sbjct: 598 ELCSRRAV 605
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 4/199 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G P+T Y V+ L ++ A M C P+ T+N LI+ +C+ G+
Sbjct: 389 MSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGL 448
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
++A+ L+KQM G +P++ +Y+ +IDG A + E +L +M + + PN S
Sbjct: 449 AEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSS 508
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + R K ++ + + + N ++ L A M G
Sbjct: 509 MASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNG 568
Query: 181 YLPESSTFDYTVTCLVTGL 199
+P ST+ T L+ GL
Sbjct: 569 CMPNESTY----TILIRGL 583
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LIRSLCA G A + R + + +NA+I +CR ++ A + +
Sbjct: 50 LIRSLCAAGRTADAARALDTAGD---AAGVVAYNAMIAGYCRAGQVAAARR---LAAAVP 103
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ P+ ++Y ++++L G +A M GC ++ILE + G F A
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163
Query: 486 DIVKTSKERGISFKS 500
++ +G + S
Sbjct: 164 RALQVLHAKGCTLDS 178
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 207/461 (44%), Gaps = 3/461 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F G+ P T YN++ID K +D F++M C+PD TYN LI+ C+ G
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ L ++M+G G PNV +Y+ L+D FC + + + M+ + PNE T S
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
L+ + + AF L ++ + L+ L + EA + KM G
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P ++++ + V +++ +L+ RG+KP Y + L +
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 527
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+N + + + +N Y ++D + K + EM++ DI +VTF LI G
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Query: 301 CKDAEVHKTRELLVMLL-ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK+ V K + + + G + + F +MID LC+ ++ E A +MV+ G+ P+
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
Y L+ G+V +L L KM + D+ + +L+ N+++KA
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 707
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAK--QTFLSMEQ 458
M+ G+ PD +++K + G DEA Q++L Q
Sbjct: 708 EMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQ 748
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/496 (25%), Positives = 220/496 (44%), Gaps = 9/496 (1%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P TR N ++ K D F+ M +P FTYNI+I +C+ G V+ A
Sbjct: 223 VFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAAR 282
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L ++M+ G P+ TY +IDGF R+ + E MK+ P+ T +L++
Sbjct: 283 GLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALIN-- 340
Query: 126 FRCLDPHKAFELLIRF---MEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
C + + F M+ L +V +TL+ M +A M G
Sbjct: 341 --CFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P T+ + +L++ + + ++ GV+ TY L++ L A R E +
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE 458
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ ++ N+ SYN +I F K MDRA E+ E++ R I P+L+ + T I G C
Sbjct: 459 LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLC 518
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
++ + ++ + ECG K + + +++D ++ + L L EM E + +
Sbjct: 519 SLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVV 578
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQAD-RISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
T+ +LI LC V++++ F ++ D + + F A+I C+ N++E A F
Sbjct: 579 TFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQ 638
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ GL PD +Y++L+ K G EA M + G D ++ L +
Sbjct: 639 MVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQ 698
Query: 481 FEEAHDIVKTSKERGI 496
++A ++ GI
Sbjct: 699 LQKARSFLEEMIGEGI 714
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 208/493 (42%), Gaps = 7/493 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P +++A+ L+ ++ A F +M + P + N L+H ++G D+ R
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
K M G G P V+TY I+ID C V + E MK R + P+ T S++ G +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 128 C--LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
LD F ++ M EP + N L+ R+M G P
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEP--DVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
++ V + + + G+ P TY L++A K G + R N
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 427
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + + NV +Y +ID C M A E+ +M + PNL ++N LI G K
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + ELL L G KPD + + I LC + E A ++EM E G+ N++ Y
Sbjct: 488 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT-- 423
L+ + G+ L L +M+ I + TF LI C+ NK+ +F+ ++
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK-NKLVSKAVDYFNRISND 606
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
GL+ + ++A+I L K + + A F M Q G PD +++ +QG E
Sbjct: 607 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 666
Query: 484 AHDIVKTSKERGI 496
A + E G+
Sbjct: 667 ALALRDKMAEIGM 679
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 178/405 (43%), Gaps = 3/405 (0%)
Query: 93 AKRVAEVFRVLEIMKERNVC-PNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL 151
+K +VF VL RNVC P +L + +A + + +
Sbjct: 171 SKADCDVFDVL--WSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTR 228
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
CN LL+R + + + M G P T++ + C+ D+ G+ +
Sbjct: 229 SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM 288
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
RG+ P TY +++ K GR + + + +V +YN +I+CFCK +
Sbjct: 289 KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKL 348
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
E REM+ + PN+V+++TL+ CK+ + + + V + G P+++T+ S+
Sbjct: 349 PIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSL 408
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
ID C+ DA +EM++ GV N +TY LI LC + + LF KM +
Sbjct: 409 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 468
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
P++ ++NALI F + +++A + + G++PD Y I L + + AK
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 528
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M++ G +S +++ + G E ++ KE I
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI 573
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 144/290 (49%), Gaps = 2/290 (0%)
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR-LVSNVNSYNMVIDCFCKVNM 270
I G +P TY ++++ + K G DVE R L K R LV + +YN +ID F KV
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEG-DVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+D EM+D P+++T+N LI+ CK ++ E + G KP+ ++++
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
++D C+ + A+ +M G+ PN TY LI + C IG+++ + RL +M
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ ++ T+ ALI C ++++AE+ F M T G+ P+ SY+ALI +K+ D A
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+ ++ G PD + L + E A ++ KE GI S
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANS 542
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 117/247 (47%)
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRE 311
V ++ + + M++ A + +M+ + P + N L+ K + +
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 312 LLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLC 371
++ G +P FT+N MIDC+C+ E A EM G+ P+T+TYN +I
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 372 AIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNF 431
+G + ++ F++M+ PD+ T+NALI FC+ K+ + + M GL+P+
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
SYS L+ A K G +A + ++ M + G P+ YT +++ + G +A +
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 492 KERGISF 498
+ G+ +
Sbjct: 429 LQVGVEW 435
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 200/436 (45%), Gaps = 45/436 (10%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
T+NI++ +C G AL L++QM PN TY +I GFC RV V+ M
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMREM 173
Query: 107 KERN-VCPNEATVRSLVHG---VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
+ER + P++ T +L+ G + R D K F+ ++ E P ++ N L+
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAP--SAVMYNALI----- 226
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
GY C V LD+ + ++RG+ +T
Sbjct: 227 ----------------GGY------------CDVGKLDV--ALQYREDMVQRGIAMTVAT 256
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y LLM AL+ R + L + K+ +V +YN++I+ +CK +A E+ EM
Sbjct: 257 YNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMS 316
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
+ + VT+ +LI + +V +T L + ++ G +PD +N++I+ C E
Sbjct: 317 QKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDME 376
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
A + ++EM + +PP+ +TYN L+R C +G + + L +M I PD+ ++N LI
Sbjct: 377 RAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLI 436
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+ I+ A + M+ G P +Y+ALI+ L K + D+A+ M G
Sbjct: 437 SGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGIT 496
Query: 463 PDSYTSNLILETLVQQ 478
PD T ++E L +
Sbjct: 497 PDDSTYISLIEGLTTE 512
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 189/374 (50%), Gaps = 18/374 (4%)
Query: 42 KPDRFTYNILIHGICRIGVVDEALRLVKQM-EGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
+P+ TYN +I G C G V AL ++++M E G AP+ YTY LI G+C R+ +
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAV 203
Query: 101 RVL-EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC------ 153
+V E++ + V P+ +L+ G C +L + RE + Q+ +
Sbjct: 204 KVFDEMLTKGEVAPSAVMYNALIGGY--C----DVGKLDVALQYREDMVQRGIAMTVATY 257
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
N L++ L ++ AS+A A+L +M G+ P+ T++ + + + + + +
Sbjct: 258 NLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQ 317
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
+GV+ TY L+ + G+ E DR N K + +V YN +I+ C M+R
Sbjct: 318 KGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMER 377
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A EI EM + I P+ +T+NTL+ G C + + R L+ + + G +PD ++N++I
Sbjct: 378 AYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLIS 437
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI--GDVARSLRLFQKMQADRI 391
+DAL EM++ G P +TYN LI+ LC I GD A + L ++M A I
Sbjct: 438 GYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAEN--LMKEMVAKGI 495
Query: 392 SPDIYTFNALIQSF 405
+PD T+ +LI+
Sbjct: 496 TPDDSTYISLIEGL 509
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 170/372 (45%), Gaps = 12/372 (3%)
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
P +A ELL + P + NT++ A ++R+M +RG + Y
Sbjct: 132 PVRALELL----RQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDK---Y 184
Query: 191 TVTCLVTGL----DLNETCGILDTFIKRG-VKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T L++G + + + D + +G V P Y L+ G+ +Y
Sbjct: 185 TYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYRED 244
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + + V +YN+++ A + EM+ +P++ T+N LI+G+CK+
Sbjct: 245 MVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGN 304
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
K E+ + + G + T+ S+I R + ++ + V+ G+ P+ + YN
Sbjct: 305 EKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNA 364
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI S C GD+ R+ + +M+ RI PD T+N L++ FC + ++++A M G
Sbjct: 365 LINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRG 424
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
++PD SY+ LI G +A + M G NP T N +++ L + + ++A
Sbjct: 425 IQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAE 484
Query: 486 DIVKTSKERGIS 497
+++K +GI+
Sbjct: 485 NLMKEMVAKGIT 496
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 143/332 (43%), Gaps = 1/332 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQM-SVDQCKPDRFTYNILIHGICRIGVVDE 63
GI+P Y +I K ++ A F +M + + P YN LI G C +G +D
Sbjct: 178 GIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDV 237
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL+ + M G A V TY +L+ R ++ + VLE M++ P+ T L++
Sbjct: 238 ALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILIN 297
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + + KA E+ ++ + +L+Y S E + +G P
Sbjct: 298 GYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRP 357
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + TG D+ I+ K+ + P TY LM GR E +
Sbjct: 358 DVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLI 417
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K + ++ SYN +I + + A + EM D+ P L+T+N LI G CK
Sbjct: 418 DEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKI 477
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
+ L+ ++ G PD T+ S+I+ L
Sbjct: 478 RQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 33/179 (18%)
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKM----------------------------- 386
+P T T+NI++R LCA G R+L L ++M
Sbjct: 112 LPLCTTTFNIMLRHLCATGKPVRALELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMR 171
Query: 387 ---QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG-LRPDNFSYSALIKALIK 442
+ I+PD YT+ LI +C++ ++E A K F MLT G + P Y+ALI
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCD 231
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
G+ D A Q M Q G T NL++ L R +A+ +++ ++ G S F
Sbjct: 232 VGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVF 290
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 82/193 (42%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ + Y ++I + + F +PD YN LI+ C G ++ A
Sbjct: 319 GVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERA 378
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +ME P+ TY L+ GFC R+ E +++ M +R + P+ + +L+ G
Sbjct: 379 YEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISG 438
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
D A + M++ + N L+ L +A ++++M +G P+
Sbjct: 439 YSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPD 498
Query: 185 SSTFDYTVTCLVT 197
ST+ + L T
Sbjct: 499 DSTYISLIEGLTT 511
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 223/481 (46%), Gaps = 8/481 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ YN V+D L K+ ++ A M++ C PD +YN +HG+ + + EA R+
Sbjct: 599 PNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRI 658
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
QM+ + AP+ T ++ F + E L +KE + P RS H +
Sbjct: 659 FCQMKKV-LAPDYTTLCTILPSFVKNGLMNEA---LHTLKEYILQPGSKADRSSFHSLME 714
Query: 128 CLDPHKAFELLIRFMEREPLTQKLV----CNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ E I F E L++ L+ + L+ L + A EA +++K G
Sbjct: 715 GILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSL 774
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ +++ + LV ++ G+ + G P TY L+++A+ K+ R + +
Sbjct: 775 KTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQ 834
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ S +YN +I K M+ A ++ ++ +P T+ L+ G KD
Sbjct: 835 KEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKD 894
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ +L +L+ G KP++ +N +++ A E + MV+ G+ P+ +Y
Sbjct: 895 GKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSY 954
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+LI +LC G + SL F+++ + PD+ T+N LI R ++E+A F M
Sbjct: 955 TVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEK 1014
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ P+ ++Y++LI L K G+ EA + + + +NG P+ +T N ++ G +
Sbjct: 1015 SGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDN 1074
Query: 484 A 484
A
Sbjct: 1075 A 1075
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 222/486 (45%), Gaps = 4/486 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI PS R Y+ ++ A K + + +L ++M KP+ ++Y I I + + G +EA
Sbjct: 212 GIVPSVRTYSVLMLAFGKRDVETVVWL-LREMEDHGVKPNVYSYTICIRVLGQAGRFEEA 270
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++++ME G P+V T T+LI C+A RV++ V MK + P+ T +L+
Sbjct: 271 YKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDK 330
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYLP 183
D E+ M+ + +V T ++ L EA+ + +M +G P
Sbjct: 331 CGDNGDSRSVIEIW-NAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEP 389
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ +++ ++ + LN + + G P TY+L + K+G ++ +
Sbjct: 390 QQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRY 449
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +V +V + N V+ K + A + E++ + P+ +T+ +I K
Sbjct: 450 ELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKA 509
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + ++ ++E PD NS+ID L +A R +A E+ E + P TY
Sbjct: 510 SNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTY 569
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L+ L G V + L ++M ++ P++ T+N ++ C+ ++ A ++M
Sbjct: 570 NTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTM 629
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G PD SY+ + L+K R EA + F M++ PD T IL + V+ G E
Sbjct: 630 KGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVKNGLMNE 688
Query: 484 AHDIVK 489
A +K
Sbjct: 689 ALHTLK 694
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 211/483 (43%), Gaps = 1/483 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI ++ YN +I LVKS A ++ M+ D P TY++L+ + V +
Sbjct: 177 GIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRDV-ETV 235
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+++ME G PNVY+YTI I A R E +++L+ M++ P+ T L+
Sbjct: 236 VWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQI 295
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A ++ + + ++ TLL + +N + I M GY
Sbjct: 296 LCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDN 355
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ V L ++E + D ++G++P+ +Y L+ KA R N
Sbjct: 356 VVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFN 415
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
H+ N +Y + I+ + K +A + M+ + I P++V N ++ K
Sbjct: 416 HMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSG 475
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + L G PD T+ MI C +A ++A+ SEM+E P+ + N
Sbjct: 476 RLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVN 535
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI +L G + ++F +++ + P T+N L+ R K+++ M +
Sbjct: 536 SLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSN 595
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
P+ +Y+ ++ L K+G + A +M GC PD + N L LV++ R EA
Sbjct: 596 SYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEA 655
Query: 485 HDI 487
I
Sbjct: 656 FRI 658
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 135/563 (23%), Positives = 229/563 (40%), Gaps = 70/563 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P NAV+ +L KS + +A F ++ PD TY ++I + DEA
Sbjct: 456 GIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEA 515
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ +M P+V LID A R E +++ +KE N+ P + T +L+ G
Sbjct: 516 MKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAG 575
