BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048258
(504 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LSQ2|PP239_ARATH Putative pentatricopeptide repeat-containing protein At3g16890,
mitochondrial OS=Arabidopsis thaliana GN=PPR40 PE=3 SV=1
Length = 659
Score = 587 bits (1514), Expect = e-167, Method: Compositional matrix adjust.
Identities = 282/473 (59%), Positives = 356/473 (75%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
ISFLG+ PSTRLYNAVIDALVKSNS+DLAYLKFQQM D CKPDRFTYNILIHG+C+ GV
Sbjct: 171 ISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGV 230
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VDEA+RLVKQME G PNV+TYTILIDGF A RV E + LE+M+ R + PNEAT+R+
Sbjct: 231 VDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRT 290
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
VHG+FRCL P KAFE+L+ FME++ Q++ + +LY LSNNSMA E LRK+G+RG
Sbjct: 291 FVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERG 350
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
Y+P+SSTF+ ++CL+ G DL ETC I D F+ RGVKP F+ YL+L++AL A R EGD
Sbjct: 351 YIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGD 410
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
RYL + D L+S+V SYN VIDC CK ++ A EM+DR I+PNLVTFNT +SG+
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+V K +L LL GFKPD TF+ +I+CLCRA +DA DC EM+EWG+ PN
Sbjct: 471 SVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNE 530
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITYNILIRS C+ GD RS++LF KM+ + +SPD+Y +NA IQSFC+M K++KAE+ +
Sbjct: 531 ITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKT 590
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILE 473
ML +GL+PDNF+YS LIKAL +SGR EA++ F S+E++GC PDSYT L+ E
Sbjct: 591 MLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEE 643
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 196/469 (41%), Gaps = 35/469 (7%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F Q+S KP YN +I + + +D A +QM G P+ +TY ILI G C
Sbjct: 168 FAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCK 227
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
V E R+++ M++ PN T L+ G +A + L R+ +
Sbjct: 228 KGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEAT 287
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
T ++ + +A +L ++ + +D + CL ET L
Sbjct: 288 IRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIG 347
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+RG P ST+ M L K VE R + D F
Sbjct: 348 ERGYIPDSSTFNAAMSCLLKGHDLVETCR-------------------IFDGFV------ 382
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
R + P + L+ + L + G +++N++I
Sbjct: 383 ----------SRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVI 432
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
DCLC+A R E+A L+EM + G+ PN +T+N + GDV + + +K+
Sbjct: 433 DCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFK 492
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PD+ TF+ +I CR +I+ A F ML G+ P+ +Y+ LI++ +G D + +
Sbjct: 493 PDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKL 552
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
F M++NG +PD Y N +++ + + ++A +++KT G+ +F
Sbjct: 553 FAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNF 601
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 70/141 (49%)
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
+++ L E+ + G + +LI S +G +F ++ + P +NA+I
Sbjct: 129 SMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVID 188
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ + N ++ A F M + G +PD F+Y+ LI + K G DEA + MEQ G P
Sbjct: 189 ALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRP 248
Query: 464 DSYTSNLILETLVQQGRFEEA 484
+ +T ++++ + GR +EA
Sbjct: 249 NVFTYTILIDGFLIAGRVDEA 269
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 245 bits (625), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 139/485 (28%), Positives = 245/485 (50%), Gaps = 1/485 (0%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
YN ++++L + +D + +M D+ P+ +TYN +++G C++G V+EA + V ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G P+ +TYT LI G+C K + F+V M + NE L+HG+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+A +L ++ + E L+ L + SEA ++++M + G P T+ +
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
L + + +L +++G+ P TY L+ K G + + + +L
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
N +YN +I +CK N+ +A + +M +R + P++VT+N+LI G C+ L
Sbjct: 426 PNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCA 372
L ++ + G PD++T+ SMID LC++ R E+A D + + GV PN + Y LI C
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 373 IGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS 432
G V + + +KM + P+ TFNALI C K+++A M+ +GL+P +
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604
Query: 433 YSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSK 492
+ LI L+K G FD A F M +G PD++T ++T ++GR +A D++ +
Sbjct: 605 DTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR 664
Query: 493 ERGIS 497
E G+S
Sbjct: 665 ENGVS 669
Score = 208 bits (530), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 222/463 (47%), Gaps = 1/463 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++I + +D A+ F +M + C+ + Y LIHG+C +DEA
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +M+ P V TYT+LI C ++R +E +++ M+E + PN T L+
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KA ELL + +E+ + + N L+ M +A ++ M R P
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + ++++ G+L+ ++R V P TY L++ ++G R L+
Sbjct: 428 TRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ LV + +Y +ID CK ++ A ++ + + + PN+V + LI G+CK
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V + +L +L P+ TFN++I LC + ++A +MV+ G+ P T
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
ILI L GD + FQ+M + PD +T+ IQ++CR ++ AE M
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYT 467
G+ PD F+YS+LIK G+ + A M GC P +T
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHT 709
Score = 188 bits (478), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 221/500 (44%), Gaps = 20/500 (4%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ R Y +I +L S A ++M KP+ TY +LI +C ++A L
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ QM G PNV TY LI+G+C + + V+E+M+ R + PN T L+ G +
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+ HKA +L + +ER+ L + N+L+ + A +L M DRG +P+ T
Sbjct: 441 S-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ + L + E C + D+ ++GV P Y L++ KAG+ E L +
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ N ++N +I C + AT + +M + P + T LI KD +
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+L G KPD T+ + I CR R DA D +++M E GV P+ TY+ LI
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM--NKIEKAEKAFFSMLTL- 424
+ +G + + ++M+ P +TF +LI+ M K + +E +M +
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM 739
Query: 425 ---------------GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN-GCNPDSYTS 468
+ P+ SY LI + + G A++ F M++N G +P
Sbjct: 740 EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF 799
Query: 469 NLILETLVQQGRFEEAHDIV 488
N +L + + EA +V
Sbjct: 800 NALLSCCCKLKKHNEAAKVV 819
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 230/496 (46%), Gaps = 19/496 (3%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+SP+TR YN +I KSN + A +M + PD TYN LI G CR G D A
Sbjct: 424 LSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
RL+ M G P+ +TYT +ID C +KRV E + + ++++ V PN +L+ G
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ +A +L + + + L L N L++ L + EA + KM G P
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
ST + L+ D + + G KP TY ++ + GR ++ + +
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++ + ++ +Y+ +I + + + A ++ + MRD P+ TF +LI H + +
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK-HLLEMK 721
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
K + G +P+ ++M++ F+ ++ L +MVE V PN +Y
Sbjct: 722 YGKQK---------GSEPELCAMSNMME-------FDTVVELLEKMVEHSVTPNAKSYEK 765
Query: 366 LIRSLCAIGDVARSLRLFQKMQADR-ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI +C +G++ + ++F MQ + ISP FNAL+ C++ K +A K M+ +
Sbjct: 766 LILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICV 825
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G P S LI L K G + F ++ Q G D +I++ + +QG E
Sbjct: 826 GHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAF 885
Query: 485 HDIVKTSKERGISFKS 500
+++ ++ G F S
Sbjct: 886 YELFNVMEKNGCKFSS 901
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 201/424 (47%), Gaps = 15/424 (3%)
Query: 76 YAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAF 135
Y +VY+Y L+ N V VF++ +M + +A V + R ++ + F
Sbjct: 119 YKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALY---VLDLCRKMNKDERF 175
Query: 136 ELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
EL + + + C NTLL L+ + E + +M + P T++ V
Sbjct: 176 ELKYKLI--------IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNG 227
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD-RYLNHVFKDRLVS 253
++ E + ++ G+ P F TY L+ Y +D++ + N +
Sbjct: 228 YCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMG-YCQRKDLDSAFKVFNEMPLKGCRR 286
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
N +Y +I C +D A ++ +M+D + P + T+ LI C + L+
Sbjct: 287 NEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLV 346
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ E G KP+ T+ +ID LC +FE A + L +M+E G+ PN ITYN LI C
Sbjct: 347 KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKR 406
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G + ++ + + M++ ++SP+ T+N LI+ +C+ N + KA ML + PD +Y
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTY 465
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
++LI +SG FD A + M G PD +T ++++L + R EEA D+ + ++
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 494 RGIS 497
+G++
Sbjct: 526 KGVN 529
Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 163/384 (42%), Gaps = 19/384 (4%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ +Y A+ID K+ +D A+L ++M C P+ T+N LIHG+C G + EA
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++M +G P V T TILI + + M P+ T + +
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQT 646
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R A +++ + E ++L+ + + A +L++M D G P
Sbjct: 647 YCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPS 706
Query: 185 SSTF------------------DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
TF + + + ++ + +L+ ++ V P +Y L
Sbjct: 707 QHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKL 766
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVN-SYNMVIDCFCKVNMMDRATEICREMRDRD 285
+ + + G ++ +H+ ++ +S +N ++ C CK+ + A ++ +M
Sbjct: 767 ILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVG 826
Query: 286 IAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL 345
P L + LI G K E + + LL+CG+ D+ + +ID + + E
Sbjct: 827 HLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFY 886
Query: 346 DCLSEMVEWGVPPNTITYNILIRS 369
+ + M + G ++ TY++LI
Sbjct: 887 ELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 145/523 (27%), Positives = 260/523 (49%), Gaps = 35/523 (6%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ A+ K N DL ++M + D ++YNILI+ CR + AL +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P++ T + L++G+C+ KR++E +++ M PN T +L+HG+F
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 128 CLDPHKAFELLIRFMER--EP--LTQKLVCNTLLYR------------------------ 159
+A L+ R + R +P T V N L R
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 160 -------LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
L N ++A + +M ++G P T++ + CL ++ +L I
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+R + P T+ L++A K G+ VE ++ + + K + ++ +Y+ +I+ FC + +D
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + M +D PN+VT+NTLI G CK V + EL + + G + T+N++I
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
L +A + A +MV GVPP+ ITY+IL+ LC G + ++L +F+ +Q ++
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PDIYT+N +I+ C+ K+E F S+ G++P+ Y+ +I + G +EA
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
F M+++G P+S T N ++ ++ G + +++K + G
Sbjct: 558 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 182/407 (44%), Gaps = 3/407 (0%)
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATV---RSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
AKR A++ + + R V + A+ L V L A +L ++ PL
Sbjct: 20 AKRFAQLRKASPLFSLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPS 79
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ N LL ++ + ++ +M + + +++ + C L +L
Sbjct: 80 IVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLG 139
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
+K G +P T L+ R E ++ +F N ++N +I N
Sbjct: 140 KMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHN 199
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
A + M R P+L T+ T+++G CK ++ LL + + + D +
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++ID LC DAL+ +EM G+ PN +TYN LIR LC G + + RL M
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
+I+P++ TF+ALI +F + K+ +AEK + M+ + PD F+YS+LI R DEA
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
K F M C P+ T N +++ + R EE ++ + +RG+
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Score = 152 bits (383), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 160/328 (48%)
Query: 169 AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLME 228
A A+L KM GY P+ T + G ++E ++D +P T+ L+
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 193
Query: 229 ALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
L+ + E ++ + ++ +Y V++ CK +D A + ++M I
Sbjct: 194 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
++V + T+I C V+ L + G +P+ T+NS+I CLC R+ DA L
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
S+M+E + PN +T++ LI + G + + +L+ +M I PDI+T+++LI FC
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+++++A+ F M++ P+ +Y+ LIK K+ R +E + F M Q G ++ T
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGI 496
N +++ L Q G + A I K G+
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 151/344 (43%), Gaps = 35/344 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P+ ++A+IDA VK + A + +M PD FTY+ LI+G C +DEA
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ + M PNV TY LI GFC AKRV E + M +R + N T +L+ G+
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
F+ D C+ A I +KM G P+
Sbjct: 441 FQAGD----------------------CDM-------------AQKIFKKMVSDGVPPDI 465
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + L L + + + K ++P TY +++E + KAG+ +G
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + NV Y +I FC+ + + A + REM++ PN T+NTLI +D +
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+ EL+ + CGF D T + +I+ L + L+ LS
Sbjct: 586 KAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEMLS 629
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 42/88 (47%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P+ +Y +I + + A F++M D P+ TYN LI R G
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID 88
+ L+K+M G+ + T +++I+
Sbjct: 586 KAASAELIKEMRSCGFVGDASTISMVIN 613
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 231 bits (589), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 251/489 (51%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ LG+S + YN +I+ L + + + A +M P T N L++G C
Sbjct: 91 MEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 150
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ EA+ LV QM +GY P+ T+T L+ G + +E ++E M + P+ T +
Sbjct: 151 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+++G+ + +P A LL + + + ++ +T++ L +A + +M ++G
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ T+ ++CL ++ +L ++R + P T+ L++A K G+ +E +
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + + + + N+ +YN +I+ FC + +D A +I M +D P++VT+NTLI+G
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK +V EL + G + T+ ++I +A ++A +MV GV PN
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TYN L+ LC G + +++ +F+ +Q ++ PDIYT+N + + C+ K+E F S
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+ G++PD +Y+ +I K G +EA F+ M+++G PDS T N ++ ++ G
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Query: 481 FEEAHDIVK 489
+ +++K
Sbjct: 571 KAASAELIK 579
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 227/471 (48%)
Query: 26 IDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTI 85
+D A F +M + P ++ L+ I ++ D + ++ME LG + N+YTY I
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
+I+ C +++ +L M + P+ T+ SL++G +A L+ + +E
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
+ TL++ L ++ ASEA A++ +M +G P+ T+ + L + +
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
+L+ K ++ Y ++++L K + + + +V +Y+ +I C
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C A+ + +M +R I PN+VTFN+LI K+ ++ + +L +++ P+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
T+NS+I+ C R ++A + MV P+ +TYN LI C V + LF+
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M + + T+ LI F + + + A+ F M++ G+ P+ +Y+ L+ L K+G+
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++A F ++++ PD YT N++ E + + G+ E+ D+ + +G+
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV 516
Score = 162 bits (409), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 186/410 (45%), Gaps = 1/410 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y AVI+ L K DLA +M + + D Y+ +I +C+ VD+A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M+ G P+V+TY+ LI CN R ++ R+L M ER + PN T SL+
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +L ++R + N+L+ + EA I M + LP+
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + + + +RG+ TY L+ ++A
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D + N+ +YN ++D CK +++A + ++ + P++ T+N + G CK
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V +L L G KPD +N+MI C+ E+A +M E G P++ TYN
Sbjct: 500 KVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYN 559
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKA 414
LIR+ GD A S L ++M++ R + D T+ L+ +++K
Sbjct: 560 TLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKG 608
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 148/344 (43%), Gaps = 35/344 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P+ +N++IDA K + A F +M P+ TYN LI+G C +DEA
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
++ M P+V TY LI+GFC AK+V + + M R + N T +L+HG
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
F+ D C+ A + ++M G P
Sbjct: 426 FQASD----------------------CDN-------------AQMVFKQMVSDGVHPNI 450
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + L L + + + K ++P TY ++ E + KAG+ +G
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + +V +YN +I FCK + + A + +M++ P+ T+NTLI H +D +
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+ EL+ + C F D T+ + D L + L+ LS
Sbjct: 571 KAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLEVLS 614
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 73/156 (46%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ ++A+D EMV+ P+ + ++ L+ ++ + + +KM+ +S ++YT+N
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
+I CR +++ A M+ LG P + ++L+ R EA M +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G PD+ T ++ L Q + EA +V+ +G
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 200
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P YN +I K + AY F +M D PD TYN LI R G
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID 88
+ L+K+M +A + TY ++ D
Sbjct: 571 KAASAELIKEMRSCRFAGDASTYGLVTD 598
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 254/494 (51%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGIS Y+ I+ + + + LA +M +PD T + L++G C + +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ LV QM +GY P+ +T+T LI G + +E +++ M +R P+ T ++V+
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + D A LL + + + ++ NT++ L +A + +M ++G P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ ++CL ++ +L I+R + P T+ L++A K G+ VE ++
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K + ++ +Y+ +I+ FC + +D A + M +D PN+VT++TLI G CK
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V + EL + + G + T+ ++I +A ++A +MV GV PN +TY
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NIL+ LC G +A+++ +F+ +Q + PDIYT+N +I+ C+ K+E + F ++
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G+ P+ +Y+ +I + G +EA M+++G P+S T N ++ ++ G E
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREA 591
Query: 484 AHDIVKTSKERGIS 497
+ +++K + G +
Sbjct: 592 SAELIKEMRSCGFA 605
Score = 175 bits (444), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 131/537 (24%), Positives = 240/537 (44%), Gaps = 84/537 (15%)
Query: 2 SFLGISPSTR--LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
SF S R L N + D + +++DL F M + P +N L+ + ++
Sbjct: 42 SFASASGDYREILRNRLSDIIKVDDAVDL----FGDMVKSRPFPSIVEFNKLLSAVAKMN 97
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+ + L +QM+ LG + ++YTY+I I+ FC +++ VL M + P+ T+
Sbjct: 98 KFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS 157
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
SL++G C++ S+A A++ +M +
Sbjct: 158 SLLNGY---------------------------CHS--------KRISDAVALVDQMVEM 182
Query: 180 GYLPESSTFDYTVTCLVTGLDLN----ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
GY P++ TF T L+ GL L+ E ++D ++RG +P TY ++ L K G
Sbjct: 183 GYKPDTFTF----TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR------------- 282
L + K ++ ++V YN +ID CK MD A + EM
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 283 ----------------------DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
+R I PN+VTF+ LI K+ ++ + +L +++
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
PD FT++S+I+ C R ++A M+ PN +TY+ LI+ C V +
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
LF++M + + T+ LI F + + A+ F M+++G+ P+ +Y+ L+ L
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
K+G+ +A F ++++ PD YT N+++E + + G+ E+ ++ +G+S
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS 535
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 152/344 (44%), Gaps = 35/344 (10%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I+P+ ++A+IDA VK + A + +M PD FTY+ LI+G C +DEA
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ + M PNV TY+ LI GFC AKRV E + M +R + N T +L+HG
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
F+ D C+ A + ++M G P
Sbjct: 444 FQARD----------------------CDN-------------AQMVFKQMVSVGVHPNI 468
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T++ + L L + + + + ++P TY +++E + KAG+ +G +
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + NV +YN +I FC+ + A + ++M++ PN T+NTLI +D +
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+ EL+ + CGF D T + + L + LD LS
Sbjct: 589 REASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 632
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 55/137 (40%)
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
IL L I V ++ LF M R P I FN L+ + +MNK E M TL
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ D ++YS I + + A M + G PD T + +L R +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 485 HDIVKTSKERGISFKSF 501
+V E G +F
Sbjct: 173 VALVDQMVEMGYKPDTF 189
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+SP+ YN +I + S + A ++M D P+ TYN LI R G
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID 88
+ + L+K+M G+A + T ++ +
Sbjct: 589 REASAELIKEMRSCGFAGDASTIGLVTN 616
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 229 bits (584), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 137/525 (26%), Positives = 259/525 (49%), Gaps = 35/525 (6%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ ++ A+ K N D+ +QM + +TY+ILI+ CR + AL +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF- 126
+ +M LGY PN+ T + L++G+C++KR++E +++ M PN T +L+HG+F
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 127 ----------------------------------RCLDPHKAFELLIRFMEREPLTQKLV 152
+ D AF LL + + + L+
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
NT++ L +A + ++M +G P T+ ++CL ++ +L I
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+R + P T+ L++A K G+ VE ++ + + K + ++ +Y+ +I+ FC + +D
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A ++ M + P++VT+NTLI G CK V + E+ + + G + T+N +I
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
L +A + A + EMV GVPPN +TYN L+ LC G + +++ +F+ +Q ++
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
P IYT+N +I+ C+ K+E F ++ G++PD +Y+ +I + G +EA
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
F M+++G P+S N ++ ++ G E + +++K + G +
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 603
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/505 (25%), Positives = 241/505 (47%), Gaps = 35/505 (6%)
Query: 26 IDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTI 85
+D A F +M + P ++ L+ I ++ D + L +QM+ LG N YTY+I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
LI+ FC ++ VL M + PN T+ SL++G +A L+ +
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCL---------- 195
+ NTL++ L ++ ASEA A++ +M +G P+ T+ V L
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 196 ---------------------VTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
+ GL +++ + +G++P TY L+ L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
GR + R L+ + + ++ +V +++ +ID F K + A ++ EM R I P++
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
VT+++LI+G C + + +++ ++ PD T+N++I C+ R E+ ++ E
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M + G+ NT+TYNILI+ L GD + +F++M +D + P+I T+N L+ C+ K
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+EKA F + + P ++Y+ +I+ + K+G+ ++ F ++ G PD N
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 471 ILETLVQQGRFEEAHDIVKTSKERG 495
++ ++G EEA + K KE G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDG 566
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 164/363 (45%)
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A L ++ P + + LL ++ + ++ +M + G T+ +
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
C L +L +K G +P T L+ + R E ++ +F
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
N ++N +I N A + M + P+LVT+ +++G CK + LL
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ + +P +N++ID LC+ +DAL+ EM G+ PN +TY+ LI LC
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G + + RL M +I+PD++TF+ALI +F + K+ +AEK + M+ + P +Y
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
S+LI R DEAKQ F M C PD T N +++ + R EE ++ + +
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424
Query: 494 RGI 496
RG+
Sbjct: 425 RGL 427
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 164/416 (39%), Gaps = 72/416 (17%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y V++ L K DLA+ +M + +P YN +I G+C+ +D+A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L K+ME G PNV TY+ LI CN R ++ R+L M ER + P+ T +L+
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 125 -----------------VFRCLDPH--------KAFELLIRFMEREPLTQKLVC------ 153
V R +DP F + R E + + + +V
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 154 ----NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
NTL+ E + R+M RG + + T++ + L D + I
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGR-------------------------DVEG----- 239
+ GV P TY L++ L K G+ +EG
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Query: 240 ------DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
D + N K + +V +YN +I FC+ + A + +EM++ PN +
Sbjct: 516 KVEDGWDLFCNLSLKG-VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 574
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
NTLI +D + + EL+ + CGF D T + + L + LD LS
Sbjct: 575 NTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 630
Score = 92.4 bits (228), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%)
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
+D A + EM P+++ F+ L+S K + L + G + +T++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+I+C CR + AL L +M++ G PN +T + L+ C ++ ++ L +M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
P+ TFN LI NK +A M+ G +PD +Y ++ L K G D A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
MEQ P N I++ L + ++A ++ K + +GI
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 72/156 (46%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ +DA+ EMV+ P+ I ++ L+ ++ + + L ++MQ I + YT++
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI FCR +++ A M+ LG P+ + S+L+ S R EA M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G P++ T N ++ L + EA ++ +G
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P YN +I + S + A F++M D P+ YN LI R G
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 586
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID 88
+ + L+K+M G+A + T ++ +
Sbjct: 587 REASAELIKEMRSCGFAGDASTIGLVTN 614
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 227 bits (579), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 245/507 (48%), Gaps = 16/507 (3%)
Query: 5 GISPSTRLYNAVIDALVKSN-SIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P YNAV+DA ++S +I A F++M Q P+ FTYNILI G C G +D
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L +ME G PNV TY LIDG+C +++ + F++L M + + PN + +++
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ R + +L R ++ NTL+ +A + +M G P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ + + ++N LD RG+ P TY L++ + G E R L
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + +V +YN +I+ C M+ A + +M+++ ++P++V+++T++SG C+
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+V + + ++E G KPD T++S+I C R ++A D EM+ G+PP+ TY
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI + C GD+ ++L+L +M + PD+ T++ LI + ++ +A++ +
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 424 LGLRPDNFSYSALIK-----------ALIKS----GRFDEAKQTFLSMEQNGCNPDSYTS 468
P + +Y LI+ +LIK G EA Q F SM PD
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAY 643
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERG 495
N+++ + G +A+ + K + G
Sbjct: 644 NIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 222/470 (47%), Gaps = 3/470 (0%)
Query: 18 DALVKSNSIDLAYLKFQ--QMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLG 75
D K+ + A L F+ Q + D C +++++ R+ ++D+AL +V + G
Sbjct: 105 DVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHG 164
Query: 76 YAPNVYTYTILIDGFCNAKR-VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
+ P V +Y ++D +KR ++ V + M E V PN T L+ G + A
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA 224
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
L + + L + NTL+ + +LR M +G P +++ +
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
L + E +L +RG TY L++ K G + + + L +
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 344
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
V +Y +I CK M+RA E +MR R + PN T+ TL+ G + +++ +L
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
+ + GF P T+N++I+ C + EDA+ L +M E G+ P+ ++Y+ ++ C
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
DV +LR+ ++M I PD T+++LIQ FC + ++A + ML +GL PD F+Y+
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
ALI A G ++A Q M + G PD T ++++ L +Q R EA
Sbjct: 525 ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Score = 186 bits (471), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/499 (24%), Positives = 226/499 (45%), Gaps = 50/499 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ YN +ID K ID + + M++ +P+ +YN++I+G+CR G + E
Sbjct: 235 GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEV 294
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ +M GY+ + TY LI G+C + + M + P+ T SL+H
Sbjct: 295 SFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHS 354
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + + ++A E L + R + TL+ S +EA +LR+M D G+ P
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 414
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + + +L+ ++G+ P
Sbjct: 415 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP-------------------------- 448
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+V SY+ V+ FC+ +D A + REM ++ I P+ +T+++LI G C+
Sbjct: 449 ---------DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +L +L G PD+FT+ ++I+ C E AL +EMVE GV P+ +TY+
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN---------------ALIQSFCRMN 409
+LI L + RL K+ + P T++ +LI+ FC
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG 619
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
+ +A++ F SML +PD +Y+ +I ++G +A + M ++G + T
Sbjct: 620 MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVI 679
Query: 470 LILETLVQQGRFEEAHDIV 488
+++ L ++G+ E + ++
Sbjct: 680 ALVKALHKEGKVNELNSVI 698
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 190/389 (48%), Gaps = 13/389 (3%)
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQ-KL--VCNTLLYRLSNNSMASEAAAILRK 175
++L+ +PH+ F L + + LT+ KL L ++ ++ E A+++ K
Sbjct: 62 QALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFK 121
Query: 176 MGDRGY---LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK 232
Y SS FD V +++ I+ G P +Y +++A +
Sbjct: 122 SLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIR 181
Query: 233 AGRDVEGDRYLNHVFKDRLVS----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP 288
+ R++ + +VFK+ L S NV +YN++I FC +D A + +M + P
Sbjct: 182 SKRNIS---FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLP 238
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
N+VT+NTLI G+CK ++ +LL + G +P+ ++N +I+ LCR R ++ L
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
+EM G + +TYN LI+ C G+ ++L + +M ++P + T+ +LI S C+
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
+ +A + M GL P+ +Y+ L+ + G +EA + M NG +P T
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGIS 497
N ++ G+ E+A +++ KE+G+S
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 179/408 (43%), Gaps = 50/408 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++PS Y ++I ++ K+ +++ A QM V P+ TY L+ G + G ++EA
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
R++++M G++P+V TY LI+G C ++ + VLE MKE+ + P+ + +++ G
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R D +A + +E+ + ++L+ EA + +M G P+
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + DL + + + +++GV P TY +L+ L K R E R L
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 245 HVFKDRLV-SNVNSYNMVIDC--------------FCKVNMMDRATEICREMRDRDIAPN 289
+F + V S+V + ++ +C FC MM A ++ M ++ P+
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Query: 290 LVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFT----------------FNSMID 333
+N +I GHC+ ++ K L +++ GF T NS+I
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIV 699
Query: 334 CLCRAHRFEDA-------------------LDCLSEMVEWGVPPNTIT 362
+ R+ +A LD L+EM + G PN I+
Sbjct: 700 HVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 15/185 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P Y A+I+A ++ A +M PD TY++LI+G+ + E
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573
Query: 64 ALRLVKQMEGLGYAPNVYTYTILID---------------GFCNAKRVAEVFRVLEIMKE 108
A RL+ ++ P+ TY LI+ GFC + E +V E M
Sbjct: 574 AKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLG 633
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASE 168
+N P+ ++HG R D KA+ L ++ L + L+ L +E
Sbjct: 634 KNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Query: 169 AAAIL 173
+++
Sbjct: 694 LNSVI 698
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 249/486 (51%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGIS + Y+ +I+ + + + LA +M +PD T N L++G C + +
Sbjct: 110 LGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISD 169
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ LV QM +GY P+ +T+ LI G R +E +++ M + P+ T +V+
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + D A LL + + + ++ NT++ L N ++A + +M ++G P
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + CL ++ +L I+R + P T+ L++A K G+ VE ++
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K + ++ +Y+ +I+ FC + +D A + M +D PN+VT+NTLI G CK
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V + EL + + G + T+ ++I +A ++A +MV GV P+ +TY
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+IL+ LC G V +L +F+ +Q ++ PDIYT+N +I+ C+ K+E F S+
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G++P+ +Y+ ++ + G +EA F M++ G PDS T N ++ ++ G
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAA 589
Query: 484 AHDIVK 489
+ ++++
Sbjct: 590 SAELIR 595
Score = 212 bits (540), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 246/492 (50%), Gaps = 8/492 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ ++ A+ K N DL +QM + +TY+ILI+ CR + AL +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P++ T L++GFC+ R+++ ++ M E P+ T +L+HG+FR
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 128 CLDPHKAFELLIRFMER--EP--LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+A L+ R + + +P +T +V N L R A ++L+KM P
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR----GDIDLALSLLKKMEQGKIEP 254
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ + L ++N+ + +G++P TY L+ L GR + R L
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 314
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + ++ NV +++ +ID F K + A ++ EM R I P++ T+++LI+G C
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + + + +++ P+ T+N++I C+A R ++ ++ EM + G+ NT+TY
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI + + +F++M +D + PDI T++ L+ C K+E A F +
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+ PD ++Y+ +I+ + K+G+ ++ F S+ G P+ T ++ ++G EE
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554
Query: 484 AHDIVKTSKERG 495
A + + KE G
Sbjct: 555 ADALFREMKEEG 566
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 164/333 (49%)
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTY 223
S S A A+L KM GY P+ T + + G +++ ++ ++ G +P T+
Sbjct: 130 SQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTF 189
Query: 224 LLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD 283
L+ L++ R E ++ + ++ +Y +V++ CK +D A + ++M
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ 249
Query: 284 RDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFED 343
I P +V +NT+I C V+ L + G +P+ T+NS+I CLC R+ D
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 309
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A LS+M+E + PN +T++ LI + G + + +L+ +M I PDI+T+++LI
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
FC +++++A+ F M++ P+ +Y+ LIK K+ R DE + F M Q G
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++ T ++ Q + A + K G+
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 134/243 (55%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
N+ +Y+++I+CFC+ + + A + +M P++VT N+L++G C + L+
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++E G++PD FTFN++I L R +R +A+ + MV G P+ +TY I++ LC
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
GD+ +L L +KM+ +I P + +N +I + C + A F M G+RP+ +Y
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
++LI+ L GR+ +A + M + NP+ T + +++ V++G+ EA + +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 494 RGI 496
R I
Sbjct: 355 RSI 357
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 185/419 (44%), Gaps = 4/419 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y V++ L K IDLA ++M + +P YN +I +C V++A
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M+ G PNV TY LI CN R ++ R+L M ER + PN T +L+
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +L ++R ++L+ + EA + M + P
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + ++E + +RG+ TY L+ ++A
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D ++ ++ +Y++++D C ++ A + ++ + P++ T+N +I G CK
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V +L L G KP+ T+ +M+ CR E+A EM E G P++ TYN
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYN 575
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LIR+ GD A S L ++M++ R D T + M + +K+F ML+
Sbjct: 576 TLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTN----MLHDGRLDKSFLKMLS 630
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 75/149 (50%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ +DA++ +MV+ P+ + ++ L+ ++ + + L ++MQ IS ++YT++
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI FCR +++ A M+ LG PD + ++L+ R +A M +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIV 488
G PDS+T N ++ L + R EA +V
