Your job contains 1 sequence.
>048268
MSLWGQLSKILRNSFPLCDNERSQIARVVFKDPQGAETAVLLSGATIVDQSVTIELDPDY
KPPATASVTSTARENKNEGGTESVVHKAEDVVSTMLAKGFILGKDAVGKAKAFDEKHRFT
STATATVASLDQKIGFTEKISAGTTLVNDKVREMDEKFHVSEKTKSAFSAAEQTVSNAGS
AIMKNRYVLTGASWVTGAFNRVTKAAGEVSEKTREKVLAEEEETRKADGYSQVSDTEFPR
SAAN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048268
(244 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2129401 - symbol:AT4G17720 species:3702 "Arabi... 701 3.8e-69 1
TAIR|locus:2172947 - symbol:AT5G46870 species:3702 "Arabi... 690 5.6e-68 1
TAIR|locus:2148970 - symbol:BPA1 "binding partner of acd1... 681 5.1e-67 1
TAIR|locus:2200211 - symbol:AT1G67950 species:3702 "Arabi... 461 1.0e-43 1
TAIR|locus:2145806 - symbol:AT5G32450 species:3702 "Arabi... 436 4.6e-41 1
TAIR|locus:2012567 - symbol:AT1G14340 species:3702 "Arabi... 333 3.8e-30 1
TAIR|locus:2102067 - symbol:AT3G01210 species:3702 "Arabi... 284 5.9e-25 1
ASPGD|ASPL0000008076 - symbol:AN6004 species:162425 "Emer... 141 1.0e-07 1
DICTYBASE|DDB_G0291155 - symbol:DDB_G0291155 "RNA-binding... 124 1.7e-05 1
>TAIR|locus:2129401 [details] [associations]
symbol:AT4G17720 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009627 "systemic acquired
resistance" evidence=RCA] [GO:0034976 "response to endoplasmic
reticulum stress" evidence=RCA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005829 EMBL:CP002687 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 HOGENOM:HOG000240366 ProtClustDB:PLN03120
EMBL:AY087960 EMBL:BT004039 EMBL:BT005158 IPI:IPI00541468
RefSeq:NP_567536.1 UniGene:At.32973 ProteinModelPortal:Q8LA96
SMR:Q8LA96 IntAct:Q8LA96 STRING:Q8LA96 PRIDE:Q8LA96
EnsemblPlants:AT4G17720.1 GeneID:827493 KEGG:ath:AT4G17720
TAIR:At4g17720 InParanoid:Q8LA96 OMA:IEHVEMQ PhylomeDB:Q8LA96
Genevestigator:Q8LA96 Uniprot:Q8LA96
Length = 313
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 146/230 (63%), Positives = 185/230 (80%)
Query: 19 DNERSQIARVVFKDPQGAETAVLLSGATIVDQSVTIELDPDYK--PPATASVTSTARENK 76
+ ER+++A V FKD QGAETAVLLSGATIVD SV + + PDY+ P A AS+ NK
Sbjct: 38 ETERTKLAYVTFKDLQGAETAVLLSGATIVDSSVIVSMAPDYQLSPEALASL-EPKDSNK 96
Query: 77 NEGGTESVVHKAEDVVSTMLAKGFILGKDAVGKAKAFDEKHRFTSTATATVASLDQKIGF 136
+ +SV+ KAEDVVS+MLAKGFILGKDA+ KAK+ DEKH+ TSTA+A VAS D+KIGF
Sbjct: 97 SPKAGDSVLRKAEDVVSSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGF 156
Query: 137 TEKISAGTTLVNDKVREMDEKFHVSEKTKSAFSAAEQTVSNAGSAIMKNRYVLTGASWVT 196
T+KI+ GT +V +KVRE+D+K+ VSEKTKSA +AAEQTVSNAGSAIMKNRYVLTGA+WVT
Sbjct: 157 TDKINTGTVVVGEKVREVDQKYQVSEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVT 216
Query: 197 GAFNRVTKAAGEVSEKTREKV-LAEEEETRKA-DGYSQVSDTEFPRSAAN 244
GAFN+V KAA EV +K +EKV +AEEE+ RK D +++V +E P++A++
Sbjct: 217 GAFNKVAKAAEEVGQKAKEKVGMAEEEDKRKVVDEFARVHLSESPKAASS 266