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R + LL + NT+L L N + A +L M +G +P+
Sbjct: 576 LGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPD 635
Query: 185 SSTFDYTVTCLVTGLDLNET------------------CGILDTFIKRGV---------- 216
S+++ + LV L E C IL +F+K G+
Sbjct: 636 LSSYNTALHGLVKEDRLTEAFRIFCQMKKVLAPDYTTLCTILPSFVKNGLMNEALHTLKE 695
Query: 217 -------KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
K S++ LME + K + + ++ R++ + + +I CK
Sbjct: 696 YILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSK 755
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
A E+ ++ ++ ++N LI G + + L + G PD+FT+N
Sbjct: 756 KALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYN 815
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++D + ++ R ED L EM G +TYN +I L + ++ L+ K+ ++
Sbjct: 816 LILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSE 875
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL------------------------- 424
SP T+ L+ + KIE AE F ML
Sbjct: 876 GFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKV 935
Query: 425 ----------GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
G+ PD SY+ LI AL +GR +++ F + + G PD T NL++
Sbjct: 936 CELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHG 995
Query: 475 LVQQGRFEEAHDIVKTSKERGIS 497
L + GR EEA + ++ GI+
Sbjct: 996 LGRSGRLEEAVSLFNDMEKSGIA 1018
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 119/534 (22%), Positives = 227/534 (42%), Gaps = 41/534 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y I L ++ + AY Q+M + CKPD T +LI +C G V +A
Sbjct: 246 GVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDA 305
Query: 65 -----------------------------------LRLVKQMEGLGYAPNVYTYTILIDG 89
+ + M+ GY NV YT ++D
Sbjct: 306 KDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDA 365
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C RV E V + MK++ + P + + SL+ G + + A EL P
Sbjct: 366 LCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPN 425
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ + + +A M +G +P+ + + L L +
Sbjct: 426 GYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFH 485
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
GV P TY ++++ KA E + + + + R V +V + N +ID K
Sbjct: 486 ELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAG 545
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
+ A +I E+++ ++ P T+NTL++G ++ +V + LL + + P+ T+N
Sbjct: 546 RGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYN 605
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+++DCLC+ AL L M G P+ +YN + L + + R+F +M+
Sbjct: 606 TVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMK-K 664
Query: 390 RISPDIYTFNALIQSFCR---MNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
++PD T ++ SF + MN+ K + +L G + D S+ +L++ ++K
Sbjct: 665 VLAPDYTTLCTILPSFVKNGLMNEALHTLKEY--ILQPGSKADRSSFHSLMEGILKRAGM 722
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+++ + ++ + D + + ++ L + + EAH++VK + G+S K+
Sbjct: 723 EKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKT 776
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 188/439 (42%), Gaps = 46/439 (10%)
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFE----LLIRFMEREPLTQK 150
RV ++ +V ++M+ + V N T + +FR L L E +
Sbjct: 127 RVRDMAQVFDLMQRQIVKANVGTFLT----IFRSLGMEGGLRSAPVALPMMKEAGIVLNS 182
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL-DLNETCGILD 209
N L+Y L + EA + + M G +P T Y+V L G D+ +L
Sbjct: 183 YTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRT--YSVLMLAFGKRDVETVVWLLR 240
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
GVKP +Y + + L +AGR E + L + + +V + ++I C
Sbjct: 241 EMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAG 300
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTL--------------------------------- 296
+ A ++ +M+ D P+ VT+ TL
Sbjct: 301 RVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYT 360
Query: 297 --ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 354
+ C+ V + ++ + + G +P ++++NS+I +A R AL+ + M
Sbjct: 361 AVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIH 420
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
G PN TY + I G+ ++++ ++ M++ I PD+ NA++ S + ++ A
Sbjct: 421 GPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMA 480
Query: 415 EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILET 474
++ F + ++G+ PDN +Y+ +IK K+ DEA + F M + C PD N +++T
Sbjct: 481 KRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDT 540
Query: 475 LVQQGRFEEAHDIVKTSKE 493
L + GR EA I KE
Sbjct: 541 LYKAGRGNEAWKIFHELKE 559
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 145/327 (44%), Gaps = 4/327 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+S T YNA+I LV N ID+A F +M C PD FTYN+++ + + +++
Sbjct: 770 LGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIED 829
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L++ K+M GY TY +I G +K + E + + P T L+
Sbjct: 830 MLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLD 889
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLL--YRLSNNSMASEAAAILRKMGDRGY 181
G+ + A +L ++ + + N LL YRL+ N+ + + + M D+G
Sbjct: 890 GLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNT--EKVCELFQNMVDQGI 947
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P+ ++ + L T LN++ + G++P TY LL+ L ++GR E
Sbjct: 948 NPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVS 1007
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
N + K + N+ +YN +I K A ++ E+ PN+ T+N LI G+
Sbjct: 1008 LFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYS 1067
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTF 328
++ G P+ T+
Sbjct: 1068 VSGSTDNAFASYGQMIVGGCPPNSSTY 1094
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 124/291 (42%), Gaps = 40/291 (13%)
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ R+V S N +++ + ++ M+ + + N+ TF T+ + +
Sbjct: 105 QPRIVHTTESCNYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLR 164
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
L M+ E G + +T+N +I L ++ +A++ M G+ P+ TY++L
Sbjct: 165 SAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVL- 223
Query: 368 RSLCAIG--DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+ A G DV + L ++M+ + P++Y++ I+ + + E+A K M G
Sbjct: 224 --MLAFGKRDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEG 281
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP---------------------- 463
+PD + + LI+ L +GR +AK F M+ + P
Sbjct: 282 CKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVI 341
Query: 464 --------DSYTSNL-----ILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
D Y N+ +++ L Q GR +EA D+ K++GI + +
Sbjct: 342 EIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQY 392
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 208/457 (45%), Gaps = 11/457 (2%)
Query: 38 VDQCKPDR--FTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR 95
V+ C P+ TY L+ G CR G++++A R+V M A + Y + LI C R
Sbjct: 119 VEACGPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGR 178
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-N 154
VA+ VL+ M R P+ T L+ + +A EL I FM E V N
Sbjct: 179 VADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALEL-IDFMRAEGCEPNNVTYN 237
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVT---GLDLNETCGILDTF 211
++ + +A +L + RG P + ++ + + +D +E ILD
Sbjct: 238 VIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADE---ILDEM 294
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
++ P +T +++ L + G + YL + K +NV +YN VI C+ +
Sbjct: 295 VRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNV 354
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
D A E+ M+ P++VT+NT++ G C EL++ + + PD TFN++
Sbjct: 355 DSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTI 414
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
I C+ A + +M E G PN+ TY+ +I L G + ++L L +M
Sbjct: 415 ISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGF 474
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
+ D + L +S + +KIE+ + + G+ P Y+ ++ L ++G+ D A
Sbjct: 475 NTD-KMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAID 533
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
M GC PD T +++E L +G +EA +++
Sbjct: 534 VLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELL 570
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 202/446 (45%), Gaps = 4/446 (0%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
PD N L+ +CR G +A R+V E G TY L+DG+C A + + RV
Sbjct: 94 PDVPLANRLVRDLCRRGRPADAARVV---EACGPEATAATYGALVDGYCRAGLLEDARRV 150
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
+ M + L+H + A +L + R + N LL
Sbjct: 151 VGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACK 210
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+A ++ M G P + T++ + + D+++ +L++ RG KP
Sbjct: 211 GRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVN 270
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y +++ R V+ D L+ + ++ N + N++I+ C+ ++ + T +M
Sbjct: 271 YNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMS 330
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
N+VT+N +ISG C+ V ELL + G KPD T+N+++ LC A R+E
Sbjct: 331 KHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWE 390
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
DA + + +M + P+ T+N +I C G + ++ +F++M +P+ T++ +I
Sbjct: 391 DAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTII 450
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
+ K+E+A + M G D Y L ++L K + +E Q ++ +G +
Sbjct: 451 GGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGIS 509
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIV 488
P + N +L L + G+ + A D++
Sbjct: 510 PQTVLYNTVLLGLCRNGKTDYAIDVL 535
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 142/275 (51%)
Query: 226 LMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
L+ AL + GR + L+ + +V +YN+++ CK +A E+ MR
Sbjct: 169 LIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEG 228
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
PN VT+N +I C++ +V + RELL L G KP+ +N+++ C R+ DA
Sbjct: 229 CEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDAD 288
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
+ L EMV PPN T N++I +LC G + + +KM + ++ T+NA+I
Sbjct: 289 EILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGM 348
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
C ++ A + +M + G +PD +Y+ ++K L + R+++A++ + M QN PD+
Sbjct: 349 CEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDN 408
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
T N I+ Q+G +A ++ K E+G + S
Sbjct: 409 STFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNS 443
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 143/289 (49%)
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+LD + RG P TY +L++A K + ++ + + N +YN++ID C
Sbjct: 185 VLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMC 244
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
+ +D+A E+ + R PN V +NT++ G C E+L ++ P++
Sbjct: 245 REGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEA 304
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T N +I+ LCR + L +M + G N +TYN +I +C G+V +L L M
Sbjct: 305 TLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNM 364
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
Q+ PDI T+N +++ C ++ E AE+ M PDN +++ +I + G
Sbjct: 365 QSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLI 424
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
+A + F M + GCNP+S T + I+ L + G+ E+A +++ +G
Sbjct: 425 LQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKG 473
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 180/401 (44%), Gaps = 36/401 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P YN ++ A K A M + C+P+ TYN++I +CR G VD+A
Sbjct: 193 GCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQA 252
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ + G PN Y ++ GFC+ +R + +L+ M N PNEAT
Sbjct: 253 RELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEAT------- 305
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
++I + R+ L QK+ LY L KM G
Sbjct: 306 ----------LNVIINTLCRKGLLQKVT----LY--------------LEKMSKHGCTAN 337
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ ++ + +++ +L G KP TY +++ L A R + + +
Sbjct: 338 VVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMI 397
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ + + +++N +I +C+ ++ +A E+ ++M ++ PN T++T+I G K
Sbjct: 398 KMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAG 457
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + ELL + GF DK + + + L + + E+ + + ++ + G+ P T+ YN
Sbjct: 458 KMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYN 516
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
++ LC G ++ + M + PD T+ LI+
Sbjct: 517 TVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGL 557
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 200/443 (45%), Gaps = 41/443 (9%)
Query: 57 RIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE---RNVCP 113
R G ++ + ++QM G V ++T ++DG C + EV R +M E + P
Sbjct: 169 RSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLC---KKGEVVRAKALMDELVCKGFKP 225
Query: 114 NEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAIL 173
+ T +L++G D E+L ME+ + + T+L + S E A L
Sbjct: 226 SVITYNTLLNGYIEIKDVGGVNEIL-SLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKL 284
Query: 174 RKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
D +K+G++P Y ++ K
Sbjct: 285 ----------------------------------FDEMLKKGIEPDVYIYTSIINWNCKF 310
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
G + + + RLV N +Y +I+ CK M A + +M+ + + N V F
Sbjct: 311 GNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIF 370
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
NTL+ G+CK + + L ++ + GF+ D FT N + CR++R E+A L M E
Sbjct: 371 NTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEE 430
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
GV PN ++++ILI C + A + RLF+ M+ +P + T+NA I+ +C+ K+E+
Sbjct: 431 RGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEE 490
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A K M GL PD ++Y++LI SG D A + F M Q G N + T +I+
Sbjct: 491 AYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIIS 550
Query: 474 TLVQQGRFEEAHDIVKTSKERGI 496
L + GR +EA + + GI
Sbjct: 551 GLSKDGRADEAFKLYDEMNKEGI 573
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 201/461 (43%), Gaps = 35/461 (7%)
Query: 19 ALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAP 78
AL +S +++L +QM + ++ ++ G+C+ G V A L+ ++ G+ P
Sbjct: 166 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 225
Query: 79 NVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELL 138
+V TY L++G+ K V V +L +M E+NV T + +L
Sbjct: 226 SVITYNTLLNGYIEIKDVGGVNEILSLM-EKNVVDYNVT----------------TYTML 268
Query: 139 IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTG 198
I + R +S EA + +M +G P+ + +
Sbjct: 269 IEWYSR------------------SSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKF 310
Query: 199 LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY 258
++ + D +R + P TY L+ KAG + +N + + N +
Sbjct: 311 GNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIF 370
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
N ++D +CK M+D A + M+ + + T N + SG C+ + + LL+ + E
Sbjct: 371 NTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEE 430
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
G P+ +F+ +ID C+ F +A M + G P+ +TYN I C G +
Sbjct: 431 RGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEE 490
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+ +L +MQ + PD YT+ +LI +++A + F M LGL + +Y+ +I
Sbjct: 491 AYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIIS 550
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
L K GR DEA + + M + G PD + ++ +L + G
Sbjct: 551 GLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 591
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 182/408 (44%), Gaps = 37/408 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS YN +++ ++ + M + + TY +LI R ++EA
Sbjct: 222 GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEA 281
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L +M G P+VY YT +I+ C + F + + M ER + PN T +L++G
Sbjct: 282 EKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALING 341
Query: 125 VFRCLDPHKAFELLIRFMEREPL-TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + KA E+++ M+ + + +++ NTL+ M EA + M +G+
Sbjct: 342 ACKAGE-MKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEI 400
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ T + + E +L T +RGV P
Sbjct: 401 DAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAP------------------------- 435
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
NV S++++ID +CK A + + M + AP++VT+N I +CK
Sbjct: 436 ----------NVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKK 485
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + +L+ + E G PD +T+ S+ID + + AL+ +EM + G+ N +TY
Sbjct: 486 GKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTY 545
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
++I L G + +L+ +M + I PD +++LI S ++ +
Sbjct: 546 TVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 593
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 194/456 (42%), Gaps = 55/456 (12%)
Query: 78 PNVYTYTILIDGFCNAKRVAEVFRVLE-IMKERNVCPNEATVRSLVHGVFRCLDPHKAFE 136
P++ + IL A++ AE+ VL+ I+ + N+ N + S + G F
Sbjct: 66 PDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSIGGEFN--------- 116
Query: 137 LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY-LPESSTFDYTVTCL 195
EP + C+ L +N M + + +G+ + E S F++ +
Sbjct: 117 --------EPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALK 168
Query: 196 VTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNV 255
+G ++ L + G++ R ++ +++ L K G V ++ + +V
Sbjct: 169 RSG-NMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSV 227
Query: 256 NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
+YN +++ + ++ + EI M + N+ T+ LI + + +++ + +L
Sbjct: 228 ITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDE 287
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG- 374
+L+ G +PD + + S+I+ C+ + A EM E + PN TY LI C G
Sbjct: 288 MLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGE 347
Query: 375 ----------------DVAR------------------SLRLFQKMQADRISPDIYTFNA 400
DV R +LRL MQ D +T N
Sbjct: 348 MKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNI 407
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
+ FCR N+ E+A++ +M G+ P+ S+S LI K F EA++ F ME+ G
Sbjct: 408 IASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKG 467
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
P T N +E ++G+ EEA+ ++ +ERG+
Sbjct: 468 KAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGL 503
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 145/349 (41%), Gaps = 35/349 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +Y ++I+ K ++ A++ F +M+ + P+ +TY LI+G C+ G + A
Sbjct: 292 GIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAA 351
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+V M+ G N + L+DG+C + E R+ IM++