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALV 209
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 50/123 (40%)
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
++ LF M R P I F+ L+ + +MNK + M LG+ + ++YS LI
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
+ + A M + G PD T N +L R +A +V E G
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 499 KSF 501
SF
Sbjct: 185 DSF 187
Score = 32.3 bits (72), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 38/88 (43%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P+ Y ++ + + A F++M + PD TYN LI R G
Sbjct: 527 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID 88
+ L+++M + + T ++ +
Sbjct: 587 KAASAELIREMRSCRFVGDASTIGLVTN 614
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 249/487 (51%), Gaps = 3/487 (0%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N + +V++ ++ + + M PD LI G CR+G +A ++++ +EG
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
G P+V TY ++I G+C A + VL+ M +V P+ T +++ + +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A E+L R ++R+ + L+ +S A +L +M DRG P+ T++ V
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
+ L+E L+ G +P T+ +++ ++ GR ++ ++ L + +
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+V ++N++I+ C+ ++ RA +I +M PN +++N L+ G CK+ ++ + E L
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++ G PD T+N+M+ LC+ + EDA++ L+++ G P ITYN +I L
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G ++++L +M+A + PD T+++L+ R K+++A K F +G+RP+ ++
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 522
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
++++ L KS + D A + M GC P+ + +++E L +G +EA +++
Sbjct: 523 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 582
Query: 494 RGISFKS 500
+G+ KS
Sbjct: 583 KGLMKKS 589
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 201/449 (44%), Gaps = 46/449 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN +I K+ I+ A +MSV PD TYN ++ +C G + +A
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQA 223
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ +M P+V TYTILI+ C V ++L+ M++R P+ T LV+G
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 283
Query: 125 VFRCLDPHKAFELLIRFMEREPLT----QKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + + I+F+ P + + N +L + + +A +L M +G
Sbjct: 284 ICK----EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ P TF+ + L L IL+ + G +P
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP---------------------- 377
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
N SYN ++ FCK MDRA E M R P++VT+NT+++
Sbjct: 378 -------------NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CKD +V E+L L G P T+N++ID L +A + A+ L EM + P+T
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITY+ L+ L G V +++ F + + I P+ TFN+++ C+ + ++A
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF 544
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEA 449
M+ G +P+ SY+ LI+ L G EA
Sbjct: 545 MINRGCKPNETSYTILIEGLAYEGMAKEA 573
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 179/388 (46%), Gaps = 10/388 (2%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ +SP YN ++ +L S + A +M C PD TY ILI CR V
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT----VR 119
A++L+ +M G P+V TY +L++G C R+ E + L M PN T +R
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGD 178
S+ R +D K L+ M R+ + +V N L+ L + A IL KM
Sbjct: 318 SMCS-TGRWMDAEK----LLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ 372
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
G P S +++ + ++ L+ + RG P TY ++ AL K G+ +
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
LN + + +YN VID K +A ++ EMR +D+ P+ +T+++L+
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G ++ +V + + G +P+ TFNS++ LC++ + + A+D L M+ G P
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP 552
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKM 386
N +Y ILI L G +L L ++
Sbjct: 553 NETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 156/352 (44%), Gaps = 35/352 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G +P YN +++ + K +D A M C+P+ T+NI++ +C G +A
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L+ M G++P+V T+ ILI+ C + +LE M + PN + L+HG
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHG 388
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ K + I ++ER M RG P+
Sbjct: 389 FCK----EKKMDRAIEYLER-------------------------------MVSRGCYPD 413
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ +T L + + IL+ +G P TY +++ L KAG+ + + L+
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L + +Y+ ++ + +D A + E I PN VTFN+++ G CK
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSR 533
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ + + LV ++ G KP++ ++ +I+ L ++AL+ L+E+ G+
Sbjct: 534 QTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P YN ++ AL K ++ A Q+S C P TYN +I G+ + G +A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++L+ +M P+ TY+ L+ G +V E + + + PN T S++ G
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A + L+ + R + L+ L+ MA EA +L ++ ++G + +
Sbjct: 529 LCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKK 588
Query: 185 SST 187
SS
Sbjct: 589 SSA 591
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 65/138 (47%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G SP YN VID L K+ A +M KPD TY+ L+ G+ R G
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
VDEA++ + E +G PN T+ ++ G C +++ L M R PNE +
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 121 LVHGVFRCLDPHKAFELL 138
L+ G+ +A ELL
Sbjct: 560 LIEGLAYEGMAKEALELL 577
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 228/499 (45%), Gaps = 36/499 (7%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I G+ P T YN +++ LV NS+ L + +MSV KPD T+N+LI +CR
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A+ +++ M G P+ T+T ++ G+ + R+ E M E + +V
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR- 179
+VHG + +A +++M ++
Sbjct: 265 IVHGFCK-----------------------------------EGRVEDALNFIQEMSNQD 289
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G+ P+ TF+ V L + I+D ++ G P TY ++ L K G E
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
L+ + N +YN +I CK N ++ ATE+ R + + I P++ TFN+LI G
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
C EL + G +PD+FT+N +ID LC + ++AL+ L +M G +
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
ITYN LI C + +F +M+ +S + T+N LI C+ ++E A +
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M+ G +PD ++Y++L+ + G +A +M NGC PD T ++ L + G
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 480 RFEEAHDIVKTSKERGISF 498
R E A ++++ + +GI+
Sbjct: 590 RVEVASKLLRSIQMKGINL 608
Score = 209 bits (532), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 226/475 (47%), Gaps = 3/475 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P + + V+ ++ +D A +QM C + N+++HG C+ G V++A
Sbjct: 219 GLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDA 278
Query: 65 LRLVKQMEGL-GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L +++M G+ P+ YT+ L++G C A V ++++M + P+ T S++
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + + +A E+L + + R+ + NTL+ L + EA + R + +G LP
Sbjct: 339 GLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF+ + L + + + +G +P TY +L+++L G+ E L
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +V +YN +ID FCK N A EI EM ++ N VT+NTLI G CK
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V +L+ ++ G KPDK+T+NS++ CR + A D + M G P+ +TY
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI LC G V + +L + +Q I+ + +N +IQ R K +A F ML
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638
Query: 424 LG-LRPDNFSYSALIKALIKSGR-FDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
PD SY + + L G EA + + + G P+ + ++ E L+
Sbjct: 639 QNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLL 693
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 165/328 (50%), Gaps = 3/328 (0%)
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
KM G P+ STF+ + L L +L+ G+ P T+ +M+ + G
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 235 RDVEGDRYLNHVFKDRLVSNVN-SYNMVIDCFCKVNMMDRATEICREMRDRD-IAPNLVT 292
D++G + + S N S N+++ FCK ++ A +EM ++D P+ T
Sbjct: 239 -DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMV 352
FNTL++G CK V E++ ++L+ G+ PD +T+NS+I LC+ ++A++ L +M+
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIE 412
PNT+TYN LI +LC V + L + + + I PD+ TFN+LIQ C
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 413 KAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLIL 472
A + F M + G PD F+Y+ LI +L G+ DEA ME +GC T N ++
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 473 ETLVQQGRFEEAHDIVKTSKERGISFKS 500
+ + + EA +I + G+S S
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNS 505
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 166/391 (42%), Gaps = 70/391 (17%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P +N++I L + + +A F++M C+PD FTYN+LI +C G +DEA
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++KQME G A +V TY LIDGFC A + E + + M+ VHG
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME--------------VHG 500
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
V R + NTL+ L + +AA ++ +M G P+
Sbjct: 501 VSR---------------------NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ +T G D+ + I+ G +P TY L+ L KAGR + L
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP-NLVTFNTLISGHCKD 303
+ + ++YN VI + A + REM +++ AP + V++ + G C
Sbjct: 600 SIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNG 659
Query: 304 A-EVHKTRELLVMLLECGFKPD-----------------------------KFTFN---- 329
+ + + LV LLE GF P+ K F+
Sbjct: 660 GGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEV 719
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
SM+ L + +F+DAL L +++ P T
Sbjct: 720 SMVKGLLKIRKFQDALATLGGVLDSRQPRRT 750
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 1/181 (0%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
F P+ + ++ L R+ F+D L +M T T+ ILI S L
Sbjct: 79 FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEIL 138
Query: 381 RLFQKMQAD-RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+ M + + PD + +N ++ N ++ E + M G++PD +++ LIKA
Sbjct: 139 SVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKA 198
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
L ++ + A M G PD T +++ +++G + A I + E G S+
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS 258
Query: 500 S 500
+
Sbjct: 259 N 259
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 222 bits (565), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 250/492 (50%), Gaps = 8/492 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ A+ K D+ ++M + +TYNILI+ CR + AL L
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P++ T + L++G+C+ KR+++ +++ M E P+ T +L+HG+F
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 128 CLDPHKAFELLIRFMER--EP--LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+A L+ R ++R +P +T +V N L R + A +L KM
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL----ALNLLNKMEAAKIEA 258
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ F+ + L +++ + +G++P TY L+ L GR + + L
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + ++ N+ ++N +ID F K A ++ +M R I P++ T+N+L++G C
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ K +++ ++ PD T+N++I C++ R ED + EM G+ +T+TY
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI+ L GD + ++F++M +D + PDI T++ L+ C K+EKA + F M
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
++ D + Y+ +I+ + K+G+ D+ F S+ G P+ T N ++ L + +E
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 484 AHDIVKTSKERG 495
A+ ++K KE G
Sbjct: 559 AYALLKKMKEDG 570
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 221/466 (47%), Gaps = 43/466 (9%)
Query: 26 IDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTI 85
+D A F M + P +N L+ I ++ D + L ++M+ L +YTY I
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
LI+ FC +++ +L M + P+ T+ SL++G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGY-------------------- 165
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN--- 202
+ S+A A++ +M + GY P++ TF T L+ GL L+
Sbjct: 166 ---------------CHGKRISDAVALVDQMVEMGYRPDTITF----TTLIHGLFLHNKA 206
Query: 203 -ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
E ++D ++RG +P TY +++ L K G LN + ++ ++V +N +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
ID CK +D A + +EM + I PN+VT+++LIS C +LL ++E
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
P+ TFN++ID + +F +A +M++ + P+ TYN L+ C + ++ +
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
+F+ M + PD+ T+N LI+ FC+ ++E + F M GL D +Y+ LI+ L
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
G D A++ F M +G PD T +++L+ L G+ E+A ++
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 492
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 222/486 (45%), Gaps = 35/486 (7%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG PS +++++ I A QM +PD T+ LIHG+ E
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ LV +M G PN+ TY ++++G C +L M+ + EA V
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI---EADV----- 260
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
++ NT++ L +A + ++M +G P
Sbjct: 261 ---------------------------VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 293
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ ++CL + ++ +L I++ + P T+ L++A K G+ VE ++
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K + ++ +YN +++ FC + +D+A ++ M +D P++VT+NTLI G CK
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V EL + G D T+ ++I L ++A +MV GVPP+ +TY
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 473
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+IL+ LC G + ++L +F MQ I DIY + +I+ C+ K++ F S+
Sbjct: 474 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 533
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G++P+ +Y+ +I L EA M+++G P+S T N ++ ++ G
Sbjct: 534 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAA 593
Query: 484 AHDIVK 489
+ ++++
Sbjct: 594 SAELIR 599
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 175/368 (47%), Gaps = 4/368 (1%)
Query: 133 KAFELLIRF---MEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
K F+++I M+R + L N L+ S S A A+L KM GY P T
Sbjct: 99 KKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTL 158
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ G +++ ++D ++ G +P T+ L+ L+ + E ++ + +
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
N+ +Y +V++ CK D A + +M I ++V FNT+I CK V
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 278
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
L + G +P+ T++S+I CLC R+ DA LS+M+E + PN +T+N LI
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
+ G + +L+ M I PDI+T+N+L+ FC ++++KA++ F M++ P
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
D +Y+ LIK KS R ++ + F M G D+ T +++ L G + A +
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 489 KTSKERGI 496
K G+
Sbjct: 459 KQMVSDGV 466
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 204/483 (42%), Gaps = 40/483 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P T + +I L N A +M C+P+ TY ++++G+C+ G D
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L+ +ME +V + +ID C + V + + + M+ + + PN T SL+
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI- 302
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
CL + + S+A+ +L M ++ P
Sbjct: 303 ---SCLCSYGRW-------------------------------SDASQLLSDMIEKKINP 328
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
TF+ + V E + D IKR + P TY L+ R + +
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ +V +YN +I FCK ++ TE+ REM R + + VT+ TLI G D
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 448
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ +++ ++ G PD T++ ++D LC + E AL+ M + + + Y
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+I +C G V LF + + P++ T+N +I C +++A M
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN--PDSYTSNLILETLVQQGRF 481
G P++ +Y+ LI+A ++ G D+A L E C D+ T L+ ++ GR
Sbjct: 569 DGPLPNSGTYNTLIRAHLRDG--DKAASAELIREMRSCRFVGDASTIGLV-ANMLHDGRL 625
Query: 482 EEA 484
+++
Sbjct: 626 DKS 628
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 190/419 (45%), Gaps = 4/419 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y V++ L K DLA +M + + D +N +I +C+ VD+A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 279
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L K+ME G PNV TY+ LI C+ R ++ ++L M E+ + PN T +L+
Sbjct: 280 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 339
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +L ++R N+L+ + +A + M + P+
Sbjct: 340 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + + + RG+ TY L++ L+ G +
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D + ++ +Y++++D C +++A E+ M+ +I ++ + T+I G CK
Sbjct: 460 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 519
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V +L L G KP+ T+N+MI LC ++A L +M E G PN+ TYN
Sbjct: 520 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYN 579
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LIR+ GD A S L ++M++ R D T I M + +K+F ML+
Sbjct: 580 TLIRAHLRDGDKAASAELIREMRSCRFVGDAST----IGLVANMLHDGRLDKSFLDMLS 634
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 133/284 (46%), Gaps = 35/284 (12%)
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K R + ++ +N ++ K+ D + +M+ +I L T+N LI+ C+ +++
Sbjct: 78 KSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQIS 137
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI------ 361
LL +++ G++P T +S+++ C R DA+ + +MVE G P+TI
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 362 -----------------------------TYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
TY +++ LC GD +L L KM+A +I
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 257
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
D+ FN +I S C+ ++ A F M T G+RP+ +YS+LI L GR+ +A Q
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M + NP+ T N +++ V++G+F EA + +R I
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ T Y +I L D A F+QM D PD TY+IL+ G+C G
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++AL + M+ ++Y YT +I+G C A +V + + + + + V PN T +
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ +A+ LL + E PL NTL+ + + +A ++R+M
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR 605
Query: 181 YLPESSTFDYTVTCLVTG 198
++ ++ST L G
Sbjct: 606 FVGDASTIGLVANMLHDG 623
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/480 (28%), Positives = 238/480 (49%), Gaps = 6/480 (1%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQM---EGLGYAPN 79
S+++D+ + ++ C P+ F+YNIL+ G+C EAL L+ M G G P+
Sbjct: 139 SDAMDIVLRRMTELG---CIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPD 195
Query: 80 VYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLI 139
V +YT +I+GF + + M +R + P+ T S++ + + KA E+L
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLN 255
Query: 140 RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGL 199
++ + + N++L+ ++ EA L+KM G P+ T+ + L
Sbjct: 256 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG 315
Query: 200 DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYN 259
E I D+ KRG+KP +TY L++ G VE L+ + ++ + + ++
Sbjct: 316 RCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFS 375
Query: 260 MVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLEC 319
++I + K +D+A + +MR + + PN VT+ +I CK V +++
Sbjct: 376 ILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 435
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G P +NS+I LC +++E A + + EM++ G+ NTI +N +I S C G V S
Sbjct: 436 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 495
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
+LF+ M + P++ T+N LI +C K+++A K M+++GL+P+ +YS LI
Sbjct: 496 EKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLING 555
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
K R ++A F ME +G +PD T N+IL+ L Q R A ++ E G +
Sbjct: 556 YCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 615
Score = 221 bits (562), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 140/534 (26%), Positives = 247/534 (46%), Gaps = 41/534 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y VI+ K D AY + +M PD TYN +I +C+ +D+A
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ ++ M G P+ TY ++ G+C++ + E L+ M+ V P+ T L+
Sbjct: 251 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310
Query: 125 V---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ RC++ K F+ + + + +T TLL + E +L M G
Sbjct: 311 LCKNGRCMEARKIFDSMTKRGLKPEITTY---GTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P+ F + +++ + ++G+ P TY ++ L K+GR +
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
Y + + L YN +I C N +RA E+ EM DR I N + FN++I HC
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K+ V ++ +L +++ G KP+ T+N++I+ C A + ++A+ LS MV G+ PNT+
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ------------------ 403
TY+ LI C I + +L LF++M++ +SPDI T+N ++Q
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 404 -----------------SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
C+ + A + F ++ + L+ + +++ +I AL+K GR
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 667
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
DEAK F++ NG P+ +T L+ E ++ QG EE + + ++ G + S
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDS 721
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/496 (22%), Positives = 204/496 (41%), Gaps = 70/496 (14%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++ ++ + M + PD + ++ILI + G VD+A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + +M G PN TY +I C + RV + E M + + P SL+HG
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ C +A EL++ ++R + NT+ + +S E I
Sbjct: 451 LCTCNKWERAEELILEMLDR-----GICLNTIFFNSIIDSHCKEGRVI------------ 493
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
E+ + + ++ GVKP TY L+ AG+ E + L+
Sbjct: 494 ------------------ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS 535
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L N +Y+ +I+ +CK++ M+ A + +EM ++P+++T+N ++ G +
Sbjct: 536 GMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTR 595
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+EL V + E G + + T+N ++ LC+ +DAL + + T+N
Sbjct: 596 RTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFN 655
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+I +L +G + LF ++ + P+ +T+ + ++
Sbjct: 656 IMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN-------------------- 695
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+I G +E Q FLSME NGC DS N I+ L+Q+G A
Sbjct: 696 ---------------IIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
Query: 485 HDIVKTSKERGISFKS 500
+ E+ S ++
Sbjct: 741 GTYLSMIDEKHFSLEA 756
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 159/313 (50%), Gaps = 8/313 (2%)
Query: 193 TCLVTGLDLNE-TCGILDTFIKR----GVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
T L+ GL ++ T +D ++R G P +Y +L++ L R E L+ +
Sbjct: 126 TPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMA 185
Query: 248 KDRLVS---NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
DR +V SY VI+ F K D+A EM DR I P++VT+N++I+ CK
Sbjct: 186 DDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQ 245
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ K E+L +++ G PD T+NS++ C + + ++A+ L +M GV P+ +TY+
Sbjct: 246 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYS 305
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+L+ LC G + ++F M + P+I T+ L+Q + + + M+
Sbjct: 306 LLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 365
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ PD++ +S LI A K G+ D+A F M Q G NP++ T ++ L + GR E+A
Sbjct: 366 GIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA 425
Query: 485 HDIVKTSKERGIS 497
+ + G+S
Sbjct: 426 MLYFEQMIDEGLS 438
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 94/231 (40%), Gaps = 35/231 (15%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P+ YN +I+ + +D A M KP+ TY+ LI+G C+I +++
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L K+ME G +P++ TY I++ G +R A
Sbjct: 565 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA-------------------------- 598
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
A EL +R E + N +L+ L N + +A + + +
Sbjct: 599 ---------AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKL 649
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
E+ TF+ + L+ +E + F G+ P + TY L+ E + G
Sbjct: 650 EARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG 700
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 249/492 (50%), Gaps = 8/492 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ A+ K DL ++M + +TYNILI+ CR + AL L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P++ T + L++G+C+ KR+++ +++ M E P+ T +L+HG+F
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 128 CLDPHKAFELLIRFMER--EP--LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+A L+ R ++R +P +T +V N L R A +L KM
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR----GDIDLAFNLLNKMEAAKIEA 183
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ F+ + L +++ + +G++P TY L+ L GR + + L
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + ++ N+ ++N +ID F K A ++ +M R I P++ T+N+LI+G C
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ K +++ ++ PD T+N++I C++ R ED + EM G+ +T+TY
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LI+ L GD + ++F++M +D + PDI T++ L+ C K+EKA + F M
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
++ D + Y+ +I+ + K+G+ D+ F S+ G P+ T N ++ L + +E
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 483
Query: 484 AHDIVKTSKERG 495
A+ ++K KE G
Sbjct: 484 AYALLKKMKEDG 495
Score = 219 bits (559), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 241/486 (49%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGIS + YN +I+ + + I LA +M +P T + L++G C + +
Sbjct: 39 LGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 98
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ LV QM +GY P+ T+T LI G + +E +++ M +R PN T +V+
Sbjct: 99 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 158
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + D AF LL + + ++ NT++ L +A + ++M +G P
Sbjct: 159 GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 218
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ ++CL + ++ +L I++ + P T+ L++A K G+ VE ++
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K + ++ +YN +I+ FC + +D+A ++ M +D P+L T+NTLI G CK
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V EL + G D T+ ++I L ++A +MV GVPP+ +TY
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 398
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+IL+ LC G + ++L +F MQ I DIY + +I+ C+ K++ F S+
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 458
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G++P+ +Y+ +I L EA M+++G PDS T N ++ ++ G
Sbjct: 459 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 518
Query: 484 AHDIVK 489
+ ++++
Sbjct: 519 SAELIR 524
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 176/368 (47%), Gaps = 4/368 (1%)
Query: 133 KAFELLIRF---MEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
K F+L+I M+R ++ L N L+ S S A A+L KM GY P T
Sbjct: 24 KKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTL 83
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ G +++ ++D ++ G +P T+ L+ L+ + E ++ + +
Sbjct: 84 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 143
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
N+ +Y +V++ CK +D A + +M I ++V FNT+I CK V
Sbjct: 144 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 203
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
L + G +P+ T++S+I CLC R+ DA LS+M+E + PN +T+N LI
Sbjct: 204 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 263
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
+ G + +L M I PDI+T+N+LI FC ++++KA++ F M++ P
Sbjct: 264 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 323
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
D +Y+ LIK KS R ++ + F M G D+ T +++ L G + A +
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 489 KTSKERGI 496
K G+
Sbjct: 384 KQMVSDGV 391
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 192/419 (45%), Gaps = 4/419 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y V++ L K IDLA+ +M + + D +N +I +C+ VD+A
Sbjct: 145 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 204
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L K+ME G PNV TY+ LI C+ R ++ ++L M E+ + PN T +L+
Sbjct: 205 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 264
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +L ++R N+L+ + +A + M + P+
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + + + RG+ TY L++ L+ G +
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ D + ++ +Y++++D C +++A E+ M+ +I ++ + T+I G CK
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 444
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V +L L G KP+ T+N+MI LC ++A L +M E G P++ TYN
Sbjct: 445 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYN 504
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LIR+ GD A S L ++M++ R D T I M + +K+F ML+
Sbjct: 505 TLIRAHLRDGDKAASAELIREMRSCRFVGDAST----IGLVANMLHDGRLDKSFLDMLS 559
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 39/283 (13%)
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K R + ++ +N ++ K+ D + +M+ I+ NL T+N LI+ C+ +++
Sbjct: 3 KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 62
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI------ 361
LL +++ G++P T +S+++ C R DA+ + +MVE G P+TI
Sbjct: 63 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 122
Query: 362 -----------------------------TYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
TY +++ LC GD+ + L KM+A +I
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 182
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
D+ FN +I S C+ ++ A F M T G+RP+ +YS+LI L GR+ +A Q
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH----DIVKTS 491
M + NP+ T N +++ V++G+F EA D++K S
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ T Y +I L D A F+QM D PD TY+IL+ G+C G
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++AL + M+ ++Y YT +I+G C A +V + + + + + V PN T +
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ +A+ LL + E PL NTL+ + + +A ++R+M
Sbjct: 471 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 530
Query: 181 YLPESSTFDYTVTCLVTG 198
++ ++ST L G
Sbjct: 531 FVGDASTIGLVANMLHDG 548
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 43/110 (39%)
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGR 445
M R P I+ FN L+ + +M K + M LG+ + ++Y+ LI + +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 446 FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
A M + G P T + +L R +A +V E G
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 110
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/530 (25%), Positives = 256/530 (48%), Gaps = 39/530 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ +N + A+ ++ DL + M ++ + D +T I+I+ CR + A +
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ + LGY P+ T++ L++GFC RV+E +++ M E P+ TV +L++G+
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGL-- 185
Query: 128 CLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
CL +A L+ R +E ++ +L RL + ++ A + RKM +R
Sbjct: 186 CLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASV 245
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+ + L ++ + + +G+K TY L+ L G+ +G + L
Sbjct: 246 VQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLRE 305
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++ +V +++ +ID F K + A E+ EM R IAP+ +T+N+LI G CK+
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL-------------------- 345
+H+ ++ +++ G +PD T++ +I+ C+A R +D +
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 346 ---------------DCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+ EMV GVPP+ +TY IL+ LC G++ ++L +F+KMQ R
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
++ I +N +I C +K++ A F S+ G++PD +Y+ +I L K G EA
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
F M+++GC PD +T N+++ + + ++++ K G S S
Sbjct: 546 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADS 595
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 211/452 (46%), Gaps = 39/452 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y V++ L KS + LA F++M K Y+I+I +C+ G D+A
Sbjct: 205 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 264
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +ME G +V TY+ LI G CN + + ++L M RN+ P+ T +L+
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALID- 323
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
VF K +LL EA + +M RG P+
Sbjct: 324 VFV-----KEGKLL-----------------------------EAKELYNEMITRGIAPD 349
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + L+E + D + +G +P TY +L+ + KA R +G R
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ L+ N +YN ++ FC+ ++ A E+ +EM R + P++VT+ L+ G C +
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E++K E+ + + +N +I +C A + +DA + + GV P+ +TYN
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++I LC G ++ + LF+KM+ D +PD +T+N LI++ + + + + M
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 589
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
G D+ + +I ++ R D ++FL M
Sbjct: 590 GFSADSSTIKMVID-MLSDRRLD---KSFLDM 617
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 112/282 (39%), Gaps = 43/282 (15%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P T YN++ID K N + A F M C+PD TY+ILI+ C+ VD+
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 65 LRLVKQMEGLGYAPN-----------------------------------VYTYTILIDG 89
+RL +++ G PN V TY IL+DG
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C+ + + + E M++ + ++HG+ A+ L ++
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ N ++ L SEA + RKM + G P+ T++ + + G L + +++
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIE 584
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
G ST ++++ L DR L+ F D L
Sbjct: 585 EMKVCGFSADSSTIKMVIDML--------SDRRLDKSFLDML 618
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 4/197 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS G+ P+T YN ++ +S ++ A FQ+M P TY IL+ G+C G
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++AL + ++M+ + Y I+I G CNA +V + + + + ++ V P+ T
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR--LSNNSMASEAAAILRKMGD 178
++ G+ + +A ++L R M+ + T +L R L + + S + ++ +M
Sbjct: 531 MIGGLCKKGSLSEA-DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS-SVELIEEMKV 588
Query: 179 RGYLPESSTFDYTVTCL 195
G+ +SST + L
Sbjct: 589 CGFSADSSTIKMVIDML 605
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 64/156 (41%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ DA+D M++ P I +N L ++ L + M+ + I D+YT
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
+I +CR K+ A LG PD ++S L+ GR EA M +
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
PD T + ++ L +GR EA ++ E G
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 205
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/495 (27%), Positives = 246/495 (49%), Gaps = 35/495 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ A+ K DL ++M + +TYNILI+ CR + AL L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P++ T + L++G+C+ KR+++ +++ M E P+ T +L+HG+F
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 128 CLDPHKAFELLIRFMER--EP--LTQKLVCNTLLYR--------LSNNSMASEAAA---- 171
+A L+ R ++R +P +T +V N L R L N A++ A
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 172 -------------------ILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
+ +M ++G P T+ ++CL ++ +L I
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+R + P T+ L++A K G+ VE ++ + + K + ++ +Y+ +I+ FC + +D
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A + M +D PN+VT+NTLI+G CK + + EL + + G + T+ ++I
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
+A ++A +MV GV PN +TYN L+ LC G + +++ +F+ +Q ++
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
P IYT+N +I+ C+ K+E F S+ G++PD Y+ +I + G +EA
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562
Query: 453 FLSMEQNGCNPDSYT 467
F M ++G PDS T
Sbjct: 563 FRKMREDGPLPDSGT 577
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 175/368 (47%), Gaps = 4/368 (1%)
Query: 133 KAFELLIRF---MEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
K F+L+I M+R ++ L N L+ S S A A+L KM GY P T
Sbjct: 99 KKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTL 158
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ G +++ ++D ++ G +P T+ L+ L+ + E ++ + +
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
N+ +Y +V++ CK +D A + +M I N+V ++T+I CK
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 278
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
L + G +P+ T++S+I CLC R+ DA LS+M+E + PN +T+N LI
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
+ G + + +L+ +M I PDI+T+++LI FC +++++A+ F M++ P
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+ +Y+ LI K+ R DE + F M Q G ++ T ++ Q + A +
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 489 KTSKERGI 496
K G+
Sbjct: 459 KQMVSDGV 466
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 130/284 (45%), Gaps = 35/284 (12%)
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
K R + ++ +N ++ K+ D + +M+ I+ NL T+N LI+ C+ +++
Sbjct: 78 KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 137
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI------ 361
LL +++ G++P T +S+++ C R DA+ + +MVE G P+TI
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 362 -----------------------------TYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
TY +++ LC GD+ + L KM+A +I
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 257
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
++ ++ +I S C+ + A F M G+RP+ +YS+LI L R+ +A +
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL 317
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M + NP+ T N +++ V++G+ EA + +R I
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 243/495 (49%), Gaps = 13/495 (2%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P+ + V+ A N ID A + M+ C P+ Y LIH + + V+EAL
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 272
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+L+++M +G P+ T+ +I G C R+ E +++ M R P++ T L++G+
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDRGYLPE 184
+ A +L R P + ++ NTL++ + +A A+L M G +P+
Sbjct: 333 CKIGRVDAAKDLFYRI----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 388
Query: 185 SSTFDYTVTCL----VTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
T++ + + GL L +L +G KP +Y +L++ K G+ E
Sbjct: 389 VCTYNSLIYGYWKEGLVGLALE----VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
LN + D L N +N +I FCK + + A EI REM + P++ TFN+LISG
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ E+ LL ++ G + T+N++I+ R ++A ++EMV G P +
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITYN LI+ LC G+V ++ LF+KM D +P + N LI CR +E+A +
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ G PD ++++LI L ++GR ++ F ++ G PD+ T N ++ L + G
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF 684
Query: 481 FEEAHDIVKTSKERG 495
+A ++ E G
Sbjct: 685 VYDACLLLDEGIEDG 699
Score = 207 bits (527), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/490 (28%), Positives = 224/490 (45%), Gaps = 5/490 (1%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ + YN V++ LV N +A F M + P FT+ +++ C + +D AL L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
++ M G PN Y LI RV E ++LE M P+ T ++ G+ +
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
++A +++ R + R + L+ L A + ++ PE
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVI 355
Query: 188 FDYTVTCLVTGLDLNETCGIL-DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
F+ + VT L++ +L D G+ P TY L+ +K G L+ +
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
NV SY +++D FCK+ +D A + EM + PN V FN LIS CK+ +
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ E+ + G KPD +TFNS+I LC + AL L +M+ GV NT+TYN L