>TAIR|locus:2172947 [details] [associations]
symbol:AT5G46870 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG67475
HOGENOM:HOG000240366 ProtClustDB:PLN03120 EMBL:BT010766
EMBL:BT011793 IPI:IPI00527393 RefSeq:NP_199498.2 UniGene:At.29926
ProteinModelPortal:Q6NM69 SMR:Q6NM69 PaxDb:Q6NM69 PRIDE:Q6NM69
EnsemblPlants:AT5G46870.1 GeneID:834731 KEGG:ath:AT5G46870
TAIR:At5g46870 InParanoid:Q6NM69 OMA:AQANISE PhylomeDB:Q6NM69
Genevestigator:Q6NM69 Uniprot:Q6NM69
Length = 295
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 146/232 (62%), Positives = 182/232 (78%)
Query: 19 DNERSQIARVVFKDPQGAETAVLLSGATIVDQSVTIELDPDYK-PP-ATASVTSTARENK 76
+N+ S++A V FKD QGAETAVLL+G+TIVD SVT+ + PDY+ PP A AS+ S NK
Sbjct: 38 ENDGSKLAYVTFKDLQGAETAVLLTGSTIVDSSVTVTMSPDYQLPPDALASIESLKESNK 97
Query: 77 NEGGTE---SVVHKAEDVVSTMLAKGFILGKDAVGKAKAFDEKHRFTSTATATVASLDQK 133
+ T SV KAEDVVS M++KGF+LGKDA+ KAK+ DEKH+ TSTA+A V S D++
Sbjct: 98 SSSPTREDVSVFRKAEDVVSGMISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKR 157
Query: 134 IGFTEKISAGTTLVNDKVREMDEKFHVSEKTKSAFSAAEQTVSNAGSAIMKNRYVLTGAS 193
IGFTEKI+ GTT+V++KV+E+D+KF V+EKTKSA +AAEQTVSNAGSAIMKNRYVLTGA+
Sbjct: 158 IGFTEKINTGTTVVSEKVKEVDQKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGAT 217
Query: 194 WVTGAFNRVTKAAGEVSEKTREKV-LAEEEETRK---ADGYSQVSDTEFPRS 241
WVTGAFNRV+KAA EV +K +EKV LAEEEE K D + V TE P++
Sbjct: 218 WVTGAFNRVSKAAEEVGQKAKEKVGLAEEEEEEKKKVVDEVAIVHLTESPKA 269
>TAIR|locus:2148970 [details] [associations]
symbol:BPA1 "binding partner of acd11 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:CP002688 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL391147 UniGene:At.49030
IPI:IPI00846971 RefSeq:NP_001078595.1 SMR:A8MSB5 IntAct:A8MSB5
STRING:A8MSB5 EnsemblPlants:AT5G16840.2 GeneID:831547
KEGG:ath:AT5G16840 TAIR:At5g16840 HOGENOM:HOG000240366 OMA:DERNQIT
ProtClustDB:PLN03120 Genevestigator:A8MSB5 Uniprot:A8MSB5
Length = 260
Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
Identities = 142/228 (62%), Positives = 176/228 (77%)
Query: 20 NERSQIARVVFKDPQGAETAVLLSGATIVDQSVTIELDPDYKPPATASVTSTARENKNEG 79
NE S A V FK+ QGAETAVLLSGA+I DQSV IEL P+Y PPA + +
Sbjct: 41 NEHS--AYVTFKETQGAETAVLLSGASIADQSVIIELAPNYSPPAAPHAETQS------S 92
Query: 80 GTESVVHKAEDVVSTMLAKGFILGKDAVGKAKAFDEKHRFTSTATATVASLDQKIGFTEK 139
G ESVV KAEDVVS+MLAKGFILGKDAVGKAKAFDEKH FTSTATA VASLDQKIG ++K
Sbjct: 93 GAESVVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQK 152
Query: 140 ISAGTTLVNDKVREMDEKFHVSEKTKSAFSAAEQTVSNAGSAIMKNRYVLTGASWVTGAF 199
++AGT+LVN+K++ +D+ F V+E+TKS ++AAEQTVS+AGSA+MKNRYVLTG SW GAF
Sbjct: 153 LTAGTSLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAF 212
Query: 200 NRVTKAAGEVSEKTREKVLAEE------EETRKADGYSQVSDTEFPRS 241
NRV +AAGEV +KT+EKV AE+ + + +GYS + +E+ ++