Sbjct: 352 EMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQ---------------- 395
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
K FE+ CN + ++ EA +L M +RG P
Sbjct: 396 --------KGFEI-----------DAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPN 436
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+F + + E + K+G P TY +E K G+ E + +N
Sbjct: 437 VVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLIN 496
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L+ + +Y +ID +DRA E+ EM + N+VT+ +ISG KD
Sbjct: 497 EMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDG 556
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
+ +L + + G PD ++S+I L + L+ + + +E
Sbjct: 557 RADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLENVVDRIE 605
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 107/231 (46%)
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
M+ E R+M D I + ++ ++ G CK EV + + L+ L+ GFKP T+N+
Sbjct: 173 MELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNT 232
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+++ + LS M + V N TY +LI + + +LF +M
Sbjct: 233 LLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKG 292
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
I PD+Y + ++I C+ +++A F M L P+ ++Y ALI K+G A+
Sbjct: 293 IEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAE 352
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
M+ G + + N +++ ++G +EA + +++G +F
Sbjct: 353 MMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAF 403
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 159/364 (43%), Gaps = 28/364 (7%)
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESS---TFDYTVTCLVTGLDLN---ETCGILDTFIK 213
+S ++A+ A ++ K G + + S FD V LV D N +C F++
Sbjct: 1 MSKQAIAANIAKLILKSGLQPFKTTPSLLSNFDSRVMQLVLS-DPNLPTRSCLRFFDFLR 59
Query: 214 RGV--KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD--------RLVSNVNS-YN--M 260
+ KP +L+L LY+A + E L + D R+VS++ +N
Sbjct: 60 QNPSRKPDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPS 119
Query: 261 VIDCFCKV--------NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+++ FC + M D + E+ R + + + + + + E
Sbjct: 120 IVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEF 179
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L +++ G + ++ +++D LC+ A + E+V G P+ ITYN L+
Sbjct: 180 LRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIE 239
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
I DV + M+ + + ++ T+ LI+ + R +KIE+AEK F ML G+ PD +
Sbjct: 240 IKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYI 299
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
Y+++I K G A F M + P++YT ++ + G + A +V +
Sbjct: 300 YTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQ 359
Query: 493 ERGI 496
+G+
Sbjct: 360 SKGV 363
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 195/407 (47%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F GI+ + + +I+ + L++ F + +PD T LI G+C G
Sbjct: 95 MEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGD 154
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ +AL ++ LG+ N +Y LI+G C + +L + + V + +
Sbjct: 155 IHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNT 214
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ GV + + AF+ + + + NTL+ L +A +L KM
Sbjct: 215 IIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILEN 274
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P TF V + E + +K+ VKP TY LM + +
Sbjct: 275 INPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAE 334
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
N + + + +V+SY+++I FCK+ M+D A ++ EM + I P++VT+N+LI G
Sbjct: 335 SIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGL 394
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK + +L+ + + G P+ T+NS++D LC+ H + A++ L+++ + + P+
Sbjct: 395 CKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSV 454
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR 407
TYNILI LC G + + ++F+ + + + D+YT+N +I+ FC+
Sbjct: 455 CTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCK 501
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 216/473 (45%), Gaps = 35/473 (7%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+PS + ++ +LVK+N + +QM + + T +ILI+ ++G +
Sbjct: 66 TPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFS 125
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+ + GY P+ T T LI G C + + + + N+ + R+L++G+
Sbjct: 126 VFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLC 185
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A E+L R + ++ NT++ + + + ++A +M + P
Sbjct: 186 KVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVV 245
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + L L + G+L I + P
Sbjct: 246 TYNTLICGLCIMGQLKDAIGLLHKMILENINP---------------------------- 277
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
V ++++++D FCK + A + M +D+ PN+VT+N+L++G+C EV
Sbjct: 278 -------TVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEV 330
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+K + + + G PD +++ MI C+ ++A+ EM + P+ +TYN L
Sbjct: 331 NKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSL 390
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I LC G ++ +L+L +M P+I T+N+L+ + C+ + ++KA + + +
Sbjct: 391 IDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNI 450
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+P +Y+ LI L KSGR +A++ F + NG N D YT N +++ ++G
Sbjct: 451 QPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 183/368 (49%), Gaps = 17/368 (4%)
Query: 138 LIRFMEREPLTQKLVCNTLLY----RLSNNSMA-SEAAAILRKMGDRGYLPESSTFDYTV 192
L R ME + LV ++L +L +NS++ S + IL+K GY P++ T+
Sbjct: 91 LHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKK----GYEPDA----ITL 142
Query: 193 TCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
T L+ GL D+++ D + G + +Y L+ L K G+ L +
Sbjct: 143 TTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDG 202
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+ +V YN +ID CK +++ A + EM + I P +VT+NTLI G C ++
Sbjct: 203 KLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKD 262
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
LL ++ P +TF+ ++D C+ + ++A + M++ V PN +TYN L+
Sbjct: 263 AIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMN 322
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
C + +V ++ +F M ++PD+++++ +I FC++ +++A K F M + P
Sbjct: 323 GYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFP 382
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
D +Y++LI L KSGR A + M G P+ T N +L+ L + ++A +++
Sbjct: 383 DVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELL 442
Query: 489 KTSKERGI 496
K+ I
Sbjct: 443 TKLKDHNI 450
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 156/335 (46%), Gaps = 4/335 (1%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
++ +Y LI+G+C++G AL ++++++G +V Y +IDG C K V + F
Sbjct: 173 NQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFY 232
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
M + +CP T +L+ G+ A LL + + + L+
Sbjct: 233 SEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKE 292
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVT--CLVTGLDLNETCGILDTFIKRGVKPRFS 221
EA + M + P T++ + CLV ++N+ I +T + GV P
Sbjct: 293 GKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVN--EVNKAESIFNTMAQIGVAPDVH 350
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+Y +++ K E + + ++ +V +YN +ID CK + A ++ EM
Sbjct: 351 SYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEM 410
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
DR PN++T+N+L+ CK+ V K ELL L + +P T+N +I+ LC++ R
Sbjct: 411 HDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRL 470
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
+DA +++ G + TYN +I+ C G V
Sbjct: 471 KDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P F ++ L +A+ + + +M G+ N +T +ILI +G + S +
Sbjct: 67 PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
F + PD T LI+ C I KA +L LG + + SY LI L K
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
G+ A + ++ D N I++ + + +A D
Sbjct: 187 VGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFD 230
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
I PS YN +I+ L KS + A F+ + V+ D +TYN +I G C+ G V
Sbjct: 450 IQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505
>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
Length = 574
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 206/440 (46%), Gaps = 38/440 (8%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS NA++ ALV+++ +DLA F+ + PD FT+NI+I G C+ G + +A +
Sbjct: 151 PSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGDV 210
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE---RNVCPNEATVRSLVHG 124
K + G AP+V TY LIDG+C +V +++ V ++KE + P+ T L++G
Sbjct: 211 AKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLING 270
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
C +P+ + A + ++M +G
Sbjct: 271 Y--CKEPN---------------------------------ITAAIKVFQEMRQQGIPAN 295
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ V+ L + ++ +++ + G+ ST ++ K G VE + +++
Sbjct: 296 VVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVD 355
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + NV +YN ++D + ++ M A M + I+PN+ T+N LI+G
Sbjct: 356 GIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSR 415
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ LL + E G K D T+N +I LC A+ L EMVE G+ P + YN
Sbjct: 416 DWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYN 475
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I C GD + + +M+ + ++ T+N ++ FC+M K+++A ML
Sbjct: 476 TIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEK 535
Query: 425 GLRPDNFSYSALIKALIKSG 444
GL P+ +Y + +I+ G
Sbjct: 536 GLVPNRITYEIINSGMIEKG 555
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/463 (22%), Positives = 202/463 (43%), Gaps = 34/463 (7%)
Query: 19 ALVKSNSIDLAYLKFQQMSVD--QCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGY 76
AL +++ AY F D + +P F+ N L+ + R VD A R +
Sbjct: 125 ALARASQPLAAYEAFLLAGADCPRYRPSAFSVNALLAALVRADRVDLADRAFRAALRRRV 184
Query: 77 APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFE 136
+P+++T+ I+I GFC ++ + V + + V P+ AT +L+ G
Sbjct: 185 SPDLFTFNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDG------------ 232
Query: 137 LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLV 196
+ +R + + +Y + A+L++M G P+ TF+ +
Sbjct: 233 ----YCKRGQVGK-------MYHVD---------ALLKEMIQAGISPDVVTFNVLINGYC 272
Query: 197 TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVN 256
++ + ++G+ TY L+ L + G+ + + + + + L ++
Sbjct: 273 KEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACILS 332
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+ N V++ FCK MM A + R + PN++T+NTL+ G+ + ++ + +
Sbjct: 333 TMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAM 392
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
G P+ T+N +I + + L EM E GV + +TYN+LI +LC G+V
Sbjct: 393 AGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEV 452
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
++++L +M + P +N +I FC + A + M R + +Y+
Sbjct: 453 RKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVF 512
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+K K G+ DEA M + G P+ T +I ++++G
Sbjct: 513 LKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKG 555
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 168/366 (45%), Gaps = 7/366 (1%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+SP +N VI K+ + A + +S P TYN LI G C+ G V +
Sbjct: 184 VSPDLFTFNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMY 243
Query: 66 R---LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
L+K+M G +P+V T+ +LI+G+C + +V + M+++ + N T SLV
Sbjct: 244 HVDALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLV 303
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKL-VCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
G+ R + + L+ ME L L N++L M EA + + RG
Sbjct: 304 SGLCREGKVEDSIK-LVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGM 362
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P T++ V + E D +G+ P TY L+ + RD
Sbjct: 363 KPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITG-FTTSRDWRSVS 421
Query: 242 YLNHVFKDRLV-SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L K++ V ++V +YN++I C + +A ++ EM + + P V +NT+I+G
Sbjct: 422 GLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGF 481
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ + E+ + + + + + T+N + C+ + ++A L+EM+E G+ PN
Sbjct: 482 CEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNR 541
Query: 361 ITYNIL 366
ITY I+
Sbjct: 542 ITYEII 547
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 160/352 (45%), Gaps = 38/352 (10%)
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK---AGRDVEG 239
P+ TF+ ++ L + + GV P +TY L++ K G+
Sbjct: 186 PDLFTFNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHV 245
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
D L + + + +V ++N++I+ +CK + A ++ +EMR + I N+VT+N+L+SG
Sbjct: 246 DALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSG 305
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
C++ +V + +L+ + E G T NS+++ C+ +A + + + G+ PN
Sbjct: 306 LCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPN 365
Query: 360 TITYNILI---RSL--------------------------CAIGD--VARSLR----LFQ 384
ITYN L+ R L C I +R R L
Sbjct: 366 VITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLD 425
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+M+ + D+ T+N LI + C ++ KA K M+ +GL P + +Y+ +I + G
Sbjct: 426 EMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKG 485
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
A + L ME+ + T N+ L+ + G+ +EA+ ++ E+G+
Sbjct: 486 DAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGL 537
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 131/281 (46%), Gaps = 38/281 (13%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK---TRELL 313
++N+VI FCK + +A ++ + + +AP++ T+NTLI G+CK +V K LL
Sbjct: 190 TFNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALL 249
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+++ G PD TFN +I+ C+ A+ EM + G+P N +TYN L+ LC
Sbjct: 250 KEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCRE 309
Query: 374 GDVARSLRLFQKMQ----------------------------------ADR-ISPDIYTF 398
G V S++L ++M+ A R + P++ T+
Sbjct: 310 GKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITY 369
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
N L+ + R+ K+++A A +M G+ P+ +Y+ LI S + M++
Sbjct: 370 NTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKE 429
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
G D T N+++ L +G +A ++ E G+ K
Sbjct: 430 KGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPK 470
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 155/322 (48%), Gaps = 20/322 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISP +N +I+ K +I A FQ+M + TYN L+ G+CR G V+++
Sbjct: 256 GISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDS 315
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++LV++ME LG A + T +++GFC + E ++ + +R + PN T +LV G
Sbjct: 316 IKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDG 375
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKL-VCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+R L K M + ++ + N L+ + + + +L +M ++G
Sbjct: 376 -YRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKA 434
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ + L ++ + +LD ++ G++P+ Y ++ + G D +G +
Sbjct: 435 DVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKG-DAQGAHEI 493
Query: 244 N-HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ K + +NV +YN+ + FCK+ MD A + EM ++ + PN +T+ + SG
Sbjct: 494 RLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSG--- 550
Query: 303 DAEVHKTRELLVMLLECGFKPD 324
++E G+ PD
Sbjct: 551 -------------MIEKGYVPD 559
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P YN +I+ + A+ +M + + + TYN+ + C++G +DE
Sbjct: 465 VGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDE 524
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV 99
A ++ +M G PN TY I+ G V ++
Sbjct: 525 ANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPDI 560
>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 223/477 (46%), Gaps = 4/477 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G + +N + L+K N I ++ +++M + T+N+++H +C+ + EA
Sbjct: 198 GCWVTIHAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEA 257
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFC---NAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
L + ++ G PNV T+ +++DG C + ++ R +EIM ++ PN T SL
Sbjct: 258 LSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSL 317
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ G + A EL M+ + T++ S EA + +M +RG
Sbjct: 318 IDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGL 377
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
LP S ++ + L D++ + + + T +L L + G +
Sbjct: 378 LPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALK 437
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+LN V ++ L+ + S+N++I+ CK N A ++ M R + P++VTF TLI GHC
Sbjct: 438 FLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHC 497
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K+ + ++ +++ KP+ +NS+I+ LC+ + A + + G+ +TI
Sbjct: 498 KEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGLV-DTI 556
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN LI G ++ +L MQ I T+N +I+ C+ +++A++ M
Sbjct: 557 TYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMM 616
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+ G+ PDN +Y L+ + K+ +E + M G PD T I+ L+Q+
Sbjct: 617 VLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGVVPDKLTYENIVSPLLQE 673
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 106/489 (21%), Positives = 212/489 (43%), Gaps = 41/489 (8%)
Query: 14 NAVIDALVKSNSIDLAYLK----FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
+AV DALV++ + A + +++ ++ C +N + + ++ + + K
Sbjct: 168 HAVFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVYK 227
Query: 70 QMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
+M GY NV T+ +++ C ++ E V + + + PN T +V G +
Sbjct: 228 EMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMG 287
Query: 130 DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
D A +L +R ME M P S T++
Sbjct: 288 DMDLALKL-VRKME-------------------------------IMSAGSIKPNSVTYN 315
Query: 190 YTVT--CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ C + G+ + E + + +K ++P TY ++E +AG E R + +
Sbjct: 316 SLIDGFCKIGGITVAEE--LRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMV 373
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ L+ N YN ++ +D A+ + +M D+ I + T + L G C++ +
Sbjct: 374 ERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYIT 433
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ L +LE D F+ N +I+ LC+++ F A L+ M G+ P+ +T+ LI
Sbjct: 434 TALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLI 493