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I + G++ + +L +M D T+N+LI+ CR +++KA F ML G
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P N S + LI L +SG +EA + M G PD T N ++ L + GR E+
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 487 IVKTSKERGI 496
+ + + GI
Sbjct: 656 MFRKLQAEGI 665
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 214/481 (44%), Gaps = 48/481 (9%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
+G P +N VI L K + I+ A +M + PD TY L++G+C+IG VD
Sbjct: 280 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL-EIMKERNVCPNEATVRSL 121
A L ++ P + + LI GF R+ + VL +++ + P+ T SL
Sbjct: 340 AAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
++G ++ + A +L M ++G
Sbjct: 396 IYGYWK-----------------------------------EGLVGLALEVLHDMRNKGC 420
Query: 182 LPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
P Y+ T LV G ++E +L+ G+KP + L+ A K R
Sbjct: 421 KPNV----YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIP 476
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E + + +V ++N +I C+V+ + A + R+M + N VT+NTLI
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
+ + E+ + R+L+ ++ G D+ T+NS+I LCRA + A +M+ G
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P+ I+ NILI LC G V ++ ++M +PDI TFN+LI CR +IE
Sbjct: 597 PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTM 656
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F + G+ PD +++ L+ L K G +A ++G P+ T +++L++++
Sbjct: 657 FRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIP 716
Query: 478 Q 478
Q
Sbjct: 717 Q 717
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 184/408 (45%), Gaps = 38/408 (9%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVD-QCKPDRFTYNILIHGICRIGVVDEALR 66
P ++N +I V +D A M PD TYN LI+G + G+V AL
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
++ M G PNVY+YTIL+DGFC ++ E + VL M + PN
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV---------- 460
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
F LI +E +R+ EA I R+M +G P+
Sbjct: 461 -------GFNCLISAFCKE------------HRIP------EAVEIFREMPRKGCKPDVY 495
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH- 245
TF+ ++ L ++ +L I GV TY L+ A + G E + +N
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
VF+ + + +YN +I C+ +D+A + +M AP+ ++ N LI+G C+
Sbjct: 556 VFQGSPLDEI-TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 614
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
V + E ++ G PD TFNS+I+ LCRA R ED L ++ G+PP+T+T+N
Sbjct: 615 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
L+ LC G V + L + D P+ T++ L+QS +++
Sbjct: 675 LMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 158/340 (46%), Gaps = 10/340 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ GI P YN++I K + LA M CKP+ ++Y IL+ G C++G
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK 439
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+DEA ++ +M G PN + LI FC R+ E + M + P+ T S
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSM-----ASEAAAILRK 175
L+ G+ + A LL R+ +++ +V NT+ Y N+ EA ++ +
Sbjct: 500 LISGLCEVDEIKHALWLL-----RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
M +G + T++ + L ++++ + + ++ G P + +L+ L ++G
Sbjct: 555 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 614
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
E + + ++ ++N +I+ C+ ++ + R+++ I P+ VTFNT
Sbjct: 615 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
L+S CK V+ LL +E GF P+ T++ ++ +
Sbjct: 675 LMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 86/181 (47%)
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
TR +L M +P ++N +++ L + + A + +M+ +PP T+ ++
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 223
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+++ CA+ ++ +L L + M P+ + LI S + N++ +A + M +G
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
PD +++ +I L K R +EA + M G PD T ++ L + GR + A D
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 487 I 487
+
Sbjct: 344 L 344
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%)
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P +YN+++ L + + +F M + +I P ++TF ++++FC +N+I+ A
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
M G P++ Y LI +L K R +EA Q M GC PD+ T N ++ L +
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 478 QGRFEEAHDIVKTSKERGIS 497
R EA +V RG +
Sbjct: 300 FDRINEAAKMVNRMLIRGFA 319
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 215 bits (548), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 244/488 (50%), Gaps = 16/488 (3%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
RLY D+L+ + ++ A+ V +C ++ IG ++EA+ +V
Sbjct: 128 RLYLVTADSLLANGNLQKAH------EVMRC---------MLRNFSEIGRLNEAVGMVMD 172
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
M+ G P+ T +++ + V + M R V P+ ++ + +V G FR
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A L ++R + C +L L N + + A RKM D G+ P F
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 292
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR-YLNHVFKD 249
+ L + + +L+ ++ G KP T+ L++ L K G + R +L V D
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 352
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
NV++Y +I +CK + ++RA + M+++ + PN+ T+ TLI+GHCK +
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
EL+ ++ + GF P+ +T+N+ ID LC+ R +A + L++ G+ + +TY ILI+
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
C D+ ++L F +M D+ N LI +FCR K++++E+ F +++LGL P
Sbjct: 473 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 532
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y+++I K G D A + F +M+++GC PDS+T ++ L ++ +EA + +
Sbjct: 533 KETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 592
Query: 490 TSKERGIS 497
+RG+S
Sbjct: 593 AMIDRGLS 600
Score = 142 bits (357), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 186/459 (40%), Gaps = 69/459 (15%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHG---------- 54
G++PS+ N V++ V+ I+ A F +MSV PD +Y +++ G
Sbjct: 177 GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 236
Query: 55 -------------------------ICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDG 89
+C G+V+ A+ ++M LG+ PN+ +T LIDG
Sbjct: 237 DRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDG 296
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
C + + F +LE M PN T +L+ G+ + KAF L ++ + +
Sbjct: 297 LCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDT--- 353
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
Y P T+ + LN +
Sbjct: 354 -------------------------------YKPNVHTYTSMIGGYCKEDKLNRAEMLFS 382
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
++G+ P +TY L+ KAG +N + + + N+ +YN ID CK +
Sbjct: 383 RMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKS 442
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
A E+ + + + VT+ LI CK ++++ + + GF+ D N
Sbjct: 443 RAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNN 502
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
+I CR + +++ +V G+ P TY +I C GD+ +L+ F M+
Sbjct: 503 ILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRH 562
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
PD +T+ +LI C+ + +++A K + +M+ GL P
Sbjct: 563 GCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 181/402 (45%), Gaps = 13/402 (3%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P+ + ++ID L K SI A+ ++M + KP+ +T+ LI G+C+ G ++
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 340
Query: 64 ALRL-VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A RL +K + Y PNV+TYT +I G+C ++ + MKE+ + PN T +L+
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
+G + +A+EL+ + + N + L S A EA +L K G
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 460
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
+ T+ + D+N+ K G + +L+ A + + E +R
Sbjct: 461 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 520
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
V L+ +Y +I C+CK +D A + M+ P+ T+ +LISG CK
Sbjct: 521 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCK 580
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE--WGVPPNT 360
+ V + +L +++ G P + T ++ C+ + +A+ L + + W
Sbjct: 581 KSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLW-----I 635
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKM-----QADRISPDIYT 397
T L+R LC+ V + FQK+ ADR++ +T
Sbjct: 636 RTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFT 677
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 240/493 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ + + +I+ + + LA+ ++ +P+ T++ LI+G+C G V EA
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L LV +M +G+ P++ T L++G C + + AE +++ M E PN T +++
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A ELL + ER + + ++ L + A + +M +G
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + ++ +L IKR + P T+ +L+++ K G+ E +
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + +Y +ID FCK N +D+A ++ M + PN+ TFN LI+G+CK
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ EL + G D T+N++I C + A + EMV VPPN +TY
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 477
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
IL+ LC G+ ++L +F+K++ ++ DI +N +I C +K++ A F S+
Sbjct: 478 ILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G++P +Y+ +I L K G EA+ F ME++G PD +T N+++ + G ++
Sbjct: 538 GVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKS 597
Query: 485 HDIVKTSKERGIS 497
+++ K G S
Sbjct: 598 VKLIEELKRCGFS 610
Score = 211 bits (538), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 247/490 (50%), Gaps = 4/490 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ ++ + A+ K+ DL +QM + + +T +I+I+ CR + A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ LGY PN T++ LI+G C RV+E +++ M E P+ T+ +LV+G+
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGL-- 203
Query: 128 CLDPHKAFELLI--RFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
CL +A +L+ + +E + +L + + + A +LRKM +R ++
Sbjct: 204 CLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+ + L L+ + + +G+ TY +L+ AGR +G + L
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 323
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ K ++ NV +++++ID F K + A E+ +EM R IAP+ +T+ +LI G CK+
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ K +++ +++ G P+ TFN +I+ C+A+R +D L+ +M GV +T+TYN
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI+ C +G + + LFQ+M + ++ P+I T+ L+ C + EKA + F +
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ D Y+ +I + + + D+A F S+ G P T N+++ L ++G EA
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 486 DIVKTSKERG 495
+ + +E G
Sbjct: 564 LLFRKMEEDG 573
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 207/452 (45%), Gaps = 39/452 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ Y V++ + KS LA ++M K D Y+I+I G+C+ G +D A
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L +ME G N+ TY ILI GFCNA R + ++L M +R + PN T
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT------- 335
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F +LI +E EA + ++M RG P+
Sbjct: 336 ----------FSVLIDSFVKE------------------GKLREAEELHKEMIHRGIAPD 367
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T+ + L++ ++D + +G P T+ +L+ KA R +G
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +V++ +YN +I FC++ ++ A E+ +EM R + PN+VT+ L+ G C +
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E K E+ + + + D +N +I +C A + +DA D + GV P TYN
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 547
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+I LC G ++ + LF+KM+ D +PD +T+N LI++ K+ K +
Sbjct: 548 IMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRC 607
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
G D + +I ++ GR K++FL M
Sbjct: 608 GFSVDASTIKMVID-MLSDGRL---KKSFLDM 635
Score = 182 bits (461), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 227/482 (47%), Gaps = 3/482 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P+T ++ +I+ L + A +M KPD T N L++G+C G E
Sbjct: 152 LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAE 211
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+ +M G PN TY +++ C + + A +L M+ERN+ + ++
Sbjct: 212 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + AF L ME + +T ++ N L+ N + A +LR M R
Sbjct: 272 GLCKHGSLDNAFNLF-NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P TF + V L E + I RG+ P TY L++ K + ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
++ + N+ ++N++I+ +CK N +D E+ R+M R + + VT+NTLI G C+
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+++ +EL ++ P+ T+ ++D LC E AL+ ++ + + +
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YNI+I +C V + LF + + P + T+N +I C+ + +AE F M
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G PD ++Y+ LI+A + G ++ + +++ G + D+ T ++++ L GR +
Sbjct: 571 EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRLK 629
Query: 483 EA 484
++
Sbjct: 630 KS 631
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 218/482 (45%), Gaps = 40/482 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+S RL + ++D + ++IDL F+ M + P ++ L I + D L
Sbjct: 54 LSYRERLRSGLVD-IKADDAIDL----FRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVL 108
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L KQME G A N+YT +I+I+ FC +++ F + + + PN T +L++G+
Sbjct: 109 ALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGL 168
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
CL+ SEA ++ +M + G+ P+
Sbjct: 169 --CLEGR---------------------------------VSEALELVDRMVEMGHKPDL 193
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T + V L E ++D ++ G +P TY ++ + K+G+ L
Sbjct: 194 ITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + + + Y+++ID CK +D A + EM + I N++T+N LI G C
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+LL +++ P+ TF+ +ID + + +A + EM+ G+ P+TITY
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI C + ++ ++ M + P+I TFN LI +C+ N+I+ + F M G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ D +Y+ LI+ + G+ + AK+ F M P+ T ++L+ L G E+A
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493
Query: 486 DI 487
+I
Sbjct: 494 EI 495
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 160/363 (44%)
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A +L + PL + + L ++ A+ ++M +G T +
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
C L + IK G +P T+ L+ L GR E ++ + +
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
++ + N +++ C A + +M + PN VT+ +++ CK + ELL
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ E K D ++ +ID LC+ ++A + +EM G+ N ITYNILI C
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G +L + M +I+P++ TF+ LI SF + K+ +AE+ M+ G+ PD +Y
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
++LI K D+A Q M GC+P+ T N+++ + R ++ ++ +
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 431
Query: 494 RGI 496
RG+
Sbjct: 432 RGV 434
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 154/374 (41%), Gaps = 39/374 (10%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y+ +ID L K S+D A+ F +M + + TYNILI G C G D+ +L++ M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
PNV T+++LID F ++ E + + M R + P+ T SL+ G C + H
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF--CKENH 383
Query: 133 --KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
KA +++ + + N L+ + + + RKM RG + ++ T++
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ LN + + R V P TY +L++ L G + + K +
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 251 L-----------------------------------VSNVNSYNMVIDCFCKVNMMDRAT 275
+ V +YN++I CK + A
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 276 EICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCL 335
+ R+M + AP+ T+N LI H D + K+ +L+ L CGF D T +ID L
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Query: 336 CRAHRFEDALDCLS 349
+ LD LS
Sbjct: 624 SDGRLKKSFLDMLS 637
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 127/266 (47%), Gaps = 5/266 (1%)
Query: 236 DVEGDRYLNHVFKD----RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLV 291
D++ D ++ +F+D R + V ++ + K D +C++M + IA NL
Sbjct: 66 DIKADDAID-LFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLY 124
Query: 292 TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM 351
T + +I+ C+ ++ + +++ G++P+ TF+++I+ LC R +AL+ + M
Sbjct: 125 TLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRM 184
Query: 352 VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKI 411
VE G P+ IT N L+ LC G A ++ L KM P+ T+ ++ C+ +
Sbjct: 185 VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 244
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
A + M ++ D YS +I L K G D A F ME G + T N++
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Query: 472 LETLVQQGRFEEAHDIVKTSKERGIS 497
+ GR+++ +++ +R I+
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKIN 330
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 2/199 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ T YN +I + +++A FQ+M + P+ TY IL+ G+C G
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
++AL + +++E ++ Y I+I G CNA +V + + + + + V P T
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREP-LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
++ G+ + P ELL R ME + N L+ + A+++ ++ ++
Sbjct: 549 MIGGLCK-KGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRC 607
Query: 180 GYLPESSTFDYTVTCLVTG 198
G+ ++ST + L G
Sbjct: 608 GFSVDASTIKMVIDMLSDG 626
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 224/451 (49%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
+YNI+IH +C++G + EA L+ ME GY P+V +Y+ +++G+C + +V++++E+M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
K + + PN S++ + R +A E + + L +V TL+
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
A+ +M R P+ T+ ++ D+ E + +G++P T+ L
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ KAG + R NH+ + NV +Y +ID CK +D A E+ EM +
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN+ T+N++++G CK + + +L+ G D T+ +++D C++ + A +
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L EM+ G+ P +T+N+L+ C G + +L M A I+P+ TFN+L++ +C
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
N ++ A + M + G+ PD +Y L+K K+ EA F M+ G +
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T +++++ +++ +F EA ++ + G++
Sbjct: 668 TYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/477 (24%), Positives = 214/477 (44%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ + YN VI + + I A+ M + PD +Y+ +++G CR G +D+
Sbjct: 240 VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDK 299
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
+L++ M+ G PN Y Y +I C ++AE M + + P+ +L+
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G + D A + R+ L ++ EA + +M +G P
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+S TF + + + + + I+ G P TY L++ L K G + L
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ ++K L N+ +YN +++ CK ++ A ++ E + + VT+ TL+ +CK
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
E+ K +E+L +L G +P TFN +++ C ED L+ M+ G+ PN T+
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N L++ C ++ + +++ M + + PD T+ L++ C+ +++A F M
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
G +YS LIK +K +F EA++ F M + G D + +T + R
Sbjct: 660 KGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 716
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 138/244 (56%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV SYN+VI C++ + A + M + P++++++T+++G+C+ E+ K +L+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++ G KP+ + + S+I LCR + +A + SEM+ G+ P+T+ Y LI C
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
GD+ + + F +M + I+PD+ T+ A+I FC++ + +A K F M GL PD+ ++
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ LI K+G +A + M Q GC+P+ T +++ L ++G + A++++ +
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 494 RGIS 497
G+
Sbjct: 485 IGLQ 488
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 162/384 (42%), Gaps = 35/384 (9%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P T +Y +ID K I A F +M PD TY +I G C+IG + EA
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L +M G P+ T+T LI+G+C A + + FRV M + PN T +L+ G
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + D A ELL + N+++ L + EA ++ + G +
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T+ + ++++ IL + +G++P T+ +LM G +G++ LN
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAP------NLV------- 291
+ + N ++N ++ +C N + AT I ++M R + P NLV
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 292 ----------------------TFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
T++ LI G K + + RE+ + G DK F+
Sbjct: 646 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Query: 330 SMIDCLCRAHRFEDALDCLSEMVE 353
D + R + +D + E++E
Sbjct: 706 FFSDTKYKGKRPDTIVDPIDEIIE 729
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 124/280 (44%), Gaps = 11/280 (3%)
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI-----DC 264
T+ G PR + + + L G E R + LV +V+S N+ + DC
Sbjct: 167 TYKDWGSDPR--VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC 224
Query: 265 FCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPD 324
+ A + RE + + N+ ++N +I C+ + + LL+++ G+ PD
Sbjct: 225 YKTAT----AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD 280
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
+++++++ CR + + M G+ PN+ Y +I LC I +A + F
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS 340
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+M I PD + LI FC+ I A K F+ M + + PD +Y+A+I + G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
EA + F M G PDS T ++ + G ++A
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Query: 353 EWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR-MNKI 411
+WG P +++ + L G + + R+F+KM + + + N + + K
Sbjct: 170 DWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 227
Query: 412 EKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
A F +G+ + SY+ +I + + GR EA L ME G PD + + +
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 472 LETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ + G ++ +++ K +G+ S+
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSY 317
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 239/495 (48%), Gaps = 7/495 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS YN ++ L K +D A F++M D P+ TYNILI +CR G +D A
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTA 396
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L M+ G PNV T I++D C ++++ E + E M + P+E T SL+ G
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A+++ + ++ + T +V +L+ N+ + I + M ++ P+
Sbjct: 457 LGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + C+ + + + + R P +Y +L+ L KAG E
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + V + +YN+VID FCK +++A ++ EM+ + P +VT+ ++I G A
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL---A 633
Query: 305 EVHKTRELLVMLLECGFKPDKFT---FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
++ + E ++ E K + ++S+ID + R ++A L E+++ G+ PN
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
T+N L+ +L ++ +L FQ M+ + +P+ T+ LI C++ K KA + M
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
G++P SY+ +I L K+G EA F + NG PDS N ++E L R
Sbjct: 754 QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRA 813
Query: 482 EEAHDIVKTSKERGI 496
+A + + ++ RG+
Sbjct: 814 MDAFSLFEETRRRGL 828
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 224/492 (45%), Gaps = 1/492 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P Y ++I L K+N +D A F+ + ++ P + YN +I G G DEA
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+++ G P+V Y ++ +V E +V E MK ++ PN +T L+
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDM 386
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ R AFEL + N ++ RL + EA A+ +M + P+
Sbjct: 387 LCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPD 446
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + L +++ + + + + Y L++ + GR +G +
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++ N +DC K ++ + E++ R P+ +++ LI G K
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++T EL + E G D +N +ID C+ + A L EM G P +TY
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I L I + + LF++ ++ RI ++ +++LI F ++ +I++A ++
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL P+ +++++L+ AL+K+ +EA F SM++ C P+ T +++ L + +F +A
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 485 HDIVKTSKERGI 496
+ +++G+
Sbjct: 747 FVFWQEMQKQGM 758
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 206/445 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ R N ++D L KS +D A F++M C PD T+ LI G+ ++G VD+A
Sbjct: 407 GLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDA 466
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ ++M N YT LI F N R + ++ + M +N P+ + + +
Sbjct: 467 YKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDC 526
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F+ +P K + R + + L++ L A+E + M ++G + +
Sbjct: 527 MFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLD 586
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ ++ + +N+ +L+ +G +P TY +++ L K R E
Sbjct: 587 TRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE 646
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
R+ NV Y+ +ID F KV +D A I E+ + + PNL T+N+L+ K
Sbjct: 647 EAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAE 706
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
E+++ + E P++ T+ +I+ LC+ +F A EM + G+ P+TI+Y
Sbjct: 707 EINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYT 766
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+I L G++A + LF + +A+ PD +NA+I+ N+ A F
Sbjct: 767 TMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRR 826
Query: 425 GLRPDNFSYSALIKALIKSGRFDEA 449
GL N + L+ L K+ ++A
Sbjct: 827 GLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 162 bits (409), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 215/498 (43%), Gaps = 7/498 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G PS ++ VK+N + Y Q M + +P Y LI +
Sbjct: 124 MSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNH 183
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
D L L +QM+ LGY P V+ +T LI GF RV +L+ MK ++ +
Sbjct: 184 SDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNV 243
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+ + A++ ++ +++ L + EA + +
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+P + ++ + + +E +L+ +G P Y ++ L K G+ E
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEAL 363
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + KD N+++YN++ID C+ +D A E+ M+ + PN+ T N ++
Sbjct: 364 KVFEEMKKD-AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRL 422
Query: 301 CKDAEVHKTRELLVMLLECGFK---PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
CK K E M E +K PD+ TF S+ID L + R +DA +M++
Sbjct: 423 CKS---QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
N+I Y LI++ G ++++ M SPD+ N + + + EK
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F + PD SYS LI LIK+G +E + F SM++ GC D+ N++++ +
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 478 QGRFEEAHDIVKTSKERG 495
G+ +A+ +++ K +G
Sbjct: 600 CGKVNKAYQLLEEMKTKG 617
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/458 (23%), Positives = 205/458 (44%), Gaps = 21/458 (4%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
+YN L+ + R D +++ +M G+ P+V T ++ G A ++ E + V+++M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMER---EPLTQKLVCNTLLYRLSNN 163
++ P + +L+ G F ++ L + M+ EP + TL+ +
Sbjct: 160 RKFKFRPAFSAYTTLI-GAFSAVNHSDMMLTLFQQMQELGYEPTVH--LFTTLIRGFAKE 216
Query: 164 SMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK-------RGV 216
A ++L +M +SS+ D + +D G +D K G+
Sbjct: 217 GRVDSALSLLDEM-------KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
KP TY ++ L KA R E H+ K+R V +YN +I + D A
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 329
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
+ R + P+++ +N +++ K +V + ++ + + P+ T+N +ID LC
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLC 388
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
RA + + A + M + G+ PN T NI++ LC + + +F++M +PD
Sbjct: 389 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
TF +LI ++ +++ A K + ML R ++ Y++LIK GR ++ + + M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
C+PD N ++ + + G E+ + + K R
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR 546
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 138/305 (45%), Gaps = 12/305 (3%)
Query: 201 LNETCGILDT----------FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+N+ C +L+T KP+ + ++ L R +E R+ +
Sbjct: 36 VNDICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYER--RTE 93
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
L SYN ++ + D +I EM P++ T ++ G K ++ +
Sbjct: 94 LPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGY 153
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+++ M+ + F+P + ++I + + L +M E G P + LIR
Sbjct: 154 DVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGF 213
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
G V +L L +M++ + DI +N I SF ++ K++ A K F + GL+PD
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+Y+++I L K+ R DEA + F +E+N P +Y N ++ G+F+EA+ +++
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 491 SKERG 495
+ +G
Sbjct: 334 QRAKG 338
Score = 92.4 bits (228), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++P+ +N+++DALVK+ I+ A + FQ M +C P++ TY ILI+G+C++ ++A
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++M+ G P+ +YT +I G A +AE + + K P+ A +++ G
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA---AILRKMG 177
+ AF L R C LL L N +AA A+LR+ G
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 245/494 (49%), Gaps = 6/494 (1%)
Query: 8 PSTRL--YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
P RL ++ + + ++ DL +QM + + +T +I+I+ CR + A
Sbjct: 68 PRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAF 127
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ ++ LGY P+ T++ LI+G C RV+E +++ M E P T+ +LV+G+
Sbjct: 128 SAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGL 187
Query: 126 FRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
CL+ A L+ R +E ++ +L + + + A +LRKM +R
Sbjct: 188 --CLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL 245
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ + + L L+ + + +G K Y L+ AGR +G + L
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ K ++ +V +++ +IDCF K + A E+ +EM R I+P+ VT+ +LI G CK+
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ K +L +++ G P+ TFN +I+ C+A+ +D L+ +M GV +T+TY
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
N LI+ C +G + + LFQ+M + R+ PDI ++ L+ C + EKA + F +
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+ D Y+ +I + + + D+A F S+ G PD T N+++ L ++G E
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545
Query: 484 AHDIVKTSKERGIS 497
A + + +E G S
Sbjct: 546 ADLLFRKMEEDGHS 559
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 238/493 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ + + +I+ + + LA+ ++ +PD T++ LI+G+C G V EA
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L LV +M +G+ P + T L++G C +V++ +++ M E PNE T ++
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV 221
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A ELL + ER+ + + ++ L + A + +M +G+ +
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 281
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ + ++ +L IKR + P + L++ K G+ E +
Sbjct: 282 IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHK 341
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + + +Y +ID FCK N +D+A + M + PN+ TFN LI+G+CK
Sbjct: 342 EMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN 401
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ EL + G D T+N++I C + E A + EMV V P+ ++Y
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
IL+ LC G+ ++L +F+K++ ++ DI +N +I C +K++ A F S+
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G++PD +Y+ +I L K G EA F ME++G +P+ T N+++ + +G ++
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581
Query: 485 HDIVKTSKERGIS 497
+++ K G S
Sbjct: 582 AKLIEEIKRCGFS 594
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/481 (24%), Positives = 223/481 (46%), Gaps = 1/481 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P T ++ +I+ L + A +M KP T N L++G+C G V +
Sbjct: 136 LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSD 195
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+ +M G+ PN TY ++ C + + A +L M+ER + + ++
Sbjct: 196 AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIID 255
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + AF L + ++ TL+ + A +LR M R P
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ F + C V L E + I+RG+ P TY L++ K + + + L
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + N+ ++N++I+ +CK N++D E+ R+M R + + VT+NTLI G C+
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ +EL ++ +PD ++ ++D LC E AL+ ++ + + + Y
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI+I +C V + LF + + PD+ T+N +I C+ + +A+ F M
Sbjct: 496 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
G P+ +Y+ LI+A + G ++ + +++ G + D+ T ++++ L GR ++
Sbjct: 556 DGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRLKK 614
Query: 484 A 484
+
Sbjct: 615 S 615
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 223/482 (46%), Gaps = 40/482 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+S RL + ++D + + +++DL FQ+M+ + +P ++ L + R D L
Sbjct: 38 VSYRERLRSGIVD-IKEDDAVDL----FQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVL 92
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L KQME G A N+YT +I+I+ C ++++ F + + + P+ T +L++G+
Sbjct: 93 DLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGL 152
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
CL+ SEA ++ +M + G+ P
Sbjct: 153 --CLEGR---------------------------------VSEALELVDRMVEMGHKPTL 177
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T + V L +++ ++D ++ G +P TY +++ + K+G+ L
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + ++ + Y+++ID CK +D A + EM + +++ + TLI G C
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+LL +++ PD F+++IDC + + +A + EM++ G+ P+T+TY
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI C + ++ + M + P+I TFN LI +C+ N I+ + F M G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ D +Y+ LI+ + G+ + AK+ F M PD + ++L+ L G E+A
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 486 DI 487
+I
Sbjct: 478 EI 479
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 150/372 (40%), Gaps = 35/372 (9%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y+ +ID L K S+D A+ F +M + K D Y LI G C G D+ +L++ M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
P+V ++ LID F ++ E + + M +R + P+ T SL+ G +
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
KA +L + + N L+ ++ + + RKM RG + ++ T++ +
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL- 251
L + + R V+P +Y +L++ L G + + K ++
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 252 ----------------------------------VSNVNSYNMVIDCFCKVNMMDRATEI 277
+V +YN++I CK + A +
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549
Query: 278 CREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR 337
R+M + +PN T+N LI H + + K+ +L+ + CGF D T ++D L
Sbjct: 550 FRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSD 609
Query: 338 AHRFEDALDCLS 349
+ LD LS
Sbjct: 610 GRLKKSFLDMLS 621
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 106/224 (47%)
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
D A ++ +EM P L+ F+ L S + + +L + G + +T + M
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
I+C CR + A + ++++ G P+T+T++ LI LC G V+ +L L +M
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
P + T NAL+ C K+ A M+ G +P+ +Y ++K + KSG+ A +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
ME+ D+ ++I++ L + G + A ++ + +G
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 97/199 (48%), Gaps = 2/199 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ T YN +I + +++A FQ+M + +PD +Y IL+ G+C G
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
++AL + +++E ++ Y I+I G CNA +V + + + + + V P+ T
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLS-NNSMASEAAAILRKMGDR 179
++ G+ + +A +LL R ME + + +L R A+++A ++ ++
Sbjct: 533 MIGGLCKKGSLSEA-DLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRC 591
Query: 180 GYLPESSTFDYTVTCLVTG 198
G+ ++ST V L G
Sbjct: 592 GFSVDASTVKMVVDMLSDG 610
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 240/490 (48%), Gaps = 4/490 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ +N + A+ K+ +L +QM +T +I+I+ CR + A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ LGY P+ + L++G C RV+E +++ M E P T+ +LV+G+
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGL-- 203
Query: 128 CLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
CL+ A L+ R +E ++ +L + + + A +LRKM +R ++
Sbjct: 204 CLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+ + L L+ + + +G K TY L+ AGR +G + L
Sbjct: 264 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD 323
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ K ++ NV +++++ID F K + A ++ +EM R IAPN +T+N+LI G CK+
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + +++ +++ G PD TFN +I+ C+A+R +D L+ EM GV NT+TYN
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L++ C G + + +LFQ+M + R+ PDI ++ L+ C ++EKA + F +
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ D Y +I + + + D+A F S+ G D+ N+++ L ++ +A
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563
Query: 486 DIVKTSKERG 495
+ + E G
Sbjct: 564 ILFRKMTEEG 573
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 230/470 (48%), Gaps = 4/470 (0%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F+ M + P +N L I + + L L KQME G A ++YT +I+I+ FC
Sbjct: 76 FRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCR 135
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD--PHKAFELLIRFMEREPLTQK 150
++++ F + + + P+ +L++G+ CL+ +A EL+ R +E
Sbjct: 136 CRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGL--CLECRVSEALELVDRMVEMGHKPTL 193
Query: 151 LVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 210
+ NTL+ L N S+A ++ +M + G+ P T+ + + +L
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 211 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 270
+R +K Y ++++ L K G N + +++ +YN +I FC
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 330
D ++ R+M R I+PN+VTF+ LI K+ ++ + +LL +++ G P+ T+NS
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
+ID C+ +R E+A+ + M+ G P+ +T+NILI C + L LF++M
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ + T+N L+Q FC+ K+E A+K F M++ +RPD SY L+ L +G ++A
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL 493
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+ F +E++ D +I+ + + ++A D+ + +G+ +
Sbjct: 494 EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA 543
Score = 195 bits (495), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 236/491 (48%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ S + +I+ + + A+ ++ +PD +N L++G+C V EA
Sbjct: 118 GIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEA 177
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L LV +M +G+ P + T L++G C +V++ +++ M E PNE T +++
Sbjct: 178 LELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNV 237
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A ELL + ER + + ++ L + A + +M +G+ +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 297
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + ++ +L IKR + P T+ +L+++ K G+ E D+ L
Sbjct: 298 IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + N +YN +ID FCK N ++ A ++ M + P+++TFN LI+G+CK
Sbjct: 358 EMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKAN 417
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ EL + G + T+N+++ C++ + E A EMV V P+ ++Y
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
IL+ LC G++ ++L +F K++ ++ DI + +I C +K++ A F S+
Sbjct: 478 ILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G++ D +Y+ +I L + +A F M + G PD T N+++ + A
Sbjct: 538 GVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTA 597
Query: 485 HDIVKTSKERG 495
++++ K G
Sbjct: 598 AELIEEMKSSG 608
