BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 048265
         (90 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8H184|PT106_ARATH Probable sugar phosphate/phosphate translocator At1g06470
           OS=Arabidopsis thaliana GN=At1g06470 PE=2 SV=1
          Length = 414

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/76 (59%), Positives = 57/76 (75%), Gaps = 3/76 (3%)

Query: 11  ILLQYVNVQVAVFYFHDEFTWLRGFGLFTILVGVSLFNWYKYQKLQAGH-ANEDGMLGSP 69
           ++ + V + VAVFYFHDEFTWL+G GL  I+VGVSLFNWYKY KLQ GH   E+  L +P
Sbjct: 336 VVKEAVTIVVAVFYFHDEFTWLKGVGLMIIMVGVSLFNWYKYDKLQKGHKTEEEKQLQAP 395

Query: 70  EANASAKYVILEEIDD 85
             + + KYVIL+E+DD
Sbjct: 396 --SQTGKYVILDEMDD 409


>sp|Q9HEC9|SEC16_NEUCR COPII coat assembly protein sec-16 OS=Neurospora crassa (strain ATCC
            24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
            GN=sec-16 PE=3 SV=1
          Length = 2084

 Score = 31.2 bits (69), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 49   WYKYQKLQAGHANEDGMLGSPEA 71
            W ++ K  AG  NEDG  GSP+A
Sbjct: 1526 WNRFNKFVAGDDNEDGSKGSPDA 1548


>sp|Q10354|YDB1_SCHPO Uncharacterized transporter C22E12.01 OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=SPAC22E12.01 PE=3 SV=2
          Length = 374

 Score = 30.4 bits (67), Expect = 3.8,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 11/72 (15%)

Query: 11  ILLQYVNVQVAVFYFHDEFTWLRGFGLFTILVGVSLFNWYKYQKLQAGHANEDGMLGSPE 70
           IL + + +  +  ++HD    +   GL   L G+ ++N+Y+  K      N+       E
Sbjct: 312 ILKEIITIIASTLFYHDILLPINIVGLVITLCGIGVYNYYRITK-----GNKK------E 360

Query: 71  ANASAKYVILEE 82
           A    +Y++L E
Sbjct: 361 AEKEVEYIVLNE 372


>sp|Q9M1E2|PTR37_ARATH Nitrate excretion transporter 1 OS=Arabidopsis thaliana GN=NAXT1
           PE=1 SV=1
          Length = 558

 Score = 29.6 bits (65), Expect = 6.1,   Method: Composition-based stats.
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 6/40 (15%)

Query: 21  AVFYFHDEFTWLRGFGL------FTILVGVSLFNWYKYQK 54
           A+ Y  D  +W  GFGL      F+ LV VS   +YK+ K
Sbjct: 196 AIVYTEDNISWTLGFGLSVAANFFSFLVFVSGKRFYKHDK 235


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.322    0.138    0.416 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,790,014
Number of Sequences: 539616
Number of extensions: 1194765
Number of successful extensions: 2096
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2091
Number of HSP's gapped (non-prelim): 6
length of query: 90
length of database: 191,569,459
effective HSP length: 60
effective length of query: 30
effective length of database: 159,192,499
effective search space: 4775774970
effective search space used: 4775774970
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)