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
C G++ +++++ KM P++ +N++I C+ ++ A + +GL
Sbjct: 494 DGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGL- 552
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
D +Y+ LI G+FD+A + M+ G S T N +++ L + G +EA ++
Sbjct: 553 VDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKEL 612
Query: 488 VKTSKERGI 496
+ G+
Sbjct: 613 MTMMVLWGV 621
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 119/231 (51%), Gaps = 3/231 (1%)
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A E+ ++++ + +N +S K E+H+ + ++ G+ + TFN ++
Sbjct: 187 ACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVH 246
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ---ADR 390
LC+ + ++AL +++ G+ PN +T+N+++ C +GD+ +L+L +KM+ A
Sbjct: 247 ALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGS 306
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
I P+ T+N+LI FC++ I AE+ M+ + + P+ +Y+ +I+ ++G +EA
Sbjct: 307 IKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEAL 366
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ M + G P+S N I+ L +G + A + ++ I F
Sbjct: 367 RLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKF 417
>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
Length = 506
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 210/460 (45%), Gaps = 49/460 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
++P+ Y +I + +DL + + + + +N L+ G+C D+A+
Sbjct: 86 VTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAM 145
Query: 66 RLV-KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE--RNVCPNEATVRSLV 122
+V + M L PNV+++TI++ G C+ R E +L +M + PN + +++
Sbjct: 146 DIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVI 205
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + DP KA+ A R+M DR L
Sbjct: 206 DGLLKGGDPDKAY-----------------------------------ATYREMLDRRIL 230
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P + + L G +++ + D +K GV P TY L+ +G+ E ++
Sbjct: 231 PNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKF 290
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + + + NV +Y+ +D CK A +I M R + P++ T+++L+ G+
Sbjct: 291 LEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAI 350
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + L ++++ +PD + FN++I + + ++A+ S+M + G+ PN +T
Sbjct: 351 EGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVT 410
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y+ LI C I + +L LFQ+M ++ +SP+ T+N ++Q R + A++ + ++
Sbjct: 411 YSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAKEFYVQII 470
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
G K LI+ G +E FLSME N C+
Sbjct: 471 KSGK-----------KDLIEQGLLEELDDLFLSMEDNDCS 499
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 183/423 (43%), Gaps = 42/423 (9%)
Query: 78 PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK--AF 135
P V+TY ILI C+A R+ F L + ++ L+ G+ C D A
Sbjct: 88 PTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGL--CADKRTDDAM 145
Query: 136 ELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
++++R M + +T++ + L + + + EA +L M D G
Sbjct: 146 DIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDG-------------- 191
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
G P +Y +++ L K G + + R++ N
Sbjct: 192 -------------------GGCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPN 232
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
V Y+ +I CK MD+A E+ M + PN T+ +L+ G C ++ + + L
Sbjct: 233 VVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLE 292
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
+ G +P+ T++S +D LC+ R +A MV+ G+ P+ TY+ L+ G
Sbjct: 293 KMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEG 352
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
+ LF M + PD Y FN LI + + K+++A F M GL+P+ +YS
Sbjct: 353 ALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYS 412
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD----IVKT 490
LI K R + A F M NG +P+ T N++L+ L + GR A + I+K+
Sbjct: 413 TLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAKEFYVQIIKS 472
Query: 491 SKE 493
K+
Sbjct: 473 GKK 475
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 139/282 (49%), Gaps = 2/282 (0%)
Query: 218 PRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR--LVSNVNSYNMVIDCFCKVNMMDRAT 275
P ++ ++++ L R E L+ + D + NV SY+ VID K D+A
Sbjct: 159 PNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAY 218
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
REM DR I PN+V ++++I+ CK + K E+ +++ G P+ FT+ S++
Sbjct: 219 ATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGF 278
Query: 336 CRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDI 395
C + + +A+ L +M GV PN +TY+ + LC G + ++F M + PDI
Sbjct: 279 CSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDI 338
Query: 396 YTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
T+++L+ + + + F M+ ++PD++ ++ LI A K G+ DEA F
Sbjct: 339 TTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSK 398
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
M Q G P+ T + ++ + R E A + + G+S
Sbjct: 399 MRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVS 440
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 3/182 (1%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P T+ +I C C A R + L +V+ G I +N L++ LCA ++ +
Sbjct: 88 PTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDI 147
Query: 383 -FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML--TLGLRPDNFSYSALIKA 439
+ M P++++ +++ C N+ ++A + M G P+ SYS +I
Sbjct: 148 VLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDG 207
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
L+K G D+A T+ M P+ + I+ L + ++A ++ + G++
Sbjct: 208 LLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPN 267
Query: 500 SF 501
F
Sbjct: 268 CF 269
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 198/437 (45%)
Query: 24 NSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTY 83
N++D A F +M P + L+ I ++ L L QM+ G P+VYT
Sbjct: 91 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 150
Query: 84 TILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME 143
ILI+ FC+ +R+ F VL + + P+ T +L+ G+ +A L + +
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 210
Query: 144 REPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNE 203
+ TL+ L S A +LR M + P ++ + L + E
Sbjct: 211 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 270
Query: 204 TCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
+ I +G+ P TY L+ AL LN + +++ NV ++ V+D
Sbjct: 271 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 330
Query: 264 CFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
CK M+ A ++ M R + P++VT+ L+ GHC +E+ + ++ ++ G P
Sbjct: 331 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 390
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
+ ++N +I+ C+ R + A+ L +M G+ +T+TYN LI LC +G + ++ LF
Sbjct: 391 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 450
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
+M A PD+ T+ L+ C+ + + +A ++ L D Y+ I + ++
Sbjct: 451 HEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRA 510
Query: 444 GRFDEAKQTFLSMEQNG 460
G + A+ F ++ G
Sbjct: 511 GELEAARDLFSNLSCQG 527
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 173/383 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P N +I++ + A+ ++ C+PD T+N LI G+C G + EA
Sbjct: 142 GIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEA 201
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L + G G+ P+V TY L++G C + R+L M ++N PN +++
Sbjct: 202 LHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDS 261
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF L + + N+L++ L N +L +M + +P
Sbjct: 262 LCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPN 321
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F V L + ++D IKRGV+P TY LM+ E + +
Sbjct: 322 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFD 381
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ V NV SYN++I+ +C++ MD+A + +M + + + VT+NTLI G C
Sbjct: 382 TMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVG 441
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ L ++ G PD T+ ++D LC+ H +A+ L + + + + YN
Sbjct: 442 RLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYN 501
Query: 365 ILIRSLCAIGDVARSLRLFQKMQ 387
I I +C G++ + LF +
Sbjct: 502 IAIDGMCRAGELEAARDLFSNLS 524
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 185/411 (45%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PST + ++ ++ K QM PD +T NILI+ C + + A +
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 169
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ LG P+ T+ LI G C ++ E + + P+ T +L++G+ +
Sbjct: 170 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 229
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ A LL +++ + NT++ L + +EA + +M +G P+ T
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 289
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + L + +L+ + + P + +++AL K G ++ +
Sbjct: 290 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 349
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K + +V +Y ++D C + MD A ++ M + PN+ ++N LI+G+C+ +
Sbjct: 350 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 409
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
K LL + G D T+N++I LC R + A+ EMV G P+ +TY IL+
Sbjct: 410 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 469
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
LC +A ++ L + ++ + DI +N I CR ++E A F
Sbjct: 470 DYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLF 520
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 151/321 (47%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A ++L K+ G P+++TF+ + L + E + D I G +P TY LM
Sbjct: 166 AFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMN 225
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
L K G R L + + NV +YN +ID CK + A + EM + I+P
Sbjct: 226 GLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISP 285
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
++ T+N+LI C E LL ++ P+ F++++D LC+ A D +
Sbjct: 286 DIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVV 345
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
M++ GV P+ +TY L+ C ++ ++++F M P++ ++N LI +C++
Sbjct: 346 DMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 405
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+++KA M GL D +Y+ LI L GR A F M +G PD T
Sbjct: 406 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 465
Query: 469 NLILETLVQQGRFEEAHDIVK 489
++L+ L + EA ++K
Sbjct: 466 RILLDYLCKNHHLAEAMVLLK 486
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%)
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
N +D A M P+ V F L++ K L + G PD +T
Sbjct: 91 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 150
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N +I+ C R A L+++++ G P+ T+N LIR LC G + +L LF K
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 210
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ PD+ T+ L+ C++ A + SM+ RP+ +Y+ +I +L K + E
Sbjct: 211 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 270
Query: 449 AKQTFLSMEQNGCNPDSYTSNLILETL 475
A F M G +PD +T N ++ L
Sbjct: 271 AFNLFSEMITKGISPDIFTYNSLIHAL 297
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 215/462 (46%), Gaps = 17/462 (3%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ +YNAV LV I LA + +M C P+ TY +L+ G+C+ G+ +AL++
Sbjct: 177 PTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKM 236
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+M G P+V YT+L+ CN R+ + R+L MKE P+E T + G+ +
Sbjct: 237 FDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCK 296
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+AF ++ T L+ + L+ L E + +M + P+ +
Sbjct: 297 AGRVDEAFHRF-ELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDIT 355
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
+ + + +LD +G P Y L++AL+ G ++ +
Sbjct: 356 LYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEM 415
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
++ +V + ++N++I CK ++D+A ++ EM + P ++T+N LI G + +
Sbjct: 416 LQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGML 475
Query: 307 HKTRELLVMLLECGFKPDKF--------------TFNSMIDCLCRAHRFEDALDCLSEMV 352
+ R +L +E G P F + ++D +C++ + A L ++
Sbjct: 476 EEAR-MLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGII 534
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
E GV P+ +TYN LI LC ++ +LRLF+++Q ISPD T+ LI R ++
Sbjct: 535 ESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHREN 594
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
A F ++L G P Y+ ++++L + + +A +L
Sbjct: 595 DATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWL 636
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 206/498 (41%), Gaps = 23/498 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ + + A++ A + A F +M C+P F YN + + GV+ A
Sbjct: 139 GLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLA 198
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M G PN TY +L+DG C + ++ + M ER + P+ L+
Sbjct: 199 LALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSS 258
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A LL E ++ L L EA + D G+
Sbjct: 259 LCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLG 318
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ +CL+ GL +E + + + P + Y +L+ +AGR +
Sbjct: 319 LIGY----SCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAF 374
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L+ + V + YN ++ V +DRA + EM ++ + T N +I G
Sbjct: 375 LLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGL 434
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP-- 358
CK + K ++ + E G P T+N++ID L RA E+A +M E G P
Sbjct: 435 CKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKM-EMGNNPSL 493
Query: 359 ------------NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
+T + L+ +C G V ++ +L + + + PD+ T+N LI C
Sbjct: 494 FLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLC 553
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ ++ A + F + G+ PD +Y LI L ++ R ++A F ++ ++G P
Sbjct: 554 KAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLP 613
Query: 467 TSNLILETLVQQGRFEEA 484
N ++ +L + + +A
Sbjct: 614 IYNTMMRSLCRMKKLSQA 631
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/509 (23%), Positives = 224/509 (44%), Gaps = 20/509 (3%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P++ Y ++D L K A F +M PD Y +L+ +C G +++A
Sbjct: 209 GCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDA 268
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL+ M+ G P+ TYT+ + G C A RV E F E++++ L+ G
Sbjct: 269 GRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDG 328
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F+ + + + + L+ R + +A +L +M D+G++P+
Sbjct: 329 LFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPD 388
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ + L +++ ++ ++ V +T+ +++ L K G + + +
Sbjct: 389 TFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFD 448
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD---------IAPNLV---- 291
+ + V +YN +ID + M++ A + +M + + N V
Sbjct: 449 EMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTE 508
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
+ L+ G C+ +V K +LL ++E G PD T+N++I+ LC+A + AL E+
Sbjct: 509 SLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKEL 568
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
G+ P+ ITY LI L + LFQ + P + +N +++S CRM K+
Sbjct: 569 QLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKL 628
Query: 412 EKAEKAFFSML--TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ--NGCNPDSYT 467
+A + L L P++ A + + G DE + + ++Q NP+ YT
Sbjct: 629 SQAINLWLDYLPKKYNLSPED-EVIANARKCFEDGFLDETVKELIKIDQVYGSLNPNPYT 687
Query: 468 SNLILETLVQQGRFEEAHDIVKTSKERGI 496
+I L Q + ++A I +E GI
Sbjct: 688 IWVI--GLCQVRKIDDALRIFHILEEFGI 714
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 164/385 (42%), Gaps = 50/385 (12%)
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
S+ EA +MGD P + ++ LV + + + + G P
Sbjct: 155 SSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNS 214
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
+TY++LM+ L K G V+ + + + + +V +V Y +++ C ++ A +
Sbjct: 215 TTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCS 274
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M++ P+ VT+ +SG CK V + +L + GF ++ +ID L +A R
Sbjct: 275 MKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGR 334
Query: 341 FE-----------------------------------DALDCLSEMVEWGVPPNTITYNI 365
F+ DA L EM + G P+T YN
Sbjct: 335 FDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNT 394
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L+++L +G++ R+ L +M + + D T N +I C+ I+KA + F M G
Sbjct: 395 LLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHG 454
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP--------------DSYTSNLI 471
P +Y+ALI L ++G +EA+ F ME G NP D+ + +
Sbjct: 455 CHPTVMTYNALIDGLYRAGMLEEARMLFHKMEM-GNNPSLFLRLTLGANQVRDTESLRKL 513
Query: 472 LETLVQQGRFEEAHDIVKTSKERGI 496
++ + Q G+ +A+ +++ E G+
Sbjct: 514 VDGMCQSGQVLKAYKLLRGIIESGV 538
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 161/359 (44%), Gaps = 19/359 (5%)
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
L+ L MA +A + +M +RG +P+ + ++ L + + +L + +
Sbjct: 219 VLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKEN 278
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
G P TY + + L KAGR E + + Y+ +ID + D
Sbjct: 279 GCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEG 338
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC---GFKPDKFTFNSM 331
EM + I+P++ + LI + AE +T++ ++L E GF PD F +N++
Sbjct: 339 LSYYTEMLGKSISPDITLYTILIR---RFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTL 395
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
+ L + A +SEM++ V ++ T+NI+I LC G + +++++F +M
Sbjct: 396 LKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGC 455
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSM-----------LTLGLRP--DNFSYSALIK 438
P + T+NALI R +E+A F M LTLG D S L+
Sbjct: 456 HPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVD 515
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ +SG+ +A + + ++G PD T N ++ L + + A + K + +GIS
Sbjct: 516 GMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGIS 574
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/432 (21%), Positives = 182/432 (42%), Gaps = 31/432 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T YN ++ AL +ID A +M + D T+NI+I G+C+ G++D+A
Sbjct: 384 GFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKA 443
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ +M G P V TY LIDG A + E + M+ N N + L G
Sbjct: 444 MQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGN---NPSLFLRLTLG 500
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D T+ L L+ + + +A +LR + + G +P+
Sbjct: 501 ANQVRD-----------------TESL--RKLVDGMCQSGQVLKAYKLLRGIIESGVVPD 541
