BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>048265
MATQYKDSQRILLQYVNVQVAVFYFHDEFTWLRGFGLFTILVGVSLFNWYKYQKLQAGHA
NEDGMLGSPEANASAKYVILEEIDDLDEGT

High Scoring Gene Products

Symbol, full name Information P value
AT1G06470 protein from Arabidopsis thaliana 2.0e-19

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  048265
        (90 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2009190 - symbol:AT1G06470 species:3702 "Arabi...   236  2.0e-19   1


>TAIR|locus:2009190 [details] [associations]
            symbol:AT1G06470 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0016020 "membrane"
            evidence=IEA;ISS] [GO:0006863 "purine nucleobase transport"
            evidence=RCA] InterPro:IPR000620 Pfam:PF00892 Pfam:PF03151
            GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007592
            GO:GO:0008643 eggNOG:COG0697 InterPro:IPR004853 EMBL:BT000433
            EMBL:BT003372 IPI:IPI00536087 PIR:E86200 RefSeq:NP_172135.2
            RefSeq:NP_973772.1 UniGene:At.42340 PRIDE:Q8H184
            EnsemblPlants:AT1G06470.1 EnsemblPlants:AT1G06470.2 GeneID:837159
            KEGG:ath:AT1G06470 TAIR:At1g06470 HOGENOM:HOG000070506
            InParanoid:Q8H184 KO:K15280 OMA:TELNICG PhylomeDB:Q8H184
            ProtClustDB:CLSN2690738 Genevestigator:Q8H184 Uniprot:Q8H184
        Length = 414

 Score = 236 (88.1 bits), Expect = 2.0e-19, P = 2.0e-19
 Identities = 45/76 (59%), Positives = 57/76 (75%)

Query:    11 ILLQYVNVQVAVFYFHDEFTWLRGFGLFTILVGVSLFNWYKYQKLQAGH-ANEDGMLGSP 69
             ++ + V + VAVFYFHDEFTWL+G GL  I+VGVSLFNWYKY KLQ GH   E+  L +P
Sbjct:   336 VVKEAVTIVVAVFYFHDEFTWLKGVGLMIIMVGVSLFNWYKYDKLQKGHKTEEEKQLQAP 395

Query:    70 EANASAKYVILEEIDD 85
               + + KYVIL+E+DD
Sbjct:   396 --SQTGKYVILDEMDD 409


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.138   0.416    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       90        90   0.00091  102 3  11 22  0.46    29
                                                     29  0.39    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  529 (56 KB)
  Total size of DFA:  112 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.50u 0.17s 9.67t   Elapsed:  00:00:01
  Total cpu time:  9.50u 0.17s 9.67t   Elapsed:  00:00:01
  Start:  Mon May 20 22:06:02 2013   End:  Mon May 20 22:06:03 2013

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