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 226/491 (46%), Gaps = 4/491 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P T ++N +++ L + A +M KP T N L++G+C G V +
Sbjct: 152 LGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSD 211
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+ +M G+ PN TY +++ C + + A +L M+ERN+ + ++
Sbjct: 212 AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G+ + AF L ME + ++ NTL+ N + A +LR M R
Sbjct: 272 GLCKDGSLDNAFNLF-NEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P TF + V L E +L ++RG+ P TY L++ K R E +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
++ + ++ ++N++I+ +CK N +D E+ REM R + N VT+NTL+ G C+
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ ++L ++ +PD ++ ++D LC E AL+ ++ + + +
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y I+I +C V + LF + + D +N +I CR + + KA+ F M
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
G PD +Y+ LI+A + A + M+ +G D T +++ L G +
Sbjct: 571 EEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML-SSGELD 629
Query: 483 EAH-DIVKTSK 492
++ D++ T++
Sbjct: 630 KSFLDMLSTTR 640
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 100/224 (44%)
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
D A ++ R+M P ++ FN L S K + L + G +T + M
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
I+C CR + A + ++++ G P+T+ +N L+ LC V+ +L L +M
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
P + T N L+ C K+ A M+ G +P+ +Y ++ + KSG+ A +
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
ME+ D+ ++I++ L + G + A ++ + +G
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 93/198 (46%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ +T YN ++ +S +++A FQ+M + +PD +Y IL+ G+C G
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++AL + ++E ++ Y I+I G CNA +V + + + + + V +
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNI 548
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ + R KA L + E +L N L+ + A+ AA ++ +M G
Sbjct: 549 MISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG 608
Query: 181 YLPESSTFDYTVTCLVTG 198
+ + ST + L +G
Sbjct: 609 FPADVSTVKMVINMLSSG 626
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 205 bits (522), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 239/488 (48%), Gaps = 3/488 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ A+ K N +L +QM D +TY+I I+ CR + AL +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P++ T + L++G+C++KR+++ +++ M E P+ T +L+HG+F
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+A L+ + ++R + T++ L A +L KM
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
F+ + L + + +G++P TY L+ L GR + R L+++
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ ++ NV ++N +ID F K + A ++ EM R I P+ +T+N LI+G C +
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+ +++ ++ P+ T+N++I+ C+ R ED ++ EM + G+ NT+TY +I
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
+ GD + +F++M ++R+ DI T++ L+ C K++ A F + +
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+ F Y+ +I+ + K+G+ EA F S+ PD T N ++ L + +EA D+
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDL 557
Query: 488 VKTSKERG 495
+ KE G
Sbjct: 558 FRKMKEDG 565
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/492 (25%), Positives = 241/492 (48%), Gaps = 3/492 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGIS Y+ I+ + + + LA +M +PD T + L++G C + +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ LV QM +GY P+ +T+T LI G + +E +++ M +R P+ T ++V+
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + D A LL + ++ NT++ L A + +M +G P
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + CL ++ +L +++ + P T+ L++A +K G+ VE ++
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + + + +YN++I+ FC N +D A ++ + M +D PN+ T+NTLI+G CK
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
V EL + + G + T+ ++I +A + A +MV VP + +TY
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
+IL+ LC+ G + +L +F+ +Q + +I+ +N +I+ C+ K+ +A F S
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCS--- 528
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
L ++PD +Y+ +I L EA F M+++G P+S T N ++ ++
Sbjct: 529 LSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAA 588
Query: 484 AHDIVKTSKERG 495
+ +++K + G
Sbjct: 589 SAELIKEMRSSG 600
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 231/494 (46%), Gaps = 49/494 (9%)
Query: 2 SFLGISPSTR--LYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
SF S R L N + D + +++DL F M + P +N L+ + ++
Sbjct: 42 SFASASGDYREILRNRLSDIIKVDDAVDL----FGDMVKSRPFPSIVEFNKLLSAVAKMN 97
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+ + L +QM+ LG + ++YTY+I I+ FC +++ VL M + P+ T+
Sbjct: 98 KFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS 157
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
SL++G C++ S+A A++ +M +
Sbjct: 158 SLLNG---------------------------YCHS--------KRISDAVALVDQMVEM 182
Query: 180 GYLPESSTFDYTVTCLVTGLDLN----ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
GY P++ TF T L+ GL L+ E ++D ++RG +P TY ++ L K G
Sbjct: 183 GYKPDTFTF----TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
LN + R+ +NV +N +ID CK ++ A ++ EM + I PN+VT+N+
Sbjct: 239 IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS 298
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
LI+ C LL +LE P+ TFN++ID + + +A EM++
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
+ P+TITYN+LI C + + ++F+ M + P+I T+N LI FC+ ++E
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV 418
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETL 475
+ F M GL + +Y+ +I+ ++G D A+ F M N D T +++L L
Sbjct: 419 ELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478
Query: 476 VQQGRFEEAHDIVK 489
G+ + A I K
Sbjct: 479 CSYGKLDTALVIFK 492
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 192/419 (45%), Gaps = 7/419 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P Y V++ L K IDLA +M + K + +N +I +C+ V+ A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L +ME G PNV TY LI+ CN R ++ R+L M E+ + PN T +L+
Sbjct: 278 VDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDA 337
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
F+ +A +L ++R + N L+ ++ EA + + M + LP
Sbjct: 338 FFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + + + + +RG+ TY +++ ++AG
Sbjct: 398 IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK 457
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ +R+ +++ +Y++++ C +D A I + ++ ++ N+ +NT+I G CK
Sbjct: 458 QMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAG 517
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V + +L L KPD T+N+MI LC ++A D +M E G PN+ TYN
Sbjct: 518 KVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYN 574
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
LIR+ D A S L ++M++ D T I M + +K+F +ML+
Sbjct: 575 TLIRANLRDCDRAASAELIKEMRSSGFVGDAST----ISLVTNMLHDGRLDKSFLNMLS 629
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 134/240 (55%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
+Y++ I+CFC+ + + A + +M P++VT ++L++G+C + L+ +
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
+E G+KPD FTF ++I L ++ +A+ + +MV+ G P+ +TY ++ LC GD+
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
+L L KM+A RI ++ FN +I S C+ +E A F M T G+RP+ +Y++L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
I L GR+ +A + +M + NP+ T N +++ ++G+ EA + + +R I
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 162/369 (43%), Gaps = 45/369 (12%)
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLS-------NNSMASEAAAILRKMGDRGYLPESST 187
FEL+I E+ Q L + LY S S S A A+L KM GY P+ T
Sbjct: 99 FELVISLGEQ---MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 155
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ +++ ++D ++ G KP T+ L+ L+ + E
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE--------- 206
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
A + +M R P+LVT+ T+++G CK ++
Sbjct: 207 --------------------------AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
LL + K + FN++ID LC+ E A+D +EM G+ PN +TYN LI
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G + + RL M +I+P++ TFNALI +F + K+ +AEK M+ +
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
PD +Y+ LI R DEAKQ F M C P+ T N ++ + R E+ ++
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 488 VKTSKERGI 496
+ +RG+
Sbjct: 421 FREMSQRGL 429
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ +DA+D +MV+ P+ + +N L+ ++ + + L ++MQ IS D+YT++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
I FCR +++ A M+ LG PD + S+L+ S R +A M +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
G PD++T ++ L + EA +V +RG
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 55/137 (40%)
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
IL L I V ++ LF M R P I FN L+ + +MNK E M TL
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ D ++YS I + + A M + G PD T + +L R +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 485 HDIVKTSKERGISFKSF 501
+V E G +F
Sbjct: 173 VALVDQMVEMGYKPDTF 189
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 226/465 (48%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F++M C+P F+YN ++ + G D+A ++ +M G P+VY++TI + FC
Sbjct: 99 FERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCK 158
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
R R+L M + N ++V G + + +EL + +
Sbjct: 159 TSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLST 218
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
N LL L E +L K+ RG LP T++ + L +L+ ++ I
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI 278
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
++G KP TY L+ L K + E + YL + + L + +YN +I +CK M+
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A I + P+ T+ +LI G C + E ++ L L G KP+ +N++I
Sbjct: 339 LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
L +A +EM E G+ P T+NIL+ LC +G V+ + L + M +
Sbjct: 399 KGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF 458
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
PDI+TFN LI + K+E A + ML G+ PD ++Y++L+ L K+ +F++ +T
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ +M + GC P+ +T N++LE+L + + +EA +++ K + ++
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVN 563
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/602 (24%), Positives = 251/602 (41%), Gaps = 106/602 (17%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F P+ YNA++ LV S D A+ + +M PD +++ I + C+
Sbjct: 102 MDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSR 161
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGF------------------------------ 90
ALRL+ M G NV Y ++ GF
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNK 221
Query: 91 -----CNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
C V E ++L+ + +R V PN T + G+ + + A ++ +E+
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFD---------------- 189
P + N L+Y L NS EA L KM + G P+S T++
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341
Query: 190 ---------------YTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
+T L+ GL + N + + + +G+KP Y L++ L
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
G +E + N + + L+ V ++N++++ CK+ + A + + M + P++
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
TFN LI G+ ++ E+L ++L+ G PD +T+NS+++ LC+ +FED ++
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCR--- 407
MVE G PN T+NIL+ SLC + +L L ++M+ ++PD TF LI FC+
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 408 -------MNKIEKA--------------------------EKAFFSMLTLGLRPDNFSYS 434
K+E+A EK F M+ L PD ++Y
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
++ K+G + + L M +NG P T ++ L + R EA I+ ++
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 495 GI 496
G+
Sbjct: 702 GL 703
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 210/462 (45%), Gaps = 1/462 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN I L + +D A + KPD TYN LI+G+C+ EA
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M G P+ YTY LI G+C V R++ P++ T RSL+ G
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + ++A L + + ++ NTL+ LSN M EAA + +M ++G +PE
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ V L +++ G++ I +G P T+ +L+ + L+
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + +V +YN +++ CK + + E + M ++ APNL TFN L+ C+
Sbjct: 486 VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYR 545
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE-WGVPPNTITY 363
++ + LL + PD TF ++ID C+ + A +M E + V +T TY
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTY 605
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NI+I + +V + +LFQ+M + PD YT+ ++ FC+ + K M+
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME 665
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
G P + +I L R EA M Q G P++
Sbjct: 666 NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 203/439 (46%)
Query: 57 RIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEA 116
R G V EA+ + ++M+ P V++Y ++ ++ + +V M++R + P+
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 117 TVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
+ + + PH A LL + + T++ + +E + KM
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
G STF+ + L D+ E +LD IKRGV P TY L ++ L + G
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
R + + + +V +YN +I CK + A +M + + P+ T+NTL
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
I+G+CK V ++ + GF PD+FT+ S+ID LC AL +E + G+
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
PN I YN LI+ L G + + +L +M + P++ TFN L+ C+M + A+
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
M++ G PD F+++ LI + + A + M NG +PD YT N +L L
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Query: 477 QQGRFEEAHDIVKTSKERG 495
+ +FE+ + KT E+G
Sbjct: 508 KTSKFEDVMETYKTMVEKG 526
Score = 141 bits (356), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 167/361 (46%), Gaps = 3/361 (0%)
Query: 3 FLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
F G P Y ++ID L + A F + KP+ YN LI G+ G++
Sbjct: 349 FNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMIL 408
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
EA +L +M G P V T+ IL++G C V++ ++++M + P+ T L+
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
HG L A E+L ++ N+LL L S + + M ++G
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P TF+ + L L+E G+L+ + V P T+ L++ K G D++G
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG-DLDGAYT 587
Query: 243 LNHVFKD--RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
L ++ ++ S+ +YN++I F + + A ++ +EM DR + P+ T+ ++ G
Sbjct: 588 LFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK V+ + L+ ++E GF P T +I+CLC R +A + MV+ G+ P
Sbjct: 648 CKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Query: 361 I 361
+
Sbjct: 708 V 708
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 123/295 (41%), Gaps = 15/295 (5%)
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDRYL--------NHVFKDRLVSNVNSYNMVIDCFC 266
G K STY ++E L G+ + L NH+ + V + +Y
Sbjct: 35 GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYG------- 87
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
+ + A + M D P + ++N ++S + ++ + + + G PD +
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
+F + C+ R AL L+ M G N + Y ++ A LF KM
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
A +S + TFN L++ C+ +++ EK ++ G+ P+ F+Y+ I+ L + G
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
D A + + + G PD T N ++ L + +F+EA + G+ S+
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 6/167 (3%)
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE-WGVPPNTITYNILIRSLCAIGDV 376
E GFK T+ S+I+ L +FE + L +M E G Y +++ G V
Sbjct: 33 EVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKV 92
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
++ +F++M P ++++NA++ ++A K + M G+ PD +S++
Sbjct: 93 QEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIR 152
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEE 483
+K+ K+ R A + +M GC N++ V G +EE
Sbjct: 153 MKSFCKTSRPHAALRLLNNMSSQGCE-----MNVVAYCTVVGGFYEE 194
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 241/491 (49%), Gaps = 1/491 (0%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ ++ A+ K N DL +QM + +TY+I I+ CR + AL +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P++ T L++GFC+ R++E +++ M E P+ T +LVHG+F+
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
+A L+ R + + + ++ L A +L KM +
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ + L +++ + + +G+KP TY L+ L GR + R L+ +
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM-RDRDIAPNLVTFNTLISGHCKDAEV 306
+ + ++ +N +ID F K + A ++ EM + + P++V +NTLI G CK V
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ E+ + + G + T+ ++I +A ++A +MV GV P+ +TYNIL
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ LC G+V +L +F+ MQ + DI T+ +I++ C+ K+E F S+ G+
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+P+ +Y+ ++ + G +EA F+ M+++G P+S T N ++ ++ G + +
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAE 552
Query: 487 IVKTSKERGIS 497
++K + G +
Sbjct: 553 LIKEMRSCGFA 563
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 230/484 (47%), Gaps = 6/484 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGIS + Y+ I+ + + + LA +M P T N L++G C + E
Sbjct: 104 LGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 163
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ LV QM +GY P+ T+T L+ G + +E ++E M + P+ T ++++
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +P A LL + + + ++ NT++ L +A + KM +G P
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T++ ++CL ++ +L +++ + P + L++A K G+ VE ++
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 244 NHVFKDR-LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ + K + +V +YN +I FCK ++ E+ REM R + N VT+ TLI G +
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + + ++ G PD T+N ++D LC E AL M + + + +T
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y +I +LC G V LF + + P++ T+ ++ FCR E+A+ F M
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN--PDSYTSNLILETLVQQGR 480
G P++ +Y+ LI+A ++ G DEA L E C D+ T L+ ++ GR
Sbjct: 524 EDGPLPNSGTYNTLIRARLRDG--DEAASAELIKEMRSCGFAGDASTFGLV-TNMLHDGR 580
Query: 481 FEEA 484
+++
Sbjct: 581 LDKS 584
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 147/290 (50%), Gaps = 2/290 (0%)
Query: 199 LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS-NVNS 257
L L++ G+ +K P + L+ A+ K + + L ++ +S N+ +
Sbjct: 54 LKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNK-FDLVISLGEQMQNLGISHNLYT 112
Query: 258 YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLL 317
Y++ I+ FC+ + + A I +M P++VT N+L++G C + + L+ ++
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
E G++PD TF +++ L + ++ +A+ + MV G P+ +TY +I LC G+
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+L L KM+ +I D+ +N +I C+ ++ A F M T G++PD F+Y+ LI
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
L GR+ +A + M + NPD N +++ V++G+ EA +
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Score = 125 bits (314), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 154/345 (44%), Gaps = 1/345 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I +YN +ID L K +D A+ F +M KPD FTYN LI +C G +A
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL-EIMKERNVCPNEATVRSLVHG 124
RL+ M P++ + LID F ++ E ++ E++K ++ P+ +L+ G
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + E+ +R + + TL++ A + ++M G P+
Sbjct: 366 FCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L ++ + + KR +K TY ++EAL KAG+ +G
Sbjct: 426 IMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFC 485
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + NV +Y ++ FC+ + + A + EM++ PN T+NTLI +D
Sbjct: 486 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS 349
+ + EL+ + CGF D TF + + L + LD LS
Sbjct: 546 DEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFLDMLS 590
Score = 38.9 bits (89), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 40/88 (45%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P+ Y ++ + + A F +M D P+ TYN LI R G
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGD 546
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILID 88
+ L+K+M G+A + T+ ++ +
Sbjct: 547 EAASAELIKEMRSCGFAGDASTFGLVTN 574
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 234/485 (48%), Gaps = 5/485 (1%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
RL + ++D + K ++I L FQ+M + P ++ I R + L KQ
Sbjct: 59 RLRSGIVD-IKKDDAIAL----FQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQ 113
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
+E G A N+YT I+I+ FC + + VL + + P+ T +L+ G+F
Sbjct: 114 LELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGK 173
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
+A L+ R +E + N+++ + + S A +LRKM +R + T+
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ L ++ + +G+K TY L+ L KAG+ +G L +
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+V NV ++N+++D F K + A E+ +EM R I+PN++T+NTL+ G+C + +
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+L +++ PD TF S+I C R +D + + + G+ N +TY+IL++
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C G + + LFQ+M + + PD+ T+ L+ C K+EKA + F + +
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
Y+ +I+ + K G+ ++A F S+ G P+ T +++ L ++G EA+ +++
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 491 SKERG 495
+E G
Sbjct: 534 MEEDG 538
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 231/490 (47%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ A+ ++ +L +Q+ ++ + +T NI+I+ CR A +
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ ++ LGY P+ T+ LI G +V+E +++ M E P+ T S+V+G+ R
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D A +LL + ER +T++ L + A ++ ++M +G T
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
++ V L N+ +L + R + P T+ +L++ K G+ E + +
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ N+ +YN ++D +C N + A + M +P++VTF +LI G+C V
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
++ + + G + T++ ++ C++ + + A + EMV GV P+ +TY IL+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G + ++L +F+ +Q ++ I + +I+ C+ K+E A F S+ G++
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
P+ +Y+ +I L K G EA ME++G P+ T N ++ ++ G + +
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 488 VKTSKERGIS 497
++ K G S
Sbjct: 566 IEEMKSCGFS 575
Score = 181 bits (460), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 214/453 (47%), Gaps = 4/453 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG P T +N +I L + A + +M + C+PD TYN +++GICR G
Sbjct: 152 LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 211
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL L+++ME +V+TY+ +ID C + + + M+ + + + T SLV
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + + LL + RE + + N LL EA + ++M RG P
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + L+E +LD ++ P T+ L++ R +G +
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
++ K LV+N +Y++++ FC+ + A E+ +EM + P+++T+ L+ G C +
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
++ K E+ L + + ++I+ +C+ + EDA + + GV PN +TY
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
++I LC G ++ + L +KM+ D +P+ T+N LI++ R + + K M +
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
G D S +I L+ SG D ++FL M
Sbjct: 572 CGFSADASSIKMVIDMLL-SGELD---KSFLDM 600
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 221/476 (46%), Gaps = 6/476 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+ + N +I+ + AY ++ +PD T+N LI G+ G V EA
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ LV +M G P+V TY +++G C + + +L M+ERNV + T +++
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 125 VFR--CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ R C+D + L + ME + + +V N+L+ L ++ A +L+ M R
Sbjct: 238 LCRDGCIDAAIS---LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+P TF+ + V L E + I RG+ P TY LM+ R E +
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L+ + +++ ++ ++ +I +C V +D ++ R + R + N VT++ L+ G C
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+ ++ EL ++ G PD T+ ++D LC + E AL+ ++ + + +
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
Y +I +C G V + LF + + P++ T+ +I C+ + +A M
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
G P++ +Y+ LI+A ++ G + + M+ G + D+ + ++++ L+
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 590
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%)
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+DA+ EM+ P+ + ++ ++ L ++++ + I+ +IYT N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGC 461
I FCR K A ++ LG PD +++ LIK L G+ EA M +NGC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 462 NPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
PD T N I+ + + G A D+++ +ER + F
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF 229
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS G+ + Y+ ++ +S I LA FQ+M PD TY IL+ G+C G
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+++AL + + ++ + YT +I+G C +V + + + + + V PN T
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
++ G+ + +A LL + E NTL+ + + +A ++ +M G
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Query: 181 YLPESSTFDYTVTCLVTG 198
+ ++S+ + L++G
Sbjct: 574 FSADASSIKMVIDMLLSG 591
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 197 bits (501), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 224/474 (47%), Gaps = 39/474 (8%)
Query: 23 SNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYT 82
+++IDL F M + P +N L+ I ++ D + L K+ME LG ++YT
Sbjct: 67 NDAIDL----FSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122
Query: 83 YTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFM 142
+ I+I+ FC +V+ +L M + P+ T+ SLV+G R
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR--------------- 167
Query: 143 EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLN 202
+ S+A +++ KM + GY P+ ++ + L +N
Sbjct: 168 --------------------RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 203 ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVI 262
+ ++G++P TY L+ L + R + R L+ + K ++ NV +Y+ ++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 263 DCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFK 322
D F K + A E+ EM I P++VT+++LI+G C + + ++ +++ G
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
D ++N++I+ C+A R ED + EM + G+ NT+TYN LI+ GDV ++
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
F +M ISPDI+T+N L+ C ++EKA F M + D +Y+ +I+ + K
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+G+ +EA F S+ G PD T ++ L +G E + K+ G+
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 168 bits (426), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 209/446 (46%), Gaps = 10/446 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS +N ++ A+VK D+ ++M V + D +T+NI+I+ C V AL +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P+ T L++GFC RV++ +++ M E P+ +++ + +
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYLPESS 186
+ AF+ + +ER+ + +V T L L N+S S+AA +L M + P
Sbjct: 203 TKRVNDAFDFF-KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T+ + V + E + + ++ + P TY L+ L R E ++ + +
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
+++V SYN +I+ FCK ++ ++ REM R + N VT+NTLI G + +V
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
K +E + G PD +T+N ++ LC E AL +M + + + +TY +
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
IR +C G V + LF + + PDI T+ ++ C + + E + M GL
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Query: 427 RPDNFSYS--------ALIKALIKSG 444
++ + S LIK ++ G
Sbjct: 502 MKNDCTLSDGDITLSAELIKKMLSCG 527
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 132/280 (47%), Gaps = 35/280 (12%)
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
+++ ++N+VI+CFC + A I +M P+ VT +L++G C+ V L
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 313 LVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD-------------------------- 346
+ ++E G+KPD +N++ID LC+ R DA D
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 347 ---------CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYT 397
LS+M++ + PN ITY+ L+ + G V + LF++M I PDI T
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 398 FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME 457
+++LI C ++I++A + F M++ G D SY+ LI K+ R ++ + F M
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 458 QNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
Q G ++ T N +++ Q G ++A + GIS
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 153/352 (43%), Gaps = 37/352 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P YNA+ID+L K+ ++ A+ F+++ +P+ TY L++G+C +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A RL+ M PNV TY+ L+D F +V E + E M ++ P+ T SL++
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 124 GVFRCL-----DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGD 178
G+ CL + ++ F+L++ + L + NTL+ + + R+M
Sbjct: 304 GL--CLHDRIDEANQMFDLMV---SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 179 RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
RG + + T++ + D+++ G+ P TY +L+ L G +
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
+ K + ++ +Y VI CK ++ A + + + + P++VT+ T++S
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Query: 299 GHC---------------------------KDAEVHKTRELLVMLLECGFKP 323
G C D ++ + EL+ +L CG+ P
Sbjct: 479 GLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAP 530
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 85/175 (48%)
Query: 323 PDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRL 382
P FN ++ + + +++ + +M G+ + T+NI+I C V+ +L +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 383 FQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIK 442
KM PD T +L+ FCR N++ A M+ +G +PD +Y+A+I +L K
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ R ++A F +E+ G P+ T ++ L R+ +A ++ ++ I+
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%)
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
R + DA+D S+MV+ P+ + +N L+ ++ + + L +KM+ I D+Y
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
TFN +I FC ++ A ML LG PD + +L+ + R +A M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ G PD N I+++L + R +A D K + +GI
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI 221
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F GISP YN ++ L + ++ A + F+ M + D TY +I G+C+ G
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
V+EA L + G P++ TYT ++ G C + EV + MK+ + N+ T+
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 27/95 (28%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE--------- 63
Y VI + K+ ++ A+ F +S+ KPD TY ++ G+C G++ E
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Query: 64 ------------------ALRLVKQMEGLGYAPNV 80
+ L+K+M GYAP++
Sbjct: 498 QEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSL 532
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 196 bits (498), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 231/497 (46%), Gaps = 10/497 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI PS+ ++D LVK+ + F + +P +F Y I ++ V +
Sbjct: 139 GIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKG 198
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L +M+ P+V+ Y +LIDG C KR+ + ++ + M R + P+ T +L+ G
Sbjct: 199 LELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDG 258
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ +P K+F++ R M+ + + L+ NTLL L M +A +L++M D G++P
Sbjct: 259 YCKAGNPEKSFKVRER-MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVP 317
Query: 184 ESSTFDYTVTCLVTGLDLNETC----GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
++ TF + L G NE G+ +T + GVK T +L+ AL K G+ +
Sbjct: 318 DAFTF----SILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA 373
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ L LV N YN +ID +C+ + A M + + P+ + +N LI
Sbjct: 374 EEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRR 433
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
C+ E+ + + + G P T+N +I R + F+ D L EM + G PN
Sbjct: 434 FCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPN 493
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
++Y LI LC + + + + M+ +SP + +N LI C KIE A +
Sbjct: 494 VVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSK 553
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
ML G+ + +Y+ LI L +G+ EA+ L + + G PD +T N ++ G
Sbjct: 554 EMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAG 613
Query: 480 RFEEAHDIVKTSKERGI 496
+ + + K GI
Sbjct: 614 NVQRCIALYEEMKRSGI 630
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/524 (25%), Positives = 239/524 (45%), Gaps = 41/524 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS YN +ID K+ + + ++ ++M D +P T+N L+ G+ + G+V++A +
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+K+M+ LG+ P+ +T++IL DG+ + ++ V E + V N T L++ + +
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLL-----------YRLSNNSMASE-------- 168
KA E+L R M + + +++ NT++ R+ +M +
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426
Query: 169 ----------------AAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
A + KM +G P T++ + + ++ IL
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS-NVNSYNMVIDCFCKVNMM 271
G P +Y L+ L K + +E + + +DR VS V YNM+ID C +
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEA-QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545
Query: 272 DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 331
+ A +EM + I NLVT+NTLI G ++ + +LL+ + G KPD FT+NS+
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSL 605
Query: 332 IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 391
I A + + EM G+ P TY++LI SLC + + RLF +M +
Sbjct: 606 ISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMS---L 661
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
PD+ +N ++ + +EKA M+ + D +Y++LI +K G+ E +
Sbjct: 662 KPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRS 721
Query: 452 TFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
M P++ T N+I++ + + A+ + +E+G
Sbjct: 722 LIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKG 765
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 157/338 (46%)
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
L+ + M SEAA + + + G P S + + LV T + ++ +P
Sbjct: 119 LNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 178
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
Y ++A K +G N + DR+ +V YN++ID CK M+ A ++
Sbjct: 179 KFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFD 238
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
EM R + P+L+T+NTLI G+CK K+ ++ + +P TFN+++ L +A
Sbjct: 239 EMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAG 298
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
EDA + L EM + G P+ T++IL + +L +++ + + YT +
Sbjct: 299 MVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCS 358
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
L+ + C+ KIEKAE+ + GL P+ Y+ +I + G A+ +ME+
Sbjct: 359 ILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ 418
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G PD N ++ + G E A V K +G+S
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVS 456
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/488 (22%), Positives = 208/488 (42%), Gaps = 5/488 (1%)
Query: 15 AVIDALVKSNSIDLAYLK--FQQMSVDQ--CKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
V+ +L++S+S A K F S+ K D F+Y +L + ++ EA L
Sbjct: 76 GVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHD-FSYLLLSVLLNESKMISEAADLFFA 134
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
+ G P+ + T+L+D K+ V + E + P++ + + D
Sbjct: 135 LRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD 194
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
K EL R + N L+ L ++A + +M R LP T++
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
+ + ++ + + ++P T+ L++ L+KAG + + L +
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
V + +++++ D + + A + D + N T + L++ CK+ ++ K
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
E+L + G P++ +N+MID CR A + M + G+ P+ + YN LIR
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C +G++ + + KM+ +SP + T+N LI + R + +K M G P+
Sbjct: 435 CELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNV 494
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
SY LI L K + EA+ ME G +P N++++ +G+ E+A K
Sbjct: 495 VSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKE 554
Query: 491 SKERGISF 498
++GI
Sbjct: 555 MLKKGIEL 562
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 157/366 (42%), Gaps = 39/366 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SPS YN +I + D + ++M + P+ +Y LI+ +C+ + EA
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ + ME G +P V Y +LIDG C+ ++ + FR + M ++ + N T +L+ G
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +T KL SEA +L ++ +G P+
Sbjct: 574 L--------------------SMTGKL---------------SEAEDLLLEISRKGLKPD 598
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ ++ ++ + + + G+KP TY LL+ K G ++ +
Sbjct: 599 VFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGE 658
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
K L+ YN V+ C+ M++A + ++M ++ I + T+N+LI G K
Sbjct: 659 MSLKPDLL----VYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVG 714
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
++ + R L+ + +P+ T+N ++ C + A EM E G + N
Sbjct: 715 KLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGN 774
Query: 365 ILIRSL 370
L+ L
Sbjct: 775 ELVSGL 780
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 109/232 (46%)
Query: 270 MMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
M+ A ++ +R+ I P+ + L+ K + T + + +LE F+P KF +
Sbjct: 124 MISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYG 183
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
I + L+ + M + P+ YN+LI LC + + +LF +M A
Sbjct: 184 KAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR 243
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
R+ P + T+N LI +C+ EK+ K M + P +++ L+K L K+G ++A
Sbjct: 244 RLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDA 303
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ M+ G PD++T +++ + + E A + +T+ + G+ ++
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAY 355
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 51/122 (41%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ + P +YN V+ ++ A+ +QM D+ TYN LI G ++G + E
Sbjct: 659 MSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCE 718
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L+ +M P TY I++ G C K + M+E+ + LV
Sbjct: 719 VRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVS 778
Query: 124 GV 125
G+
Sbjct: 779 GL 780
Score = 40.0 bits (92), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 75/210 (35%), Gaps = 31/210 (14%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILI-------- 52
IS G+ P YN++I + ++ +++M KP TY++LI
Sbjct: 590 ISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGI 649
Query: 53 -----------------------HGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDG 89
H G +++A L KQM + TY LI G
Sbjct: 650 ELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILG 709
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
++ EV +++ M R + P T +V G D A+ E+ L
Sbjct: 710 QLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLD 769
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+ N L+ L + EA ++ +M R
Sbjct: 770 VCIGNELVSGLKEEWRSKEAEIVISEMNGR 799
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 196 bits (497), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 232/487 (47%), Gaps = 7/487 (1%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G PS + Y++++ L K ID ++M KP+ +T+ I I + R G ++EA
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++K+M+ G P+V TYT+LID C A+++ V E MK P+ T +L+
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 125 VF--RCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMGDRGY 181
R LD K F ME++ +V T+L L EA L M D+G
Sbjct: 338 FSDNRDLDSVKQF---WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
LP T++ + L+ L++ + GVKP TY++ ++ K+G V
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ + N+ + N + K A +I ++D + P+ VT+N ++ +
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
K E+ + +LL ++E G +PD NS+I+ L +A R ++A M E + P +
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSM 421