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L +L+ + +G+ P TY L++ L++A R+ +
Sbjct: 542 VVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQ 601
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK-- 302
++ + ++ YN ++ C++ + +A + + + NL + +I+ K
Sbjct: 602 NILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKY--NLSPEDEVIANARKCF 659
Query: 303 -DAEVHKTRELLVMLLEC--GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
D + +T + L+ + + P+ +T + LC+ + +DAL + E+G+
Sbjct: 660 EDGFLDETVKELIKIDQVYGSLNPNPYTI--WVIGLCQVRKIDDALRIFHILEEFGIVVT 717
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+LI LC ++ ++ + + R N L++S C + A+ +
Sbjct: 718 PACCALLINYLCWDRNLNAAVDIMMYTLSKRFIVSQPVGNRLLRSLCIRYRRHDAQALSW 777
Query: 420 SMLTLGLRPDNF 431
M +G D +
Sbjct: 778 RMHLVGYDMDVY 789
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%)
Query: 346 DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSF 405
D L++ G+P + + L+ + + G ++ F +M P + +NA+ Q
Sbjct: 130 DALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVL 189
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
I A + M++ G P++ +Y L+ L K G +A + F M + G PD
Sbjct: 190 VDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDV 249
Query: 466 YTSNLILETLVQQGRFEEAHDIVKTSKERG 495
++L +L +GR E+A ++ + KE G
Sbjct: 250 KIYTVLLSSLCNEGRIEDAGRLLCSMKENG 279
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%)
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
F AL+ + + ++A +AF M RP F Y+A+ + L+ G A + M
Sbjct: 146 AFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRM 205
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+GC P+S T ++++ L ++G +A + ERGI
Sbjct: 206 VSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGI 245
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 200/443 (45%), Gaps = 41/443 (9%)
Query: 57 RIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE---RNVCP 113
R G ++ + ++QM G V ++T ++DG C + EV R +M E + P
Sbjct: 165 RSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLC---KKGEVVRAKALMDELVCKGFKP 221
Query: 114 NEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAIL 173
+ T +L++G D E+L ME+ + + T+L + S E A L
Sbjct: 222 SVITYNTLLNGYIEIKDVGGVNEIL-SLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKL 280
Query: 174 RKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
D +K+G++P Y ++ K
Sbjct: 281 ----------------------------------FDEMLKKGIEPDVYIYTSIINWNCKF 306
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
G + + + RLV N +Y +I+ CK M A + +M+ + + N V F
Sbjct: 307 GNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIF 366
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
NTL+ G+CK + + L ++ + GF+ D FT N + CR++R E+A L M E
Sbjct: 367 NTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEE 426
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
GV PN ++++ILI C + A + RLF+ M+ +P + T+NA I+ +C+ K+E+
Sbjct: 427 RGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEE 486
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
A K M GL PD ++Y++LI SG D A + F M Q G N + T +I+
Sbjct: 487 AYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIIS 546
Query: 474 TLVQQGRFEEAHDIVKTSKERGI 496
L + GR +EA + + GI
Sbjct: 547 GLSKDGRADEAFKLYDEMNKEGI 569
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 201/461 (43%), Gaps = 35/461 (7%)
Query: 19 ALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAP 78
AL +S +++L +QM + ++ ++ G+C+ G V A L+ ++ G+ P
Sbjct: 162 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 221
Query: 79 NVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELL 138
+V TY L++G+ K V V +L +M E+NV T + +L
Sbjct: 222 SVITYNTLLNGYIEIKDVGGVNEILSLM-EKNVVDYNVT----------------TYTML 264
Query: 139 IRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTG 198
I + R +S EA + +M +G P+ + +
Sbjct: 265 IEWYSR------------------SSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKF 306
Query: 199 LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSY 258
++ + D +R + P TY L+ KAG + +N + + N +
Sbjct: 307 GNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIF 366
Query: 259 NMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLE 318
N ++D +CK M+D A + M+ + + T N + SG C+ + + LL+ + E
Sbjct: 367 NTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEE 426
Query: 319 CGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVAR 378
G P+ +F+ +ID C+ F +A M + G P+ +TYN I C G +
Sbjct: 427 RGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEE 486
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+ +L +MQ + PD YT+ +LI +++A + F M LGL + +Y+ +I
Sbjct: 487 AYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIIS 546
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
L K GR DEA + + M + G PD + ++ +L + G
Sbjct: 547 GLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 587
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 182/408 (44%), Gaps = 37/408 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS YN +++ ++ + M + + TY +LI R ++EA
Sbjct: 218 GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEA 277
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L +M G P+VY YT +I+ C + F + + M ER + PN T +L++G
Sbjct: 278 EKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALING 337
Query: 125 VFRCLDPHKAFELLIRFMEREPL-TQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ + KA E+++ M+ + + +++ NTL+ M EA + M +G+
Sbjct: 338 ACKAGE-MKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEI 396
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ T + + E +L T +RGV P
Sbjct: 397 DAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAP------------------------- 431
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
NV S++++ID +CK A + + M + AP++VT+N I +CK
Sbjct: 432 ----------NVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKK 481
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + +L+ + E G PD +T+ S+ID + + AL+ +EM + G+ N +TY
Sbjct: 482 GKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTY 541
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
++I L G + +L+ +M + I PD +++LI S ++ +
Sbjct: 542 TVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 589
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 194/456 (42%), Gaps = 55/456 (12%)
Query: 78 PNVYTYTILIDGFCNAKRVAEVFRVLE-IMKERNVCPNEATVRSLVHGVFRCLDPHKAFE 136
P++ + IL A++ AE+ VL+ I+ + N+ N + S + G F
Sbjct: 62 PDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSIGGEFN--------- 112
Query: 137 LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY-LPESSTFDYTVTCL 195
EP + C+ L +N M + + +G+ + E S F++ +
Sbjct: 113 --------EPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALK 164
Query: 196 VTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNV 255
+G ++ L + G++ R ++ +++ L K G V ++ + +V
Sbjct: 165 RSG-NMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSV 223
Query: 256 NSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVM 315
+YN +++ + ++ + EI M + N+ T+ LI + + +++ + +L
Sbjct: 224 ITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDE 283
Query: 316 LLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG- 374
+L+ G +PD + + S+I+ C+ + A EM E + PN TY LI C G
Sbjct: 284 MLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGE 343
Query: 375 ----------------DVAR------------------SLRLFQKMQADRISPDIYTFNA 400
DV R +LRL MQ D +T N
Sbjct: 344 MKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNI 403
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
+ FCR N+ E+A++ +M G+ P+ S+S LI K F EA++ F ME+ G
Sbjct: 404 IASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKG 463
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
P T N +E ++G+ EEA+ ++ +ERG+
Sbjct: 464 KAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGL 499
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 145/349 (41%), Gaps = 35/349 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +Y ++I+ K ++ A++ F +M+ + P+ +TY LI+G C+ G + A
Sbjct: 288 GIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAA 347
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+V M+ G N + L+DG+C + E R+ IM++
Sbjct: 348 EMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQ---------------- 391
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
K FE+ CN + ++ EA +L M +RG P
Sbjct: 392 --------KGFEI-----------DAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPN 432
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+F + + E + K+G P TY +E K G+ E + +N
Sbjct: 433 VVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLIN 492
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + L+ + +Y +ID +DRA E+ EM + N+VT+ +ISG KD
Sbjct: 493 EMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDG 552
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
+ +L + + G PD ++S+I L + L+ + + +E
Sbjct: 553 RADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLENVVDRIE 601
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 107/231 (46%)
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
M+ E R+M D I + ++ ++ G CK EV + + L+ L+ GFKP T+N+
Sbjct: 169 MELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNT 228
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+++ + LS M + V N TY +LI + + +LF +M
Sbjct: 229 LLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKG 288
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
I PD+Y + ++I C+ +++A F M L P+ ++Y ALI K+G A+
Sbjct: 289 IEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAE 348
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
M+ G + + N +++ ++G +EA + +++G +F
Sbjct: 349 MMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAF 399
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 132/299 (44%), Gaps = 19/299 (6%)
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD--------RLVSNVNS-YN--MVIDCF 265
KP +L+L LY+A + E L + D R+VS++ +N +++ F
Sbjct: 61 KPDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIVEKF 120
Query: 266 CKV--------NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
C + M D + E+ R + + + + + + E L ++
Sbjct: 121 CDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMV 180
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
+ G + ++ +++D LC+ A + E+V G P+ ITYN L+ I DV
Sbjct: 181 DSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVG 240
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+ M+ + + ++ T+ LI+ + R +KIE+AEK F ML G+ PD + Y+++I
Sbjct: 241 GVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSII 300
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
K G A F M + P++YT ++ + G + A +V + +G+
Sbjct: 301 NWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGV 359
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 231/500 (46%), Gaps = 13/500 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ ++ ALV F+++ + D F + +++ C + D +
Sbjct: 70 PSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSV 129
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVC-PNEATVRSLVHGVF 126
+ G N T+T LI G +V + + + + N+C P+E +++ G+
Sbjct: 130 LAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLC 189
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVC--NTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KAF+LL R ME + +T+ C N ++ + M A ++L +M + P+
Sbjct: 190 KKGHTQKAFDLL-RLME-QGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPD 247
Query: 185 SSTFDYTVTCLVTGL-DLNETCGILDTF---IKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
T+ T L+ GL L++ + F I + P T+ +++ L K G+ + +
Sbjct: 248 IITY----TSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAE 303
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ ++ + + N +YN+V+D +C M RA I M D+ I P+++++ LI+G+
Sbjct: 304 EIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGY 363
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ ++ K +L + + G KP T + ++ L R E A EM G PN
Sbjct: 364 VEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNL 423
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
T+ L+ G V ++ F K++ R +I + A+I C+ K++KA F
Sbjct: 424 YTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEK 483
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+ +GL PD +Y+A+I + G DEAK ME NGC PD+ T N+I+ + +
Sbjct: 484 LPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSK 543
Query: 481 FEEAHDIVKTSKERGISFKS 500
E +K + SF++
Sbjct: 544 VSEMKAFLKEIAGKSFSFEA 563
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 155/347 (44%), Gaps = 37/347 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P Y ++ID L K + + F +M PD T+N +I G+C+ G V++A
Sbjct: 244 IPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAE 303
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
++ M G PN TY +++DG+C ++ R+ + M ++ + P+ + +L++G
Sbjct: 304 EIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGY 363
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLV-CNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
KA +L R + + L +V C+ LL L A +M G++P
Sbjct: 364 VEKKKMDKAMQLF-REISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIP- 421
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+L C +L + K G L+ EA+ + +
Sbjct: 422 ---------------NLYTHCTLLGGYFKNG---------LVEEAM----------SHFH 447
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + R +N+ Y VI+ CK +D+A ++ + P+++T+ +ISG+C++
Sbjct: 448 KLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEG 507
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
+ + +++L + + G PD T+N ++ R+ + + L E+
Sbjct: 508 LLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEI 554
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 66/112 (58%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
++Y AVI+ L K+ +D A+ F+++ + PD TY +I G C+ G++DEA ++++
Sbjct: 459 QIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRK 518
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
ME G P+ TY +++ GF + +V+E+ L+ + ++ ATV L+
Sbjct: 519 MEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLM 570
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 77/158 (48%), Gaps = 2/158 (1%)
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
+DA +MV P+ ++++ L+++L + + + +F+++ RI D + +
Sbjct: 53 LDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALST 112
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM-EQN 459
++ S C M++ + G+ + +++ LI+ L + +A F + +N
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
C PD +++ L ++G ++A D+++ E+GI+
Sbjct: 173 ICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLM-EQGIT 209
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 90/220 (40%), Gaps = 35/220 (15%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P Y A+I+ V+ +D A F+++S + KP T ++L+ G+ +G + A
Sbjct: 348 GIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECA 407
Query: 65 LRLVKQMEGLGYAPNVYT-----------------------------------YTILIDG 89
+M+ G+ PN+YT YT +I+G
Sbjct: 408 KIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVING 467
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C ++ + E + + P+ T +++ G + +A ++L + + L
Sbjct: 468 LCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPD 527
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD 189
N ++ +S SE A L+++ + + E++T +
Sbjct: 528 NRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVE 567
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 42/88 (47%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ +G+ P Y A+I + +D A ++M + C PD TYN+++ G R
Sbjct: 484 LPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSK 543
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID 88
V E +K++ G ++ T +L+D
Sbjct: 544 VSEMKAFLKEIAGKSFSFEAATVELLMD 571
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 165/333 (49%), Gaps = 1/333 (0%)
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
C ++ L + + R+M + G P + + L + + +L+ +
Sbjct: 111 CTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMV 170
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDR-YLNHVFKDRLVSNVNSYNMVIDCFCKVNMM 271
RG+KP T+ L++ L K G R +L + NV++Y ++I +C+ +
Sbjct: 171 GRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKL 230
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
RA + M ++ + PN T+ TLI GHCK + EL+ + + GF P+ +T+N++
Sbjct: 231 ARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAV 290
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
ID C+ + ++A L G+ + ITY ILI C G + +L LF +M +
Sbjct: 291 IDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGC 350
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
PDI + +LI ++C+ ++E+++K F L +GL P +Y+++I K GR A +
Sbjct: 351 CPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALR 410
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
F M QNGC DS T ++ L ++ R EEA
Sbjct: 411 VFERMVQNGCFADSITYGALISGLCKESRLEEA 443
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 178/424 (41%), Gaps = 34/424 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP R + A++ + ++ M D T +++ +C G +
Sbjct: 68 GVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDV 127
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++M G PNV YT IDG C + V + F VLE M R + PN T +L+ G
Sbjct: 128 SEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDG 187
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF L ++ ++ Y P
Sbjct: 188 LCKIGWTERAFRLFLKLIKSSS----------------------------------YKPN 213
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + L +L +++G+KP +TY L+ K G +N
Sbjct: 214 VHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMN 273
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ + N+ +YN VID FCK + A ++ R + + + +T+ LI+ HCK
Sbjct: 274 KMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQG 333
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +L ++E G PD + S+I C+ + E++ + + G+ P TY
Sbjct: 334 HITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYT 393
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I C +G +LR+F++M + D T+ ALI C+ +++E+A+ + ML
Sbjct: 394 SMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDK 453
Query: 425 GLRP 428
L P
Sbjct: 454 RLVP 457
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 178/448 (39%), Gaps = 44/448 (9%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N V+ +++ S A F M+ P + L+ CR G V+E L+ M
Sbjct: 42 NWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWR 101
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G++ + T T+++ C R +V M E PN + + G
Sbjct: 102 YGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDG--------- 152
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
L +A +L +M RG P YT T
Sbjct: 153 --------------------------LCKRRYVKQAFHVLEEMVGRGLKPNV----YTHT 182
Query: 194 CLVTGL-DLNETCGILDTFIK----RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
L+ GL + T F+K KP TY +++ + G+ + L + +
Sbjct: 183 TLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVE 242
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
L N N+Y +I CK DRA E+ +M+ PN+ T+N +I G CK ++ +
Sbjct: 243 QGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQE 302
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
++L M G K DK T+ +I C+ ALD MVE G P+ Y LI