Sbjct: 213 NRVAQAAGEVGQKTKEKVEAEQPSQPAQSQQQLPEGYSPIHSSEYSKN 260
>TAIR|locus:2200211 [details] [associations]
symbol:AT1G67950 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:CP002684 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 UniGene:At.27658 UniGene:At.48348
IPI:IPI00517486 RefSeq:NP_849859.1 UniGene:At.66987
ProteinModelPortal:F4HVJ0 SMR:F4HVJ0 PRIDE:F4HVJ0
EnsemblPlants:AT1G67950.3 GeneID:843123 KEGG:ath:AT1G67950
PhylomeDB:F4HVJ0 Uniprot:F4HVJ0
Length = 279
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 99/198 (50%), Positives = 138/198 (69%)
Query: 19 DNERSQIARVVFKDPQGAETAVLLSGATIVDQSVTIELDPDYK-PPATASVTSTARENKN 77
+ + SQ+A V FKD QGAETA+LL+GA I D V+I +Y+ PP ++ S +E+
Sbjct: 63 ETQESQVAYVTFKDSQGAETAMLLTGAVIADLRVSITPAVNYQLPPEALALDS--QEHSF 120
Query: 78 EGGTESVVHKAEDVVSTMLAKGFILGKDAVGKAKAFDEKHRFTSTATATVASLDQKIGFT 137
G + V KAEDVV+ M+ +G+ LGKDA+ KAKAFD++H S A+AT+ASLD K+G +
Sbjct: 121 NGFS---VKKAEDVVNIMVGRGYALGKDAMEKAKAFDDRHNLISNASATIASLDDKMGLS 177
Query: 138 EKISAGTTLVNDKVREMDEKFHVSEKTKSAFSAAEQTVSNAGSAIMKNRYVLTGASWVTG 197
EK+S GTT+VN+K+R++DE++ V E TKSA +AAE+T +A +A+M N YV +GASW +
Sbjct: 178 EKLSIGTTVVNEKLRDIDERYQVREITKSALAAAEETAISARTALMANPYVSSGASWFSN 237
Query: 198 AFNRVTKAAGEVSEKTRE 215
AF VTKA E E E
Sbjct: 238 AFGAVTKAVKEKVENGGE 255
>TAIR|locus:2145806 [details] [associations]
symbol:AT5G32450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA;ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 OMA:HQLRANA HOGENOM:HOG000240366
ProtClustDB:PLN03120 EMBL:AY088345 EMBL:BT005606 EMBL:AK117709
IPI:IPI00531330 RefSeq:NP_568522.1 UniGene:At.30677
ProteinModelPortal:Q8L9M9 SMR:Q8L9M9 PaxDb:Q8L9M9 PRIDE:Q8L9M9
EnsemblPlants:AT5G32450.1 GeneID:833204 KEGG:ath:AT5G32450
TAIR:At5g32450 eggNOG:NOG266850 InParanoid:Q8L9M9 PhylomeDB:Q8L9M9
ArrayExpress:Q8L9M9 Genevestigator:Q8L9M9 Uniprot:Q8L9M9
Length = 267
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 96/209 (45%), Positives = 137/209 (65%)
Query: 22 RSQIARVVFKDPQGAETAVLLSGATIVDQSVTIELDPDY-KPPATASVT----------- 69
+S+IA V F DP+ E A+LLSGATIVDQ VTI +Y + T V
Sbjct: 42 QSRIAFVTFTDPKALEIALLLSGATIVDQIVTITRAENYVQRRETQEVRMLDNAMPLGLQ 101
Query: 70 -STARENKN-EGGTESVVHKAEDVVSTMLAKGFILGKDAVGKAKAFDEKHRFTSTATATV 127
ST + N +G + + V KA+DVV+T+LAKG LG+DAV KAKAFDEKH+ + A+A V
Sbjct: 102 ESTTQTKTNMDGNSRAYVSKAQDVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKV 161
Query: 128 ASLDQKIGFTEKISAGTTLVNDKVREMDEKFHVSEKTKSAFSAAEQTVSNAGSAIMKNRY 187
+S D+++G TEK+S G + VN+KV+ +D+K VS+KT +A AAE+ +++ GSA+ +RY
Sbjct: 162 SSFDKRVGLTEKLSVGISAVNEKVKSVDQKLQVSDKTMAAIFAAERKLNDTGSAVKSSRY 221
Query: 188 VLTGASWVTGAFNRVTKAAGEVSEKTREK 216
V GA+W +GAF++V + KT+EK
Sbjct: 222 VTAGAAWFSGAFSKVARVGQVAGSKTKEK 250
>TAIR|locus:2012567 [details] [associations]