TYN L+ L G + ++ LF+ M P+ TFN L C+ +++ A K F M
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 422 LTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRF 481
+ +G PD F+Y+ +I L+K+G+ EA F M++ PD T +L +V+
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLI 693
Query: 482 EEAHDIV 488
E+A+ I+
Sbjct: 694 EDAYKII 700
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/535 (24%), Positives = 248/535 (46%), Gaps = 47/535 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ P+ YN ++ L K+ I A F+ M C P+ T+N L +C+ V AL
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 628
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+++ +M +G P+V+TY +I G +V E MK + V P+ T+ +L+ GV
Sbjct: 629 KMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGV 687
Query: 126 FRCLDPHKAFELLIRFM---EREP-----------------------LTQKLVCNTLL-- 157
+ A++++ F+ +P +++LV N +
Sbjct: 688 VKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRD 747
Query: 158 ----------YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGI 207
Y +N+++ + D G P+ T++ + L+ D+ E
Sbjct: 748 GDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEA-DMIEIAQ- 805
Query: 208 LDTFIK---RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDC 264
D F++ G P +TY L++A K+G+ E + +N ++N+VI
Sbjct: 806 -DVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISG 864
Query: 265 FCKVNMMDRATEICRE-MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
K +D A ++ + M DRD +P T+ LI G K +++ ++L +L+ G +P
Sbjct: 865 LVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP 924
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
+ +N +I+ +A + A MV+ GV P+ TY++L+ LC +G V L F
Sbjct: 925 NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 984
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL-GLRPDNFSYSALIKALIK 442
++++ ++PD+ +N +I + +++E+A F M T G+ PD ++Y++LI L
Sbjct: 985 KELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGI 1044
Query: 443 SGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+G +EA + + +++ G P+ +T N ++ G+ E A+ + +T G S
Sbjct: 1045 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFS 1099
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 228/495 (46%), Gaps = 6/495 (1%)
Query: 4 LGISPSTRLYNAVIDAL-VKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVD 62
L + +T N +++AL V ++AY+ F M K D TY + + G +
Sbjct: 112 LNLVHTTETCNYMLEALRVDGKLEEMAYV-FDLMQKRIIKRDTNTYLTIFKSLSVKGGLK 170
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
+A +++M G+ N Y+Y LI ++ E V M P+ T SL+
Sbjct: 171 QAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLM 230
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGY 181
G+ + D LL + ME L + T+ R L +EA IL++M D G
Sbjct: 231 VGLGKRRDIDSVMGLL-KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC 289
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG-D 240
P+ T+ + L T L+ + + KP TY+ L++ + RD++
Sbjct: 290 GPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR-FSDNRDLDSVK 348
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
++ + + KD V +V ++ +++D CK A + MRD+ I PNL T+NTLI G
Sbjct: 349 QFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGL 408
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
+ + EL + G KP +T+ ID ++ AL+ +M G+ PN
Sbjct: 409 LRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNI 468
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ N + SL G + ++F ++ + PD T+N +++ + ++ +I++A K
Sbjct: 469 VACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSE 528
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
M+ G PD ++LI L K+ R DEA + F+ M++ P T N +L L + G+
Sbjct: 529 MMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK 588
Query: 481 FEEAHDIVKTSKERG 495
+EA ++ + ++G
Sbjct: 589 IQEAIELFEGMVQKG 603
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/487 (22%), Positives = 205/487 (42%), Gaps = 39/487 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P+ Y ID KS A F++M P+ N ++ + + G E
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 486
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ ++ +G P+ TY +++ + + E ++L M E P+ V SL++
Sbjct: 487 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN 546
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+++ +A+++ +R E + + NTLL L N EA + M +G P
Sbjct: 547 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 606
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ TF+ CL ++ +L + G P TY ++ L K G+
Sbjct: 607 NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ-------- 658
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
V + C + M + + P+ VT TL+ G K
Sbjct: 659 -----------------VKEAMCFFHQMKKL-----------VYPDFVTLCTLLPGVVKA 690
Query: 304 AEVHKTRELLV-MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ + +++ L C +P + +I + ++A+ +V G+ + +
Sbjct: 691 SLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDS 750
Query: 363 YNI-LIRSLCAIGDVARSLRLFQKMQAD-RISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ +IR C +V+ + LF+K D + P + T+N LI + IE A+ F
Sbjct: 751 ILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQ 810
Query: 421 MLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGR 480
+ + G PD +Y+ L+ A KSG+ DE + + M + C ++ T N+++ LV+ G
Sbjct: 811 VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870
Query: 481 FEEAHDI 487
++A D+
Sbjct: 871 VDDALDL 877
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 155/365 (42%), Gaps = 37/365 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ P YN +I L++++ I++A F Q+ C PD TYN L+ + G +DE
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV-LEIMKERNVCPNEATVRSLV 122
L K+M N T+ I+I G A V + + ++M +R+ P T L+
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G LS + EA + M D G
Sbjct: 899 DG-----------------------------------LSKSGRLYEAKQLFEGMLDYGCR 923
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P + ++ + + + C + +K GV+P TY +L++ L GR EG Y
Sbjct: 924 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR-DRDIAPNLVTFNTLISGHC 301
+ + L +V YN++I+ K + ++ A + EM+ R I P+L T+N+LI
Sbjct: 984 FKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG 1043
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
V + ++ + G +P+ FTFN++I + + E A MV G PNT
Sbjct: 1044 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTG 1103
Query: 362 TYNIL 366
TY L
Sbjct: 1104 TYEQL 1108
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 159/343 (46%), Gaps = 2/343 (0%)
Query: 155 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 214
T+ LS +A LRKM + G++ + +++ + L+ E + I
Sbjct: 158 TIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILE 217
Query: 215 GVKPRFSTYLLLMEALYKAGRDVEGDR-YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G +P TY LM L K RD++ L + L NV ++ + I + ++
Sbjct: 218 GFRPSLQTYSSLMVGLGKR-RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE 276
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A EI + M D P++VT+ LI C ++ +E+ + KPD+ T+ +++D
Sbjct: 277 AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD 336
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
+ SEM + G P+ +T+ IL+ +LC G+ + M+ I P
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396
Query: 394 DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTF 453
+++T+N LI R+++++ A + F +M +LG++P ++Y I KSG A +TF
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456
Query: 454 LSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M+ G P+ N L +L + GR EA I K+ G+
Sbjct: 457 EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGL 499
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 149/320 (46%)
Query: 177 GDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
G+ + + T +Y + L L E + D KR +K +TYL + ++L G
Sbjct: 110 GNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGL 169
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
+ L + + V N SYN +I K A E+ R M P+L T+++L
Sbjct: 170 KQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSL 229
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ G K ++ LL + G KP+ +TF I L RA + +A + L M + G
Sbjct: 230 MVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC 289
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEK 416
P+ +TY +LI +LC + + +F+KM+ R PD T+ L+ F ++ ++
Sbjct: 290 GPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQ 349
Query: 417 AFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLV 476
+ M G PD +++ L+ AL K+G F EA T M G P+ +T N ++ L+
Sbjct: 350 FWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL 409
Query: 477 QQGRFEEAHDIVKTSKERGI 496
+ R ++A ++ + G+
Sbjct: 410 RVHRLDDALELFGNMESLGV 429
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 182/434 (41%), Gaps = 41/434 (9%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ--CKPDRFTYNILIHGICRIGVVDEAL 65
P+ + +I +++ ID A + F + V C+ +I C+ V A
Sbjct: 711 PANLFWEDLIGSILAEAGIDNA-VSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGAR 769
Query: 66 RLVKQM-EGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++ + LG P + TY +LI G A + V +K P+ AT L+
Sbjct: 770 TLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDA 829
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + FEL +E T + NT+
Sbjct: 830 YGKSGKIDELFELY-----KEMSTHECEANTI---------------------------- 856
Query: 185 SSTFDYTVTCLVTGLDLNETCGIL-DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T + ++ LV ++++ + D R P TY L++ L K+GR E +
Sbjct: 857 --THNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 914
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ N YN++I+ F K D A + + M + P+L T++ L+ C
Sbjct: 915 EGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 974
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM-VEWGVPPNTIT 362
V + L E G PD +N +I+ L ++HR E+AL +EM G+ P+ T
Sbjct: 975 GRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYT 1034
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
YN LI +L G V + +++ ++Q + P+++TFNALI+ + K E A + +M+
Sbjct: 1035 YNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1094
Query: 423 TLGLRPDNFSYSAL 436
T G P+ +Y L
Sbjct: 1095 TGGFSPNTGTYEQL 1108
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 234/504 (46%), Gaps = 19/504 (3%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLV---- 68
+N +I + + + F +++ +PD T+N L+HG+C + EAL L
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 69 -----------KQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEAT 117
QM +G P V T+ LI+G C RV E ++ M + + + T
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 118 VRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMG 177
++V+G+ + D A LL + E ++ + ++ RL + S+A + +M
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDV 237
++G P T++ + + ++ +L I+R + P T+ L+ A K G+
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
E ++ + + + + +YN +I FCK N D A + M D +P++VTFNT+I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTII 439
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
+C+ V + +LL + G + T+N++I C A D EM+ GV
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P+TIT NIL+ C + +L LF+ +Q +I D +N +I C+ +K+++A
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
F S+ G+ PD +Y+ +I +A F M+ NG PD+ T N ++ ++
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 619
Query: 478 QGRFEEAHDIVKTSKERGISFKSF 501
G +++ +++ + G S +F
Sbjct: 620 AGEIDKSIELISEMRSNGFSGDAF 643
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 226/498 (45%), Gaps = 24/498 (4%)
Query: 4 LGISPSTRLYNAVIDALVKSNSI-----------DLAYLK----FQQMSVDQCKPDRFTY 48
LG P +N ++ L + I + +L+ F QM P T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 49 NILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKE 108
N LI+G+C G V EA LV +M G G +V TY +++G C +L M+E
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 109 RNVCPNEATVRSLVHGVFRCLDPHK--AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
++ P+ +++ + C D H A L +E+ N ++ +
Sbjct: 290 THIKPDVVIYSAIIDRL--CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
S+A +LR M +R P+ TF+ ++ V L E + D + R + P TY +
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ K R + H+F +V ++N +ID +C+ +D ++ RE+ R +
Sbjct: 408 IYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
N T+NTLI G C+ ++ ++L ++ G PD T N ++ C + E+AL+
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
+ + +T+ YNI+I +C V + LF + + PD+ T+N +I FC
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ I A F M G PDN +Y+ LI+ +K+G D++ + M NG + D++
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Query: 467 TSNLILETLVQQGRFEEA 484
T ++ + L+ GR +++
Sbjct: 644 TIKMVAD-LITDGRLDKS 660
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/513 (25%), Positives = 225/513 (43%), Gaps = 51/513 (9%)
Query: 14 NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEG 73
N VI V+ N D+A +++M + + + +++NILI C + +L ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 74 LGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHK 133
LG+ P+V T+ L+ G C R++E + M E A +V L P
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVE---IGLTP-- 224
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
++I F NTL+ L EAAA++ KM +G + T+ V
Sbjct: 225 ---VVITF------------NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
+ D +L + +KP Y +++ L K G + + + + +
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV +YN +ID FC A + R+M +R+I P+++TFN LIS K+ ++ + +L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 314 -VMLLECGF------------------------------KPDKFTFNSMIDCLCRAHRFE 342
ML C F PD TFN++ID CRA R +
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+ + L E+ G+ NT TYN LI C + ++ + LFQ+M + + PD T N L+
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 403 QSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCN 462
FC K+E+A + F + + D +Y+ +I + K + DEA F S+ +G
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 463 PDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
PD T N+++ + +A+ + K+ G
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 173/386 (44%), Gaps = 21/386 (5%)
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
F+ LD A + + P + CN ++ + A ++ RKM R
Sbjct: 84 FKSLD--DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNI 141
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM----------EALYKAGR 235
+F+ + C L+ + K G +P T+ L+ EAL G
Sbjct: 142 YSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201
Query: 236 DVEGD-----RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
VE + + + L V ++N +I+ C + A + +M + + ++
Sbjct: 202 MVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
VT+ T+++G CK + LL + E KPD ++++ID LC+ DA SE
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
M+E G+ PN TYN +I C+ G + + RL + M I+PD+ TFNALI + + K
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNL 470
+ +AEK ML + PD +Y+++I K RFD+AK F M +PD T N
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNT 437
Query: 471 ILETLVQQGRFEEAHDIVKTSKERGI 496
I++ + R +E +++ RG+
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGL 463
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 124/271 (45%), Gaps = 15/271 (5%)
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
+ +++ + R N VI F ++N D A + R+M R I N+ +FN LI C
Sbjct: 93 FFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFC 152
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLS------------ 349
++ + L + GF+PD TFN+++ LC R +AL
Sbjct: 153 DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVA 212
Query: 350 ---EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
+MVE G+ P IT+N LI LC G V + L KM + D+ T+ ++ C
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+M + A M ++PD YSA+I L K G +A+ F M + G P+ +
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T N +++ GR+ +A +++ ER I+
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 35/173 (20%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNIL--------- 51
IS G+ +T YN +I + ++++ A FQ+M PD T NIL
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 52 --------------------------IHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTI 85
IHG+C+ VDEA L + G P+V TY +
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 86 LIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELL 138
+I GFC +++ + MK+ P+ +T +L+ G + + K+ EL+
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 195 bits (495), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 226/494 (45%), Gaps = 9/494 (1%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
I+ + + P R +A++ LVK LA F M +PD + Y +I +C +
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A ++ ME G N+ Y +LIDG C ++V E + + + +++ P+ T +
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
LV+G+ + + E++ + + ++L+ L EA +++++ D G
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P ++ + L G +E + D K G++P TY +L++ + G+
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+L + L +V YN +I+ CK + A EM ++ + P +VT+ +L+ G+
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C +++K L + G P +TF +++ L RA DA+ +EM EW V PN
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+TYN++I C GD++++ ++M I PD Y++ LI C + +A K F
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVD 601
Query: 421 MLTLG-LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ- 478
L G + Y+ L+ + G+ +EA M Q G + D ++++ ++
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHK 661
Query: 479 ------GRFEEAHD 486
G +E HD
Sbjct: 662 DRKLFFGLLKEMHD 675
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/523 (25%), Positives = 219/523 (41%), Gaps = 43/523 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G+SP+ +YNA+ID+L K A L F +M +P+ TY+ILI CR G +D
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDT 420
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
AL + +M G +VY Y LI+G C ++ + M + + P T SL+
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G +KA L + TLL L + +A + +M + P
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP 540
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + D+++ L ++G+ P +Y L+ L G+ E ++
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ + K N Y ++ FC+ ++ A +C+EM R + +LV + LI G K
Sbjct: 601 DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK- 659
Query: 304 AEVHKTRELLVMLL----ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
HK R+L LL + G KPD + SMID + F++A M+ G PN
Sbjct: 660 ---HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISP-------------------------- 393
+TY +I LC G V + L KMQ P
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELH 776
Query: 394 ---------DIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+ T+N LI+ FCR +IE+A + M+ G+ PD +Y+ +I L +
Sbjct: 777 NAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN 836
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDI 487
+A + + SM + G PD N ++ G +A ++
Sbjct: 837 DVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 209/479 (43%), Gaps = 16/479 (3%)
Query: 1 ISFLGISPSTRL------YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHG 54
+SFLG T L YN++I+ K I A +M + +P TY L+ G
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 55 ICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPN 114
C G +++ALRL +M G G AP++YT+T L+ G A + + ++ M E NV PN
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 115 EATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILR 174
T ++ G D KAFE L E+ + L++ L ASEA +
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV- 600
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEAL 230
D + + T L+ G L E + ++RGV Y +L++
Sbjct: 601 ---DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 231 YKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNL 290
K L + L + Y +ID K A I M + PN
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 291 VTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH-RFEDALDCLS 349
VT+ +I+G CK V++ L + P++ T+ +D L + + A++ L
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE-LH 776
Query: 350 EMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMN 409
+ G+ NT TYN+LIR C G + + L +M D +SPD T+ +I CR N
Sbjct: 777 NAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN 836
Query: 410 KIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
++KA + + SM G+RPD +Y+ LI +G +A + M + G P++ TS
Sbjct: 837 DVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTS 895
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 134/602 (22%), Positives = 234/602 (38%), Gaps = 111/602 (18%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+GI P +Y VI +L + + A M C + YN+LI G+C+ V E
Sbjct: 221 VGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWE 280
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKER---NVCPNEATVRS 120
A+ + K + G P+V TY L+ G C +V E LE+M E P+EA V S
Sbjct: 281 AVGIKKDLAGKDLKPDVVTYCTLVYGLC---KVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
LV G+ + +A L+ R ++ V N L+ L EA + +MG G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 181 YLPESSTFD-------------------------------YTVTCLVTGL----DLNETC 205
P T+ Y L+ G D++
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
G + I + ++P TY LM G+ + R + + + ++ ++ ++
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
+ ++ A ++ EM + ++ PN VT+N +I G+C++ ++ K E L + E G PD
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Query: 326 FTFNSMIDCLC-----------------------------------RAHRFEDALDCLSE 350
+++ +I LC R + E+AL E
Sbjct: 578 YSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQE 637
Query: 351 MVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
MV+ GV + + Y +LI D L ++M + PD + ++I + +
Sbjct: 638 MVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD 697
Query: 411 IEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSME---------QNGC 461
++A + M+ G P+ +Y+A+I L K+G +EA+ M+ GC
Sbjct: 698 FKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGC 757
Query: 462 NPD--------------------------SYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
D + T N+++ +QGR EEA +++ G
Sbjct: 758 FLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDG 817
Query: 496 IS 497
+S
Sbjct: 818 VS 819
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 188/415 (45%), Gaps = 1/415 (0%)
Query: 83 YTILIDGFCNAKRVAEVFRVLEIMKER-NVCPNEATVRSLVHGVFRCLDPHKAFELLIRF 141
+ +LI + ++RV + V ++M + ++ P T+ +L+HG+ + A EL
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 142 MEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
+ + ++ L S A ++ M G ++ + L +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 202 NETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMV 261
E GI + +KP TY L+ L K G ++ + R + + + +
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 262 IDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGF 321
++ K ++ A + + + D ++PNL +N LI CK + H+ L + + G
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 322 KPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLR 381
+P+ T++ +ID CR + + AL L EMV+ G+ + YN LI C GD++ +
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 382 LFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALI 441
+M ++ P + T+ +L+ +C KI KA + + M G+ P ++++ L+ L
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 442 KSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++G +A + F M + P+ T N+++E ++G +A + +K E+GI
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 159/368 (43%), Gaps = 1/368 (0%)
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR-GYLPESSTFD 189
P F +L E+ L+ + L+ + + + + M + LPE T
Sbjct: 137 PSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLS 196
Query: 190 YTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKD 249
+ LV + + + G++P Y ++ +L + + H+
Sbjct: 197 ALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEAT 256
Query: 250 RLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKT 309
N+ YN++ID CK + A I +++ +D+ P++VT+ TL+ G CK E
Sbjct: 257 GCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIG 316
Query: 310 RELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRS 369
E++ +L F P + +S+++ L + + E+AL+ + +V++GV PN YN LI S
Sbjct: 317 LEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376
Query: 370 LCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPD 429
LC + LF +M + P+ T++ LI FCR K++ A M+ GL+
Sbjct: 377 LCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLS 436
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+ Y++LI K G A+ M P T ++ +G+ +A +
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 490 TSKERGIS 497
+GI+
Sbjct: 497 EMTGKGIA 504
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 122/257 (47%)
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ K L+ V + + ++ K A E+ +M I P++ + +I C+ +
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
+ + +E++ + G + +N +ID LC+ + +A+ ++ + P+ +TY
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
L+ LC + + L + +M R SP ++L++ + KIE+A ++ G
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ P+ F Y+ALI +L K +F EA+ F M + G P+ T +++++ ++G+ + A
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 486 DIVKTSKERGISFKSFP 502
+ + G+ +P
Sbjct: 423 SFLGEMVDTGLKLSVYP 439
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 130/330 (39%), Gaps = 37/330 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P T Y +I L + A + + C+ + Y L+HG CR G ++EA
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L + ++M G ++ Y +LIDG K F +L+ M +R + P++ S++
Sbjct: 632 LSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDA 691
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ D +AF + + + ++ ++ L +EA + KM +P
Sbjct: 692 KSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPN 751
Query: 185 SSTFDYTVTCLVTG-LDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T+ + L G +D+ + + + +K G+ +TY +L+ + GR E +
Sbjct: 752 QVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELI 810
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVN---------------------------------- 269
+ D + + +Y +I+ C+ N
Sbjct: 811 TRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVA 870
Query: 270 -MMDRATEICREMRDRDIAPNLVTFNTLIS 298
M +ATE+ EM + + PN T T S
Sbjct: 871 GEMGKATELRNEMLRQGLIPNNKTSRTTTS 900
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 195 bits (495), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 229/527 (43%), Gaps = 35/527 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP L+ I+A K ++ A F +M P+ T+N +I G+ G DEA
Sbjct: 268 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 327
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++M G P + TY+IL+ G AKR+ + + VL+ M ++ PN +L+
Sbjct: 328 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 387
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+KA E+ + + NTL+ N A A +L++M G+
Sbjct: 388 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 447
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+F + L + L + + + R + P L+ L K G+ +
Sbjct: 448 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 507
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
V + + N ++ C+ +D A I +E+ R + V++NTLISG C
Sbjct: 508 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 567
Query: 305 EV--------------------------------HKTRELLVMLLEC---GFKPDKFTFN 329
++ +K E + +C G PD +T++
Sbjct: 568 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 627
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
MID C+A R E+ + EM+ V PNT+ YN LIR+ C G ++ +L L + M+
Sbjct: 628 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 687
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
ISP+ T+ +LI+ ++++E+A+ F M GL P+ F Y+ALI K G+ +
Sbjct: 688 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 747
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ M +P+ T +++ + G EA ++ +E+GI
Sbjct: 748 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 794
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 208/458 (45%), Gaps = 7/458 (1%)
Query: 43 PDRFTYNILIHGICRIGVVD---EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEV 99
P + T NIL+ + R EA +V + G +P+VY +T I+ FC +V E
Sbjct: 237 PSKTTCNILLTSLVRANEFQKCCEAFDVVCK----GVSPDVYLFTTAINAFCKGGKVEEA 292
Query: 100 FRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR 159
++ M+E V PN T +++ G+ C +AF + +ER + + L+
Sbjct: 293 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 352
Query: 160 LSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPR 219
L+ +A +L++M +G+ P ++ + + LN+ I D + +G+
Sbjct: 353 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 412
Query: 220 FSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICR 279
STY L++ K G+ +R L + N S+ VI C M D A
Sbjct: 413 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 472
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
EM R+++P TLISG CK + K EL L GF D T N+++ LC A
Sbjct: 473 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 532
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+ ++A E++ G + ++YN LI C + + +M + PD YT++
Sbjct: 533 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 592
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI MNK+E+A + + G+ PD ++YS +I K+ R +E ++ F M
Sbjct: 593 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 652
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
P++ N ++ + GR A ++ + K +GIS
Sbjct: 653 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 690
Score = 182 bits (461), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 207/445 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P+ +YN +ID+ +++ S++ A M TYN LI G C+ G D A
Sbjct: 373 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 432
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
RL+K+M +G+ N ++T +I C+ R + M RN+ P + +L+ G
Sbjct: 433 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 492
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + KA EL +F+ + + N LL+ L EA I +++ RG + +
Sbjct: 493 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 552
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+++ ++ L+E LD +KRG+KP TY +L+ L+ + E ++ +
Sbjct: 553 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 612
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
++ ++ +V +Y+++ID CK + E EM +++ PN V +N LI +C+
Sbjct: 613 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 672
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ EL + G P+ T+ S+I + R E+A EM G+ PN Y
Sbjct: 673 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 732
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
LI +G + + L ++M + + P+ T+ +I + R + +A + M
Sbjct: 733 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 792
Query: 425 GLRPDNFSYSALIKALIKSGRFDEA 449
G+ PD+ +Y I +K G EA
Sbjct: 793 GIVPDSITYKEFIYGYLKQGGVLEA 817
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 1/181 (0%)
Query: 320 GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARS 379
G P K T N ++ L RA+ F+ + ++V GV P+ + I + C G V +
Sbjct: 234 GMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEA 292
Query: 380 LRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKA 439
++LF KM+ ++P++ TFN +I + ++A M+ G+ P +YS L+K
Sbjct: 293 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 352
Query: 440 LIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFK 499
L ++ R +A M + G P+ N ++++ ++ G +A +I +G+S
Sbjct: 353 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 412
Query: 500 S 500
S
Sbjct: 413 S 413
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
ALD + G+ P+ T NIL+ SL + + F + +SPD+Y F I
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAIN 281
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+FC+ K+E+A K F M G+ P+ +++ +I L GR+DEA M + G P
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 341
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
T +++++ L + R +A+ ++K ++G
Sbjct: 342 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKG 373
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y A+ID K + ++M P++ TY ++I G R G V EA
Sbjct: 723 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 782
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFR 101
RL+ +M G P+ TY I G+ V E F+
Sbjct: 783 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 229/495 (46%), Gaps = 2/495 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G + S NA+I +LV+ ++LA+ +Q++S + +T NI+++ +C+ G +++
Sbjct: 195 GFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKV 254
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ Q++ G P++ TY LI + + + E F ++ M + P T ++++G
Sbjct: 255 GTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVING 314
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A E+ + +LL E + M R +P+
Sbjct: 315 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD 374
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
F ++ +L++ ++ + G+ P Y +L++ + G N
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRN 434
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +V +YN ++ CK M+ A ++ EM +R + P+ T LI GHCK
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ EL + E + D T+N+++D + + A + ++MV + P I+Y+
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 554
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
IL+ +LC+ G +A + R++ +M + I P + N++I+ +CR E M++
Sbjct: 555 ILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSM--EQNGCNPDSYTSNLILETLVQQGRFE 482
G PD SY+ LI ++ +A M EQ G PD +T N IL +Q + +
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 483 EAHDIVKTSKERGIS 497
EA +++ ERG++
Sbjct: 675 EAEVVLRKMIERGVN 689
Score = 172 bits (435), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 121/501 (24%), Positives = 218/501 (43%), Gaps = 37/501 (7%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
IS G+ + N +++AL K ++ Q+ PD TYN LI G+
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNA---KRVAEVF----------------- 100
++EA L+ M G G++P VYTY +I+G C +R EVF
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 101 ---------------RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE 145
+V M+ R+V P+ S++ R + KA E
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 146 PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETC 205
+ ++ L+ M S A + +M +G + T++ + L L E
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 206 GILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCF 265
+ + +R + P T +L++ K G + + R+ +V +YN ++D F
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
KV +D A EI +M ++I P ++++ L++ C + + + ++ KP
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTV 585
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
NSMI CR+ D L +M+ G P+ I+YN LI +++++ L +K
Sbjct: 586 MICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK 645
Query: 386 MQADR--ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
M+ ++ + PD++T+N+++ FCR N++++AE M+ G+ PD +Y+ +I +
Sbjct: 646 MEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQ 705
Query: 444 GRFDEAKQTFLSMEQNGCNPD 464
EA + M Q G +PD
Sbjct: 706 DNLTEAFRIHDEMLQRGFSPD 726
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 186/433 (42%), Gaps = 12/433 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G SP YN VI+ L K + A F +M PD TY L+ C+ G V E
Sbjct: 300 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET 359
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ M P++ ++ ++ F + + + +KE + P+ L+ G
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R A L +++ + NT+L+ L M EA + +M +R P+
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 479
Query: 185 SSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR-DVEG 239
S YT+T L+ G +L + ++ ++ TY L++ K G D
Sbjct: 480 S----YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + + V K+ L + + SY+++++ C + A + EM ++I P ++ N++I G
Sbjct: 536 EIWADMVSKEILPTPI-SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE--WGVP 357
+C+ L ++ GF PD ++N++I R A + +M E G+
Sbjct: 595 YCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV 654
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P+ TYN ++ C + + + +KM ++PD T+ +I F + + +A +
Sbjct: 655 PDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
Query: 418 FFSMLTLGLRPDN 430
ML G PD+
Sbjct: 715 HDEMLQRGFSPDD 727
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%)
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
N F+ LI + + ++ + E +L GF N++I L R E A
Sbjct: 162 GSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWG 221
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
E+ GV N T NI++ +LC G + + ++Q + PDI T+N LI ++
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+E+A + +M G P ++Y+ +I L K G+++ AK+ F M ++G +PDS
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGI 496
T +L ++G E + + R +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDV 371
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%)
Query: 328 FNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
F+ +I +A + +A + + + G + N LI SL IG V + ++Q++
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ ++YT N ++ + C+ K+EK + G+ PD +Y+ LI A G +
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 448 EAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
EA + +M G +P YT N ++ L + G++E A ++ G+S
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS 337
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 23/202 (11%)
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE-WGVP----------------PNTITY 363
FK + ++MI L R+ R DA CL M+ GV N +
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF 168
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
++LIR+ + + F +++ + I NALI S R+ +E A + +
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISR 228
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLS-MEQNGCNPDSYTSNLILETLVQQGRFE 482
G+ + ++ + ++ AL K G+ ++ TFLS +++ G PD T N ++ +G E
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVG-TFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 483 EAHDIVKTSKERGISFKSFPGL 504
EA +++ +G S PG+
Sbjct: 288 EAFELMNAMPGKGFS----PGV 305
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/498 (26%), Positives = 233/498 (46%), Gaps = 4/498 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKF-QQMSVDQCKPDRFTYNILIHGICRIG 59
+ G +PS NA++ ++VKS D++ F ++M + PD T+NILI+ +C G
Sbjct: 149 MGLYGFNPSVYTCNAILGSVVKSGE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEG 207
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+++ L+++ME GYAP + TY ++ +C R +L+ MK + V + T
Sbjct: 208 SFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYN 267
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
L+H + R K + LL +R ++ NTL+ SN A+ +L +M
Sbjct: 268 MLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSF 327
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYK-AGRDVE 238
G P TF+ + ++ + E + +G+ P +Y +L++ L K A D+
Sbjct: 328 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 387
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
Y+ V + +Y +ID CK +D A + EM I P++VT++ LI+
Sbjct: 388 RGFYMRMKRNGVCVGRI-TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 446
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G CK +E++ + G P+ ++++I CR ++A+ M+ G
Sbjct: 447 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 506
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ T+N+L+ SLC G VA + + M +D I P+ +F+ LI + + KA F
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M +G P F+Y +L+K L K G EA++ S+ D+ N +L + +
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 626
Query: 479 GRFEEAHDIVKTSKERGI 496
G +A + +R I
Sbjct: 627 GNLAKAVSLFGEMVQRSI 644
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 138/536 (25%), Positives = 227/536 (42%), Gaps = 44/536 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G++PS Y ++D L K+ DLA + +M + R TY +I G+C+ G +DEA
Sbjct: 363 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 422
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ L+ +M G P++ TY+ LI+GFC R ++ + + PN +L++
Sbjct: 423 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 482
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
R +A + + N L+ L +EA +R M G LP
Sbjct: 483 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN 542
Query: 185 SSTFDYTVTCLVTGLDLN----ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ +FD CL+ G + + + D K G P F TY L++ L K G E +
Sbjct: 543 TVSFD----CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
++L + + YN ++ CK + +A + EM R I P+ T+ +LISG
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658