Sbjct: 303 AYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIS 362
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
+ C + S + F K + P T+ ++I +C++ + A + F M+ G
Sbjct: 363 TYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFA 422
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSM 456
D+ +Y ALI L K R +EAK + M
Sbjct: 423 DSITYGALISGLCKESRLEEAKALYEGM 450
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 136/309 (44%), Gaps = 36/309 (11%)
Query: 226 LMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
++ A +AGR E + + L V + N V+ + A ++ M
Sbjct: 9 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
++P F L+ C++ +V + LL + GF D T ++ LC RF+D
Sbjct: 69 VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128
Query: 346 DCLSEMVEWGVPPNTI-----------------------------------TYNILIRSL 370
+ M+E G PPN + T+ LI L
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188
Query: 371 CAIGDVARSLRLFQKM-QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
C IG R+ RLF K+ ++ P+++T+ +I +CR K+ +AE M+ GL+P+
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 248
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y+ LI K G FD A + M+Q G P+ YT N +++ ++G+ +EA+ +++
Sbjct: 249 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 308
Query: 490 TSKERGISF 498
+ +G+ F
Sbjct: 309 MATSQGLKF 317
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ + Y ++I K LA F++M + C D TY LI G+C+ ++E
Sbjct: 383 IGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEE 442
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERN 110
A L + M P T L +C ++ + VL+ + +R
Sbjct: 443 AKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQ 489
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 222/497 (44%), Gaps = 39/497 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ YN V+D L K+ ++ A M+++ C PD +YN +++G+ + +DEA +
Sbjct: 589 PNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWM 648
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR-VLEIMKERNVCPNEATVRSLVHGVF 126
QM+ + AP+ T ++ F + + E V E + + + + ++V SL+ G+
Sbjct: 649 FCQMKKV-LAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGIL 707
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ K+ E L L + ++ L + A A +++K + G ++
Sbjct: 708 KRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTG 767
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKR-GVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+++ + C + DL + L + +KR G P TY L+++A+ K+ R + +
Sbjct: 768 SYN-ALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEE 826
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ S +YN +I K M+D A + ++ +P T+ L+ G KD
Sbjct: 827 MHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGN 886
Query: 306 VHKTRELLVMLLECG-----------------------------------FKPDKFTFNS 330
+ L +LECG PD ++
Sbjct: 887 IEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTV 946
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+ID LC R D L ++ + G+ P+ ITYN+LI L G + +L L+ M+
Sbjct: 947 VIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG 1006
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
I+P++YT+N+LI + K +A K + +L G +P+ F+Y+ALI+ SG + A
Sbjct: 1007 IAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAF 1066
Query: 451 QTFLSMEQNGCNPDSYT 467
+ M GC P+S T
Sbjct: 1067 AAYGRMIVGGCRPNSST 1083
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/486 (24%), Positives = 220/486 (45%), Gaps = 3/486 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ R Y+ ++ A K + +M +P+ ++Y I I + + G ++EA
Sbjct: 201 GVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEA 260
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++++ME G P+V T T+LI C+A R+A+ V MK + P+ T +L+
Sbjct: 261 YRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDK 320
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTL-LYRLSNNSMASEAAAILRKMGDRGYLP 183
D E+ ++ + +V T + L EA + +M +G +P
Sbjct: 321 CGDSGDSRSVSEIW-NALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIP 379
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ +++ ++ + N + + G P T++L + K+G ++ +
Sbjct: 380 QQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRY 439
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +V +V + N V+ K + A + E++ I+P+ +T+ +I K
Sbjct: 440 ELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKA 499
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + ++ ++E PD NS+ID L +A R +A E+ E + P TY
Sbjct: 500 SNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTY 559
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L+ L G V ++L + M ++ P+I T+N ++ C+ ++ A +SM
Sbjct: 560 NTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTM 619
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G PD SY+ ++ L+K R DEA F M++ PD T IL + V+ G +E
Sbjct: 620 NGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKE 678
Query: 484 AHDIVK 489
A V+
Sbjct: 679 ALHTVR 684
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 211/480 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI + YN +I LVKS A ++ M+ D P TY++L+ + +
Sbjct: 166 GIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETV 225
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +ME G PNVY+YTI I A R+ E +R+L M+E P+ T L+
Sbjct: 226 VGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQI 285
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ A ++ + + ++ TLL + ++ + + I + GY
Sbjct: 286 LCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDN 345
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ V L ++E + D ++G+ P+ +Y L+ KA R N
Sbjct: 346 VVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFN 405
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
H+ N ++ + I+ K +A + M+ + I P++V N ++ G K
Sbjct: 406 HMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTG 465
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + L G PD T+ MI C +A ++A+ +EM+E P+ + N
Sbjct: 466 RLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMN 525
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI L G + ++F +++ + P T+N L+ R K+++ + M +
Sbjct: 526 SLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSN 585
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
P+ +Y+ ++ L K+G + A SM NGC PD + N ++ LV++ R +EA
Sbjct: 586 SFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEA 645
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/527 (23%), Positives = 224/527 (42%), Gaps = 35/527 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P NAV+ L K+ + +A F ++ PD TY ++I + DEA
Sbjct: 446 GIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEA 505
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ +M AP+V LID A R E +++ +KE N+ P + T +L+ G
Sbjct: 506 MKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAG 565
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R + +LL + NT+L L N + A +L M G +P+
Sbjct: 566 LGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPD 625
Query: 185 SSTFDYTVTCLVTGLDLNET------------------CGILDTFIKRGV-KPRFST--- 222
S+++ + LV L+E C IL +F++ G+ K T
Sbjct: 626 LSSYNTVMYGLVKEDRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVRE 685
Query: 223 YLL-------------LMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
Y+L LME + K + + ++ L+ + + +I CK
Sbjct: 686 YILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHK 745
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
A E+ ++ + ++ ++N LI G + + EL + G PD+FT++
Sbjct: 746 EALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYH 805
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++D + ++ R ED L EM G +TYN +I L + ++ L+ ++ ++
Sbjct: 806 LILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSE 865
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
SP T+ L+ + IE AE F ML G P+ Y+ L+ +G ++
Sbjct: 866 GFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKV 925
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ F SM + G NPD + ++++TL GR + K + G+
Sbjct: 926 CELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGL 972
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 197/451 (43%), Gaps = 2/451 (0%)
Query: 46 FTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEI 105
+TYN LI+ + + G EA+ + K M G P V TY++L+ F + V +L
Sbjct: 172 YTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGE 231
Query: 106 MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNS 164
M+ R V PN + + + + +A+ +L R ME E +V NT+L + L +
Sbjct: 232 MEARGVRPNVYSYTICIRVLGQAGRLEEAYRIL-RKMEEEGCKPDVVTNTVLIQILCDAG 290
Query: 165 MASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYL 224
++A + KM P+ T+ + D I + G +Y
Sbjct: 291 RLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYT 350
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
++AL + GR E + + + ++ SYN +I F K + +RA E+ M
Sbjct: 351 AAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIH 410
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
PN T I+ H K E K + ++ G PD N+++ L + R A
Sbjct: 411 GPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMA 470
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
E+ G+ P+ ITY ++I+ + ++++F +M +R +PD+ N+LI
Sbjct: 471 KRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDM 530
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+ + +A K F+ + + L P + +Y+ L+ L + G+ E Q M N P+
Sbjct: 531 LYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPN 590
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
T N +L+ L + G A D++ + G
Sbjct: 591 IITYNTVLDCLCKNGEVNYALDMLYSMTMNG 621
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/538 (21%), Positives = 234/538 (43%), Gaps = 49/538 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y I L ++ ++ AY ++M + CKPD T +LI +C G + +A
Sbjct: 236 GVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADA 295
Query: 65 LRLVKQMEGL-----------------------------------GYAPNVYTYTILIDG 89
+ +M+ GY NV +YT +D
Sbjct: 296 KDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDA 355
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C RV E V + MK++ + P + + SL+ G + ++A EL P
Sbjct: 356 LCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPN 415
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRK---MGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
T + ++ + + E+ L++ M +G +P+ + + L L
Sbjct: 416 GY---THVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKR 472
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+ G+ P TY ++++ KA E + + ++R +V + N +ID
Sbjct: 473 VFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLY 532
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K + A +I E+++ ++ P T+NTL++G ++ +V + +LL + F P+
Sbjct: 533 KAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNII 592
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+N+++DCLC+ ALD L M G P+ +YN ++ L + + +F +M
Sbjct: 593 TYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQM 652
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN----FSYSALIKALIK 442
+ ++PD T ++ SF R +++A ++ L+PD+ S +L++ ++K
Sbjct: 653 K-KVLAPDYATVCTILPSFVRSGLMKEA---LHTVREYILQPDSKVDRSSVHSLMEGILK 708
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+++ + ++ +G D + I+ L + AH++VK + G+S K+
Sbjct: 709 RDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKT 766
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 182/434 (41%), Gaps = 35/434 (8%)
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCN 154
RV +V +V ++M+ + + N T ++ V A L E + N
Sbjct: 116 RVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYN 175
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
L+Y L + EA + + M G +P T+ + D G+L R
Sbjct: 176 GLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEAR 235
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
GV+P +Y + + L +AGR E R L + ++ +V + ++I C + A
Sbjct: 236 GVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADA 295
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
++ +M+ D P+ VT+ TL+ + E+ L G+ + ++ + +D
Sbjct: 296 KDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDA 355
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI--------------------- 373
LC+ R ++ALD EM + G+ P +YN LI
Sbjct: 356 LCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPN 415
Query: 374 --------------GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
G+ ++L+ ++ M++ I PD+ NA++ + ++ A++ F
Sbjct: 416 GYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFH 475
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+ +G+ PDN +Y+ +IK K+ DEA + F M +N C PD N +++ L + G
Sbjct: 476 ELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAG 535
Query: 480 RFEEAHDIVKTSKE 493
R EA I KE
Sbjct: 536 RGNEAWKIFYELKE 549
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/476 (22%), Positives = 205/476 (43%), Gaps = 43/476 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN V+ LVK + +D A+ F QM PD T ++ R G++ EA
Sbjct: 621 GCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMK-KVLAPDYATVCTILPSFVRSGLMKEA 679
Query: 65 LRLVKQ-----------------MEGL----------GYAPNVYTYTILIDGF------- 90
L V++ MEG+ +A N+ + +L+D
Sbjct: 680 LHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIR 739
Query: 91 --CNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMER---E 145
C K +++ + V + +L+ G+ D E L M+R +
Sbjct: 740 HLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVD-EDLIDIAEELFSEMKRLGCD 798
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
P + + +L + + + I +M ++GY T++ ++ LV L+E
Sbjct: 799 P--DEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAI 856
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
+ + G P TY L++ L K G + + + + + N YN++++ +
Sbjct: 857 NLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGY 916
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
++ E+ M ++ + P++ ++ +I C D ++ L + G +PD
Sbjct: 917 RIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDL 976
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T+N +I L ++ R E+AL ++M + G+ PN TYN LI L G A + +++++
Sbjct: 977 ITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEE 1036
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
+ A P+++T+NALI+ + E A A+ M+ G RP++ +Y L ++
Sbjct: 1037 LLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPNQML 1092
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 159/360 (44%), Gaps = 35/360 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+S T YNA+I LV + ID+A F +M C PD FTY++++ + + +++
Sbjct: 760 LGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIED 819
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L++ ++M GY TY +I G +K + E + + P T L+
Sbjct: 820 MLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLD 879
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + + +A A+ +M + G P
Sbjct: 880 GLLK-----------------------------------DGNIEDAEALFDEMLECGCEP 904
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + D + C + ++ +++G+ P +Y ++++ L GR +G Y
Sbjct: 905 NCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYF 964
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ L ++ +YN++I K ++ A + +M + IAPNL T+N+LI K
Sbjct: 965 KQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKA 1024
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + ++ LL G+KP+ FT+N++I + E+A M+ G PN+ TY
Sbjct: 1025 GKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 123/290 (42%), Gaps = 35/290 (12%)
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+L+ + R+V S N +++ + ++ M+ + I N+ TF T+
Sbjct: 88 FLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVG 147
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ + L ++ E G + +T+N +I L ++ +A+D M GV P
Sbjct: 148 VEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVR 207
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TY++L+ + D + L +M+A + P++Y++ I+ + ++E+A + M
Sbjct: 208 TYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKM 267
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP------------------ 463
G +PD + + LI+ L +GR +AK F M+ + P
Sbjct: 268 EEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDS 327
Query: 464 ------------DSYTSNLI-----LETLVQQGRFEEAHDIVKTSKERGI 496
D Y N++ ++ L Q GR +EA D+ K++GI
Sbjct: 328 RSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGI 377
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/486 (24%), Positives = 219/486 (45%), Gaps = 3/486 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GISPS R Y+ ++ A K +D +M KP+ ++Y I I + + DEA
Sbjct: 201 GISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEA 260
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +ME G P+V T+T++I C+A R+++ V MK + P+ T +L+
Sbjct: 261 YHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDK 320
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNT-LLYRLSNNSMASEAAAILRKMGDRGYLP 183
D E+ M + +V T ++ L EA A+ +M ++G P
Sbjct: 321 CGDSGDSQSVVEVW-NAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSP 379
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
E +++ ++ + + + + G P T++L + K+G+ ++ +
Sbjct: 380 EQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRY 439
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
H+ +V +V + N V+ + A + E++ ++P+ +T+ +I K
Sbjct: 440 EHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKA 499
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ + ++E G PD NS+ID L + + +A ++ E + P TY
Sbjct: 500 SKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTY 559
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L+ L G V ++L ++M P++ T+N ++ + ++ A +SM
Sbjct: 560 NTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTE 619
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G PD SY+ ++ LIK R +EA + F M++ PD T IL + V+ G +E
Sbjct: 620 KGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKE 678
Query: 484 AHDIVK 489
A VK
Sbjct: 679 ALHTVK 684
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/506 (24%), Positives = 220/506 (43%), Gaps = 41/506 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P N++ID L K + A+ F ++ + +P TYN L+ G+ R G V E
Sbjct: 516 GCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEV 575
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+++M Y PN+ TY ++D V +L M E+ P+ ++ ++++G
Sbjct: 576 MQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYG 635
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +AF + + + +C L + N M + + G +
Sbjct: 636 LIKEERLEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVD 695
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLL--LMEALYKAGRDVEGDRY 242
S+F + ++ + ++ + RG+ + + L L+ L K + +E +
Sbjct: 696 KSSFHSLMEGILKKAGVEKSIEFAENIASRGI--LLNDFFLCPLIRHLCKHKKALEAHQL 753
Query: 243 LNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN------------ 289
N FK VS SYN +I N++D A ++ EM+ P+
Sbjct: 754 FNK-FKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMG 812
Query: 290 -----------------------LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
VT+NT+ISG K + + +L L+ GF P
Sbjct: 813 KSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPC 872
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+ ++D L ++ + DA + +EM+E+G PN YNIL+ G+ +LF+KM
Sbjct: 873 TYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKM 932