symbol:AT1G14340 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA;ISS] [GO:0006301 "postreplication
repair" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 InterPro:IPR001395 EMBL:CP002684
GO:GO:0000166 PANTHER:PTHR11732 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AY050919 EMBL:AY091417 IPI:IPI00519707 RefSeq:NP_563946.1
UniGene:At.26546 ProteinModelPortal:Q949S4 SMR:Q949S4 IntAct:Q949S4
PRIDE:Q949S4 DNASU:837995 EnsemblPlants:AT1G14340.1 GeneID:837995
KEGG:ath:AT1G14340 TAIR:At1g14340 InParanoid:Q949S4 OMA:SADECAC
PhylomeDB:Q949S4 ProtClustDB:PLN03121 ArrayExpress:Q949S4
Genevestigator:Q949S4 Uniprot:Q949S4
Length = 244
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 80/202 (39%), Positives = 119/202 (58%)
Query: 21 ERSQIARVVFKDPQGAETAVLLSGATIVDQSVTI-ELDPDYKPPATASVTSTAREN---- 75
E++ A V+FKD ETAVLL+GATI+DQ V I ++ + TS E+
Sbjct: 43 EQACTAYVMFKDSYSQETAVLLTGATILDQRVCITRWGQHHEEFDFWNATSRGFEDESDS 102
Query: 76 -----KNEGGTESVVHKAEDVVSTMLAKGFILGKDAVGKAKAFDEKHRFTSTATATVASL 130
++E V KA++VV MLA GF+LGKDA+ KAKAFDE H ++ A A V+ L
Sbjct: 103 QHYAQRSEFNAGEAVTKAQEVVKIMLATGFVLGKDALSKAKAFDESHGVSAAAVARVSQL 162
Query: 131 DQKIGFTEKISAGTTLVNDKVREMDEKFHVSEKTKSAFSAAEQTVSNAGSAIMKNRYVLT 190
+Q+IG T+KI G + VR D+++HVS+ KSA A +T + A ++++ + Y +
Sbjct: 163 EQRIGLTDKIFTGL----EAVRMTDQRYHVSDTAKSAVFATGRTAAAAATSVVNSSYFSS 218
Query: 191 GASWVTGAFNRVTKAAGEVSEK 212
GA W++GA R KAA ++ +
Sbjct: 219 GALWLSGALERAAKAASDLGTR 240
>TAIR|locus:2102067 [details] [associations]
symbol:AT3G01210 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] InterPro:IPR000504 InterPro:IPR012677
SMART:SM00360 EMBL:CP002686 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC008261 HOGENOM:HOG000240366
ProtClustDB:PLN03121 IPI:IPI00544146 RefSeq:NP_186770.3
UniGene:At.41315 ProteinModelPortal:Q9MAD0 SMR:Q9MAD0
EnsemblPlants:AT3G01210.1 GeneID:821275 KEGG:ath:AT3G01210
TAIR:At3g01210 InParanoid:Q9MAD0 OMA:LAEISHY PhylomeDB:Q9MAD0
Genevestigator:Q9MAD0 Uniprot:Q9MAD0
Length = 249
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 76/202 (37%), Positives = 105/202 (51%)
Query: 26 ARVVFKDPQGAETAVLLSGATIVDQSVTIELDPDY-------KPPATASVTSTARENKNE 78
A V F+D + AVLLSGATIVDQ+V I + Y + SVT T R +
Sbjct: 47 AYVTFRDAYALDMAVLLSGATIVDQTVWISVYGVYLHESNNLRQEEDYSVTVT-RSDAFA 105
Query: 79 GGTESVVHKAEDVVSTMLAKGFILGKDAVGKAKAFDEKHRFTSTATATVASLDQKIGFTE 138
+ A+ VV TMLAKG++L KDA+GKAKA DE RF+S +A + +G T+
Sbjct: 106 SSPGEAITVAQQVVQTMLAKGYVLSKDAIGKAKALDESQRFSSLVATKLAEISHYLGLTQ 165
Query: 139 KISAGTTLVNDKVREMDEKFHVSEKTKSAF------SAAEQTVSN-----AGSAIMKNRY 187
I + LV R DEK+H S+ TKSA + A T++ A ++++ +RY
Sbjct: 166 NIQSSMELV----RSADEKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRY 221
Query: 188 VLTGASWVTGAFNRVTKAAGEV 209