Query: 301 C------------KDAEVHKTRELLVMLLEC------------------------GFKPD 324
C K+AE ++ C G PD
Sbjct: 659 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 718
Query: 325 KFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ 384
T N+MID R + E D L EM PN TYNIL+ DV+ S L++
Sbjct: 719 IVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYR 778
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSG 444
+ + I PD T ++L+ C N +E K + + G+ D ++++ LI +G
Sbjct: 779 SIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANG 838
Query: 445 RFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKS 500
+ A M G + D T + ++ L + RF+E+ ++ ++GIS +S
Sbjct: 839 EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 894
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 205/456 (44%), Gaps = 35/456 (7%)
Query: 41 CKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 100
C + Y+ILI R G++ ++L + + M G+ P+VYT ++ + V+
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 101 RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
L+ M +R +CP+ AT F +LI + E +K
Sbjct: 179 SFLKEMLKRKICPDVAT-----------------FNILINVLCAEGSFEK---------- 211
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
++ +++KM GY P T++ + +LD +GV
Sbjct: 212 --------SSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADV 263
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY +L+ L ++ R +G L + K + N +YN +I+ F + A+++ E
Sbjct: 264 CTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNE 323
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M ++PN VTFN LI GH + + ++ M+ G P + ++ ++D LC+
Sbjct: 324 MLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE 383
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
F+ A M GV ITY +I LC G + ++ L +M D I PDI T++A
Sbjct: 384 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 443
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI FC++ + + A++ + +GL P+ YS LI + G EA + + +M G
Sbjct: 444 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 503
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
D +T N+++ +L + G+ EA + ++ GI
Sbjct: 504 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 228/486 (46%), Gaps = 9/486 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+SP+ +Y+ +I + + A ++ M ++ D FT+N+L+ +C+ G V E
Sbjct: 467 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 526
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ M G PN ++ LI+G+ N+ + F V + M + P T SL+
Sbjct: 527 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 586
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ + +A + L ++ NTLL + + ++A ++ +M R LP
Sbjct: 587 GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 646
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIK----RG-VKPRFSTYLLLMEALYKAGRDVE 238
+S YT T L++GL I F K RG V P Y ++ ++KAG+
Sbjct: 647 DS----YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 702
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
G + + ++ + N +ID + ++ +++ ++ EM +++ PNL T+N L+
Sbjct: 703 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 762
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
G+ K +V + L ++ G PDK T +S++ +C ++ E L L + GV
Sbjct: 763 GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 822
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ T+N+LI CA G++ + L + M + IS D T +A++ R ++ +++
Sbjct: 823 DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 882
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
M G+ P++ Y LI L + G A M + P + + ++ L +
Sbjct: 883 HEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 942
Query: 479 GRFEEA 484
G+ +EA
Sbjct: 943 GKADEA 948
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 215/484 (44%), Gaps = 2/484 (0%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+PS +Y+ +I ++ I + F+ M + P +T N ++ + + G
Sbjct: 122 NPS--VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
+K+M P+V T+ ILI+ C + +++ M++ P T +++H
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A ELL + N L++ L ++ ++ +LR M R P
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
T++ + + +L+ + G+ P T+ L++ G E + +
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
L + SY +++D CK D A M+ + +T+ +I G CK+ +
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ LL + + G PD T++++I+ C+ RF+ A + + + G+ PN I Y+ L
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I + C +G + ++R+++ M + + D +TFN L+ S C+ K+ +AE+ M + G+
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
P+ S+ LI SG +A F M + G +P +T +L+ L + G EA
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 599
Query: 487 IVKT 490
+K+
Sbjct: 600 FLKS 603
Score = 149 bits (375), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 229/498 (45%), Gaps = 13/498 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P+T ++ +I+ S A+ F +M+ P FTY L+ G+C+ G + EA
Sbjct: 538 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 597
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +K + + A + Y L+ C + +A+ + M +R++ P+ T SL+ G
Sbjct: 598 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 657
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSM--ASEAAAIL---RKMGDR 179
+ R + I F + ++ N ++Y + M A + A + +M +
Sbjct: 658 LCR----KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 713
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G+ P+ T + + + +T +L + P +TY +L+ Y +DV
Sbjct: 714 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG-YSKRKDVST 772
Query: 240 D--RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
Y + + L + +++V+ C+ NM++ +I + R + + TFN LI
Sbjct: 773 SFLLYRSIILNGILPDKLTCHSLVLG-ICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 831
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
S C + E++ +L+ ++ G DK T ++M+ L R HRF+++ L EM + G+
Sbjct: 832 SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 891
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKA 417
P + Y LI LC +GD+ + + ++M A +I P +A++++ + K ++A
Sbjct: 892 PESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLL 951
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQ 477
ML + L P S++ L+ K+G EA + + M G D + N+++ L
Sbjct: 952 LRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCA 1011
Query: 478 QGRFEEAHDIVKTSKERG 495
+G A ++ + K G
Sbjct: 1012 KGDMALAFELYEEMKGDG 1029
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 180/432 (41%), Gaps = 36/432 (8%)
Query: 10 TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVK 69
T +YN ++ A+ KS ++ A F +M PD +TY LI G+CR G A+ K
Sbjct: 613 TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK 672
Query: 70 ------------------------------------QMEGLGYAPNVYTYTILIDGFCNA 93
QM+ LG+ P++ T +IDG+
Sbjct: 673 EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 732
Query: 94 KRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC 153
++ + +L M +N PN T L+HG + D +F L + L KL C
Sbjct: 733 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 792
Query: 154 NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIK 213
++L+ + ++M IL+ RG + TF+ ++ ++N ++
Sbjct: 793 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 852
Query: 214 RGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDR 273
G+ T ++ L + R E L+ + K + Y +I+ C+V +
Sbjct: 853 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 912
Query: 274 ATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMID 333
A + EM I P V + ++ K + + LL +L+ P +F +++
Sbjct: 913 AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMH 972
Query: 334 CLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISP 393
C+ +AL+ M G+ + ++YN+LI LCA GD+A + L+++M+ D
Sbjct: 973 LCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1032
Query: 394 DIYTFNALIQSF 405
+ T+ ALI+
Sbjct: 1033 NATTYKALIRGL 1044
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
I P +A++ AL K D A L + M + P ++ L+H C+ G V EAL
Sbjct: 925 ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L M G ++ +Y +LI G C +A F + E MK N T ++L+ G+
Sbjct: 985 ELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Query: 126 F 126
Sbjct: 1045 L 1045
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 6/205 (2%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
++ LGIS +A++ L +++ + + +MS P+ Y LI+G+CR+G
Sbjct: 850 MTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD 909
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ A + ++M P + ++ + E +L M + + P A+ +
Sbjct: 910 IKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTT 969
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDR 179
L+H + + +A EL + M L LV N L+ L + A + +M
Sbjct: 970 LMHLCCKNGNVIEALELRV-VMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGD 1028
Query: 180 GYLPESSTFDYTVTCLVTGLDLNET 204
G+L ++T+ L+ GL ET
Sbjct: 1029 GFLANATTYK----ALIRGLLARET 1049
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 219/460 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ ++++ ID VKS + A + +++M P+ TY ILI G+C+ G + EA
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ Q+ G P++ TY+ LIDGFC + F + E M + P+ LV G
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + A ++ + + +V N+L+ + EA + R MG G P+
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+TF + + L E + K G++P Y L++A K + G + +
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ ++++ +++ N+VI K + ++ A++ + + + P++VT+NT+I G+C
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 650
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + +L F P+ T +I LC+ + + A+ S M E G PN +TY
Sbjct: 651 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 710
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ D+ S +LF++MQ ISP I +++ +I C+ ++++A F +
Sbjct: 711 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 770
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
L PD +Y+ LI+ K GR EA + M +NG PD
Sbjct: 771 KLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 208/457 (45%), Gaps = 14/457 (3%)
Query: 14 NAVIDALVKSNSID---LAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
+ V D ++ + D L ++ + + D CK L+ CR G+VD+AL +
Sbjct: 119 DKVFDEMITNRGKDFNVLGSIRDRSLDADVCK-------FLMECCCRYGMVDKALEIFVY 171
Query: 71 MEGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCL 129
LG P Y +L + + RV + + + + P+ + V C
Sbjct: 172 STQLGVVIPQDSVYRML-NSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK 230
Query: 130 -DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTF 188
+ KA + MER + CN +L LS + + A+ +L + D G P TF
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQI-EVASRLLSLVLDCGPAPNVVTF 289
Query: 189 DYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
+ +++ + +RG++P Y L++ +KAG G + +
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
+ +V ++ ID + K + A+ + + M + I+PN+VT+ LI G C+D +++
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+ +L+ G +P T++S+ID C+ +M++ G PP+ + Y +L+
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
L G + ++R KM I ++ FN+LI +CR+N+ ++A K F M G++P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDS 465
D +++ +++ I GR +EA F M + G PD+
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDA 566
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/493 (24%), Positives = 226/493 (45%), Gaps = 4/493 (0%)
Query: 5 GISPS-TRLYNAVIDALVKSNSIDLAYLKFQQMSVDQC-KPDRFTYNILIHGICRIGVVD 62
GI PS + V+DAL + A L F ++ +++ + + N ++ G+ + ++
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKA-LDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIE 268
Query: 63 EALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV 122
A RL+ + G APNV T+ LI+GFC + F + ++M++R + P+ +L+
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 123 HGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G F+ +L + + + +V ++ + + + A+ + ++M +G
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T+ + L + E G+ +KRG++P TY L++ K G G
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ K +V Y +++D K +M A +M + I N+V FN+LI G C+
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ ++ ++ G KPD TF +++ R E+AL M + G+ P+ +
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALA 568
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
Y LI + C L+LF MQ ++IS DI N +I + ++IE A K F +++
Sbjct: 569 YCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 628
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ PD +Y+ +I R DEA++ F ++ P++ T +++ L + +
Sbjct: 629 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 688
Query: 483 EAHDIVKTSKERG 495
A + E+G
Sbjct: 689 GAIRMFSIMAEKG 701
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/481 (22%), Positives = 211/481 (43%), Gaps = 37/481 (7%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P+ T+ LI+G C+ G +D A L K ME G P++ Y+ LIDG+ A + ++
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LS 161
+ V + S + + D A ++ + M + ++ +V T+L + L
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATA-SVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 162 NNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFS 221
+ EA + ++ RG P T+ + +L + + IK G P
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 222 TYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
Y +L++ L K G + R+ + + NV +N +ID +C++N D A ++ R M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCR---- 337
I P++ TF T++ + + + L + + G +PD + ++ID C+
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP 582
Query: 338 -------------------------------AHRFEDALDCLSEMVEWGVPPNTITYNIL 366
HR EDA + ++E + P+ +TYN +
Sbjct: 583 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 642
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
I C++ + + R+F+ ++ P+ T LI C+ N ++ A + F M G
Sbjct: 643 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 702
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHD 486
+P+ +Y L+ KS + + + F M++ G +P + ++I++ L ++GR +EA +
Sbjct: 703 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 762
Query: 487 I 487
I
Sbjct: 763 I 763
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 8/227 (3%)
Query: 272 DRATEICREMRDRDIAPNLVTFNTLI--SGHCKDAEVHKTRELLVMLLECGFKPDKFTFN 329
D ++CR I P+ V+ + + + CK EV K + +++E GF+ + N
Sbjct: 202 DHFDKLCRG----GIEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCN 256
Query: 330 SMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
++ L + E A LS +++ G PN +T+ LI C G++ R+ LF+ M+
Sbjct: 257 KVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
I PD+ ++ LI + + + K F L G++ D +S+ I +KSG A
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
+ M G +P+ T ++++ L Q GR EA + +RG+
Sbjct: 376 SVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 118/286 (41%), Gaps = 35/286 (12%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G+ P Y +IDA K + F M ++ D N++IH + + +++
Sbjct: 560 MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 619
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + + P++ TY +I G+C+ +R+ E R+ E++K PN T+ L+H
Sbjct: 620 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 679
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
++C NN M A + M ++G P
Sbjct: 680 ---------------------------VLCK-------NNDMDG-AIRMFSIMAEKGSKP 704
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ T+ + +D+ + + + ++G+ P +Y ++++ L K GR E
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPN 289
+ +L+ +V +Y ++I +CKV + A + M + P+
Sbjct: 765 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 102/253 (40%), Gaps = 37/253 (14%)
Query: 280 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
+RDR + ++ F L+ C+ V K E+ V + G + + M++ L +
Sbjct: 138 SIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSD 195
Query: 340 RFEDALDCLSEMVEWGVPPNTIT-YNILIRSLCAIGDVARSL------------------ 380
R + D ++ G+ P+ ++ + ++ +L G+V ++L
Sbjct: 196 RVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSC 255
Query: 381 -RLFQKMQADRI---------------SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
++ + + D+I +P++ TF LI FC+ ++++A F M
Sbjct: 256 NKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+ PD +YS LI K+G + F G D + ++ V+ G A
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375
Query: 485 HDIVKTSKERGIS 497
+ K +GIS
Sbjct: 376 SVVYKRMLCQGIS 388
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/458 (27%), Positives = 219/458 (47%), Gaps = 14/458 (3%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSI-DLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
+S ++P YN ++ A+ K + DL L M + P+R TYN L++G C++G
Sbjct: 231 VSEFKVNPDNVTYNTILKAMSKKGRLSDLKEL-LLDMKKNGLVPNRVTYNNLVYGYCKLG 289
Query: 60 VVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVR 119
+ EA ++V+ M+ P++ TY ILI+G CNA + E +++ MK + P+ T
Sbjct: 290 SLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYN 349
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAA--AILRKMG 177
+L+ G F L R + + + N + + +S + E A+ RK+
Sbjct: 350 TLIDGCFEL-----GLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVK 404
Query: 178 D----RGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKA 233
+ G+ P+ T+ + + DL+ ++ ++G+K T +++AL K
Sbjct: 405 ELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464
Query: 234 GRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTF 293
+ E LN K + + +Y +I F + +++A E+ EM+ I P + TF
Sbjct: 465 RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTF 524
Query: 294 NTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVE 353
N+LI G C + E L E G PD TFNS+I C+ R E A + +E ++
Sbjct: 525 NSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIK 584
Query: 354 WGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEK 413
P+ T NIL+ LC G ++L F + +R D T+N +I +FC+ K+++
Sbjct: 585 HSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKE 643
Query: 414 AEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQ 451
A M GL PD F+Y++ I L++ G+ E +
Sbjct: 644 AYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDE 681
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 237/492 (48%), Gaps = 5/492 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV--- 60
L PS L++ + A + +A FQ+M + KP+ T N L+ G+ R
Sbjct: 125 LSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFS 184
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM-KERNVCPNEATVR 119
+ A + M +G + NV T+ +L++G+C ++ + +LE M E V P+ T
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 120 SLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+++ + + ELL+ + + ++ N L+Y EA I+ M
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
LP+ T++ + L + E ++D ++P TY L++ ++ G +E
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRD-RDIAPNLVTFNTLIS 298
+ + + D + +N ++N+ + CK + T +E+ D +P++VT++TLI
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPP 358
+ K ++ E++ + + G K + T N+++D LC+ + ++A + L+ + G
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAF 418
+ +TY LI V ++L ++ +M+ +I+P + TFN+LI C K E A + F
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544
Query: 419 FSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+ GL PD+ +++++I K GR ++A + + ++ PD+YT N++L L ++
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604
Query: 479 GRFEEAHDIVKT 490
G E+A + T
Sbjct: 605 GMTEKALNFFNT 616
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 167/418 (39%), Gaps = 74/418 (17%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ YN ++ K S+ A+ + M PD TYNILI+G+C G + E
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREG 329
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDG----------------------------------- 89
L L+ M+ L P+V TY LIDG
Sbjct: 330 LELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKW 389
Query: 90 FCNA-KRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
C KR A +V E++ P+ T +L+ + D A E++ ++
Sbjct: 390 LCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM 449
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
+ NT+L L EA +L RG++ + T+ + + + +
Sbjct: 450 NTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMW 509
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
D K + P ST+ L+ L G+ + + + L+ + +++N +I +CK
Sbjct: 510 DEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKE 569
Query: 269 NMMDRATE-----------------------ICRE-------------MRDRDIAPNLVT 292
+++A E +C+E + +R++ + VT
Sbjct: 570 GRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV--DTVT 627
Query: 293 FNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSE 350
+NT+IS CKD ++ + +LL + E G +PD+FT+NS I L + + + L +
Sbjct: 628 YNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 154/327 (47%), Gaps = 11/327 (3%)
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST--YLLLMEALYKAGRDVEGD 240
P + FD ++ + + I I+ +KP T LL+ Y + +
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 241 RYLNHVFKDRL---VS-NVNSYNMVIDCFCKVNMMDRATEICREM-RDRDIAPNLVTFNT 295
R VF D + VS NV ++N++++ +C ++ A + M + + P+ VT+NT
Sbjct: 189 R---EVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNT 245
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
++ K + +ELL+ + + G P++ T+N+++ C+ ++A + M +
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAE 415
V P+ TYNILI LC G + L L M++ ++ PD+ T+N LI + +A
Sbjct: 306 VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEAR 365
Query: 416 KAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM-EQNGCNPDSYTSNLILET 474
K M G++ + +++ +K L K + + + + + +G +PD T + +++
Sbjct: 366 KLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKA 425
Query: 475 LVQQGRFEEAHDIVKTSKERGISFKSF 501
++ G A ++++ ++GI +
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTI 452
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 192 bits (489), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 211/410 (51%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ LGIS + YN +I+ + + + LA +M +PD T N L++G C
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ +A+ LV QM +GY P+ T+T LI G + +E +++ M +R P+ T +
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
+V+G+ + D A LL + + ++ +T++ L +A + +M ++G
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P T+ ++CL ++ +L I+R + P T+ L++A K G+ V+ +
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + K + N+ +Y+ +I+ FC ++ + A ++ M +D PN+VT+NTLI+G
Sbjct: 344 KLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
CK V K EL + + G + T+ ++I +A ++A +MV GV PN
Sbjct: 404 CKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 463
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNK 410
+TYNIL+ LC G +A+++ +F+ +Q + PDIYT+N +I+ C+ K
Sbjct: 464 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 223/475 (46%), Gaps = 35/475 (7%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ ++ A+ K N DL ++M + + +TYNILI+ CR + AL L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LGY P++ T L++GFC+ R+++ +++ M E P+ T
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTF--------- 186
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
TL++ L ++ ASEA A++ +M RG P+ T
Sbjct: 187 --------------------------TTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVT 220
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ V L D + +L+ ++ Y ++++L K + + +
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ NV +Y+ +I C C A+ + +M +R I PNLVTF+ LI K ++
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
K +L +++ P+ FT++S+I+ C R +A L M+ PN +TYN LI
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
C V + + LF++M + + T+ LI F + + A+ F M+++G+
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
P+ +Y+ L+ L K+G+ +A F ++++ PD YT N+++E + + G+++
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 218/476 (45%), Gaps = 43/476 (9%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
Y V+ + +D A F M+ + P ++ L+ I ++ D + ++ME
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
LG + N+YTY ILI+ FC R++ +L M + P+ T+ SL++G
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNG-------- 157
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+ + S+A A++ +M + GY P++ TF
Sbjct: 158 ---------------------------FCHGNRISDAVALVDQMVEMGYKPDTVTF---- 186
Query: 193 TCLVTGLDLN----ETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFK 248
T L+ GL L+ E ++D ++RG +P TY ++ L K G LN +
Sbjct: 187 TTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEA 246
Query: 249 DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
++ +NV Y+ VID CK D A + EM ++ + PN++T+++LIS C
Sbjct: 247 AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSD 306
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
LL ++E P+ TF+++ID + + A EM++ + PN TY+ LI
Sbjct: 307 ASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLIN 366
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
C + + + ++ + M P++ T+N LI FC+ +++K + F M GL
Sbjct: 367 GFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVG 426
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
+ +Y+ LI ++ D A+ F M G +P+ T N++L+ L + G+ +A
Sbjct: 427 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 482
Score = 112 bits (279), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 130/284 (45%), Gaps = 35/284 (12%)
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ R ++ ++ ++ K+N D +M I+ NL T+N LI+ C+ + +
Sbjct: 71 QSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLS 130
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
LL +++ G++PD T NS+++ C +R DA+ + +MVE G P+T+T+ LI
Sbjct: 131 LALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLI 190
Query: 368 R-----------------------------------SLCAIGDVARSLRLFQKMQADRIS 392
LC GD +L L KM+A +I
Sbjct: 191 HGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIE 250
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
++ ++ +I S C+ + A F M G+RP+ +YS+LI L GR+ +A +
Sbjct: 251 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRL 310
Query: 453 FLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M + NP+ T + +++ V++G+ +A + + +R I
Sbjct: 311 LSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 107/239 (44%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P+ Y+++I L A M + P+ T++ LI + G + +A
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA 342
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+L ++M PN++TY+ LI+GFC R+ E ++LE+M ++ PN T +L++G
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLING 402
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ K EL +R + + TL++ A + ++M G P
Sbjct: 403 FCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 462
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
T++ + L L + + + + ++P TY +++E + KAG+ G Y
Sbjct: 463 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%)
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
+DA+ M + P+ I ++ L+ ++ + + +KM+ IS ++YT+N
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
LI FCR +++ A M+ LG PD + ++L+ R +A M + G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
PD+ T ++ L + EA ++ +RG
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG 213
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 220/471 (46%), Gaps = 45/471 (9%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS + V+ + K N D+ + +M D +++ ILIH CR + AL L
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
+ +M LG+ P++ T L++GFC R E +++ M PN ++++G+ +
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
D + A E+ ++ + NTL+ LSN+ ++AA +LR M R P
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
F ++DTF+K G LL LYK +
Sbjct: 257 FT----------------ALIDTFVKEG-------NLLEARNLYK------------EMI 281
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVH 307
+ +V NV +YN +I+ FC + A + M + P++VT+NTLI+G CK V
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 341
Query: 308 KTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILI 367
+L + G D FT+N++I C+A + A + MV+ GV P+ +TYNIL+
Sbjct: 342 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 401
Query: 368 RSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLR 427
LC G + ++L + + +Q + DI T+N +IQ CR +K+++A F S+ G++
Sbjct: 402 DCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVK 461
Query: 428 PDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP----------DSYTS 468
PD +Y +I L + G EA + M+++G P D YTS
Sbjct: 462 PDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTS 512
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 158/359 (44%)
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
C+ AF L ++ P+ + +L ++ + + KM + G +
Sbjct: 55 LHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDL 114
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
+F + C L+ +L +K G +P T L+ + R E ++
Sbjct: 115 YSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDS 174
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ V NV YN VI+ CK ++ A E+ M + I + VT+NTLISG
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
LL +++ P+ F ++ID + +A + EM+ V PN TYN
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
LI C G + + +F M + PD+ T+N LI FC+ ++E K F M G
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
L D F+Y+ LI ++G+ + A++ F M G +PD T N++L+ L G+ E+A
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 196/470 (41%), Gaps = 70/470 (14%)
Query: 27 DLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTIL 86
D A+ F +M + P + ++ I ++ D + L +ME LG + ++Y++TIL
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 87 IDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREP 146
I FC R++ +L M + P+ T+ SL++G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNG---------------------- 158
Query: 147 LTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCG 206
+ EA +++ M G++P ++ + L DLN
Sbjct: 159 -------------FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 207 ILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFC 266
+ K+G++ TY L+ L +GR + R L
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL----------------------- 242
Query: 267 KVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKF 326
R+M R I PN++ F LI K+ + + R L ++ P+ F
Sbjct: 243 ------------RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 290
Query: 327 TFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKM 386
T+NS+I+ C DA MV G P+ +TYN LI C V ++LF +M
Sbjct: 291 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350
Query: 387 QADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRF 446
+ D +T+N LI +C+ K+ A+K F M+ G+ PD +Y+ L+ L +G+
Sbjct: 351 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 410
Query: 447 DEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
++A ++++ + D T N+I++ L + + +EA + ++ +G+
Sbjct: 411 EKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 121/237 (51%)
Query: 261 VIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECG 320
+++ FC+ N A + M PN+V +NT+I+G CK+ +++ E+ + + G
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 321 FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSL 380
+ D T+N++I L + R+ DA L +MV+ + PN I + LI + G++ +
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 381 RLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
L+++M + P+++T+N+LI FC + A+ F M++ G PD +Y+ LI
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
KS R ++ + F M G D++T N ++ Q G+ A + + G+S
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 391
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 151/332 (45%), Gaps = 6/332 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P+ +YN VI+ L K+ ++ A F M + D TYN LI G+ G +
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A RL++ M PNV +T LID F + E + + M R+V PN T SL++
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 124 G--VFRCL-DPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
G + CL D F+L++ + + NTL+ + + + +M +G
Sbjct: 298 GFCIHGCLGDAKYMFDLMV---SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
+ ++ T++ + LN + + + GV P TY +L++ L G+ +
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ + K + ++ +YN++I C+ + + A + R + + + P+ + + T+ISG
Sbjct: 415 VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
C+ + +L + E GF P + ++ +
Sbjct: 475 CRKGLQREADKLCRRMKEDGFMPSERIYDETL 506
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+F+DA EM++ P+ + + ++ + + + L+ KM+ IS D+Y+F
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI FCR +++ A M+ LG RP + +L+ + RF EA SM+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G P+ N ++ L + A ++ +++GI
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGI 215
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 192 bits (488), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 125/519 (24%), Positives = 234/519 (45%), Gaps = 60/519 (11%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI+P T +N +I AL S+ +D A F +M CKP+ FT+ IL+ G C+ G+ D+
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L L+ ME G PN Y ++ FC R + +++E M+E + P+ T S +
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Query: 125 V---FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+ + LD + F ME + N++ Y L +L+ G
Sbjct: 262 LCKEGKVLDASRIFS----DMELDEYLGLPRPNSITYNL-----------MLKGFCKVGL 306
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
L ++ T + ++ + +Y + ++ L + G+ +E +
Sbjct: 307 LEDAKT-------------------LFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + + ++ SYN+++D CK+ M+ A I M+ + P+ VT+ L+ G+C
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTI 361
+V + LL ++ P+ +T N ++ L + R +A + L +M E G +T+
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467
Query: 362 TYNILIRSLCAIGDVARSLRLFQKMQADRIS-----------------------PDIYTF 398
T NI++ LC G++ +++ + + M+ + PD+ T+
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
+ L+ C+ + +A+ F M+ L+PD+ +Y+ I K G+ A + ME+
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
GC+ T N ++ L + + E H ++ KE+GIS
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGIS 626
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/510 (25%), Positives = 227/510 (44%), Gaps = 31/510 (6%)
Query: 3 FLGIS-PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVV 61
+LG+ P++ YN ++ K ++ A F+ + + +YNI + G+ R G
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKF 342
Query: 62 DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSL 121
EA ++KQM G P++Y+Y IL+DG C +++ ++ +MK VCP+ T L
Sbjct: 343 IEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCL 402
Query: 122 VHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
+HG A LL M L CN LL+ L SEA +LRKM ++GY
Sbjct: 403 LHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY 462
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGIL-----------------------DTFIKRGVKP 218
++ T + V L +L++ I+ D+ I+ P
Sbjct: 463 GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLP 522
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEIC 278
TY L+ L KAGR E + ++L + +YN+ I FCK + A +
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVL 582
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
++M + +L T+N+LI G ++ + L+ + E G P+ T+N+ I LC
Sbjct: 583 KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEG 642
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQ-KMQADRISPDIYT 397
+ EDA + L EM++ + PN ++ LI + C + D + +F+ + +Y+
Sbjct: 643 EKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYS 702
Query: 398 --FNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLS 455
FN L+ + ++ KA + ++L G F Y L+++L K + A
Sbjct: 703 LMFNELLAA----GQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHK 758
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
M G D +++ L + G +EA+
Sbjct: 759 MIDRGYGFDPAALMPVIDGLGKMGNKKEAN 788
Score = 165 bits (418), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/502 (24%), Positives = 214/502 (42%), Gaps = 64/502 (12%)
Query: 15 AVIDALVKSNSIDLAYLKFQ--QMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+V+ KSN ID A+ +FQ + + KP + YN+L+ + V+ L K M
Sbjct: 80 SVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMV 139
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G AP YT+ +LI C++ V + + M E+ PNE T LV G +
Sbjct: 140 LCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTD 199
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
K ELL L K++ NT++ ++ ++ KM + G +P+ TF+ +
Sbjct: 200 KGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRI 259
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
+ AL K G+ ++ R + + D +
Sbjct: 260 S-----------------------------------ALCKEGKVLDASRIFSDMELDEYL 284
Query: 253 S----NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHK 308
N +YN+++ FCKV +++ A + +R+ D +L ++N + G + + +
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIE 344
Query: 309 TRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIR 368
+L + + G P +++N ++D LC+ DA + M GV P+ +TY L+
Sbjct: 345 AETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLH 404
Query: 369 SLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRP 428
C++G V + L Q+M + P+ YT N L+ S +M +I +AE+ M G
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGL 464
Query: 429 DNFSYSALIKALIKSGRFDEAKQTFLSME-----------------------QNGCNPDS 465
D + + ++ L SG D+A + M +N C PD
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDL 524
Query: 466 YTSNLILETLVQQGRFEEAHDI 487
T + +L L + GRF EA ++
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKNL 546
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 115/288 (39%), Gaps = 46/288 (15%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P Y+ +++ L K+ A F +M ++ +PD YNI IH C+ G + A R+
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 68 VKQME----------------------------GL-------GYAPNVYTYTILIDGFCN 92
+K ME GL G +PN+ TY I C
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD---PHKAFELLIRFMEREPLTQ 149
++V + +L+ M ++N+ PN + + L+ + D + FE + ++
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLY 701
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT--VTCLVTGLDLNETCGI 207
L+ N LL +A +L + DRG+ E TF Y V L +L GI
Sbjct: 702 SLMFNELLAA----GQLLKATELLEAVLDRGF--ELGTFLYKDLVESLCKKDELEVASGI 755
Query: 208 LDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNV 255
L I RG + + +++ L K G E + + + + + V V
Sbjct: 756 LHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEV 803
Score = 32.7 bits (73), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN----FSYSALIKALIKSGRFDEAKQTFLS 455
+++ F + N I+KA F L P+N + Y+ L+++ IK R + +
Sbjct: 80 SVVSIFAKSNHIDKAFPQF--QLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKD 137
Query: 456 MEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
M G P +YT NL++ L + A ++ E+G F
Sbjct: 138 MVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEF 183
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 192 bits (488), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 224/492 (45%), Gaps = 33/492 (6%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S S + +IDA K+ +D A ++M + D Y LI G C G +D
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRG 266
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++ G +P TY LI GFC ++ E + E M ER V PN T L+ G
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG 326
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ +A +LL +E++ + N ++ +L + + ++A I+ M R P+
Sbjct: 327 LCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD 386
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
+ T++ + L DL+E +L YL+L ++ Y
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLL--------------YLMLKDSSYTD----------- 421
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+V SYN +I CK N + +A +I + ++ A + VT N L++ K
Sbjct: 422 --------PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+V+K EL + + + T+ +MID C+ A L +M + P+ YN
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ SLC G + ++ RLF++MQ D PD+ +FN +I + I+ AE M
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
GL PD F+YS LI +K G DEA F M +G PD++ + +L+ + QG ++
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKL 653
Query: 485 HDIVKTSKERGI 496
++VK ++ I
Sbjct: 654 TELVKKLVDKDI 665
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 229/487 (47%), Gaps = 37/487 (7%)
Query: 13 YNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQME 72
+N ++ L ++ A ++M + PD F+YN +I G C +++AL L +M+
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 73 GLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPH 132
G G + ++ T+ ILID FC A ++ E L+ MK + + SL+ G C +
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 133 KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTV 192
+ L +ER + NTL+ R G L E+S
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLI----------------RGFCKLGQLKEASE----- 303