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
I+PDI ++ LI + C ++ F + LGL PD Y+ LI L KS R
Sbjct: 933 VEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERI 992
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLIL 472
+EA F M++ G P+ YT N ++
Sbjct: 993 EEAVSLFNEMKKKGIIPNLYTYNSLI 1018
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 213/482 (44%), Gaps = 4/482 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+S + YN +I LVKS A ++ M D P TY++L+ + VD
Sbjct: 166 GMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTV 225
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+ +ME G PNVY+YTI I A R E + +L M++ P+ T ++
Sbjct: 226 LWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQV 285
Query: 125 VFRC--LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+ L KA ++ +++P ++ TLL + ++ + + M GY
Sbjct: 286 LCDAGRLSDAKAVFWKMKASDQKP--DRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYN 343
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
++ V L ++E + D ++G+ P +Y L+ KA
Sbjct: 344 DNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALEL 403
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
NH+ N ++ + I+ + K +A + M+ + I P++ N ++
Sbjct: 404 FNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAG 463
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + L G PD T+ MI C +A + ++A++ S+MVE G P+ +
Sbjct: 464 SGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLA 523
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
N LI +L G + +LF K++ +I P T+N L+ R K+++ + M
Sbjct: 524 LNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMT 583
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
P+ +Y+ ++ L K+G + A SM + GC PD + N ++ L+++ R E
Sbjct: 584 RTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLE 643
Query: 483 EA 484
EA
Sbjct: 644 EA 645
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 213/473 (45%), Gaps = 40/473 (8%)
Query: 17 IDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGY 76
++ ++S + L ++ MS++ +TYN LI+ + + G EA+ + K M G
Sbjct: 148 VEGGLRSAPVALPVMREAGMSLNA-----YTYNGLIYFLVKSGFDAEAMEVYKAMVEDGI 202
Query: 77 APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFE 136
+P+V TY++L+ F + V V +L M+ R V PN V+ ++
Sbjct: 203 SPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPN----------VY-------SYT 245
Query: 137 LLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLV 196
+ IR L + EA IL KM D G P+ T + L
Sbjct: 246 ICIRV------------------LGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLC 287
Query: 197 TGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVN 256
L++ + KP TY+ L++ +G N + D N+
Sbjct: 288 DAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIV 347
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
SY V+D C+V +D A + EM+++ ++P ++N+LISG K + EL +
Sbjct: 348 SYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHM 407
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
CG P+ +T I+ ++ + A+ M G+ P+ N ++ SL G +
Sbjct: 408 NACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRL 467
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+ R+F +++A +SPD T+ +I+ + +K ++A F M+ G PD + ++L
Sbjct: 468 GMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSL 527
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
I L K G+ +EA Q F +++ P + T N +L L ++G+ +E +++
Sbjct: 528 IDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLE 580
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 125/497 (25%), Positives = 215/497 (43%), Gaps = 39/497 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ YN V+D L K+ ++ A M+ C PD +YN +++G+ + ++EA R+
Sbjct: 589 PNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRM 648
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR-VLEIMKERNVCPNEATVRSLVHGVF 126
QM+ + AP+ T ++ F + E V E + + ++++ SL+ G+
Sbjct: 649 FCQMKKI-LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGIL 707
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ K+ E R L L+ L + A EA + K G ++
Sbjct: 708 KKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTG 767
Query: 187 TFDYTVTCLVTG--LDLNE---------TCG--------ILDTFIK-------------- 213
+++ + LV +D+ E CG ILD K
Sbjct: 768 SYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEM 827
Query: 214 --RGVKPRFSTYLLLMEALYKAGRDVEG-DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
+G + + TY ++ L K+ R + D Y N + + +Y ++D K
Sbjct: 828 HRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYN-LMSEGFSPTPCTYGPLLDGLLKSGK 886
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
M A + EM + PN +N L++GH +L ++E G PD ++
Sbjct: 887 MVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTI 946
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+ID LC A R D L ++ E G+ P+ I YN+LI L + ++ LF +M+
Sbjct: 947 LIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKG 1006
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
I P++YT+N+LI + K +A + + +L G +P F+Y+ALI+ SG D A
Sbjct: 1007 IIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAY 1066
Query: 451 QTFLSMEQNGCNPDSYT 467
+ M GC P+S T
Sbjct: 1067 AAYGQMIVGGCQPNSST 1083
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/497 (22%), Positives = 215/497 (43%), Gaps = 2/497 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P + +I L + + A F +M KPDR TY L+ G
Sbjct: 271 GCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSV 330
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + M GY N+ +YT ++D C RV E V + MKE+ + P + + SL+ G
Sbjct: 331 VEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISG 390
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A EL P + + + +A M +G +P+
Sbjct: 391 FLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPD 450
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + + L L + GV P TY ++++ KA + E + +
Sbjct: 451 VAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFS 510
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + V +V + N +ID K + A ++ ++++ I P T+NTL+SG ++
Sbjct: 511 DMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREG 570
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V + +LL + + P+ T+N+++DCL + A+D L M E G P+ +YN
Sbjct: 571 KVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYN 630
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS-MLT 423
++ L + + R+F +M+ ++PD T ++ SF + +++A +L
Sbjct: 631 TVMYGLIKEERLEEAFRMFCQMK-KILAPDYATLCTILPSFVKNGLMKEALHTVKEYILK 689
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G D S+ +L++ ++K +++ + ++ G + + ++ L + + E
Sbjct: 690 AGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALE 749
Query: 484 AHDIVKTSKERGISFKS 500
AH + K G+S K+
Sbjct: 750 AHQLFNKFKGLGVSLKT 766
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 184/437 (42%), Gaps = 35/437 (8%)
Query: 95 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCN 154
RV ++ +V ++M+++ V N T ++ GV A L E N
Sbjct: 116 RVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYN 175
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
L+Y L + +EA + + M + G P T+ + D++ +L+ R
Sbjct: 176 GLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEAR 235
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRA 274
GVKP +Y + + L +A R E L + +V ++ ++I C + A
Sbjct: 236 GVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDA 295
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ +M+ D P+ VT+ TL+ + E+ ++ G+ + ++ +++D
Sbjct: 296 KAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDA 355
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF----------- 383
LC+ R ++AL EM E G+ P +YN LI R+L LF
Sbjct: 356 LCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPN 415
Query: 384 ------------------------QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
+ M++ I PD+ NA++ S ++ A++ F+
Sbjct: 416 GYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFY 475
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
+ +G+ PD +Y+ +IK K+ + DEA F M ++GC PD N +++TL + G
Sbjct: 476 ELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGG 535
Query: 480 RFEEAHDIVKTSKERGI 496
+ EA + KE I
Sbjct: 536 KGNEAWQLFHKLKEMKI 552
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/495 (23%), Positives = 217/495 (43%), Gaps = 4/495 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P NAV+ +L S + +A F ++ PD TY ++I + DEA
Sbjct: 446 GIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEA 505
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ M G P+V LID + E +++ +KE + P T +L+ G
Sbjct: 506 MNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSG 565
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ R + +LL M R L+ NT+L LS N + A +L M ++G P
Sbjct: 566 LGREGKVKEVMQLL-EEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAP 624
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ S+++ + L+ L E + +K+ + P ++T ++ + K G E +
Sbjct: 625 DLSSYNTVMYGLIKEERLEEAFRMF-CQMKKILAPDYATLCTILPSFVKNGLMKEALHTV 683
Query: 244 N-HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
++ K + +S++ +++ K ++++ E + R I N LI CK
Sbjct: 684 KEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCK 743
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + +L G ++NS+I L + + A D +EM G P+ T
Sbjct: 744 HKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFT 803
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN+++ ++ V L++ ++M T+N +I + ++E+A +++++
Sbjct: 804 YNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLM 863
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ G P +Y L+ L+KSG+ +A+ F M + GC P+ N++L G E
Sbjct: 864 SEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTE 923
Query: 483 EAHDIVKTSKERGIS 497
+ + E+GI+
Sbjct: 924 NVCQLFEKMVEQGIN 938
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 162/360 (45%), Gaps = 35/360 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+S T YN++I LV N ID+A F +M C PD FTYN+++ + + V+E
Sbjct: 760 LGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEE 819
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L++ K+M GY TY +I G +KR+ + + + P T L+
Sbjct: 820 MLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLD 879
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + + K+V +A + +M + G P
Sbjct: 880 GLLK--------------------SGKMV---------------DAENLFNEMLEYGCEP 904
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + + C + + +++G+ P +Y +L++ L AGR +G Y
Sbjct: 905 NCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYF 964
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + L ++ YN++ID K ++ A + EM+ + I PNL T+N+LI K
Sbjct: 965 RQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKA 1024
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + ++ LL G+KP FT+N++I + ++A +M+ G PN+ TY
Sbjct: 1025 GKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTY 1084
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 199/472 (42%), Gaps = 37/472 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P YN V+ L+K ++ A+ F QM PD T ++ + G++ EA
Sbjct: 621 GCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMK-KILAPDYATLCTILPSFVKNGLMKEA 679
Query: 65 LRLVKQ-----------------MEGL----------GYAPNVYTYTILIDGF------- 90
L VK+ MEG+ +A N+ + IL++ F
Sbjct: 680 LHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIR 739
Query: 91 --CNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
C K+ E ++ K V + SL+ G+ A +L
Sbjct: 740 HLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGP 799
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
+ N +L + + E + ++M +GY T++ ++ LV L + +
Sbjct: 800 DEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLY 859
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ G P TY L++ L K+G+ V+ + N + + N YN++++
Sbjct: 860 YNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIA 919
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+ ++ +M ++ I P++ ++ LI C ++ L E G +PD +
Sbjct: 920 GNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVY 979
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N +ID L ++ R E+A+ +EM + G+ PN TYN LI L G A + ++++++
Sbjct: 980 NLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLR 1039
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
P ++T+NALI+ + + A A+ M+ G +P++ +Y L L
Sbjct: 1040 KGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTYMQLPNQL 1091
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 155/331 (46%), Gaps = 4/331 (1%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLV-TGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
A L M + G + T++ + LV +G D E + ++ G+ P TY +LM
Sbjct: 155 APVALPVMREAGMSLNAYTYNGLIYFLVKSGFDA-EAMEVYKAMVEDGISPSVRTYSVLM 213
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVS-NVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
A K RDV+ +L + + R V NV SY + I + D A I +M D
Sbjct: 214 VAFGKK-RDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGC 272
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P++VT +I C + + + + KPD+ T+ +++D + + ++
Sbjct: 273 KPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVE 332
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
+ MV G N ++Y ++ +LC +G V +L +F +M+ +SP+ Y++N+LI F
Sbjct: 333 VWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFL 392
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ + ++A + F M G P+ +++ I KSG+ +A Q + M+ G PD
Sbjct: 393 KADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVA 452
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+N +L +L GR A + K G+S
Sbjct: 453 AANAVLYSLAGSGRLGMAKRVFYELKAMGVS 483
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 164/379 (43%), Gaps = 3/379 (0%)
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV--CNTLLYRLSNNSMASEAAAILRKMG 177
S+VH + DP +A EL R+P CN +L + + + A + M
Sbjct: 70 SVVHMLRSAPDPAEALELFTA-AARQPTKVHTTESCNYMLELMRAHGRVGDMAQVFDLMQ 128
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
+ TF + L L + G+ TY L+ L K+G D
Sbjct: 129 KQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDA 188
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E + +D + +V +Y++++ F K +D + EM R + PN+ ++ I
Sbjct: 189 EAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICI 248
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
+ A + +L + + G KPD T +I LC A R DA +M
Sbjct: 249 RVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQK 308
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P+ +TY L+ GD + ++ M AD + +I ++ A++ + C++ ++++A
Sbjct: 309 PDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAV 368
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F M G+ P+ +SY++LI +K+ FD A + F M G +P+ YT L + +
Sbjct: 369 FDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGK 428
Query: 478 QGRFEEAHDIVKTSKERGI 496
G+ +A + K +GI
Sbjct: 429 SGQSLKAIQRYEHMKSKGI 447
>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 595
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 222/473 (46%), Gaps = 2/473 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S++G+ P+ +N VI+ L + N + M +P T+ +++G+C G
Sbjct: 104 MSYIGVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGN 163
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V +A+R V ++ +GY + YT +I+G C + L+ M+E+N + +
Sbjct: 164 VAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNA 223
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+V G+ + +A++L + + N L++ L N EAA +L M +G
Sbjct: 224 VVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKG 283
Query: 181 YLPESSTFDYTVT-CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
+P+ TF+ L TG+ ++ I G++ TY ++ + +
Sbjct: 284 IMPDVQTFNVIGGRFLKTGM-ISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDA 342
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + + + N+ +Y +I +C++ M++A EM + + PN+VT+NTLI G
Sbjct: 343 MEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGG 402
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
CK + +EL ++ + G PD T ++D L + H +A+ E+ + +
Sbjct: 403 FCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLD 462
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
I Y+I++ +C+ G + +L LF + + + D+ T+N +I C+ ++ AE
Sbjct: 463 IIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLM 522
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
M G PD +Y+ ++ L++ ++ + + M+ G ++ T+ L++
Sbjct: 523 KMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLI 575
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/492 (22%), Positives = 227/492 (46%), Gaps = 8/492 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P + +N + + K A + MS KP+ T+NI+I+ +CR+ +
Sbjct: 76 PCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGFSV 135
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ M +G P++ T+T +++G C VA+ R ++ +K+ + T ++++G+ +
Sbjct: 136 LGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCK 195
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
A L + E+ N ++ L + M EA + +M +G P+ T
Sbjct: 196 VGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFT 255
Query: 188 FDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ CL+ GL E +L +++G+ P T+ ++ K G
Sbjct: 256 YN----CLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIF 311
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + +V +Y+ +I C +N M A E+ M + PN+VT+ +LI G C+
Sbjct: 312 SFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEI 371
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++K L ++ G P+ T+N++I C+A + A + M + G P+ T
Sbjct: 372 KNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTC 431
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
I++ L + ++ LF++++ DI ++ ++ C K+ A + F + +
Sbjct: 432 AIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSS 491
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G++ D +Y+ +I L K G D+A+ + ME+NGC PD T N+ ++ L+++ +
Sbjct: 492 KGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISK 551
Query: 484 AHDIVKTSKERG 495
+ + K +G
Sbjct: 552 STKYLMFMKGKG 563
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 186/408 (45%), Gaps = 9/408 (2%)
Query: 15 AVIDALVK--SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
A+I+ L K +S L+YLK +M C D YN ++ G+C+ G+V EA L QM
Sbjct: 188 AIINGLCKVGHSSAALSYLK--KMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMT 245
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G G P+++TY LI G CN R E +L M + + P+ T +++ G F
Sbjct: 246 GKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTF-NVIGGRFLKTGMI 304
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSN--NSMASEAAAILRKMGDRGYLPESSTFDY 190
+ + FM + +V + + + N M +A + M +G LP T+
Sbjct: 305 SRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQM-KDAMEVFDLMIRKGCLPNIVTYTS 363
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ ++N+ L + G+ P T+ L+ KAG+ V + K
Sbjct: 364 LIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHG 423
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+ ++ + +++D K + A + RE+ + +++ ++ +++G C +++
Sbjct: 424 QLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDAL 483
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
EL L G K D T+N MI+ LC+ +DA D L +M E G PP+ TYN+ ++ L
Sbjct: 484 ELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGL 543
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