GA W + A R KAA +
Sbjct: 222 FANGALWFSDALGRAAKAAAHI 243
>ASPGD|ASPL0000008076 [details] [associations]
symbol:AN6004 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:BN001301 EMBL:AACD01000102 eggNOG:NOG67475
HOGENOM:HOG000163072 OrthoDB:EOG4C5GTR RefSeq:XP_663608.1
ProteinModelPortal:Q5B0C6 EnsemblFungi:CADANIAT00007014
GeneID:2871044 KEGG:ani:AN6004.2 OMA:HQLRANA Uniprot:Q5B0C6
Length = 270
Score = 141 (54.7 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 51/207 (24%), Positives = 93/207 (44%)
Query: 26 ARVVFKDPQGAETAVLLSGATIVDQSVTIELDPDYKPPATA-SVTSTARENKNEGGTESV 84
A V F+ A+TA+LL + VT++ A S T+ +++N+ E
Sbjct: 49 ATVTFEKDAAAKTALLLDQTQLGPSVVTVKAAQTLDEIAGEHSATAAEAKDENQNDLEQE 108
Query: 85 VHKAEDVVSTMLAKGFILGKDAVGKAKAFDEKHRFTSTATATVASLDQKIGFTEKISAGT 144
+++ LA G+ + A+ KA A D+KH FTS T+ +++ D+K G +E+
Sbjct: 109 DKPRSRIIAEYLAHGYTISDQAIQKAIAIDKKHGFTSRFTSVLSNFDKKTGASER----- 163
Query: 145 TLVNDKVREMDEKFHVSEKTKSAF----SAAEQTVSNAGSAIMKNRYVLTGASWVTGAFN 200
+ +DE + +S+K +++ S E+ ++ +++ Y T V
Sbjct: 164 ------AKGLDESYKISDKAANSWRGLHSYFEKAINTPSGRKLRDFYSQTDKQ-VRDIHA 216
Query: 201 RVTKAAGEVSEKTREKVLAEEEETRKA 227
+ A + KT EK AE E + A
Sbjct: 217 EARRLADLKAGKTEEKK-AEGESSSPA 242
>DICTYBASE|DDB_G0291155 [details] [associations]
symbol:DDB_G0291155 "RNA-binding region RNP-1
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 dictyBase:DDB_G0291155 GO:GO:0045335 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AAFI02000175 eggNOG:NOG67475
OMA:GETKSAT RefSeq:XP_635364.1 ProteinModelPortal:Q54F26
PRIDE:Q54F26 EnsemblProtists:DDB0233343 GeneID:8628012
KEGG:ddi:DDB_G0291155 InParanoid:Q54F26 ProtClustDB:CLSZ2728766
Uniprot:Q54F26
Length = 311
Score = 124 (48.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 38/154 (24%), Positives = 70/154 (45%)
Query: 91 VVSTMLAKGFILGKDAVGKAKAFDEKHRFT-------STATATVASLDQKIGFTEKISAG 143
VV++++A G+ +G+DA KA+ DE+H + A +D + +E +A
Sbjct: 135 VVASIIAAGYSVGQDAAIKARQVDEEHMISLKLKVGAEAVKAKANEIDNNLHISESAAAI 194
Query: 144 TTLVNDKVREMDEKFHVSEKTKSAFSAAEQTVSNAGSAIMKNRYVLTGASWVTGAFNRVT 203
V ++ +DE+F +S KSA Q SN A +N V + V+ +
Sbjct: 195 KGAVVERANALDERFQISGFFKSASDMISQQASNLMKAAEENSTVSPIVNKVSSFGTFIK 254
Query: 204 KAAGEVSEKTREKVLAEEEETRKADGYSQVSDTE 237
+ ++ +T + + +E K G + +DTE
Sbjct: 255 QEVQQIQTETSQAI----DEKNKEKGINSSNDTE 284
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.309 0.123 0.331 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 244 244 0.00098 113 3 10 23 0.38 34
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 615 (65 KB)
Total size of DFA: 230 KB (2126 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.64u 0.13s 31.77t Elapsed: 00:00:01
Total cpu time: 31.64u 0.13s 31.77t Elapsed: 00:00:01
Start: Fri May 10 19:04:03 2013 End: Fri May 10 19:04:04 2013