Query: 193 TCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLV 252
I + I+RGV+P TY L++ L G+ E + LN + +
Sbjct: 304 --------------IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE 349
Query: 253 SNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTREL 312
N +YN++I+ CK ++ A EI M+ R P+ +T+N L+ G C ++ + +L
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Query: 313 LVMLLECG--FKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
L ++L+ PD ++N++I LC+ +R ALD +VE + +T NIL+ S
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNST 469
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
GDV +++ L++++ +I + T+ A+I FC+ + A+ M L+P
Sbjct: 470 LKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSV 529
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
F Y+ L+ +L K G D+A + F M+++ PD + N++++ ++ G + A ++
Sbjct: 530 FDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVG 589
Query: 491 SKERGIS 497
G+S
Sbjct: 590 MSRAGLS 596
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 187/406 (46%), Gaps = 4/406 (0%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ F+G+ +Y ++I +D F ++ P TYN LI G C++G
Sbjct: 238 MKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQ 297
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
+ EA + + M G PNVYTYT LIDG C + E ++L +M E++ PN T
Sbjct: 298 LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNI 357
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM-GDR 179
+++ + + A E++ +R + N LL L EA+ +L M D
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Query: 180 GYL-PESSTFDYTVTCLVTGLDLNETCGILDTFIKR-GVKPRFSTYLLLMEALYKAGRDV 237
Y P+ +++ + L L++ I D +++ G R +T +LL L KAG
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTL-KAGDVN 476
Query: 238 EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLI 297
+ + ++V N ++Y +ID FCK M++ A + +MR ++ P++ +N L+
Sbjct: 477 KAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLL 536
Query: 298 SGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP 357
S CK+ + + L + PD +FN MID +A + A L M G+
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLS 596
Query: 358 PNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
P+ TY+ LI +G + ++ F KM PD + +++++
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 130/241 (53%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV ++N+++ C+ +A + REMR + P++ ++NT+I G C+ E+ K EL
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
+ G T+ +ID C+A + ++A+ L EM G+ + + Y LIR C
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G++ R LF ++ SP T+N LI+ FC++ ++++A + F M+ G+RP+ ++Y
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKE 493
+ LI L G+ EA Q M + P++ T N+I+ L + G +A +IV+ K+
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 494 R 494
R
Sbjct: 381 R 381
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 107/218 (49%)
Query: 279 REMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
R+M + D N V+ + L+ + + + +L ++L+ GF + + N ++ LCR
Sbjct: 96 RKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRN 155
Query: 339 HRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTF 398
A+ L EM + P+ +YN +IR C ++ ++L L +M+ S + T+
Sbjct: 156 LECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTW 215
Query: 399 NALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQ 458
LI +FC+ K+++A M +GL D Y++LI+ G D K F + +
Sbjct: 216 GILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLE 275
Query: 459 NGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G +P + T N ++ + G+ +EA +I + ERG+
Sbjct: 276 RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 152/337 (45%), Gaps = 10/337 (2%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ YN +I+ L K + A + M + +PD TYNIL+ G+C G +DEA +L
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Query: 68 VKQM-EGLGYA-PNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
+ M + Y P+V +Y LI G C R+ + + +++ E+ + T L++
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNST 469
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ D +KA EL + + + + ++ M + A +L KM R +
Sbjct: 470 LKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM--RVSELQP 527
Query: 186 STFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
S FDY CL++ L L++ + + + P ++ ++++ KAG +
Sbjct: 528 SVFDY--NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAES 585
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
L + + L ++ +Y+ +I+ F K+ +D A +M D P+ ++++
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCI 645
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRA 338
E K EL+ L++ DK +++D +C +
Sbjct: 646 SQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNS 682
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
+ PS YN ++ +L K S+D A+ F++M D PD ++NI+I G + G + A
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
L+ M G +P+++TY+ LI+ F + E + M + P+ S++
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644
Query: 126 FRCLDPHKAFELLIRFMERE-PLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDR 179
+ K EL+ + ++++ L ++L C + Y ++++ A +LR D+
Sbjct: 645 ISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTDDK 699
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/120 (19%), Positives = 52/120 (43%)
Query: 379 SLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIK 438
+ ++KM + + + L++ + +M K A ML G + ++++ L+K
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 439 ALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISF 498
L ++ +A M +N PD ++ N ++ + E+A ++ K G S+
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 230/527 (43%), Gaps = 45/527 (8%)
Query: 6 ISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEAL 65
ISP T Y V+ + S +D AY ++M C+P+ Y LI + +A+
Sbjct: 415 ISPYT--YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472
Query: 66 RLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGV 125
R++K+M+ G AP+++ Y LI G AKR+ E L M E + PN T + + G
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Query: 126 FRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPES 185
+ A + + E L K++C L+ EA + R M D+G L ++
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592
Query: 186 STFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNH 245
T+ + L +++ I +G+ P +Y +L+ K G + +
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ ++ L NV YNM++ FC+ +++A E+ EM + + PN VT+ T+I G+CK +
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDAL--------DCLSE------M 351
+ + L + G PD F + +++D CR + E A+ C S +
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNAL 772
Query: 352 VEWGVP------------------------PNTITYNILIRSLCAIGDVARSLRLFQKMQ 387
+ W PN +TYNI+I LC G++ + LF +MQ
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832
Query: 388 ADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFD 447
+ P + T+ +L+ + +M + + F + G+ PD+ YS +I A +K G
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892
Query: 448 EA----KQTFL-SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+A Q F + +GC T +L + G E A +++
Sbjct: 893 KALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVME 939
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/524 (24%), Positives = 232/524 (44%), Gaps = 42/524 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+S Y+ +ID L+K + D A +M + Y+ I + + GV+++
Sbjct: 306 LGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEK 365
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L M G P Y LI+G+C K V + + +L MK+RN+ + T ++V
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ D A+ ++ + ++ TL+ NS +A +L++M ++G P
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ ++ + L ++E L ++ G+KP TY + +A D+Y+
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545
Query: 244 NH-----------------------------------VFKDRLVSNVNSYNMVIDCFCKV 268
+ ++ + +Y ++++ K
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
+ +D A EI REMR + IAP++ ++ LI+G K + K + ++E G P+ +
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N ++ CR+ E A + L EM G+ PN +TY +I C GD+A + RLF +M+
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
+ PD + + L+ CR+N +E+A F G ++ALI + K G+ E
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERA-ITIFGTNKKGCASSTAPFNALINWVFKFGK-TE 783
Query: 449 AKQTFLSMEQNGC-----NPDSYTSNLILETLVQQGRFEEAHDI 487
K L+ +G P+ T N++++ L ++G E A ++
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKEL 827
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 222/507 (43%), Gaps = 27/507 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P + Y ++I+ + ++ Y +M +TY ++ G+C G +D A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+VK+M G PNV YT LI F R + RVL+ MKE+ + P+ SL+ G
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + +A L+ +E + S + A +++M + G LP
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 185 SSTFDYTVTCLVTGL--------DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRD 236
L TGL + E C + + +G+ TY +LM L+K +
Sbjct: 557 K--------VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 237 VEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTL 296
+ + + + +V SY ++I+ F K+ M +A+ I EM + + PN++ +N L
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 297 ISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGV 356
+ G C+ E+ K +ELL + G P+ T+ ++ID C++ +A EM G+
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 357 PPNTITYNILIRSLCAIGDVARSLRLF---QKMQADRISPDIYTFNALIQSFCRMNKIEK 413
P++ Y L+ C + DV R++ +F +K A +P FNALI + K E
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP----FNALINWVFKFGKTEL 784
Query: 414 AEKAFFSMLTLGL----RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
+ ++ +P++ +Y+ +I L K G + AK+ F M+ P T
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Query: 470 LILETLVQQGRFEEAHDIVKTSKERGI 496
+L + GR E + + GI
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGI 871
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/522 (25%), Positives = 231/522 (44%), Gaps = 31/522 (5%)
Query: 2 SFLGISPSTRLY--NAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIG 59
S +G+ RL ++DAL++ N +DL + ++ M D TY++LI CR G
Sbjct: 176 SSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAG 235
Query: 60 VV---------------------DEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAE 98
V D AL+L + M G P YTY +LIDG C KR+ +
Sbjct: 236 NVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLED 295
Query: 99 VFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY 158
+L M V + T L+ G+ + + A L+ + + + + +
Sbjct: 296 AKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCIC 355
Query: 159 RLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKP 218
+S + +A A+ M G +P++ + + ++ + +L KR +
Sbjct: 356 VMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415
Query: 219 RFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS----NVNSYNMVIDCFCKVNMMDRA 274
TY +++ + +G D++G ++ K+ + S NV Y +I F + + A
Sbjct: 416 SPYTYGTVVKGMCSSG-DLDGAY---NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 275 TEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDC 334
+ +EM+++ IAP++ +N+LI G K + + R LV ++E G KP+ FT+ + I
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Query: 335 LCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPD 394
A F A + EM E GV PN + LI C G V + ++ M I D
Sbjct: 532 YIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGD 591
Query: 395 IYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFL 454
T+ L+ + +K++ AE+ F M G+ PD FSY LI K G +A F
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 455 SMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
M + G P+ N++L + G E+A +++ +G+
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/511 (22%), Positives = 209/511 (40%), Gaps = 58/511 (11%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVL 103
D + IL G G ++EA+ + GL P + +L+D R+ + V
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209
Query: 104 EIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMERE------------PLTQKL 151
+ M ERNV + T L+ R + ++L + E+E L + +
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFK-TEKEFRTATLNVDGALKLKESM 268
Query: 152 VC----------NTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDL 201
+C + L+ L +A ++L +M G ++ T+ + L+ G +
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328
Query: 202 NETCGIL-----------------------------------DTFIKRGVKPRFSTYLLL 226
+ G++ D I G+ P+ Y L
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+E + +G L + K +V + +Y V+ C +D A I +EM
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
PN+V + TLI +++ +L + E G PD F +NS+I L +A R ++A
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
L EMVE G+ PN TY I + A + + ++M+ + P+ LI +C
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ K+ +A A+ SM+ G+ D +Y+ L+ L K+ + D+A++ F M G PD +
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ +++ + G ++A I E G++
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659
Score = 105 bits (263), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 173/414 (41%), Gaps = 45/414 (10%)
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLL-YRLSNNSMASEAAAILRKMGDRGYLPES 185
R DP K ++ QKL + L L N +A +++ +M +R + P +
Sbjct: 73 RVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNW-PVA 131
Query: 186 STFDYTVTC---LVTGLDLNETCGIL-DTFIKRG----------------VKPRFSTYLL 225
+ V C V D GIL D +I +G + PR S +
Sbjct: 132 EVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKV 191
Query: 226 LMEALYKAGR-DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMM------------- 271
L++AL + R D+ D Y V ++ +V +V +Y+M+I C+ +
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERN-VVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE 250
Query: 272 --------DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKP 323
D A ++ M + + P T++ LI G CK + + LLV + G
Sbjct: 251 FRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSL 310
Query: 324 DKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLF 383
D T++ +ID L + + A + EMV G+ Y+ I + G + ++ LF
Sbjct: 311 DNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF 370
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
M A + P + +LI+ +CR + + + M + ++Y ++K + S
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
G D A M +GC P+ +++T +Q RF +A ++K KE+GI+
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 331 MIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADR 390
++D L R +R + D MVE V + TY++LI + C G+V + K + +
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF 251
Query: 391 ISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAK 450
+ T N ++ A K SM+ GL P ++Y LI L K R ++AK
Sbjct: 252 RTA---TLN-----------VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAK 297
Query: 451 QTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ M+ G + D++T +L+++ L++ + A +V GI+ K +
Sbjct: 298 SLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPY 348
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 116/314 (36%), Gaps = 53/314 (16%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+S G+ P+ Y +ID KS + A+ F +M + PD F Y L+ G CR+
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
V+ A+ + + N ++ + A +
Sbjct: 748 VERAITI--------FGTN----------------------------KKGCASSTAPFNA 771
Query: 121 LVHGVFRCLDPHKAFELLIRFM----EREPLTQKLVCNTLLYRLSNNSMASEAAAILRKM 176
L++ VF+ E+L R M +R + N ++ L A + +M
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Query: 177 GDRGYLPESSTFDYTVTCLVTGLD----LNETCGILDTFIKRGVKPRFSTYLLLMEALYK 232
+ +P T+ T L+ G D E + D I G++P Y +++ A K
Sbjct: 832 QNANLMPTVITY----TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Query: 233 AGRDVEGDRYLNHVFKDRLVSN-----VNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
G + ++ +F V + +++ ++ F KV M+ A ++ M
Sbjct: 888 EGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYI 947
Query: 288 PNLVTFNTLISGHC 301
P+ T LI+ C
Sbjct: 948 PDSATVIELINESC 961
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 188 bits (477), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 213/467 (45%), Gaps = 36/467 (7%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P + +N ++ +V S+S + + F + + D +++ ILI G C G ++++
Sbjct: 124 GFVPGSNCFNYLLTFVVGSSSFN-QWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKS 182
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L+ ++ G++PNV YT LIDG C + + + M + + NE T L++G
Sbjct: 183 FDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING 242
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+F+ + FE+ + E N ++ +L + +A + +M +RG
Sbjct: 243 LFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCN 302
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T++ + L + LNE ++D G+ P
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP-------------------------- 336
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
N+ +YN +ID FC V + +A +CR+++ R ++P+LVT+N L+SG C+
Sbjct: 337 ---------NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ +++ + E G KP K T+ +ID R+ E A+ M E G+ P+ TY+
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYS 447
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
+LI C G + + RLF+ M P+ +N +I +C+ +A K M
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLI 471
L P+ SY +I+ L K + EA++ M +G +P + +LI
Sbjct: 508 ELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 162 bits (409), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 213/487 (43%), Gaps = 71/487 (14%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQ 70
RLY +I++ V+S S++L+ F +M + P +N L+ + ++ +
Sbjct: 95 RLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE 154
Query: 71 MEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLD 130
+ +VY++ ILI G C A +
Sbjct: 155 NKS-KVVLDVYSFGILIKGCCEAGEI---------------------------------- 179
Query: 131 PHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDY 190
K+F+LLI E ++ TL+ +A + +MG
Sbjct: 180 -EKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGK------------ 226
Query: 191 TVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR 250
GL NE TY +L+ L+K G +G + +D
Sbjct: 227 ------LGLVANE-----------------RTYTVLINGLFKNGVKKQGFEMYEKMQEDG 263
Query: 251 LVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+ N+ +YN V++ CK A ++ EMR+R ++ N+VT+NTLI G C++ ++++
Sbjct: 264 VFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEAN 323
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+++ + G P+ T+N++ID C + AL ++ G+ P+ +TYNIL+
Sbjct: 324 KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C GD + + ++ ++M+ I P T+ LI +F R + +EKA + SM LGL PD
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDV 443
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+YS LI G+ +EA + F SM + C P+ N ++ ++G A ++K
Sbjct: 444 HTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKE 503
Query: 491 SKERGIS 497
+E+ ++
Sbjct: 504 MEEKELA 510
Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 176/367 (47%), Gaps = 37/367 (10%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LG+ + R Y +I+ L K+ + +++M D P+ +TYN +++ +C+ G +
Sbjct: 227 LGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKD 286
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A ++ +M G + N+ TY LI G C ++ E +V++ MK + PN T +L+
Sbjct: 287 AFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLID 346
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G KA L R ++ L+ LV N L+ S AA ++++M +RG
Sbjct: 347 GFCGVGKLGKALS-LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P T YT+ ++DTF + + L ME L
Sbjct: 406 PSKVT--YTI--------------LIDTFARSDNMEKAIQLRLSMEEL------------ 437
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
LV +V++Y+++I FC M+ A+ + + M +++ PN V +NT+I G+CK
Sbjct: 438 -------GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCK 490
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+ ++ +LL + E P+ ++ MI+ LC+ + ++A + +M++ G+ P+T
Sbjct: 491 EGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSI 550
Query: 363 YNILIRS 369
+++ R+
Sbjct: 551 LSLISRA 557
Score = 122 bits (305), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 137/281 (48%), Gaps = 1/281 (0%)
Query: 217 KPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATE 276
K +F Y +++ + ++ Y N + + V N +N ++ + ++
Sbjct: 91 KTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWS 150
Query: 277 ICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLC 336
E + + + ++ +F LI G C+ E+ K+ +LL+ L E GF P+ + ++ID C
Sbjct: 151 FFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCC 209
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
+ E A D EM + G+ N TY +LI L G + +++KMQ D + P++Y
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
T+N ++ C+ + + A + F M G+ + +Y+ LI L + + +EA + M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ +G NP+ T N +++ G+ +A + + K RG+S
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS 370
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 226/475 (47%), Gaps = 2/475 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ-CKPDRFTYNILIHGICRIGVVDE 63
G++P YN +ID +K A + ++ D P+ T+NI+I G+ + G VD+
Sbjct: 214 GVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDD 273
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
L++ ++M+ ++YTY+ LI G C+A V + V + ER + T +++
Sbjct: 274 CLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLG 333
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G RC ++ EL R ME + + N L+ L N EA I R M +GY
Sbjct: 334 GFCRCGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA 392
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
+ +T+ + L +N+ G++ G Y +++ L K R E +
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
+ K + N + N +I + + + A+ REM P +V++N LI G CK
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKA 512
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
+ + + +LE G+KPD T++ ++ LCR + + AL+ + ++ G+ + + +
Sbjct: 513 GKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMH 572
Query: 364 NILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLT 423
NILI LC++G + ++ + M+ + ++ T+N L++ F ++ +A + M
Sbjct: 573 NILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYK 632
Query: 424 LGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQ 478
+GL+PD SY+ ++K L A + F +G P YT N+++ +V +
Sbjct: 633 MGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/516 (23%), Positives = 216/516 (41%), Gaps = 45/516 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
G P+ R YN +++A V++ F P+ TYN+LI C+ ++
Sbjct: 108 FGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEK 167
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A + M G+ P+V++Y+ +I+ A ++ + + + M ER V P+ L+
Sbjct: 168 ARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILID 227
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKL-VCNTLLYRLSNNSMASEAAAILRKMGDRGYL 182
G + D A EL R +E + + N ++ LS + I +M
Sbjct: 228 GFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQN--- 284
Query: 183 PESSTFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVE 238
E YT + L+ GL ++++ + + +R TY ++ + G+ ++
Sbjct: 285 -EREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGK-IK 342
Query: 239 GDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLIS 298
L + + + N+ SYN++I + +D AT I R M + A + T+ I
Sbjct: 343 ESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIH 402
Query: 299 GHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP- 357
G C + V+K ++ + G D + + S+IDCLC+ R E+A + + EM + GV
Sbjct: 403 GLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVEL 462
Query: 358 ----------------------------------PNTITYNILIRSLCAIGDVARSLRLF 383
P ++YNILI LC G +
Sbjct: 463 NSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFV 522
Query: 384 QKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKS 443
++M + PD+ T++ L+ CR KI+ A + + L GL D ++ LI L
Sbjct: 523 KEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSV 582
Query: 444 GRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
G+ D+A +ME C + T N ++E + G
Sbjct: 583 GKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVG 618
Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 190/430 (44%), Gaps = 7/430 (1%)
Query: 75 GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
GYA + Y ++ + V V R++E+++ + +E S++ + P +A
Sbjct: 38 GYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQA 97
Query: 135 FELLIRFMER---EPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYT 191
++ R E EP + NTLL + ++ G P T++
Sbjct: 98 LDVFKRMREIFGCEPAIRSY--NTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVL 155
Query: 192 VTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRL 251
+ + + G LD K G KP +Y ++ L KAG+ + + + + +
Sbjct: 156 IKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGV 215
Query: 252 VSNVNSYNMVIDCFCKVNMMDRATEIC-REMRDRDIAPNLVTFNTLISGHCKDAEVHKTR 310
+V YN++ID F K A E+ R + D + PN+ T N +ISG K V
Sbjct: 216 APDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCL 275
Query: 311 ELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
++ + + + D +T++S+I LC A + A +E+ E + +TYN ++
Sbjct: 276 KIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF 335
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
C G + SL L++ M+ + S +I ++N LI+ KI++A + M G D
Sbjct: 336 CRCGKIKESLELWRIME-HKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 394
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+Y I L +G ++A +E +G + D Y I++ L ++ R EEA ++VK
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 454
Query: 491 SKERGISFKS 500
+ G+ S
Sbjct: 455 MSKHGVELNS 464
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/581 (22%), Positives = 247/581 (42%), Gaps = 93/581 (16%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFT-------------------- 47
PS YN +I A +K++ +D A L ++MS+ + D FT
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 48 ------------YNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR 95
Y LI G+C + +EA+ + +M PNV TY+ L+ G N K+
Sbjct: 293 VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQ 352
Query: 96 VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFME------------ 143
+ RVL +M P+ SLVH D A++LL + ++
Sbjct: 353 LGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNI 412
Query: 144 --------------------REPLTQKLVCNTLLYRLSNNSMA---------SEAAAILR 174
+ ++ L +L +++ +S +A +++R
Sbjct: 413 LIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIR 472
Query: 175 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 234
+M +G++P++ST+ + L + + + + G+ TY +++++ KAG
Sbjct: 473 EMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 532
Query: 235 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 294
+ ++ N + + NV +Y +I + K + A E+ M PN+VT++
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592
Query: 295 TLISGHCKDAEVHKTRELLVMLLECGFK------------------PDKFTFNSMIDCLC 336
LI GHCK +V K ++ + CG K P+ T+ +++D C
Sbjct: 593 ALIDGHCKAGQVEKACQIFERM--CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 650
Query: 337 RAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY 396
++HR E+A L M G PN I Y+ LI LC +G + + + +M +Y
Sbjct: 651 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 710
Query: 397 TFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSM 456
T+++LI + ++ + + A K ML P+ Y+ +I L K G+ DEA + M
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 457 EQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
E+ GC P+ T +++ G+ E ++++ +G++
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 811
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/515 (23%), Positives = 221/515 (42%), Gaps = 54/515 (10%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T Y+ V++ L ++ ++LA+L F++M D +TY I++ C+ G++++A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +M +G PNV TYT LI + AK+V+ + E M PN T +L+ G
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ KA ++ R+ + + ++ D P
Sbjct: 598 HCKAGQVEKACQIF-------------------ERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
T+ + + E +LD G +P Y L++ L K G+ E
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + + +Y+ +ID + KV D A+++ +M + APN+V + +I G CK
Sbjct: 699 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + +L+ M+ E G +P+ T+ +MID + E L+ L M GV PN +TY
Sbjct: 759 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 818
Query: 365 ILIRSLCAIG--DVAR-------------------------------SLRLFQKMQADRI 391
+LI C G DVA SL L ++ D
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDT 878
Query: 392 SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFS--YSALIKALIKSGRFDEA 449
+P + + LI + + ++E A + + T ++S Y++LI++L + + + A
Sbjct: 879 APFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETA 938
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
Q F M + G P+ + +++ L + + EA
Sbjct: 939 FQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 203/478 (42%), Gaps = 24/478 (5%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGIC------RI 58
G PS +++N+++ A S AY ++M P YNILI IC
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 59 GVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATV 118
++D A + +M G N + C+A + + F V+ M + P+ +T
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 119 RSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLY-RLSNNSMASEAAAILRKMG 177
+++ + AF LL M+R L + T++ + +A +M
Sbjct: 487 SKVLNYLCNASKMELAF-LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545
Query: 178 DRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG--- 234
+ G P T+ + + ++ + +T + G P TY L++ KAG
Sbjct: 546 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 605
Query: 235 ------------RDV-EGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREM 281
+DV + D Y + NV +Y ++D FCK + ++ A ++ M
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Query: 282 RDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRF 341
PN + ++ LI G CK ++ + +E+ + E GF +T++S+ID + R
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 725
Query: 342 EDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNAL 401
+ A LS+M+E PN + Y +I LC +G + +L Q M+ P++ T+ A+
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785
Query: 402 IQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
I F + KIE + M + G+ P+ +Y LI K+G D A M+Q
Sbjct: 786 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT 843
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/546 (21%), Positives = 217/546 (39%), Gaps = 54/546 (9%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G + +YNA++D +V+ + + QQ+ D + N+L+ CR G
Sbjct: 159 IGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSI 218
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKR---------------------------- 95
AL + +++ + P+ TY LI F A R
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 96 ----VAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKL 151
V + L +++ N P+ L+ G+ +A + L R L +
Sbjct: 279 SLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVV 338
Query: 152 VCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
+TLL N +L M G P F+ V T D + +L
Sbjct: 339 TYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 398
Query: 212 IKRGVKPRFSTYLLLMEALYKAGRDVEGD------RYLNHVFKDRLVSNVNSYNMVIDCF 265
+K G P + Y +L+ ++ + D + + + +V N + + C
Sbjct: 399 VKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCL 458
Query: 266 CKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDK 325
C ++A + REM + P+ T++ +++ C +++ L + G D
Sbjct: 459 CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV 518
Query: 326 FTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQK 385
+T+ M+D C+A E A +EM E G PN +TY LI + V+ + LF+
Sbjct: 519 YTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFET 578
Query: 386 MQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL----------------GLRPD 429
M ++ P+I T++ALI C+ ++EKA + F M RP+
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 430 NFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVK 489
+Y AL+ KS R +EA++ +M GC P+ + +++ L + G+ +EA ++
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Query: 490 TSKERG 495
E G
Sbjct: 699 EMSEHG 704
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 199/464 (42%), Gaps = 55/464 (11%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G +P+ Y A+I A +K+ + A F+ M + C P+ TY+ LI G C+ G V++
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 64 ALRLVKQMEGL----------------GYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMK 107
A ++ ++M G PNV TY L+DGFC + RV E ++L+ M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
PN+ +L+ G+ + +A E+ E ++L+ R
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
A+ +L KM L +C P Y ++
Sbjct: 727 LASKVLSKM------------------------LENSCA-----------PNVVIYTEMI 751
Query: 228 EALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIA 287
+ L K G+ E + + + + NV +Y +ID F + ++ E+ M + +A
Sbjct: 752 DGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 811
Query: 288 PNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDC 347
PN VT+ LI CK+ + LL + + + + +I+ + F ++L
Sbjct: 812 PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGL 869
Query: 348 LSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIY--TFNALIQSF 405
L E+ + P Y +LI +L + +LRL +++ + Y T+N+LI+S
Sbjct: 870 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESL 929
Query: 406 CRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
C NK+E A + F M G+ P+ S+ +LIK L ++ + EA
Sbjct: 930 CLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 149/343 (43%), Gaps = 39/343 (11%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P+ Y A++D KS+ ++ A MS++ C+P++ Y+ LI G+C++G +DEA +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 68 VKQMEGLGY-----------------------------------APNVYTYTILIDGFCN 92
+M G+ APNV YT +IDG C
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
+ E ++++++M+E+ PN T +++ G ELL R + +
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
L+ N A +L +M + ++ + + + E+ G+LD
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIG 874
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV--FKDRLVSNVNSYNMVIDCFCKVNM 270
+ P S Y LL++ L KA R R L V F LV ++YN +I+ C N
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934
Query: 271 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
++ A ++ EM + + P + +F +LI G +++++ + LL
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 103/247 (41%), Gaps = 36/247 (14%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
+P+ +Y +ID L K D AY Q M C+P+ TY +I G IG ++ L
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG-- 124
L+++M G APN TY +LID C + +LE MK+ + + A R ++ G
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFN 860
Query: 125 -----------------------VFRCLDPH----KAFELLIRFMER-EPLTQKLV---- 152
V+R L + + E+ +R +E + LV
Sbjct: 861 KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSS 920
Query: 153 -CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTF 211
N+L+ L + A + +M +G +PE +F + L ++E +LD F
Sbjct: 921 TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD-F 979
Query: 212 IKRGVKP 218
I V P
Sbjct: 980 ISHMVCP 986
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Query: 318 ECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVA 377
+ G+K +N+++D + R + + L ++ + N+L+R C G +
Sbjct: 158 QIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFS 217
Query: 378 RSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALI 437
+L +++ R P T+N LIQ+F + ++++ A M LR D F+
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFA 277
Query: 438 KALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIV 488
+L K G++ EA +E PD+ ++ L + FEEA D +
Sbjct: 278 YSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFL 325
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/457 (29%), Positives = 220/457 (48%), Gaps = 40/457 (8%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
PS ++ V+ + KS + DL F M V D ++YNI+I+ +CR AL +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
V +M GY P+V T + LI+GFC RV + ++ M+E P+ +++ G +
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ A EL R MER+ + V N+L+ L + S+AA ++R M R +P
Sbjct: 187 IGLVNDAVELFDR-MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 187 TFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHV 246
TF ++D F+K G +FS + L E + + R V+ D
Sbjct: 246 TF----------------TAVIDVFVKEG---KFSEAMKLYEEMTR--RCVDPD------ 278
Query: 247 FKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEV 306
V +YN +I+ C +D A ++ M + P++VT+NTLI+G CK V
Sbjct: 279 --------VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Query: 307 HKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNIL 366
+ +L + + G D T+N++I +A R + A + S M PN TY+IL
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSIL 387
Query: 367 IRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 426
+ LC V ++L LF+ MQ I DI T+N +I C++ +E A F S+ GL
Sbjct: 388 LYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL 447
Query: 427 RPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+PD SY+ +I + ++D++ + M+++G P
Sbjct: 448 KPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 190/424 (44%), Gaps = 38/424 (8%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI YN VI+ L + + +A +M +PD T + LI+G C+ V +A
Sbjct: 99 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ LV +ME +G+ P+V Y +IDG C V + + + M+ V + T SLV G
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 218
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
L C + S+AA ++R M R +P
Sbjct: 219 --------------------------LCC---------SGRWSDAARLMRDMVMRDIVPN 243
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF + V +E + + +R V P TY L+ L GR E + L+
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 303
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + +V +YN +I+ FCK +D T++ REM R + + +T+NT+I G+ +
Sbjct: 304 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+E+ + +P+ T++ ++ LC R E AL M + + + TYN
Sbjct: 364 RPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
I+I +C IG+V + LF+ + + PD+ ++ +I FCR + +K++ + M
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 480
Query: 425 GLRP 428
GL P
Sbjct: 481 GLLP 484
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 206/456 (45%), Gaps = 42/456 (9%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P ++ ++ I + D + L ME G ++Y+Y I+I+ C R V
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
+ M + P+ TV SL++G
Sbjct: 127 VGKMMKFGYEPDVVTVSSLING-----------------------------------FCQ 151
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTV--TCLVTGLDLNETCGILDTFIKRGVKPRF 220
+ +A ++ KM + G+ P+ ++ + +C + GL +N+ + D + GV+
Sbjct: 152 GNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKI-GL-VNDAVELFDRMERDGVRADA 209
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY L+ L +GR + R + + +V NV ++ VID F K A ++ E
Sbjct: 210 VTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 269
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 340
M R + P++ T+N+LI+G C V + +++L +++ G PD T+N++I+ C++ R
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329
Query: 341 FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 400
++ EM + G+ +TITYN +I+ G + +F +M + P+I T++
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSI 386
Query: 401 LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 460
L+ C ++EKA F +M + D +Y+ +I + K G ++A F S+ G
Sbjct: 387 LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG 446
Query: 461 CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
PD + ++ ++ +++++ + + +E G+
Sbjct: 447 LKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 150/320 (46%), Gaps = 3/320 (0%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+G P +YN +ID K ++ A F +M D + D TYN L+ G+C G +
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 227
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A RL++ M PNV T+T +ID F + +E ++ E M R V P+ T SL++
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
G+ +A ++L + + L + NTL+ + E + R+M RG +
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
Query: 184 ESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYL 243
++ T++ T + + F + +P TY +L+ L R +
Sbjct: 348 DTITYN---TIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 244 NHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKD 303
++ K + ++ +YN+VI CK+ ++ A ++ R + + + P++V++ T+ISG C+
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Query: 304 AEVHKTRELLVMLLECGFKP 323
+ K+ L + E G P