++++S + M+ + T LI F NK +A + F
Sbjct: 544 LRRYEISKSTKYLMFMKGKGFRANATTTKLLINYF-SANKENRAFQVF 590
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 212/488 (43%), Gaps = 51/488 (10%)
Query: 17 IDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGY 76
+D+L S+D+A + +M + P +N+L + ++ A+ L+K M +G
Sbjct: 50 LDSLRNVKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGV 109
Query: 77 APNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFE 136
PNV T+ I+I+ C F VL +M + V P+ T ++V+G+ C++ + A
Sbjct: 110 KPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGL--CVEGNVA-- 165
Query: 137 LLIRFM--------EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
IRF+ E + T+ + N L +S A + L+KM ++
Sbjct: 166 QAIRFVDHLKDMGYESDRYTRGAIINGL----CKVGHSSAALSYLKKMEEQN-------- 213
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
LD+ ++D K G+ F + L + G+ ++ D +
Sbjct: 214 --------CNLDVTAYNAVVDGLCKDGM--VFEAWDLFSQM---TGKGIQPDLF------ 254
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+YN +I C + A + M + I P++ TFN + K + +
Sbjct: 255 --------TYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISR 306
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+ + + G + D T++S+I C ++ +DA++ M+ G PN +TY LI
Sbjct: 307 AKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIH 366
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
C I ++ +++ +M + + P+I T+N LI FC+ K A++ FF M G P
Sbjct: 367 GWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLP 426
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
D + + ++ L K EA F +E+ + D ++IL + G+ +A ++
Sbjct: 427 DLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELF 486
Query: 489 KTSKERGI 496
+G+
Sbjct: 487 SYLSSKGV 494
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 122/282 (43%), Gaps = 11/282 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ +GI Y+++I N + A F M C P+ TY LIHG C I
Sbjct: 314 MGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKN 373
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++A+ + +M G PN+ T+ LI GFC A + + +M + P+ T
Sbjct: 374 MNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAI 433
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS-----EAAAILRK 175
++ G+F+C H E + F E E + L + ++Y + N M S +A +
Sbjct: 434 ILDGLFKC---HFHSEAMSLFRELEKMNSDL--DIIIYSIILNGMCSSGKLNDALELFSY 488
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
+ +G + T++ + L L++ +L + G P TY + ++ L +
Sbjct: 489 LSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYE 548
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEI 277
+ +YL + +N + ++I+ F N +RA ++
Sbjct: 549 ISKSTKYLMFMKGKGFRANATTTKLLINYF-SANKENRAFQV 589
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ YN +I+ L K +D A +M + C PD TYN+ + G+ R + ++
Sbjct: 493 GVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKS 552
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAK--RVAEVF 100
+ + M+G G+ N T +LI+ F K R +VF
Sbjct: 553 TKYLMFMKGKGFRANATTTKLLINYFSANKENRAFQVF 590
>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 819
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 215/486 (44%), Gaps = 6/486 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P +YN++I+A ++ A M P R TYN +++ G +AL L
Sbjct: 186 PDADIYNSLINAHARAGLWRWAINIMDDMLRAAIPPSRATYNNVVNACGAAGNWKKALEL 245
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
K+M G P++ T+ I++ F N + + E+MK N+ P+ T+ ++H + +
Sbjct: 246 CKKMIRNGVGPDLVTHNIVLSAFKNGFQYTKATGYFEMMKGANIAPDTFTLNIVIHCLVK 305
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCN--TLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
A +LL E+ V ++++ A+ M G P
Sbjct: 306 VGQHGDAVDLLNSMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNI 365
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+++ + + E GI + G++P +Y L+ A ++ + + N
Sbjct: 366 VSYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNE 425
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS--GHCKD 303
+ K+ N SYN +ID + M A + EM I P++V+ +TL++ G C+
Sbjct: 426 MRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLAACGRCR- 484
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ K +L G + + +NS I +E AL + M+ V P+ +TY
Sbjct: 485 -QTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKLYATMMASNVNPDAVTY 543
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NILI LC +G A SL+ F+ M RI +++LI S+ + +K+ +AE F +M
Sbjct: 544 NILISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQDKLAEAESTFINMKA 603
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G PD +Y+A+I+A G + F ME N PD+ + ++E L + ++
Sbjct: 604 SGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKEMEGNAILPDAIICSSLMEALNKGNQYGR 663
Query: 484 AHDIVK 489
++K
Sbjct: 664 VLQLMK 669
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/486 (22%), Positives = 212/486 (43%), Gaps = 37/486 (7%)
Query: 48 YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
Y ++I R VD+A L +M+ P+ Y LI+ A +++ M
Sbjct: 156 YGMMIQLHARHNQVDQARGLFFEMQEWRCKPDADIYNSLINAHARAGLWRWAINIMDDML 215
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
+ P+ AT ++V+ + KA EL + + + N +L N +
Sbjct: 216 RAAIPPSRATYNNVVNACGAAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAFKNGFQYT 275
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVK--PRFSTYLL 225
+A M P++ T + + CLV + +L++ ++ V+ P TY
Sbjct: 276 KATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTS 335
Query: 226 LMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRD 285
++ + Y G+ + + + + N+ SYN ++ + M A I + ++
Sbjct: 336 IIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQNG 395
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
+ P++V++ TL++ + + A+ K RE+ + + KP+K ++N++ID A F++A+
Sbjct: 396 LRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAI 455
Query: 346 DCLSEMVEWGVPP-----------------------------------NTITYNILIRSL 370
L EM + G+PP N + YN I S
Sbjct: 456 SLLHEMEKDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSY 515
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
+ GD ++L+L+ M A ++PD T+N LI C++ K ++ K F M+ L +
Sbjct: 516 LSFGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTK 575
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
YS+LI + +K + EA+ TF++M+ +GC PD T +++ G + D+ K
Sbjct: 576 EVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKE 635
Query: 491 SKERGI 496
+ I
Sbjct: 636 MEGNAI 641
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 179/449 (39%), Gaps = 37/449 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P +N V+ A A F+ M PD FT NI+IH + ++G +A
Sbjct: 253 GVGPDLVTHNIVLSAFKNGFQYTKATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDA 312
Query: 65 LRLVKQM--EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+ L+ M + + +P+V TYT +I + +V V ++M V PN +
Sbjct: 313 VDLLNSMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSY---- 368
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
N LL +++ M +EA I + + G
Sbjct: 369 -------------------------------NALLGAYASHGMHTEAFGIFKLLKQNGLR 397
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ ++ + + + + K KP +Y L++A AG E
Sbjct: 398 PDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISL 457
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L+ + KD + +V S + ++ + + + + R I N+V +N+ I +
Sbjct: 458 LHEMEKDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLS 517
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ K +L ++ PD T+N +I LC+ ++ ++L +MV+ +P
Sbjct: 518 FGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEV 577
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y+ LI S +A + F M+A PD+ T+ A+IQ++ F M
Sbjct: 578 YSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKEME 637
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
+ PD S+L++AL K ++ Q
Sbjct: 638 GNAILPDAIICSSLMEALNKGNQYGRVLQ 666
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/471 (19%), Positives = 190/471 (40%), Gaps = 10/471 (2%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP Y ++I + ++ F M + KP+ +YN L+ G+ EA
Sbjct: 327 SPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFG 386
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+ K ++ G P+V +YT L++ + + + + V M++ + PN+ + +L+
Sbjct: 387 IFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYG 446
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+A LL ME++ + +V +TLL ++ +L RG
Sbjct: 447 SAGMFKEAISLL-HEMEKDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNI 505
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
++ + ++ D + + T + V P TY +L+ L K G+ E ++
Sbjct: 506 VAYNSGIGSYLSFGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFED 565
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ R+ Y+ +I + K + + A M+ P+++T+ +I +
Sbjct: 566 MVDLRIPLTKEVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGS 625
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+L + PD +S+++ L + +++ L + M + + N Y
Sbjct: 626 WTSVWDLFKEMEGNAILPDAIICSSLMEALNKGNQYGRVLQLMKFMHDQCIQLNQKAYFE 685
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML--- 422
+I S + D + + + + + S + N L+ + K E K F+ M+
Sbjct: 686 IIASCSMLRDWKTASEIIEHLDSSLPSISVGKLNYLLNFLGKCGKTESMMKLFYKMVSSC 745
Query: 423 -TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
T+GL +Y L++ L+ G++ + + ME G P Y +L
Sbjct: 746 STVGLS----TYKVLLRNLLAVGKWRKYVEVLQWMEDAGVRPTLYMYQNVL 792
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 163/418 (38%), Gaps = 20/418 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y +++A +S + A F +M + CKP++ +YN LI G+ EA
Sbjct: 395 GLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEA 454
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +ME G P+V + + L+ ++ ++ VLE K R + N S +
Sbjct: 455 ISLLHEMEKDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGS 514
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
D KA +L M + N L+ L +E+ M D
Sbjct: 515 YLSFGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLT 574
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG---------R 235
+ + V L E G P TY +++A G +
Sbjct: 575 KEVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFK 634
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
++EG N + D ++ + +++ K N R ++ + M D+ I N +
Sbjct: 635 EMEG----NAILPDAIICSS-----LMEALNKGNQYGRVLQLMKFMHDQCIQLNQKAYFE 685
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKF-TFNSMIDCLCRAHRFEDALDCLSEMVEW 354
+I+ C KT ++ L+ N +++ L + + E + +MV
Sbjct: 686 IIAS-CSMLRDWKTASEIIEHLDSSLPSISVGKLNYLLNFLGKCGKTESMMKLFYKMVSS 744
Query: 355 GVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
TY +L+R+L A+G + + + Q M+ + P +Y + ++ R N ++
Sbjct: 745 CSTVGLSTYKVLLRNLLAVGKWRKYVEVLQWMEDAGVRPTLYMYQNVLPYIWRDNSMD 802
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 119/306 (38%), Gaps = 10/306 (3%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F GI + YN+ I + + + A + M PD TYNILI G+C++G
Sbjct: 498 FRGIELNIVAYNSGIGSYLSFGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYA 557
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
E+L+ + M L Y+ LI + ++AE MK P+ T +++
Sbjct: 558 ESLKFFEDMVDLRIPLTKEVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMI 617
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG-Y 181
++L L ++C++L+ L+ + +++ M D+
Sbjct: 618 QAYTDHGSWTSVWDLFKEMEGNAILPDAIICSSLMEALNKGNQYGRVLQLMKFMHDQCIQ 677
Query: 182 LPESSTFDYTVTC--LVTGLDLNETCGILDTFIKRGVKPRFSTYLL--LMEALYKAGRDV 237
L + + F+ +C L +E LD+ + P S L L+ L K G+
Sbjct: 678 LNQKAYFEIIASCSMLRDWKTASEIIEHLDSSL-----PSISVGKLNYLLNFLGKCGKTE 732
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ + +++Y +++ V + E+ + M D + P L + ++
Sbjct: 733 SMMKLFYKMVSSCSTVGLSTYKVLLRNLLAVGKWRKYVEVLQWMEDAGVRPTLYMYQNVL 792
Query: 298 SGHCKD 303
+D
Sbjct: 793 PYIWRD 798
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%)
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y ++I+ V ++ LF +MQ R PD +N+LI + R A ML
Sbjct: 156 YGMMIQLHARHNQVDQARGLFFEMQEWRCKPDADIYNSLINAHARAGLWRWAINIMDDML 215
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ P +Y+ ++ A +G + +A + M +NG PD T N++L ++
Sbjct: 216 RAAIPPSRATYNNVVNACGAAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAFKNGFQYT 275
Query: 483 EAHDIVKTSKERGISFKSF 501
+A + K I+ +F
Sbjct: 276 KATGYFEMMKGANIAPDTF 294
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 111/482 (23%), Positives = 221/482 (45%), Gaps = 10/482 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P N++++ LV +++A + +M D +T I+ G+C+ G V+E L
Sbjct: 165 PDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHL 224
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH---- 123
+++ G G PN+ Y LIDG+C + + + +K + P T ++++
Sbjct: 225 IEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCK 284
Query: 124 -GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G F +D +LL+ ER + N ++ + EAA +R M + G
Sbjct: 285 KGKFEAVD-----KLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCE 339
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P+ +T++ + + + E +L+ I+RG+ P +Y L+ A K G V
Sbjct: 340 PDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASEL 399
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
L + + ++ +Y ++ +D A + +M +R I P+ +N L+SG CK
Sbjct: 400 LIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCK 459
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++LLV +L+ PD F +++D R ++A +E G+ + +
Sbjct: 460 KGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVE 519
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
N +I+ C G + +L F++M SPD +T++ +I + + N + A + F ML
Sbjct: 520 CNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLML 579
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+P+ ++++LI ++G + A++ F M G P+ T +++ ++G+
Sbjct: 580 KKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLT 639
Query: 483 EA 484
+A
Sbjct: 640 KA 641
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 127/530 (23%), Positives = 225/530 (42%), Gaps = 46/530 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN +ID K+ I+ A L F+++ V P TY +I+ C+ G +
Sbjct: 232 GCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAV 291
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L+ +M+ G A ++ + +ID E + M E P+ AT +L++G
Sbjct: 292 DKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLING 351
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+A ELL + R K L++ S N A+ +L +M +RG+ +
Sbjct: 352 SCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLD 411
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR--------- 235
+ V LV +++ + D ++RG+ P + Y +LM L K GR
Sbjct: 412 LIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLV 471
Query: 236 -----DVEGDRYLNHVFKDRLVSNVN---------------------SYNMVIDCFCKVN 269
+V D ++N D + + N N +I +CK
Sbjct: 472 EMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYG 531
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
MM+ A + M + +P+ T++T+I G+ K ++ + ++L+ KP+ TF
Sbjct: 532 MMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFT 591
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
S+I+ CR A EM +G PN +TY ILI C G + ++ F++M +
Sbjct: 592 SLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLIN 651
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEK----------AFFSML-TLGLRPDNFSYSALIK 438
+ P+ TFN L+ N I + K FF M+ + G +Y++++
Sbjct: 652 KCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILL 711
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
L + A Q M G PD + +L L +GR ++ ++++
Sbjct: 712 CLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDWNNVI 761
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 192/436 (44%), Gaps = 20/436 (4%)
Query: 76 YAPNVYTYTILIDGF-CNA--------KRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+A T + +DGF C++ + E+ +LE MK + + P + ++
Sbjct: 83 WASKQSTLSNSLDGFVCSSLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYA 142
Query: 127 RCLDPHKAFELLIRFME-REPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+A EL ++ + CN+LL L ++ A + +M DR
Sbjct: 143 GSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDR----NG 198
Query: 186 STFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+YTV + GL + E +++ +G P Y L++ K G D+E
Sbjct: 199 DVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNG-DIERAN 257
Query: 242 YLNHVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L K + + V +Y +I+ FCK + ++ EM++R +A +L FN +I
Sbjct: 258 LLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDAR 317
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
K + + + ++E G +PD T+N++I+ C + +A + L + G+ PN
Sbjct: 318 FKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNK 377
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+Y LI + G+ R+ L +M + D+ + AL+ +++ A
Sbjct: 378 FSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDK 437
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ G+ PD Y+ L+ L K GRF AKQ + M PD++ + +++ ++ G
Sbjct: 438 MMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGN 497
Query: 481 FEEAHDIVKTSKERGI 496
+EA + + + ERGI
Sbjct: 498 LDEAKKLFQLTIERGI 513
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 136/295 (46%)
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+ D + R T ++ + L K G+ EG + + V N+ YN +ID +C
Sbjct: 189 VYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYC 248
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
K ++RA + +E++ + P + T+ +I+ CK + +LLV + E G
Sbjct: 249 KNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQ 308
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
FN +ID + +A D + M+E G P+ TYN LI C+ G V + L +
Sbjct: 309 IFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHA 368
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ P+ +++ LI +F + + +A + M G D +Y AL+ L+ +G
Sbjct: 369 IRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEV 428
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
D A M + G PD+ N+++ L ++GRF A ++ ++ ++ +F
Sbjct: 429 DVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAF 483
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 2/149 (1%)
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P+ N L+ L G V + +++ +M D YT + + C+ K+E+
Sbjct: 165 PDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHL 224
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
G P+ Y+ LI K+G + A F ++ G P T ++ +
Sbjct: 225 IEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCK 284
Query: 478 QGRFEEAHDIVKTSKERG--ISFKSFPGL 504
+G+FE ++ KERG +S + F G+
Sbjct: 285 KGKFEAVDKLLVEMKERGLAVSLQIFNGI 313
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.139 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,192,708,369
Number of Sequences: 23463169
Number of extensions: 278992458
Number of successful extensions: 1061805
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7727
Number of HSP's successfully gapped in prelim test: 4793
Number of HSP's that attempted gapping in prelim test: 806003
Number of HSP's gapped (non-prelim): 101962
length of query: 504
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 357
effective length of database: 8,910,109,524
effective search space: 3180909100068
effective search space used: 3180909100068
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 79 (35.0 bits)