Sbjct: 465 RQWDKSDLLYRKMQEDGLLP 484
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 127/250 (50%)
Query: 246 VFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAE 305
+ + R + ++ ++ V+ K D + M I +L ++N +I+ C+ +
Sbjct: 60 MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 119
Query: 306 VHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNI 365
++ +++ G++PD T +S+I+ C+ +R DA+D +S+M E G P+ + YN
Sbjct: 120 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 179
Query: 366 LIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLG 425
+I C IG V ++ LF +M+ D + D T+N+L+ C + A + M+
Sbjct: 180 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239
Query: 426 LRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAH 485
+ P+ +++A+I +K G+F EA + + M + +PD +T N ++ L GR +EA
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 299
Query: 486 DIVKTSKERG 495
++ +G
Sbjct: 300 QMLDLMVTKG 309
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 185 bits (470), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 213/466 (45%), Gaps = 8/466 (1%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
+ ISP+ +N VI AL K +D A F+ M +C PD +TY L+ G+C+ +DE
Sbjct: 181 MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A+ L+ +M+ G +P+ Y +LIDG C + V ++++ M + PNE T +L+H
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIH 300
Query: 124 GVFRCLDPH--KAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
G+ CL KA LL R + + + + TL+ L A++A +L M +RGY
Sbjct: 301 GL--CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
+ ++ L E + ++G KP Y +L++ L + G+ E
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 242 YLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHC 301
LN + + N +Y+ ++ F K + + A ++ +EM + N ++ LI G C
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVP---P 358
V + + +L G KPD ++S+I LC + AL EM+ P P
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538
Query: 359 NTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC-RMNKIEKAEKA 417
+ +TYNIL+ LC D++R++ L M PD+ T N + + + N +K
Sbjct: 539 DVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSF 598
Query: 418 FFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
++ L+ S + I ++ T+ + + C P
Sbjct: 599 LEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKP 644
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 197/439 (44%), Gaps = 38/439 (8%)
Query: 43 PDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRV 102
P+ ++N++I +C++ VD A+ + + M P+ YTY L+DG C +R+ E +
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 244
Query: 103 LEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSN 162
L+ M+ P+ L+ G+ + D + +L+ + + ++ NTL++ L
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 304
Query: 163 NSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFST 222
+A ++L +M +P T+ + LV + +L + +RG
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364
Query: 223 YLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMR 282
Y +L+ L+K G+ E A + R+M
Sbjct: 365 YSVLISGLFKEGKAEE-----------------------------------AMSLWRKMA 389
Query: 283 DRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFE 342
++ PN+V ++ L+ G C++ + ++ +E+L ++ G P+ +T++S++ + E
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCE 449
Query: 343 DALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALI 402
+A+ EM + G N Y++LI LC +G V ++ ++ KM I PD ++++I
Sbjct: 450 EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII 509
Query: 403 QSFCRMNKIEKAEKAFFSMLTL---GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
+ C + ++ A K + ML +PD +Y+ L+ L A SM
Sbjct: 510 KGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDR 569
Query: 460 GCNPDSYTSNLILETLVQQ 478
GC+PD T N L TL ++
Sbjct: 570 GCDPDVITCNTFLNTLSEK 588
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 186/432 (43%), Gaps = 26/432 (6%)
Query: 8 PSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRL 67
P Y ++D L K ID A L +M + C P YN+LI G+C+ G + +L
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKL 279
Query: 68 VKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFR 127
V M G PN TY LI G C ++ + +LE M PN+ T +L++G+ +
Sbjct: 280 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK 339
Query: 128 CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESST 187
A LL ER + + + L+ L A EA ++ RKM ++G P
Sbjct: 340 QRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVV 399
Query: 188 FDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVF 247
+ V L NE IL+ I G P TY LM+ +K G E + +
Sbjct: 400 YSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMD 459
Query: 248 KDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK----D 303
K N Y+++ID C V + A + +M I P+ V ++++I G C D
Sbjct: 460 KTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMD 519
Query: 304 AEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITY 363
A + E+L E +PD T+N ++D LC A+D L+ M++ G P+ IT
Sbjct: 520 AALKLYHEMLCQ-EEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITC 578
Query: 364 NILIRSLCAIG---DVARS------LRLFQK------------MQADRISPDIYTFNALI 402
N + +L D RS +RL ++ M ++P T+ ++
Sbjct: 579 NTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIV 638
Query: 403 QSFCRMNKIEKA 414
+ C+ KI A
Sbjct: 639 REICKPKKINAA 650
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 207/494 (41%), Gaps = 45/494 (9%)
Query: 11 RLYNAVIDALVKSNSIDLAYLKFQQMSVDQ--CKPDRFTYNILIHGICRIGVVDEALR-- 66
R + V A K++ D A F +M VD+ CK ++N +++ I G+ L
Sbjct: 113 RSFIVVFRAYGKAHLPDKAVDLFHRM-VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFY 171
Query: 67 --LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+V + +PN ++ ++I C + V V M ER P+ T +L+ G
Sbjct: 172 DYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDG 231
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
L EA +L +M G P
Sbjct: 232 -----------------------------------LCKEERIDEAVLLLDEMQSEGCSPS 256
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
++ + L DL ++D +G P TY L+ L G+ + L
Sbjct: 257 PVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLE 316
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ + + N +Y +I+ K A + M +R N ++ LISG K+
Sbjct: 317 RMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEG 376
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + L + E G KP+ ++ ++D LCR + +A + L+ M+ G PN TY+
Sbjct: 377 KAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYS 436
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L++ G +++++++M S + + ++ LI C + ++++A + MLT+
Sbjct: 437 SLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTI 496
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSM---EQNGCNPDSYTSNLILETLVQQGRF 481
G++PD +YS++IK L G D A + + M E+ PD T N++L+ L Q
Sbjct: 497 GIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDI 556
Query: 482 EEAHDIVKTSKERG 495
A D++ + +RG
Sbjct: 557 SRAVDLLNSMLDRG 570
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 148/333 (44%), Gaps = 40/333 (12%)
Query: 207 ILDTF-IKRGVKPRFSTYL--LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVID 263
++D F KR VK F++ L ++ E LY G + D +N + N S+N+VI
Sbjct: 138 MVDEFRCKRSVK-SFNSVLNVIINEGLYHRGLEFY-DYVVNSNMNMNISPNGLSFNLVIK 195
Query: 264 CFCKVNMMDRATEICR-----------------------------------EMRDRDIAP 288
CK+ +DRA E+ R EM+ +P
Sbjct: 196 ALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSP 255
Query: 289 NLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCL 348
+ V +N LI G CK ++ + +L+ + G P++ T+N++I LC + + A+ L
Sbjct: 256 SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL 315
Query: 349 SEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRM 408
MV PN +TY LI L ++RL M+ + + ++ LI +
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKE 375
Query: 409 NKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTS 468
K E+A + M G +P+ YS L+ L + G+ +EAK+ M +GC P++YT
Sbjct: 376 GKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTY 435
Query: 469 NLILETLVQQGRFEEAHDIVKTSKERGISFKSF 501
+ +++ + G EEA + K + G S F
Sbjct: 436 SSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKF 468
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 214/488 (43%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P T YNA++ K+ A ++M + C D TYN L+ R G EA
Sbjct: 311 GYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEA 370
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+++ M G PN TYT +ID + A + E ++ MKE PN T +++
Sbjct: 371 AGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSL 430
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPE 184
+ + ++ ++L + NT+L N M + R+M G+ P+
Sbjct: 431 LGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPD 490
Query: 185 SSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLN 244
TF+ ++ + + + G +TY L+ AL + G G+ ++
Sbjct: 491 RDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVIS 550
Query: 245 HVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+ SY++++ C+ K I +++ I P+ + TL+ + K
Sbjct: 551 DMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCR 610
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYN 364
+ + + + G+KPD FNSM+ R + ++ A L + E G+ P+ +TYN
Sbjct: 611 ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYN 670
Query: 365 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 424
L+ G+ ++ + + ++ ++ PD+ ++N +I+ FCR +++A + M
Sbjct: 671 SLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTER 730
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G+RP F+Y+ + G F E + M +N C P+ T ++++ + G++ EA
Sbjct: 731 GIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Query: 485 HDIVKTSK 492
D V K
Sbjct: 791 MDFVSKIK 798
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/486 (23%), Positives = 221/486 (45%), Gaps = 42/486 (8%)
Query: 44 DRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVA-EVFRV 102
D Y ++H R G ++A+ L ++M+ +G +P + TY +++D F R ++ V
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 103 LEIMKERNVCPNEATVRSLVHGVFR--CLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 160
L+ M+ + + +E T +++ R L K F ++ EP T + N LL
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGT--VTYNALLQVF 326
Query: 161 SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 220
+ +EA ++L++M + +S T++ V V E G+++ K+GV P
Sbjct: 327 GKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNA 386
Query: 221 STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 280
TY +++A KAG++ E + + + V N +YN V+ K + + ++ +
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 281 MRDRDIAPNLVTFNTLISGHCKDAEVHK-TRELLVMLLECGFKPDKFTFNSMIDCLCRAH 339
M+ +PN T+NT+++ C + + K + + CGF+PD+ TFN++I R
Sbjct: 447 MKSNGCSPNRATWNTMLA-LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCG 505
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
DA EM G TYN L+ +L GD + M++ P +++
Sbjct: 506 SEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYS 565
Query: 400 ALIQSFCR------MNKIEK-----------------------------AEKAFFSMLTL 424
++Q + + + +IE +E+AF
Sbjct: 566 LMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKH 625
Query: 425 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 484
G +PD +++++ ++ +D+A+ S+ ++G +PD T N +++ V++G +A
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 485 HDIVKT 490
+I+KT
Sbjct: 686 EEILKT 691
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 124/247 (50%), Gaps = 5/247 (2%)
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
+V +Y ++ + + ++A ++ M++ +P LVT+N ++ K R++L
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMG--RSWRKIL 266
Query: 314 VMLLEC---GFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSL 370
+L E G K D+FT ++++ R +A + +E+ G P T+TYN L++
Sbjct: 267 GVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVF 326
Query: 371 CAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDN 430
G +L + ++M+ + D T+N L+ ++ R ++A M G+ P+
Sbjct: 327 GKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNA 386
Query: 431 FSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKT 490
+Y+ +I A K+G+ DEA + F SM++ GC P++ T N +L L ++ R E ++
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 491 SKERGIS 497
K G S
Sbjct: 447 MKSNGCS 453
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+SP YN+++D V+ A + + Q KPD +YN +I G CR G++ EA
Sbjct: 661 GLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEA 720
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+R++ +M G P ++TY + G+ AE+ V+E M + + PNE T + +V G
Sbjct: 721 VRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDG 780
Query: 125 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNN 163
R +A + + + +P L R+ N
Sbjct: 781 YCRAGKYSEAMDFVSKIKTFDPCFDDQSIQRLALRVREN 819
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/424 (20%), Positives = 161/424 (37%), Gaps = 56/424 (13%)
Query: 108 ERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMAS 167
ER V E V S G + LD H+ E+ +R + RE S S
Sbjct: 153 ERAVFLFEWLVLSSNSGALK-LD-HQVIEIFVRILGRE------------------SQYS 192
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
AA +L K+ + YL + + + + + + + G P TY +++
Sbjct: 193 VAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVIL 252
Query: 228 EALYKAGRDVEGD-RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
+ K GR L+ + L + + + V+ + ++ A E E++
Sbjct: 253 DVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGY 312
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
P VT+N L+ K + +L + E D T+N ++ RA ++A
Sbjct: 313 EPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAG 372
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ--- 403
+ M + GV PN ITY +I + G +L+LF M+ P+ T+NA++
Sbjct: 373 VIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLG 432
Query: 404 -------------------------------SFCRMNKIEK-AEKAFFSMLTLGLRPDNF 431
+ C ++K + F M + G PD
Sbjct: 433 KKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRD 492
Query: 432 SYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTS 491
+++ LI A + G +A + + M + G N T N +L L ++G + +++
Sbjct: 493 TFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDM 552
Query: 492 KERG 495
K +G
Sbjct: 553 KSKG 556
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/319 (18%), Positives = 125/319 (39%), Gaps = 41/319 (12%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G P +N +I A + S A + +M+ TYN L++ + R G
Sbjct: 486 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 545
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
++ M+ G+ P +Y++++ + + R+ +KE + P+ +R+L+
Sbjct: 546 ENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLA 605
Query: 125 VFRC---LDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGY 181
F+C +AF L + + + ++ N++L + N+M +A IL + + G
Sbjct: 606 NFKCRALAGSERAFTLFKKHGYKPDM---VIFNSMLSIFTRNNMYDQAEGILESIREDGL 662
Query: 182 LPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDR 241
P+ T++ + V + + IL T K +KP +Y +++ + G E R
Sbjct: 663 SPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVR 722
Query: 242 YLNHVFKDRLVSNVNSYN-----------------------------------MVIDCFC 266
L+ + + + + +YN MV+D +C
Sbjct: 723 MLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYC 782
Query: 267 KVNMMDRATEICREMRDRD 285
+ A + +++ D
Sbjct: 783 RAGKYSEAMDFVSKIKTFD 801
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/489 (25%), Positives = 226/489 (46%), Gaps = 15/489 (3%)
Query: 7 SPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALR 66
SP ++ ++++ LV+ D ++ +Q M PD Y +L + G+ + +
Sbjct: 161 SPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEK 220
Query: 67 LVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVF 126
L+ +M LG PNVY YTI I C ++ E ++ E+MK+ V PN T +++ G
Sbjct: 221 LLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYC 280
Query: 127 RCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESS 186
+ + +A+ L + E L +V TL+ A ++ M G P
Sbjct: 281 KTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNL- 339
Query: 187 TFDYTVTCLVTGL----DLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
Y CL+ G ++ E G+L + P TY +L+ L + E +R
Sbjct: 340 ---YVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRL 396
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
+ +R+ + +YN +I +CK M++A ++C EM + PN++TF+TLI G+C
Sbjct: 397 FQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCN 456
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
++ L + G PD T+ ++ID + ++AL S+M+E G+ PN T
Sbjct: 457 VRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHT 516
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+ L+ G ++ ++ +Q+ R + F LI+ C+ I +A + F M
Sbjct: 517 FACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMR 576
Query: 423 TLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFE 482
+ G+ PD SY +++K ++ R + M + G P NL++ L+ RF
Sbjct: 577 SCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILP-----NLLVNQLL--ARFY 629
Query: 483 EAHDIVKTS 491
+A+ VK++
Sbjct: 630 QANGYVKSA 638
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 164/354 (46%), Gaps = 35/354 (9%)
Query: 176 MGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGR 235
M RG +P+ + C ++ +LD G+KP Y + + L + +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 236 DVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNT 295
E ++ + K ++ N+ +Y+ +ID +CK + +A + +E+ ++ PN+V F T
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 296 LISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWG 355
L+ G CK E+ R L V +++ G P+ + +N +I C++ +A+ LSEM
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 356 VPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI------------------------ 391
+ P+ TY ILI LC VA + RLFQKM+ +RI
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 392 -----------SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKAL 440
P+I TF+ LI +C + I+ A +F M G+ PD +Y+ALI A
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489
Query: 441 IKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
K EA + + M + G +P+ +T +++ ++GR A D + + ++
Sbjct: 490 FKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQ 543
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 184/427 (43%), Gaps = 37/427 (8%)
Query: 4 LGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDE 63
LGI P+ +Y I L + N ++ A F+ M P+ +TY+ +I G C+ G V +
Sbjct: 228 LGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQ 287
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
A L K++ PNV + L+DGFC A+ + + M + V PN L+H
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYR-LSNNSMASEAAAILRKMGDRGYL 182
G + + +A LL ME L+ + T+L L +EA + +KM +
Sbjct: 348 GHCKSGNMLEAVGLLSE-MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIF 406
Query: 183 PESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRY 242
P S+T++ + ++ + + GV+P
Sbjct: 407 PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP------------------------ 442
Query: 243 LNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCK 302
N+ +++ +ID +C V + A + EM + I P++VT+ LI H K
Sbjct: 443 -----------NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFK 491
Query: 303 DAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTIT 362
+A + + L +LE G P+ TF ++D + R A+D E + N +
Sbjct: 492 EANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVG 551
Query: 363 YNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSML 422
+ LI LC G + R+ R F M++ I+PDI ++ ++++ + +I M+
Sbjct: 552 FTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMI 611
Query: 423 TLGLRPD 429
G+ P+
Sbjct: 612 KTGILPN 618
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 192/451 (42%), Gaps = 3/451 (0%)
Query: 47 TYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM 106
+++LI +G+ +EAL + ++M+ +P+ +++G +R V+ ++M
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREMKC---SPDSKACLSILNGLVRRRRFDSVWVDYQLM 190
Query: 107 KERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMA 166
R + P+ L F+ K +LL + + L ++
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250
Query: 167 SEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLL 226
EA + M G LP T+ + ++ + G+ + + P + L
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 227 MEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
++ KA V H+ K + N+ YN +I CK M A + EM ++
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALD 346
+P++ T+ LI+G C + +V + L + P T+NS+I C+ + E ALD
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430
Query: 347 CLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFC 406
SEM GV PN IT++ LI C + D+ ++ L+ +M I PD+ T+ ALI +
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHF 490
Query: 407 RMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSY 466
+ +++A + + ML G+ P++ +++ L+ K GR A + Q +
Sbjct: 491 KEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHV 550
Query: 467 TSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
++E L Q G A + GI+
Sbjct: 551 GFTCLIEGLCQNGYILRASRFFSDMRSCGIT 581
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 210/432 (48%), Gaps = 1/432 (0%)
Query: 33 FQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCN 92
F M+ P ++ L+ I ++ + + L + +E LG + ++Y++T LID FC
Sbjct: 67 FCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCR 126
Query: 93 AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLV 152
R++ L M + P+ T SLV+G ++A L+ + + ++
Sbjct: 127 CARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVI 186
Query: 153 CNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFI 212
NT++ L + A +L+ M G P+ T++ +T L + IL +
Sbjct: 187 YNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM 246
Query: 213 KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMD 272
+ G+ P T+ L++ K G+ +E + N + + + N+ +YN +I+ C ++D
Sbjct: 247 RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLD 306
Query: 273 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 332
A ++ + + PN VT+NTLI+G+CK V ++L ++ G D FT+N++
Sbjct: 307 EAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLY 366
Query: 333 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 392
C+A +F A L MV GV P+ T+NIL+ LC G + ++L + +Q +
Sbjct: 367 QGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTV 426
Query: 393 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQT 452
I T+N +I+ C+ +K+E A F S+ G+ PD +Y ++ L + + EA +
Sbjct: 427 VGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHEL 486
Query: 453 FLSME-QNGCNP 463
+ M+ ++G P
Sbjct: 487 YRKMQKEDGLMP 498
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 176/421 (41%), Gaps = 35/421 (8%)
Query: 1 ISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV 60
+ LGIS + +ID + + LA +M +P T+ L++G C +
Sbjct: 105 LEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNR 164
Query: 61 VDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRS 120
EA+ LV Q+ GLGY PNV Y +ID C +V VL+ MK+ + P+ T
Sbjct: 165 FYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTY-- 222
Query: 121 LVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 180
N+L+ RL ++ +A IL M G
Sbjct: 223 ---------------------------------NSLITRLFHSGTWGVSARILSDMMRMG 249
Query: 181 YLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGD 240
P+ TF + L E + I+R V P TY L+ L G E
Sbjct: 250 ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAK 309
Query: 241 RYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGH 300
+ LN + N +YN +I+ +CK +D +I M + + T+NTL G+
Sbjct: 310 KVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGY 369
Query: 301 CKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
C+ + ++L ++ CG PD +TFN ++D LC + AL L ++ +
Sbjct: 370 CQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGI 429
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
ITYNI+I+ LC V + LF + +SPD+ T+ ++ R +A + +
Sbjct: 430 ITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRK 489
Query: 421 M 421
M
Sbjct: 490 M 490
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 165/367 (44%), Gaps = 4/367 (1%)
Query: 134 AFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVT 193
A L E PL + + LL ++ + ++ R + G + +F +
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 194 CLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVS 253
C L+ L +K G +P T+ L+ R E ++ +
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 254 NVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELL 313
NV YN +ID C+ ++ A ++ + M+ I P++VT+N+LI+ + +L
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 314 VMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAI 373
++ G PD TF+++ID + + +A +EM++ V PN +TYN LI LC
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302
Query: 374 GDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSY 433
G + + ++ + + P+ T+N LI +C+ +++ K M G+ D F+Y
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362
Query: 434 SALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA----HDIVK 489
+ L + ++G+F A++ M G +PD YT N++L+ L G+ +A D+ K
Sbjct: 363 NTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQK 422
Query: 490 TSKERGI 496
+ GI
Sbjct: 423 SKTVVGI 429
Score = 132 bits (331), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 124/245 (50%)
Query: 257 SYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVML 316
S+ +IDCFC+ + A +M P++VTF +L++G C ++ L+ +
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 317 LECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDV 376
+ G++P+ +N++ID LC + ALD L M + G+ P+ +TYN LI L G
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 377 ARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSAL 436
S R+ M ISPD+ TF+ALI + + ++ +A+K + M+ + P+ +Y++L
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 437 IKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
I L G DEAK+ + G P++ T N ++ + R ++ I+ G+
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 497 SFKSF 501
+F
Sbjct: 356 DGDTF 360
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 181/393 (46%), Gaps = 2/393 (0%)
Query: 106 MKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVC-NTLLYRLSNNS 164
M E + P+ L+ + + L+ ++A L R +E ++ L TL+ +
Sbjct: 70 MAESHPLPSIVDFSRLLIAIAK-LNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCA 128
Query: 165 MASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYL 224
S A + L KM G+ P TF V E ++D + G +P Y
Sbjct: 129 RLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYN 188
Query: 225 LLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 284
++++L + G+ L H+ K + +V +YN +I + I +M
Sbjct: 189 TIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRM 248
Query: 285 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 344
I+P+++TF+ LI + K+ ++ + ++ +++ P+ T+NS+I+ LC ++A
Sbjct: 249 GISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEA 308
Query: 345 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 404
L+ +V G PN +TYN LI C V +++ M D + D +T+N L Q
Sbjct: 309 KKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQG 368
Query: 405 FCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 464
+C+ K AEK M++ G+ PD ++++ L+ L G+ +A ++++
Sbjct: 369 YCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVG 428
Query: 465 SYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
T N+I++ L + + E+A + + +G+S
Sbjct: 429 IITYNIIIKGLCKADKVEDAWYLFCSLALKGVS 461
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 119/286 (41%), Gaps = 50/286 (17%)
Query: 247 FKDRLVSNVNS--YNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDA 304
+++RL S ++S +N + FC +M + P++V F+ L+ K
Sbjct: 47 YRERLRSGLHSIKFNDALTLFC-------------DMAESHPLPSIVDFSRLLIAIAKLN 93
Query: 305 EVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEM------------- 351
+ L L G D ++F ++IDC CR R AL CL +M
Sbjct: 94 KYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFG 153
Query: 352 ----------------------VEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQAD 389
V G PN + YN +I SLC G V +L + + M+
Sbjct: 154 SLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKM 213
Query: 390 RISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEA 449
I PD+ T+N+LI + + M+ +G+ PD ++SALI K G+ EA
Sbjct: 214 GIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA 273
Query: 450 KQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERG 495
K+ + M Q NP+ T N ++ L G +EA ++ +G
Sbjct: 274 KKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKG 319
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%)
Query: 340 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 399
+F DAL +M E P+ + ++ L+ ++ + + LF+ ++ IS D+Y+F
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 400 ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 459
LI FCR ++ A M+ LG P ++ +L+ RF EA +
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 460 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 496
G P+ N I+++L ++G+ A D++K K+ GI
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGI 215
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ T YN + ++ A +M PD +T+NIL+ G+C G + +A
Sbjct: 354 GVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKA 413
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
L ++ ++ + TY I+I G C A +V + + + + + V P+ T +++ G
Sbjct: 414 LVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIG 473
Query: 125 VFRCLDPHKAFELLIRFMERE 145
+ R +A EL R M++E
Sbjct: 474 LRRKRLWREAHELY-RKMQKE 493
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G+ P +N ++D L I A ++ + + + TYNI+I G+C+ V++A
Sbjct: 389 GVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDA 448
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIM-KERNVCP 113
L + G +P+V TY ++ G + E + M KE + P
Sbjct: 449 WYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 216/490 (44%), Gaps = 10/490 (2%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
G S YNA++D KS+ A +M ++ P TYN LI R G++DEA
Sbjct: 309 GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEA 368
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLV-- 122
+ L QM G P+V+TYT L+ GF A +V + E M+ PN T + +
Sbjct: 369 MELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKM 428
Query: 123 HGVFRCLDPHKAFELLIRFMERE--PLTQKLVC-NTLLYRLSNNSMASEAAAILRKMGDR 179
+G + K E++ F E L+ +V NTLL N M SE + + ++M
Sbjct: 429 YG-----NRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA 483
Query: 180 GYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
G++PE TF+ ++ + + + GV P STY ++ AL + G +
Sbjct: 484 GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS 543
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
++ L + R N +Y ++ + + + E+ I P V TL+
Sbjct: 544 EKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLV 603
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
K + + L E GF PD T NSM+ R A L M E G P+
Sbjct: 604 CSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPS 663
Query: 360 TITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFF 419
TYN L+ D +S + +++ A I PDI ++N +I ++CR ++ A + F
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 420 SMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M G+ PD +Y+ I + F+EA M ++GC P+ T N I++ +
Sbjct: 724 EMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLN 783
Query: 480 RFEEAHDIVK 489
R +EA V+
Sbjct: 784 RKDEAKLFVE 793
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/560 (22%), Positives = 230/560 (41%), Gaps = 79/560 (14%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGV-VDE 63
G S Y ++I A S A F++M D CKP TYN++++ ++G ++
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 64 ALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVH 123
LV++M+ G AP+ YTY LI E +V E MK ++ T +L+
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 124 GVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLP 183
+ P +A ++L + + N+L+ + + M EA + +M ++G P
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 184 ESSTFDYTVTCLVTGLD----LNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEG 239
+ +T T L++G + + I + G KP T+ ++ G+ E
Sbjct: 383 DV----FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 240 DRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISG 299
+ + + L ++ ++N ++ F + M + + +EM+ P TFNTLIS
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 300 HCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPN 359
+ + + + +L+ G PD T+N+++ L R +E + L+EM + PN
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN 558
Query: 360 TITY-------------------------------NILIRSL---CAIGD-VARSLRLFQ 384
+TY +L+++L C+ D + + R F
Sbjct: 559 ELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFS 618
Query: 385 KMQADRISPDIYTFNALIQSFCRMNKIEKA------------------------------ 414
+++ SPDI T N+++ + R + KA
Sbjct: 619 ELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSA 678
Query: 415 -----EKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSN 469
E+ +L G++PD SY+ +I A ++ R +A + F M +G PD T N
Sbjct: 679 DFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYN 738
Query: 470 LILETLVQQGRFEEAHDIVK 489
+ + FEEA +V+
Sbjct: 739 TFIGSYAADSMFEEAIGVVR 758
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 189/439 (43%), Gaps = 34/439 (7%)
Query: 29 AYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLGYAPNVYTYTILID 88
A+ F + Q D I+I + + G V A + ++ G++ +VY+YT LI
Sbjct: 157 AFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLIS 216
Query: 89 GFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLT 148
F N+ R E V + M+E P T +++ + P
Sbjct: 217 AFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPW---------------- 260
Query: 149 QKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGIL 208
++ +++ KM G P++ T++ +TC G E +
Sbjct: 261 ------------------NKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVF 302
Query: 209 DTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKV 268
+ G TY L++ K+ R E + LN + + ++ +YN +I + +
Sbjct: 303 EEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARD 362
Query: 269 NMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTF 328
M+D A E+ +M ++ P++ T+ TL+SG + +V + + G KP+ TF
Sbjct: 363 GMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTF 422
Query: 329 NSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQA 388
N+ I +F + + E+ G+ P+ +T+N L+ G + +F++M+
Sbjct: 423 NAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 482
Query: 389 DRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDE 448
P+ TFN LI ++ R E+A + ML G+ PD +Y+ ++ AL + G +++
Sbjct: 483 AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQ 542
Query: 449 AKQTFLSMEQNGCNPDSYT 467
+++ ME C P+ T
Sbjct: 543 SEKVLAEMEDGRCKPNELT 561
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/483 (21%), Positives = 206/483 (42%), Gaps = 1/483 (0%)
Query: 16 VIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEALRLVKQMEGLG 75
+I L K + A F + D D ++Y LI G EA+ + K+ME G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 76 YAPNVYTYTILIDGFCN-AKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKA 134
P + TY ++++ F ++ ++E MK + P+ T +L+ R +A
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 135 FELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTC 194
++ K+ N LL + EA +L +M G+ P T++ ++
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 195 LVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSN 254
L+E + + ++G KP TY L+ +AG+ + N
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Query: 255 VNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLV 314
+ ++N I + +I E+ ++P++VT+NTL++ ++ + +
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478
Query: 315 MLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIG 374
+ GF P++ TFN++I R FE A+ M++ GV P+ TYN ++ +L G
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Query: 375 DVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYS 434
+S ++ +M+ R P+ T+ +L+ ++ +I + + + P
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK 598
Query: 435 ALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKER 494
L+ K EA++ F +++ G +PD T N ++ ++ +A+ ++ KER
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER 658
Query: 495 GIS 497
G +
Sbjct: 659 GFT 661
Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 175/394 (44%), Gaps = 15/394 (3%)
Query: 115 EATVRSLVHGVFRCLDPHKAFELLIR----FMEREPLTQKL---VCNTLLYRLSNNSMAS 167
E+T L+ + L HK F+L +R FM+++ L V ++ L S
Sbjct: 132 ESTSSELL-AFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVS 190
Query: 168 EAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLM 227
AA + + + G+ + ++ ++ E + + G KP TY +++
Sbjct: 191 SAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVIL 250
Query: 228 EALYKAGRDVEGDRYLNHVFK-DRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDI 286
K G L K D + + +YN +I C + ++ A ++ EM+
Sbjct: 251 NVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGF 310
Query: 287 APNLVTFNTLISGHCKDAEVHKTRELLVMLLEC---GFKPDKFTFNSMIDCLCRAHRFED 343
+ + VT+N L+ + K H+ +E + +L E GF P T+NS+I R ++
Sbjct: 311 SYDKVTYNALLDVYGKS---HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDE 367
Query: 344 ALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQ 403
A++ ++M E G P+ TY L+ G V ++ +F++M+ P+I TFNA I+
Sbjct: 368 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 427
Query: 404 SFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNP 463
+ K + K F + GL PD +++ L+ ++G E F M++ G P
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 487
Query: 464 DSYTSNLILETLVQQGRFEEAHDIVKTSKERGIS 497
+ T N ++ + G FE+A + + + G++
Sbjct: 488 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVT 521
Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 125/316 (39%), Gaps = 70/316 (22%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICR------- 57
G++P YN V+ AL + + + +M +CKP+ TY L+H
Sbjct: 519 GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLM 578
Query: 58 --------IGVVD--------------------EALRLVKQMEGLGYAPNVYTYTILIDG 89
GV++ EA R +++ G++P++ T ++
Sbjct: 579 HSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSI 638
Query: 90 FCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQ 149
+ + VA+ VL+ MKER P+ AT SL++ R D K+ E+L + +
Sbjct: 639 YGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698
Query: 150 KLVCNTLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILD 209
+ NT++Y N+ +A+ I +M + G +P+ T++ + E G++
Sbjct: 699 IISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVR 758
Query: 210 TFIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVN 269
IK G +P N N+YN ++D +CK+N
Sbjct: 759 YMIKHGCRP-----------------------------------NQNTYNSIVDGYCKLN 783
Query: 270 MMDRATEICREMRDRD 285
D A ++R+ D
Sbjct: 784 RKDEAKLFVEDLRNLD 799
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 16/199 (8%)
Query: 302 KDAEVHKTRELLVMLLECGFKPDKFTFN-SMIDCLCRAHRFEDALDCLSEMVEWGVPPNT 360
KD + ELL L GF KF D + ++ LD N+
Sbjct: 128 KDKPESTSSELLAFLKGLGFH-KKFDLALRAFDWFMKQKDYQSMLD------------NS 174
Query: 361 ITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFS 420
+ I+I L G V+ + +F +Q D S D+Y++ +LI +F + +A F
Sbjct: 175 VV-AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKK 233
Query: 421 MLTLGLRPDNFSYSALIKALIKSGR-FDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQG 479
M G +P +Y+ ++ K G +++ M+ +G PD+YT N ++ +
Sbjct: 234 MEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGS 293
Query: 480 RFEEAHDIVKTSKERGISF 498
+EA + + K G S+
Sbjct: 294 LHQEAAQVFEEMKAAGFSY 312
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 56/140 (40%), Gaps = 20/140 (14%)
Query: 5 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGICRIGVVDEA 64
GI P YN VI A ++ + A F +M PD TYN I + +EA
Sbjct: 694 GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEA 753
Query: 65 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 124
+ +V+ M G PN TY ++DG+C R E +E +
Sbjct: 754 IGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL------------------ 795
Query: 125 VFRCLDPHKAFELLIRFMER 144
R LDPH +R +ER
Sbjct: 796 --RNLDPHAPKGEDLRLLER 813
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 172,982,942
Number of Sequences: 539616
Number of extensions: 6793190
Number of successful extensions: 31257
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 19644
Number of HSP's gapped (non-prelim): 3880
length of query: 504
length of database: 191,569,459
effective HSP length: 122
effective length of query: 382
effective length of database: 125,736,307
effective search space: 48031269274
effective search space used: 48031269274
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)